RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|255764506|ref|YP_003065297.2| GTP cyclohydrolase I
[Candidatus Liberibacter asiaticus str. psy62]
         (205 letters)



>gnl|CDD|181789 PRK09347, folE, GTP cyclohydrolase I; Provisional.
          Length = 188

 Score =  281 bits (721), Expect = 1e-76
 Identities = 96/190 (50%), Positives = 130/190 (68%), Gaps = 2/190 (1%)

Query: 14  KKPTVEEAKEAIRVILRWIGDDPDREGLKDTPDRVIKSYKELFAGYKQIPTTQDTSRFHF 73
            +P  E+ +EA+R IL  +G+DPDREGL DTP RV K Y+ELF+GY   P  ++     F
Sbjct: 1   NEPDKEKIEEAVREILEALGEDPDREGLLDTPKRVAKMYEELFSGYANDP--KEVLNKTF 58

Query: 74  GEASKYQDMVLIKDISFFSYCEHHILPIWGKIHLAYIPKKHVIGLSKLVRILEVYSRRLQ 133
            E   Y +MVL+KDI+F+S CEHH+LP  GK H+AYIPK  VIGLSK+ RI++ ++RR Q
Sbjct: 59  EEEMGYDEMVLVKDITFYSMCEHHLLPFIGKAHVAYIPKGKVIGLSKIARIVDFFARRPQ 118

Query: 134 IQERLTMQIAHAIESSTDSKGVAVLIEGQHMCMSMRGIKRDGLTTVTTAFTGEFSRDKGK 193
           +QERLT QIA A++     +GVAV+IE +HMCM+MRG+++ G  TVT+A  G F  D   
Sbjct: 119 VQERLTAQIADALQEILGPRGVAVVIEAEHMCMTMRGVRKPGSKTVTSALRGLFKTDPAT 178

Query: 194 TDFFLKMTHN 203
              FL +  +
Sbjct: 179 RAEFLSLIRH 188


>gnl|CDD|129173 TIGR00063, folE, GTP cyclohydrolase I.  GTP cyclohydrolase I (EC
           3.5.4.16) catalyzes the biosynthesis of formic acid and
           dihydroneopterin triphosphate from GTP. This reaction is
           the first step in the biosynthesis of tetrahydrofolate
           in prokaryotes, of tetrahydrobiopterin in vertebrates,
           and of pteridine-containing pigments in insects.
          Length = 180

 Score =  198 bits (506), Expect = 7e-52
 Identities = 89/175 (50%), Positives = 118/175 (67%), Gaps = 3/175 (1%)

Query: 24  AIRVILRWIGDDPDREGLKDTPDRVIKSYKELFAGYKQIPTTQDTSRFHFGEASKYQDMV 83
           A+R IL  IG+D +REGL +TP RV K Y E+F+GY      + T    F E  K+ +MV
Sbjct: 4   AMREILELIGEDLNREGLLETPKRVAKMYVEIFSGYDYANFPKITLAI-FQE--KHDEMV 60

Query: 84  LIKDISFFSYCEHHILPIWGKIHLAYIPKKHVIGLSKLVRILEVYSRRLQIQERLTMQIA 143
           L++DI+F S CEHH++P  GK H+AYIPK  VIGLSK+ RI+E ++RR Q+QERLT QIA
Sbjct: 61  LVRDITFTSTCEHHLVPFDGKAHVAYIPKDKVIGLSKIARIVEFFARRPQVQERLTQQIA 120

Query: 144 HAIESSTDSKGVAVLIEGQHMCMSMRGIKRDGLTTVTTAFTGEFSRDKGKTDFFL 198
            A++   +  GVAV++E  HMCM MRGI++ G  TVT+A  G F  D+     FL
Sbjct: 121 EALQEILEPNGVAVVVEATHMCMKMRGIRKPGSATVTSALGGLFKSDQKTRAEFL 175


>gnl|CDD|183620 PRK12606, PRK12606, GTP cyclohydrolase I; Reviewed.
          Length = 201

 Score =  198 bits (505), Expect = 8e-52
 Identities = 77/184 (41%), Positives = 116/184 (63%), Gaps = 4/184 (2%)

Query: 19  EEAKEAIRVILRWIGDDPDREGLKDTPDRVIKSYKELFAGYKQIPTTQDTSRFHFGEASK 78
              + A+R +L  +G+DPDREGL DTP RV K+ + L  GY+Q P     + F     S 
Sbjct: 20  PALEAAVRELLEALGEDPDREGLLDTPQRVAKAMQYLCDGYEQDPAEALGALF----DSD 75

Query: 79  YQDMVLIKDISFFSYCEHHILPIWGKIHLAYIPKKHVIGLSKLVRILEVYSRRLQIQERL 138
             +MV+++DI  +S CEHH+LP  G  H+AY+P   V+GLSK+ RI+++++RRLQIQE L
Sbjct: 76  NDEMVIVRDIELYSLCEHHLLPFIGVAHVAYLPGGKVLGLSKIARIVDMFARRLQIQENL 135

Query: 139 TMQIAHAIESSTDSKGVAVLIEGQHMCMSMRGIKRDGLTTVTTAFTGEFSRDKGKTDFFL 198
           T QIA A+ + T ++G AV+IE +H+CM MRG+++     +T+   G F       + FL
Sbjct: 136 TRQIATAVVTVTQARGAAVVIEAEHLCMMMRGVRKQNSRMITSVMLGAFRDSAQTRNEFL 195

Query: 199 KMTH 202
           ++  
Sbjct: 196 RLIG 199


>gnl|CDD|178607 PLN03044, PLN03044, GTP cyclohydrolase I; Provisional.
          Length = 188

 Score =  183 bits (467), Expect = 2e-47
 Identities = 85/178 (47%), Positives = 113/178 (63%), Gaps = 4/178 (2%)

Query: 24  AIRVILRWIGDDPDREGLKDTPDRVIKSYKELFAGYKQIPT-TQDTSRFHFGE-ASKYQD 81
           A+R IL  +G+D +REGL DTP RV K+   +  GY Q P     T+ FH  E    +++
Sbjct: 4   AVRTILECLGEDVEREGLLDTPKRVAKALLFMTQGYDQDPEVVLGTALFHEPEVHDGHEE 63

Query: 82  MVLIKDISFFSYCEHHILPIWGKIHLAYIPKKHVI-GLSKLVRILEVYSRRLQIQERLTM 140
           MV+++DI   S CE  ++P  G+IH+ YIP   VI GLSKL RI EVY+RRLQ QERLT 
Sbjct: 64  MVVVRDIDIHSTCEETMVPFTGRIHVGYIPNAGVILGLSKLARIAEVYARRLQTQERLTR 123

Query: 141 QIAHAIESSTDSKGVAVLIEGQHMCMSMRGIKRDGLTTVTTAFTGEF-SRDKGKTDFF 197
           QIA AI  S +  GV V++E  H CM MRG+++ G +T T+A  G F S  K + +FF
Sbjct: 124 QIADAIVESVEPLGVMVVVEAAHFCMVMRGVEKHGASTTTSAVRGCFASNPKLRAEFF 181


>gnl|CDD|185662 PTZ00484, PTZ00484, GTP cyclohydrolase I; Provisional.
          Length = 259

 Score =  180 bits (458), Expect = 2e-46
 Identities = 79/181 (43%), Positives = 111/181 (61%), Gaps = 2/181 (1%)

Query: 11  MKLKKPTVEEAKEAIRVILRWIGDDPDREGLKDTPDRVIKSYKELFAGYKQIPTTQDTSR 70
           M+ KK  +E A+   +++    G+DPDR+GLK TP RV K+ + L  GY           
Sbjct: 69  MEEKKGAIESARR--KILKSLEGEDPDRDGLKKTPKRVAKALEFLTKGYHMSVEEVIKKA 126

Query: 71  FHFGEASKYQDMVLIKDISFFSYCEHHILPIWGKIHLAYIPKKHVIGLSKLVRILEVYSR 130
               E     +MV ++DI  FS CEHH+LP  G+  + YIP K V+GLSK  RI+E++SR
Sbjct: 127 LFKVEPKNNDEMVKVRDIDIFSLCEHHLLPFEGECTIGYIPNKKVLGLSKFARIIEIFSR 186

Query: 131 RLQIQERLTMQIAHAIESSTDSKGVAVLIEGQHMCMSMRGIKRDGLTTVTTAFTGEFSRD 190
           RLQ+QERLT QIA+A++      GVAV+I   HMCM+MRG+++   +T T+A+ G F  D
Sbjct: 187 RLQVQERLTQQIANALQKYLKPMGVAVVIVASHMCMNMRGVQKHDASTTTSAYLGVFRSD 246

Query: 191 K 191
            
Sbjct: 247 P 247


>gnl|CDD|178146 PLN02531, PLN02531, GTP cyclohydrolase I.
          Length = 469

 Score =  139 bits (351), Expect = 6e-34
 Identities = 62/206 (30%), Positives = 89/206 (43%), Gaps = 18/206 (8%)

Query: 13  LKKPTVEEAKEAIRVILRWIGDDPDREGLKDTPDRVIKSYKELFAGYK---------QIP 63
                      A+  ILR +G+DP R+ L  TP R ++       G +            
Sbjct: 261 ASPEPNPAMVSAVESILRSLGEDPLRKELVLTPSRFVRWLLNSTQGSRMGRNLEMKLNGF 320

Query: 64  TTQDTSRFHFGEASKYQDMVLIKDISFFSYCEHHILPIWGKIHLAYIPKKHV------IG 117
             +     H       + M    ++ F+S CEHH+LP +G +H+ Y   +        I 
Sbjct: 321 ACEKMDPLH--ANLNEKTMHTELNLPFWSQCEHHLLPFYGVVHVGYFCAEGGRGNRNPIS 378

Query: 118 LSKLVRILEVYSRRLQIQERLTMQIAHAIESSTDSKGVAVLIEGQHMCMSMRGIKRDGLT 177
            S L  I+  Y  RLQ+QERLT QIA  + SS     V V++E  H CM  RG+++ G +
Sbjct: 379 RSLLQSIVHFYGFRLQVQERLTRQIAETV-SSLLGGDVMVVVEASHTCMISRGVEKFGSS 437

Query: 178 TVTTAFTGEFSRDKGKTDFFLKMTHN 203
           T T A  G FS D      FL+    
Sbjct: 438 TATIAVLGRFSSDAKARAMFLQSIAT 463



 Score =  117 bits (295), Expect = 2e-27
 Identities = 57/155 (36%), Positives = 86/155 (55%), Gaps = 17/155 (10%)

Query: 23  EAIRVILRWIGDDPDREGLKDTPDRVIKSYKELFAGYKQI------------PTTQDTSR 70
            A++V+L+ +G+D +REGLK TP RV K+ +E   GYKQ                 D   
Sbjct: 37  SAVKVLLQGLGEDVNREGLKKTPLRVAKALREATRGYKQSAKDIVGGALFPEAGLDDGV- 95

Query: 71  FHFGEASKYQDMVLIKDISFFSYCEHHILPIWGKIHLAYIPK-KHVIGLSKLVRILEVYS 129
              G       +V+++D+  FSYCE  +LP   K H+ Y+P  + V+GLSKL R+ EV++
Sbjct: 96  ---GHGGGCGGLVVVRDLDLFSYCESCLLPFQVKCHIGYVPSGQRVVGLSKLSRVAEVFA 152

Query: 130 RRLQIQERLTMQIAHAIESSTDSKGVAVLIEGQHM 164
           +RLQ  +RL  +I  A+       GVAV++E  H+
Sbjct: 153 KRLQDPQRLADEICSALHHGIKPAGVAVVLECSHI 187


>gnl|CDD|181502 PRK08611, PRK08611, pyruvate oxidase; Provisional.
          Length = 576

 Score = 30.0 bits (68), Expect = 0.51
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 116 IGLSKLVRILEVYSRRLQIQERLTMQIAHAIESSTDSKGVAVLI 159
           + L K+   + VY+ ++   E L   +  AI ++ + KGVAVL 
Sbjct: 117 VNLEKMFEDVAVYNHQIMSAENLPEIVNQAIRTAYEKKGVAVLT 160


>gnl|CDD|183594 PRK12558, PRK12558, glutamyl-tRNA synthetase; Provisional.
          Length = 445

 Score = 29.1 bits (66), Expect = 0.91
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 19 EEAKEAIRVILRWIGDDPDRE 39
          +E  +AI   L+W+G + DR 
Sbjct: 51 QEYADAIAEDLKWLGINWDRT 71


>gnl|CDD|152687 pfam12252, SidE, Dot/Icm substrate protein.  This family of
           proteins is found in bacteria. Proteins in this family
           are typically between 397 and 1543 amino acids in
           length. This family is the SidE protein in the Dot/Icm
           pathway of Legionella pneumophila bacteria. There is
           little literature describing the family.
          Length = 1443

 Score = 28.3 bits (63), Expect = 1.4
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 11  MKLKKPTVEEAKEAIRVILRWIGDDPDREGLKDTPDRV-IKSYKELFAGYK 60
           ++++   + E K +I          PD EG+ +   RV +    +L   YK
Sbjct: 917 LRMQTAKLAEVKSSIEKDKGSYNKLPDLEGIFNLQSRVSLVQSNKLSPEYK 967


>gnl|CDD|184632 PRK14336, PRK14336, (dimethylallyl)adenosine tRNA
           methylthiotransferase; Provisional.
          Length = 418

 Score = 27.6 bits (61), Expect = 2.6
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 105 IHLA-YIPKKHVIGLSKLVRILEV--YSRRLQIQERLTMQIAHAIESSTDSKGVAVLIEG 161
           IH+A Y P+   +    +   + V    RRL++ E L  +      ++       VL+EG
Sbjct: 308 IHVAAYSPRPQTVAARDMADDVPVIEKKRRLKLIEDLQKETVGKANAALMDTFAEVLVEG 367

Query: 162 QH 163
             
Sbjct: 368 LQ 369


>gnl|CDD|170067 PRK09723, PRK09723, putative fimbrial-like adhesin protein;
           Provisional.
          Length = 421

 Score = 27.1 bits (60), Expect = 3.2
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 110 IPKKHVIGLSKLVRI--LEVYSRRLQIQERLTMQIAHAIESSTDSKGVAVLIEG 161
            P    I L   VR+  +E      ++       + + +  +  +KGV VLIEG
Sbjct: 291 TPVPFDISLQNCVRVRNIETKLVSTKVGTENKQLLGNTLTGNDAAKGVGVLIEG 344


>gnl|CDD|182830 PRK10909, rsmD, 16S rRNA m(2)G966-methyltransferase; Provisional.
          Length = 199

 Score = 27.0 bits (60), Expect = 3.3
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 14 KKPTVEEAKEAIRVIL-RWIGDD---PDREGLKDTPDRV 48
          KKP    + + IR+I  +W G     PD  GL+ T DRV
Sbjct: 3  KKPNHSGSGQ-IRIIGGQWRGRKLPVPDSPGLRPTTDRV 40


>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional.
          Length = 394

 Score = 27.0 bits (60), Expect = 3.5
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 41  LKDTPDRVIKSYKELFAGYKQIPTTQDTSRFHFGE----ASKYQDMVLIKDISF 90
           L   P+ V +  K L+  Y   PTT    R  F E    A KY+ M L+ D+ +
Sbjct: 160 LSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIM-LVHDLCY 212


>gnl|CDD|180146 PRK05582, PRK05582, DNA topoisomerase I; Validated.
          Length = 650

 Score = 27.1 bits (61), Expect = 3.7
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 7/31 (22%)

Query: 14 KKPTVEE----AKEAIRVILRWIGDDPDREG 40
          K P ++E    AK+A +V L     DPDREG
Sbjct: 60 KGPVIKELKKAAKKAKKVYL---ATDPDREG 87


>gnl|CDD|162429 TIGR01574, miaB-methiolase, tRNA-N(6)-(isopentenyl)adenosine-37
           thiotransferase enzyme MiaB.  Hits to this model span
           all major groups of bacteria and eukaryotes, but not
           archaea, which are known to lack this particular tRNA
           modification. The enzyme from Thermotoga maritima has
           been cloned, expressed, spectroscopically characterized
           and shown to complement the E. coli MiaB enzyme.
          Length = 438

 Score = 26.7 bits (59), Expect = 4.3
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 126 EVYSRRLQIQERLTMQIAHAIESSTDSKGVAVLIEG 161
           E+  RRLQ  +    +I        + K   VL+EG
Sbjct: 354 EIKKRRLQRLQARHNEILDKKMRKQEGKTFKVLVEG 389


>gnl|CDD|182548 PRK10559, PRK10559, p-hydroxybenzoic acid efflux subunit AaeA;
           Provisional.
          Length = 310

 Score = 26.6 bits (59), Expect = 4.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 177 TTVTTAFTGEFSRDKGKTDFFLKMTHNQR 205
           TT T   TG+  RD  +   F K+ H  R
Sbjct: 279 TTATVVITGKQDRDASQDSPFRKLAHRLR 307


>gnl|CDD|115716 pfam07080, DUF1348, Protein of unknown function (DUF1348).  This
          family consists of several highly conserved
          hypothetical proteins of around 150 residues in length.
          The function of this family is unknown.
          Length = 143

 Score = 26.7 bits (59), Expect = 4.6
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 17 TVEEAKEAIRVILR-WIGDDPDREGLKDTPDRVIKSYKELFAGYKQIPTTQDTSRFHFGE 75
          T E A + +R+    W   DP +  L  T D V ++  E F G + I        F   +
Sbjct: 8  TRETAIQKVRMAEDAWNSRDPAKVALAYTEDSVWRNRSEFFQGREAI------VAFLTRK 61

Query: 76 ASKYQDMVLIKDISFF 91
            +  D  LIK++  F
Sbjct: 62 WERELDYRLIKELWAF 77


>gnl|CDD|181823 PRK09401, PRK09401, reverse gyrase; Reviewed.
          Length = 1176

 Score = 26.4 bits (59), Expect = 4.6
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 7/45 (15%)

Query: 2   KCLRTGVFNMKLKKPTVEE----AKEAIRVILRWIGDDPDREGLK 42
           KC R G  N++ K+  +E     A E   V+   I  DPD EG K
Sbjct: 694 KCPRCGSTNIEDKEEIIEALRELALEVDEVL---IATDPDTEGEK 735


>gnl|CDD|128444 smart00139, MyTH4, Domain in Myosin and Kinesin Tails.  Domain
          present twice in myosin-VIIa, and also present in 3
          other myosins.
          Length = 144

 Score = 26.5 bits (59), Expect = 5.0
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 3/27 (11%)

Query: 13 LKKPTVEEAKEAIRV---ILRWIGDDP 36
          LK  + E  KEA+++   IL+++GD P
Sbjct: 11 LKLESDELQKEAVKIFKAILKFMGDLP 37


>gnl|CDD|129429 TIGR00329, gcp_kae1, metallohydrolase, glycoprotease/Kae1 family.
           This subfamily includes the well-studied secreted
           O-sialoglycoprotein endopeptidase (glycoprotease, EC
           3.4.24.57) of Pasteurella haemolytica, a pathogen. A
           member from Riemerella anatipestifer, associated with
           cohemolysin activity, likewise is exported without
           benefit of a classical signal peptide and shows
           glycoprotease activity on the test substrate
           glycophorin. However, archaeal members of this subfamily
           show unrelated activities as demonstrated in Pyrococcus
           abyssi: DNA binding, iron binding, apurinic endonuclease
           activity, genomic association with a kinase domain, and
           no glycoprotease activity. This family thus pulls
           together a set of proteins as a homology group that
           appears to be near-universal in life, yet heterogeneous
           in assayed function between bacteria and archaea.
          Length = 305

 Score = 26.2 bits (58), Expect = 6.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 145 AIESSTDSKGVAVLIEGQHMC 165
            IE+S D  GVA++ E  ++ 
Sbjct: 2   GIETSCDDTGVAIVDEEGNVL 22


>gnl|CDD|150775 pfam10139, Virul_Fac, Putative bacterial virulence factor.  Members
           of this family of prokaryotic proteins include various
           putative virulence factor effector proteins. Their exact
           function is, as yet, unknown.
          Length = 852

 Score = 26.2 bits (58), Expect = 6.5
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 6/40 (15%)

Query: 115 VIGLSK-----LVRILEVYSRRLQIQERLTMQIAHAIESS 149
           ++GL+K     LV  L   + RL ++E+L  +   A E S
Sbjct: 705 LLGLTKEAVELLVDELVTAAIRLDLEEQLA-KALAANEQS 743


>gnl|CDD|131767 TIGR02720, pyruv_oxi_spxB, pyruvate oxidase.  Members of this
           family are examples of pyruvate oxidase (EC 1.2.3.3), an
           enzyme with FAD and TPP as cofactors that catalyzes the
           reaction pyruvate + phosphate + O2 + H2O = acetyl
           phosphate + CO2 + H2O2. It should not be confused with
           pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in
           E. coli PoxB, although the E. coli enzyme is closely
           homologous and has pyruvate oxidase as an alternate
           name.
          Length = 575

 Score = 26.0 bits (57), Expect = 6.6
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 127 VYSRRLQIQERLTMQIAHAIESSTDSKGVAVL 158
           VY+R     E L   I  AI  +    GVAV+
Sbjct: 123 VYNRTAMTAESLPHVIDEAIRRAYAHNGVAVV 154


>gnl|CDD|180637 PRK06599, PRK06599, DNA topoisomerase I; Validated.
          Length = 675

 Score = 26.0 bits (58), Expect = 7.5
 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 7/29 (24%)

Query: 12 KLKKPTVEEAKEAIRVILRWIGDDPDREG 40
           LKK     AK+A  V L     DPDREG
Sbjct: 66 ALKK----AAKKADAVYL---ATDPDREG 87


>gnl|CDD|162577 TIGR01880, Ac-peptdase-euk, N-acyl-L-amino-acid amidohydrolase.
          This model represents a family of eukaryotic
          N-acyl-L-amino-acid amidohydrolases active on fatty
          acid and acetyl amides of L-amino acids.
          Length = 400

 Score = 25.9 bits (57), Expect = 7.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 11 MKLKKPTVEEAKEAIRVILRWIGDDP 36
          + L + T+E       V+L W G +P
Sbjct: 44 LGLARKTIEFVPGKPVVVLTWPGSNP 69


>gnl|CDD|178439 PLN02847, PLN02847, triacylglycerol lipase.
          Length = 633

 Score = 26.0 bits (57), Expect = 8.0
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 140 MQIAHAIESSTDSKGVAVLIEGQHMCMSMRGIKRDGLTTVTTA 182
           ++ A  I    +SK   +LI G H       IK D LT  T A
Sbjct: 165 LKPAFTIIRDENSKCFLLLIRGTH------SIK-DTLTAATGA 200


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.323    0.138    0.407 

Gapped
Lambda     K      H
   0.267   0.0627    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 3,332,078
Number of extensions: 206737
Number of successful extensions: 474
Number of sequences better than 10.0: 1
Number of HSP's gapped: 464
Number of HSP's successfully gapped: 32
Length of query: 205
Length of database: 5,994,473
Length adjustment: 89
Effective length of query: 116
Effective length of database: 4,071,361
Effective search space: 472277876
Effective search space used: 472277876
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.2 bits)