HHsearch alignment for GI: 255764505 and conserved domain: cd05013
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=99.83 E-value=1e-19 Score=163.83 Aligned_cols=137 Identities=30% Similarity=0.367 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEECCCEEEEEECCCCCHHHHHHH
Q ss_conf 69999999982799599993381379999999998750886110123302320230121047078983687807887666
Q gi|255764505|r 52 QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131 (341)
Q Consensus 52 ~~~~av~~i~~~~grv~~~GvG~S~~ia~k~a~tl~s~G~~a~~~~~~ea~Hgdlg~i~~~Dv~i~iS~SG~t~e~~~~~ 131 (341)
T Consensus 2 ~i~~~~~~i~~a~-~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sg~~~~~~~~~ 80 (139)
T cd05013 2 ALEKAVDLLAKAR-RIYIFGVGSSGLVAEYLAYKLLRLGKPVVLLSDPHLQLMSAANLTPGDVVIAISFSGETKETVEAA 80 (139)
T ss_pred HHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH
T ss_conf 7999999997599-289998081599999999997258982798796277888874599999999976863637899999
Q ss_pred HHHHCCCCCEEEEECCCCCHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 663204562799844788954521453376886155432475217899999999999999
Q gi|255764505|r 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191 (341)
Q Consensus 132 ~~~k~~~~~iI~iT~~~~S~la~~ad~~l~~~~~~Ea~~~~~aPt~Stt~~l~~~Dalav 191 (341)
T Consensus 81 ~~ak~~g~~ii~IT~~~~s~l~~~ad~~l~~~~~~~--~~~~~~~~s~~~~~~l~d~l~~ 138 (139)
T cd05013 81 EIAKERGAKVIAITDSANSPLAKLADIVLLVSSEEG--DFRSSAFSSRIAQLALIDALFL 138 (139)
T ss_pred HHHHHCCCEEEEEECCCCCHHHHHCCEEEECCCCCC--CCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999986997999979999977996999998288655--5776884999999999999995