HHsearch alignment for GI: 255764505 and conserved domain: cd05014
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=100.00 E-value=1.7e-32 Score=256.87 Aligned_cols=128 Identities=57% Similarity=0.889 Sum_probs=126.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 95999933813799999999987508861101233023202301210470789836878078876666632045627998
Q gi|255764505|r 65 GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144 (341)
Q Consensus 65 grv~~~GvG~S~~ia~k~a~tl~s~G~~a~~~~~~ea~Hgdlg~i~~~Dv~i~iS~SG~t~e~~~~~~~~k~~~~~iI~i 144 (341)
T Consensus 1 GRI~~~GvG~S~~va~~~~~kl~r~G~~s~~~~~~~~~~~~~~~i~~~Dv~i~iS~SG~T~e~~~~~~~ak~~g~~vI~i 80 (128)
T cd05014 1 GKVVVTGVGKSGHIARKIAATLSSTGTPAFFLHPTEALHGDLGMVTPGDVVIAISNSGETDELLNLLPHLKRRGAPIIAI 80 (128)
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 94999942679999999999999579945754731555411347789999999979999867999999998637858999
Q ss_pred ECCCCCHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 447889545214533768861554324752178999999999999999
Q gi|255764505|r 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192 (341)
Q Consensus 145 T~~~~S~la~~ad~~l~~~~~~Ea~~~~~aPt~Stt~~l~~~Dalav~ 192 (341)
T Consensus 81 T~~~~S~La~~ad~~l~~~~~eE~~~~~~~at~Sr~aqL~i~D~L~ia 128 (128)
T cd05014 81 TGNPNSTLAKLSDVVLDLPVEEEACPLGLAPTTSTTAMLALGDALAVA 128 (128)
T ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 879999679968989977998657777874789999999999999859