HHsearch alignment for GI: 255764505 and conserved domain: cd04803
>cd04803 CBS_pair_15 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=98.39 E-value=1.1e-06 Score=68.90 Aligned_cols=56 Identities=38% Similarity=0.609 Sum_probs=51.8
Q ss_pred HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHH
Q ss_conf 4333332104754305510023888898741046620000004323232412340356
Q gi|255764505|r 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274 (341)
Q Consensus 217 Ll~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR 274 (341)
T Consensus 66 ~~~v~~im~~--~~~tv~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGiiT~~Dilk 121 (122)
T cd04803 66 DVPVAEVMKT--DVLTVTPDTPLREAAEIMVENKIGCLPVVDDKGTLVGIITRSDFLR 121 (122)
T ss_pred CCCHHHHCCC--CCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHEEE
T ss_conf 8899996689--9869989998999999998568509999947998999999515564