HHsearch alignment for GI: 255764507 and conserved domain: TIGR03269

>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.

Probab=97.25  E-value=0.0011  Score=44.04  Aligned_cols=66  Identities=24%  Similarity=0.263  Sum_probs=39.1

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHH---CCCEEEEE---------EEEECCCCCCC--------C--CCCCCCCCCHH
Q ss_conf             479729999888999989999999974---89805998---------21107989985--------4--68752223799
Q gi|255764507|r   12 NHRGMMLIISSPSGVGKSTIARHLLKC---DQNFEMSI---------SVTTRVRRPNE--------V--DGKDYYFLSLS   69 (222)
Q Consensus        12 ~~r~~iivl~GpsG~GK~tl~~~L~~~---~~~~~~~v---------~~TTR~~R~gE--------~--~G~dY~Fvs~~   69 (222)
T Consensus        23 i~~Gei~~LvG~sGsGKSTL~~~l~Gl~~~~p~~G~I~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~  102 (520)
T TIGR03269        23 IEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDK  102 (520)
T ss_pred             ECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             99998999999999699999999965144799865999603544333323442114654434566224444335686889


Q ss_pred             HHHHHHHC
Q ss_conf             98665305
Q gi|255764507|r   70 RFNELKKA   77 (222)
Q Consensus        70 ~F~~~i~~   77 (222)
T Consensus       103 ~~~~~~~~  110 (520)
T TIGR03269       103 LRRRIRKR  110 (520)
T ss_pred             HHHHHHCC
T ss_conf             99986616