HHsearch alignment for GI: 255764507 and conserved domain: pfam02223
>pfam02223 Thymidylate_kin Thymidylate kinase.
Probab=97.76 E-value=1.9e-05 Score=55.26 Aligned_cols=157 Identities=20% Similarity=0.298 Sum_probs=76.0
Q ss_pred ECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCEEEE-----C
Q ss_conf 88899998999999997489805998211079899854687522237999866530552445456045733413-----2
Q gi|255764507|r 21 SSPSGVGKSTIARHLLKCDQNFEMSISVTTRVRRPNEVDGKDYYFLSLSRFNELKKANAFIEKAEVHGNFYGTL-----R 95 (222)
Q Consensus 21 ~GpsG~GK~tl~~~L~~~~~~~~~~v~~TTR~~R~gE~~G~dY~Fvs~~~F~~~i~~~~FlE~~~~~g~~YGt~-----~ 95 (222)
T Consensus 2 EGiDGsGKsTq~~~L~~~L~~~g~~v-~~~~ep~~~~~-g~--------~ir~~l~~~~~~~-~~~~~llf~adR~~~~~ 70 (186)
T pfam02223 2 EGLDGAGKTTQAELLKERLKEQGIKV-VLTREPGGTPI-GE--------KIRELLLRNEELS-PLTEALLFAADRIEHLE 70 (186)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCEE-EEEECCCCCHH-HH--------HHHHHHHCCCCCC-HHHHHHHHHHHHHHHHH
T ss_conf 79999899999999999999879908-99749999837-99--------9999985012589-99999999999999999
Q ss_pred CHHHHHHHCCCCEEECCC------HHHHH---------HHHHCC---CCCHHHHHHHCCCHHHHHHHHHHHCCCCCHH--
Q ss_conf 112232210122030145------23445---------553126---7415789862132799999998520112112--
Q gi|255764507|r 96 DPIEETISKGKDMLFDID------WQGAQ---------NLHKQM---GSNVLSFFILPPTMQELCSRLSLRAKKNQED-- 155 (222)
Q Consensus 96 ~~i~~~l~~g~~~ildid------~qG~~---------~l~~~~---~~~~~~IFI~pps~e~L~~RL~~R~~~~~d~-- 155 (222)
T Consensus 71 ~~i~~~l~~g~~VI~DRy~~S~~ayq~~~~~~~~~~i~~l~~~~~~~~PD-lti~Ldv~-pe~~~~Ri~~R~~~~~~e~e 148 (186)
T pfam02223 71 EKIKPALKQGKTVICDRYLFSSIAYQGAAGGLGLDLVLSLNPDVPGPKPD-LTFLLDVD-PEVALKRLRRRGELDEFEFE 148 (186)
T ss_pred HHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCC-EEEEEECC-HHHHHHHHHHCCCCCHHHHC
T ss_conf 99999997699899607313489987620477899999998720678999-89998389-99999999866875627651
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCEEEEC--CCHHHHHHH
Q ss_conf 899999999999999876418979994--988999999
Q gi|255764507|r 156 KEKVQLRLQNAYSEIKKWEFYDYVLIN--DDLENSLSI 191 (222)
Q Consensus 156 ~e~i~~Rl~~a~~E~~~~~~fD~vIvN--ddle~a~~~ 191 (222)
T Consensus 149 ~~~~~~kv~~~Y~~l~~-~~~~~~~IDa~~~i~ev~~~ 185 (186)
T pfam02223 149 QLDFLRKVRERYLELAK-DDERILIIDASNSIEEVHEE 185 (186)
T ss_pred CHHHHHHHHHHHHHHHC-CCCCEEEEECCCCHHHHHHH
T ss_conf 79999999999999976-99978998799999999704