HHsearch alignment for GI: 255764505 and conserved domain: cd05006
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=99.61 E-value=3.5e-14 Score=123.59 Aligned_cols=135 Identities=24% Similarity=0.311 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHC---CCCEEEEECCCHHHHHHHHHHHHHH------CCCCCCCCCCC----CHHHHCCC---------
Q ss_conf 36699999999827---9959999338137999999999875------08861101233----02320230---------
Q gi|255764505|r 50 SFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLAS------TGTPSFFVHAA----EASHGDLG--------- 107 (341)
Q Consensus 50 ~~~~~~av~~i~~~---~grv~~~GvG~S~~ia~k~a~tl~s------~G~~a~~~~~~----ea~Hgdlg--------- 107 (341)
T Consensus 16 ~~~i~~~~~~i~~~~~~g~kI~~~GNGgSa~~A~H~a~dl~~~~~~~r~~l~aisL~~~~~~~ta~~ND~~~~~if~~ql 95 (177)
T cd05006 16 AEAIEQAAQLLAEALLNGGKILICGNGGSAADAQHFAAELVKRFEKERPGLPAIALTTDTSILTAIANDYGYEEVFSRQV 95 (177)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 89999999999999987998999968740888999999873576668887017976787788888756532999999999
Q ss_pred --EEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf --121047078983687807887666663204562799844788954521453376886155432475217899999999
Q gi|255764505|r 108 --MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185 (341)
Q Consensus 108 --~i~~~Dv~i~iS~SG~t~e~~~~~~~~k~~~~~iI~iT~~~~S~la~~ad~~l~~~~~~Ea~~~~~aPt~Stt~~l~~ 185 (341)
T Consensus 96 ~~~~~~gDili~iS~sG~s~nii~a~~~ak~~g~~~i~ltg~~gg~l~~~~D~~i~vps~~--------~~~vee~Hl~i 167 (177)
T cd05006 96 EALGQPGDVLIGISTSGNSPNVLKALEAAKERGMKTIALTGRDGGKLLELADIEIHVPSDD--------TPRIQEVHLLI 167 (177)
T ss_pred HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCEEEEECCCC--------CHHHHHHHHHH
T ss_conf 9744689889998189999899999999998799899998789861676199899969998--------58999999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|255764505|r 186 GDALAIA 192 (341)
Q Consensus 186 ~Dalav~ 192 (341)
T Consensus 168 ~H~l~~~ 174 (177)
T cd05006 168 GHILCEL 174 (177)
T ss_pred HHHHHHH
T ss_conf 9999998