HHsearch alignment for GI: 255764507 and conserved domain: TIGR02639
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit ClpA; InterPro: IPR013461 Proteins in this entry are related to ClpA () from Escherichia coli. ClpA is an ATP-dependent chaperone and part of the ClpAP protease that participates in regulatory protein degradation and the dissolution and degradation of protein aggregates . ClpA recognises sequences in specific proteins, which it then unfolds in an ATP-dependent manner and transports into the degradation chamber of the associated ClpP protein , . A small adaptor-like protein, ClpS, modulates the activity of ClpA and is an important regulatory factor for this protein . It protects ClpA from autodegradation and appears to redirect its activity away from soluble proteins and toward aggregated proteins..
Probab=97.08 E-value=0.00062 Score=45.58 Aligned_cols=31 Identities=23% Similarity=0.515 Sum_probs=24.2
Q ss_pred CCCE-EEEEECCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 7972-9999888999989999999974898059
Q gi|255764507|r 13 HRGM-MLIISSPSGVGKSTIARHLLKCDQNFEM 44 (222)
Q Consensus 13 ~r~~-iivl~GpsG~GK~tl~~~L~~~~~~~~~ 44 (222)
T Consensus 524 nkP~GSFLF~GPTGVGKTElak~LA~~L-Gv~l 555 (774)
T TIGR02639 524 NKPVGSFLFVGPTGVGKTELAKQLAEEL-GVHL 555 (774)
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHH-CCHH
T ss_conf 8816888864798962578899999970-8200