>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=97.05  E-value=0.00053  Score=46.01  Aligned_cols=27  Identities=26%  Similarity=0.412  Sum_probs=23.0

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             479729999888999989999999974
Q gi|255764507|r   12 NHRGMMLIISSPSGVGKSTIARHLLKC   38 (222)
Q Consensus        12 ~~r~~iivl~GpsG~GK~tl~~~L~~~   38 (222)
T Consensus        22 i~~GEiv~liGpNGaGKSTLlk~l~Gl   48 (246)
T cd03237          22 ISESEVIGILGPNGIGKTTFIKMLAGV   48 (246)
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf             657989999979997699999999778