HHsearch alignment for GI: 255764507 and conserved domain: TIGR01846
>TIGR01846 type_I_sec_HlyB type I secretion system ATPase; InterPro: IPR010132 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This entry contains one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane.
Probab=97.62 E-value=8.7e-05 Score=51.05 Aligned_cols=51 Identities=27% Similarity=0.375 Sum_probs=39.0
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHC-CCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 797299998889999899999999748-98059982110798998546875222379998665
Q gi|255764507|r 13 HRGMMLIISSPSGVGKSTIARHLLKCD-QNFEMSISVTTRVRRPNEVDGKDYYFLSLSRFNEL 74 (222)
Q Consensus 13 ~r~~iivl~GpsG~GK~tl~~~L~~~~-~~~~~~v~~TTR~~R~gE~~G~dY~Fvs~~~F~~~ 74 (222)
T Consensus 489 ~~Ge~IGIvGpSGSGKSTLTKL~QRLYtP~~GqVL-----------VDG~DLA~~DP~wLRRQ 540 (703)
T TIGR01846 489 KPGEVIGIVGPSGSGKSTLTKLLQRLYTPEHGQVL-----------VDGVDLAIADPAWLRRQ 540 (703)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEE-----------ECCCCCCCCCCCHHHHC
T ss_conf 78657998727898678999998861488887477-----------70300010185201022