HHsearch alignment for GI: 255764507 and conserved domain: COG0466

>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=96.74  E-value=0.0017  Score=42.81  Aligned_cols=93  Identities=25%  Similarity=0.414  Sum_probs=48.3

Q ss_pred             CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCC-C-EEEEEEEEECCCCCCCCCCC--CCCCC-CHHHHHHHHHCCE---
Q ss_conf             048347972999988899998999999997489-8-05998211079899854687--52223-7999866530552---
Q gi|255764507|r    8 PLTVNHRGMMLIISSPSGVGKSTIARHLLKCDQ-N-FEMSISVTTRVRRPNEVDGK--DYYFL-SLSRFNELKKANA---   79 (222)
Q Consensus         8 ~~~~~~r~~iivl~GpsG~GK~tl~~~L~~~~~-~-~~~~v~~TTR~~R~gE~~G~--dY~Fv-s~~~F~~~i~~~~---   79 (222)
T Consensus       343 ~l~~~~kGpILcLVGPPGVGKTSLgkSIA~al~RkfvR~sLGGv---rDEAEIRGHRRTYIGaMPGrIiQ~mkka~~~NP  419 (782)
T COG0466         343 KLTKKLKGPILCLVGPPGVGKTSLGKSIAKALGRKFVRISLGGV---RDEAEIRGHRRTYIGAMPGKIIQGMKKAGVKNP  419 (782)
T ss_pred             HHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCC---CCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf             86146788579997899887011899999995897799954765---427775355312335687289999998677687


Q ss_pred             -EE--EEEECCCCCEEEECCHHHHHHH
Q ss_conf             -44--5456045733413211223221
Q gi|255764507|r   80 -FI--EKAEVHGNFYGTLRDPIEETIS  103 (222)
Q Consensus        80 -Fl--E~~~~~g~~YGt~~~~i~~~l~  103 (222)
T Consensus       420 v~LLDEIDKm~ss~rGDPaSALLEVLD  446 (782)
T COG0466         420 VFLLDEIDKMGSSFRGDPASALLEVLD  446 (782)
T ss_pred             EEEEECHHHCCCCCCCCHHHHHHHHCC
T ss_conf             478640333167777886888886269