HHsearch alignment of GI: 255764508 and MMDB domain: 3ca8_A_32-182
>3ca8_A (A:32-182) Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genomics, structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli K12}
Probab=99.95 E-value=6.6e-28 Score=200.88 Aligned_cols=124 Identities=17% Similarity=0.213 Sum_probs=107.5
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCC------------------C
Q ss_conf 5456875899962521377776555434682058999999999982520057533897068------------------8
Q gi|255764508|r 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG------------------D 122 (242)
Q Consensus 61 ~~~~~~d~IVVLGgG~~~~~~~~~~~~~~~~~~~~Rl~~a~~L~~~~~~~~~~~~ii~SGg------------------~ 122 (242)
++++++|+|||||||.. .|...|+++|+++.++. ++++|+ .
T Consensus 1 d~~~~~d~ivVLG~~~~-----------------~r~~~a~~l~~~~~a~~----i~~~g~~~~~~~~~~~~~~~~~~~~ 59 (151)
T 3ca8_A 1 EVPYQADCVILAGNAVM-----------------PTIDAACKIARDQQIPL----LISGGIGHSTTFLYSAIAQHPHYNT 59 (151)
T ss_dssp TCCCCCSEEEEESCCCH-----------------HHHHHHHHHHHHHTCCE----EEECCSSTTHHHHHHHHHTCTTGGG
T ss_pred CCCCCCCEEEEECCCCH-----------------HHHHHHHHHHHHCCCCE----EEECCCCCCCCHHHHHHHCCCCCCC
T ss_conf 77889898998189841-----------------88999999998359888----9617987454104444312666666
Q ss_pred CCCCCCCHHHHHHHHHHHC-CCCHHHHHCCHHHHHHHHHHHHHHHHHHHC--CCCCEEEECCHHHHHHHHHHHHHCCCEE
Q ss_conf 8877888279999999974-999878111101466577799999997623--6864088534588999999999769818
Q gi|255764508|r 123 PQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINT 199 (242)
Q Consensus 123 ~~~~~~~Ea~~m~~~l~~~-Gv~~~~I~~e~~s~nT~ena~~~~~il~~~--~~~~vilVTsa~Hm~RA~~~f~~~gi~~ 199 (242)
..+++.+||+.|+++|+++ |||+++|++|++|+||+||+.+++++++++ ++++++||||+|||+||+++|+++|+++
T Consensus 60 ~~~~~~sEA~~m~~~l~~~~Gvp~~~I~~e~~s~~T~eNa~~~~~~l~~~~~~~~~iilVTs~~H~~Ra~~~~~~~~~~~ 139 (151)
T 3ca8_A 60 IRTTGRAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRMTGDN 139 (151)
T ss_dssp SCCTTSCHHHHHHHHHHHTTCCCGGGEEEECCCCSHHHHHHHHHHHHHTCSSCCSCEEEECCTTTHHHHHHHHHHHHCCC
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf 78899889999999999964998999552788778899999999999963999887999898888999999999975767
Q ss_pred EEEECC
Q ss_conf 998426
Q gi|255764508|r 200 KASCSD 205 (242)
Q Consensus 200 ~p~~~d 205 (242)
.|+|++
T Consensus 140 ~~~~~~ 145 (151)
T 3ca8_A 140 PDAPRW 145 (151)
T ss_dssp TTSCSE
T ss_pred CCCCCE
T ss_conf 777402