HHsearch alignment for GI: 255764507 and conserved domain: PRK09183
>PRK09183 transposase/IS protein; Provisional.
Probab=96.04 E-value=0.0047 Score=39.93 Aligned_cols=40 Identities=28% Similarity=0.326 Sum_probs=26.0
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEE
Q ss_conf 3479729999888999989999999974898059982110
Q gi|255764507|r 11 VNHRGMMLIISSPSGVGKSTIARHLLKCDQNFEMSISVTT 50 (222)
Q Consensus 11 ~~~r~~iivl~GpsG~GK~tl~~~L~~~~~~~~~~v~~TT 50 (222)
T Consensus 97 fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~ 136 (258)
T PRK09183 97 FIERNENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTT 136 (258)
T ss_pred HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 6655886799899998689999999999998799399978