HHsearch alignment for GI: 255764507 and conserved domain: COG0466
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=96.74 E-value=0.0017 Score=42.81 Aligned_cols=93 Identities=25% Similarity=0.414 Sum_probs=48.3
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCC-C-EEEEEEEEECCCCCCCCCCC--CCCCC-CHHHHHHHHHCCE---
Q ss_conf 048347972999988899998999999997489-8-05998211079899854687--52223-7999866530552---
Q gi|255764507|r 8 PLTVNHRGMMLIISSPSGVGKSTIARHLLKCDQ-N-FEMSISVTTRVRRPNEVDGK--DYYFL-SLSRFNELKKANA--- 79 (222)
Q Consensus 8 ~~~~~~r~~iivl~GpsG~GK~tl~~~L~~~~~-~-~~~~v~~TTR~~R~gE~~G~--dY~Fv-s~~~F~~~i~~~~--- 79 (222)
T Consensus 343 ~l~~~~kGpILcLVGPPGVGKTSLgkSIA~al~RkfvR~sLGGv---rDEAEIRGHRRTYIGaMPGrIiQ~mkka~~~NP 419 (782)
T COG0466 343 KLTKKLKGPILCLVGPPGVGKTSLGKSIAKALGRKFVRISLGGV---RDEAEIRGHRRTYIGAMPGKIIQGMKKAGVKNP 419 (782)
T ss_pred HHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCC---CCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 86146788579997899887011899999995897799954765---427775355312335687289999998677687
Q ss_pred -EE--EEEECCCCCEEEECCHHHHHHH
Q ss_conf -44--5456045733413211223221
Q gi|255764507|r 80 -FI--EKAEVHGNFYGTLRDPIEETIS 103 (222)
Q Consensus 80 -Fl--E~~~~~g~~YGt~~~~i~~~l~ 103 (222)
T Consensus 420 v~LLDEIDKm~ss~rGDPaSALLEVLD 446 (782)
T COG0466 420 VFLLDEIDKMGSSFRGDPASALLEVLD 446 (782)
T ss_pred EEEEECHHHCCCCCCCCHHHHHHHHCC
T ss_conf 478640333167777886888886269