HHsearch alignment for GI: 255764507 and conserved domain: PRK00625
>PRK00625 shikimate kinase; Provisional.
Probab=97.81 E-value=0.00011 Score=50.49 Aligned_cols=147 Identities=14% Similarity=0.156 Sum_probs=74.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCC--CCCCCCC--CCCCC--CCHHHHHHHHHCCEEEEEEECCCCCE
Q ss_conf 999888999989999999974898059982110798--9985468--75222--37999866530552445456045733
Q gi|255764507|r 18 LIISSPSGVGKSTIARHLLKCDQNFEMSISVTTRVR--RPNEVDG--KDYYF--LSLSRFNELKKANAFIEKAEVHGNFY 91 (222)
Q Consensus 18 ivl~GpsG~GK~tl~~~L~~~~~~~~~~v~~TTR~~--R~gE~~G--~dY~F--vs~~~F~~~i~~~~FlE~~~~~g~~Y 91 (222)
T Consensus 3 I~LIG~mGsGKStiGk~LA~~l-~~~FvD~--D~~Ie~~~~~~i~~Si~eIf~~~GE~~FR~~E~--~~l~-----~-l- 70 (173)
T PRK00625 3 IFLCGLPTVGKTSFGKALAKFL-SLPFFDT--DDLIVSNYHGALYSSPKEIYQAYGEEGFCEEEA--LALE-----S-L- 70 (173)
T ss_pred EEEECCCCCCHHHHHHHHHHHH-CCCEEEC--HHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHH--HHHH-----H-H-
T ss_conf 9998999998899999999993-9995774--999999868652356999999718999999999--9999-----7-3-
Q ss_pred EEECCHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHH
Q ss_conf 41321122322101220301452344555312674157898621327999999985201121-12899999999999999
Q gi|255764507|r 92 GTLRDPIEETISKGKDMLFDIDWQGAQNLHKQMGSNVLSFFILPPTMQELCSRLSLRAKKNQ-EDKEKVQLRLQNAYSEI 170 (222)
Q Consensus 92 Gt~~~~i~~~l~~g~~~ildid~qG~~~l~~~~~~~~~~IFI~pps~e~L~~RL~~R~~~~~-d~~e~i~~Rl~~a~~E~ 170 (222)
T Consensus 71 --~~~--~~VIstGGG~v~~--~~n~~~Lk~~----g~vV~L~~~-~e~i~~Rl~~rpl~~~~~~~~~l~~l~--~eR~~ 137 (173)
T PRK00625 71 --PVI--PSIVALGGGTLMH--EESYDHIRNR----GLLVLLSLP-IATIYQRLQKRGLPERLKKTPSLEEIL--TQRID 137 (173)
T ss_pred --CCC--CCEEECCCCCCCC--HHHHHHHHHC----CEEEEEECC-HHHHHHHHHCCCCCCCCCCHHHHHHHH--HHHHH
T ss_conf --248--9689748850178--9999999968----999998399-999999982699877788357999999--99999
Q ss_pred HHHHHCCEEEECCCHHHHH
Q ss_conf 8764189799949889999
Q gi|255764507|r 171 KKWEFYDYVLINDDLENSL 189 (222)
Q Consensus 171 ~~~~~fD~vIvNddle~a~ 189 (222)
T Consensus 138 lY~~~AD~iI~~d~~sit~ 156 (173)
T PRK00625 138 RMREIADYIFSLDHVALTS 156 (173)
T ss_pred HHHHHCCEEEECCCCCCCC
T ss_conf 9999799999689976132