HHsearch alignment for GI: 255764507 and conserved domain: PRK13948
>PRK13948 shikimate kinase; Provisional.
Probab=97.53 E-value=0.00027 Score=47.92 Aligned_cols=156 Identities=15% Similarity=0.134 Sum_probs=69.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCC--CCC--CCHHHHHHHHHCCEEEEEEECCCCC
Q ss_conf 729999888999989999999974898059982110798998546875--222--3799986653055244545604573
Q gi|255764507|r 15 GMMLIISSPSGVGKSTIARHLLKCDQNFEMSISVTTRVRRPNEVDGKD--YYF--LSLSRFNELKKANAFIEKAEVHGNF 90 (222)
Q Consensus 15 ~~iivl~GpsG~GK~tl~~~L~~~~~~~~~~v~~TTR~~R~gE~~G~d--Y~F--vs~~~F~~~i~~~~FlE~~~~~g~~ 90 (222)
T Consensus 10 ~~~IvLIG~mGsGKStiGk~LA~~l-~~~fiD~D~~Ie~~~----g~sI~eIF~~~GE~~FR~~E~--~~l~~--l~--- 77 (182)
T PRK13948 10 ATFVALAGFMGTGKSRIGWELSRAL-ALHFVDTDKLITRVV----GKSIPEVFAQEGEEYFRACEK--EVVRR--VT--- 77 (182)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHH-CCCEEECHHHHHHHH----CCCHHHHHHHHCHHHHHHHHH--HHHHH--HH---
T ss_conf 9818988999998899999999996-959888849999988----939999999848999999999--99999--97---
Q ss_pred EEEECCHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCC---CCHHHHHHHHHHHHHH
Q ss_conf 3413211223221012203014523445553126741578986213279999999852011---2112899999999999
Q gi|255764507|r 91 YGTLRDPIEETISKGKDMLFDIDWQGAQNLHKQMGSNVLSFFILPPTMQELCSRLSLRAKK---NQEDKEKVQLRLQNAY 167 (222)
Q Consensus 91 YGt~~~~i~~~l~~g~~~ildid~qG~~~l~~~~~~~~~~IFI~pps~e~L~~RL~~R~~~---~~d~~e~i~~Rl~~a~ 167 (222)
T Consensus 78 ---~~~--~~VIStGGG~v~~--~~n~~~l~~~----g~vv~L~~~-~~~i~~R~~~~~RPll~~~~~~~~l~~l~~--e 143 (182)
T PRK13948 78 ---RLD--YAVISLGGGTFIH--EENRRALLGR----GPVVVLWAS-PETVYQRTKHSDRPLLQVEDPLERIRTLME--E 143 (182)
T ss_pred ---CCC--CEEEECCCCEECC--HHHHHHHHHC----CEEEEEECC-HHHHHHHCCCCCCCCCCCCCHHHHHHHHHH--H
T ss_conf ---479--9699758850058--9999999968----989999699-999998817899998889987999999999--9
Q ss_pred HHHHHHHHCCEEEECCC--HHHHHHHHHHHHH
Q ss_conf 99987641897999498--8999999999999
Q gi|255764507|r 168 SEIKKWEFYDYVLINDD--LENSLSILKSVIE 197 (222)
Q Consensus 168 ~E~~~~~~fD~vIvNdd--le~a~~~L~~iI~ 197 (222)
T Consensus 144 R~~~Y~~-A~~~I~td~~~~~eiv~~Ii~~L~ 174 (182)
T PRK13948 144 REPVYRQ-GTIHVHSDGRPVEEIVEEVVERLW 174 (182)
T ss_pred HHHHHHH-CCEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9999996-788988998999999999999999