HHsearch alignment for GI: 255764505 and conserved domain: cd04801
>cd04801 CBS_pair_M50_like This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the metalloprotease peptidase M50. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.74 E-value=2.9e-17 Score=146.03 Aligned_cols=110 Identities=25% Similarity=0.310 Sum_probs=102.5
Q ss_pred CCEEEEEHHHHHHHHHH-HHCCCCCEEEECCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHCC--CCCEEECCCCCHHHH
Q ss_conf 43055100238888987-410466200000043232324123403567617823370988348--897897799878999
Q gi|255764505|r 229 SIPLVKIGCPLIDAITI-LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI--KNPKVILEDTLLTVA 305 (341)
Q Consensus 229 ~ip~V~~~~si~eal~~-m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~~~~~~~v~~iMt--~~p~~I~~d~~i~eA 305 (341)
T Consensus 2 dv~tv~~~~tl~e~~~~~~~~~~~~~~pVvd~~g~l~Givt~~dl~~~~~~~~~~~~v~~v~~~~~~~~~v~~~~~l~~a 81 (114)
T cd04801 2 DFPTVPAHLTLREFVREYVLGSNQRRFVVVDNEGRYVGIISLADLRAIPTSQWAQTTVIQVMTPAAKLVTVLSEESLAEV 81 (114)
T ss_pred CCEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCHHHHCCCCCCCEEECCCCCHHHH
T ss_conf 95584999959999999985079668999878997999999999875454025688477821027787589999979999
Q ss_pred HHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf 999996799589998069848999858889743
Q gi|255764505|r 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338 (341)
Q Consensus 306 l~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka 338 (341)
T Consensus 82 l~~m~~~~~~~LpVVd~~g~lvGiit~~Dilrr 114 (114)
T cd04801 82 LKLLEEQGLDELAVVEDSGQVIGLITEADLLRR 114 (114)
T ss_pred HHHHHHCCCCEEEEECCCCEEEEEEEHHHHHCC
T ss_conf 999997698678899479909999997884368