HHsearch alignment for GI: 255764507 and conserved domain: PRK13974
>PRK13974 thymidylate kinase; Provisional.
Probab=98.00 E-value=9.2e-06 Score=57.28 Aligned_cols=175 Identities=19% Similarity=0.245 Sum_probs=86.8
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHCC--CE--EEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCC----EE---EE
Q ss_conf 972999988899998999999997489--80--599821107989985468752223799986653055----24---45
Q gi|255764507|r 14 RGMMLIISSPSGVGKSTIARHLLKCDQ--NF--EMSISVTTRVRRPNEVDGKDYYFLSLSRFNELKKAN----AF---IE 82 (222)
Q Consensus 14 r~~iivl~GpsG~GK~tl~~~L~~~~~--~~--~~~v~~TTR~~R~gE~~G~dY~Fvs~~~F~~~i~~~----~F---lE 82 (222)
T Consensus 2 ~G~fIv~EGiDGsGKsTq~~~L~~~L~~~g~~~~~~~~~~~rePg~t~-~g--------~~ir~~l~~~~~~~~~~~~~e 72 (212)
T PRK13974 2 KGKFIVLEGIDGCGKTTQIDHLSKWLPSSGLMPKGAKLIITREPGGTL-LG--------KSLRELLLDTSKDNSPSPLAE 72 (212)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC-HH--------HHHHHHHHCCCCCCCCCHHHH
T ss_conf 941999889999989999999999998658753586157714999980-69--------999999806654568887999
Q ss_pred EEECCCCCEEEECCHHHHHHHCCCCEEECC------CHHHH---------HHHHHC----CCCCHHHHHHHCCCHHHHHH
Q ss_conf 456045733413211223221012203014------52344---------555312----67415789862132799999
Q gi|255764507|r 83 KAEVHGNFYGTLRDPIEETISKGKDMLFDI------DWQGA---------QNLHKQ----MGSNVLSFFILPPTMQELCS 143 (222)
Q Consensus 83 ~~~~~g~~YGt~~~~i~~~l~~g~~~ildi------d~qG~---------~~l~~~----~~~~~~~IFI~pps~e~L~~ 143 (222)
T Consensus 73 ~lLf~AdR~e~~~~~I~paL~~G~iVI~DRY~~St~AYQg~~~g~~~~~i~~l~~~~~~~~~PD-lt~~LDv~-~e~a~~ 150 (212)
T PRK13974 73 LLLYAADRAQHVSKIIRPALENGDWVISDRFSGSTLAYQGYGRGLDLELIKNLESIATQGLSPD-LTFFLEIS-VEESIR 150 (212)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC-EEEEECCC-HHHHHH
T ss_conf 9999999999999999999837999997883235999988626999999999999874799999-89997697-588999
Q ss_pred HHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHHHCCEEEEC--CCHHHHHHHHHHHHHHHHHH
Q ss_conf 9985201121128-99999999999999876418979994--98899999999999998874
Q gi|255764507|r 144 RLSLRAKKNQEDK-EKVQLRLQNAYSEIKKWEFYDYVLIN--DDLENSLSILKSVIEVERIR 202 (222)
Q Consensus 144 RL~~R~~~~~d~~-e~i~~Rl~~a~~E~~~~~~fD~vIvN--ddle~a~~~L~~iI~~er~~ 202 (222)
T Consensus 151 R~~~~~~dr~e~e~~~f~~kVr~~y~~la~--~~~~~~IDa~~~ieeV~~~I~~~i~-~~~~ 209 (212)
T PRK13974 151 RRKNRKPDRIEAEGIEFLERVAEGFALIAE--ERNWKVISADQSIETISNEIKETLL-NNFS 209 (212)
T ss_pred HHHCCCCCCHHCCCHHHHHHHHHHHHHHHC--CCCEEEEECCCCHHHHHHHHHHHHH-HHHH
T ss_conf 884776343101619999999999999847--3987999899999999999999999-9973