HHsearch alignment for GI: 255764507 and conserved domain: TIGR01420
>TIGR01420 pilT_fam twitching motility protein; InterPro: IPR006321 These represent the PilT subfamily of proteins related to GspE, a protein involved in type II secretion (also called the General Secretion Pathway). PilT is an apparent cytosolic ATPase associated with type IV pilus systems. It is not required for pilin biogenesis, but is required for twitching motility and social gliding behaviors, shown in some species, powered by pilus retraction . Members of this family may be found in some species that do not have type IV pili but have related structures for DNA uptake and natural transformation. ; GO: 0005524 ATP binding, 0006810 transport.
Probab=95.73 E-value=0.01 Score=37.83 Aligned_cols=50 Identities=26% Similarity=0.424 Sum_probs=28.7
Q ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHC-CCEEEEEEEEECCCCCCCCCCCCCCCCCH
Q ss_conf 834797299998889999899999999748-98059982110798998546875222379
Q gi|255764507|r 10 TVNHRGMMLIISSPSGVGKSTIARHLLKCD-QNFEMSISVTTRVRRPNEVDGKDYYFLSL 68 (222)
Q Consensus 10 ~~~~r~~iivl~GpsG~GK~tl~~~L~~~~-~~~~~~v~~TTR~~R~gE~~G~dY~Fvs~ 68 (222)
T Consensus 123 a~~~~G-LiLVTGPTGSGKSTTlAsmIDyIN~~~~~HI-iTI-------EDPIEyvh~~~ 173 (350)
T TIGR01420 123 AERPRG-LILVTGPTGSGKSTTLASMIDYINKNKAGHI-ITI-------EDPIEYVHKNK 173 (350)
T ss_pred HHCCCC-CEEEECCCCCCHHHHHHHHHHHHHCCCCCCC-EEE-------ECCEEEEECCC
T ss_conf 836699-3898768898678999999978740388882-563-------17731410477