BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|255764508|ref|YP_003065363.2| hypothetical protein
CLIBASIA_04245 [Candidatus Liberibacter asiaticus str. psy62]
(242 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|255764508|ref|YP_003065363.2| hypothetical protein CLIBASIA_04245 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254547859|gb|ACT57423.2| hypothetical protein CLIBASIA_04245 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 242
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP
Sbjct: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG
Sbjct: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS
Sbjct: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG
Sbjct: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Query: 241 NR 242
NR
Sbjct: 241 NR 242
>gi|84387309|ref|ZP_00990329.1| hypothetical protein V12B01_04678 [Vibrio splendidus 12B01]
gi|84377758|gb|EAP94621.1| hypothetical protein V12B01_04678 [Vibrio splendidus 12B01]
Length = 253
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 91/228 (39%), Positives = 126/228 (55%), Gaps = 4/228 (1%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
V + LL +F + F IG G+IP LL LQ Y+ D N
Sbjct: 12 FVGFTRLLQWRKTSLFLSLVLISSFVLIGSGLIPRYLLNDLQADYESKPDI--QWSDNNA 69
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IVLLG GT +I + EP+F S+ RI ET YK C + C +IISGGD Q +G+
Sbjct: 70 IVLLGAGTQLIKSTQ--EFEPAFFSFGRISETASQYKDCAKAQTTCKVIISGGDAQNNGV 127
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ +Y +LL V DDI E S++T++NAQ +S ++K+ + NI+LVSS H++RS
Sbjct: 128 TEAEIYQQQLLRLDVPMDDIIQEPNSVNTWKNAQLTSDLMKHHKFDNIVLVSSGLHIRRS 187
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LYF HFG+N +DY+ A S +PL NF +T+ AL E IG
Sbjct: 188 ELYFNHFGLNVIPVRADYMAAQISWLPLWYNFAVTDFALHEQIGFARY 235
>gi|83745961|ref|ZP_00943017.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|83727355|gb|EAP74477.1| Integral membrane protein [Ralstonia solanacearum UW551]
Length = 265
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ + ++ +IV+ L + R ++ L LF IG G +P LL L+ ++
Sbjct: 17 LPVLFLLVIVTAICALRRQRRTARGLAVVSLALFVAIGCGPVPAWLLDSLEGPFEARPAV 76
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
N IVLLG GT + +EP SY R+ E + Y++C++ C I++S
Sbjct: 77 A--WGKRNAIVLLGAGTRRVD----GGVEPGVFSYPRLMEAAQQYQACRKTDADCKILVS 130
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD + HG E+ VY L G++ D+ LE S++T+QNAQFS + + + +LV
Sbjct: 131 GGDARHHGDPEAAVYRRALQAIGIDAGDVLLEPNSMNTWQNAQFSRAALAAYAPERTVLV 190
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SSA HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 191 SSAIHLRRSLLYFTHFGMTPTPVRADDLQATPSPLPLAINFAMTDYALHEWIGIARYHV 249
>gi|281418736|ref|ZP_06249755.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|281407820|gb|EFB38079.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 251
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 16/242 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + S+W + + + I ++ L+ L+ YQ P
Sbjct: 19 IILLLAAASFWQYKKKDPKCTKLFVIITAILYLISTPMVCDSLIWSLEKKYQPPSEL--- 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+G++I++LG G + S + +R+ ++LY + IIISGG
Sbjct: 76 --NGDVIIMLGGGAFADTPNVNGKGHLSSIAANRLLTCVQLYYK-----LDVPIIISGGQ 128
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
H +E + N LL GV + I +E +SL+T QNA ++ ++ ILV+SA
Sbjct: 129 IPGHTTSEGEIARNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNKPILVTSA 188
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIA 236
+H+KR+ F+ +N +DY + +P + ++KEY+GI+ +
Sbjct: 189 FHMKRAVKQFEKNEVNVIPYPTDYQTNSIRKITFMDFVPSAEALQKFYFSVKEYVGIVAS 248
Query: 237 YY 238
+
Sbjct: 249 RW 250
>gi|84624480|ref|YP_451852.1| hypothetical protein XOO_2823 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368420|dbj|BAE69578.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 253
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 134/241 (55%), Gaps = 7/241 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQ---SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ + ++ + L+ + +LL +G G +P+ +L HLQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRLGLRRFSRVLGLTSVLLVFAVGCGPLPSWMLHHLQHTGVNDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N+IVLLG GT A+ E + +Y RI E+ RLY+ C+ C I
Sbjct: 61 ---NAWGARNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESARLYQQCRHSGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGDP+ GL+E++VY L++ + + D+ +E S++T QNAQFS +++ I+
Sbjct: 117 ISGGDPRGLGLSEAVVYRRVLVDLAIPQADVIMEPSSMNTLQNAQFSQPLLRAYGPDRIV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
LVSSA HL R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+G+
Sbjct: 177 LVSSATHLCRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGMARYR 236
Query: 238 Y 238
Sbjct: 237 L 237
>gi|149909508|ref|ZP_01898162.1| hypothetical protein PE36_16920 [Moritella sp. PE36]
gi|149807413|gb|EDM67364.1| hypothetical protein PE36_16920 [Moritella sp. PE36]
Length = 257
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 119/229 (51%), Gaps = 4/229 (1%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
K + +LL I G+IP LL LQ Y +P +D N I
Sbjct: 13 FLVLRFFNFHRAKSVLLCSTILLTVLISIGVIPKYLLDKLQQDYV--AQAPIHWQDNNAI 70
Query: 70 VLLGNGTT--IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+LLG G IEP F ++SRI+ RLY C C II+SGGD QK G
Sbjct: 71 ILLGAGLEKVGDTINNVDSIEPPFHAFSRIYAAARLYNECIGTEQQCKIIVSGGDTQKLG 130
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ VY N+L+ G+ DI E SL+T+QNAQF+S ++ N +L+SS H+KR
Sbjct: 131 DTEAAVYKNRLVSIGINAADIITEPNSLNTWQNAQFTSDILSKGDFDNSVLISSGLHIKR 190
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
SQLYF+HFG+ +DY++A S IPL NF LT+ AL E+IG
Sbjct: 191 SQLYFEHFGVRATPIRADYMSATVSFIPLGYNFALTDFALHEWIGFWRY 239
>gi|207727627|ref|YP_002256021.1| lipoprotein [Ralstonia solanacearum MolK2]
gi|206590866|emb|CAQ56478.1| lipoprotein [Ralstonia solanacearum MolK2]
Length = 251
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ + ++ +IV+ L + R ++ L LF IG G +P LL L+ ++
Sbjct: 3 LPVLFLLVIVTAICALRRQRRTARGLAVVSLALFVAIGCGPVPAWLLDSLEGPFEARPAV 62
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
N IVLLG GT + +EP SY R+ E + Y++C++ C I++S
Sbjct: 63 A--WGKRNAIVLLGAGTRRVD----GGVEPGVFSYPRLMEAAQQYQACRKTDADCKILVS 116
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD + HG E+ VY L G++ D+ LE S++T+QNAQFS + + + +LV
Sbjct: 117 GGDARHHGDPEAAVYRRALQAIGIDAGDVLLEPNSMNTWQNAQFSRAALAAYAPERTVLV 176
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SSA HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 177 SSAIHLRRSLLYFTHFGMTPTPVRADDLQATPSPLPLAINFAMTDYALHEWIGIARYHV 235
>gi|148975915|ref|ZP_01812704.1| hypothetical protein VSWAT3_06376 [Vibrionales bacterium SWAT-3]
gi|145964660|gb|EDK29913.1| hypothetical protein VSWAT3_06376 [Vibrionales bacterium SWAT-3]
Length = 253
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 124/223 (55%), Gaps = 4/223 (1%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
LL F + F IG G IP LL LQ +Y+ S D N IVLLG
Sbjct: 17 RLLQWRATSTFLSLVLISSFVLIGSGFIPRYLLDDLQANYESK--SENQWSDNNAIVLLG 74
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT +I + EP+F SY RI ET YK C + C +IISGGD Q +G+ E+ +
Sbjct: 75 AGTQLIKSTQ--EFEPAFFSYGRISETASQYKDCAKSDTKCKVIISGGDAQGNGVTEAEI 132
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y +LL GV + DI E S++T++NAQ +S ++K+ Q NIILVSS H++RS+LYF
Sbjct: 133 YEQQLLRLGVPKADIIQEPNSVNTWKNAQLTSDLMKHHQFDNIILVSSGLHIRRSELYFN 192
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
HFG+ SDY+ A S +PL NF +T+ AL E IG
Sbjct: 193 HFGLEVIPVRSDYMAAQISWLPLWYNFAVTDFALHEQIGFARY 235
>gi|188575890|ref|YP_001912819.1| transmembrane [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520342|gb|ACD58287.1| transmembrane [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 253
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 135/241 (56%), Gaps = 7/241 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQ---SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ + ++ + L+ + +LL +G G +P+ +L HLQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRLGLRRFSRVLGLTSVLLVFAVGCGPLPSWMLHHLQHTGVNDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N+IVLLG GT A+ E + +Y RI E+ RLY+ C+ C I
Sbjct: 61 ---NAWGARNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESARLYQQCRHSGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGDP+ GL+E++VY L++ + + D+ +E S++T QNAQFS +++ + I+
Sbjct: 117 ISGGDPRGLGLSEAVVYRRVLVDLAIPQADVIMEPSSMNTLQNAQFSQPLLRAYRPDRIV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
LVSSA HL R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+G+
Sbjct: 177 LVSSATHLCRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGMARYR 236
Query: 238 Y 238
Sbjct: 237 L 237
>gi|207742020|ref|YP_002258412.1| lipoprotein [Ralstonia solanacearum IPO1609]
gi|206593406|emb|CAQ60333.1| lipoprotein [Ralstonia solanacearum IPO1609]
Length = 251
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ + ++ +IV+ L + R ++ L LF IG G +P LL L+ ++
Sbjct: 3 LPVLFLLVIVTAICALRRQRRTARGLAVVSLALFVAIGCGPVPAWLLDSLEGPFEARPAV 62
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
N IVLLG GT + +EP SY R+ E + Y++C++ C I++S
Sbjct: 63 A--WGKRNAIVLLGAGTRRVD----GGVEPGVFSYPRLMEAAQQYQACRKTDADCKILVS 116
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD + HG E+ VY L G++ D+ LE S++T+QNAQFS + + + +LV
Sbjct: 117 GGDARHHGDPEAAVYRRALQAIGIDAGDVLLEPNSMNTWQNAQFSRAALAAYAPERTVLV 176
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SSA HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 177 SSAIHLRRSLLYFTHFGMTPTPVRADDLQATPSPLPLAINFAMTDYALHEWIGIARYHV 235
>gi|125974798|ref|YP_001038708.1| hypothetical protein Cthe_2313 [Clostridium thermocellum ATCC
27405]
gi|256004933|ref|ZP_05429906.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|125715023|gb|ABN53515.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|255991113|gb|EEU01222.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941930|gb|ADU75964.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 251
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 16/242 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + S+W + + + I ++ L+ L+ YQ P
Sbjct: 19 IILLLAAASFWQYKKKDPKCTKLFVIITAILYLISTPMVCDSLIWSLEKKYQPPSEL--- 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+G++I++LG G + S + +R+ ++LY + IIISGG
Sbjct: 76 --NGDVIIMLGGGAFADTPNVNGKGHLSSIAANRLLTCVQLYYK-----LDVPIIISGGQ 128
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
H +E + N LL GV + I +E +SL+T QNA ++ ++ ILV+SA
Sbjct: 129 IPGHTTSEGEIAMNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNKPILVTSA 188
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIA 236
+H+KR+ F+ +N +DY + +P + ++KEY+GI+ +
Sbjct: 189 FHMKRAVKQFEKNEVNVIPYPTDYQTNSIRKITFMDFVPSAEALQKFYFSVKEYVGIVAS 248
Query: 237 YY 238
+
Sbjct: 249 RW 250
>gi|83720198|ref|YP_443090.1| hypothetical protein BTH_I2573 [Burkholderia thailandensis E264]
gi|83654023|gb|ABC38086.1| Uncharacterized ACR, COG1434 family [Burkholderia thailandensis
E264]
Length = 301
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ + L I G + L+ L + +P+ P
Sbjct: 63 ILFNSFGLLFVVFLLCRKRRGAFAILAAGIALLWLIASGWLAAPLVA-LAQAGVQPVTHP 121
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G + A P + +RI +T LY +C++ + CT+++SG
Sbjct: 122 MMTGN-TAIVMLGAGIKRRDGVAA----PPHDALARIDKTAELYSACQRTAKRCTVVVSG 176
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+ E+ Y LL GV D+ E+ S T++NA+F++ +++ ++ILV+
Sbjct: 177 GDPQVRGITEADTYAPYLLARGVANADLIRESSSHTTYENARFTAPILRAQHYDDLILVT 236
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FGI + ++ +A +P + N ELAL E IG+ +
Sbjct: 237 SSYQMKRALLDFRRFGIVPQPVYANRRDARLGWLPRAVNLVNAELALHEIIGVAQFHVYR 296
Query: 238 YRG 240
G
Sbjct: 297 RLG 299
>gi|300705462|ref|YP_003747065.1| lipoprotein [Ralstonia solanacearum CFBP2957]
gi|299073126|emb|CBJ44484.1| putative lipoprotein transmembrane [Ralstonia solanacearum
CFBP2957]
Length = 251
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 124/237 (52%), Gaps = 6/237 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + ++ + L Q + + LF IG G +P LL L+ ++
Sbjct: 5 VLFLLVIVTAICALRRQRRTARALAAVSLALFVAIGCGPVPAWLLDSLEGPFEARPAVA- 63
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
N IVLLG GT + +EP SY R+ E + Y++C++ C I++SGG
Sbjct: 64 -WGKRNAIVLLGAGTRRVD----GGVEPGVFSYPRLMEAAQQYQACRKTDADCKILVSGG 118
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D + HG E+ VY L G++ D+ LE S++T+QNAQFS + + + +LVSS
Sbjct: 119 DARHHGDPEAAVYRRALQAIGIDAADVLLEPNSMNTWQNAQFSRTALAAYAPERTVLVSS 178
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
A HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 179 AIHLRRSLLYFTHFGMTPTPVRADDLQATPSPLPLAINFAMTDYALHEWIGIARYHV 235
>gi|325916062|ref|ZP_08178352.1| hypothetical protein XVE_2286 [Xanthomonas vesicatoria ATCC 35937]
gi|325537738|gb|EGD09444.1| hypothetical protein XVE_2286 [Xanthomonas vesicatoria ATCC 35937]
Length = 253
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 88/241 (36%), Positives = 140/241 (58%), Gaps = 7/241 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ + ++ + LL + + F +LL IG G +P+ +L++LQ +
Sbjct: 1 MMLALVCVLFGFAWLLDRRGLRRFSRVLAGASLLLVLAIGCGPLPSWMLQNLQRTGVNDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N+IVLLG GT A+ E + +Y RI E+ RLY+ C+ C I
Sbjct: 61 ---NGWGARNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESARLYRQCRHSGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY L+ G++R D+ +E S++T+QNAQFS +++ + ++
Sbjct: 117 ISGGDARGLGLSEAVVYQRVLIGLGIDRADLIMEPSSMNTWQNAQFSQPLLRAHRPDRVV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 177 LVSSATHLRRAELYFRHFGIDAIPVRADWLTASWSILPQSYNFTLADVALHEYLGIARYQ 236
Query: 238 Y 238
Sbjct: 237 L 237
>gi|299068290|emb|CBJ39511.1| putative lipoprotein transmembrane [Ralstonia solanacearum CMR15]
Length = 251
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 127/239 (53%), Gaps = 7/239 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLS 59
+ + ++ +IV+ L Q R ++ L IG G +P LL L+ ++ +
Sbjct: 3 LPVLFLLVIVTAICALRQRRRTARGLAAVSLALVIAIGCGPVPAWLLDSLEGPFEARPVV 62
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
N IVLLG GT + +EP SY R+ E + Y++C++ C I++S
Sbjct: 63 --TWGKRNAIVLLGAGTRRV----EGGVEPGVFSYPRLMEAAQQYQACRKTGADCKILVS 116
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD + HG E+ VY L G+ DD+ LE S++T+QNAQFS + + + +LV
Sbjct: 117 GGDARHHGDPEAAVYQRALQAIGIGADDVLLEPNSMNTWQNAQFSRTALAAYAPERTVLV 176
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SSA HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 177 SSAIHLRRSLLYFAHFGMTPTPVRADDLQATPSPLPLAFNFAMTDYALHEWIGIARYHV 235
>gi|218709695|ref|YP_002417316.1| hypothetical protein VS_1706 [Vibrio splendidus LGP32]
gi|218322714|emb|CAV18890.1| conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 253
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 92/228 (40%), Positives = 127/228 (55%), Gaps = 4/228 (1%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
LL F + LF IG G+IP LL LQ +Y+R N IV
Sbjct: 14 GVTRLLQWRKTSSFIKLLLISLFVLIGSGLIPRYLLNDLQANYERKPDI--QWTSHNAIV 71
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
LLG GT +I + EP+F S+ RI ET YK+C + C +I+SGGD Q +G+ E
Sbjct: 72 LLGAGTQLIASTQ--EFEPTFFSFGRINETASQYKNCAKAQTICKVIVSGGDAQNNGVTE 129
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ VY +LL GV R DI E S++T++NAQ +S ++K+ Q NI+LVSS H++RS+L
Sbjct: 130 AEVYQQQLLRLGVPRADIIQEPNSVNTWKNAQLTSDLMKHHQFDNIVLVSSGLHIRRSEL 189
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
YF HFG+N +DY+ A S +PL NF +T+ AL E +G
Sbjct: 190 YFNHFGLNVIPLRADYMAAQISWLPLWYNFAVTDFALHEQLGFARYNL 237
>gi|300692848|ref|YP_003753843.1| lipoprotein transmembrane [Ralstonia solanacearum PSI07]
gi|299079908|emb|CBM10289.1| putative lipoprotein transmembrane [Ralstonia solanacearum PSI07]
Length = 251
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 83/237 (35%), Positives = 123/237 (51%), Gaps = 6/237 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + ++ + L Q + LF IG G +P LL L+ ++
Sbjct: 5 VLFLLVIVTAICALRRQRRTARGLAVVSLALFIAIGCGPVPAWLLDSLEGPFEARPAVA- 63
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
N IVLLG GT + +EP SY R+ E + Y++C++ C I++SGG
Sbjct: 64 -WGKRNAIVLLGAGTRRVD----GGVEPGVFSYPRLMEAAQQYQACRKTGADCKILVSGG 118
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D + HG E+ VY L G+ DD+ LE S++T+QNAQFS + + + +LVSS
Sbjct: 119 DARHHGDPEATVYQRALQAIGIGTDDVLLEPNSMNTWQNAQFSRAALAAYAPERTVLVSS 178
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
A HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 179 AIHLRRSLLYFTHFGMMPTPMRADDLQATPSPLPLAINFAMTDYALHEWIGIARYHV 235
>gi|260459193|ref|ZP_05807448.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259034747|gb|EEW36003.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 265
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 12/244 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L ++ L ++ + + L+ + W + ++L L+ + RP L
Sbjct: 18 LTIFLLLAGLIAGMVGRRRLAVTGSVLAFLILALSAWTSLGAMMLNPLEERFARPPL--- 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LG G + E S S R+ ET L + Q + + G
Sbjct: 75 -PQKVDGIVVLGGGFEGAINLTRGGYELS-SSGDRMVETAILARRFPQAKVVVSG--GNG 130
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G ++ L GV D + LE +S +T++NA FS +++ G+ +LV+S
Sbjct: 131 SLFLDGEGDADTAPRLLGPLGVSADRLVLEDKSRNTYENAVFSRKLVEPKPGETWLLVTS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F G T DY + + + T +A++E+IG+
Sbjct: 191 AFHMPRAKALFDKAGFPTVPWPVDYRTSGKEGVGLFRDNAADSLENTTMAIREWIGLFAY 250
Query: 237 YYRG 240
+ G
Sbjct: 251 WLSG 254
>gi|282896704|ref|ZP_06304712.1| hypothetical protein CRD_01413 [Raphidiopsis brookii D9]
gi|281198422|gb|EFA73310.1| hypothetical protein CRD_01413 [Raphidiopsis brookii D9]
Length = 263
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 100/252 (39%), Gaps = 22/252 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L+++ L + + + + G G + L+ L++ + P
Sbjct: 18 LASVSLVIALVSLWKRPKIAAVCIGTSLAILMIAGNGWVSKALVGSLEWQ----NIPPGK 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG T P +S R+ +LY K + + D
Sbjct: 74 IPEAEAIVVLGGATK--PAAWPRSTVDLNESGDRVIYAAQLYGQKKAPLIILSG--GRID 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ G ES L+ G+ + I E SL+T++NA ++++ K ++LV+SA
Sbjct: 130 WRGSGPPESADMAAILISLGIPPEVIIEEPNSLNTYENAVNVRKILESRGIKKVLLVTSA 189
Query: 183 YHLKRSQLYFQHFGINTKASCSDY--------------LNAYYSIIPLSANFYLTELALK 228
H RS FQ G+ + +D+ + ++ P + N ALK
Sbjct: 190 MHTPRSLKIFQRQGVEVIPAPTDFIVSRSDLEELIATPKSTILNLFPSADNLNDFTNALK 249
Query: 229 EYIGILIAYYRG 240
EYIG L+ RG
Sbjct: 250 EYIGYLVYALRG 261
>gi|289668714|ref|ZP_06489789.1| hypothetical protein XcampmN_09524 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 253
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 137/241 (56%), Gaps = 7/241 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ + ++ + L+ + + F +LL +G G +P+ +L+ LQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRRGLRRFSRVLGLTSLLLVFAVGCGPLPSWMLQRLQHTGVNDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N+IVLLG GT A+ E + +Y RI E+ RLY+ C+ C I
Sbjct: 61 ---NAWGGRNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESARLYQQCRHSGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY L+ + + D+ LE S++T+QNAQFS +++ + I+
Sbjct: 117 ISGGDARGLGLSEAVVYQRVLVGLAIPQADLILEPSSMNTWQNAQFSQPLLRAYRPDRIV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 177 LVSSATHLRRAELYFRHFGIDATPVRADWLTASWSILPQSYNFTLADVALHEYLGIARYQ 236
Query: 238 Y 238
Sbjct: 237 L 237
>gi|289661763|ref|ZP_06483344.1| hypothetical protein XcampvN_01352 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 253
Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 135/241 (56%), Gaps = 7/241 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQS---IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ + ++ + L+ + +LL +G G +P+ +L+ LQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRRGLRRLSRVLGLTSLLLVFAVGCGPLPSWMLQRLQHTGVNDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N+IVLLG GT A+ E + +Y RI E+ RLY+ C+ C I
Sbjct: 61 ---NAWGGRNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESARLYQQCRHSGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY L+ + + D+ LE S++T+QNAQFS +++ + I+
Sbjct: 117 ISGGDARGLGLSEAVVYQRVLVGLAIPQADLILEPSSMNTWQNAQFSQPLLRAYRPDRIV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 177 LVSSATHLRRAELYFRHFGIDATPVRADWLTASWSILPQSYNFTLADVALHEYLGIARYQ 236
Query: 238 Y 238
Sbjct: 237 L 237
>gi|320161712|ref|YP_004174937.1| hypothetical protein ANT_23110 [Anaerolinea thermophila UNI-1]
gi|319995566|dbj|BAJ64337.1| hypothetical protein ANT_23110 [Anaerolinea thermophila UNI-1]
Length = 264
Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 29/258 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKI-FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L ++++ ++IR F + + + T L + L++ Y L
Sbjct: 15 PLGMALVLLALSLFKWKNIRWRNLFTGLALFILLVSSNRWVATTLARSLEWQY----LPN 70
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +V+LG GT P P + R+ LY+ K +I+SG
Sbjct: 71 EPISSAPAMVVLGGGTE--PAFPPRSQPEVNSAGDRVLYAAALYQQGKA----PLVIVSG 124
Query: 121 GDPQKHGL---AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
G+ G + + L GV + I E QS +T++NA + + ++K + +I
Sbjct: 125 GNVAFRGEQSSTPASDMRHLLKMLGVPPEAILEEDQSQNTYENALYCAKLLKERHIQRVI 184
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI---------------IPLSANFYL 222
LV+SA H+ RS F+ GI + +D+ + +P S+N L
Sbjct: 185 LVTSALHMPRSVKLFEKQGIEVIPAPADFAVPFQEWEDLLHAPIPAQLVALLPSSSNLQL 244
Query: 223 TELALKEYIGILIAYYRG 240
T L EYIGIL+ + RG
Sbjct: 245 TTNVLHEYIGILVYWMRG 262
>gi|161524938|ref|YP_001579950.1| hypothetical protein Bmul_1765 [Burkholderia multivorans ATCC
17616]
gi|160342367|gb|ABX15453.1| protein of unknown function DUF218 [Burkholderia multivorans ATCC
17616]
Length = 281
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 71/243 (29%), Positives = 129/243 (53%), Gaps = 10/243 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L F+++ LLC+ R+ ++ + LF I G + + + + P+ P
Sbjct: 44 LILFDSFVLLFIGFLLCRKQRRRIALA-AVALFWLIASGWLAAPFIAWAEAGVE-PVEHP 101
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++++LG GT + P +RI + LY+SC++ + CT+++SG
Sbjct: 102 DMHGQ-TVLIVLGAGTQRADDG----LRPPRDGAARIRKAAELYRSCRRQAERCTVVMSG 156
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ HG E+ VY L+ +GV+ D+ LE +S T++NAQF++S++++ + IL++
Sbjct: 157 GDPQHHGDTEAAVYGRGLVAAGVDPGDLVLEPKSRTTYENAQFTTSILRSRRDDARILIT 216
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y ++R+ L F+ FGI+ + ++ A +P +N TE AL E IGI +
Sbjct: 217 SSYQMRRALLDFRRFGIDPQPVFANRREAQTGWLPRWSNVVATEFALHELIGIAQFHVYR 276
Query: 238 YRG 240
G
Sbjct: 277 LIG 279
>gi|254412764|ref|ZP_05026537.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196180499|gb|EDX75490.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 263
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 22/252 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + ++V+ + ++ +++ G + +++ L++ + P PQ
Sbjct: 18 LACVLMVVALVLSWKRPRLVPIPIALGLIILLVASNGWVANSMVQSLEWQHIPPTELPQ- 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
IV+LG T IP ++ R+F +LY+ K + + +
Sbjct: 77 ---AEAIVILGGATRSA--IPPRPAPDLNEAGDRVFYGAQLYQQGKAPVIIASG--GRIE 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ G ES L GV I + SL+T QNA +++ K ++LV+SA
Sbjct: 130 WRGGGSPESADMAQILEMIGVPPSAILQDPASLNTHQNAVNVRRILQQEGIKKVLLVTSA 189
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSI--------------IPLSANFYLTELALK 228
H R+ FQ GI + +D+L + +P + N +T A+K
Sbjct: 190 MHTPRALRVFQRQGIEAIPAPTDFLVTQQELNEPNSSLAAILLNGLPDAQNLDMTTRAIK 249
Query: 229 EYIGILIAYYRG 240
EYIG + + RG
Sbjct: 250 EYIGTAVYWLRG 261
>gi|21242461|ref|NP_642043.1| hypothetical protein XAC1712 [Xanthomonas axonopodis pv. citri str.
306]
gi|21107907|gb|AAM36579.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 253
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 89/239 (37%), Positives = 138/239 (57%), Gaps = 7/239 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ + ++ + L+ + + F +LL +G G +P+ +L+HLQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRRGLRRFSRVLGLASLLLVFAVGCGPLPSWMLQHLQRTGVNDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N+IVLLG GT A+ E + +Y RI E+ RLY C+ C I
Sbjct: 61 ---NAWGARNVIVLLGAGTVRPEGRDAV-AEANLFAYGRIVESARLYWQCRHSGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY LL G+ R D+ +E S++T+QNAQFS ++++ + I
Sbjct: 117 ISGGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPSSMNTWQNAQFSQPLLRDYRPDRIA 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 177 LVSSATHLRRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGIARY 235
>gi|188996942|ref|YP_001931193.1| protein of unknown function DUF218 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932009|gb|ACD66639.1| protein of unknown function DUF218 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 242
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 24/242 (9%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L IFLI++Y+ + + I S + I + LLK L+ +Q+P
Sbjct: 17 LFVLIFLIIAYFSRNNKRVLTISLASAISI--YLISIEPVKDFLLKPLEAKFQQPKNIS- 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
G++IV+LG G+ + S R+ L+ ++ II+SGG
Sbjct: 74 ----GDVIVVLGGGSYN-------TGILTEDSLKRVLTGFVLH-----KRLNVPIILSGG 117
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ L ES + L E G+++ I + QS DT +NA F+ + K K +ILV+S
Sbjct: 118 SAITN-LPESEAMKSLLAELGIDKKMIFTDVQSRDTLENAFFTKKICKKYGYKTVILVTS 176
Query: 182 AYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
AYH+ RS + F+ G+N +D+ YS P + A++EYIG+ Y
Sbjct: 177 AYHMPRSYMTFKQAGLNVIPYPTDFKMDKKYTVYSYFPKMNVLQDSTKAIREYIGLFAYY 236
Query: 238 YR 239
R
Sbjct: 237 LR 238
>gi|83814701|ref|YP_445779.1| hypothetical protein SRU_1660 [Salinibacter ruber DSM 13855]
gi|83756095|gb|ABC44208.1| Uncharacterized ACR, COG1434 family [Salinibacter ruber DSM 13855]
Length = 281
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 47/243 (19%), Positives = 94/243 (38%), Gaps = 11/243 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + + + + +L+ ++ L L+ + P
Sbjct: 18 LGMLLVGTGIVVGNWWRRSGMALLVGGVLVLWVASAPLVSDWLRGRLEGQH--PPTRVDS 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
V+LG G P P + R++ RLY + K + +
Sbjct: 76 LPSAEAAVVLGGGV--SPPRPPRIHPDLNDAADRVWHAARLYHAGKVPLVIASGGTQP-- 131
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++ E+ N L + GV D I LE++S +T++NA ++ ++ ++LV+SA
Sbjct: 132 WKRPDAREAPATNVLLQDWGVPGDAILLESKSANTYENATRTAELLDRRGLNCVLLVTSA 191
Query: 183 YHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAY 237
H+ R+ F+ GI + +D ++P + + A++EY+G L+
Sbjct: 192 LHMPRALAVFRSAGIKAVPAPTDVQVGDRNYTVLDVLPDAGALAGSTAAIREYVGYLVYD 251
Query: 238 YRG 240
+RG
Sbjct: 252 WRG 254
>gi|282900121|ref|ZP_06308078.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
gi|281195003|gb|EFA69943.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
Length = 263
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 100/252 (39%), Gaps = 22/252 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ I L+++ L + ++ + + G G + L+ L++ + +
Sbjct: 18 LASISLVIALIILWKRPKIAAGWIGISLAILIISGNGWVSKSLVASLEWQ----NIPLEK 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
IV+LG T P +S R+ +LY K + + D
Sbjct: 74 IPQAEAIVVLGGATK--PAAWPRSTVDLNESGDRVIYAAQLYGQKKAPLIILSG--GRID 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ G ES L+ G+ + I E SL+T++NA ++++ K ++LV+SA
Sbjct: 130 WRGGGTPESADMATILISLGIPPEVIIEEPNSLNTYENAVNVKKILESRGIKKVLLVTSA 189
Query: 183 YHLKRSQLYFQHFGINTKASCSDY--------------LNAYYSIIPLSANFYLTELALK 228
H RS FQ G+ + +D+ + ++ P + N ALK
Sbjct: 190 MHTPRSLKIFQRQGVEVIPAPTDFIVSRSDLEELIATPKSTILNLFPSADNLNDFTNALK 249
Query: 229 EYIGILIAYYRG 240
EYIG L+ RG
Sbjct: 250 EYIGYLVYALRG 261
>gi|166712483|ref|ZP_02243690.1| hypothetical protein Xoryp_13775 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 253
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 138/241 (57%), Gaps = 7/241 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQ---SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+++ + ++ + L+ + +LL +G G +P+ +L HLQ + +
Sbjct: 1 MMMALVCVLFGFAWLIHRLGLRRFSRVLGLTSVLLVFAVGCGPLPSWMLHHLQHT---GV 57
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N+IVLLG GT + P + E + +Y RI E+ RLY+ C+ C I
Sbjct: 58 SDFNAWGARNVIVLLGAGT-VRPEGRDVVAEANMFAYGRIVESARLYQQCRHSGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGDP+ GL+E++VY L+ + + D+ +E S++T+QNAQFS +++ + I+
Sbjct: 117 ISGGDPRGLGLSEAVVYRRVLVGLAIPQADVIIEPSSMNTWQNAQFSQPLLRAYRPDRIV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
LVSSA HL R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+G+ +
Sbjct: 177 LVSSATHLCRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGMARYW 236
Query: 238 Y 238
Sbjct: 237 L 237
>gi|86146806|ref|ZP_01065126.1| hypothetical protein MED222_15709 [Vibrio sp. MED222]
gi|85835456|gb|EAQ53594.1| hypothetical protein MED222_15709 [Vibrio sp. MED222]
Length = 253
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 131/238 (55%), Gaps = 4/238 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L I + V L F + LF IG G+IP LL LQ +Y+R
Sbjct: 4 IILLLILVFVGVTRLFQWRKTSSFIKLLLISLFILIGSGLIPRYLLNDLQANYERKPDI- 62
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
N I LLG GT +I + EP+F S+ RI ET YK+C + C +I+SG
Sbjct: 63 -QWTSHNAIFLLGAGTQLIASTQ--EFEPTFFSFGRINETASQYKNCAKAQTICKVIVSG 119
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD Q +G+ E+ VY +LL GV DI E+ S++T++NAQ +S ++K+ Q NI+LVS
Sbjct: 120 GDAQNNGVTEAEVYQQQLLRLGVPLADIIQESNSVNTWKNAQLTSDLMKHHQFDNIVLVS 179
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S H++RS+LYF HFG+N +DY+ A S +PL NF +T+ AL E +G
Sbjct: 180 SGLHIRRSELYFNHFGLNVIPVRADYMAAQISWLPLWYNFAVTDFALHEQLGFARYNL 237
>gi|325924933|ref|ZP_08186362.1| hypothetical protein XPE_0280 [Xanthomonas perforans 91-118]
gi|325544656|gb|EGD16010.1| hypothetical protein XPE_0280 [Xanthomonas perforans 91-118]
Length = 253
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 89/239 (37%), Positives = 137/239 (57%), Gaps = 7/239 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ + ++ + L+ + + F +LL +G G +P+ +L+HLQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRRGLRRFSRVLGLASLLLVFAVGCGPLPSWMLQHLQRTGVNDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N+IVLLG GT A+ E + +Y RI E+ RLY C+ C I
Sbjct: 61 ---NAWGARNVIVLLGAGTVRPEGRDAV-AEANLFAYGRIVESARLYWQCRHSGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY LL G+ R D+ +E S++T+QNAQFS +++ + I
Sbjct: 117 ISGGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPSSMNTWQNAQFSQPLLRAYRPDRIA 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 177 LVSSATHLRRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGIARY 235
>gi|254252544|ref|ZP_04945862.1| hypothetical protein BDAG_01779 [Burkholderia dolosa AUO158]
gi|124895153|gb|EAY69033.1| hypothetical protein BDAG_01779 [Burkholderia dolosa AUO158]
Length = 303
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 126/243 (51%), Gaps = 10/243 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L F+++ +LC+ R+ F + LF + G + L+ + P+ P
Sbjct: 66 LILFDSFVLLFICFMLCRKQRR-FIAIAAVALFWLLSAGWLAAPLIAWAEAG-VTPVERP 123
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +I L+G GT T ++P +RI + LY++C+Q + HCT+++SG
Sbjct: 124 EMRGQTTLI-LIGAGTHRTGTG----LQPPPDGNARIVKIAALYRACRQRAAHCTVVMSG 178
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ HG E+ VY +L+ G+ D+ LE S T++NA+F++S++++ ILV+
Sbjct: 179 GDPQHHGETEAAVYGRQLVAEGIAPADLVLEPNSRTTYENAKFTASILRSRHDDARILVT 238
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y ++R+ L F+ FGI+ + ++ +P N + AL E IGI +
Sbjct: 239 SSYQMRRALLDFRRFGIDPQPVYANRRTPRTGWLPRWRNLVNADQALHELIGIAQFHVYR 298
Query: 238 YRG 240
G
Sbjct: 299 RLG 301
>gi|167570139|ref|ZP_02363013.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis C6786]
Length = 240
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 67/243 (27%), Positives = 119/243 (48%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + I + + L I G + L+ + RP+ P
Sbjct: 2 ILFNTFGLLFVVFLLCRKRRGAIAILVAGVALLWLIASGWLAAPLVALAESG-VRPVARP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G + A P+ + +RI +T LY +C++ + CT+++SG
Sbjct: 61 TMTGN-TAIVMLGAGIKRRDGVAA----PTHDALARIDKTAELYSACQRTAARCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+ E+ Y LL GV D+ E +S T++NA+F++++++ ++ILV+
Sbjct: 116 GDPQFRGITEADTYARYLLARGVANGDLIREQRSHTTYENARFTAAILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y ++R+ L F FGI + ++ A +P + N E AL E +GI +
Sbjct: 176 SSYQMRRALLDFARFGIAPQPVYANRRVAQLGWLPRTGNLVNAEQALHEILGIAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|167562950|ref|ZP_02355866.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis EO147]
Length = 240
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + I + + L I G + L+ + RP+ P
Sbjct: 2 ILFNTFGLLFVVFLLCRKRRGAIAILVAGVALLWLIASGWLAAPLVTLAESG-VRPVARP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G + A P+ + +RI +T LY +C++ + CT+++SG
Sbjct: 61 TMTGN-TAIVMLGAGIKRRDGVAA----PTHDALARIDKTAELYSACQRTAARCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+ E+ Y LL GV D+ E +S T++NA+F++++++ ++ILV+
Sbjct: 116 GDPQFRGITEADTYARYLLARGVANGDLIREQRSHTTYENARFTAAILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y ++R+ L F FGI + ++ A + +P + N E AL E +GI +
Sbjct: 176 SSYQMRRALLDFARFGIAPQPVYANRRVAQFGWLPRTGNLVNAEQALHEILGIAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|189350313|ref|YP_001945941.1| hypothetical protein BMULJ_01475 [Burkholderia multivorans ATCC
17616]
gi|189334335|dbj|BAG43405.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 238
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 72/243 (29%), Positives = 129/243 (53%), Gaps = 10/243 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+L F+++ LLC+ R+ ++ + LF I G + + + + P+ P
Sbjct: 1 MILFDSFVLLFIGFLLCRKQRRRIALA-AVALFWLIASGWLAAPFIAWAEAGVE-PVEHP 58
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++++LG GT + P +RI + LY+SC++ + CT+++SG
Sbjct: 59 DMHGQ-TVLIVLGAGTQRADDG----LRPPRDGAARIRKAAELYRSCRRQAERCTVVMSG 113
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ HG E+ VY L+ +GV+ D+ LE +S T++NAQF++S++++ + IL++
Sbjct: 114 GDPQHHGDTEAAVYGRGLVAAGVDPGDLVLEPKSRTTYENAQFTTSILRSRRDDARILIT 173
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y ++R+ L F+ FGI+ + ++ A +P +N TE AL E IGI +
Sbjct: 174 SSYQMRRALLDFRRFGIDPQPVFANRREAQTGWLPRWSNVVATEFALHELIGIAQFHVYR 233
Query: 238 YRG 240
G
Sbjct: 234 LIG 236
>gi|294626655|ref|ZP_06705252.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665846|ref|ZP_06731114.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599075|gb|EFF43215.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604356|gb|EFF47739.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 252
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 88/237 (37%), Positives = 136/237 (57%), Gaps = 7/237 (2%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+ + ++ + L+ + + F +LL +G G +P+ +L+HLQ +
Sbjct: 2 LALVCVLFGFAWLIDRRGLRRFSRVLGLASLLLVFAVGCGPLPSWMLQHLQRTGVNDF-- 59
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
N+IVLLG GT A+ E + +Y RI E+ RLY C+ C I IS
Sbjct: 60 -NAWGARNVIVLLGAGTVRPEGRDAV-AEANLFAYGRIVESARLYWQCRHSGGDCKIEIS 117
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD + GL+E++VY LL G+ R D+ +E S++T+QNAQFS ++++ + I LV
Sbjct: 118 GGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPSSMNTWQNAQFSQPLLRDYRPDRIALV 177
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
SSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 178 SSATHLRRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGIARY 234
>gi|254185037|ref|ZP_04891626.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|184215629|gb|EDU12610.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
Length = 298
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 126/239 (52%), Gaps = 6/239 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ + L+ + + + F IG G++P LL+ LQ Y
Sbjct: 48 LLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYA--ARPAI 105
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIIS 119
+ N IV+LG GT +EP SYSR+ E LY+ C++ C I++S
Sbjct: 106 EWGERNAIVMLGLGTE--KIAATGAVEPGTFSYSRVVEAASLYRDCRRARADADCKILVS 163
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + + ++LV
Sbjct: 164 GGDARRNGVPEASVYRDALVGVGIDSADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLV 223
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 224 TSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRL 282
>gi|309780144|ref|ZP_07674895.1| membrane protein [Ralstonia sp. 5_7_47FAA]
gi|308920847|gb|EFP66493.1| membrane protein [Ralstonia sp. 5_7_47FAA]
Length = 262
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 126/235 (53%), Gaps = 6/235 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + ++ + + +L IG G +P LL L+ ++
Sbjct: 16 ILCVLVIVATVCAARGRRRAARGLAVFSGVLVIAIGCGPVPAWLLDSLEKPFEN--EPHV 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
N IVLLG GT + +EP SY R+ ET +LY++C++ C I++SGG
Sbjct: 74 QWGARNAIVLLGAGTFRV----GDSVEPGLFSYPRLVETTQLYQACRKSDGDCKILVSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D + HG E+ VY +L+ GV +DD+ +E QS++T+QNAQFS +++ +LVSS
Sbjct: 130 DARHHGSPEATVYQRELVRLGVAKDDVLIEPQSMNTWQNAQFSRTVLAQYGADRTVLVSS 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
A HL+RS LYF HFG+ +D L A S +P++ NF LT+ AL E+IGI
Sbjct: 190 AIHLRRSLLYFTHFGMAPVPVRADDLQAAASPLPMAYNFALTDFALHEWIGIARY 244
>gi|187927155|ref|YP_001897642.1| hypothetical protein Rpic_0045 [Ralstonia pickettii 12J]
gi|187724045|gb|ACD25210.1| protein of unknown function DUF218 [Ralstonia pickettii 12J]
Length = 266
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 126/235 (53%), Gaps = 6/235 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + ++ + + +L IG G +P LL L+ ++
Sbjct: 20 ILCVLVIVATVCAARGRRRAARGLAVFSGVLVIAIGCGPVPAWLLDSLEKPFEN--EPHV 77
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
N IVLLG GT + +EP SY R+ ET +LY++C++ C I++SGG
Sbjct: 78 QWGARNAIVLLGAGTFRV----GDSVEPGLFSYPRLVETTQLYQACRKSDGDCKILVSGG 133
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D + HG E+ VY +L+ GV +DD+ +E QS++T+QNAQFS +++ +LVSS
Sbjct: 134 DARHHGSPEATVYQRELVRLGVAKDDVLIEPQSMNTWQNAQFSRTVLAQYGADRTVLVSS 193
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
A HL+RS LYF HFG+ +D L A S +P++ NF LT+ AL E+IGI
Sbjct: 194 AIHLRRSLLYFTHFGMAPVPVRADDLQAAASPLPMAYNFALTDFALHEWIGIARY 248
>gi|186681117|ref|YP_001864313.1| hypothetical protein Npun_F0616 [Nostoc punctiforme PCC 73102]
gi|186463569|gb|ACC79370.1| protein of unknown function DUF218 [Nostoc punctiforme PCC 73102]
Length = 263
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 22/252 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L+V+ L + ++ + L F I L++ L++ L
Sbjct: 18 LACVSLVVALVTLWKRPRTAAIAIAFALTLLLFCSNAWIAKSLVRSLEWQ----NLPLAQ 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
IV+LG T P +S R+ +LY+ + + + D
Sbjct: 74 IPVAEAIVVLGGATKSA--FPPRPTVDLSESGDRVIYAAQLYRQKRAPIIILSG--GRID 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ G ES L G+ + I E +SL+T+QNA ++++ ++LV+SA
Sbjct: 130 WRGGGSPESADMATILTSIGIPSEAIVQEPESLNTYQNAVNVRKILESRGINQVLLVTSA 189
Query: 183 YHLKRSQLYFQHFGINTKASCSDY--------------LNAYYSIIPLSANFYLTELALK 228
H+ RS FQ GIN + +D+ A +++P + N + ALK
Sbjct: 190 MHMPRSLNIFQRQGINVIPAPTDFLVSQGELQELGGTPKAAILNLLPDTDNLHQFTSALK 249
Query: 229 EYIGILIAYYRG 240
EYIG LI RG
Sbjct: 250 EYIGSLIYRLRG 261
>gi|37523632|ref|NP_927009.1| hypothetical protein gll4063 [Gloeobacter violaceus PCC 7421]
gi|35214637|dbj|BAC92004.1| gll4063 [Gloeobacter violaceus PCC 7421]
Length = 260
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 11/245 (4%)
Query: 3 LSWIFLIVSY-WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LS + I + ++ + +L + LL L+ Y P + +
Sbjct: 18 LSLVLTIAAATAIRFGRTKLATWLCGAIVLWLGSFSAPAVADALLWSLESQY--PEVPVE 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
IV+LG + R +S R+ RL+K+ K + +
Sbjct: 76 NNPSAQAIVVLGGALHL--PNARHRTYELAESSDRVLHAARLFKAGKAPVVLMSGGNPPF 133
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E+ E GV I E +S +TFQNA FS+ ++K + I+LV+S
Sbjct: 134 HTRPDQPPEATQMAAFARELGVPAGAILTEERSWNTFQNAAFSAEVLKARRMTRILLVTS 193
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGILI 235
A H+ RS F+ G A+ +D + + +P +A + LALKE++G+L+
Sbjct: 194 ASHMPRSVAIFERAGFAVIAASTDVRSGTDLDDWLLAWLPSAAALESSTLALKEWVGLLV 253
Query: 236 AYYRG 240
RG
Sbjct: 254 YRLRG 258
>gi|217422760|ref|ZP_03454263.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|226200064|ref|ZP_03795613.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242312781|ref|ZP_04811798.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254186269|ref|ZP_04892787.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254194017|ref|ZP_04900449.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|254201133|ref|ZP_04907498.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254262741|ref|ZP_04953606.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|254301320|ref|ZP_04968764.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|254359227|ref|ZP_04975499.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|147748745|gb|EDK55820.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|148028414|gb|EDK86374.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|157811319|gb|EDO88489.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|157933955|gb|EDO89625.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|169650768|gb|EDS83461.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|217394991|gb|EEC35010.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|225927916|gb|EEH23954.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242136020|gb|EES22423.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254213743|gb|EET03128.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 298
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 126/239 (52%), Gaps = 6/239 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ + L+ + + + F IG G++P LL+ LQ Y
Sbjct: 48 LLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYA--ARPAI 105
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIIS 119
+ N IV+LG GT +EP SYSR+ E LY+ C++ C I++S
Sbjct: 106 EWGERNAIVMLGLGTE--KIAATGAVEPGTFSYSRVVEAASLYRDCRRARADADCKILVS 163
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + + ++LV
Sbjct: 164 GGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLV 223
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 224 TSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRL 282
>gi|119512087|ref|ZP_01631180.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
gi|119463245|gb|EAW44189.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
Length = 263
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 22/249 (8%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I LIV+ L + +S + L + L++ L++ Y P P +
Sbjct: 21 ISLIVALVTLWKRPRIAAIAISLALTLLLVCSNAWVAKSLVRSLEWQYLPPNPVP----N 76
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
IV+LG T P ++ R+ +LY+ K + + D +
Sbjct: 77 AEAIVVLGGATKSA--YPPRPTVDLSETGDRVIYAAQLYRQNKAPIIILSG--GRIDWRG 132
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
G +ES N L G+ + I E SL+T+QNA ++++ ++LV+SA H+
Sbjct: 133 GGESESADMANVLTSIGIPSEVIVQEPDSLNTYQNAVNVKKILESRGIGKVLLVTSAMHM 192
Query: 186 KRSQLYFQHFGINTKASCSDY--------------LNAYYSIIPLSANFYLTELALKEYI 231
RS FQ GIN A+ +D+ A +++P S N ALKEYI
Sbjct: 193 PRSIQIFQRQGINAIAAPTDFLVSQGELQELSSTPKAAILNLLPDSNNLQQFTSALKEYI 252
Query: 232 GILIAYYRG 240
G + +RG
Sbjct: 253 GSFVYSWRG 261
>gi|78047302|ref|YP_363477.1| hypothetical protein XCV1746 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035732|emb|CAJ23423.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 252
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 88/237 (37%), Positives = 135/237 (56%), Gaps = 7/237 (2%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+ + ++ + L+ + + F +LL +G G +P+ +L+HLQ +
Sbjct: 2 LALVCVLFGFAWLIDRRGLRRFSRVLGLASLLLVFAVGCGPLPSWMLQHLQRTGVNDF-- 59
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
N+IVLLG GT A+ E + +Y RI E+ RLY C+ C I IS
Sbjct: 60 -NAWGARNVIVLLGAGTVRPEGRDAV-AEANLFAYGRIVESARLYWQCRHSGGDCKIEIS 117
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD + GL+E++VY LL G+ R D+ +E S++T+QNAQFS +++ + I LV
Sbjct: 118 GGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPSSMNTWQNAQFSQPLLRAYRPDRIALV 177
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
SSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 178 SSATHLRRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGIARY 234
>gi|170732816|ref|YP_001764763.1| hypothetical protein Bcenmc03_1466 [Burkholderia cenocepacia MC0-3]
gi|169816058|gb|ACA90641.1| protein of unknown function DUF218 [Burkholderia cenocepacia MC0-3]
Length = 260
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 124/243 (51%), Gaps = 10/243 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L F+++ +LC+ R+ + L F + G + L+ + P+ P
Sbjct: 23 LILFDSFVLLFIGFMLCRKQRRTISIVAAAL-FWLLATGWLAAPLIAWTEAG-VTPVEHP 80
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+I L+G GT + ++P +RI + LY++C+Q + CT+++SG
Sbjct: 81 DMHGRTTLI-LIGAGTHRTDSG----LQPPPDGVARIHKVAALYRTCRQQAERCTVVMSG 135
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ HG E+ VY +L+ GV D+ LE S T++NA+F++S++++ +LV+
Sbjct: 136 GDPQHHGDTEAAVYGRQLVAQGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVT 195
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y ++R+ L F+ FGI+ + ++ A +P N E AL E IGI +
Sbjct: 196 SSYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELIGIAQFHVYR 255
Query: 238 YRG 240
+ G
Sbjct: 256 WLG 258
>gi|15606980|ref|NP_214362.1| hypothetical protein aq_1986 [Aquifex aeolicus VF5]
gi|2984233|gb|AAC07762.1| hypothetical protein aq_1986 [Aquifex aeolicus VF5]
Length = 241
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 23/245 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + + L + F L I I +L+ L+ Y++P +
Sbjct: 13 LPPGIYVIAFLFISFLSKGKFLRRFALLCALSLYLISVEPIKDLLIYPLENYYKKPEVL- 71
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
G+ IV+LG G S+ R+ LYK K+ II
Sbjct: 72 ----KGDAIVVLGGGVYNN-------GRLKASSFKRLITGFLLYKELKKP------IILS 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILV 179
G + + E+ V L GV +DI + +S DTF+NA+F M + + + K +ILV
Sbjct: 115 GGASINVIPEAKVMKELLRSFGVPEEDIYTDVRSRDTFENAKFVKEMCEKLLKCKEVILV 174
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL----NAYYSIIPLSANFYLTELALKEYIGILI 235
+S +H+ R+ F+ G+ +D YS+ P + FY + +A++EYIG+L
Sbjct: 175 TSGFHMPRAVGVFKKAGLEVIPYPTDLKFEGKYNVYSLFPKYSVFYDSSIAIREYIGLLF 234
Query: 236 AYYRG 240
+G
Sbjct: 235 YKLKG 239
>gi|167620257|ref|ZP_02388888.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis Bt4]
Length = 240
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ + L I G + L+ L + +P+ P
Sbjct: 2 ILFNSFGLLFVVFLLCRKRRGAFAILTAGIALLWLIASGWLAAPLVA-LAQAGVQPVTHP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G + A P + +RI +T LY +C++ + CT+++SG
Sbjct: 61 MMTGN-TAIVMLGAGIKRRDGVAA----PPHDALARIDKTAELYSACQRTAKRCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+ E+ Y LL GV D+ E+ S T++NA+F++ +++ ++ILV+
Sbjct: 116 GDPQVRGITEADTYAPYLLARGVANADLIRESSSHTTYENARFTAPILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FGI + ++ +A +P + N ELAL E IG+ +
Sbjct: 176 SSYQMKRALLDFRRFGIVPQPVYANRRDARLGWLPRAVNLVNAELALHEIIGVAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|167582098|ref|ZP_02374972.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis TXDOH]
gi|257139318|ref|ZP_05587580.1| hypothetical protein BthaA_08969 [Burkholderia thailandensis E264]
Length = 240
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ + L I G + L+ L + +P+ P
Sbjct: 2 ILFNSFGLLFVVFLLCRKRRGAFAILAAGIALLWLIASGWLAAPLVA-LAQAGVQPVTHP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G + A P + +RI +T LY +C++ + CT+++SG
Sbjct: 61 MMTGN-TAIVMLGAGIKRRDGVAA----PPHDALARIDKTAELYSACQRTAKRCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+ E+ Y LL GV D+ E+ S T++NA+F++ +++ ++ILV+
Sbjct: 116 GDPQVRGITEADTYAPYLLARGVANADLIRESSSHTTYENARFTAPILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FGI + ++ +A +P + N ELAL E IG+ +
Sbjct: 176 SSYQMKRALLDFRRFGIVPQPVYANRRDARLGWLPRAVNLVNAELALHEIIGVAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|225849301|ref|YP_002729465.1| hypothetical protein SULAZ_1499 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644421|gb|ACN99471.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 242
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 23/243 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCF-MLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ +I S + RKIF +S + + LL+ L+ Y P
Sbjct: 13 LPPGLFIVIFSVIAYFGRKDRKIFIVSFLSAFFIYLLSIEPVKDSLLRPLETKYPIP--- 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K +G++IV+LG G+ + S R+ L+K ++ II+S
Sbjct: 70 --NKLNGDVIVVLGGGSYN-------TGILTEDSLKRVLTGFVLHKK-----LNLPIILS 115
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG + L E+ V N L E GV++ I + S DT NA F + + K IILV
Sbjct: 116 GGSAITN-LPEAEVMKNILNELGVDKSMIYTDVNSRDTLGNAFFVKKICEKNGFKRIILV 174
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILI 235
+SAYH+ RS + FQ G++ +D+ YS P + A++EY+G++
Sbjct: 175 TSAYHMPRSVIVFQKAGLDVIPYPTDFKMDKRYTVYSYFPKMNVLQDSTKAIREYVGLIA 234
Query: 236 AYY 238
Sbjct: 235 YQL 237
>gi|319783692|ref|YP_004143168.1| hypothetical protein Mesci_4004 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169580|gb|ADV13118.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 263
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 12/244 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L ++ L + + L+ + W + ++L L+ +QRP L
Sbjct: 18 LAIFLLLAGLLAVTIGRRRLAGAGSVLAFLILALSAWTSLGAMMLNPLEERFQRPPL--- 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LG G + E + S R+ ET L + + + G
Sbjct: 75 -PEKVDGIVVLGGGFEGAINLARGGYELN-SSGDRMVETAILARRFPTAKVVVSG--GTG 130
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G ++ L GV D + LE +S +T++NA F+ ++ G+ +LV+S
Sbjct: 131 ALFLDGEGDAATAPRLLTALGVAADRMILENKSRNTYENAVFTKELVTPKPGETWLLVTS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F G T DY + + + T +A++E+IG+
Sbjct: 191 AFHMPRAKALFDKAGFATVPWPVDYRTSGREGVGLFRDNPADSLQATTMAIREWIGLFAY 250
Query: 237 YYRG 240
+ G
Sbjct: 251 WLSG 254
>gi|110633719|ref|YP_673927.1| hypothetical protein Meso_1366 [Mesorhizobium sp. BNC1]
gi|110284703|gb|ABG62762.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 266
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 11/230 (4%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
I F L+ + GW +LL L+ + RP +PQ + I++LG G
Sbjct: 32 FRWRKLSITFGVFAFLVVALAGWTTFGAMLLHPLESRFARPDPAPQH---VDGIIVLGGG 88
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ E + S R E L + + + + G G ++
Sbjct: 89 FEGAVNLARGGYELN-DSGDRFVEAAILARRYPEARLIVSG--GSGSVFLPGEGDADTAP 145
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L GV + I+L+ +S DTF+NA+FS SM + + +LV+SA+H+ R+ F+
Sbjct: 146 RLLTALGVAPERIELDNRSRDTFENARFSMSMAEPGPDETWLLVTSAFHMPRAVGAFRQA 205
Query: 196 GINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYIGILIAYYRG 240
G +DY L+ + T + ++E++G+L G
Sbjct: 206 GFPILPWPADYKTTGREKPGLTDDNVLDSLRNTSIGIREWVGLLAYRMVG 255
>gi|257058358|ref|YP_003136246.1| hypothetical protein Cyan8802_0454 [Cyanothece sp. PCC 8802]
gi|256588524|gb|ACU99410.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8802]
Length = 265
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 22/240 (9%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ F ++ +++ + + L++ L+ P++ PQ +IV+LG
Sbjct: 32 FWKRPNWTPFPVAFALVILLISSNAWVSSALIQSLEQQISPPVIIPQ----AEVIVVLGG 87
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
T P P ++ + R+F +LY K + + + ES
Sbjct: 88 ATKS-PVKPRPMVDVNEHG-DRLFYAAKLYLDQKAPLIIASG--GRISWSGNSRPESEDM 143
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L GV I E SL+T++NA ++ N+ K ++LV+SA+HL R++L F+
Sbjct: 144 AQLLQMLGVPSQAIIQEPNSLNTYENAINVKQILDNLGIKKVLLVTSAFHLPRARLIFEK 203
Query: 195 FGINTKASCSDYLNA--------------YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
GIN + +DY ++P + LT LALKEYIG I +G
Sbjct: 204 LGINVIGAPTDYFVTEIDETNNQTSIEGFILGLLPDAHRLSLTTLALKEYIGTFIYRLKG 263
>gi|310643123|ref|YP_003947881.1| protein of hypothetical function duf218 [Paenibacillus polymyxa
SC2]
gi|309248073|gb|ADO57640.1| Protein of hypothetical function DUF218 [Paenibacillus polymyxa
SC2]
Length = 249
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 16/243 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + + L ++ + + LL + +L++ L+ Y +PL
Sbjct: 17 LFILVMAGLVIWLWKRARKPAIVLLLVTLLLYISSTNLAGDVLIRSLEKQYPQPLTV--- 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
GN+IV+LG G T + + +R+ RL+++ I+ SGG
Sbjct: 74 --QGNVIVVLGGGATEGTPDINGQGNLLGSAANRLLTAARLHEA-----TGLPILFSGGQ 126
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
E+ + +LL G+ DI +E +SL+T QNA ++S ++K Q ILV+SA
Sbjct: 127 VFGDSGNEANIAQRQLLGLGIPAKDIFIENRSLNTQQNAVYTSKILKQHQLTKPILVTSA 186
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGILIA 236
+H+ R+ L FQ G+ T A +DYL + + P + T ALKEY+GIL
Sbjct: 187 FHMPRAALEFQRAGMQTTAYPTDYLASEKLSLYAAKLSPSAGAISTTGTALKEYLGILAL 246
Query: 237 YYR 239
+
Sbjct: 247 KLK 249
>gi|206559863|ref|YP_002230627.1| hypothetical protein BCAL1497 [Burkholderia cenocepacia J2315]
gi|198035904|emb|CAR51796.1| putative exported protein [Burkholderia cenocepacia J2315]
Length = 238
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+L F+++ +LC+ R+ + L F + G + L+ + P+ P
Sbjct: 1 MILFDSFVLLFIGFMLCRKRRRTISIVAAAL-FWLLATGWLAAPLIAWSEAG-VTPVEHP 58
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+I++ ++P +RI + LY++C+Q + CT+++SG
Sbjct: 59 DMHGRTTLILIGAGTLRTDAG-----LQPPPDGAARIRKIAALYRTCRQQAERCTVVMSG 113
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ HG E+ VY +L+ GV D+ LE S T++NA+F++S++++ ILV+
Sbjct: 114 GDPQHHGDTEAAVYGRQLVAQGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARILVT 173
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y ++R+ L F+ FGI+ + ++ A +P N E AL E +GI +
Sbjct: 174 SSYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEHALHELVGIAQFHVYR 233
Query: 238 YRG 240
+ G
Sbjct: 234 WLG 236
>gi|325295248|ref|YP_004281762.1| hypothetical protein Dester_1066 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065696|gb|ADY73703.1| protein of unknown function DUF218 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 272
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ LI + L+ + I +S +L + + +L L+ ++ P +
Sbjct: 17 VFVVFILIGIVFLLINKRKIGIAILSLTAVLIYLLSIEPVKNRILLPLENAFPYPSEAEL 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D IV+LG G ++ Q R++ +++K K+ I++SGG
Sbjct: 77 ---DCKAIVVLGGGEIFHSPAEGMKAAVKPQVAKRLYTAFKIWKKVKK-----PIVVSGG 128
Query: 122 DPQKHGL-AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ AES L+ G+ +I E++S +TFQN F+ ++ K I LV+
Sbjct: 129 KVFNENVEAESSAMKRFLISLGIPNKEIIEESKSKNTFQNGIFTYKILNKKGIKKICLVT 188
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILI 235
SAYH+ RS F+ G + +DY ++ S P + Y + L + EY+GI
Sbjct: 189 SAYHMPRSYRIFKSIGFSVIPVPADYRVNRGSYSWSSYFPRMEDLYDSFLGIHEYVGIAY 248
Query: 236 AYYRGNR 242
R
Sbjct: 249 FELIQKR 255
>gi|221197747|ref|ZP_03570793.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221204695|ref|ZP_03577712.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221214890|ref|ZP_03587858.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221165117|gb|EED97595.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221175552|gb|EEE07982.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221181679|gb|EEE14080.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 238
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 130/243 (53%), Gaps = 10/243 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+L F+++ LLC+ R+ ++ + LF I G + + + + P+ P
Sbjct: 1 MILFDSFVLLFIGFLLCRKQRRRIALA-AVALFWLIASGWLAAPFVAWAEAGVE-PVEHP 58
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++++LG GT + P +RI + LY++C++ + CT+++SG
Sbjct: 59 DMHGQ-TVLIVLGAGTQRADDG----LRPPRDGAARIRKAAELYRTCRRQAERCTVVMSG 113
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ HG E+ VY L+ +G++ D+ LE +S T++NAQF++S++++ + IL++
Sbjct: 114 GDPQHHGDTEAAVYGRGLVAAGIDPGDLVLEPKSRTTYENAQFTTSILRSRRDDARILIT 173
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y ++R+ L F+ FGI+ + ++ A+ +P +N ELAL E IGI +
Sbjct: 174 SSYQMRRALLDFRRFGIDPQPVFANRREAHTGWLPRWSNVVAAELALHELIGIAQFHVYR 233
Query: 238 YRG 240
G
Sbjct: 234 LIG 236
>gi|13470862|ref|NP_102431.1| hypothetical protein mll0674 [Mesorhizobium loti MAFF303099]
gi|14021605|dbj|BAB48217.1| mll0674 [Mesorhizobium loti MAFF303099]
Length = 265
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 12/244 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L ++ L ++ + + L+ + W + ++L L+ + RP L
Sbjct: 18 LTIFLLLAGLIAGMIGRRRLAVTGSVLAFLILALSTWTSLGAMMLNPLEERFPRPPL--- 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LG G + E S S R+ ET L + + + G
Sbjct: 75 -PQKVDGIVVLGGGFEGAINLARGGYELS-SSGDRMVETAILARRFPLAKVVVSG--GHG 130
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + L+ GV D + LE +S +T++NA FS +++ G+ +LV+S
Sbjct: 131 AFFIDAEGDADSASRMLVPLGVSADRLVLEDKSRNTYENAIFSRKLVEPKPGETWLLVTS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F G T DY + + T +AL+E+IG+
Sbjct: 191 AFHMPRAKALFDKAGFPTVPWPVDYHTSGKEGVGLFRDNAIDSVQNTTIALREWIGLFAY 250
Query: 237 YYRG 240
+ G
Sbjct: 251 WLSG 254
>gi|241661663|ref|YP_002980023.1| hypothetical protein Rpic12D_0039 [Ralstonia pickettii 12D]
gi|240863690|gb|ACS61351.1| protein of unknown function DUF218 [Ralstonia pickettii 12D]
Length = 251
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 126/235 (53%), Gaps = 6/235 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + ++ + + +L IG G +P LL L+ ++
Sbjct: 5 ILCVLVIVATVCAARGRRRAARGLAVLCGVLVIAIGCGPMPAWLLDSLEKPFEN--EPHI 62
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
N IVLLG GT + +EP SY R+ ET +LY++C++ C I++SGG
Sbjct: 63 QWGTRNAIVLLGAGTFRV----GDSVEPGLFSYPRLVETTQLYQACRKSDGDCKILVSGG 118
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D + HG E+ VY +L+ GV +DD+ +E QS++T+QNAQFS +++ +LVSS
Sbjct: 119 DARHHGSPEATVYQRELVRLGVAKDDVLIEPQSMNTWQNAQFSRTVLAQYAPDRTVLVSS 178
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
A HL+RS LYF HFG+ +D L A S +P++ NF LT+ AL E+IGI
Sbjct: 179 AIHLRRSLLYFTHFGMAPIPVRADDLQAAASPLPMAYNFALTDFALHEWIGIARY 233
>gi|218245322|ref|YP_002370693.1| hypothetical protein PCC8801_0441 [Cyanothece sp. PCC 8801]
gi|218165800|gb|ACK64537.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8801]
Length = 265
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 22/240 (9%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ F ++ +++ + + L++ L+ P++ PQ +IV+LG
Sbjct: 32 FWKRPNWTPFPVAFALVILLISSNAWVSSALIQSLEQQISPPVIIPQ----AEVIVVLGG 87
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
T P P ++ + R+F +LY K + + + ES
Sbjct: 88 ATKS-PVKPRPMVDVNEHG-DRLFYAAKLYLDQKAPLIIASG--GRISWSGNSRPESEDM 143
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L GV I E SL+T++NA ++ N+ K ++LV+SA+HL R++L F+
Sbjct: 144 AQLLQMLGVPSQAIIQEPNSLNTYENAINVKQILDNLGIKKVLLVTSAFHLPRARLIFEK 203
Query: 195 FGINTKASCSDYLNA--------------YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
GIN + +DY ++P + LT LALKEYIG I +G
Sbjct: 204 LGINVIGTPTDYFVTEIDETNNQTSIEGFILGLLPDAHRLSLTTLALKEYIGTFIYRLKG 263
>gi|332711315|ref|ZP_08431247.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
gi|332349864|gb|EGJ29472.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
Length = 281
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 101/268 (37%), Gaps = 36/268 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L+V+ ++ +++ + L++ L++ Y +
Sbjct: 18 LACVLLVVALVMSWRNPRWVPIPVALALIVLLVSSNTWVTNSLIRSLEWQY----IPNSE 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-------- 114
+ + IV+LG T ++ R+ +LY+ K +
Sbjct: 74 LPEADAIVILGGATKPPFPPRPTPEV--DEAGDRVLYGAQLYREGKAPWVIPAGGRIVWG 131
Query: 115 --------TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
+ G + ES L + GV R I E++SL+T QNA
Sbjct: 132 SSSNNSSQRLSSESGQSSQRLAPESEDMAQILEDLGVPRAAIIQESRSLNTHQNAVNVRK 191
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI------------- 213
++ ++LV+SA H+ RS L F+ GI+ + +D+L + + +
Sbjct: 192 ILDQRDFPKVLLVTSAIHMPRSVLVFRRQGIDVIPAPTDFLVSQHELDEPSSSSQAALLH 251
Query: 214 -IPLSANFYLTELALKEYIGILIAYYRG 240
+P + A+KEYIGI+ RG
Sbjct: 252 SLPNAEQLSRITRAIKEYIGIVAYRIRG 279
>gi|33599364|ref|NP_886924.1| hypothetical protein BB0375 [Bordetella bronchiseptica RB50]
gi|33566960|emb|CAE30873.1| putative exported protein [Bordetella bronchiseptica RB50]
Length = 251
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 89/228 (39%), Positives = 125/228 (54%), Gaps = 6/228 (2%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ ++LF +G G I LL LQ YQ P N IV
Sbjct: 14 AGLAWRQWRRASRMLYGLSLVLFLALGCGPIAAWLLDGLQSDYQAK--PPIAWGQRNAIV 71
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
LLG GT A RIEP SY+RI E R Y C++ + C +I+SGGD HG AE
Sbjct: 72 LLGAGT----EQAAGRIEPGIFSYARIVEAARRYHDCRKAAAQCKLIVSGGDAAYHGDAE 127
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ VY + L+ GV+ D+ E S++T+QNAQF+S++++ ++LVSS HLKRS L
Sbjct: 128 ANVYRDPLVALGVDAADVLPEPGSMNTWQNAQFTSAVLRRYDADRVVLVSSGIHLKRSAL 187
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
YF HFG+ +DYL+A +S++PLS NF + + AL EY+GI+ +
Sbjct: 188 YFAHFGVAATPVRADYLHARWSVVPLSYNFAVADFALHEYLGIVRYHV 235
>gi|298492074|ref|YP_003722251.1| hypothetical protein Aazo_3520 ['Nostoc azollae' 0708]
gi|298233992|gb|ADI65128.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 263
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 22/252 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + LIV+ L + +S + L G + L++ L++ +
Sbjct: 18 LACVSLIVALVSLWKRPKIAAMAISLSLTLLLVCGNAWVAKNLVRSLEWQ----NIPLAE 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
IV+LG T + +S R+ +LY+ K + + D
Sbjct: 74 IPQAEAIVVLGGATKSG--VWPRPTVDLSESGDRVIYAAQLYRQKKAPIIVLSG--GRID 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ES L G+ + I E SL+T+QNA ++N K ++LV+SA
Sbjct: 130 WRGSASQESTDMAAILTSIGIPSEAIIQEPDSLNTYQNAVNVKETLENRGIKKVLLVTSA 189
Query: 183 YHLKRSQLYFQHFGINTKASCSDY--------------LNAYYSIIPLSANFYLTELALK 228
H R+ FQ GI+ + +D+ A +++P + N Y ALK
Sbjct: 190 MHTPRALKIFQRQGIDVIPAPTDFLVSQGELQELTSSPKGAILNLLPDTTNLYQFTNALK 249
Query: 229 EYIGILIAYYRG 240
EYIG +I RG
Sbjct: 250 EYIGSVIYSLRG 261
>gi|134278721|ref|ZP_01765435.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|134250505|gb|EBA50585.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
Length = 255
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 80/239 (33%), Positives = 126/239 (52%), Gaps = 6/239 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ + L+ + + F IG G++P LL+ LQ Y
Sbjct: 5 LLTVVALVAVLLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYA--ARPAI 62
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIIS 119
+ N IV+LG GT I +EP SYSR+ E LY+ C++ C I++S
Sbjct: 63 EWGERNAIVMLGLGTEKIA--ATGAVEPGTFSYSRVVEAASLYRDCRRARADADCKILVS 120
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + + ++LV
Sbjct: 121 GGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLV 180
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 181 TSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRL 239
>gi|53716341|ref|YP_106250.1| hypothetical protein BMAA1685 [Burkholderia mallei ATCC 23344]
gi|53722689|ref|YP_111674.1| hypothetical protein BPSS1669 [Burkholderia pseudomallei K96243]
gi|67640781|ref|ZP_00439576.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
gi|76818145|ref|YP_335892.1| hypothetical protein BURPS1710b_A0733 [Burkholderia pseudomallei
1710b]
gi|121597067|ref|YP_991282.1| hypothetical protein BMASAVP1_1688 [Burkholderia mallei SAVP1]
gi|124381902|ref|YP_001025692.1| hypothetical protein BMA10229_1895 [Burkholderia mallei NCTC 10229]
gi|126442720|ref|YP_001063394.1| hypothetical protein BURPS668_A2400 [Burkholderia pseudomallei 668]
gi|126446879|ref|YP_001077768.1| hypothetical protein BMA10247_A0567 [Burkholderia mallei NCTC
10247]
gi|126458095|ref|YP_001076296.1| hypothetical protein BURPS1106A_A2263 [Burkholderia pseudomallei
1106a]
gi|166999439|ref|ZP_02265278.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|167743403|ref|ZP_02416177.1| hypothetical protein Bpse14_35344 [Burkholderia pseudomallei 14]
gi|167820589|ref|ZP_02452269.1| hypothetical protein Bpse9_36024 [Burkholderia pseudomallei 91]
gi|167828952|ref|ZP_02460423.1| hypothetical protein Bpseu9_35016 [Burkholderia pseudomallei 9]
gi|167850424|ref|ZP_02475932.1| hypothetical protein BpseB_34607 [Burkholderia pseudomallei B7210]
gi|167908429|ref|ZP_02495634.1| hypothetical protein BpseN_39774 [Burkholderia pseudomallei NCTC
13177]
gi|167915704|ref|ZP_02502795.1| hypothetical protein Bpse112_34808 [Burkholderia pseudomallei 112]
gi|167923545|ref|ZP_02510636.1| hypothetical protein BpseBC_33634 [Burkholderia pseudomallei
BCC215]
gi|237508202|ref|ZP_04520917.1| putative membrane protein [Burkholderia pseudomallei MSHR346]
gi|254175884|ref|ZP_04882542.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254205102|ref|ZP_04911455.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|52213103|emb|CAH39142.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|52422311|gb|AAU45881.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|76582618|gb|ABA52092.1| Uncharacterized ACR, COG1434 family [Burkholderia pseudomallei
1710b]
gi|121224865|gb|ABM48396.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|126222211|gb|ABN85716.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
gi|126231863|gb|ABN95276.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|126239733|gb|ABO02845.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
gi|147754688|gb|EDK61752.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|160696926|gb|EDP86896.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|235000407|gb|EEP49831.1| putative membrane protein [Burkholderia pseudomallei MSHR346]
gi|238521564|gb|EEP85015.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
gi|243064501|gb|EES46687.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|261826553|gb|ABM99690.2| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
Length = 255
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 80/239 (33%), Positives = 127/239 (53%), Gaps = 6/239 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ + L+ + + + F IG G++P LL+ LQ Y
Sbjct: 5 LLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYA--ARPAI 62
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIIS 119
+ N IV+LG GT I +EP SYSR+ E LY+ C++ C I++S
Sbjct: 63 EWGERNAIVMLGLGTEKIA--ATGAVEPGTFSYSRVVEAASLYRDCRRARADADCKILVS 120
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + + ++LV
Sbjct: 121 GGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLV 180
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 181 TSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRL 239
>gi|45656706|ref|YP_000792.1| hypothetical protein LIC10815 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|294828296|ref|NP_713526.2| hypothetical protein LA_3345 [Leptospira interrogans serovar Lai
str. 56601]
gi|45599942|gb|AAS69429.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|293386147|gb|AAN50544.2| conserved hypothetical protein [Leptospira interrogans serovar Lai
str. 56601]
Length = 258
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ F + +L + + L++ L+ Y P +S + ++I++LG +
Sbjct: 36 KKWKEKFSVWLPVLFLWILSTSTVSQKLIQSLEMYY--PPVSLEQLPKADVILVLGGMVS 93
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ F S R+ ET+RLY++ K + + G+ + ES
Sbjct: 94 TLSIHDEPVD--LFNSAERLTETVRLYRAKKAPKILFSG--GSGNLFYQTVPESEPAGRF 149
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L + G+ + LE++S +T +N F+ ++K ++ILV+S++H+KRS FQ GI
Sbjct: 150 LKQMGIPDSSLILESKSRNTAENKSFAVGLLKEHGWNSVILVTSSFHMKRSVEIFQENGI 209
Query: 198 NTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+D+ + + P + + +++KE+IGIL+ R
Sbjct: 210 TIIPFPTDFRSQKSVLTLDNFFPSTGCLENSTISIKEWIGILVHKIR 256
>gi|183220138|ref|YP_001838134.1| hypothetical protein LEPBI_I0726 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910258|ref|YP_001961813.1| hypothetical protein LBF_0703 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774934|gb|ABZ93235.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778560|gb|ABZ96858.1| Conserved hypothetical protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 258
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 12/228 (5%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+S + F L I L+ L+ Y P +S Q ++ ++LG
Sbjct: 32 RIKSGKTKFLFFIICLFLYLASSSFIANRLVTELEKEY--PPVSLQDAPKVDVAIVLGGM 89
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
I ++ A S RI + +RLYK+ K + T G E+ +
Sbjct: 90 IQTISSVKARPE--LTDSADRITDAIRLYKAGKVKKILFTG--GSGLLLSDTYREADLAK 145
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ GV+ +DI LE S +T +NA + ++ ++ +L++SA+H+KRS FQ
Sbjct: 146 SLFIDLGVKEEDIILENNSRNTHENAVETKKILMEKNFQSFLLITSAFHMKRSLGCFQKQ 205
Query: 196 GINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAY 237
+N +DY + A+ +P + LT L++KE++G +
Sbjct: 206 NLNVFPFPTDYRSFNTDSGAFELYLPSAGYLDLTTLSIKEWVGYFVYR 253
>gi|75675900|ref|YP_318321.1| hypothetical protein Nwi_1708 [Nitrobacter winogradskyi Nb-255]
gi|74420770|gb|ABA04969.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 280
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 11/243 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ I + L + + + G+ + +LL L +
Sbjct: 34 IALICGLGLCLSLSRWRRAGVGLLMAGIAALLIFGYSPLGNVLLLTLSERFPAWQH---D 90
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+D + I++LG ++ +E + S R+ + L + + + + G+
Sbjct: 91 GRDPDGIIVLGGAVDADISVSRGAVE-TNASAERVIAALELARRFPKARIVYSG--GAGN 147
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
AE+ V + G+ R+ I LET+S T +NA+F+ ++K G+ +LV+SA
Sbjct: 148 LIAGLRAEAPVMGRLFEQFGIPRERIVLETRSRTTDENARFTRELVKPESGERWLLVTSA 207
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY--SIIP---LSANFYLTELALKEYIGILIAY 237
YH+ RS F+ G + + D+ + + +P LSA + A E++G+L+
Sbjct: 208 YHMPRSVGVFRKAGFDVEPYPVDWRTRGWIDAWMPFDKLSAGLARADTAAHEWVGLLVYR 267
Query: 238 YRG 240
G
Sbjct: 268 MTG 270
>gi|227111948|ref|ZP_03825604.1| hypothetical protein PcarbP_03233 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 282
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 87/233 (37%), Gaps = 15/233 (6%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + L+ + + LL L+ Y +PQ IV+LG
Sbjct: 31 WFTQRQRTGKAIILASWLMLILLSLQPVADRLLLPLESHYPTWRQTPQ-ASKAEYIVVLG 89
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G T A S R+ E +RLY + +I +GG Q + ++ +
Sbjct: 90 GGYTYNAE-WAPSSNLISNSLPRVTEGVRLYHANP----GAKLIFTGGAAQGNPVSSAKT 144
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
G+ + DI + DT + A ++ ++ LV+SA HL R+ +FQ
Sbjct: 145 AALVAESLGIPQQDIIILDTPRDTEEEAAATAKIVGERPFL---LVTSANHLPRAMRFFQ 201
Query: 194 HFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ + ++ LN + + P + +E A E +G L +G
Sbjct: 202 AQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQALKG 254
>gi|167566356|ref|ZP_02359272.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis EO147]
Length = 255
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 78/223 (34%), Positives = 121/223 (54%), Gaps = 6/223 (2%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + +LF IG G +P LL+HLQ Y + N IV+LG GT
Sbjct: 21 RRRTSRASFAASAVLFFAIGCGPVPAWLLRHLQAPYA--ARPAIEWGERNAIVMLGLGTE 78
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYN 135
I +EP SYSR+ E LY C++ + C I++SGGD +++G+ E+ VY
Sbjct: 79 KIA--ATGAVEPGTFSYSRVVEAASLYHGCRKARANAGCKIVVSGGDARRNGVPEATVYR 136
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ L+ G++ D+ E +S++T+QNAQF+ ++ + ++LV+S HL+RS LYF HF
Sbjct: 137 DALIGLGIDAADVLSEPRSMNTWQNAQFTRVVLAGYRADRVLLVTSGVHLRRSMLYFAHF 196
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G+ ++YL A +PL+ NF +LAL EY+GI
Sbjct: 197 GVAAIPVRAEYLQAMLFPLPLAYNFSAADLALHEYLGIARYRL 239
>gi|254423832|ref|ZP_05037550.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191321|gb|EDX86285.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 263
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 92/241 (38%), Gaps = 21/241 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L R ++ + + F I+ LL L++ Y P + IV+LG
Sbjct: 28 WLWRHPRRASGAIALALFILFFSSNPIVSNKLLSSLEWRY----FPPDPVPTADAIVVLG 83
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
T P +E S ++ RI RLY + + + +E+
Sbjct: 84 GATVP-AIAPRPWVEVS-EAGDRILYAARLYNQGRAPKLILSGGRVQWRG-GSDESEADD 140
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ V DI LE SL+T QNA ++ +++LV+SA H+ RS FQ
Sbjct: 141 MKAFAMAMNVPEADIILEETSLNTRQNAVNVKKILAAQSIDSVLLVTSAVHMPRSVAIFQ 200
Query: 194 HFGINTKASCSDYLNA--------------YYSIIPLSANFYLTELALKEYIGILIAYYR 239
I+ + +DYL S++P + A+KEY+G +I R
Sbjct: 201 KLDIDVIPAPTDYLVTTPSDESGEITIEGRILSLLPRAEATGRFTRAMKEYVGFVIYRLR 260
Query: 240 G 240
G
Sbjct: 261 G 261
>gi|167573468|ref|ZP_02366342.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis C6786]
Length = 255
Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 77/223 (34%), Positives = 120/223 (53%), Gaps = 6/223 (2%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + +LF IG G +P LL+HLQ Y + N IV+LG GT
Sbjct: 21 RRRTSRASFAASAVLFFAIGCGPVPAWLLRHLQAPYA--ARPAIEWGERNAIVMLGLGTE 78
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYN 135
+EP SYSR+ E LY C++ + C I++SGGD +++G+ E+ VY
Sbjct: 79 --KIAATGAVEPGTFSYSRVVEAASLYHGCRKARANAGCKIVVSGGDARRNGVPEATVYR 136
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ L+ G++ D+ E +S++T+QNAQF+ ++ + ++LV+S HL+RS LYF HF
Sbjct: 137 DALIGLGIDAADVLSEPRSMNTWQNAQFTRVVLAGYRADRVLLVTSGVHLRRSVLYFAHF 196
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G+ ++YL A +PL+ NF +LAL EY+GI
Sbjct: 197 GVAAIPVRAEYLQAMLFPLPLAYNFSAADLALHEYLGIARYRL 239
>gi|253688162|ref|YP_003017352.1| hypothetical protein PC1_1775 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754740|gb|ACT12816.1| protein of unknown function DUF218 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 282
Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 88/233 (37%), Gaps = 15/233 (6%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + L + + LL L+ Y +PQ + IV+LG
Sbjct: 31 WFTQRQRTGRTIILASWLALILLSLQPVADRLLLPLESHYPTWRQAPQAN-KVDYIVVLG 89
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G T A S R+ E +RLY + +I +GG Q + ++ +
Sbjct: 90 GGYTYNAE-WAPSSNLISNSLPRVTEGIRLYHANP----GAKLIFTGGAAQGNPVSSAKT 144
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
G+ + DI + DT + A ++ ++ + LV+SA HL R+ +FQ
Sbjct: 145 AALVAESLGIPQQDIVILDTPRDTEEEAAATAKIVGDRPFL---LVTSANHLPRAIRFFQ 201
Query: 194 HFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ + ++ LN + + P + +E A E +G L +G
Sbjct: 202 AQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQALKG 254
>gi|227329837|ref|ZP_03833861.1| hypothetical protein PcarcW_21865 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 282
Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 16/234 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K ++ L+ + + LL L+ Y +PQ IV+L
Sbjct: 31 WFTQRQRTGKTIMLAS-WLMLILLSLQPVADRLLLPLESHYPTWRQTPQ-ASKAEYIVVL 88
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T A S R+ E +RLY + +I +GG Q + ++ +
Sbjct: 89 GGGYTYNAE-WAPSSNLISNSLPRVTEGVRLYHANP----GAKLIFTGGAAQGNPVSSAK 143
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
G+ + DI + DT + A ++ ++ LV+SA HL R+ +F
Sbjct: 144 TAALVAESLGIPQQDIVILDTPRDTEEEAAATAKIVGERPFL---LVTSANHLPRAMRFF 200
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Q G+ + ++ LN + + P + +E A E +G L +G
Sbjct: 201 QAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQALKG 254
>gi|261821327|ref|YP_003259433.1| hypothetical protein Pecwa_2047 [Pectobacterium wasabiae WPP163]
gi|261605340|gb|ACX87826.1| protein of unknown function DUF218 [Pectobacterium wasabiae WPP163]
Length = 282
Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 88/233 (37%), Gaps = 15/233 (6%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + L+ + + LL L+ Y +PQ + IV+LG
Sbjct: 31 WFTQRQRTGKTMILASWLMLILLSLQPVADRLLLPLESQYPTWRQTPQ-ADNAEYIVVLG 89
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G T A S R+ E +RLY + +I +GG Q + ++ +
Sbjct: 90 GGYTYNAE-WAPSSNLISNSLPRVTEGVRLYHANP----GAKLIFTGGAAQGNPVSSAKT 144
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
G+ + DI + DT + A ++ ++ LV+SA HL R+ +FQ
Sbjct: 145 AALVAESLGIPQQDIVILDTPRDTEEEAAATAKIVGARPFL---LVTSANHLPRAIRFFQ 201
Query: 194 HFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ + ++ LN + + P + +E A E +G L +G
Sbjct: 202 AQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQSLKG 254
>gi|299135177|ref|ZP_07028368.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298590154|gb|EFI50358.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 264
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 11/244 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L++ + LI L + + +LL G+ + +LL L + S +
Sbjct: 18 LIATVCLIGVMLSLTRWRKAGVRIGAAGILLLLVCGYSPLGNVLLLTLSERFPAWQESGR 77
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ I++LG T E + S R+ L + + +
Sbjct: 78 AP---DGIIVLGGAINPDLTAVRGAPEMN-SSAERMTAAAVLARRFPNAKIVLSG--GNA 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+P E+ V L + GV D I +E +S T++NA+F+ +I + G+ ++LV+S
Sbjct: 132 NPFHPLSTEAEVGRKFLEDLGVADDRIVMEGRSRTTYENAEFTRPLIHPVAGERLLLVTS 191
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIA 236
AYH+ R+ F+ G N +A D+ + + LS + A+ E++G++
Sbjct: 192 AYHMPRAMGVFRAAGFNVEAYPVDWRTRGWVDAERPFLTLSGGLGRLDTAVHEWVGLIGY 251
Query: 237 YYRG 240
G
Sbjct: 252 RLAG 255
>gi|167899018|ref|ZP_02486419.1| hypothetical protein Bpse7_35118 [Burkholderia pseudomallei 7894]
Length = 255
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 80/239 (33%), Positives = 127/239 (53%), Gaps = 6/239 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ + L+ + + + F IG G++P LL+ LQ Y
Sbjct: 5 LLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYA--ARPAI 62
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIIS 119
+ N IV+LG GT I +EP SYSR+ E LY+ C++ C I++S
Sbjct: 63 EWGERNAIVMLGLGTEKIA--ATGAVEPGTFSYSRVVEAASLYRDCRRARADADCKILVS 120
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + + ++LV
Sbjct: 121 GGDARRNGVPEASVYRDALVGVGIDSADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLV 180
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 181 TSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYQL 239
>gi|50121475|ref|YP_050642.1| hypothetical protein ECA2551 [Pectobacterium atrosepticum SCRI1043]
gi|49612001|emb|CAG75450.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 282
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 48/233 (20%), Positives = 88/233 (37%), Gaps = 15/233 (6%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + L+ + + LL L+ Y + + IV+LG
Sbjct: 31 WFTRRQRTGKTMVLGSWLMLILLSLQPVADRLLLPLESQYPTWQQT-SQASKADYIVVLG 89
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G T A S R+ E +RLY + +I +GG Q + ++ +
Sbjct: 90 GGYTYNAE-WAPSSNLISNSLPRVTEGIRLYHANP----GAKLIFTGGAAQGNPVSSAKT 144
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
G+ R DI + DT + A ++ ++ + +LV+SA HL R+ +FQ
Sbjct: 145 AALVAESLGIPRQDIVILDTPRDTEEEAAATAKIVG---DRPFLLVTSANHLPRAIRFFQ 201
Query: 194 HFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ + ++ LN + + P + +E A E +G L +G
Sbjct: 202 AQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQLLKG 254
>gi|170696469|ref|ZP_02887595.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
gi|170138622|gb|EDT06824.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
Length = 239
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 118/238 (49%), Gaps = 7/238 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + L + + ++ R + F + + GW P + L Q +P
Sbjct: 2 ILFTLLALFFAAIAIWKRARRPLLFCTIAIFWLLSAGWLTAPLLSLA----QPQAQTSTP 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IVLLG GT + P + +RI + + Y +CK+ + C++I+SG
Sbjct: 58 ARFAPRTAIVLLGGGTVYNRDK---VLVPPREVLARIAVSAKNYAACKRSATVCSVIVSG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE QSL T++NA+ S+++ + ++ILV+
Sbjct: 115 GNPQRHAATEADTYLPYLLREQVPRSDIVLENQSLTTYENARNVSAIVGQSRYDSLILVT 174
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SAYH+ R+ L F+HFG+ + S A ++P +N E+AL E IGI +
Sbjct: 175 SAYHMPRAMLDFRHFGLEPQPLISSARRARLGVLPRYSNLANAEIALHELIGIAQYHV 232
>gi|110633611|ref|YP_673819.1| hypothetical protein Meso_1258 [Mesorhizobium sp. BNC1]
gi|110284595|gb|ABG62654.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 268
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ ++ L+ L + + F+ +L + IGW + + L L+ + RP +S
Sbjct: 21 LVGFVALLGLVLLLFRRKVAGTLFVGTAAILLAVIGWSPLGSAALLALENRFPRPAIS-- 78
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
IV+LG + I + R+ +T + + + I+
Sbjct: 79 --GPIAGIVVLGGEIDTDVSAERKTIAL-TDAAERLTKTAEFNRLYPNARILLSGGIND- 134
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
H E+ + L++ GV D I+LE +S +T +NA S ++ G+ +LV+S
Sbjct: 135 LLITHDRTEAALARELLVKIGVPADRIELEERSRNTCENAIESKAVAAPKPGETWLLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDY---LNAYYSIIPL-SANFYLTELALKEYIGILIAY 237
A+H+ R+ F+ G DY +A S+ P +A YLT++A E++G+ Y
Sbjct: 195 AFHMPRAVGCFRAAGFPVLPYPVDYLARRSALSSLAPSVAAGLYLTDIAAHEWLGLAAYY 254
Query: 238 Y 238
+
Sbjct: 255 F 255
>gi|158335605|ref|YP_001516777.1| hypothetical protein AM1_2455 [Acaryochloris marina MBIC11017]
gi|158305846|gb|ABW27463.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 261
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 20/250 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
LS + L+V+ + + + + F G + LL L+ Y +
Sbjct: 18 LSTVLLLVAIATFWKRPKVAAISVGLALGILFFSANGWVGDGLLYSLEHQYPP----LKQ 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G T P +E S ++ R+ +LY+ K +
Sbjct: 74 DATADAIVVLG-GCTRSAHPPRPWVEVS-EAGDRVLYAAKLYREGKAPKVVLAG--GRIY 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVSS 181
+ G AE++ L GV + LE SL+TF+NA + +N ++LV+S
Sbjct: 130 WKGGGQAEALDMAELLKIMGVPESALLLEPDSLNTFENATNVKRVLKQNNIDGPLLLVTS 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----------YYSIIPLSANFYLTELALKEY 230
A+H+ RS F+ G++ A+ +DY ++P T +A KE+
Sbjct: 190 AFHMPRSMAIFETQGLSVIAAPTDYQVTEVNENAGFLGFVLRLLPDIEALVNTTIAFKEW 249
Query: 231 IGILIAYYRG 240
IG L+ RG
Sbjct: 250 IGFLMYRLRG 259
>gi|254282506|ref|ZP_04957474.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
gi|219678709|gb|EED35058.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
Length = 253
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 82/227 (36%), Gaps = 14/227 (6%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ L F L++ L+ Y P +P+ +IV+LG
Sbjct: 34 RGGAFLWSFLAFALVYFCSTEFGANTLMEPLEARY--PAFAPEELPKAEVIVVLGGAIDG 91
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ R+ LY M + G E+ + KL
Sbjct: 92 ESRFGRGGDA--THAADRLLTAAELYARKMAPYMLLSGGAPSGQR-----PEADLMAEKL 144
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
GV R + LE S TF NA S+ M+ ++I+LV+S H++R+ F+ FG+
Sbjct: 145 EFMGVPRSAMLLEPASRTTFDNAVNSADMLNARNYRHILLVTSGAHMRRAVALFEAFGLQ 204
Query: 199 TKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAYYRG 240
A +D+ Y +P + + A+ E++G + G
Sbjct: 205 VTAVATDHQIPRYAPTVPGWLPTADRLARSTRAVHEWVGYWVYDLTG 251
>gi|154248380|ref|YP_001419338.1| hypothetical protein Xaut_4460 [Xanthobacter autotrophicus Py2]
gi|154162465|gb|ABS69681.1| protein of unknown function DUF218 [Xanthobacter autotrophicus Py2]
Length = 267
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 91/244 (37%), Gaps = 10/244 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL + ++ + + + + G+ + +L L+ + +
Sbjct: 20 LLVSLAVVGLVLLGFRRRRLGTGLILTAVAGWLVFGFSPVALYMLSPLEERFPQFK---D 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
I++LG ++ R L + Q + SG
Sbjct: 77 DGTPVTGIIMLGGSEKPEIGNVRGLPSFG-EAGERPIAFAALSRRYPQAR-LAFVGGSGL 134
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
E+ + L + G+ ++ E +S +T +NA+F+ +++K G+ +LV+S
Sbjct: 135 LFPNGDAVEAQMIRMSLPDLGIPEARVEFEGKSRNTAENAEFAKALLKPKPGERWLLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-----SANFYLTELALKEYIGILIA 236
A+H+ R+ F+ G + D+ A + + T++A +E+IG++
Sbjct: 195 AWHMPRAVGCFRKVGFDVVPYPVDFQTAAPDRLDQPFSRAADGLDKTDVATREWIGLVAY 254
Query: 237 YYRG 240
Y G
Sbjct: 255 YLSG 258
>gi|167587349|ref|ZP_02379737.1| hypothetical protein BuboB_18529 [Burkholderia ubonensis Bu]
Length = 224
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 72/219 (32%), Positives = 117/219 (53%), Gaps = 7/219 (3%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+LC+ R+ F L F + G + L+ Q P+ P +++LLG
Sbjct: 1 MLCRKWRRTIAAVAFAL-FWLLATGWLAAPLIAWSQAG-VTPVEHPDMHGQ-TVLILLGT 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT I R+EP + RI +T LY+ C+Q + CT+I+SGGDP++HG E+ Y
Sbjct: 58 GTRRID----GRLEPRTDGFPRIRKTAALYRDCRQRAERCTVIVSGGDPERHGATEAATY 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ GV+ D+ LE S T++NA+F++ ++++ ILV+S+Y ++R+ L F+H
Sbjct: 114 APYLVARGVDPRDLMLEANSRTTYENAKFTTPILRSRHVDATILVTSSYQMRRALLDFRH 173
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FGI+ + ++ +A +P N E AL E IGI
Sbjct: 174 FGIDAQPVYANRRDAQTGWLPRRQNLINAEHALHELIGI 212
>gi|160872133|ref|ZP_02062265.1| transmembrane [Rickettsiella grylli]
gi|159120932|gb|EDP46270.1| transmembrane [Rickettsiella grylli]
Length = 282
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 89/226 (39%), Positives = 130/226 (57%), Gaps = 4/226 (1%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
L + S +L + FIG G+IP LL +LQ +Y L +P K N I+LL
Sbjct: 47 ACLFNLKKTSLMIGSIVILSYFFIGNGVIPAYLLHNLQSAYN--LSTPIHWKQKNTIILL 104
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G GT+ P + +I PS ++SRI +T+ LY CK+ + CTI+ISGGDP +G E+
Sbjct: 105 GAGTSKDP--KSNKIRPSLFAFSRIIQTVLLYHKCKKANTICTILISGGDPLNNGNTEAT 162
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+Y LL G+ DI+LETQS +T+QNA+FSS ++K ++LV+SA+ LKRS LYF
Sbjct: 163 IYQEALLSLGINAKDIQLETQSNNTYQNAKFSSFLLKKQDSSQLLLVNSAFTLKRSLLYF 222
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
F I SD++ ++ P+ NF + + + EY+GI Y
Sbjct: 223 SFFNIYPTPIASDFITIPFTRYPIGYNFAMNDFVIHEYVGIFRFYL 268
>gi|254481130|ref|ZP_05094376.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214038925|gb|EEB79586.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 245
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 14/230 (6%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ ++ ++ L+ L+ ++ +S + IV+LG
Sbjct: 23 WRWRRASASLLGVSIVWLYACSTALVADFLMASLEDDFRPKAMSV--VPKVDAIVVLGGA 80
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T ++ + R+ + LYK+ K +++ G E+
Sbjct: 81 TRGDTYWSSMAD--LNAAADRLTHAVSLYKAKKA-----PLVLLSGGSTTGSRPEAEQLR 133
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ G+ + +E QSLDT QNA++S+ +++ + I+LV+SAYH+ R+ F+
Sbjct: 134 DYMVLMGLPDRALLMERQSLDTQQNARYSALILQGRDVRRILLVTSAYHMSRAVPLFERQ 193
Query: 196 GINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G + +DY A +P + + + + A+KEY+G L +G
Sbjct: 194 GFEVIPAPTDYQRLVGKPAVPRWLPTADDLWRSTAAIKEYVGFLYYRAQG 243
>gi|308070011|ref|YP_003871616.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305859290|gb|ADM71078.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 249
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 16/243 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + + L ++ + LL + +L+ L+ Y +P
Sbjct: 17 LFILVMTGLVIWLWKRARIPAVVLLLVTLLLYVSSTNLAGDLLISSLEKQYPQPRTV--- 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
G++IV+LG G T + + +R+ RL+++ I+ SGG
Sbjct: 74 --QGDVIVVLGGGATQGTPDINGQGNLLGSAANRLLTAARLHEA-----TGLPILFSGGQ 126
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
E+ + +LL G+ DI +E +SL+T QNA ++S +++ Q +LV+SA
Sbjct: 127 VFGDSGNEANIAQRQLLGLGIPAKDILIENRSLNTQQNAVYTSQILEKHQLTRPVLVTSA 186
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGILIA 236
+H+ R+ L FQ G+ A +DYL + + P + T ALKEY+GIL
Sbjct: 187 FHMPRAALEFQRAGVQAIAYPTDYLASEKLSLYAGKLSPSAGAMSTTGTALKEYLGILAL 246
Query: 237 YYR 239
+
Sbjct: 247 KLK 249
>gi|116329099|ref|YP_798819.1| hypothetical protein LBL_2520 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330291|ref|YP_800009.1| hypothetical protein LBJ_0560 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116121843|gb|ABJ79886.1| conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123980|gb|ABJ75251.1| conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 273
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 11/227 (4%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ F + +L+ + I L++ L+ Y P L + ++I++LG +
Sbjct: 34 KKWKEKFSVWAPVLILWLLSTSNISQKLIQSLEIYY--PPLPLEQVPRADVILVLGGMVS 91
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ S R+ ET+RLY++ K + + G+ + ES
Sbjct: 92 TLSIHNKPVD--LSNSAERLTETVRLYRAKKAPKILFSG--GSGNLLYQTVPESEPAGRF 147
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L + G+ + LE++S +T +N F+ ++K ++ILV+S++H+KRS FQ GI
Sbjct: 148 LKQMGIPDSSLILESKSRNTVENKNFAVELLKKHGWSSVILVTSSFHMKRSVEIFQEKGI 207
Query: 198 NTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+D+ + P + + +++KE+IGIL+ R
Sbjct: 208 TIIPFPTDFRTQKSVLTLDNFFPSTGCLENSTISIKEWIGILVHKIR 254
>gi|78066102|ref|YP_368871.1| hypothetical protein Bcep18194_A4631 [Burkholderia sp. 383]
gi|77966847|gb|ABB08227.1| protein of unknown function DUF218 [Burkholderia sp. 383]
Length = 224
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 67/229 (29%), Positives = 118/229 (51%), Gaps = 10/229 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+LC+ R+I + LF + G + L+ + P+ P+ +I L+G
Sbjct: 1 MLCRKRRRII-SIAAIALFWLLATGWLAAPLIAWTESG-VAPVEHPEMHGRTTLI-LIGA 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT ++P +RI + LY++C+Q + CT+++SGGDPQ HG E+ VY
Sbjct: 58 GTKRTDFG----LQPPPDGTARIHKVAALYRTCRQLAERCTVVMSGGDPQHHGETEAAVY 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+L+ G+ D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+
Sbjct: 114 GRQLVAEGIAPTDLVLEPDSRTTYENAKFTASILRSQYDDARILVTSSYQMRRALLDFRR 173
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
FGI+ + ++ A +P N E AL E +GI + + G
Sbjct: 174 FGIDPQPVYANRRRAQTGWLPRWRNLTNAEQALHELVGIAQFHVYRWLG 222
>gi|304309671|ref|YP_003809269.1| hypothetical protein HDN1F_00190 [gamma proteobacterium HdN1]
gi|301795404|emb|CBL43602.1| conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 256
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 108/244 (44%), Gaps = 14/244 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++++ + +V + + + +++ F ++ L K L+ Y P+L P
Sbjct: 17 VIVALVLALVLFCW--GRVRGAALSVFLGLVVLVFASMPLVAVGLWKSLEGRY--PILVP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++IV+LG G P + + R++ LY + K + +
Sbjct: 73 SEQPKADVIVVLGGGI--ALPEPPQVVPDLNDAADRVWYAAELYHAGKAPWVVVSG--GQ 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
P+ +E+ + L GV + I +E+ S DT NA ++++++ + + +LV+
Sbjct: 129 VFPRSGLESEAEYHRKLLERMGVPAEAILVESASRDTAGNAMLTAALMRERKFQKALLVT 188
Query: 181 SAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ L F+H G++ + D + ++P++ F TE AL E++ +
Sbjct: 189 SAAHMPRAVLLFEHAGVDVVPASCDVHGVDMDVPLILKLLPVAWAFQDTERALHEWLAFV 248
Query: 235 IAYY 238
Y
Sbjct: 249 YYRY 252
>gi|288817420|ref|YP_003431767.1| hypothetical protein HTH_0099 [Hydrogenobacter thermophilus TK-6]
gi|288786819|dbj|BAI68566.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
gi|308751027|gb|ADO44510.1| protein of unknown function DUF218 [Hydrogenobacter thermophilus
TK-6]
Length = 240
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 24/238 (10%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
++ ++ + + LL + + LL L+ Y P K
Sbjct: 18 FVLALLLISFFERKKRLTYYTSVSLALLIYMLSIEPVKDTLLTPLESKYSVPE-----KF 72
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+LG G+ S R+ + L+ I++SGG
Sbjct: 73 QADAIVVLGGGSYS-------TGILKEDSMKRLLTALILH-----KRTGLPIVLSGGA-- 118
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
L ++ + + L+E GV++ DI E +S DT +NA + + + K+++LV+SAYH
Sbjct: 119 -ENLPDAEIMKSLLVELGVDKRDIITEVRSRDTEENASYVREICQQRNYKSVVLVTSAYH 177
Query: 185 LKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
L R+ F+ G++ +D+ YS++P + + AL+EY+ +L
Sbjct: 178 LPRAVFLFKKEGLSVIPYPTDFKRDLRYNLYSLLPKMSVLNDSVKALREYVALLSLRL 235
>gi|323525715|ref|YP_004227868.1| hypothetical protein BC1001_1372 [Burkholderia sp. CCGE1001]
gi|323382717|gb|ADX54808.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 239
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 7/238 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + L + + ++ R + F + + GW P + L Q +P
Sbjct: 2 ILFTLLALFFAAILIWKRARRPLVFCTVALFWLLSTGWLTAPLLSLA----QPQAETSAP 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I+LLG GT + P + +RI + Y +CK+ + C++I+SG
Sbjct: 58 TRFAPRTAIILLGGGTVYNRDK---VLVPPREVMARIAVSAENYAACKRSATVCSVIVSG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE +SL T++NA+ S+++ + ++ILV+
Sbjct: 115 GNPQRHPATEADTYLPYLLREQVPRSDIVLENRSLTTYENARNVSAIVGQSRYDSLILVT 174
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SAYH+ R+ L F+HFG+ + S A+ ++P +N ELAL E +GI +
Sbjct: 175 SAYHMPRALLDFRHFGLEPQPLISGARRAHLGLLPRYSNLANAELALHELVGIAQYHV 232
>gi|307150072|ref|YP_003885456.1| hypothetical protein Cyan7822_0130 [Cyanothece sp. PCC 7822]
gi|306980300|gb|ADN12181.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 278
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 106/266 (39%), Gaps = 35/266 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L++S + F ++ +++ G + L++ L++ PQ
Sbjct: 18 LTCVLLVISLILWWKRPAWVPFPITLALIIILVAGNEWVSNGLIQSLEWQ-----NIPQN 72
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ I++LG T + P ++ + + R+ +LY+ K + +
Sbjct: 73 IPNAEAIIVLGGATKS-ASFPRPMVDLN-EQGDRVVYAAKLYQDHKAPLIIASGGRIKWG 130
Query: 122 -------------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ ES L GV I ++ SL+T++N ++
Sbjct: 131 GQQVTDKLSGVGNSFRTQQQPESADIATLLTLMGVPPSAILQDSTSLNTYENVVNVKKIL 190
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY--------------YSII 214
K ++LV+SA H+ RS L F+ GI+ + +D+L + ++I
Sbjct: 191 NEKGIKRVLLVTSALHMPRSLLIFKKQGIDVIPAPTDFLVSQPELEQSDLSVETIMLNLI 250
Query: 215 PLSANFYLTELALKEYIGILIAYYRG 240
P + T ALKEYIG++I +G
Sbjct: 251 PDAGRLEGTTKALKEYIGMVIYRLKG 276
>gi|218437457|ref|YP_002375786.1| hypothetical protein PCC7424_0452 [Cyanothece sp. PCC 7424]
gi|218170185|gb|ACK68918.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 260
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 23/248 (9%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
LS + L+ + + F ++ +++ G I L++ L++ P
Sbjct: 18 LSCVLLVTTLILWWKRPAWIPFPVTLALIILLVASNGWISNQLVQSLEWQ-----NIPSE 72
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
IVLLG T P + + R+ +LY K + + D
Sbjct: 73 IPQAEAIVLLGGATK--PPAYPRPMVDMSEQGDRVLYAAKLYLDQKAPLIIASG--GRID 128
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +ES N L GV I E SL+T++NA +++ K ++LV+SA
Sbjct: 129 WLSNEQSESADMANLLQLMGVPPQVIIQEPDSLNTYENATNVKKILQEKGIKQVLLVTSA 188
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAY--------------YSIIPLSANFYLTELALK 228
H+ RS F+ GI+ A+ +D+L + +I+P S N T ALK
Sbjct: 189 LHMPRSLFIFKKLGIDVIAAPTDFLVSRTELEPNNLTLEGIILNILPSSENLDRTTKALK 248
Query: 229 EYIGILIA 236
EYIG+L+
Sbjct: 249 EYIGLLVY 256
>gi|107022563|ref|YP_620890.1| hypothetical protein Bcen_1009 [Burkholderia cenocepacia AU 1054]
gi|116689512|ref|YP_835135.1| hypothetical protein Bcen2424_1490 [Burkholderia cenocepacia
HI2424]
gi|105892752|gb|ABF75917.1| protein of unknown function DUF218 [Burkholderia cenocepacia AU
1054]
gi|116647601|gb|ABK08242.1| protein of unknown function DUF218 [Burkholderia cenocepacia
HI2424]
Length = 224
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 67/229 (29%), Positives = 117/229 (51%), Gaps = 10/229 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+LC+ R+ + L F + G + L+ + P+ P +I L+G
Sbjct: 1 MLCRKQRRTISIVAAAL-FWLLATGWLAAPLIAWSEAG-VTPVEHPDMHGRTTLI-LIGA 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT T ++P +RI + LY++C+Q + CT+++SGGDPQ HG E+ VY
Sbjct: 58 GTHRTDTG----VQPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVY 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+L+ GV D+ LE S T++NA+F++S++++ +LV+S+Y ++R+ L F+
Sbjct: 114 GRQLVAEGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRALLDFRR 173
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
FGI+ + ++ A +P N E AL E +GI + + G
Sbjct: 174 FGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLG 222
>gi|17544865|ref|NP_518267.1| lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
gi|17427154|emb|CAD13674.1| probable lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
Length = 251
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 123/237 (51%), Gaps = 6/237 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + ++ + L + + + L IG G +P LL L+ ++
Sbjct: 5 VLFLLVIVTAICALRRRRRTARGLAAVSLALVIAIGCGPVPAWLLDSLEGPFE--ARPAV 62
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
N IVLLG GT + +EP SY R+ E + Y++C++ C I++SGG
Sbjct: 63 TWGKRNAIVLLGAGTRRV----EGGVEPGVFSYPRLMEAAQQYQACRKTGADCKILVSGG 118
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D + HG E+ VY LL G+ DD+ LE S++T+QNAQFS + + + +LVSS
Sbjct: 119 DARHHGDPEATVYQRALLAIGIGADDVLLEPNSMNTWQNAQFSRTALAAYAPERTVLVSS 178
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
A HL+RS LYF HFG+ +D L A S +PL+ NF + + AL E+IGI +
Sbjct: 179 AIHLRRSLLYFAHFGMTPTPVRADDLQATPSPLPLAFNFAMADYALHEWIGIARYHV 235
>gi|153009344|ref|YP_001370559.1| hypothetical protein Oant_2014 [Ochrobactrum anthropi ATCC 49188]
gi|151561232|gb|ABS14730.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 235
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 89/227 (39%), Gaps = 11/227 (4%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ + + + F + + ++LL L+ + +P PQ + IV+LG
Sbjct: 6 RRLSMSVLGLSIAILFFAAFTTLGSVLLAPLEDRFAKPDAMPQH---VDGIVVLGGYMNG 62
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
E + + RIFE MRL + + + G + E+ L
Sbjct: 63 DINAGRKGFELN-SAADRIFEAMRLARLYPDARVIVSG--GDGAFFEEAAKEADSTRQML 119
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ G + E +S +T +NA FS + + G+ +LV+SAYH+ RS F+ +
Sbjct: 120 IDLGFSGERYIYENKSRNTVENAIFSKELAQPKPGETWLLVTSAYHMPRSVGCFRKADFD 179
Query: 199 TKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYIGILIAYYRG 240
A DY L +A++E++G+ + G
Sbjct: 180 VVAWPVDYKTRARERFALYLESPNEALSRFSVAMREWVGLAAYWLAG 226
>gi|291533114|emb|CBL06227.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 255
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 13/243 (5%)
Query: 4 SWIFLIVSY-WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
I L++ + +L + I+ + +S LLF + I L+K L+ YQ +
Sbjct: 17 GIISLLILFNIYLYWKKIKGKYILSMITLLFYLLSTNFIAYHLVKPLENFYQNKTIEQLK 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ ++I++LG G + I + S +R+ MRL Q + II+SGG
Sbjct: 77 QDKNDVIIMLGGGAINVADID-GEGQVSGYVANRMITVMRL-----QKELDIPIILSGGK 130
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E+ + GV + LE QS +T +N Q S +++ ++++S
Sbjct: 131 VFEDTGREADIEKRIFEGMGVNSQALILENQSRNTVENVQNSKVIMEEYNFTKPLVITSG 190
Query: 183 YHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIA 236
+HL R+ F I +DY + ++ +P + + + +A++EY+GIL
Sbjct: 191 FHLLRAMEIFAREEIEATPYVADYQMSDELVFSIFNFLPNNGSLNTSCMAIREYLGILAL 250
Query: 237 YYR 239
+
Sbjct: 251 KLK 253
>gi|33595083|ref|NP_882726.1| hypothetical protein BPP0372 [Bordetella parapertussis 12822]
gi|33565160|emb|CAE35956.1| putative exported protein [Bordetella parapertussis]
Length = 251
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 88/228 (38%), Positives = 123/228 (53%), Gaps = 6/228 (2%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ ++LF +G G I LL LQ YQ P N IV
Sbjct: 14 AGLAWRQWRRASRMLYGLSLVLFLALGCGPIAAWLLDGLQSDYQAK--PPIAWGQRNAIV 71
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
LLG GT A RIEP SY+RI E R Y C++ + C +I SGGD HG AE
Sbjct: 72 LLGAGT----EQAAGRIEPGIFSYARIVEAARRYHDCRKAAAQCKLIASGGDAAYHGDAE 127
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ VY + L+ GV+ D+ E S++T+QNAQF+S++++ ++LVSS HLKRS L
Sbjct: 128 ANVYRDPLVALGVDAADVLPEPGSMNTWQNAQFTSAVLRRYDADRVVLVSSGIHLKRSAL 187
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
YF +FG+ +DYL+A S++PLS NF + + AL EY+GI+ +
Sbjct: 188 YFAYFGVAATPVRADYLHARRSVVPLSYNFAVADFALHEYLGIVRYHV 235
>gi|27380091|ref|NP_771620.1| hypothetical protein bll4980 [Bradyrhizobium japonicum USDA 110]
gi|27353245|dbj|BAC50245.1| bll4980 [Bradyrhizobium japonicum USDA 110]
Length = 301
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 43/246 (17%), Positives = 97/246 (39%), Gaps = 21/246 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+LS + ++ + L + ++L + + + +LL L+ + + S
Sbjct: 58 ILSLVLMLTRFAALGRK------LAVTTLVLLALAAFSPLGNLLLYPLESRFPKWDPS-- 109
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG + + R+ L + + I+ +GG
Sbjct: 110 -RGAPDGIIVLGGSVDTDLSAAHRTPVV-ASAADRMLAPAELARRFP----NARIVFTGG 163
Query: 122 DPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
E+ L G+ ++ + +E S +T++NA F+ ++ G+ +LV
Sbjct: 164 SANLVSTDAKEADYSAPILESLGIPKERLIVERDSRNTWENAVFTKQLVSPKPGERWLLV 223
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYIGIL 234
+SA+H+ R+ F G + +A D+ + T++A++E+IG+L
Sbjct: 224 TSAFHMPRAMGIFHKAGFDVEAYPVDWRMGGRDDLFAFTHIGKEGLGRTDVAMREWIGLL 283
Query: 235 IAYYRG 240
G
Sbjct: 284 TYRVMG 289
>gi|22299705|ref|NP_682952.1| hypothetical protein tlr2162 [Thermosynechococcus elongatus BP-1]
gi|22295889|dbj|BAC09714.1| tlr2162 [Thermosynechococcus elongatus BP-1]
Length = 263
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 18/245 (7%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
L+ + + + + + G + L+ L+ Y L P
Sbjct: 23 LVFAIVRFWRAPKQAAIALVIALTILLLSGNDYVAATLIASLERQY----LPPHPMPKAA 78
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG T P +E + RI L++ + + +
Sbjct: 79 AIVVLGGAVVP-QTAPRPWVEV-TEGGDRILYGAHLFRQGSDPYLILSGGRINWLGETFQ 136
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL-VSSAYHLK 186
AE++ GV RD I LET SL+T+QNA ++++ Q + +L V+SAYH+
Sbjct: 137 QAEAVDMAEIATTCGVPRDKILLETSSLNTYQNAVNVKALLEKHQMQGKLLLVTSAYHMP 196
Query: 187 RSQLYFQHFGINTKASCSDYLNA-----------YYSIIPLSANFYLTELALKEYIGILI 235
R+ F+ G++ + +DY S+IP N +T +AL+EY G+LI
Sbjct: 197 RAVAIFRRLGMDVIPAPTDYRYPTIARSPTWQNLLLSLIPNPYNVDITTIALREYQGLLI 256
Query: 236 AYYRG 240
RG
Sbjct: 257 YRLRG 261
>gi|149191740|ref|ZP_01869980.1| hypothetical protein VSAK1_04082 [Vibrio shilonii AK1]
gi|148834429|gb|EDL51426.1| hypothetical protein VSAK1_04082 [Vibrio shilonii AK1]
Length = 297
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L ++ L++ + + + + + F I + + + LL L+ Y L
Sbjct: 19 LILGFLGLVLIMFTA-RRKLGSLIILVSLCGTF-LISFQPLSSRLLMPLERQYSAFL--- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG G + IP E S S R+ E +R+ + + +
Sbjct: 74 PINETIDYVMVLGGGHVVDDQIP-PTSELSRASLMRLSEGIRILRMYPGAKLILS----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G G++ + L G+ + DI L + DT++ A+ ++ ++N + LV+
Sbjct: 128 GYDGGTGVSHARTMAKVALALGIAKPDIILLETAKDTWEEARQAAGFVQNKKLV---LVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+KR+ F+ G+N + +++L A+ P S TE E +G++
Sbjct: 185 SASHMKRAMHEFEAAGLNPLPAPTNFLAQKDIEQAWQKYTPSSRYLEQTERYWHETMGLI 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQNLR 249
>gi|291614927|ref|YP_003525084.1| hypothetical protein Slit_2472 [Sideroxydans lithotrophicus ES-1]
gi|291585039|gb|ADE12697.1| protein of unknown function DUF218 [Sideroxydans lithotrophicus
ES-1]
Length = 251
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 14/227 (6%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + ++ + L + +L+ L+ P ++ K + IV+LG GT
Sbjct: 34 KRPVIARTLLTVSVALLWLLSTPFFAEAMLQGLEGQ---PFVNDTSKPQADAIVVLGGGT 90
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
S ++ R+ RLY+ I+++GG P + L+E+
Sbjct: 91 NFRAPEYGG-DTVSKETLERLRYAARLYRQ-----TGKPILVTGGTPLGNDLSEAAQMKK 144
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L + E S +T +NA+ S ++K I LV+ A+H+ R+ FQ G
Sbjct: 145 TLEQEFNVPVR-WAEGASNNTLENARLSREVLKKEGISRIYLVTHAWHMPRAVQVFQAAG 203
Query: 197 INTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + Y Y IP ++ + + + E IG+L +
Sbjct: 204 FQVYPAPTAYTTRYQLDLLVFIPSASALRDSRIFMHEMIGLLWYRLK 250
>gi|307730038|ref|YP_003907262.1| hypothetical protein BC1003_2008 [Burkholderia sp. CCGE1003]
gi|307584573|gb|ADN57971.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1003]
Length = 225
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 5/220 (2%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ + C + F + G + LL P I+LLG GT
Sbjct: 4 KRARRPLLYCTIAFFWLLSAGWLTAPLLSLA--QPVAQTSPPASFAPRTAIILLGGGTVY 61
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ P + +RI + R Y +CK+ + CT+I+SGG+PQ+H +E+ Y L
Sbjct: 62 NRDK---VLVPPREVLARIDVSARNYAACKRTATVCTVIVSGGNPQRHPASEADTYLPYL 118
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L V R DI LE QSL T++NA+ S+++ + ++ILV+SAYH+ R+ L F+HFG++
Sbjct: 119 LREQVPRSDIVLENQSLTTYENARNVSAIVGQSRYDSLILVTSAYHMPRALLDFRHFGLD 178
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ S A ++P +N E+AL E IGI +
Sbjct: 179 PQPLISSARRARLGVLPRYSNLANAEIALHELIGIAQYHV 218
>gi|171318455|ref|ZP_02907610.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
gi|171096369|gb|EDT41271.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
Length = 224
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 117/229 (51%), Gaps = 10/229 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+LC+ R+ ++LF + G + L+ + P+ P +I+ LG
Sbjct: 1 MLCRKRRRQI-AIAGVVLFWLLATGWLAAPLIAWTEAG-VTPVERPDMHGRTTLII-LGI 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT T + +RI +T LY++C Q + CT+++SGGDPQ HG E+ VY
Sbjct: 58 GTRRGDTG----LRAPPDGEARIRKTAALYRTCLQQATRCTVVMSGGDPQHHGETEAAVY 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+L+E GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+H
Sbjct: 114 GRRLVEEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFRH 173
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
FGI+ + S+ A +P N AL E +GI + + G
Sbjct: 174 FGIDPQPVYSNRRRARMGWLPRRDNLENANRALHELVGIAQFHVYRWLG 222
>gi|325923915|ref|ZP_08185510.1| hypothetical protein XGA_4563 [Xanthomonas gardneri ATCC 19865]
gi|325545597|gb|EGD16856.1| hypothetical protein XGA_4563 [Xanthomonas gardneri ATCC 19865]
Length = 253
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 131/237 (55%), Gaps = 4/237 (1%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ +FL+ + + L +G G + + +L LQ +
Sbjct: 5 LVCVLFLLSWLIGRRRWRRSARALAAATLALLLLVGCGPLSSWMLHGLQQTGVNDF---N 61
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ N+IVLLG GT + P P E + +Y RI E+ RLY+ C+ H C I ISGG
Sbjct: 62 DWRARNMIVLLGAGT-VRPDGPDATAEANMFAYGRIVESARLYRQCRAHGGDCKIEISGG 120
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D + GL+E++VY L+ G+++ D+ +E S++T+QNAQFS +++ + ++LVSS
Sbjct: 121 DARGLGLSEAVVYRKVLIGIGIDQADLIMEPSSMNTWQNAQFSQPLLRKYRADRVVLVSS 180
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
A HL+R++LYF+HFGI SD+L A ++ +P S NF + ++AL EY+GI
Sbjct: 181 ATHLRRAELYFRHFGIEATPVRSDWLTASWAWLPQSYNFTVADVALHEYLGIARYRV 237
>gi|206889829|ref|YP_002248307.1| hypothetical protein THEYE_A0462 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741767|gb|ACI20824.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 235
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + LL I + +LL L+ SY K D + IV+LG G
Sbjct: 30 KRRNFIRYLAFFSALLVYLISIEPVKDLLLYPLEKSYSV-----SEKLDADAIVILGGGV 84
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ P S +R+F +Y+ K II+SGG + +++S
Sbjct: 85 YSWASFPE-------DSSNRLFTGYLVYRKTK-----LPIIVSGGAVEG-KISDSAAMAA 131
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L E GVE I E +S DT QNA + + + K K +ILV+SAYH+KR+ +F+ G
Sbjct: 132 MLKEFGVEDSKIIEENKSRDTAQNALYVAKICKEKSFKKVILVTSAYHMKRAVKFFKQAG 191
Query: 197 INTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIA 236
+ +D+ + YS +P NF L+ A++E+I +++
Sbjct: 192 LEVLPYPADFKQSNHYNIYSFLPKFGNFALSSKAIREHIALIVY 235
>gi|163852963|ref|YP_001641006.1| hypothetical protein Mext_3555 [Methylobacterium extorquens PA1]
gi|163664568|gb|ABY31935.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 275
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 91/226 (40%), Gaps = 9/226 (3%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R ++ +L +F G + L L+ + + + + I++L G +
Sbjct: 23 RRFGTGLAWAGVLATFSGLTPLANWALLPLEQRFPAQV---DDVRPVDGIIVLSGGIDLT 79
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ R+E + + RI + L Q + T + E+++ L
Sbjct: 80 TSRTRGRLELN-DAGDRITALIDLAHRYPQARLVYTGGDPYPTGGRARPTEAVLAAAYLE 138
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ I +E +S T +NA +++ G+ +L++SA+H+ R+ F+ G+
Sbjct: 139 GIGIAPARITVEARSRTTAENASEVRKLLEPHPGERWLLITSAWHMPRAMGAFRRVGLEL 198
Query: 200 KASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ D+ ++ + +L ++A KE+ G+++ G
Sbjct: 199 EPYPVDFRTAGPFATRFTFRHAADGLHLLDVAAKEWAGLVVYRLTG 244
>gi|160902984|ref|YP_001568565.1| hypothetical protein Pmob_1541 [Petrotoga mobilis SJ95]
gi|160360628|gb|ABX32242.1| protein of unknown function DUF218 [Petrotoga mobilis SJ95]
Length = 214
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 13/217 (5%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSP-QWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
++ G I++ L+ Y +S ++ +IV+LG G E
Sbjct: 4 IVIYIFSSGWFAKIIVLPLENRYPPVNVSQLDDTQEKGVIVVLGGGIIPETPR-EGSGEL 62
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S + R++E LY ++ I+++GG + E+ + +LL+ GV+ +DI
Sbjct: 63 SDSAMKRVYEGFLLY-----KNLQIPIVVTGGKLLGTEIPEAQIMKEELLKMGVKPNDIY 117
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLN 208
+E + +T QNA+F+ +++++ + + I L++SA HL R+ YF+ + I+ +DY
Sbjct: 118 VEPLAKNTKQNAEFTLTLLESDEVQKIYLITSAIHLPRAMNYFKSYTNIDVVPVPTDYKI 177
Query: 209 A-----YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +Y +P T A EY+G++ G
Sbjct: 178 SREELKWYDFLPDMRFLEATSSAWHEYLGLVKFKISG 214
>gi|220933067|ref|YP_002509975.1| hypothetical protein Hore_22350 [Halothermothrix orenii H 168]
gi|219994377|gb|ACL70980.1| uncharacterized conserved protein [Halothermothrix orenii H 168]
Length = 256
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSP 60
L I+++++ + + +S R I ++C L+ +I + +L L L+ + P +
Sbjct: 17 LFLVIWVVITVYLIKKRSNRLIVGLACISLVLMYILSSAVGVMLFLIPLETKF--PYYNI 74
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IV+LG G ++ P + R+ RLY + I G
Sbjct: 75 SRYDKELPIVVLGGGINYFGEKGEGKLNP--ITLQRLVTGYRLY----KEVETTLIFTGG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIIL 178
G +E+ V L E G+ ++ + LE ++ +T++N + ++ + + L
Sbjct: 129 QGIGHSGPSEADVAGEFLRELGINQEALVLENRARNTYENGLYVRDYLEQRNGLDRGVYL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCS----DYLNAYYSIIPLSANFYLTELALKEYIGIL 234
V+SA HL R+ F+ + + D+ + P +N T A+ E+IG+L
Sbjct: 189 VTSAVHLPRAVGVFRRLNLKVVPVPAGYFADHTQGWLDFFPARSNLNATLAAIHEWIGLL 248
Query: 235 IAYYRG 240
RG
Sbjct: 249 WYKVRG 254
>gi|119485358|ref|ZP_01619686.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
gi|119457114|gb|EAW38240.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
Length = 263
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 22/239 (9%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
Q ++ +L+ + L++ L++ + IV+LG G
Sbjct: 31 WKQPRWAAGAIALGLLVLLTSSNSGVSQSLVRSLEWQ----NIPNGELPKATAIVVLGGG 86
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T P ++ RI LYK K + + ES
Sbjct: 87 TK--APTPPRPWVDVGEAGDRILYGALLYKQDKAPWLILSG--GRIQWDGKEPPESADMK 142
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKRSQLYFQH 194
+E GV I + SL+T+QNA + +N ++LV+SA H+ RS L FQ
Sbjct: 143 EIAVEMGVRESAILQDPDSLNTYQNAVNVRQILAENNLTGKVLLVTSALHMPRSLLVFQR 202
Query: 195 FGINTKASCSDYLNA-------------YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
GI + +D+L + ++IP + + ALKEYIG+++ RG
Sbjct: 203 QGIEVIPAPTDFLVSQQDLQPSTTIQGRILNLIPDTQSLQQFTQALKEYIGMIVYRLRG 261
>gi|198284290|ref|YP_002220611.1| hypothetical protein Lferr_2201 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198248811|gb|ACH84404.1| protein of unknown function DUF218 [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 264
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 12/243 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + + ++ M + F I +LL L+ Y
Sbjct: 19 VLFVLAALGWLAEIVGWRYLGRVLMLLALGTLYFFSTAIGARLLLLPLEDRYPPLTKPLH 78
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
I++LG G ++ + + + + ++ R+ +L + II SGG
Sbjct: 79 GADTPQAIIVLGGG-EVMQSPGSNQETANARTLVRLLAAAQLARQ-----TGLPIIPSGG 132
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ AE++ L + + I ETQS +T NA S++++ G LV+S
Sbjct: 133 APRLGAPAEALTMEFILRQDLGVQSTIWPETQSYNTAANATDSAAILAEHHGHQAYLVTS 192
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTELALKEYIGILI 235
A H+ R+ +F+ G+ +DY S +P + ++ A EY+G+L
Sbjct: 193 ALHMPRAVAWFRRAGVKVVPVPTDYRLDRVNGLRLESWLPRAIYLEISSEASHEYLGLLW 252
Query: 236 AYY 238
+
Sbjct: 253 LWI 255
>gi|218667128|ref|YP_002426951.1| hypothetical protein AFE_2571 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|218519341|gb|ACK79927.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 266
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 12/243 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + + ++ M + F I +LL L+ Y
Sbjct: 21 VLFVLAALGWLAEIVGWRYLGRVLMLLALGTLYFFSTAIGARLLLLPLEDRYPPLTKPLH 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
I++LG G ++ + + + + ++ R+ +L + II SGG
Sbjct: 81 GADTPQAIIVLGGG-EVMQSPGSNQETANARTLVRLLAAAQLARQ-----TGLPIIPSGG 134
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ AE++ L + + I ETQS +T NA S++++ G LV+S
Sbjct: 135 APRLGAPAEALTMEFILRQDLGVQSTIWPETQSYNTAANATDSAAILAEHHGHQAYLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTELALKEYIGILI 235
A H+ R+ +F+ G+ +DY S +P + ++ A EY+G+L
Sbjct: 195 ALHMPRAVAWFRRAGVKVVPVPTDYRLDRVNGLRLESWLPRAIYLEISSEASHEYLGLLW 254
Query: 236 AYY 238
+
Sbjct: 255 LWI 257
>gi|172060464|ref|YP_001808116.1| hypothetical protein BamMC406_1412 [Burkholderia ambifaria MC40-6]
gi|171992981|gb|ACB63900.1| protein of unknown function DUF218 [Burkholderia ambifaria MC40-6]
Length = 224
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 10/229 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+LC+ R+ +F + G + L+ + P+ P +I LG
Sbjct: 1 MLCRKRRRQI-AIAGAAVFWLLATGWLAAPLIAWTEAG-VTPVEHPDMHGRTTLIT-LGI 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT T ++ +RI T LY++C Q + CT+++SGGDPQ HG E+ VY
Sbjct: 58 GTRRGETG----LQAPPDGEARIRTTAALYRTCVQQATRCTVVMSGGDPQHHGETEAAVY 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+L+ GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+H
Sbjct: 114 GRRLVAEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFRH 173
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
FGI+ + S+ A +P N AL E +GI + + G
Sbjct: 174 FGIDPQPVYSNRRRAQLGWLPRRDNLENANRALHELVGIAQFHVYRWLG 222
>gi|262404134|ref|ZP_06080689.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC586]
gi|262349166|gb|EEY98304.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC586]
Length = 283
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L FI + I T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGIFFISFQPIATRLLMPLERTYTAFLPVE- 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG + IP E S + R+ E +R+ + M + G
Sbjct: 77 --GTVDYVMVLGNGHVVDDDIP-PTSELSRAALMRLAEGIRINRMYPGSKMILS-----G 128
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ ++LV+S
Sbjct: 129 YAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQK---RMVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+N + +++L + IP + TE E +G+L
Sbjct: 186 ASHMKRAMREFEAAGLNPIPAPTNFLGHLNIAQPWDKYIPKARYLEQTEQYWYETLGLLW 245
Query: 236 AYYR 239
R
Sbjct: 246 QKLR 249
>gi|134295565|ref|YP_001119300.1| hypothetical protein Bcep1808_1457 [Burkholderia vietnamiensis G4]
gi|134138722|gb|ABO54465.1| protein of unknown function DUF218 [Burkholderia vietnamiensis G4]
Length = 224
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 7/224 (3%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+LC+ R+ +F + G + L+ + P+ P +I +LG
Sbjct: 1 MLCRKQRR-HIAIAGAAVFWLLATGWLAAPLIAWSEAG-VAPVEHPDMHGRTTLI-VLGT 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT + P +RI +T LY+ C++ ++ CT+++SGGDPQ+HG E+ VY
Sbjct: 58 GTRRSDNG----LRPPPDGEARIRKTAALYRVCREQTIRCTVVMSGGDPQRHGDTEAAVY 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL GV D+ LE S T++NA+F++S++++ + ILV+S+Y ++R+ L F+H
Sbjct: 114 GRLLLAQGVAPADLILEPDSRTTYENAKFTASILRSQHDDSRILVTSSYQMRRALLDFRH 173
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
FGI+ + ++ A ++P N A+ E IGI Y
Sbjct: 174 FGIDPQPVYANRRLAQCGLLPRWRNLAAANQAVHELIGIAQFYV 217
>gi|209884886|ref|YP_002288743.1| hypothetical protein OCAR_5752 [Oligotropha carboxidovorans OM5]
gi|209873082|gb|ACI92878.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 264
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 94/244 (38%), Gaps = 11/244 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L++ I L+ L+ + + L G+ + LL L +
Sbjct: 18 LVATICLLGLLLTLVRWRKAGARISAAGIALLLVCGFSPLGNWLLLPLSERFPAWH---D 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LG + T E + S R+ L + + +
Sbjct: 75 DGRAPDGIVVLGGAISPDLTAERGTAELNA-SAERMTAAAELARRFPNAKIVLSG--GNA 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E+ V L GV D I E +S +T++NA F+ ++K G+ +LV+S
Sbjct: 132 NVFHPLSTEAEVGRVLLENLGVAADRIVREDRSRNTYENAIFTRDVVKPKPGERWLLVTS 191
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKEYIGILIA 236
AYH+ R+ F+ +A D+ + + + LSA + A +E++G++
Sbjct: 192 AYHMPRAIGVFRAANFPVEAYPIDWRTSGWKEAGRPFLKLSAGLARLDTAAREWVGLIGY 251
Query: 237 YYRG 240
G
Sbjct: 252 RLAG 255
>gi|114704894|ref|ZP_01437802.1| hypothetical protein FP2506_08156 [Fulvimarina pelagi HTCC2506]
gi|114539679|gb|EAU42799.1| hypothetical protein FP2506_08156 [Fulvimarina pelagi HTCC2506]
Length = 270
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 102/246 (41%), Gaps = 13/246 (5%)
Query: 2 LLSWIFLIVSYW--HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L++ I + + W L F L + + + + +L+ ++RP+
Sbjct: 16 LVAIILVAFAGWIAFLFGFRRTGKSFFVLAALSLAIVSVSPLGLAMTAYLENRFERPVPM 75
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + + I++LG IE + ++ R ++ L ++ + + ++
Sbjct: 76 P---AEVDGIIVLGGAFDTRVARTRGVIELN-EAADRASVSVALARTYPGADVLFSGGVA 131
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
+ + E+ L G++ + +KL+ ++ DTF+NA ++ ++ G+ +LV
Sbjct: 132 AA--FREDIPETQSAEQFYLGLGLDPNRLKLDGKARDTFENAVYAKALADPQPGETWLLV 189
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGIL 234
+SAYH+ R+ F+ G + DY + + N A++EYIG+
Sbjct: 190 TSAYHMPRAMGCFRTVGFDVVPYPVDYRTPEGADVWRPSTATTRNLEKVHFAIREYIGLA 249
Query: 235 IAYYRG 240
+ G
Sbjct: 250 AYWAAG 255
>gi|90419579|ref|ZP_01227489.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336516|gb|EAS50257.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 263
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 46/245 (18%), Positives = 92/245 (37%), Gaps = 14/245 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL I +++ W L + + + ++ L+ + RP L P
Sbjct: 19 ILLVAILGLLAGW--LGRPRIAAGLFVLATATLAVCSLTPLGLVMTAVLEDRFPRPDLPP 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG E + + R+ M L + + + + ++
Sbjct: 77 A----IDGIIVLGGAFDTRVARTRGMNELN-DAADRVTAGMELAQRYPKAKLLFSGGVAA 131
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ E+ G+ D + L+ ++ DTF+NA F+ + + G+ +LV+
Sbjct: 132 LLEEDIPETEAAEA--LYRGLGLAPDRLLLDGRARDTFENAVFAKELAQPKPGEVWVLVT 189
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA--YYSIIPLS---ANFYLTELALKEYIGILI 235
SA H+ R+ F+ G + DY P S N A++EY+G++
Sbjct: 190 SASHMPRAVGCFRVAGFDIVPYPVDYRTPSGPALWRPSSTTTRNLEKVHFAIREYLGLVA 249
Query: 236 AYYRG 240
G
Sbjct: 250 YRLSG 254
>gi|54309547|ref|YP_130567.1| hypothetical protein PBPRA2380 [Photobacterium profundum SS9]
gi|46913983|emb|CAG20765.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 284
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L +I L++ W + + F F+ +F + + I T LL+ L+ Q + S
Sbjct: 19 LILGFIGLLI-LWFTRRKGLASGFIAFAFLGIFM-VSFQPIATSLLRPLETENQPFVPSS 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G I +P I E S + R+ E MR+Y+ + +
Sbjct: 77 ---TPVDYIMVLGSGHVIDKAMP-ITSELSRAALMRLSEGMRIYRLFPGSKLILS----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++++ + L GV + DI L + DT++ A ++S++ KN++LV+
Sbjct: 128 GYGGGSDISQARMMAKVALALGVNKSDILLLETARDTWEEAFQAASVVG---DKNMVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+ + +++ + P + TE E +G +
Sbjct: 185 SASHMTRALYEFNQAGLTPTPAPTNFLASNKIKQPWDRYAPKAKYLEQTERYWHETMGQI 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQRIR 249
>gi|258621490|ref|ZP_05716524.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258586878|gb|EEW11593.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 287
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L + + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFLPVE- 85
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG + IP E S + R+ E +R+ + M + G
Sbjct: 86 --GTIDYVMVLGNGHVVDDDIP-PTSELSRAALMRLTEGIRISRMYPGSKMILS-----G 137
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + + L GV + DI L + DT++ A+ +++ ++ ++LV+S
Sbjct: 138 YAGGSEFSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQK---RMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP + TE E +G+L
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIAQPWDKYIPKARYLEQTEQYWHETLGLLW 254
Query: 236 AYYR 239
R
Sbjct: 255 QKLR 258
>gi|312796171|ref|YP_004029093.1| integral membrane protein [Burkholderia rhizoxinica HKI 454]
gi|312167946|emb|CBW74949.1| Integral membrane protein [Burkholderia rhizoxinica HKI 454]
Length = 239
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML++++ L+ + + R++ + G + L L+ P SP
Sbjct: 1 MLVAFVALLWLVAIAVSRRHRRM-TCVAAAFFAYLLCAGWLGEPALHALETC--VPAASP 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IVLLG+GT A R+ P F ++ RI + C+ CT+++SG
Sbjct: 58 PRYGGNVAIVLLGSGTEYDD---AHRLVPKFDAWRRIDAAAAQFILCRAQRAQCTLVVSG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQKH +E+ Y L+ GV +I LE SL+T++NA+ + ++++ I+L++
Sbjct: 115 GNPQKHEHSEAANYQPHLVSHGVPAANIVLEPDSLNTYENARNTGAILRRHHYDQIVLIT 174
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SAYHL R+ L F HFGI+ S+Y S P A+ T +A E+IG+ Y
Sbjct: 175 SAYHLPRALLDFHHFGIDVVPLASNYRWRRPSWRPHPAHVINTSIAWHEWIGLAQFYV 232
>gi|163852418|ref|YP_001640461.1| hypothetical protein Mext_3001 [Methylobacterium extorquens PA1]
gi|163664023|gb|ABY31390.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 278
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 12/228 (5%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ I ++ ++ F+ L G + L L+ + IV+LG
Sbjct: 49 RGIGRVLTIASFVGLL-VAGLSPLSAWTLAPLENRFPSFT---DDGTPVTGIVVLGGTVE 104
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+I +I + ++ R L + Q + + G ++ ++E+ + +
Sbjct: 105 ADTSIGRDQITVN-EAGERAIALADLARRYPQARLVFSG--GAGSTREDAVSEAEIVSRY 161
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
GV R+ + LE QS +T +NA FS+ M++ G+ +LV+SA+H+ RS F+ G
Sbjct: 162 ADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRKAGF 221
Query: 198 NTKASCSDYLNAYYSIIPL-----SANFYLTELALKEYIGILIAYYRG 240
+ A DY + S ++ +KE+IG++ G
Sbjct: 222 DVTAYPVDYRTNWPRDAYRLASFASDGLGELDIGVKEWIGMIAYRLTG 269
>gi|306844040|ref|ZP_07476635.1| Hypothetical protein BIBO1_0705 [Brucella sp. BO1]
gi|306275795|gb|EFM57519.1| Hypothetical protein BIBO1_0705 [Brucella sp. BO1]
Length = 264
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 98/247 (39%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAAWRGFRRVGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 75 LPQH---VDGIIVLGGYMNGEIGAGRQNFELN-SAADRIVETMRLARLYPDAKIIVSG-- 128
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ L + G D E +S +T +NA FS ++ + G+ +L
Sbjct: 129 GEGTFFEKSAREAETTRALLSDLGFSGDRYIFEGKSRNTVENAIFSQALAQPKPGETWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ R+ F+ G + A DY + + +AL+E+ G+
Sbjct: 189 VTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGL 248
Query: 234 LIAYYRG 240
++ G
Sbjct: 249 AAYWWTG 255
>gi|294852515|ref|ZP_06793188.1| hypothetical protein BAZG_01442 [Brucella sp. NVSL 07-0026]
gi|294821104|gb|EFG38103.1| hypothetical protein BAZG_01442 [Brucella sp. NVSL 07-0026]
Length = 264
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLATWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 75 LPQH---VDGIIVLGGYMNGEIVAGRQNFELN-SAADRIVETMRLARLYPDAKILVSG-- 128
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ LL+ G + E +S +T +NA FS ++ + G+ +L
Sbjct: 129 GEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ R+ F+ G + A DY + + +AL+E+ G+
Sbjct: 189 VTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGL 248
Query: 234 LIAYYRG 240
++ G
Sbjct: 249 AAYWWTG 255
>gi|262171274|ref|ZP_06038952.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus MB-451]
gi|261892350|gb|EEY38336.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus MB-451]
Length = 277
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L + + + T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFLPVE- 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG + IP E S + R+ E +R+ + M + G
Sbjct: 77 --GTIDYVMVLGNGHVVDDDIP-PTSELSRAALMRLTEGIRISRMYPGSKMILS-----G 128
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + + L GV + DI L + DT++ A+ +++ ++ ++LV+S
Sbjct: 129 YAGGSEFSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQK---RMVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP + TE E +G+L
Sbjct: 186 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIAQPWDKYIPKARYLEQTEQYWYETLGLLW 245
Query: 236 AYYR 239
R
Sbjct: 246 QKLR 249
>gi|118591094|ref|ZP_01548493.1| hypothetical protein SIAM614_15747 [Stappia aggregata IAM 12614]
gi|118436170|gb|EAV42812.1| hypothetical protein SIAM614_15747 [Stappia aggregata IAM 12614]
Length = 265
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 89/245 (36%), Gaps = 13/245 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ + + R + L+ L+ +QRP
Sbjct: 19 LIVLMAAGLLLSLSARWRRRGRLLTFAGFAGLVVCAFSPAANWLIVPLEDRFQRPA---- 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ + I++LG + T S R+ T RL K+ + T G
Sbjct: 75 TLENYDGIIILGGAVDTVVTGVRGDTAL-TMSAERVTITARLAKALPAAKIIHTG--GQG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
E+ + G+ + I LE QS +T+QNA ++ +++ G+ +LV+S
Sbjct: 132 MIVSSQATEAEGAARLFRDFGIAPERIILEDQSQNTWQNAVYAKKIVQPQPGQRWLLVTS 191
Query: 182 AYHLKRSQLYFQHFGIN-TKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILI 235
AYH+ RS F+ G A D+ + S ++A +E++G+ +
Sbjct: 192 AYHMPRSMGVFEKAGWTGVTAYPVDFRTRGPQDSMLGFDGASKGLRRFDIAFREWVGLAV 251
Query: 236 AYYRG 240
G
Sbjct: 252 YKLLG 256
>gi|83717478|ref|YP_438905.1| hypothetical protein BTH_II0706 [Burkholderia thailandensis E264]
gi|167577281|ref|ZP_02370155.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis TXDOH]
gi|167615420|ref|ZP_02384055.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis Bt4]
gi|257141992|ref|ZP_05590254.1| hypothetical protein BthaA_22676 [Burkholderia thailandensis E264]
gi|83651303|gb|ABC35367.1| Uncharacterized ACR, COG1434 family [Burkholderia thailandensis
E264]
Length = 255
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 78/239 (32%), Positives = 125/239 (52%), Gaps = 6/239 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ I + + L + + F IG G +P LL+ LQ Y
Sbjct: 5 LLTAIVFVAALLRLAKRRRASLALFVASAAAFFAIGCGPVPAWLLRELQAPYA--ARPAI 62
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIIS 119
+ N IV+LG T I +EP SYSR+ E LY+ C++ + C I++S
Sbjct: 63 AWGERNAIVMLGLATEKIA--ATGAVEPGTFSYSRVVEAASLYRDCRRARANAGCKILVS 120
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGD +++G E+ +Y + L+ GV+ D+ E +S++T+QNAQF+ +++ + ++LV
Sbjct: 121 GGDARRNGAPEASIYRDALIGLGVDAADVLSEPRSMNTWQNAQFTRAVLDGYRADRVLLV 180
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S HL+RS LYF HFG+ ++YL A +PL+ NF + +LAL E +GI
Sbjct: 181 TSGVHLRRSALYFAHFGVAAIPVRAEYLQAVTFPLPLAYNFSVADLALHECLGIARYRL 239
>gi|190576332|ref|YP_001974177.1| putative exported lipoprotein [Stenotrophomonas maltophilia K279a]
gi|190014254|emb|CAQ47898.1| putative exported lipoprotein [Stenotrophomonas maltophilia K279a]
Length = 258
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 8/225 (3%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + +R ++ L I +LL Q P + IV+LG
Sbjct: 15 LVRKRHVRSGALLAVAPLAILASASAPITQLLLDLAQD---APPSTATAHHPRTAIVVLG 71
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G P YSR+ + Y +C++ C +++SGG AE+ V
Sbjct: 72 AGIDQDAHGSR----PGLAGYSRLMAATQRYLACERTGESCVVLVSGGATAPDNAAEANV 127
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y +L+ GV + I E S++T+QNA SS MI ++LV+S HL+RS +YF+
Sbjct: 128 YARELIALGVPAEHIIREHASVNTWQNASNSSRMI-QRDSVRVVLVTSGLHLRRSLIYFR 186
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
HFG+ + SD L A +P + N L E+ L EYIG+L +
Sbjct: 187 HFGVVAEGLPSDRLRASPGWLPSAYNLLLIEVMLHEYIGVLRYHV 231
>gi|170702081|ref|ZP_02892995.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
gi|170133010|gb|EDT01424.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
Length = 224
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 10/229 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+LC+ R+ + +F + G + L+ + P+ P +I LG
Sbjct: 1 MLCRKRRRQI-AIAGVAVFWLLATGWLAAPLIAWTEAG-VTPVEHPDMHGRTTLIT-LGI 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT T + +RI +T LY++C Q + CT+++SGGDPQ HG E+ VY
Sbjct: 58 GTRRGETG----LRAPPDGEARIRKTAALYRTCLQQATRCTVVMSGGDPQHHGETEAAVY 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+L+ GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+H
Sbjct: 114 GRRLVAEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFRH 173
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
FGI+ + S+ A +P N AL E +GI + + G
Sbjct: 174 FGIDPQPVYSNRRRAQLGWLPRWRNLEDANQALHELVGIAQFHVYRWLG 222
>gi|115351425|ref|YP_773264.1| hypothetical protein Bamb_1372 [Burkholderia ambifaria AMMD]
gi|115281413|gb|ABI86930.1| protein of unknown function DUF218 [Burkholderia ambifaria AMMD]
Length = 224
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 10/229 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+LC+ R+ +F + G + L+ + P+ P +I LG
Sbjct: 1 MLCRKRRRQI-AIAGAAVFWLLATGWLAAPLIAWTEAG-VTPVEHPAMHGRTTLIT-LGI 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT T ++ +RI T LY++C Q + CT+++SGGDPQ HG E+ VY
Sbjct: 58 GTRRGETG----LQAPPDGEARIRTTAALYRTCVQQATRCTVVMSGGDPQHHGETEAAVY 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+L+ GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+H
Sbjct: 114 GRRLVAEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFRH 173
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
FGI+ + S+ A +P N AL E +GI + + G
Sbjct: 174 FGIDPQPVYSNRRRAQLGWLPRRDNLENANRALHELVGIAQFHVYRWLG 222
>gi|269963112|ref|ZP_06177447.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832076|gb|EEZ86200.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 268
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 18/230 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ F + + + + + T LL L+ Y+ L + +++LG G
Sbjct: 34 KRKTGCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFLPVS---GTVDYVMVLGAGHV 90
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ IP + S + R+ E +R+ + + + G ++ + + N
Sbjct: 91 VDDEIP-PTSQLSRTALMRLTEGIRILRMYPGAKLILS-----GYAGGSEISHARMMANV 144
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L GV + DI L + DT++ A+ +++ +K LV+SA H+KR+ F GI
Sbjct: 145 ALSLGVAKSDIILLEDAKDTWEEARQAAAFVKQKDIV---LVTSASHMKRALYEFNAAGI 201
Query: 198 NTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ ++++ + P + TEL EY+G L R N
Sbjct: 202 KPIPAPTNFMAIDDIEQPWQKYAPKARYLEQTELYWHEYLGGLWQKLRDN 251
>gi|23502055|ref|NP_698182.1| hypothetical protein BR1177 [Brucella suis 1330]
gi|62290089|ref|YP_221882.1| hypothetical protein BruAb1_1183 [Brucella abortus bv. 1 str.
9-941]
gi|82700013|ref|YP_414587.1| hypothetical protein BAB1_1199 [Brucella melitensis biovar Abortus
2308]
gi|225627645|ref|ZP_03785682.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237815595|ref|ZP_04594592.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|256369602|ref|YP_003107112.1| hypothetical protein BMI_I1188 [Brucella microti CCM 4915]
gi|297248487|ref|ZP_06932205.1| hypothetical protein BAYG_01444 [Brucella abortus bv. 5 str. B3196]
gi|23348011|gb|AAN30097.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196221|gb|AAX74521.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616114|emb|CAJ11155.1| Protein of unknown function DUF218 [Brucella melitensis biovar
Abortus 2308]
gi|225617650|gb|EEH14695.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237788893|gb|EEP63104.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255999764|gb|ACU48163.1| hypothetical protein BMI_I1188 [Brucella microti CCM 4915]
gi|297175656|gb|EFH35003.1| hypothetical protein BAYG_01444 [Brucella abortus bv. 5 str. B3196]
Length = 268
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 19 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 78
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 79 LPQH---VDGIIVLGGYMNGEIVAGRQNFELN-SAADRIVETMRLARLYPDAKILVSG-- 132
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ LL+ G + E +S +T +NA FS ++ + G+ +L
Sbjct: 133 GEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETWLL 192
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ R+ F+ G + A DY + + +AL+E+ G+
Sbjct: 193 VTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGL 252
Query: 234 LIAYYRG 240
++ G
Sbjct: 253 AAYWWTG 259
>gi|90579519|ref|ZP_01235328.1| hypothetical protein VAS14_01116 [Vibrio angustum S14]
gi|90439093|gb|EAS64275.1| hypothetical protein VAS14_01116 [Vibrio angustum S14]
Length = 275
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++ +I L+V W + + F+ +F+ + + + T LL+ L+ Y + S
Sbjct: 19 LIIGFIGLLV-LWFTRNKKLASGIIAFSFLGIFA-VSFQPVSTSLLRPLEQQYPAFVGSS 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K N +++LGN I T P I E S + R+ E +R+ + M +
Sbjct: 77 ---KPINFVMVLGNSHVIDKTFP-ITSELSRTALMRLVEGIRIARMYPGSKMILS----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ + + L GV + DI L + DT++ A ++S++ + LV+
Sbjct: 128 GYGGGTDISHARMMAKVALALGVSKSDILLLETAKDTWEEAHQAASVVGDKNLV---LVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+N + +++ + P S Y TE E +G L
Sbjct: 185 SASHMSRALYEFHQAGLNPIPAPTNFLASNKIKQPWIRYAPSSQFLYQTERYWHEKLGSL 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQQLR 249
>gi|152992958|ref|YP_001358679.1| hypothetical protein SUN_1369 [Sulfurovum sp. NBC37-1]
gi|151424819|dbj|BAF72322.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 251
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 15/245 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI-FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ L F +++ + L Q +R+ F+ ++ + ILL ++ +Y +
Sbjct: 16 LPLGVFFFLMAIFFLSRQKVRRAKSFLYVGIIWLFLFSYAPFANILLHPIESAYSALQHA 75
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P K+ I +LGNG T T+P I + + ++ R+ E +RLY+ + TII+S
Sbjct: 76 P---KNTRYIYVLGNGHTTDRTLP-ITSQLASEAIVRLNEGIRLYRQ---LEGNATIILS 128
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + + + G++ D+ L T + DT + AQ + + K+ ILV
Sbjct: 129 GYEGLHDPTPHAFMQEKLATALGIDPKDLILRTTAKDTEEEAQAARQIAKDQPL---ILV 185
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIGILI 235
+SAYH+ R+ +F+ G++ + + + + Y I + + +A E G L
Sbjct: 186 TSAYHMPRAMGWFEKEGLHPVPAPTYHQASLQNQDYFGIFSADALRKSTIAFHELFGSLW 245
Query: 236 AYYRG 240
+G
Sbjct: 246 QKVKG 250
>gi|256159910|ref|ZP_05457632.1| hypothetical protein BcetM4_13019 [Brucella ceti M490/95/1]
gi|256255144|ref|ZP_05460680.1| hypothetical protein BcetB_12801 [Brucella ceti B1/94]
gi|261222341|ref|ZP_05936622.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265998306|ref|ZP_06110863.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260920925|gb|EEX87578.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262552774|gb|EEZ08764.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 264
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAVWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 75 LPQH---VDGIIVLGGYMNGEIVAGRQNFELN-SAADRIVETMRLARLYPDAKILVSG-- 128
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ LL+ G + E +S +T +NA FS ++ + G+ +L
Sbjct: 129 GEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ R+ F+ G + A DY + + +AL+E+ G+
Sbjct: 189 VTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGL 248
Query: 234 LIAYYRG 240
++ G
Sbjct: 249 AAYWWTG 255
>gi|261211840|ref|ZP_05926127.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC341]
gi|260839190|gb|EEX65822.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC341]
Length = 273
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 100/244 (40%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L + + + T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFLPVE- 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG + IP E + + R+ E +R+ + + + G
Sbjct: 77 --GTLDYVMVLGNGHVVDDDIP-PTSELTRAALMRLTEGIRISRMYPGSKLILS-----G 128
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ + ++LV+S
Sbjct: 129 YAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQKR---MVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G+L
Sbjct: 186 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIVQPWDKYIPKSRYLEQTEQYWYETLGLLW 245
Query: 236 AYYR 239
R
Sbjct: 246 QKLR 249
>gi|296158762|ref|ZP_06841591.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
gi|295890967|gb|EFG70756.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
Length = 262
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 10/243 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + L + L ++ R + + + GW +P LL Q +Q +P
Sbjct: 25 ILFTLLALFFAAIVLWKRARRPLAVCTAALFWLLAAGWLTVP--LLHLAQPRWQ--TDTP 80
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I++LG GT + P +RI + + Y +CK+ + C +I+SG
Sbjct: 81 ARFAPRTAIIMLGGGTVYDDDH---VLVPPRDVLARIMASAQNYAACKRAAAICHVIVSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE S T++NA+ S++++ + ++IL++
Sbjct: 138 GNPQRHRATEADTYLPYLLRQQVPRADIVLENSSRTTYENARNVSAVLEGSRYDSLILIT 197
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
SAY + R+ L F FG+ + S+ A+ ++P N E+AL E IGI +
Sbjct: 198 SAYQMPRAMLDFHRFGLAPQPMISNARRAHLGVLPRYDNLVSAEIALHELIGIAQFHVYR 257
Query: 238 YRG 240
G
Sbjct: 258 AIG 260
>gi|161619130|ref|YP_001593017.1| hypothetical protein BCAN_A1197 [Brucella canis ATCC 23365]
gi|260566292|ref|ZP_05836762.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|161335941|gb|ABX62246.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|260155810|gb|EEW90890.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 264
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 98/247 (39%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVVIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 75 LPQH---VDGIIVLGGYMNGEIVAGRQNFELN-SAADRIVETMRLARLYPDAKILVSG-- 128
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ LL+ G + E +S +T +NA FS ++ + G+ +L
Sbjct: 129 GEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ R+ F+ G + A DY + + +AL+E+ G+
Sbjct: 189 VTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGL 248
Query: 234 LIAYYRG 240
++ G
Sbjct: 249 AAYWWTG 255
>gi|17987093|ref|NP_539727.1| hypothetical protein BMEI0810 [Brucella melitensis bv. 1 str. 16M]
gi|163843442|ref|YP_001627846.1| hypothetical protein BSUIS_A1225 [Brucella suis ATCC 23445]
gi|189024327|ref|YP_001935095.1| hypothetical protein BAbS19_I11160 [Brucella abortus S19]
gi|225852674|ref|YP_002732907.1| hypothetical protein BMEA_A1222 [Brucella melitensis ATCC 23457]
gi|254689399|ref|ZP_05152653.1| hypothetical protein Babob68_04337 [Brucella abortus bv. 6 str.
870]
gi|254693883|ref|ZP_05155711.1| hypothetical protein Babob3T_04332 [Brucella abortus bv. 3 str.
Tulya]
gi|254697533|ref|ZP_05159361.1| hypothetical protein Babob28_07456 [Brucella abortus bv. 2 str.
86/8/59]
gi|254701918|ref|ZP_05163746.1| hypothetical protein Bsuib55_13827 [Brucella suis bv. 5 str. 513]
gi|254704463|ref|ZP_05166291.1| hypothetical protein Bsuib36_11145 [Brucella suis bv. 3 str. 686]
gi|254710250|ref|ZP_05172061.1| hypothetical protein BpinB_08247 [Brucella pinnipedialis B2/94]
gi|254714246|ref|ZP_05176057.1| hypothetical protein BcetM6_13021 [Brucella ceti M644/93/1]
gi|254717682|ref|ZP_05179493.1| hypothetical protein BcetM_15020 [Brucella ceti M13/05/1]
gi|254730428|ref|ZP_05189006.1| hypothetical protein Babob42_04352 [Brucella abortus bv. 4 str.
292]
gi|256031744|ref|ZP_05445358.1| hypothetical protein BpinM2_14019 [Brucella pinnipedialis
M292/94/1]
gi|256044830|ref|ZP_05447734.1| hypothetical protein Bmelb1R_10074 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113736|ref|ZP_05454540.1| hypothetical protein Bmelb3E_13258 [Brucella melitensis bv. 3 str.
Ether]
gi|256257645|ref|ZP_05463181.1| hypothetical protein Babob9C_09914 [Brucella abortus bv. 9 str.
C68]
gi|256263835|ref|ZP_05466367.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260168877|ref|ZP_05755688.1| hypothetical protein BruF5_11021 [Brucella sp. F5/99]
gi|260546638|ref|ZP_05822377.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260565570|ref|ZP_05836054.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260754918|ref|ZP_05867266.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758135|ref|ZP_05870483.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761961|ref|ZP_05874304.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883930|ref|ZP_05895544.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214170|ref|ZP_05928451.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261219524|ref|ZP_05933805.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261317810|ref|ZP_05957007.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322019|ref|ZP_05961216.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261752483|ref|ZP_05996192.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755142|ref|ZP_05998851.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261758366|ref|ZP_06002075.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265988841|ref|ZP_06101398.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265991256|ref|ZP_06103813.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995092|ref|ZP_06107649.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17982753|gb|AAL51991.1| putative membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|163674165|gb|ABY38276.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
gi|189019899|gb|ACD72621.1| Protein of unknown function DUF218 [Brucella abortus S19]
gi|225641039|gb|ACO00953.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|260095688|gb|EEW79565.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260151638|gb|EEW86732.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260668453|gb|EEX55393.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672393|gb|EEX59214.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675026|gb|EEX61847.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873458|gb|EEX80527.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915777|gb|EEX82638.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260924613|gb|EEX91181.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294709|gb|EEX98205.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297033|gb|EEY00530.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738350|gb|EEY26346.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261742236|gb|EEY30162.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261744895|gb|EEY32821.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262766205|gb|EEZ11994.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002040|gb|EEZ14615.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093964|gb|EEZ17898.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264661038|gb|EEZ31299.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|326409195|gb|ADZ66260.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538905|gb|ADZ87120.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 264
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 75 LPQH---VDGIIVLGGYMNGEIVAGRQNFELN-SAADRIVETMRLARLYPDAKILVSG-- 128
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ LL+ G + E +S +T +NA FS ++ + G+ +L
Sbjct: 129 GEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ R+ F+ G + A DY + + +AL+E+ G+
Sbjct: 189 VTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGL 248
Query: 234 LIAYYRG 240
++ G
Sbjct: 249 AAYWWTG 255
>gi|258627463|ref|ZP_05722244.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580269|gb|EEW05237.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 287
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 19/245 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ ++ + + + F LF + + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSFTGLF-LVSFQPVATRLLMPLERTYTAFLPVE 85
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LGNG + IP E S + R+ E +R+ + M +
Sbjct: 86 ---GTVDYIMVLGNGHVVDDDIP-PTSELSRAALMRLTEGIRISRMYPGSKMILS----- 136
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + + L GV + DI L + DT++ A+ +++ ++ + ++LV+
Sbjct: 137 GYAGGSEFSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQKR---MVLVT 193
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+KR+ F+ G+ + ++YL + IP + TE E +G+L
Sbjct: 194 SASHMKRAMREFESAGLTPIPAPTNYLGHLNIAQPWDKYIPKARYLEQTEQYWYETLGLL 253
Query: 235 IAYYR 239
R
Sbjct: 254 WQKLR 258
>gi|167836831|ref|ZP_02463714.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis MSMB43]
Length = 240
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ L I G + L+ + RP+ P
Sbjct: 2 ILFNSFGLLFVVFLLCRKRRAAFAILAAGAALLWLIASGWLAAPLVALAEAG-VRPVAHP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D IV+LG G P + +RI +T LY +C++ + CT+++SG
Sbjct: 61 AMTGDTT-IVMLGAGIRRRDGAA----VPPRDALARIDKTAELYSACQRTAKRCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+ E+ Y LL GV D+ E S T++NA+F+ +++ ++ILV+
Sbjct: 116 GDPQMRGITEADTYAPYLLARGVAHADLIRERSSHTTYENARFTVPILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FGI + ++ +A +P +AN ELAL E +G+ +
Sbjct: 176 SSYQMKRALLDFERFGIVPQPVYANRRDAQLGWLPRAANLVNAELALHEIVGVAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|17229959|ref|NP_486507.1| hypothetical protein alr2467 [Nostoc sp. PCC 7120]
gi|17131559|dbj|BAB74166.1| alr2467 [Nostoc sp. PCC 7120]
Length = 263
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/252 (21%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L+V+ L + ++ + L + L++ L++ L
Sbjct: 18 LASVGLVVALVTLRKRPRIATTAIALSLTLLLLCSNAWVAKYLVRSLEWQ----NLPMAQ 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I++LG T P + R+ +LY+ K + + D
Sbjct: 74 LPNAEAIIVLGGATKS--VFPPRITPDLSEQGDRVIYAAQLYRQNKAPLIILSG--GRID 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ G +ES N L G+ + E SL+T+QNA ++ + ++LV+SA
Sbjct: 130 WRGSGSSESTDMANILTSLGIPASVLIEEPDSLNTYQNAVNVKKILVSRGIDQVLLVTSA 189
Query: 183 YHLKRSQLYFQHFGINTKASCSDY--------------LNAYYSIIPLSANFYLTELALK 228
H+ RS FQ G+N + +D+ A +++P + N +L ALK
Sbjct: 190 LHMPRSLKIFQRQGMNVIPAPTDFLVSEGELQELGNTPKAAILNLLPDTYNLHLFTNALK 249
Query: 229 EYIGILIAYYRG 240
EY+G + + RG
Sbjct: 250 EYVGSFVYWLRG 261
>gi|75906624|ref|YP_320920.1| hypothetical protein Ava_0399 [Anabaena variabilis ATCC 29413]
gi|75700349|gb|ABA20025.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 263
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 22/252 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L+V+ L + ++ + L + L++ L++ L P
Sbjct: 18 LASVSLVVALVTLRKRPRIATTAIALSLTLLLLCSNAWVAKYLVRSLEWQ----NLPPAQ 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I++LG T P + R+ +LY+ K + + D
Sbjct: 74 LPNAEAIIVLGGATKS--VFPPRITPDLSEQGDRVIYAAQLYRQNKAPLIILSG--GRID 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ G +ES N L G+ + E SL+T+QNA ++ + ++LV+SA
Sbjct: 130 WRGSGSSESTDMANILTSLGIPASVLIEEPDSLNTYQNAVNVKKILASRGIDKVLLVTSA 189
Query: 183 YHLKRSQLYFQHFGINTKASCSDY--------------LNAYYSIIPLSANFYLTELALK 228
H+ RS FQ G+N + +D+ A +++P + N +L ALK
Sbjct: 190 LHMPRSLKIFQRQGMNVIPAPTDFLVSAGELQELGNTPKAAILNLLPDTYNLHLFTNALK 249
Query: 229 EYIGILIAYYRG 240
EY+G I + RG
Sbjct: 250 EYVGSFIYWLRG 261
>gi|300865598|ref|ZP_07110374.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336399|emb|CBN55524.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 236
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 58/241 (24%), Positives = 92/241 (38%), Gaps = 23/241 (9%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ M+ + + + G I L++ L+ L P IV+LG
Sbjct: 2 FWKRPRWAAGAMALALTILLTLSNGWIAQNLVRSLETQ----NLPPTPIPQTRAIVVLGG 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G P +P ++ RI +LY+ K + + + + G ES
Sbjct: 58 GIK--PALPPRPWVEVGEAGDRILYGSQLYRQGKAPWLILSG--GRVEWKGGGPPESADM 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKRSQLYFQ 193
GV I + SL+T+QNA + N I+LV+SA H+ RS L FQ
Sbjct: 114 AEIAQAMGVPTSAILQDPTSLNTYQNAVNVRKILKDNNILGPILLVTSALHMPRSLLIFQ 173
Query: 194 HFGINTKASCSDYLNAYYS--------------IIPLSANFYLTELALKEYIGILIAYYR 239
GI T + +D+ ++P + N + ALKEYIG+ + R
Sbjct: 174 RQGIETIPAPTDFSITQQDMEASQSSFQAVLLNLLPDAYNLQQSTKALKEYIGLAVYRLR 233
Query: 240 G 240
G
Sbjct: 234 G 234
>gi|254719238|ref|ZP_05181049.1| hypothetical protein Bru83_06801 [Brucella sp. 83/13]
gi|265984234|ref|ZP_06096969.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837987|ref|ZP_07470845.1| Hypothetical protein BROD_0794 [Brucella sp. NF 2653]
gi|264662826|gb|EEZ33087.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306406911|gb|EFM63132.1| Hypothetical protein BROD_0794 [Brucella sp. NF 2653]
Length = 264
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 75 LPQH---VDGIIVLGGYMNGEIVAGRQNFELN-SAADRIVETMRLARLYPDAKILVSG-- 128
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ LL+ G D E +S +T +NA FS ++ + G+ +L
Sbjct: 129 GEGTFFEKSAREAETTRALLLDLGFSGDRYIFEGKSRNTVENAIFSQALAQPKPGETWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ R+ F+ G + A DY + + +AL+E+ G+
Sbjct: 189 VTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGL 248
Query: 234 LIAYYRG 240
++ G
Sbjct: 249 TAYWWTG 255
>gi|186476497|ref|YP_001857967.1| hypothetical protein Bphy_1739 [Burkholderia phymatum STM815]
gi|184192956|gb|ACC70921.1| protein of unknown function DUF218 [Burkholderia phymatum STM815]
Length = 228
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 9/224 (4%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR--PLLSPQWKKDGNIIVLLGNGT 76
+ + ++LF +G G + LL Q ++P IVLLG GT
Sbjct: 4 RNARTLIGTTTIVLFWAVGAGWLAQPLLDLAQRGAPPGGQTVAPATYAAHTAIVLLGTGT 63
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
++ P + +RI + LY CKQ S C +I+SGG+PQ+H E+ Y
Sbjct: 64 VHRD----GKLVPPRDAIARIAMSADLYARCKQVSSVCHVIVSGGNPQEHEATEADTYLP 119
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
LL V R DI LE +S+ T++NA+ ++++ + +++LV+SAY + R+ L F FG
Sbjct: 120 YLLREEVPRGDIILENRSMTTYENARNVAAILPDGYYGSLMLVTSAYQMPRALLNFHRFG 179
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
+N S+ +A ++P NF+ E+AL E +GI +
Sbjct: 180 MNPLPVVSNTRHAKRGVLPRRENFFDAEIALHELVGIAQFHVYR 223
>gi|262165878|ref|ZP_06033615.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus VM223]
gi|262025594|gb|EEY44262.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus VM223]
Length = 278
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L + + + T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFLPVE- 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LG+G + IP E S + R+ E +R+ + M + G
Sbjct: 77 --GSIDYVMILGSGHVVDDDIP-PTSELSRAALMRLTEGIRISRMYPGSKMILS-----G 128
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + + L GV + DI L + DT++ A+ +++ ++ ++LV+S
Sbjct: 129 YAGGSEFSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQK---RMVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP + TE E +G+L
Sbjct: 186 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIAQPWDKYIPKARYLEQTEQYWYETLGLLW 245
Query: 236 AYYR 239
R
Sbjct: 246 QKLR 249
>gi|15964004|ref|NP_384357.1| hypothetical protein SMc00331 [Sinorhizobium meliloti 1021]
gi|15073180|emb|CAC41688.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
Length = 335
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 12/244 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCF-MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ L+V +L + R +S F + + + + L+ L+ + RP P
Sbjct: 90 LAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILEDRFPRPTPEPT 149
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
I++LG + +E + Q+ R ET+RL ++ Q + + G
Sbjct: 150 ELA---CIIVLGGAFENVVMASRGGMELN-QAAERFVETLRLAQAYPQARILVSG--GDG 203
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ N G+ D + E +S TF+NA+++ ++ + LV+S
Sbjct: 204 SLSGIYEGDAHASENFFGTFGIGSDRLIREGESRTTFENARYTRDLLAKNGLERCALVTS 263
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
AYH+ RS F+ G+ +DY + + S N L A KE+ G++
Sbjct: 264 AYHMPRSIGLFRANGMEVTPWPTDYRTSGKVRLGFDFTQPSLNAQLATTAAKEWTGLVAY 323
Query: 237 YYRG 240
Y G
Sbjct: 324 YLLG 327
>gi|256061258|ref|ZP_05451408.1| hypothetical protein Bneo5_12948 [Brucella neotomae 5K33]
gi|261325265|ref|ZP_05964462.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261301245|gb|EEY04742.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 264
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 75 LPQH---VDGIIMLGGYMNGEIVAGRQNFELN-SAADRIVETMRLARLYPDAKILVSG-- 128
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ LL+ G + E +S +T +NA FS ++ + G+ +L
Sbjct: 129 GEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ R+ F+ G + A DY + + +AL+E+ G+
Sbjct: 189 VTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGL 248
Query: 234 LIAYYRG 240
++ G
Sbjct: 249 AAYWWTG 255
>gi|269102447|ref|ZP_06155144.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162345|gb|EEZ40841.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 278
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 96/247 (38%), Gaps = 20/247 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF--FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ I + + L + + F++ +L + + I T LL+ L+ +
Sbjct: 15 LPALLIIGFIGLYLLWFTRRKGLAGGFITASLLGILLLSFQPISTSLLRPLEKQNAPFIP 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
N +++LG G I P I + S + R+ E +R+Y+ + +
Sbjct: 75 HS---TPVNYVMVLGAGHVIDNAFP-ITSQLSRAALMRLVEGIRIYRMYPGSKLILS--- 127
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G ++ + + L V + DI L + DT++ A ++S++ + L
Sbjct: 128 --GYGGGSDISHARMMAKVALALDVNKADILLLETAKDTWEEAFQAASVVGDKNLV---L 182
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIG 232
V+SA H+ R+ F G+N + +++L + P S +E E +G
Sbjct: 183 VTSASHMSRALYEFHQAGLNPIPAPTNFLASNKIEQPWVRYAPSSKYLEQSERYWHERMG 242
Query: 233 ILIAYYR 239
+ R
Sbjct: 243 QIWQRLR 249
>gi|317064197|ref|ZP_07928682.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313689873|gb|EFS26708.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 241
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 17/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ IF+ + ++L + I+ F + + L L+ Y +S
Sbjct: 5 LPFILIFIYIGLKNILNRRIKSGFLLIFIGVGTYLGTSDFFVDRFLFKLESEYS--TIST 62
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++G++ +LLG G A PS + +RI +T + Y + I ISG
Sbjct: 63 VKLQEGDVYILLGGGIVPN---SAGGNVPSEGANARIIKTAQFYNKYPK-----KIYISG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P ++ +ES VY +L+ G+ ++I +E +S +T +NA + M++ + K +L++
Sbjct: 115 GSPLQNKESESSVYKRELVALGIPSENIVIEEKSRNTRENALYIRKMMEGSKEKKAVLIT 174
Query: 181 SAYHLKRSQLYFQH--FGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGI 233
SA+H+ RS F G+ + D++ ++ IP NF + LKEYIG+
Sbjct: 175 SAFHIPRSVKTFDDGEGGLIFYPAPCDFMAKKEAENFFDYIPEYTNFKKLGILLKEYIGM 234
Query: 234 LIAYYR 239
L R
Sbjct: 235 LYYRIR 240
>gi|114776481|ref|ZP_01451526.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
gi|114553311|gb|EAU55709.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
Length = 257
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 83/242 (34%), Gaps = 12/242 (4%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
I L + +S + + L + + +LL L+ Y +S +
Sbjct: 18 GLIVLAATGLVFWKRSWGRAIVILALAL-LWLLSTAPVRDLLLNPLEQRYPALDISQLQQ 76
Query: 64 KDGN--IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV+LG G + R L G
Sbjct: 77 MKADDSAIVVLGGGLYPRAPEYGGQDSLHDDGLMRTLYAADLALKSNLDVYATGGAFKPG 136
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ GL + L+ GV+ + I E ++ T++N + M+K IILV++
Sbjct: 137 QAEPEGL----IMARMLIRFGVDPEHIHSENRARTTWENGLYIRDMMKKAGIHRIILVTT 192
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIA 236
A+H+ RS F+ G++ A+ Y S +P + L EY+G+L
Sbjct: 193 AWHMPRSVRVFESLGMHVIAAPCSYRAGRQAYDLRSYLPRWNVLSDSGDGLHEYLGLLWY 252
Query: 237 YY 238
Sbjct: 253 RL 254
>gi|90413116|ref|ZP_01221113.1| hypothetical protein P3TCK_00775 [Photobacterium profundum 3TCK]
gi|90325959|gb|EAS42405.1| hypothetical protein P3TCK_00775 [Photobacterium profundum 3TCK]
Length = 284
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/245 (22%), Positives = 104/245 (42%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L +I L++ W + + F F+ +F + + I T LL+ L+ Q + S
Sbjct: 19 LILGFIGLLI-LWFTRRKGLASCFIAFAFLGIFM-VAFQPIATSLLRPLETENQPFVPSS 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G I +P I E S + R+ E MR+Y+ + +
Sbjct: 77 ---TPVDYIMVLGSGHVIDKAMP-ITSELSRTALMRLSEGMRIYRLFPGAKLILS----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++++ + L GV + DI L + DT++ A ++S++ N LV+
Sbjct: 128 GYGGGSDISQARMMAKVALALGVNKSDILLLETARDTWEEAFQAASVVGNKNLV---LVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+ + +++ + P + TE E +G +
Sbjct: 185 SASHMTRALYEFNQAGLTPTPAPTNFLASNKIKQPWDRYAPKAKYLEQTERYWHETMGQI 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQRIR 249
>gi|332528861|ref|ZP_08404835.1| hypothetical protein HGR_03097 [Hylemonella gracilis ATCC 19624]
gi|332041720|gb|EGI78072.1| hypothetical protein HGR_03097 [Hylemonella gracilis ATCC 19624]
Length = 255
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/244 (21%), Positives = 97/244 (39%), Gaps = 9/244 (3%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI--GWGIIPTILLKHLQFSYQRPLLS 59
L+W+ ++ LL + R+ + L + GW +P +L+ L+ P
Sbjct: 14 PLAWVVALLFVGLLLQRRWRRTGQGLLWAALLVLLLQGWEPLPDAVLRQLEAQQPAP--D 71
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P +++LG T + R+ + L + + + T
Sbjct: 72 PLDLSRYAGVIVLGGSTESSYVWEGHAQPALNSAAERLTAALPLLQREPRLVLLYTG--G 129
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G+ G +E+ +E GV + LE+ S +T NA FS+++ + + +L+
Sbjct: 130 EGELLASGPSEAERARRFYVEQGVPPARLLLESASRNTHDNAVFSAALPGVDRTRPWLLI 189
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL---NAYYSIIPLSANFYLTELALKEYIGILIA 236
+SA+H+ RS F+ G N +DY + LS +LAL E +G+
Sbjct: 190 TSAWHMPRSLRTFRKAGWNVTPWPTDYRAGLTTPWHQYSLSQGAAKWQLALHELLGLAAY 249
Query: 237 YYRG 240
RG
Sbjct: 250 RLRG 253
>gi|218531176|ref|YP_002421992.1| hypothetical protein Mchl_3226 [Methylobacterium chloromethanicum
CM4]
gi|218523479|gb|ACK84064.1| protein of unknown function DUF218 [Methylobacterium
chloromethanicum CM4]
Length = 265
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/223 (20%), Positives = 87/223 (39%), Gaps = 11/223 (4%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ G + L L+ + IV+LG +I
Sbjct: 40 RVLTVAGFVGLLVAGLSPLSAWTLAPLENRFPSFT---DDGTPVTGIVVLGGTVEADTSI 96
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+I + ++ R L + Q + + G ++ ++E+ + + G
Sbjct: 97 GRDQITVN-EAGERAIALADLARRYPQARLVFSG--GSGSTREDAVSEAEIVSRYADTLG 153
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V R+ + LE QS +T +NA FS+ M++ G+ +LV+SA+H+ RS F+ G + A
Sbjct: 154 VPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRKAGFDVTAY 213
Query: 203 CSDYLNAYYSIIPL-----SANFYLTELALKEYIGILIAYYRG 240
DY + S ++ +KE+IG++ G
Sbjct: 214 PVDYRTNWPRDAYRLASFASDGLGELDIGVKEWIGMIAYRLTG 256
>gi|241668569|ref|ZP_04756147.1| hypothetical protein FphipA2_07371 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 239
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 14/236 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++F I+ + + +F+ +++ +G G+I IL K + + +
Sbjct: 15 IGFLFFIILIIVCIFATGYLRYFVIIVTIIYYLVGNGLIANILAKPI----RLESTDIKQ 70
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I+LLG G ++EPS +Y RI +T +Y Q IIISGG
Sbjct: 71 CANTKAIILLGAGIN----QAFDKLEPSLSAYDRILKTAEVYNQYPQD-----IIISGGS 121
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P + L+E+ VY + L + G+ + I+LE QS +T++NAQF+ ++ + L++
Sbjct: 122 PSGYKLSEAEVYADILYKLGIPKSKIRLEKQSKNTYENAQFTKKILSDHNNTYC-LITGG 180
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H +R++L F F INT S L S +P + +FY+T+ + EY+GI+ Y
Sbjct: 181 IHYQRAKLIFDSFNINTINIASSKLAPEISFLPSAYSFYITQAIIHEYLGIIKFYL 236
>gi|254562167|ref|YP_003069262.1| hypothetical protein METDI3773 [Methylobacterium extorquens DM4]
gi|254269445|emb|CAX25411.1| conserved hypothetical protein, DUF218; putative membrane protein
precursor [Methylobacterium extorquens DM4]
Length = 265
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 12/228 (5%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ I ++ ++ F+ L G + L L+ + IV+LG
Sbjct: 36 RGIGRVLTIASFVGLL-VAGLSPLSAWTLAPLENRFPSFT---DDGTPVTGIVVLGGTVE 91
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+I +I + ++ R L + Q + + G ++ ++E+ + +
Sbjct: 92 ADTSIGRDQITVN-EAGERAIALADLARRYPQARLVFSG--GAGSTREDAVSEAEIVSRY 148
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
GV R+ + LE QS +T +NA FS+ M++ G+ +LV+SA+H+ RS F+ G
Sbjct: 149 ADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRKAGF 208
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLT-----ELALKEYIGILIAYYRG 240
+ A DY + A+F T ++ +KE+IG++ G
Sbjct: 209 DVTAYPVDYRTNWPRDAYRLASFASTGLGELDIGVKEWIGMIAYRLTG 256
>gi|240139755|ref|YP_002964232.1| hypothetical protein MexAM1_META1p3209 [Methylobacterium extorquens
AM1]
gi|240009729|gb|ACS40955.1| conserved hypothetical protein, DUF218; putative membrane protein
precursor [Methylobacterium extorquens AM1]
Length = 265
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 12/228 (5%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ I ++ ++ F+ L F G + L L+ + IV+LG
Sbjct: 36 RGIGRVLTVASFVGLL-FGGLSPLSAWTLAPLENRFPNF---IDDGTPVTGIVVLGGTVE 91
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+I +I + ++ R L + Q + + G ++ ++E+ + +
Sbjct: 92 ADTSIGRDQITVN-EAGERAIALADLARRYPQARLVFSG--GAGSTREDAVSEAEIVSRY 148
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
GV R+ + LE QS +T +NA FS+ M++ G+ +LV+SA+H+ RS F+ G
Sbjct: 149 ADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRKAGF 208
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLT-----ELALKEYIGILIAYYRG 240
+ A DY + A+F T ++ +KE+IG++ G
Sbjct: 209 DVTAYPVDYRTNWPRDAYRLASFASTGLGELDIGVKEWIGMIAYRLTG 256
>gi|307306416|ref|ZP_07586160.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|306902258|gb|EFN32855.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 262
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 12/244 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCF-MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ L+V +L + R +S F + + + + L+ L+ + RP P
Sbjct: 17 LAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILEDRFPRPTPEPT 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
I++LG + +E + Q+ R ET+RL ++ Q + + G
Sbjct: 77 ELA---CIIVLGGAFENVVMASRGGMELN-QAAERFVETLRLAQAYPQARILVSG--GDG 130
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ N G+ D + E +S TF+NA+++ ++ + LV+S
Sbjct: 131 SLSGIYEGDAHASENFFGTFGIGSDRLIREGESRTTFENARYTRDLLAKNGLERCALVTS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
AYH+ RS F+ G+ +DY + + S N L A KE+ G++
Sbjct: 191 AYHMPRSIGLFRANGMEVTPWPTDYRTSGKVRLGFDFTQPSLNAQLATTAAKEWTGLVAY 250
Query: 237 YYRG 240
Y G
Sbjct: 251 YLLG 254
>gi|167628013|ref|YP_001678513.1| hypothetical protein Fphi_1785 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167598014|gb|ABZ88012.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 231
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 68/237 (28%), Positives = 119/237 (50%), Gaps = 14/237 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++F I+ + + +F+ +++ +G G+I IL K + + +
Sbjct: 7 IGFLFFIILIIVCIFATGYLRYFVIIVTIIYYLVGNGVIGNILAKPI----RLESTDIKQ 62
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I+LLG G ++EPS +Y RI +T +Y Q IIISGG
Sbjct: 63 CANTKAIILLGAGIN----QAFDKLEPSLSAYDRILKTAEVYNQYPQD-----IIISGGS 113
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P + L+E+ VY + L + G+ + I+LE QS +T++NAQF+ +++ + L++
Sbjct: 114 PSGYKLSEAEVYADILYKLGIPKSKIRLEKQSKNTYENAQFTKNILSDHNNTYC-LITGG 172
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H +R++L F F INT S L S +P + NFY+T+ + EY+GI+ Y
Sbjct: 173 IHYQRAKLIFDSFNINTINIASSKLAPEISFLPSAYNFYITQAIIHEYLGIVKFYLT 229
>gi|317968461|ref|ZP_07969851.1| hypothetical protein SCB02_02886 [Synechococcus sp. CB0205]
Length = 266
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 87/238 (36%), Gaps = 18/238 (7%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + + I L+ L+ L+P+ + + +V+LG G
Sbjct: 31 RRPRLSRALGASGIAMVWLFAMPITSRQLIWGLEERAA--ALTPKTIPNADAVVVLGGGL 88
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P +P R + R+ +RL K ++ + AE+
Sbjct: 89 K--PALPPRRGVEVSEGGDRLLTGVRLMSQKKAGTLVTSGAQISFTAADPAPAEAFSAKA 146
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-QHF 195
E GV I S T + A+ + K ++LV+SA+H+ RS F +
Sbjct: 147 LAEELGVPSQRIVPNPLSKTTAEEARDIGQLAKQRGWSQVLLVTSAFHMPRSLATFQRRS 206
Query: 196 GINTKASCSDYLNAYY-------------SIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ D+L ++P + YL+ +ALKE++G+ + +G
Sbjct: 207 GLQVIPVACDFLLPERQRLGSPTPGSLVQDLLPSAEALYLSSVALKEHLGLALYRLKG 264
>gi|153832463|ref|ZP_01985130.1| integral membrane protein [Vibrio harveyi HY01]
gi|148871258|gb|EDL70130.1| integral membrane protein [Vibrio harveyi HY01]
Length = 268
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 94/230 (40%), Gaps = 18/230 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ F + + + + + T LL L+ Y+ L + +++LGNG
Sbjct: 34 KRKTGCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFLPVS---GTVDYVMVLGNGHV 90
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ IP + S + R+ E +R+ + + + G ++ + + N
Sbjct: 91 VDNEIP-PTSQLSRTALMRLTEGIRILRMYPGAKLILS-----GYAGGSEISHARMMANV 144
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L GV + DI L + DT++ A+ +++ +K LV+SA H+KR+ F GI
Sbjct: 145 ALSLGVAKSDIILLEDAKDTWEEARQAAAFVKQKDIV---LVTSASHMKRALYEFNAAGI 201
Query: 198 NTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ ++++ + P + TEL EY+G L R N
Sbjct: 202 KPIPAPTNFMAIDDIEQPWQKYAPKARYLEQTELYWHEYLGGLWQKLRDN 251
>gi|255019747|ref|ZP_05291824.1| hypothetical protein ACA_2404 [Acidithiobacillus caldus ATCC 51756]
gi|254970815|gb|EET28300.1| hypothetical protein ACA_2404 [Acidithiobacillus caldus ATCC 51756]
Length = 267
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 86/221 (38%), Gaps = 15/221 (6%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ + G+ L+ L+ Y L + IV+LG G P
Sbjct: 42 SLLLAAGVGLYLSATGVGARWLVLPLENRYPPLLH---PQPGVGAIVVLGGGEVARPPGD 98
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ + ++ R+ +L K I+ SGG P+ E+ L ES
Sbjct: 99 GGDMA-NARTLMRLEAAAKLAKQ-----SALPIVTSGGAPRFGAPPEATTMARLLRESFA 152
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ I +E +S +T NA SS ++ + LV+SA H+ R+ +F+ G++
Sbjct: 153 VHNPIWIEGRSFNTAANAFDSSKLLAQKGIHRVYLVTSALHMPRAMAWFRRAGLDPVPVP 212
Query: 204 SDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
DY + Y S +P + + A+ EY+G+ +
Sbjct: 213 CDYRLDRGLTSGYESWLPRAIYLEASSEAIHEYLGLFWLHL 253
>gi|330829535|ref|YP_004392487.1| integral membrane protein [Aeromonas veronii B565]
gi|328804671|gb|AEB49870.1| Integral membrane protein [Aeromonas veronii B565]
Length = 256
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 19/235 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K+ + +L+ + +G + L + L+ ++ S + IV+L
Sbjct: 30 WFTRFQKTGKL-LATLSLLIVALMGMRPVSYELARGLEQTFPPFEAS--QHPNIEAIVVL 86
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
GNG P +P + + S +R E +RL ++ ++ G L+ +
Sbjct: 87 GNGHVSDPAVPMRSWQ-NNISLARTLEGVRLAQAYPDAE-----LVFSGYVSGDTLSNAE 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V G+ R + L + DT + S+ ++++GK + LVSSA HL R+ +
Sbjct: 141 VNARMAESLGIPRSRMTLFENNKDTHDE---AVSISRHLKGKEVALVSSATHLPRAMALY 197
Query: 193 QHFGINTKASCSDY-------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Q G+ + +DY YS +P +E A+ E+IG+ A RG
Sbjct: 198 QGQGLKAVPAPTDYTAKQSQVPQPLYSYLPKGRYLMYSEAAIHEWIGVWWARLRG 252
>gi|182678647|ref|YP_001832793.1| hypothetical protein Bind_1673 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634530|gb|ACB95304.1| protein of unknown function DUF218 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 284
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 11/219 (5%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+ +LL +F+ +++ L+ + P L I++LG G +
Sbjct: 43 AIAILLLAFVLLTPFGAFVVRPLEDRFPNPDLHAIDPAG---IIVLGGGMDSRESKARG- 98
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ + SR+ + L + Q + T GD +ESI GV +
Sbjct: 99 VPILNTAGSRMTAGVELSRLFPQAKLIFTG--GSGDLMGDQPSESIYARELWQNLGVPAE 156
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ E S +T++NA F+ +IK +LV+SA H+ RS F+ G N ++Y
Sbjct: 157 QMVFEGNSRNTWENAVFTRDLIKPKPEDRYLLVTSAAHMPRSVGIFRKVGFNVIPYNANY 216
Query: 207 LNAY----YSIIPLS-ANFYLTELALKEYIGILIAYYRG 240
+ +S+ L+ + L+E+IG+L G
Sbjct: 217 MTIGDARDWSVTTLAHDRLRMLSFGLREWIGLLAYRLTG 255
>gi|307319303|ref|ZP_07598732.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306895139|gb|EFN25896.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
Length = 262
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 12/244 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCF-MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ L+V +L + R +S F + + + + L+ L+ + RP P
Sbjct: 17 LAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILEDRFPRPTPEPT 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
I++LG + +E + Q+ R ET+RL ++ Q + + G
Sbjct: 77 ELA---CIIVLGGAFENVVMASRGGMELN-QAAERFVETLRLAQAYPQARILVSG--GDG 130
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ N G+ D + +S TF+NA+++ ++ + LV+S
Sbjct: 131 SLSGIYEGDAHASENFFGTFGIGSDRLIRAGESRTTFENARYTRDLLAKNGLERCALVTS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
AYH+ RS F+ G+ +DY + + S N L A KE+ G++
Sbjct: 191 AYHMPRSIGLFRANGMEVTPWPTDYRTSGKVRLGFDFTQPSLNAQLATTAAKEWTGLVAY 250
Query: 237 YYRG 240
Y G
Sbjct: 251 YLLG 254
>gi|28897807|ref|NP_797412.1| hypothetical protein VP1033 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838515|ref|ZP_01991182.1| integral membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260876969|ref|ZP_05889324.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260898706|ref|ZP_05907202.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260900663|ref|ZP_05909058.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28806020|dbj|BAC59296.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748082|gb|EDM58941.1| integral membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308089504|gb|EFO39199.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308093685|gb|EFO43380.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308106719|gb|EFO44259.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
gi|328473218|gb|EGF44066.1| hypothetical protein VP10329_21110 [Vibrio parahaemolyticus 10329]
Length = 261
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 16 LCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ F+ F + + + + T LL L+ ++ L + +++LGN
Sbjct: 31 FTTKRKTGCFVVLFSFVGLFLVAFQPVSTKLLMPLEREHKAFLPVS---GTIDYVMVLGN 87
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + IP + S + R+ E +R+ + + + G ++ + +
Sbjct: 88 GHVVDDEIP-PTSQLSRAALMRLTEGIRILRMYPGAKLILS-----GYDGGSEISHARMM 141
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
N L GV + DI L + DT++ A+ +++ ++ + LV+SA H+ R+ F
Sbjct: 142 ANVALALGVAKSDIILLEDAKDTWEEARQAAAFVQQKEIV---LVTSASHMSRALYEFNA 198
Query: 195 FGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
GI + +++L + P + TEL EY+G + R
Sbjct: 199 AGIKPIPAPTNFLAIDEVSQPWDKYSPKARYLEQTELFWHEYLGSVWQRLR 249
>gi|295676250|ref|YP_003604774.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
gi|295436093|gb|ADG15263.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
Length = 262
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + L + L ++ R + + GW P + L QR
Sbjct: 25 ILFTLLALFFAAIVLWKRARRPLVICMIALFWLLAAGWLTAPLLDLA----QPQRQSAEA 80
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I+LLG GT + P SRI + + Y +CK+ ++ C +I+SG
Sbjct: 81 ATFAPRTAIILLGGGTIYDHDH---VLVPPRDVLSRIEVSAQNYAACKRTAIVCQVIVSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE S T++NA+ S ++ +ILV+
Sbjct: 138 GNPQRHSATEADTYLPYLLRQQVPRSDIVLEKSSRTTYENARNVSVIVGQSHYDKLILVT 197
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SAYH+ R+ L FQ FG+ + S ++P N E+AL E IG+ +
Sbjct: 198 SAYHMPRALLDFQRFGVEPQPQISSARRVRLGVLPRFGNLVAAEIALHELIGLAQFHL 255
>gi|313672214|ref|YP_004050325.1| hypothetical protein Calni_0249 [Calditerrivibrio nitroreducens DSM
19672]
gi|312938970|gb|ADR18162.1| protein of unknown function DUF218 [Calditerrivibrio nitroreducens
DSM 19672]
Length = 238
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 24/245 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ WIF++ K + + F ++ + IL+ ++ Y
Sbjct: 12 LIPPWIFIVGFILGGYFLKGFKRYLLFFFAVMLYLFSISPVKDILIYPIEKDYINLKC-- 69
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
DG+IIV+LG G E S ++ R+ + K II+SG
Sbjct: 70 ----DGDIIVVLGGGVY-------GNGELSEDAFKRVVKGFE-----KGRGGDKIIIVSG 113
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G + E+ V + L+ G+ +I ++ S DT +NA+F+ +++ K ++IL+
Sbjct: 114 GRVSESYPYEAEVMKDLLVTLGIREGNIIMDKDSKDTVENAKFTKKIVEEKGIKGDVILI 173
Query: 180 SSAYHLKRSQLYFQHFGINTKASCS-----DYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+SAYH+KR L F+ +G + + + D + + Y +P ++N ALKEY+GIL
Sbjct: 174 TSAYHMKRGILIFKKYGFDNICAAATDFKFDGVYSIYDFLPSASNLNTVSKALKEYLGIL 233
Query: 235 IAYYR 239
+
Sbjct: 234 FYRIK 238
>gi|58582596|ref|YP_201612.1| hypothetical protein XOO2973 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427190|gb|AAW76227.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 210
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 117/197 (59%), Gaps = 4/197 (2%)
Query: 42 PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
P+ +L HLQ + N+IVLLG GT A+ E + +Y RI E+
Sbjct: 2 PSWMLHHLQHTGVNDF---NAWGARNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESA 57
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
RLY+ C+ C I ISGGDP+ GL+E++VY L++ + + D+ +E S++T QNA
Sbjct: 58 RLYQQCRHSGGDCKIEISGGDPRGLGLSEAVVYRRVLVDLAIPQADVIMEPSSMNTLQNA 117
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY 221
QFS +++ + I+LVSSA HL R++LYF+HFGI+ +D+L A +SI+P S NF
Sbjct: 118 QFSQPLLRAYRPDRIVLVSSATHLCRAELYFRHFGIDATPVRADWLTATWSILPQSYNFT 177
Query: 222 LTELALKEYIGILIAYY 238
L ++AL EY+G+
Sbjct: 178 LADVALHEYLGMARYRL 194
>gi|319790359|ref|YP_004151992.1| protein of unknown function DUF218 [Thermovibrio ammonificans HB-1]
gi|317114861|gb|ADU97351.1| protein of unknown function DUF218 [Thermovibrio ammonificans HB-1]
Length = 261
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 18/242 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
LS F +++ + FF + + F + LK L+ +Y P LS
Sbjct: 18 LSVTFGVLALLLWFKRRKLAFFFAALSVAFLYFFSTEFGKDLTLKPLEDAYPYPKLSSL- 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G R Q R+ E +L++ K+ I+ +GG
Sbjct: 77 --NCTYIVVLGGGIVPHSPAAGGRATVRPQVAKRLLEAWKLWRVLKK-----PIVATGGV 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +E+ V L GV IK+E +S TF+NA+F+ +I LV+SA
Sbjct: 130 LYPNVESEAAVMARFLEGLGVPASQIKVEGKSRTTFENAEFTYRLIGPQSI---CLVTSA 186
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAY 237
YH+ RS F+ FG +DY + S +P+ T +E++GI
Sbjct: 187 YHMPRSVRIFKSFGFKVTPVPTDYRVNRAGYNWLSFMPIYG--VDTYFGFREWVGIAFFE 244
Query: 238 YR 239
R
Sbjct: 245 LR 246
>gi|220910044|ref|YP_002485355.1| hypothetical protein Cyan7425_4689 [Cyanothece sp. PCC 7425]
gi|219866655|gb|ACL46994.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 262
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 97/251 (38%), Gaps = 21/251 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L V+ + M + L + LL+ L+ P
Sbjct: 18 LACVLLGVAIVCFWKRPRWAAIAMVLSLSLLLIGSNYWVSRWLLQTLETQ-----NLPGS 72
Query: 63 KKDGNIIVLLGNGTTI-IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV+LG P P I + ++ R+ +LY+ K + +
Sbjct: 73 LPNAAAIVVLGGAIKGADPPRPWIEV---AEAGDRLLYAAKLYRDGKAPLVILSGGRISW 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVS 180
ES + GV + ++ SL+T+QNA ++K +I+LV+
Sbjct: 130 LSTATAAPESADMAILIETMGVPASALLQDSTSLNTYQNAVNVQKILKEKNITGSILLVT 189
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAY-----------YSIIPLSANFYLTELALKE 229
SA+H+ R+ F GI A+ +D+ S++P + T LALKE
Sbjct: 190 SAFHMPRALAIFNRLGIPAIAAPTDFHTTQTAELSGAIGFLLSLLPSAETLQNTTLALKE 249
Query: 230 YIGILIAYYRG 240
Y+G+++ RG
Sbjct: 250 YVGLVVYRLRG 260
>gi|188582432|ref|YP_001925877.1| hypothetical protein Mpop_3190 [Methylobacterium populi BJ001]
gi|179345930|gb|ACB81342.1| protein of unknown function DUF218 [Methylobacterium populi BJ001]
Length = 278
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 96/230 (41%), Gaps = 12/230 (5%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +I F+ L + G + +L L+ + ++ IV+LG
Sbjct: 47 FGRGVGRILACVGFLGLLAA-GLSPLSAWVLGPLENRFPAFA---DDERPVAGIVVLGGA 102
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+I +I + + R L + Q + + G ++ ++E+ + +
Sbjct: 103 VEADTSIGRNQITVN-DAGEREIALADLARRFPQARLVFSG--GAGSLREDAVSEAEIVS 159
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
GV R+ + LE QS +T +NA FS+ M++ G+ +LV+SA+H+ R+ F+
Sbjct: 160 RYADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRAVGCFRRA 219
Query: 196 GINTKASCSDYLNAYYSIIPL-----SANFYLTELALKEYIGILIAYYRG 240
G + A DY + S ++ +KE+IG++ G
Sbjct: 220 GFDVTAYPVDYRTNWPRDATRFASFASDGLGELDIGVKEWIGLIAYKLAG 269
>gi|152981868|ref|YP_001355267.1| hypothetical protein mma_3577 [Janthinobacterium sp. Marseille]
gi|151281945|gb|ABR90355.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 258
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 12/229 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ +++ + T+ + L+ P L IV+LG
Sbjct: 32 RPRWPRLGLGLSVLALVVLALCSTRFGATLFISPLEKF--NPPLQLGDASGAQAIVVLGG 89
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G A + PS + R+ LY + H +++SGG P ++E+ V
Sbjct: 90 GRISNALEYAGQDIPSSPTLHRLRYAATLY-----RTTHLPVLVSGGQPDGAAVSEAAVM 144
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L E LE S +T +NAQ S+ M++ K+I+LV+ A H++R++ F
Sbjct: 145 ARVLREDFSVPVR-WLEQASNNTAENAQLSARMLREAGVKHILLVTDAMHMQRAKQVFTQ 203
Query: 195 FGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G+ A+ + + + +P S T AL E++G+ +R
Sbjct: 204 AGLKVVAAPTIFISNARHTPADFLPSSQWLQQTSYALHEWLGLAWYRWR 252
>gi|257469971|ref|ZP_05634063.1| hypothetical protein FulcA4_11568 [Fusobacterium ulcerans ATCC
49185]
Length = 252
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 17/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ IF+ + ++L + I+ F + + L L+ Y +S
Sbjct: 16 LPFILIFIYIGLKNILNRRIKSGFLLIFIGVGTYLGTSDFFVDRFLFKLESEYS--TIST 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++G++ +LLG G A PS + +RI +T + Y + I ISG
Sbjct: 74 VKLQEGDVYILLGGGIVPN---SAGGNVPSEGANARIIKTAQFYNKYPK-----KIYISG 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P ++ +ES VY +L+ G+ ++I +E +S +T +NA + M++ + K +L++
Sbjct: 126 GSPLQNKESESSVYKRELVALGIPSENIVIEEKSRNTRENALYIRKMMEGSKEKKAVLIT 185
Query: 181 SAYHLKRSQLYFQH--FGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGI 233
SA+H+ RS F G+ + D++ ++ IP NF + LKEYIG+
Sbjct: 186 SAFHIPRSVKTFDDGEGGLIFYPAPCDFMAKKEAENFFDYIPEYTNFKKLGILLKEYIGM 245
Query: 234 LIAYYR 239
L R
Sbjct: 246 LYYRIR 251
>gi|254455840|ref|ZP_05069269.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082842|gb|EDZ60268.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 228
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 12/210 (5%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
I+ L+ +L+ YQ L P + + IV+L I + + E ++
Sbjct: 25 VCSLPIVSDKLVAYLESDYQ--LSKPSNIEPADSIVVLSGMIRTINSKDGLDYEFG-EAS 81
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
RIF + L+K K + I+ G P G+ E + +G+ ++I L
Sbjct: 82 DRIFAGINLFKEKKAPKL---ILTRGKLPWSVGIPEGEYLKEIAINNGISENNILLTENV 138
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----A 209
+T Q A+ ++ + ++LV+SA+H+ R+Q F+ GIN D+
Sbjct: 139 ENTDQEAKAIKKLLSEDK-SKVLLVTSAFHMPRAQKVFEAAGINVVPFPVDFQKGLSKIT 197
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ S IP + T ++E IG + +
Sbjct: 198 FMSFIPSANALSGTSFFVREMIGRIYYNLK 227
>gi|308274760|emb|CBX31359.1| hypothetical protein N47_E48710 [uncultured Desulfobacterium sp.]
Length = 254
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 18/248 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF--FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ + +FL+ + LL + K+ + ++ FI + I P +L +L+ YQ PL+
Sbjct: 15 LTVCILFLVCGVFFLLLKKKEKMSKSIIVFGVISLVFISFNIFPDKILGYLEHKYQ-PLI 73
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ D IV+LG G + I + S R+ E + ++ + II
Sbjct: 74 HIKLISDARWIVVLGGGCKGDLMLDPI-SRLTSDSLFRVVEGISIHNKIPES----KIIF 128
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG ++ES + L GV +D I E++ DT A ++ N + IL
Sbjct: 129 SGGSVFST-ISESEAMADVALALGVNKDKIVEESEGPDTEAQALLIKKIVGNDKF---IL 184
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIG 232
V+SA+H+ RS F G++ A+ + YL P SA ELA+ EY+G
Sbjct: 185 VTSAFHMPRSMAVFNKAGMHPIAAPAGYLVKKRKNINLLLFFPKSAEIKKMELAVHEYLG 244
Query: 233 ILIAYYRG 240
+ A RG
Sbjct: 245 LFWAKIRG 252
>gi|167629577|ref|YP_001680076.1| hypothetical protein HM1_1492 [Heliobacterium modesticaldum Ice1]
gi|167592317|gb|ABZ84065.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 252
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 16/221 (7%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F + LL + +++ L+ Y P K G++I++LG G T+
Sbjct: 42 FSTAMALLLYLFSISAVGETMIRSLENRYLPP-----DKPSGDVIIMLGGGATMDTPDID 96
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ + S +R+ RL++ II+S G ++ ES + +L GV
Sbjct: 97 GLGQMTGGSANRLLTAARLHQL-----TGAPIIVSAGQVFENSGNESRIAFRQLTGLGVP 151
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I +E S +T +NA+++ ++ ILV+SA+H++RS +F G++T +
Sbjct: 152 ESMIIVEEMSRNTEENARYTKEILDARGFHKPILVTSAFHMERSVGHFSKLGVSTLPFPT 211
Query: 205 DYLNAY------YSIIPLSANFYLTELALKEYIGILIAYYR 239
DY P + LA+KEY+G++ + +
Sbjct: 212 DYRVNRQARYSLNDWAPSAVAMSNASLAMKEYLGLIPLWLK 252
>gi|146341164|ref|YP_001206212.1| hypothetical protein BRADO4236 [Bradyrhizobium sp. ORS278]
gi|146193970|emb|CAL77987.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 262
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 8/237 (3%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ L+ + L ++ ++ MLL + +G + +++L L+ + + + K
Sbjct: 22 LGLLGAILMLTRFAVLGRRLVASAMLLLAIVGLTPLGSLMLYPLESRFPKWDPA---KGA 78
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG + + R+ + L + + T +
Sbjct: 79 PDGIIVLGGPVDSDLSAIYGM-PVTVAGADRVIQAAVLARRYPNARVLFTG--GSANLIA 135
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E+ V L GV + + LE QS +T++NA FS +MI G+ +LV+SAYH+
Sbjct: 136 TDAKEADVGAEILESLGVAKQRLLLERQSRNTYENAIFSKAMIAPKPGERWLLVTSAYHM 195
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIP--LSANFYLTELALKEYIGILIAYYRG 240
RS F+ G + D+ ++A++E++G++ RG
Sbjct: 196 PRSVGLFRKAGFPVEPYPVDWRVGRVLDFDGVSLQGLRRADIAVREWVGLVAYRLRG 252
>gi|148560243|ref|YP_001259097.1| hypothetical protein BOV_1136 [Brucella ovis ATCC 25840]
gi|148371500|gb|ABQ61479.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 268
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 53/247 (21%), Positives = 98/247 (39%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 19 PLTIIFLLVAIGLLAAWRGFRRLGIAMLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 78
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 79 LPQH---VDGIIVLGGYMNGEIVAGRQNFELN-SAADRIVETMRLARLYPDAKILVSG-- 132
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ LL+ G + E + +T +NA FS ++ + G+ +L
Sbjct: 133 GEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKLRNTVENAIFSQALAQPKPGETWLL 192
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ R+ F+ G + A DY + + +AL+E+ G+
Sbjct: 193 VTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGL 252
Query: 234 LIAYYRG 240
++ G
Sbjct: 253 AAYWWTG 259
>gi|148255961|ref|YP_001240546.1| hypothetical protein BBta_4612 [Bradyrhizobium sp. BTAi1]
gi|146408134|gb|ABQ36640.1| hypothetical protein BBta_4612 [Bradyrhizobium sp. BTAi1]
Length = 262
Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 99/228 (43%), Gaps = 12/228 (5%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++ + MLL + +G + +++L L+ + + + K + I++LG
Sbjct: 33 RFAVFGRRLVVAAMLLLAVLGLTPLGSLMLSPLESRFPKWDPA---KGAPDGIIVLGGPV 89
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVY 134
+I + R+ + L + + I+ +GG E+ V
Sbjct: 90 DPDLSIMYGM-PVTVAGADRLIQAAALARRYP----NARIVFTGGSANLISTDAREADVA 144
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ LL GV ++ + LE +S +T++NA FS +M+ G+ +LV+SA+H+ RS F+
Sbjct: 145 ADILLSLGVAKERLTLERESRNTYENAVFSKAMVAPKPGERWLLVTSAFHMPRSVGLFRK 204
Query: 195 FGINTKASCSDYLNAYYSIIP--LSANFYLTELALKEYIGILIAYYRG 240
G + D+ + ++A++E++G++ RG
Sbjct: 205 AGFPVEPYPVDWRVGRVLDVDGVSLLGLRRADIAVREWVGLVAYRLRG 252
>gi|92117952|ref|YP_577681.1| hypothetical protein Nham_2431 [Nitrobacter hamburgensis X14]
gi|91800846|gb|ABE63221.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 267
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 97/231 (41%), Gaps = 11/231 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++ + ++ ++ G+ + +LL L + ++ + I++LG
Sbjct: 31 IMKRRRAGTGLLATGVMALLIFGYSPLGNVLLLTLSERFPAWHF---DGREPDGIIILGG 87
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ +E + + RI + L + + + + + ++E+ +
Sbjct: 88 AIEPELSAARKAVEVNG-AAERIIGGLELARRFPRARVVYSG--GSANLIADPVSEAPIA 144
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L G+ + I LE++S T +NA+F+ ++ G+ +LV+SAYH+ RS F+
Sbjct: 145 GRLLETFGISPERIVLESESRTTDENARFTRKLVSPKPGERWLLVTSAYHMPRSIGVFRK 204
Query: 195 FGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G++ +A D+ A+ LSA + A+ E+ G+L G
Sbjct: 205 AGLDVEAYPVDWRTRGWIDAWTPFDRLSAGLARADTAVHEWCGLLAYRLTG 255
>gi|94266695|ref|ZP_01290369.1| Protein of unknown function DUF218 [delta proteobacterium MLMS-1]
gi|93452658|gb|EAT03218.1| Protein of unknown function DUF218 [delta proteobacterium MLMS-1]
Length = 254
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 14/220 (6%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M + F ++ L L+ + + + IVLLG G +P
Sbjct: 42 MVLAVAWLWFWSLPVVADALRLSLEGRFAP--QRAEELPAADFIVLLGGGVRGVPADWPY 99
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+ R++ RLY + K + + G + +E+ LL GV
Sbjct: 100 PD--LNAAADRVWHAPRLYHADKAPLIIVSG--GGKEWHGERGSEAEAMRELLLAFGVPD 155
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I+LE +S T +NA +++ ++ LV+SA H+ RS F+ GIN + +D
Sbjct: 156 GAIRLEDRSRSTRENALYTAPLVGERPVL---LVTSAQHMPRSLATFRAVGINAVPAPTD 212
Query: 206 YLNAY-----YSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ ++P + + + + ALKEY+G+L+ RG
Sbjct: 213 FEVIPQPLHSLRLLPDAHSLHQSTSALKEYLGLLVYRLRG 252
>gi|123441863|ref|YP_001005846.1| hypothetical protein YE1552 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088824|emb|CAL11630.1| putative inner membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 255
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 98/252 (38%), Gaps = 23/252 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK----IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M L ++ +++ +L R + L I + LL L+ Y
Sbjct: 14 MPLPFLLIVMGLALILLWFTRWQKSGKTLFTLSWLALLLISLQPVADRLLLPLEKQYA-- 71
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q + IV+LG G T P A S R+ E +RLY++ M T
Sbjct: 72 --TYQGNDPVDYIVVLGGGYTFNPN-WAPSANLFSNSLPRVTEGVRLYRAHPNAKMVFT- 127
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ + + G+ DI + Q DT + A +S++ K
Sbjct: 128 ----SSAGPNSQSSAKTAAQVAESLGIPATDIIVLEQPKDTVEEAAAVASLVG---DKPF 180
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEY 230
+LV+SA HL R+ +F G++ + ++ L+++ IP +A +E A E
Sbjct: 181 LLVTSASHLPRAIKFFTAKGLHPIPAPANQLAITTPLHSWERTIPAAAYLGHSERAWYET 240
Query: 231 IGILIAYYRGNR 242
+G+L GN+
Sbjct: 241 LGLLWQKLTGNK 252
>gi|254877103|ref|ZP_05249813.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843124|gb|EET21538.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 231
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 14/236 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++F I+ + + +F+ +++ +G G+I IL K + + +
Sbjct: 7 IGFLFFIILIIVCIFATGYLRYFVIIVTIIYYLVGNGLIANILAKPI----RLESTDIKQ 62
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I+LLG G ++EPS +Y RI +T +Y Q IIISGG
Sbjct: 63 CANTKAIILLGAGIN----QAFDKLEPSLSAYDRILKTAEVYNQYPQD-----IIISGGS 113
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P + L+E+ VY + L + G+ + I+LE QS +T++NAQF+ ++ + L++
Sbjct: 114 PSGYKLSEAEVYADILYKLGIPKSKIRLEKQSKNTYENAQFTKKILSDHNNTYC-LITGG 172
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H +R++L F F INT S L S +P + +FY+T+ + EY+GI+ Y
Sbjct: 173 IHYQRAKLIFDSFNINTINIASSKLAPEISFLPSAYSFYITQAIIHEYLGIIKFYL 228
>gi|298527828|ref|ZP_07015232.1| protein of unknown function DUF218 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511480|gb|EFI35382.1| protein of unknown function DUF218 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 256
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 104/246 (42%), Gaps = 17/246 (6%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ L+ + L+ + + ++ F+ + I + +L+ L+ YQ
Sbjct: 18 LPLALQVILLGLIFIIFKRNRTGFVFILAGTVFLGAISVEPVADRMLRPLEQKYQPLQY- 76
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ IV+LG+G + +P + S S SR+ E +R+ + ++
Sbjct: 77 -DDTSAPSYIVVLGSGHFLQEGLPPNAL-LSQSSLSRVVEGIRIKNMYPD-----STLVF 129
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G ++ +A S + +E G++ +DI + ++ DT A + ++ ++ +LV
Sbjct: 130 TGGRFRYPVASSELAALASVELGIDENDILVVAEAKDTEDEASLARDIVG---DESFVLV 186
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGIL 234
+SA H+ RS + F+ G++ S +D+ + P + TE E +G+
Sbjct: 187 TSASHMHRSMIIFKSEGMDPIPSPTDFRAPDKLYNLWDYFPSAGALAKTERVFYERLGLA 246
Query: 235 IAYYRG 240
A RG
Sbjct: 247 WAMIRG 252
>gi|148241215|ref|YP_001226372.1| hypothetical protein SynRCC307_0116 [Synechococcus sp. RCC307]
gi|147849525|emb|CAK27019.1| Uncharacterised conserved membrane protein [Synechococcus sp.
RCC307]
Length = 265
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 89/238 (37%), Gaps = 18/238 (7%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + L+ + ++ LL+ L+ L+P+ + + +++LG G
Sbjct: 30 RKQRWALPLSITGWLVIAVPAMPVVSDALLRQLEDQAAS--LTPKSLPEADAVLVLGGGI 87
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P + ++ R+ +RL++ K + + E+++
Sbjct: 88 RPAP--AKGQGVEVNEAGDRLLCGVRLWRQGKAPVLITSGARVSFTLNDPIAPEAVLSQQ 145
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF- 195
E GV + L ++ T + AQ + + K +ILV+SA+H+ R+ F+
Sbjct: 146 LAQELGVPASALLLNEKARTTAEEAQRINQLAAEQGWKQLILVTSAFHMPRALASFKRQS 205
Query: 196 GINTKASCSDYLNAY-------------YSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ DY +IP S T LKE++G+L+ RG
Sbjct: 206 ELQIIPVACDYQLDPQHQNQAFSWGELLIDLIPSSDALDQTTQVLKEHLGLLVYQLRG 263
>gi|190889771|ref|YP_001976313.1| hypothetical protein RHECIAT_CH0000139 [Rhizobium etli CIAT 652]
gi|190695050|gb|ACE89135.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 262
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 93/247 (37%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWH---LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
LS FL+V + LL + I L+ + +L++ L+ + +P
Sbjct: 14 PLSLAFLLVFFALIAGLLRWRVLSILGTGASALILFVTLYTTAGNLLMQGLEQRFAKPAA 73
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P ++ +++LG IE + R E +RL + Q + +
Sbjct: 74 DP---ENLQCMIVLGGAFENEVNTARHGIEFNG-GADRFVEALRLAQKFPQSRILVSG-- 127
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G ++ G+ RD + ETQS TF+NA + + + +L
Sbjct: 128 GDGSMSGIYEGDAAASERFFPLFGIGRDRLIEETQSRTTFENAVNTRDFLAGQGLSHCLL 187
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGI 233
++S +H+ RS F+ GI+ +DY + N A++E+ G+
Sbjct: 188 ITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPNLNAQNMATAIREWYGL 247
Query: 234 LIAYYRG 240
+ Y G
Sbjct: 248 VGYYLAG 254
>gi|255744859|ref|ZP_05418809.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholera CIRS 101]
gi|262161858|ref|ZP_06030876.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae INDRE 91/1]
gi|262189661|ref|ZP_06048039.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae CT 5369-93]
gi|255737330|gb|EET92725.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholera CIRS 101]
gi|262028590|gb|EEY47245.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae INDRE 91/1]
gi|262034459|gb|EEY52821.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae CT 5369-93]
gi|327484319|gb|AEA78726.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae LMA3894-4]
Length = 273
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 99/244 (40%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L + + + T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFLPVE- 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG I IP E + + R+ E +R+ + + + G
Sbjct: 77 --GTLDYVMVLGNGHVIDDDIP-PTSELTRAALMRLTEGIRISRMYPGSKLILS-----G 128
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ ++LV+S
Sbjct: 129 YAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQK---RMVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G++
Sbjct: 186 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLMW 245
Query: 236 AYYR 239
R
Sbjct: 246 QTLR 249
>gi|330445713|ref|ZP_08309365.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489904|dbj|GAA03862.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 275
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 104/245 (42%), Gaps = 19/245 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ + ++ W + F+ +F+ + + + T LL+ L+ ++ + S
Sbjct: 18 LLIIGVIGLLVLWFSRKTKLASGIIAFSFLGIFA-VSFQPVSTSLLRPLEQEHRAFVGSS 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + +++LGNG I T P I E S + R+ E +R+Y+ M +
Sbjct: 77 ---KPIDFVMVLGNGHVIDKTFP-ITSELSRTALMRLAEGIRIYRMYPGSKMILS----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ + + L GV + DI L + DT++ A ++S++ + LV+
Sbjct: 128 GYSGGTTMSHARMLAKVALALGVSKSDILLLETAKDTWEEAHQAASVVGSKNLV---LVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G++ + +++ + P S TE E +G+L
Sbjct: 185 SASHMSRALNEFHQAGLDPIPAPTNFMATNKIKQPWVRYAPSSQFLNQTERYWHEKLGML 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQDLR 249
>gi|239832066|ref|ZP_04680395.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824333|gb|EEQ95901.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 279
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 93/244 (38%), Gaps = 11/244 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++S + LI + ++ + + + +LL L+ + +P P
Sbjct: 33 IISVLVLIAFLAIWRGMRGFSMGLLALSLATLFLAAFTTLGAVLLAPLEDRFAKPDAMP- 91
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LG E + + RIFE MRL + + + G
Sbjct: 92 --QRVDGIVVLGGYMNGEINAGRKGFELN-SAADRIFEAMRLARLYPDAKVIVSG--GEG 146
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E+ L + G + E +S +T +NA FS + + G+ +LV+S
Sbjct: 147 AFFEKSAKEADSTRQMLADLGFSGERYIFENKSRNTVENAVFSKELAQPKPGETWLLVTS 206
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
AYH+ RS F+ G + A D+ + + +A++E+ G+
Sbjct: 207 AYHMPRSIGCFRKAGFDVVAWPVDFKTRASEHFALYLESPNEALSRFSVAMREWGGLAAY 266
Query: 237 YYRG 240
+ G
Sbjct: 267 WLAG 270
>gi|156973875|ref|YP_001444782.1| hypothetical protein VIBHAR_01585 [Vibrio harveyi ATCC BAA-1116]
gi|156525469|gb|ABU70555.1| hypothetical protein VIBHAR_01585 [Vibrio harveyi ATCC BAA-1116]
Length = 268
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 19/233 (8%)
Query: 16 LCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ F+ F + + + + T LL L+ Y+ L + +++LGN
Sbjct: 31 FTTKRKTGCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFLPVS---GTVDYVMVLGN 87
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + IP + S + R+ E +R+ + + + G ++ + +
Sbjct: 88 GHVVDNEIP-PTSQLSRTALMRLTEGIRILRMYPGAKLILS-----GYAGGSEISHARMM 141
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
N L GV + DI L + DT++ A+ +++ +K LV+SA H+KR+ F
Sbjct: 142 ANVALSLGVAKSDIILLEDAKDTWEEARQAAAFVKQKDIV---LVTSASHMKRALYEFNA 198
Query: 195 FGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
GI + ++++ + P + TEL EY+G L R N
Sbjct: 199 AGIKPIPAPTNFMAIDDIEQPWQKYAPKARYLEQTELYWYEYLGGLWQKLRDN 251
>gi|152993138|ref|YP_001358859.1| hypothetical protein SUN_1551 [Sulfurovum sp. NBC37-1]
gi|151424999|dbj|BAF72502.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 248
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 97/243 (39%), Gaps = 16/243 (6%)
Query: 2 LLSWIFLIVSYWHLL-CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ +F+ ++ + + F +L + + ++LL L+ + L
Sbjct: 16 PIFLLFMAFGFYFFSQKRYVGSKRFFLVGILWIILLSYAPFSSLLLLPLERQFSSVDL-- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I +LG IP + E +R+ E + LYK K ++
Sbjct: 74 -NGTNAGYIHVLGTAHVAREGIP-LSSELDPSGLARVTEGVLLYKQHKGMK-----LVFS 126
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + L+ + GV +DI + DT + + +M + QGK+++LV+
Sbjct: 127 GYGKDEPLSNAKCSAALAQALGVREEDIIVFETPKDTLEE---AGAMSEMAQGKHVVLVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI---IPLSANFYLTELALKEYIGILIAY 237
SA H+ R+ F+ GI + +D+ +P + +E A EY+G+L +
Sbjct: 184 SASHMLRASRLFKKAGIKVIEAPTDFKVKKPDDLLQLPGAEGLRRSETAFHEYLGLLWFW 243
Query: 238 YRG 240
+G
Sbjct: 244 LKG 246
>gi|238027594|ref|YP_002911825.1| hypothetical protein bglu_1g20120 [Burkholderia glumae BGR1]
gi|237876788|gb|ACR29121.1| Hypothetical protein bglu_1g20120 [Burkholderia glumae BGR1]
Length = 238
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 8/237 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + + + +L GW P + L + P +
Sbjct: 2 ILFNSFVLLFAAAAFWRTRRATLITLGLALLAGIATGWLTAPLVALAESGVAPAEPPV-- 59
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I++LG G + + P +RI L+ +C++ CT+I++G
Sbjct: 60 --FAGRTAIIVLGAGIKRHDGL----LVPPENGLARIARAAELHSACQRSGARCTVIVTG 113
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDP +HG E+ +Y LLE GV D+ LE +S T++NAQ+++ ++ ILV+
Sbjct: 114 GDPHRHGTTEADLYAPLLLERGVPPRDLTLERRSRTTYENAQYTAPILLAKHYDETILVT 173
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S+Y ++R+ L F FG+ + ++ A P NF AL E GI+ Y
Sbjct: 174 SSYQMRRALLDFARFGVTPQPVFANRDRAICGWRPRWTNFVTASRALHEIAGIIQFY 230
>gi|218509953|ref|ZP_03507831.1| hypothetical protein RetlB5_22095 [Rhizobium etli Brasil 5]
Length = 262
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/247 (19%), Positives = 93/247 (37%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVSYWH---LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
LS FL+V + LL I + L+ + +L++ L+ + +P
Sbjct: 14 PLSLAFLLVFFALVAGLLRWRALSIVAATASALILFVTLYTTAGNLLMQGLEQRFAKPAA 73
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P ++ +++LG IE + R E +RL + + +
Sbjct: 74 DP---ENLQCMIVLGGAFENEVNTARHGIEFNG-GADRFVEALRLAQKFPDSRILVSG-- 127
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G ++ G+ R+ + ETQS TF+NA + + + + +L
Sbjct: 128 GDGSMSGIYEGDAAASERFFPLFGIGRERLIEETQSRTTFENAVNTREFLASQGLSHCLL 187
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGI 233
++S +H+ RS F+ GI+ +DY + N A++E+ G+
Sbjct: 188 ITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPNLNAQNMATAIREWYGL 247
Query: 234 LIAYYRG 240
+ Y G
Sbjct: 248 VGYYLAG 254
>gi|119502798|ref|ZP_01624883.1| hypothetical protein MGP2080_05817 [marine gamma proteobacterium
HTCC2080]
gi|119461144|gb|EAW42234.1| hypothetical protein MGP2080_05817 [marine gamma proteobacterium
HTCC2080]
Length = 236
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 15/238 (6%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ LI + + L+ F L++ L+ + P SP+
Sbjct: 2 LLLLIAVISGAIGRRGLSWLMTLLGFLVIYFPATEFGSEALMQPLEGRH--PAFSPEELP 59
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IVLLG + + R+ LY + K II+ G
Sbjct: 60 AAQAIVLLGGASNGAARFGRGAD--LNDAADRVMFAAELYFAGKA-----PIILISGGAP 112
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E+ + +L + R + LETQS TF NA + M+KN ++I+LV+S H
Sbjct: 113 ETMQPEAELLAQQLQALQIPRKQLLLETQSRTTFDNAVMAGEMLKNAGLQHILLVTSGAH 172
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGILIA 236
++RS F+ G+ A+ +D+ +S IP A + A+ E++G
Sbjct: 173 MRRSLALFERQGLQVTAAATDHQIPKFSDPYIPGWIPTYARLARSSRAIHEWVGYWAY 230
>gi|254457969|ref|ZP_05071396.1| integral membrane protein [Campylobacterales bacterium GD 1]
gi|207085362|gb|EDZ62647.1| integral membrane protein [Campylobacterales bacterium GD 1]
Length = 243
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 17/242 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+ S + L + K+ F LLF F + L+ L+ Y +
Sbjct: 15 MVFSLFVIWFILSKLKKYKLAKVSLSLAFGLLFMF-SYPPFSNYLISDLENQYPK----Y 69
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+K + I +LGNG T P I S R E + +Y + +I
Sbjct: 70 DYKHNIKYIHVLGNGHNGDETQP-ISSIISEAGTRRALEGIIIYNQTEGSK-----LIFT 123
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ + + L GV+ +DI L ++ DT + A F+ ++ + +LV+
Sbjct: 124 GFGGDEKISVAKMNKRLALALGVKEEDIILGEKAKDTQEEAYFTKELVG---DEPFVLVT 180
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS---IIPLSANFYLTELALKEYIGILIAY 237
SA H+ RS + F+ G+ A+ + + + +P +FYL+++A+ EY+GIL +
Sbjct: 181 SASHIPRSMMLFESIGLKPIAAPTAFYKDKFRSFLKLPTMGSFYLSQIAMHEYLGILWSK 240
Query: 238 YR 239
R
Sbjct: 241 LR 242
>gi|300021971|ref|YP_003754582.1| hypothetical protein Hden_0439 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523792|gb|ADJ22261.1| protein of unknown function DUF218 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 264
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/244 (18%), Positives = 100/244 (40%), Gaps = 12/244 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + + + + + ++ + G+ + L+ L+ +++ P
Sbjct: 18 LAVLLIAAGFMLYRFRPSAARWPIALGFSWLAVAGFLPLGNALVLPLEQRFEQ-RQPPLP 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
I++LG T + + +S R+ E +R+ + + I+ +GG
Sbjct: 77 DGHLTGIIVLGGFEDGWVTSNRGGLAIN-ESAERLTEAIRIARQRPE----LKIVFTGGV 131
Query: 123 PQKHGLAESIVY-NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G E+ ++++G+ + + +E S DT++NA + + +LV+S
Sbjct: 132 GDLFGGFEASEAIRQYVVDAGIAPERVIIENGSRDTYENAVLTLQTLNPAPDDRWLLVTS 191
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
AYH+ R+ F+ G+N D+ I ++A +LA++E+IG++
Sbjct: 192 AYHMPRAVGAFRQAGLNISPFPVDFRTRDAGDILRFPISVAAGLQRADLAVREWIGLVAY 251
Query: 237 YYRG 240
G
Sbjct: 252 RIAG 255
>gi|241207055|ref|YP_002978151.1| hypothetical protein Rleg_4373 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860945|gb|ACS58612.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 262
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 91/244 (37%), Gaps = 11/244 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L ++ + LL I I + L+ + +L++ L+ + +P P
Sbjct: 17 LAFFLVFLALLAGLLRWRILSILGAAGSALILFVTLYTTAGNLLMQGLEQRFAKPAADPD 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LG G IE + R E +RL + Q + + G
Sbjct: 77 SLQ---CMIVLGGGFENEVNTARHGIEFNG-GADRFIEALRLAQKFPQSRILVSG--GDG 130
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ GV RD + E QS TF+NA + + + N +L++S
Sbjct: 131 SMSGIYEGDAAASERFFPLFGVGRDRLIEERQSRTTFENAVNTKEFLASQGLSNCLLITS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
+H+ RS F+ GI+ +DY + N A++E+ G++
Sbjct: 191 GFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRLGLDFTQPNLNAQNMATAIREWYGLVGY 250
Query: 237 YYRG 240
Y G
Sbjct: 251 YLAG 254
>gi|238795861|ref|ZP_04639374.1| hypothetical protein ymoll0001_25330 [Yersinia mollaretii ATCC
43969]
gi|238720324|gb|EEQ12127.1| hypothetical protein ymoll0001_25330 [Yersinia mollaretii ATCC
43969]
Length = 263
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 92/241 (38%), Gaps = 20/241 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
++ W Q K F + L+ I + LL L+ Y + Q
Sbjct: 25 LALILLWFTRWQKSGKTLF-TLSWLVLLLISLQPVADRLLLPLEKQYA----TYQGNDPV 79
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RLY++ M T G +
Sbjct: 80 DYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGVRLYRAHPDAKMVFT-----GGSTAN 133
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI + Q DT + A ++++ + LV+SA HL
Sbjct: 134 NQSSAKTAAQVAESLGVPAADIVVLEQPKDTHEEAAAVATLVGDKPFL---LVTSASHLP 190
Query: 187 RSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +F G++ + ++ L+++ IP + +E A E +G++ G
Sbjct: 191 RAIKFFTAIGLHPIPAPANQLAITTPLHSWERTIPAAVYLGHSERAWYETLGLMWQKLNG 250
Query: 241 N 241
Sbjct: 251 G 251
>gi|89092000|ref|ZP_01164955.1| hypothetical protein MED92_07531 [Oceanospirillum sp. MED92]
gi|89083735|gb|EAR62952.1| hypothetical protein MED92_07531 [Oceanospirillum sp. MED92]
Length = 272
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 9/227 (3%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +F + C +LL + + L+ L+ + +P LS + I++LG G
Sbjct: 33 WKKALGVFLVWCSVLLTIVVSQYPVANHALEPLESYFSKPNLSSLEQPLAG-IIVLGGGE 91
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ E + R+ L + + T G + G + V N
Sbjct: 92 DAELSGIHGSNEFN-SGAERLMVLPALMLRNPKLQVIYTG--GSGSIFRPGYRGADVAQN 148
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNIILVSSAYHLKRSQLYFQ 193
L E G+ + +E S +T+QNA ++ +I + + +L++SA+H+ RS F+
Sbjct: 149 WLSEQGLAG-RLIIERDSRNTYQNALYTRELINELGADSQGSWLLITSAFHMPRSVGVFR 207
Query: 194 HFGINTKASCSDYLNAYYSIIPL-SANFYLTELALKEYIGILIAYYR 239
GI+ DY A P + N LA++E+IG+L YY
Sbjct: 208 KAGIDVVPYPVDYRVAENRWRPSLNRNMADLNLAVREWIGLLAYYYT 254
>gi|21231145|ref|NP_637062.1| hypothetical protein XCC1692 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768847|ref|YP_243609.1| hypothetical protein XC_2539 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991962|ref|YP_001903972.1| hypothetical protein xccb100_2567 [Xanthomonas campestris pv.
campestris str. B100]
gi|21112782|gb|AAM40986.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574179|gb|AAY49589.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733722|emb|CAP51927.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
Length = 253
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 89/241 (36%), Positives = 131/241 (54%), Gaps = 7/241 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQ---SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+LS + ++ + L+ + + +LL +G G +P+ +L+ LQ +
Sbjct: 1 MMLSLVCVLFGFAWLIDRLGMRRFSRLLGALSLLLVLAVGCGPLPSWMLRDLQRTGANDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N IVLLG GT E + +Y RI E RLY++C C I
Sbjct: 61 T---DWGARNAIVLLGAGTVRSD-RAGAPAEANVFAYGRIVEAARLYRACAATGNDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY LL GVE D+ LE S+ T+QNAQFS +++ + + I+
Sbjct: 117 ISGGDARGLGLSEAVVYRRVLLGLGVEAGDLILEPASMTTWQNAQFSQPLLRAYRPQRIV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
LVSSA HL R++LYF HFG+ T SD+L A +S++P S NF L ++AL EY+GI
Sbjct: 177 LVSSATHLHRAELYFLHFGMRTTPVRSDWLRASWSLLPQSYNFTLADVALHEYLGIARYR 236
Query: 238 Y 238
Sbjct: 237 V 237
>gi|116249878|ref|YP_765716.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254526|emb|CAK05600.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 262
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 90/244 (36%), Gaps = 11/244 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L ++ + LL I + L+ + +L++ L+ + +P P
Sbjct: 17 LAFFLVFLALLAGLLRWRTLSILGAAGSALILFVTLYTTAGNLLMQGLEQRFAKPAADPD 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LG G IE + R E +RL + Q + + G
Sbjct: 77 SLQ---CMIVLGGGFENEVNTARHGIEFNG-GADRFIEALRLAQKFPQSRILVSG--GDG 130
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ GV RD + E QS TF+NA + + + N +L++S
Sbjct: 131 SISGIYEGDAAASERFFPLFGVGRDRLIEERQSRTTFENAVNTKEFLASQGLSNCLLITS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
+H+ RS F+ GI+ +DY S N A++E+ G++
Sbjct: 191 GFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRLGLDFTQPSLNAQNLATAIREWYGLVGY 250
Query: 237 YYRG 240
Y G
Sbjct: 251 YLAG 254
>gi|317052073|ref|YP_004113189.1| hypothetical protein Selin_1906 [Desulfurispirillum indicum S5]
gi|316947157|gb|ADU66633.1| protein of unknown function DUF218 [Desulfurispirillum indicum S5]
Length = 249
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/241 (18%), Positives = 92/241 (38%), Gaps = 13/241 (5%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ + + S + I S +L + + L LQ P + +
Sbjct: 16 ALLIAVGSLLCIRSHRRLGITLWSIGLLSLLLLSLPVTSAWLHSGLQQH---PPPTGKDI 72
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ IV+LG G P ++ R+ L + I++SGG
Sbjct: 73 RRAQAIVILGGGRDYGAPEFGAEDAPGNATWRRLAYGAHLARQ-----SGLPILVSGGRV 127
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+E+ + + L + E S T +NA++S+ +++N +I+LV+ A+
Sbjct: 128 HGELHSEAWLMDQALR-HSFGLEAQWREEHSRTTRENARYSAPILQNADITHILLVTQAW 186
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYS----IIPLSANFYLTELALKEYIGILIAYYR 239
HL R+ F+ G+ + +D+ + IP + + + A+ E++G +
Sbjct: 187 HLPRALPEFRRQGLEVIPAPTDFASPPPGGIIAWIPRAHHLERSTQAIHEWLGKAVYRLL 246
Query: 240 G 240
G
Sbjct: 247 G 247
>gi|307946395|ref|ZP_07661730.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307770059|gb|EFO29285.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 267
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 14/245 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL + + V + Q + + + F+ F+F G G + IL++ L+ +Q +P+
Sbjct: 19 LLILLGVGVFFLFGKRQKLGRGLVLLSFLGFFAF-GLGPLGNILMQPLEDRFQ----TPE 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ I++LG + T + + + R+ +L + + + +
Sbjct: 74 DVGQIDGIIVLGGAIDTVVTNTRLLTSINT-AAERVTVVAQLAREHPKAEVIHSGGEGLL 132
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ L G+ER+ I LE Q+ +T++NA + ++ ++G+ +LV+S
Sbjct: 133 LGSGT--SEAEGVLPLFLSFGIERERIILEDQARNTWENATLTKEQLEPIEGQRWLLVTS 190
Query: 182 AYHLKRSQLYFQHFGIN-TKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILI 235
AYH+ RS F+ G D A + L+ T++A+KE+IG++
Sbjct: 191 AYHMPRSVGVFEAAGWTGIVPYPVDQRTRGPQDAGRWFVGLAEGLKRTDVAVKEWIGLVA 250
Query: 236 AYYRG 240
Y G
Sbjct: 251 YYATG 255
>gi|119945885|ref|YP_943565.1| hypothetical protein Ping_2225 [Psychromonas ingrahamii 37]
gi|119864489|gb|ABM03966.1| hypothetical protein DUF218 [Psychromonas ingrahamii 37]
Length = 254
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q + K + F+LLF + + + L++ L+ Y + Q ++ I++LG+G
Sbjct: 35 RQKLAKFNLLVSFILLF-LLSFMPVSEQLVQPLERQYPPVM---QPAQNFKYILVLGSGG 90
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P++P + + S + SR E +RLY + + ++ G + +++
Sbjct: 91 IADPSLP-VTGQLSAVALSRFVEALRLYHANPNAT-----LVVSGGNFGDIKSHALLMQE 144
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ + +D+I +LDT A+ S +IK G++ +LV+SA H+ RS F+ +
Sbjct: 145 LAMAMNIPKDNIIRLDNTLDTDDEAKQMSKIIK---GQSAVLVTSATHMPRSMGLFKQYN 201
Query: 197 INTKASCSDYL-------NAYYSIIPLSANFYLTELALKEYIGIL 234
+ +DYL YY IP S T++A EY+G L
Sbjct: 202 AFPTPAPADYLAKKREGETPYYYYIPSSNYLDKTKVAWHEYLGKL 246
>gi|170726063|ref|YP_001760089.1| hypothetical protein Swoo_1709 [Shewanella woodyi ATCC 51908]
gi|169811410|gb|ACA85994.1| protein of unknown function DUF218 [Shewanella woodyi ATCC 51908]
Length = 264
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 99/224 (44%), Gaps = 12/224 (5%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+S ++L F+ +L L+ Y ++ G ++++LG+G
Sbjct: 34 RNRKLVRSLLSLAIVLLVFLSSTPGSNLLSSPLENKYS---VNSNTIPKGCLVMVLGSGH 90
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ A++ + S + +R+ E +R Y C +++SG + L+ + V
Sbjct: 91 DESISGTAVQ-KLSSTALARLSEGIRQYNLG----SDCKLVVSGWSGGEGTLSHAEVMAE 145
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+E G++ + I + DT + A+F I N + LV+SA H+ RS FQ+ G
Sbjct: 146 AAIELGIDNERIIRFPLARDTIEEAEFLKWEIGNYPFR---LVTSASHMPRSMAIFQNIG 202
Query: 197 INTKASCSDYLNAY-YSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +A+ +D++ + N + ++ A+ EY+G L +
Sbjct: 203 LAPQAAPTDFMTRQGRWWRLDAENLWSSQRAIHEYLGRLWFKIK 246
>gi|145299198|ref|YP_001142039.1| integral membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851970|gb|ABO90291.1| integral membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 256
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 19/235 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K+ +C +++ + +G + L + L+ ++ +S D IV+L
Sbjct: 30 WFTRFQKTGKL-LATCSLVIVALMGMRPVSYELARGLEQTFPPFEIS--QHPDIEAIVVL 86
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
GNG P IP + + + +R E +RL + Q + ++ G L+ +
Sbjct: 87 GNGHVSDPAIPERAWQ-NNIALARTLEGVRLALAYPQAT-----LVFSGYVSGDPLSNAE 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V G+ER + L + DT + S+ + ++GK + LVSSA HL R+ +
Sbjct: 141 VNARMAASLGIERSRMTLFENNQDTHDE---AVSISRYLKGKQVALVSSATHLPRAMALY 197
Query: 193 QHFGINTKASCSDYL-------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Q G++ + +DY YS +P +E A+ E+IG+ A RG
Sbjct: 198 QGQGLDAVPAPTDYTAKQSQVAQPLYSYLPKGRYLMYSEAAIHEWIGVWWARLRG 252
>gi|254372782|ref|ZP_04988271.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570509|gb|EDN36163.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 231
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 14/236 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +FLI + +F+ +++ IG G++ TIL L+ +
Sbjct: 7 IGCLFLIALIIACIFSKGYLRYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKA 62
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I+LLG G ++EP+ +Y RI +T +Y Q IIISGG
Sbjct: 63 CANTKGIILLGAGINDA----FGKLEPALSAYDRILKTAEVYHQHPQQ-----IIISGGA 113
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P L+E+ +Y + L + G+ + I LE S +T+QNA+F ++ N + LV+
Sbjct: 114 PFGEKLSEAEIYADLLDKLGIPKSKIILEKNSKNTYQNAEFIKKILMNDKNTYC-LVTGG 172
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H KR+++ F F INT + S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 173 IHYKRAKIIFDKFAINTISIASSKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 228
>gi|332162195|ref|YP_004298772.1| hypothetical protein YE105_C2573 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666425|gb|ADZ43069.1| hypothetical protein YE105_C2573 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862909|emb|CBX73045.1| uncharacterized protein ycbC [Yersinia enterocolitica W22703]
Length = 255
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 97/252 (38%), Gaps = 23/252 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK----IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M L ++ +++ +L R + L I + LL L+ Y
Sbjct: 14 MPLPFLLIVMGLALILLWFTRWQKSGKTLFTLSWLALLLISLQPVADRLLLPLEKQYA-- 71
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q + IV+LG G T P A S R+ E +RLY++ M T
Sbjct: 72 --TYQGNDPVDYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGIRLYRAHPNAKMVFT- 127
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
G + + + GV DI Q DT + A ++++ +
Sbjct: 128 ----GSAGPNSQSSAKTAAQVAESLGVPAADIIALEQPKDTVEEAAAVAALVGDKPFL-- 181
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEY 230
LV+SA HL R+ +F G++ + ++ L+++ IP +A +E A E
Sbjct: 182 -LVTSASHLPRAIKFFTAKGLHPIPAPANQLAITTPLHSWERTIPAAAYLGHSERAWYET 240
Query: 231 IGILIAYYRGNR 242
+G+L GN+
Sbjct: 241 LGLLWQKLTGNK 252
>gi|315635988|ref|ZP_07891248.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315479709|gb|EFU70382.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 248
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ F+ L F+ + I +++ L+ +Y +P KD I++LGNG
Sbjct: 35 KKAKIFLVLGFLWFALLSNQTISNMIISPLENAYPALKETP---KDIKYILVLGNGHKTN 91
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P I E + + +R+ E +R YK+ + +I G + + + +
Sbjct: 92 DNFP-ITSELNTTAINRLIEGIRHYKNLENSK-----LIVSGYSFDDVNSHAQMQKKLAI 145
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV DI DT + A + ++ N + ILV++A H+KR+ + F+ +N
Sbjct: 146 SLGVNETDIITLDTPKDTKEEAIEAKKIVGNQKL---ILVTTASHMKRAVMLFEKEDLNI 202
Query: 200 KASCSDYL---NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
AS +++ + Y + + N ELA EY+G++ +Y +G
Sbjct: 203 IASPTNHKFFTSTYPTSYFNATNIKKVELAFHEYLGMVYSYVKG 246
>gi|86355763|ref|YP_467655.1| hypothetical protein RHE_CH00103 [Rhizobium etli CFN 42]
gi|86279865|gb|ABC88928.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 262
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/244 (17%), Positives = 93/244 (38%), Gaps = 12/244 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ + + +L + I + L+ + +L++ L+ + +P P
Sbjct: 17 LAFLLVFFTLIAILLRWRALSILGATASALILFVTLYTTAGNLLMQGLEQRFAKPAADP- 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ +++LG IE + R E +RL + Q + + G
Sbjct: 76 --ENLQCVIVLGGAFENEVNTARHGIEFNG-GADRFIEALRLAQKFPQSRILISG--GDG 130
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ G+ +D + E QS TF+NA + + + + +L++S
Sbjct: 131 SISGIYEGDAAASERFFPLFGIGKDRLIEERQSRTTFENAVNTREFLASQGLSHCLLITS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIA 236
+H+ RS F+ GI+ +DY + N A++E+ G++
Sbjct: 191 GFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPNLNAQSMATAIREWYGLIGY 250
Query: 237 YYRG 240
Y G
Sbjct: 251 YLAG 254
>gi|269139507|ref|YP_003296208.1| hypothetical protein ETAE_2162 [Edwardsiella tarda EIB202]
gi|267985168|gb|ACY84997.1| hypothetical protein ETAE_2162 [Edwardsiella tarda EIB202]
gi|304559396|gb|ADM42060.1| Membrane Protein [Edwardsiella tarda FL6-60]
Length = 265
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 85/236 (36%), Gaps = 18/236 (7%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ +S L + + LL L+ Y + +V
Sbjct: 28 VLLWFTRRQRTGKVLVSFAWLGILLLSMQPLADRLLAPLEDRYP----TLNGPHQARYVV 83
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G T P A S R+ E +R Q +I++G Q + ++
Sbjct: 84 VLGGGYTYNP-QWAPSSNLIGNSLPRVTEGIRQLALNPQ----ARLIVTGAAAQGNPVSS 138
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ V GV+ I + DT Q AQ + ++ N ILV+SA H+ R+
Sbjct: 139 AEVAARVARSLGVDEQRIIVLDSPRDTGQEAQAVADVVGNAPL---ILVTSANHMPRALG 195
Query: 191 YFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+F H G++ + ++ LN + +P +E A E +G L G
Sbjct: 196 FFHHQGLDPIPAPANQLAIASPLNPWERWLPSPLYLGHSERAWYETLGRLWQGLTG 251
>gi|118497421|ref|YP_898471.1| hypothetical protein FTN_0829 [Francisella tularensis subsp.
novicida U112]
gi|118423327|gb|ABK89717.1| conserved hypothetical membrane protein [Francisella novicida U112]
Length = 239
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 14/236 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +FLI + +F+ +++ IG G++ TIL L+ +
Sbjct: 15 IGCLFLIALIITCIFSKGYLRYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKA 70
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I+LLG G ++EP+ +Y RI +T +Y Q IIISGG
Sbjct: 71 CANTKGIILLGAGINDA----FGKLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGA 121
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P L+E+ +Y + L + G+ + I LE S +T+QNA+F ++ N + LV+
Sbjct: 122 PFGEKLSEAEIYADVLDKLGIPKSKIILEKNSKNTYQNAEFIKKILINDKNTYC-LVTGG 180
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H KR+++ F F INT + S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 181 IHYKRAKIIFDKFAINTISIASSKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 236
>gi|91782979|ref|YP_558185.1| putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
gi|91686933|gb|ABE30133.1| Putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
Length = 225
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 10/229 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L + R + + + GW P + L + +P I++LG
Sbjct: 2 LWKRVRRPLAVCTAALFWLLAAGWLTAPLLHLA----QPRSQTDAPARFAPRTAIIMLGG 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT + P +RI + + Y +CK+ C +I+SGG+PQ+H E+ Y
Sbjct: 58 GTVYDDNH---VLVPPRDVLARITASAQNYAACKRAEATCHVIVSGGNPQRHSATEADTY 114
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL V R DI LE S T++NA+ S++++ + ++ILV+SAY + R+ L F
Sbjct: 115 LPYLLRQQVPRADIVLENSSRTTYENARNVSAILEGSRYDSLILVTSAYQMPRAMLDFHR 174
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
FG + S+ A ++P N E+AL E IGI + G
Sbjct: 175 FGFAPQPMISNARRARLGVLPRYDNLVSAEIALHELIGIAQFHVYRAIG 223
>gi|262275607|ref|ZP_06053416.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Grimontia hollisae CIP 101886]
gi|262219415|gb|EEY70731.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Grimontia hollisae CIP 101886]
Length = 271
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/239 (19%), Positives = 100/239 (41%), Gaps = 18/239 (7%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
F + + F + +LL + + LL L+ YQ L + K+
Sbjct: 23 FFGLFLIWFTQRKGFGSFLVFVSLLLIFLTSFQPFTSSLLIKLERQYQPFLPT---KEPV 79
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ +++LG+G + +P E S + R+ E +R++ + + G +
Sbjct: 80 DYVMVLGHGHVVDDELP-PTSELSRVALMRLMEGIRIHFMYPTSKLILS-----GYDGGY 133
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + + L GV +++I L + DT++ A ++S++ N++LV+SA H+
Sbjct: 134 EVSHARMLARVALAMGVNKNNILLLETAKDTWEEAFQAASVVG---DSNLVLVTSANHMP 190
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ FQ+ G+N + +++ + P + E +E +G + R
Sbjct: 191 RAVYEFQNAGLNPIPAPTNFMAQKEIRQPWIKYGPRAQYLEQFERYWQENLGQIWQRLR 249
>gi|157736806|ref|YP_001489489.1| hypothetical protein Abu_0553 [Arcobacter butzleri RM4018]
gi|157698660|gb|ABV66820.1| conserved hypothetical protein (DUF218 domain protein) [Arcobacter
butzleri RM4018]
Length = 248
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ F+ L F+ + I +++ L+ +Y +P KD I++LGNG
Sbjct: 35 KKAKIFLVLGFLWFALLSNQTISNMIISPLENAYPALKETP---KDIKYILVLGNGHKTN 91
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P I E + + +R+ E +R YK+ + +I G + + + +
Sbjct: 92 DNFP-ITSELNTTAINRLIEGIRHYKNLENSK-----LIVSGYSFDDVNSHAQMQKKLAI 145
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV DI DT + A + ++ N + ILV++A H+KR+ + F+ +N
Sbjct: 146 SLGVNEADIITLDTPKDTKEEAIEAKKIVGNQKL---ILVTTASHMKRAVMLFEKEDLNI 202
Query: 200 KASCSDYL---NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
AS +++ + Y + + N ELA EY+G++ +Y +G
Sbjct: 203 IASPTNHKFFTSTYPTSYFNATNIKKVELAFHEYLGMVYSYVKG 246
>gi|121727926|ref|ZP_01680974.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675084|ref|YP_001217265.1| hypothetical protein VC0395_A1321 [Vibrio cholerae O395]
gi|121629776|gb|EAX62192.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|146316967|gb|ABQ21506.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227013622|gb|ACP09832.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 282
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 99/244 (40%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L + + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFLPVE- 85
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG I IP E + + R+ E +R+ + + + G
Sbjct: 86 --GTLDYVMVLGNGHVIDDDIP-PTSELTRAALMRLTEGIRISRMYPGSKLILS-----G 137
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ ++LV+S
Sbjct: 138 YAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQK---RMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G++
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLMW 254
Query: 236 AYYR 239
R
Sbjct: 255 QTLR 258
>gi|15641722|ref|NP_231354.1| hypothetical protein VC1718 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585785|ref|ZP_01675579.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153212106|ref|ZP_01947923.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153817128|ref|ZP_01969795.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153823662|ref|ZP_01976329.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153825454|ref|ZP_01978121.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153827934|ref|ZP_01980601.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|227081867|ref|YP_002810418.1| hypothetical protein VCM66_1658 [Vibrio cholerae M66-2]
gi|229508174|ref|ZP_04397679.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae BX 330286]
gi|229511588|ref|ZP_04401067.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae B33]
gi|229515111|ref|ZP_04404571.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TMA 21]
gi|229518727|ref|ZP_04408170.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae RC9]
gi|229520681|ref|ZP_04410104.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TM 11079-80]
gi|229607747|ref|YP_002878395.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae MJ-1236]
gi|254224867|ref|ZP_04918482.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254285337|ref|ZP_04960302.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254848836|ref|ZP_05238186.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297579300|ref|ZP_06941228.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298498204|ref|ZP_07008011.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656238|gb|AAF94868.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549923|gb|EAX59941.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|124116902|gb|EAY35722.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|125622555|gb|EAZ50874.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126512277|gb|EAZ74871.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126518811|gb|EAZ76034.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|148876515|gb|EDL74650.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149740866|gb|EDM54951.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150424609|gb|EDN16545.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|227009755|gb|ACP05967.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229342236|gb|EEO07231.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TM 11079-80]
gi|229343416|gb|EEO08391.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae RC9]
gi|229347816|gb|EEO12775.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TMA 21]
gi|229351553|gb|EEO16494.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae B33]
gi|229355679|gb|EEO20600.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae BX 330286]
gi|229370402|gb|ACQ60825.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae MJ-1236]
gi|254844541|gb|EET22955.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297536894|gb|EFH75727.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297542537|gb|EFH78587.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 282
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 99/244 (40%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L + + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFLPVE- 85
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG I IP E + + R+ E +R+ + + + G
Sbjct: 86 --GTLDYVMVLGNGHVIDDDIP-PTSELTRAALMRLTEGIRISRMYPGSKLILS-----G 137
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ ++LV+S
Sbjct: 138 YAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQK---RMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G++
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLMW 254
Query: 236 AYYR 239
R
Sbjct: 255 QTLR 258
>gi|222084312|ref|YP_002542841.1| hypothetical protein Arad_0152 [Agrobacterium radiobacter K84]
gi|221721760|gb|ACM24916.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 263
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 95/244 (38%), Gaps = 12/244 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGI-IPTILLKHLQFSYQRPLLSPQ 61
L+++F ++++ +L + S +L F+ +++ L+ + R P
Sbjct: 17 LAFLFGVLAFISVLVRRRGIALASSLLSILILFVALYTNAGAYVVQGLEERFPRVAADPA 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K +++LG T T E R+ E +RL + Q + +
Sbjct: 77 DLK---CMIVLGGATQNQVTTVRGGYELD-SGGDRLIEALRLAQKYPQARIVVSGGDGSI 132
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G ++++ G+ +D + + S TF+NA + ++ +L++S
Sbjct: 133 GGDYEG--DAVISERFFTALGIGKDRLVEDKTSRTTFENAVNTKELLAQNGLSGCLLITS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIA 236
+H+ RS F+ GI+ DY + S N L ++E+IG++
Sbjct: 191 GFHMPRSMGIFRKQGIDVVPWPVDYRSTGKETLGLDFTQPSLNAQLLSTGVREWIGLVGY 250
Query: 237 YYRG 240
Y G
Sbjct: 251 YAVG 254
>gi|318606250|emb|CBY27748.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 255
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 55/252 (21%), Positives = 97/252 (38%), Gaps = 23/252 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK----IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M L ++ +++ +L R + L I + LL L+ Y
Sbjct: 14 MPLPFLLIVMGLALILLWFTRWQKSGKTLFTLSWLALLLISLQPVADRLLLPLEKQYA-- 71
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q + I++LG G T P A S R+ E +RLY++ M T
Sbjct: 72 --TYQGNDPVDYIIVLGGGYTFNPN-WAPSANLFANSLPRVTEGIRLYRAHPNAKMVFT- 127
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
G + + + GV DI Q DT + A ++++ +
Sbjct: 128 ----GSAGPNSQSSAKTAAQVAESLGVPAADIIALEQPKDTVEEAAAVAALVGDKPFL-- 181
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEY 230
LV+SA HL R+ +F G++ + ++ L+++ IP +A +E A E
Sbjct: 182 -LVTSASHLPRAIKFFTAKGLHPIPAPANQLAITTPLHSWERTIPAAAYLGHSERAWYET 240
Query: 231 IGILIAYYRGNR 242
+G+L GN+
Sbjct: 241 LGLLWQKLTGNK 252
>gi|208779215|ref|ZP_03246561.1| conserved hypothetical protein [Francisella novicida FTG]
gi|208745015|gb|EDZ91313.1| conserved hypothetical protein [Francisella novicida FTG]
Length = 231
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 14/236 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +FLI + +F+ +++ IG G++ TIL L+ +
Sbjct: 7 IGCLFLIALIIAYIFSKGYLRYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKA 62
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I+LLG G ++EP+ +Y RI +T +Y Q IIISGG
Sbjct: 63 CANTKGIILLGAGINDA----FGKLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGA 113
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P L+E+ +Y + L + G+ + I LE S +T+QNA+F ++ N + LV+
Sbjct: 114 PFGEKLSEAEIYADVLDKLGIPKSKIILEKNSKNTYQNAEFIKKILMNDKNTYC-LVTGG 172
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H KR+++ F F INT + S I+P S NFY+T+ + EY+GI+ Y
Sbjct: 173 IHYKRAKIIFDKFAINTISIASSKFVPNIKILPNSYNFYITQNIVHEYLGIIRIYL 228
>gi|229529254|ref|ZP_04418644.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae 12129(1)]
gi|229333028|gb|EEN98514.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae 12129(1)]
Length = 282
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 99/244 (40%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L + + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFLPVE- 85
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG I IP E + + R+ E +R+ + + + G
Sbjct: 86 --GTLDYVMVLGNGHVIDDDIP-PTSELTRAALMRLTEGIRISRMYPGSKLILS-----G 137
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ ++LV+S
Sbjct: 138 YAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQK---RMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G++
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLMW 254
Query: 236 AYYR 239
R
Sbjct: 255 QTLR 258
>gi|153873460|ref|ZP_02002036.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
gi|152070073|gb|EDN67963.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
Length = 195
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 12/199 (6%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+ L+ + P IV++G P R + R+ RLY
Sbjct: 1 MVSLERYH--PSQDITDYPMVQAIVVIGGCLESAK--PPRRTFNVGDAGDRVIHAARLYH 56
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+ K ++ G P + E+ L E GV + E S+ T++NA FS
Sbjct: 57 AGKAP---LILVSGGTLPWRKVPPEADAMRAFLEELGVPTKAVMSEPDSITTYENALFSK 113
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANF 220
++ N I+LV+SA+H++RS F+ G + +D+ + + +P
Sbjct: 114 KLLDNKGIHKILLVTSAFHMRRSAAVFRKVGFEVIPAPTDFRVVKNPPSLFDYLPDVRYL 173
Query: 221 YLTELALKEYIGILIAYYR 239
+ T +A+KEYIG+ +
Sbjct: 174 HQTTIAIKEYIGLEYYALK 192
>gi|149915963|ref|ZP_01904486.1| hypothetical protein RAZWK3B_00010 [Roseobacter sp. AzwK-3b]
gi|149810037|gb|EDM69885.1| hypothetical protein RAZWK3B_00010 [Roseobacter sp. AzwK-3b]
Length = 266
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 4 SWIFLIVSYWHLLCQSIRKI---FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
SWI + + ++ R F+++ +L F+G+ + ++++ L+ Y S
Sbjct: 21 SWIVFFLLFARRAVRAQRMAAIGFWVNGTLLFVLFMGFVPLGQLIMRPLEQRYP----SA 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I++LG G + + E + + R+ + L + + T
Sbjct: 77 PDIAPPAGIIVLGGGEDGAMSAASGLPE-TNGAGDRMSAGVALALAYPDAKLIFTG--GS 133
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G G++ +IV GV+ + I LE ++ +T +NA FS ++ + + +LV+
Sbjct: 134 GQFLAGGVSGAIVAKAYFESLGVDPERIILEGRARNTAENAAFSRELVDDPRIGPWVLVT 193
Query: 181 SAYHLKRSQLYFQHFGI-NTKASCSDYL--NAYYSIIPLSANFYLTELALKEYIGILIAY 237
SA+H+ RS F G + DY + NF L++KE+IG+L
Sbjct: 194 SAFHMPRSLATFCAAGWRDITPFPVDYRSITDLEFKWDPTGNFEKLNLSIKEWIGLLAYE 253
Query: 238 YRG 240
+ G
Sbjct: 254 WTG 256
>gi|195536112|ref|ZP_03079119.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|194372589|gb|EDX27300.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
Length = 241
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 14/236 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +FLI + +F+ +++ IG G++ TIL L+ +
Sbjct: 17 IGCLFLIALIITCIFSKGYLRYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKA 72
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I+LLG G ++EP+ +Y RI +T +Y Q IIISGG
Sbjct: 73 CANTKGIILLGAGINDA----FGKLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGA 123
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P L+E+ +Y + L + G+ + I LE S +T+QNA+F ++ N + LV+
Sbjct: 124 PFGEKLSEAEIYADVLDKLGIPKSKIILEKNSKNTYQNAEFIKKILINDKNTYC-LVTGG 182
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H KR+++ F F INT + S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 183 IHYKRAKIIFDKFAINTISIASSKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 238
>gi|328676916|gb|AEB27786.1| putative exported protein [Francisella cf. novicida Fx1]
Length = 231
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +FLI + +F+ +++ I G++ TIL L+ + +
Sbjct: 7 IGCLFLIALIIACIFSKGYLRYFIVALTIVYYLIANGVLGTILALPLKSE----STNIKA 62
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++ I+LLG G ++EP+ +Y RI +T +Y Q IIISGG
Sbjct: 63 CENTKGIILLGAGINDA----FGKLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGA 113
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P L+E+ +Y + L + G+ + I LE S +T+QNA+F ++ N + LV+
Sbjct: 114 PFGEKLSEAEIYADVLDKLGIPKSKIILEKNSKNTYQNAEFIKKILMNDKNTYC-LVTGG 172
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H KR+++ F F INT + S I+P S NFY+T+ + EY+GI+ Y
Sbjct: 173 IHYKRAKIIFDKFAINTISIASSKFVPNIKILPNSYNFYITQNIVHEYLGIIRIYL 228
>gi|253584074|ref|ZP_04861272.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251834646|gb|EES63209.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 252
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 17/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ IFL + ++L + I+ + + L L+ Y PL+S
Sbjct: 16 LPFILIFLYIGLKNILNRKIKFGIILILIGIGTYLGTSDFFIDRFLFKLESEY--PLIST 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D ++ +LLG G A P+ + +RI +T + Y + I +SG
Sbjct: 74 VKLRDADVYILLGGGIIPN---SAGGNVPAEGANTRIMKTAQFYNKYPK-----KIYVSG 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P ++ +ES VY +L+ GV +DI +E +S +T +NA + M++ + K +L++
Sbjct: 126 GTPLQNKESESSVYKRELIGLGVPAEDIVIEEKSRNTKENAVYIKKMMEEAKEKKAVLIT 185
Query: 181 SAYHLKRSQLYFQH--FGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGI 233
SA+H+ RS F G+ + D++ ++ IP NF L LKEYIG+
Sbjct: 186 SAFHMPRSVKTFDKGEEGLIFYPAPCDFMAKSETENFFDYIPKYVNFKKLGLLLKEYIGM 245
Query: 234 LIAYYR 239
+ R
Sbjct: 246 VYYKIR 251
>gi|254228980|ref|ZP_04922401.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262394709|ref|YP_003286563.1| membrane protein [Vibrio sp. Ex25]
gi|151938448|gb|EDN57285.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262338303|gb|ACY52098.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. Ex25]
Length = 261
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 93/228 (40%), Gaps = 18/228 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ F + + + + + T LL L+ ++ L + +++LGNG
Sbjct: 34 KRKTGCFVVLFSFVGIFLVAFQPVSTKLLMPLEREHKAFLPVS---GTIDYVMVLGNGHV 90
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
I IP + S + R+ E +R+ + + + G ++ + + N
Sbjct: 91 IDDEIP-PTSQLSRAALMRLTEGIRILRMYPGAKLILS-----GYAGGSEISHARMMANV 144
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L GV + DI L + DT++ A+ +++ ++ + LV+SA H+ R+ F GI
Sbjct: 145 ALALGVAKSDIILLEDAKDTWEEARQAAAFVQQKEIV---LVTSASHMSRALYEFNAAGI 201
Query: 198 NTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +++L + P + TEL EY+G + R
Sbjct: 202 KPIPAPTNFLAISEISQPWDKYSPKARYLEQTELYWHEYLGSIWQRLR 249
>gi|269967671|ref|ZP_06181721.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827758|gb|EEZ82042.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 261
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 93/228 (40%), Gaps = 18/228 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ F + + + + + T LL L+ ++ L + +++LGNG
Sbjct: 34 KRKTGCFVVLFSFVGIFLVAFQPVSTKLLMPLEREHKAFLPVS---GTIDYVMVLGNGHV 90
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
I IP + S + R+ E +R+ + + + G ++ + + N
Sbjct: 91 IDDEIP-PTSQLSRAALMRLTEGIRILRMYPGAKLILS-----GYAGGSEISHARMMANV 144
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L GV + DI L + DT++ A+ +++ ++ + LV+SA H+ R+ F GI
Sbjct: 145 ALALGVAKSDIILLEDAKDTWEEARQAAAFVQQKEIV---LVTSASHMSRALYEFNAAGI 201
Query: 198 NTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +++L + P + TEL EY+G + R
Sbjct: 202 KPIPAPTNFLAISEISQPWDKYSPKARYLEQTELYWHEYLGSIWQRLR 249
>gi|229523809|ref|ZP_04413214.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae bv. albensis
VL426]
gi|229337390|gb|EEO02407.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae bv. albensis
VL426]
Length = 282
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L + + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFLPVE- 85
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG I IP E + + R+ E +R+ + + + G
Sbjct: 86 --GTLDYVMVLGNGHVIDDDIP-PTSELTRAALMRLTEGIRISRMYPGSKLILS-----G 137
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + D ++ A+ +++ ++ ++LV+S
Sbjct: 138 YAGGSEVSHARMMARVALALGVPKSDIILLETAKDAWEEARQAAAFVQQK---RMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G++
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLMW 254
Query: 236 AYYR 239
R
Sbjct: 255 QTLR 258
>gi|170749150|ref|YP_001755410.1| hypothetical protein Mrad2831_2743 [Methylobacterium radiotolerans
JCM 2831]
gi|170655672|gb|ACB24727.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 281
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 12/243 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ I L ++ + + L G + + L L+ + P
Sbjct: 20 IFAILLGIAVAAVTRWRRSGLGLALLGSFLLGAAGLAPLSDVALIPLEQRFPA---YPDD 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
I++LG G + +I + + R L + + + G
Sbjct: 77 GPAPTGIIVLGGGIEAGLSEARRQIVVN-DAGERPIYLGDLARRYPAARL---VFSGGSG 132
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G+AE+ + + + GV R + LE +S +T +NA FS++++K G+ +LV+SA
Sbjct: 133 FIAGGMAEADIVSRQADVIGVPRTRLILENRSRNTHENAAFSAALVKPKPGERWLLVTSA 192
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-----SANFYLTELALKEYIGILIAY 237
+H+ R+ F+ G A DY +S + S +LA+KE+IG++
Sbjct: 193 WHMPRAVGCFRQAGFAVDAFPVDYRTRGWSDVAHFHGFASDGLLQFDLAVKEWIGLVAYR 252
Query: 238 YRG 240
G
Sbjct: 253 LSG 255
>gi|182416277|ref|YP_001821343.1| hypothetical protein Oter_4472 [Opitutus terrae PB90-1]
gi|177843491|gb|ACB77743.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 263
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 115/237 (48%), Gaps = 4/237 (1%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ ++ L + + + + +F +G G + L + LQ PQ
Sbjct: 23 LILLFVAGIAAVAALRRWDTVLSLATGCVAVFILVGNGFLARWLARSLQE--PAFFRKPQ 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++IVLLG+G + P + P + +YSRI LY+S C +I++G
Sbjct: 81 DFGGVSVIVLLGDGNIVQPN--SGEALPGWLAYSRIERAGELYRSATASGAACRVIVTGD 138
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D G + VY +L GV DI++E + +T++ A+ +S ++K + I +V+S
Sbjct: 139 DSSDPGAVKEPVYVQRLRALGVPAGDIRVEGKGRNTYRQAELTSEILKAERCDRIFMVTS 198
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H+KR+ YF +FG++ SDY+ +++PL +NF + ++AL +Y G+
Sbjct: 199 GLHMKRALRYFLNFGVSAIPVASDYVTGNITLLPLGSNFAIADIALHQYAGLARLRI 255
>gi|268590146|ref|ZP_06124367.1| putative membrane protein [Providencia rettgeri DSM 1131]
gi|291314421|gb|EFE54874.1| putative membrane protein [Providencia rettgeri DSM 1131]
Length = 275
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 99/248 (39%), Gaps = 19/248 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL--LS 59
++ +I L++ ++ + + F + ++L + +G + LL + + + ++
Sbjct: 21 IIGFIGLLLLWFTRWQRCGKA--FTTLSLVLITLLGLQPVSDTLLAPAEKQFNKRYELIT 78
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+D IV+LG G T P + S R+ E +RLY +I
Sbjct: 79 ENPPQDVRYIVVLGGGFTYNPD-WSPSSNLLNNSLPRVTEGVRLYLKHPGSK-----LIF 132
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G ++ + V GV D T+ DT + A +I +LV
Sbjct: 133 TGGKASSPISSAEVAAQVAQSLGVPAQDTIPLTEPKDTQEEAYEVEKIIGK---SPFLLV 189
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGI 233
+SA HL R+ F G+N + ++ L N + IP S F +E A E++G
Sbjct: 190 TSANHLPRAMTMFTQRGMNPFPAPANQLVITSEINPWEKYIPSSYYFGHSERAWYEFLGT 249
Query: 234 LIAYYRGN 241
L + + N
Sbjct: 250 LWWHLKPN 257
>gi|300312530|ref|YP_003776622.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
gi|300075315|gb|ADJ64714.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
Length = 269
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 86/227 (37%), Gaps = 14/227 (6%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + + + +L+ L+ SY + IV+LG+G
Sbjct: 52 RWRRFGLLLIVLGVATLLVLSTRVGSLLLIAPLENSYP----VLRSPGQAQAIVILGSGR 107
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + R+ L++ I+++GG+P +E+ V
Sbjct: 108 IDRAPEYGGLDDANAIGMKRLQYGAYLHRQ-----SGLPILVTGGNPDGSPESEAAVMAR 162
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L E +S T+ NA S++M+K I+LV+ + H+ R+ F G
Sbjct: 163 TLERDFAVPVR-WQEGRSNTTYDNATLSAAMLKEAGISRILLVTDSLHMPRAMQVFATTG 221
Query: 197 INTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +A+ + + +P +A+ L AL+E+IG L R
Sbjct: 222 LQVQAAPTVFAGQARTRVTDYLPNAASLQLASYALREWIGQLWYRVR 268
>gi|163802067|ref|ZP_02195963.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio sp. AND4]
gi|159174208|gb|EDP59016.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio sp. AND4]
Length = 268
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 18/230 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ F + + + + + T LL L+ Y+ L + +++LGNG
Sbjct: 34 KRKTGCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFLPVS---GSIDYVMVLGNGHV 90
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ IP + S + R+ E +R+ + + + G ++ + + N
Sbjct: 91 VDNEIP-PTSQLSRTALMRLTEGIRILRMYPGAKLILS-----GYAGGSEISHARMMANV 144
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L GV + DI L + DT++ A+ +++ +K LV+SA H+KR+ F GI
Sbjct: 145 ALSLGVAKSDIILLEDAEDTWEEARQAAAFVKQKDIV---LVTSASHMKRALYEFHAAGI 201
Query: 198 NTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ ++++ ++ P + TEL E++G L R N
Sbjct: 202 KPIPAPTNFMAIDEIEQSWQKYAPKARYLEQTELYWYEFLGGLWQKLRDN 251
>gi|91228201|ref|ZP_01262183.1| hypothetical protein V12G01_20638 [Vibrio alginolyticus 12G01]
gi|91188190|gb|EAS74491.1| hypothetical protein V12G01_20638 [Vibrio alginolyticus 12G01]
Length = 261
Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 93/228 (40%), Gaps = 18/228 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ F + + + + + T LL L+ ++ L + +++LGNG
Sbjct: 34 KRKTGCFVVLFSFVGIFLVAFQPVSTKLLMPLEREHKAFLPVS---GTIDYVMVLGNGHV 90
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
I IP + S + R+ E +R+ + + + G ++ + + N
Sbjct: 91 IDDEIP-PTSQLSRAALMRLTEGIRILRMYPGAKLILS-----GYAGGSEISHARMMANV 144
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L GV + DI L + DT++ A+ +++ ++ + LV+SA H+ R+ F GI
Sbjct: 145 ALALGVAKSDIILLEDAKDTWEEARQAAAFVQQKEIV---LVTSASHMSRALYEFNAAGI 201
Query: 198 NTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +++L + P + TEL EY+G + R
Sbjct: 202 KPIPAPTNFLAIREISQPWDKYSPKARYLEQTELYWHEYLGSIWQRLR 249
>gi|254490468|ref|ZP_05103654.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
gi|224464212|gb|EEF80475.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
Length = 276
Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 44/224 (19%), Positives = 91/224 (40%), Gaps = 12/224 (5%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+I + + L+ L+ + P P + + I++LG +
Sbjct: 42 RRIITLMSLAGFSMLA--YPVSDYLMYPLETRFALPEDLPD---NVDGIIVLGGAEKLKL 96
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
++ + E ++ RI + L + + T + Q + V L +
Sbjct: 97 SMSWKQAEVG-EAAERILKAAELSRRYPDVPVIYTGGSNLVQMQNLD-TQGSVSQTLLTQ 154
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+G+++ + +ETQ+ +T +N + ++ QG ILV+SA+H+ RS + GI+
Sbjct: 155 AGIDKQRLIIETQARNTAENFFYIKPLLPKQQGN-YILVTSAFHIPRSVGIARKLGIDVI 213
Query: 201 ASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
DY ++ Y L + + E A E++G+ + G
Sbjct: 214 PYPVDYRSSRPDERYWDFDLFDHLQVLEPAWHEWLGLTAYFVTG 257
>gi|78188131|ref|YP_378469.1| hypothetical protein Cag_0148 [Chlorobium chlorochromatii CaD3]
gi|78170330|gb|ABB27426.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 251
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 17/245 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L + + + L +RK + L+ + L+ ++ R + P
Sbjct: 13 LPLGVVLIAIIVGTL----VRKQVLLWYAALVLWAFSIPTVADGLMHFVEG--NRTVALP 66
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+LG + + R + LY++ K + T
Sbjct: 67 QTLHQADAIVVLGGMIRRVEGAAEGEW---NDAADRFEAGVTLYRAGKAPLLLFTRGRMP 123
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ E + + L+ GV + L +T A + +++ + IILV+
Sbjct: 124 --WSPDAVPEGELLVERALQRGVPEAALGLTAPVANTEDEAADVARLLRERGAERIILVT 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SAYH++RSQL F+H G++ + D+ A P + Y +E AL+E IG L
Sbjct: 182 SAYHMRRSQLLFEHTGLSVEPYPVDFRVDSYPEPAVLRFAPSAEALYRSETALRELIGWL 241
Query: 235 IAYYR 239
+
Sbjct: 242 YYRVK 246
>gi|59713611|ref|YP_206386.1| inner membrane protein [Vibrio fischeri ES114]
gi|197337496|ref|YP_002158026.1| integral membrane protein [Vibrio fischeri MJ11]
gi|59481859|gb|AAW87498.1| conserved inner membrane protein [Vibrio fischeri ES114]
gi|197314748|gb|ACH64197.1| integral membrane protein [Vibrio fischeri MJ11]
Length = 287
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 94/245 (38%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ +I L++ + F ++ +L + + I T LLK + Y
Sbjct: 19 LLIGFIGLLIL--WFSKRKGFASFLLTLSLLGIFLLSFQPITTPLLKSTERIYPSF---I 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +++LGNG + I I E S + R+ E +R+Y+ M +
Sbjct: 74 APETPVEYVLVLGNGHVVDDEISPI-SELSRAAVMRLTEGIRIYRMYPGSKMILS----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ + + L GV++ DI L + DT + A + + + LV+
Sbjct: 128 GYNGGTTVSHARMMARVALSLGVQKSDILLLESARDTHEEAIQTFNSVGKSTLV---LVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G++ + ++Y + P + +E E +G
Sbjct: 185 SASHMPRAMSEFHQLGMDPVPAPTNYLAHSEVKQPWDKYAPKAKYLEQSERFWYEQMGRW 244
Query: 235 IAYYR 239
+
Sbjct: 245 FMQLK 249
>gi|332184005|gb|AEE26259.1| putative exported protein [Francisella cf. novicida 3523]
Length = 228
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 14/236 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +FLI + +F+ +++ IG GI+ +IL L+ +
Sbjct: 7 IGCLFLIALVIACILSKGYLRYFIVAITIIYYLIGNGILGSILAIPLKSE----STDIKA 62
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I+LLG G +++P+ +Y RI +T +Y Q IIISGG
Sbjct: 63 CANTKGIILLGAGIN----QAFGKLQPALSAYDRILKTAEVYHQYPQQ-----IIISGGA 113
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P +E+ +Y + L + G+ + I LE S +T+QNA+F M+ + + LV+S
Sbjct: 114 PFGEKSSEAEIYADVLYKLGIPKSKIILEKNSKNTYQNAEFIKKMLVDDKITYC-LVTSG 172
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H KR+++ F F INT + S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 173 IHYKRAKIIFDKFAINTISIASSKFVPNIKILPNAYNFYITQNIIHEYLGIVKIYL 228
>gi|209551623|ref|YP_002283540.1| hypothetical protein Rleg2_4052 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537379|gb|ACI57314.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 262
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 15/246 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L ++ + LL + + L+ + ++++ L+ + +P P
Sbjct: 17 LAFFLVFLALVAGLLRWRTLSMLSATGSALILFVTLYTTAGNLMMQGLEQRFAKPAADPD 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LG G IE + + R E +RL + Q I++SGG
Sbjct: 77 SLQ---CMIVLGGGFENEVNTARHGIEFNA-AADRFVEALRLAQKFPQS----RILVSGG 128
Query: 122 DPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
D G+ E GV +D + E QS TF+NA + + + N +L+
Sbjct: 129 DGSLSGIYEGDAAASERFFPLFGVGKDRLIEERQSRTTFENAVNTKEFLASQGLANCLLI 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGIL 234
+S +H+ RS F+ GI+ +DY A + N A++E+ G++
Sbjct: 189 TSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGRVKAGLDFTQPNLNAQNMATAIREWYGLV 248
Query: 235 IAYYRG 240
Y G
Sbjct: 249 GYYLAG 254
>gi|294140297|ref|YP_003556275.1| hypothetical protein SVI_1526 [Shewanella violacea DSS12]
gi|293326766|dbj|BAJ01497.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 247
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 93/224 (41%), Gaps = 12/224 (5%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++ M++ F+ + +L L+ Y ++ + ++++LG+G
Sbjct: 31 RNRKLVRSVLAVAMVILVFLSSSVGSNLLTASLENQY---KVNNKAISADCLVMVLGSGH 87
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ S + +R+ E +R YK K C +I+SG + +
Sbjct: 88 D-DAVPGGAVHKLSTTALARLTEGVRQYKLGK----DCKLIVSGWGGSASKTPHAKIMAE 142
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ G+ ++ I + DT + AQ+ + N + LV+SA H+ RS F G
Sbjct: 143 AALQFGIPKERIITFPLAKDTIEEAQYFKWDVGNYPFR---LVTSASHMPRSMAIFHSQG 199
Query: 197 INTKASCSDYLNAY-YSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +A+ +D++ Y + N ++ A+ EY+G L +
Sbjct: 200 LRPQAAPTDFITRQGYWWQLDANNLLSSQRAIHEYVGRLWFKLK 243
>gi|238920331|ref|YP_002933846.1| hypothetical protein NT01EI_2441 [Edwardsiella ictaluri 93-146]
gi|238869900|gb|ACR69611.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 276
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 87/239 (36%), Gaps = 18/239 (7%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
L ++ + +S L + + LL L+ Y +
Sbjct: 36 LGLALLWFTRRQRIGKVLVSLAWLGILLLSMQPLADRLLAPLENRYP----TLNGPHQAR 91
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+V+LG G T P A S R+ E +R Q +I +G Q +
Sbjct: 92 YVVVLGGGYTYNP-QWAPSSNLIGNSLPRVTEGIRQLALNPQ----AQLIFTGAAAQGNP 146
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
L+ + V GV+ I + DT Q A+ + ++ N ILV+SA H+ R
Sbjct: 147 LSSAEVAAQVARSLGVDEQRIIVLDSPRDTGQEARAVAGVVGNAPL---ILVTSANHMPR 203
Query: 188 SQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +F H G++ + ++ LN + +P +E A E +G L G
Sbjct: 204 ALGFFHHQGLDPIPAPANQLAIASPLNPWERWLPSPLYLGHSERAGYETLGRLWQALTG 262
>gi|117923765|ref|YP_864382.1| hypothetical protein Mmc1_0451 [Magnetococcus sp. MC-1]
gi|117607521|gb|ABK42976.1| protein of unknown function DUF218 [Magnetococcus sp. MC-1]
Length = 230
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 90/233 (38%), Gaps = 8/233 (3%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+++++ + F + ML + ++++L+ Q
Sbjct: 1 MLLAFLCMRRWPKLARFTLVLAMLALYLQSAPWVSEAMIQYLESKTQALNPQRAAADPAQ 60
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG G S +R+ LY++ I+++GG P
Sbjct: 61 LTVVLGCGRYPEAPEYGGVDTLSTCGLARVRYGAYLYRA-----TGRPILVAGGAPYGEQ 115
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ L E + E S +T++NA+ S++++K +I LV+ A + R
Sbjct: 116 RSEADAMAEVL-EREFRIPVMFREGGSRNTWENAKNSAAILKREGLTHIFLVTHAKDMSR 174
Query: 188 SQLYFQHFGINTKASCSDYLN-AYYSIIP-LSANFYLTELALKEYIGILIAYY 238
+ F+ GI + + + + +P L NFY AL E +GIL
Sbjct: 175 AAWAFREQGIQVTEAPTLFKTKSPAWPLPYLPDNFYEFRWALHELVGILYYRL 227
>gi|149925438|ref|ZP_01913702.1| Uncharacterized ACR, COG1434 family protein [Limnobacter sp.
MED105]
gi|149825555|gb|EDM84763.1| Uncharacterized ACR, COG1434 family protein [Limnobacter sp.
MED105]
Length = 274
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 96/243 (39%), Gaps = 9/243 (3%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + + L + ++ + L + LL L+ +
Sbjct: 28 LWIALTVFAGLGLFGRGQWRVHLLVLAQLQLLAFSLPWVGDSLLGRLEDEALVLEANRPL 87
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G + + + R+++ RLYK + + D
Sbjct: 88 PAQVDAIVVLGGGLEGRFDGVRALPDLN-DAGDRVWQGARLYKQGVATRIVLSGGQFQTD 146
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P+K AE+ +L+ GV D + +E S TF+NA + ++ ++I LV+SA
Sbjct: 147 PRKE--AEAPGMKMFMLDMGVPEDALVIEDNSRTTFENAVRTRELLGERA-RSIALVTSA 203
Query: 183 YHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAY 237
+H+ RS L+F+ G +D A++ +P + +A+KEY+G L
Sbjct: 204 FHMGRSVLWFEKAGFTVYPVRTDIRVLNESRAFWEWLPKPQALDESTVAIKEYLGRLQLK 263
Query: 238 YRG 240
G
Sbjct: 264 VSG 266
>gi|71280901|ref|YP_268732.1| hypothetical protein CPS_2002 [Colwellia psychrerythraea 34H]
gi|71146641|gb|AAZ27114.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 254
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 103/248 (41%), Gaps = 21/248 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQS--IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
M ++ + L++ + ++ + + I +S +++ + ++ ++ Y
Sbjct: 15 MPINIVLLLLIFALVVHRKKPKQSIKSLSTAIVILLISAFAPFSDTVMTAIENDYPP--- 71
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + IV+LG G +P + + S R+ E +R+Y+ + II
Sbjct: 72 YVKTNVSVDYIVVLGCGHNTNAELP-VTSQLKTCSLQRMVEAVRIYQLHPEAR-----II 125
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+ G + ++ + L+ GV I E + + + +QG +IL
Sbjct: 126 TSGYGGHNPVSNAETVKQSLILLGVPAQKIITENFPK---DTEEEAQLIAPRVQGTQVIL 182
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL-------NAYYSIIPLSANFYLTELALKEYI 231
V++A H+ RS YFQ GI A+ + Y ++ IP S T +A E +
Sbjct: 183 VTNADHMPRSINYFQAEGIYPIAAPTGYWVKNPDSSKSWVHYIPTSKKLEQTTIAWYESL 242
Query: 232 GILIAYYR 239
G+++ +++
Sbjct: 243 GLIVQWFK 250
>gi|127512358|ref|YP_001093555.1| hypothetical protein Shew_1429 [Shewanella loihica PV-4]
gi|126637653|gb|ABO23296.1| protein of unknown function DUF218 [Shewanella loihica PV-4]
Length = 246
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 94/240 (39%), Gaps = 14/240 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ LS + L ++ L + K F +L L L+ Y ++
Sbjct: 15 IPLSVLCLFIAILILRRRKFVKALITLSFTILL-LASSQWGSHQLTAPLEGQYP---VNN 70
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ ++++LG+G ++ S + +R+ E +R + ++
Sbjct: 71 DPIENACVVMVLGSGHDSTI-ADRATLQLSATALARLTEGVRQLSLGQDCQ-----LVVS 124
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++ V N +E GV + I + DT + AQF I LV+
Sbjct: 125 GWGGSDAVPQAQVMANAAIELGVNPERIIKFPLAKDTLEEAQFLKWEIG---DSPFRLVT 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA HL R+ + F G++ + + +D++ Y + N ++ ++ EY+G +
Sbjct: 182 SATHLPRAMMIFHQAGMHPQGAPADFIARGGYWWQLDARNLLASQRSIHEYVGQTWLKIK 241
>gi|320530702|ref|ZP_08031746.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
gi|320136989|gb|EFW28927.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
Length = 258
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 16/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ ++ + Q ++ +F + G + + + L+ +Y P
Sbjct: 24 IFILALAAIAVYLWRRQVKAAAGILAAIAAVFYLLTTGAVADLFMGSLERTYPVPE---- 79
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
G++I++LG G + SR+ +RL++ I++SGG
Sbjct: 80 -HPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRLHRLY-----GLPILLSGG 133
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K E+ + L+ GV + I E++SL T QNA++S+ ++ + ILV+S
Sbjct: 134 QVFKDTGTEAEIARRVLISLGVPEEQIYTESESLTTRQNARYSAEILHREGFTHPILVTS 193
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGILI 235
A+HL R+ L F+ GI SD+ +P + F L+E + +
Sbjct: 194 AFHLPRAVLNFEKLGIEVTPYPSDFWVPAHPHLNPLKFVPSVSPFQTNITFLREELRTFV 253
Query: 236 AYY 238
Y
Sbjct: 254 TRY 256
>gi|253990291|ref|YP_003041647.1| hypothetical protein PAU_02815 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781741|emb|CAQ84904.1| similar to inner membrane protein ycbc of escherichia coli
[Photorhabdus asymbiotica]
Length = 278
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 86/235 (36%), Gaps = 18/235 (7%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR--PLLSPQWKKDGNIIV 70
W Q K ++ L + I LL L+ Y + S + IV
Sbjct: 31 WFTRWQKTGKTI-LTFSWLALLLLSLQPIADKLLLPLESIYAKGYQSESSDINPPVDYIV 89
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G T P A S R+ E +RLY M T G + +
Sbjct: 90 VLGGGFTYNPN-WAPSSNLLSNSLPRVTEGIRLYHLNPGSKMVFT-----GGKGTNSKSS 143
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ V GV +D T+ +DT Q A +I ILV+SA H++R+
Sbjct: 144 AEVAAMVAQSLGVPAEDTIALTEPMDTEQEAHEVEKLIGKHSF---ILVTSANHMQRAIT 200
Query: 191 YFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+FQ G+N ++ L+ + +P S +E A E +G + +
Sbjct: 201 FFQQQGLNPIPGPANQLAITSPLHPWEKYLPSSYYLSHSERAWYEILGTIWQRIK 255
>gi|148977536|ref|ZP_01814115.1| hypothetical protein VSWAT3_23004 [Vibrionales bacterium SWAT-3]
gi|145963187|gb|EDK28454.1| hypothetical protein VSWAT3_23004 [Vibrionales bacterium SWAT-3]
Length = 284
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 97/243 (39%), Gaps = 18/243 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L FL ++ + + I + + + LL ++ + L
Sbjct: 19 LILAFLGLALVMFTTKRKTGCLITLSALCGIFLIAFQPVSSQLLMPMERQHTAFLPV--- 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +++LG+G + IP E S R+ E +R+ + + + G
Sbjct: 76 DETVDYVMVLGSGHVVDDQIP-PTSELSRTGLMRLSEGIRILRLYPGAKLILS-----GY 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++ + + L GV + DI L + DT++ A+ +++ +KN + ++LV+SA
Sbjct: 130 GAGTEVSNARMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKNKR---MVLVTSA 186
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R+ F G+ + ++YL + +P + TE E +G++
Sbjct: 187 SHMTRALNEFNAAGMKPLPAPTNYLAQEGIVEPWNKYMPKAIYLEQTERYWHETMGLVWQ 246
Query: 237 YYR 239
R
Sbjct: 247 SLR 249
>gi|256830641|ref|YP_003159369.1| hypothetical protein Dbac_2878 [Desulfomicrobium baculatum DSM
4028]
gi|256579817|gb|ACU90953.1| protein of unknown function DUF218 [Desulfomicrobium baculatum DSM
4028]
Length = 260
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 16/247 (6%)
Query: 1 MLLSW---IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M LS +F + + LL +S I LL + L++ L+ +Y
Sbjct: 18 MPLSVCLVLFALGLLYVLLRRSKDAIAPFVMGGLLLYAFSLNSVSGYLIRPLENAYPPLN 77
Query: 58 LSPQW--KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
LS KK +V+LG+G +P + + R+ E +R+
Sbjct: 78 LSNAEIVKKPVKWVVVLGSGHWTDQRLPPGAM-LEEAALYRLNEGIRVANRFPGA----- 131
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I++ G K + + V ++ G I L Q+LDT A ++ +
Sbjct: 132 ILVLSGGKFKDEQSNAQVMAAAAVDLGFNPGRIMLSDQALDTHDEAMRIKALAGSDLFV- 190
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLN--AYYSIIPLSANFYLTELALKEYIGI 233
LV+SA H+ R+ F++ G+ + + Y + +P + N +A+ EY+G+
Sbjct: 191 --LVTSASHMLRAVKLFENQGLKPIPAPTCYQSKGEPEYFLPRADNIKTCHMAVHEYLGL 248
Query: 234 LIAYYRG 240
++ RG
Sbjct: 249 AWSFVRG 255
>gi|254506071|ref|ZP_05118215.1| integral membrane protein [Vibrio parahaemolyticus 16]
gi|219550889|gb|EED27870.1| integral membrane protein [Vibrio parahaemolyticus 16]
Length = 268
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 92/222 (41%), Gaps = 18/222 (8%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
F + + I + + + LL L+ Y + + +++LG+G + IP
Sbjct: 40 FIVLFSFIGMFLIAFQPVSSRLLMPLERQYSAFFPV---DESIDYVMVLGSGHVVDDKIP 96
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
E S R+ E +R+ + + + G ++ + + L GV
Sbjct: 97 -PTSELSRTGLMRLAEGIRVMRIYPGSKLILS-----GYSGGSDISNARMMAKVALALGV 150
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ DI L + DT++ A+ +++ +K+ + +++V+SA H+KR+ F G+ +
Sbjct: 151 SKSDIILLETAKDTWEEARQAAAFVKHKK---MVVVTSASHMKRALNEFHSAGLKPYPAP 207
Query: 204 SDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++YL + P + TE E +GIL R
Sbjct: 208 TNYLAHDNVTEPWSKYTPKAVYLEQTERYWHETLGILWQKLR 249
>gi|311105207|ref|YP_003978060.1| hypothetical protein AXYL_02016 [Achromobacter xylosoxidans A8]
gi|310759896|gb|ADP15345.1| hypothetical protein AXYL_02016 [Achromobacter xylosoxidans A8]
Length = 254
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 90/245 (36%), Gaps = 14/245 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + +I L + +L L L+ Y P L+P
Sbjct: 16 LCVTLVVIGLVLGLFRLRKTGGALIVAGLLWALAWSLPATSLWLGGALESRY--PHLAPS 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV+LG T + + R+ +LY + + + + G
Sbjct: 74 ESPTADAIVVLGGNTANGRANWFLPYDKDTAVV-RVDTAAQLYLAGRAPKVLLSGGALEG 132
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D ++E+ + + + GV + LE S T++NA + +K+ ++LV+S
Sbjct: 133 D-----VSEARGMAHAIRQQGVPETALILENSSRTTYENAALTEDQLKSRGIGKVLLVTS 187
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+ R+ F G+ A+ + + +P F + +KEY G+ +
Sbjct: 188 ALHMPRAMAAFSKQGVEAVAAPAPPQIVAPADGSLPLWLPDQRTFDASRSIIKEYAGLFV 247
Query: 236 AYYRG 240
+ RG
Sbjct: 248 YWLRG 252
>gi|238753514|ref|ZP_04614877.1| hypothetical protein yruck0001_20440 [Yersinia ruckeri ATCC 29473]
gi|238708467|gb|EEQ00822.1| hypothetical protein yruck0001_20440 [Yersinia ruckeri ATCC 29473]
Length = 259
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 85/233 (36%), Gaps = 19/233 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q KI ++ L+ I + LL ++ Y + + IV+L
Sbjct: 31 WFTRWQKSGKI-LITISCLVLLLISLQPVADRLLLPIENKYA----TYHGHDRVDYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T P A S R+ E +RLY ++ +GG + +
Sbjct: 86 GGGYTFNPN-WAPSANLFPNSLPRVTEGIRLYLQQP----GSKLVFTGGSGPDGVQSSAR 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
GV DI + DT + A + ++ N LV+SA HL R+ +F
Sbjct: 141 TAAGVAESLGVPVTDIIALEKPKDTEEEAAEVALLVGNKPFL---LVTSANHLPRAIKFF 197
Query: 193 QHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G+ + ++ L+ + I P + +E A E +G L + +
Sbjct: 198 TDNGMQPIPAPANQLAVTTPLHNWERIFPSANALSHSERAWYETLGRLWQWIK 250
>gi|187923614|ref|YP_001895256.1| hypothetical protein Bphyt_1622 [Burkholderia phytofirmans PsJN]
gi|187714808|gb|ACD16032.1| protein of unknown function DUF218 [Burkholderia phytofirmans PsJN]
Length = 262
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 10/243 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + L + L + R + + GW P + L + +P
Sbjct: 25 ILFTLLALFFAAIVLWKGARRPLAIFTVAFFWLLAAGWLTAPLLRLAQPHWR----TEAP 80
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I++LG GT + P +RI + Y +CK+ + C +I+SG
Sbjct: 81 ATFAPRTAIIMLGGGTIYGAGQ---VLMPPRDVLARIAASAEYYAACKRAADICHVIVSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE +SL T++NA+ S ++ + ++IL++
Sbjct: 138 GNPQRHRATEADTYLPYLLRRQVPRADIVLENRSLTTYENARNVSGIVHGSRYDSLILIT 197
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
SAY + R+ L F FG+ + S+ + A ++P N E+AL E IGI +
Sbjct: 198 SAYQMPRALLDFHRFGLTPQPMISNAIGARLGVLPRYDNLASAEIALHELIGIAQFHVYR 257
Query: 238 YRG 240
G
Sbjct: 258 AIG 260
>gi|313681413|ref|YP_004059151.1| hypothetical protein Sulku_0284 [Sulfuricurvum kujiense DSM 16994]
gi|313154273|gb|ADR32951.1| protein of unknown function DUF218 [Sulfuricurvum kujiense DSM
16994]
Length = 248
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 94/243 (38%), Gaps = 16/243 (6%)
Query: 2 LLSWIFLIVSYWHL-LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ I ++ + L R + + + +LLK L+ +Y + L
Sbjct: 16 PIFLISSALALYLLQRGNRRRAKILFVFSFAWITILSYPPFSALLLKPLENAYPKVQLHS 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I +LGNG T IP R+ E + LYKS +I
Sbjct: 76 PFPR---YIHVLGNGHTSSQNIPLSSELSLTSLA-RVNEGILLYKSHPGMK-----LIFS 126
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ + + + GV +DI + ++ DT + A ++ + ILV+
Sbjct: 127 GYGGGDSVSNARKNSQLAIALGVNSNDIVILEEAKDTAEEAIAVKKIVGSQPL---ILVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAY---YSIIPLSANFYLTELALKEYIGILIAY 237
SA H+ R+ F+ GI + +D+L P S +E A EY+G+L
Sbjct: 184 SASHMVRASSIFRKNGICVIEAPTDFLVKKEDTLWQFPSSGGLRRSECAFHEYLGLLWEK 243
Query: 238 YRG 240
+G
Sbjct: 244 LKG 246
>gi|189500837|ref|YP_001960307.1| hypothetical protein Cphamn1_1910 [Chlorobium phaeobacteroides BS1]
gi|189496278|gb|ACE04826.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides
BS1]
Length = 251
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 99/244 (40%), Gaps = 17/244 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + L++ L + + ++L + I L++ ++ +
Sbjct: 13 LPIGLGILVLVIGALFRKW----IVVWLGIVLLWVLSMPITGDWLMRQIEG--VETRVVV 66
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + G+ +V+LG +P++R ++ R + ++++ K +
Sbjct: 67 ESLEQGDAVVVLGGVLWQ---VPSVRYGEWGEAADRFEGGVEVFRAGKAPLLIFMGAKMP 123
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
E + + + GV + +++ + +T A+ ++ ++ +ILV+
Sbjct: 124 --WMPDTRPEGEILAERAIRLGVPEEAVRVTERVGNTADEARAVKELLAGIERPEVILVT 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGIL 234
SA+H+ R+ + F++ GI + D+ +YY +P + +E+A+KE +G L
Sbjct: 182 SAFHMNRASMLFRNAGIEVQPFPVDFRTSYYNELTLIDFLPSADGVENSEIAMKEMLGTL 241
Query: 235 IAYY 238
Sbjct: 242 YYKV 245
>gi|86146468|ref|ZP_01064791.1| hypothetical protein MED222_12673 [Vibrio sp. MED222]
gi|85835731|gb|EAQ53866.1| hypothetical protein MED222_12673 [Vibrio sp. MED222]
Length = 268
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 100/245 (40%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+++ L + + + + I + + + LL ++ + L
Sbjct: 19 LILAFLGLALVMFTA--KRKTGCLITLSALCGIFLIAFQPVSSQLLMPMERQHTAFLPID 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G + IP E S R+ E +R+ + + +
Sbjct: 77 DT---VDYIMVLGSGHVVDDQIP-PTSELSRTGLMRLSEGIRILRLYPGAKLILS----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ + + L GV + DI L + DT++ A+ +++ +KN + ++LV+
Sbjct: 128 GYGAGTEVSNAKMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKNKK---MVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+ + ++YL + +P + TE E +G++
Sbjct: 185 SASHMTRALNEFNAAGMKPLPAPTNYLAQEGIVEPWNKYMPKAIYLEQTERYWHETMGLV 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQSLR 249
>gi|229141535|ref|ZP_04270069.1| hypothetical protein bcere0013_46290 [Bacillus cereus BDRD-ST26]
gi|228641935|gb|EEK98232.1| hypothetical protein bcere0013_46290 [Bacillus cereus BDRD-ST26]
Length = 277
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 101/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +FL +S + IF + ++ FI + L + + + RP
Sbjct: 40 ILFCILFLFISPASFFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQATVNTPPTIIFSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++
Sbjct: 143 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYKSI 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 203 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIIV 249
>gi|293604449|ref|ZP_06686856.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292817326|gb|EFF76400.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 254
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 94/245 (38%), Gaps = 15/245 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI-GWGIIPTILLKHLQFSYQRPLLSPQ 61
L +I+ + + + LL++ + L L+ Y P L+P
Sbjct: 16 LCVTLVIIGLALGWFRLRKTGAAIIAAGLLWALAWSLPVTSLWLGGALENRY--PHLAPA 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV+LG T + + R+ +LY + + + + G
Sbjct: 74 DSPTADAIVVLGGNTANGRANWFLPYDKDTAVV-RVDTAAQLYLAGRAPKVLLSGGALEG 132
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D ++E+ + + + GV + LE S T++NA + +K+ ++LV+S
Sbjct: 133 D-----VSEARGMAHAIRQQGVPESALILENSSRTTYENAALTEDALKSRGITKVLLVTS 187
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+ R+ F G+ A+ + + +P F + +KEY G+ +
Sbjct: 188 ALHMPRAMAAFSKQGVEAIAAPAPPQIVAPADGSLSPWVPDQRTFDASRSIIKEYAGLFV 247
Query: 236 AYYRG 240
+ RG
Sbjct: 248 YWLRG 252
>gi|313896016|ref|ZP_07829570.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975441|gb|EFR40902.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 258
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 16/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ ++ + Q ++ +F + G + + + L+ +Y P
Sbjct: 24 IFILALTAIAVYLWRRQVKAAAGILAAIAAVFYLLTTGAVADLFMGSLERTYPVPE---- 79
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
G++I++LG G + SR+ +RL++ I++SGG
Sbjct: 80 -HPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRLHRLY-----GLPILLSGG 133
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K E+ + L+ GV + I E++SL T QNA++S+ ++ + ILV+S
Sbjct: 134 QVFKDTGTEAEIARRVLISLGVPEEQIYTESESLTTGQNARYSAEILHREGFMHPILVTS 193
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGILI 235
A+HL R+ L F+ GI SD+ +P + F L+E + +
Sbjct: 194 AFHLPRAVLNFEKLGIEVTPYPSDFWVPAHPHLNPLKFVPSVSPFQTNITFLREELRTFV 253
Query: 236 AYY 238
Y
Sbjct: 254 TRY 256
>gi|238757630|ref|ZP_04618814.1| hypothetical protein yaldo0001_19510 [Yersinia aldovae ATCC 35236]
gi|238704135|gb|EEP96668.1| hypothetical protein yaldo0001_19510 [Yersinia aldovae ATCC 35236]
Length = 266
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 92/242 (38%), Gaps = 20/242 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+V W Q K F + L I + LL L+ Y + Q
Sbjct: 36 LALVLLWFTRWQKSGKTLF-ALSWLTLLLISLQPVADRLLLPLEKHYA----TYQGNDPV 90
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RLY++ M T G +
Sbjct: 91 DYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGIRLYRAHPNAKMVFT-----GSAGPN 144
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI Q DT + A ++++ K +LV+SA HL
Sbjct: 145 SQSSAKTAALVAESLGVPAADIIALEQPKDTVEEAAAVATLVG---DKPFLLVTSASHLH 201
Query: 187 RSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +F G++ + ++ L+ + IP + TE A E +G+L G
Sbjct: 202 RAIKFFTAKGLHPIPAPANQLAITTPLHNWERTIPAATWLVHTERAWYETLGLLWQKLTG 261
Query: 241 NR 242
N+
Sbjct: 262 NK 263
>gi|209964476|ref|YP_002297391.1| hypothetical protein RC1_1164 [Rhodospirillum centenum SW]
gi|209957942|gb|ACI98578.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 271
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 88/239 (36%), Gaps = 10/239 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L I L + L ++ + + + + +L L+ + P P
Sbjct: 19 LLLILLAGMGFLLAGWQRTGLWLAGGATVALAAVATLPVGAWMLWSLESRFPSPATLP-- 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I++LG I T + + R+ E L + + T G
Sbjct: 77 -GRVDGIIVLGGAVRPILTADRGQPALNEH-AERLTEIPALARRYPDARIVFTG--GSGL 132
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ L E+ V G + + E +S +T++NA S + ++G+ +LV+SA
Sbjct: 133 VFEQDLKEAPVARAAWERMGFDTARVLFEQESRNTWENALLSRDLAHPVEGEAWLLVTSA 192
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSI----IPLSANFYLTELALKEYIGILIAY 237
H+ RS F+ G N D+ S+ L+ AL EYIG+++
Sbjct: 193 MHMPRSVGIFRRIGWNVVPYPVDFHVPDRSLYRIGFDLTDGLRSLSYALHEYIGLVVYR 251
>gi|84388504|ref|ZP_00991051.1| hypothetical protein V12B01_06906 [Vibrio splendidus 12B01]
gi|84377053|gb|EAP93924.1| hypothetical protein V12B01_06906 [Vibrio splendidus 12B01]
Length = 284
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 97/243 (39%), Gaps = 18/243 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L FL ++ + + I + I + LL ++ + L
Sbjct: 19 LILAFLGLALVMFTTKRKTGCLITLSALCGIFLIAFQPISSQLLMPMERQHTAFLPV--- 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +++LG+G + IP E S R+ E +R+ + + + G
Sbjct: 76 DETIDYVMVLGSGHVVDDQIP-PTSELSRTGLMRLSEGIRILRLYPGAKLILS-----GY 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++ + + L GV + DI L + DT++ A+ +++ +KN + ++LV+SA
Sbjct: 130 GAGTEVSNARMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKNKR---MVLVTSA 186
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R+ F G+ + ++YL + +P + TE E +G++
Sbjct: 187 SHMTRALNEFHAAGMKPLPAPTNYLAQEGIVEPWNKYMPKALYLEQTERYWHETMGLMWQ 246
Query: 237 YYR 239
R
Sbjct: 247 SLR 249
>gi|309390074|gb|ADO77954.1| protein of unknown function DUF218 [Halanaerobium praevalens DSM
2228]
Length = 253
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 16/244 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+++FLI + + + IR ++ F+ + +L+ L+ +R L+
Sbjct: 20 IVLNFVFLIYLFKNKSSKLIR--LTAVFSLIFLIFLATAVGARVLVHPLENYAERNLVEV 77
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K IV+LG G+ A + PS S R+ + L++S K I G
Sbjct: 78 SQKYP---IVVLGGGSNY---YSAKKTTPSTHSLQRLVKGYELHRSLK----TPLIYSGG 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ ++E+ + L + G++ + ET++ TF+NA + IK Q K + L +
Sbjct: 128 VAIGQQNISEADAASEFLQDLGMDLEFYFSETKAQTTFENAAYLRKWIKQHQVKKVYLFT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCS----DYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
SAYH+ RS F+ I S ++ ++ P AL E+IG+
Sbjct: 188 SAYHMLRSMTVFKAQQIEVLPVHSGFIYNHKLSWLDYFPSRGALNANLTALHEWIGLFWY 247
Query: 237 YYRG 240
Y +G
Sbjct: 248 YLKG 251
>gi|85715468|ref|ZP_01046449.1| hypothetical protein NB311A_17224 [Nitrobacter sp. Nb-311A]
gi|85697663|gb|EAQ35539.1| hypothetical protein NB311A_17224 [Nitrobacter sp. Nb-311A]
Length = 266
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 96/243 (39%), Gaps = 11/243 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + + + ++ + G+ + +LL L +
Sbjct: 19 IALACGLGLCLTAIRWRRTGLGLLTAGIAALLIFGYSPLSNVLLLTLSERFPPWHF---D 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + I++LG ++ +E + R+ + L + + + + G
Sbjct: 76 GRAPDGIIILGGSIQPPLSVARQTVEIDG-AAERVIGGLELAQRFPEARVVYSG--GSGQ 132
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E+ + + G+ + I LE +S T++NA+FS ++ G+ +LV+SA
Sbjct: 133 LTEGSAREAPIAGSLFERFGITPERIVLENESRTTYENARFSRELVAPKPGERWLLVTSA 192
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY--SIIP---LSANFYLTELALKEYIGILIAY 237
YH+ RS F+ G + D+ + + P L+ ++A+ E++G+L +
Sbjct: 193 YHMPRSIGVFRKAGFEVEPYPVDWRTRGWIDAWRPFNRLTTGLACADIAVHEWVGLLAHW 252
Query: 238 YRG 240
G
Sbjct: 253 MAG 255
>gi|134096504|ref|YP_001101579.1| hypothetical protein HEAR3355 [Herminiimonas arsenicoxydans]
gi|133740407|emb|CAL63458.1| Conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 256
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 101/241 (41%), Gaps = 11/241 (4%)
Query: 2 LLSWIFL-IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L++I L + W + +++ + + + ++ + L+ P L
Sbjct: 18 PLNFILLCALGLWLRRRWPRGGLTLSVAALIMLTVLSTRMGASLFVHPLEKM--NPPLLS 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IV+LG G + P+ + R+ +L Q +++SG
Sbjct: 76 AKAAGAQAIVVLGGGRISNAPEYGGQDIPAAITLQRLRYAAKL-----QRETGLPLLVSG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P +E+ LL+ E S +T +NAQFSS +++ + I+LV+
Sbjct: 131 GRPDGASESEAAGMARVLLD-DFSVPVKWQEEMSNNTAENAQFSSRVLRAAGVQRILLVT 189
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP--LSANFYLTELALKEYIGILIAYY 238
A H++R+++ FQ G+ + + + +A +P L + ++ AL+E++G+
Sbjct: 190 DAIHMQRAKIAFQQAGLQVVPAATLFTSAARVTLPDFLPTSLHMASYALREWLGLAWYCL 249
Query: 239 R 239
R
Sbjct: 250 R 250
>gi|254504841|ref|ZP_05116992.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222440912|gb|EEE47591.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 268
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 54/246 (21%), Positives = 95/246 (38%), Gaps = 15/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L + LIVS L + R+ F+ L G+ +L++ L+ + RP
Sbjct: 20 IALVVVGLIVSMGTRLQKWGRR--FIWVGALGLVICGFSPAANLLIQPLEDRFSRPA--- 74
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
N +++LG + T S R+ RL K + + T
Sbjct: 75 -ELGSFNGVIILGGAVDTVVTGARGETAL-TVSGERLTIAARLAKQLPEALIIHTG--GQ 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ES + + G+ I LE +S +T++NA + ++ G+ +LV+
Sbjct: 131 GTIITGQATESEGASRLFDDFGIASQRIILEDESRNTWENAVLTKELVDPKPGQTWLLVT 190
Query: 181 SAYHLKRSQLYFQHFGIN-TKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGIL 234
SAYH+ RS F+ G A DY S ++ ++E+IG+
Sbjct: 191 SAYHMPRSMGVFEAAGWTGVTAYPVDYRTRGGADWGLGFDGASKGLRRLDIGVREWIGLT 250
Query: 235 IAYYRG 240
+ + G
Sbjct: 251 VYWMTG 256
>gi|157364443|ref|YP_001471210.1| hypothetical protein Tlet_1592 [Thermotoga lettingae TMO]
gi|157315047|gb|ABV34146.1| protein of unknown function DUF218 [Thermotoga lettingae TMO]
Length = 245
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 21/243 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+FL++ +S FM L F F G+ L+ L+ SY+
Sbjct: 18 FVTLFLLIGILQ-FKKSRNTAIFMIFLALCFYFFSSGLGALTLVLPLERSYE-----ISI 71
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + +V+LG G P +PS S R+ E +R+ +IISGG
Sbjct: 72 PKKIDAVVVLGGGIVKTPNG----YQPSQSSIVRLLEGVRIA-----KDFDSFLIISGGM 122
Query: 123 PQ-KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E++V + + G + I +E + TF+NA F+S + + +N+++V+S
Sbjct: 123 LPLLNQPPEAVVMRDLAISLGFPAEAIIIEPDAKTTFENAIFTSQICREKGFQNVVVVTS 182
Query: 182 AYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIA 236
A H+KR+ F + Y + +P A+ E IGIL
Sbjct: 183 AIHMKRAIYSFSKARFTVHPCPTGYLYNHSKLGWSDYLPNRDALTANLWAIHEIIGILWY 242
Query: 237 YYR 239
++
Sbjct: 243 RFK 245
>gi|227824083|ref|YP_002828056.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227343085|gb|ACP27303.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 261
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 53/247 (21%), Positives = 90/247 (36%), Gaps = 14/247 (5%)
Query: 2 LLSWIFLIVS---YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
LS F + L F S +++ + L+ L+ + RP
Sbjct: 14 PLSLAFFSILVGMLLILARFHRSGGVFASLGLIVLFLSLFTTTGPYFLQMLEDRFPRPSP 73
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P I++LG + +E + Q+ R E +RL K+ + +
Sbjct: 74 PPAEIA---CIIVLGGAFENVVIASRGGMEFN-QAADRFVEAVRLAKAYPAARILVSG-- 127
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G ++ G+ D + E S TF+NA+++ ++ + L
Sbjct: 128 GDGSISGAYEGDARASQGFFNAFGIGADRVIREEDSRTTFENARYTKDLLAANGLERCAL 187
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ RS F+ GI +DY + + S N L A KE+ G+
Sbjct: 188 VTSAYHMPRSVGLFRANGIAVVPWPADYRTSGKVRLGFDFSQPSLNAQLATTAAKEWTGL 247
Query: 234 LIAYYRG 240
L Y G
Sbjct: 248 LAYYLLG 254
>gi|306841899|ref|ZP_07474579.1| Hypothetical protein BIBO2_1680 [Brucella sp. BO2]
gi|306288029|gb|EFM59431.1| Hypothetical protein BIBO2_1680 [Brucella sp. BO2]
Length = 205
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 11/202 (5%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+LL L+ + + PQ + IV+LG E + + RI ETMRL
Sbjct: 1 MLLSPLENRFPKSESLPQH---VDGIVVLGGYMNGEIVAGRQNFELN-SAADRIVETMRL 56
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
+ + + G + E+ L + G D E +S +T +NA F
Sbjct: 57 ARLYPDAKIIVSG--GEGTFFEKSAREAETTRALLSDLGFSGDRYIFEGKSRNTVENAIF 114
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSA 218
S ++ G+ +LV+SAYH+ R+ F+ G + A DY + +
Sbjct: 115 SQALALPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPND 174
Query: 219 NFYLTELALKEYIGILIAYYRG 240
+AL+E+ G+ ++ G
Sbjct: 175 ALSRFSMALREWTGLAAYWWTG 196
>gi|91203844|emb|CAJ71497.1| conserver hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 263
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 25/256 (9%)
Query: 1 MLLSWIFLIVSYWHLL--CQSIRKIFFMSCFMLLFSFIGWG-IIPTILLKHLQFSYQRPL 57
+ L LIV + + R + + +LLF+F + + + ++ L++ Y L
Sbjct: 15 VPLCLEILIVGAVLMFFSRKQKRGKYIVLSGILLFAFFCYSSPVSKVFIRRLEYKYPPLL 74
Query: 58 LSPQWK-------KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ IV+L G T P IP I S ++ R+ E +RL++ +
Sbjct: 75 SIQSSDDTRGAIVPEVKWIVVLAGGHTSDPDIP-ITSRVSGETLVRLAEGIRLHRLVPES 133
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
I+ G ++ + + GVE + + L+++S DT A+F ++ N
Sbjct: 134 R-----IVLSGGRVFDPVSGAEAMAELAMALGVEEESLILQSESKDTHDEAKFVKPIVGN 188
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTE 224
ILV+SA H+ R+ F+ G++ + + + A P S F E
Sbjct: 189 DHF---ILVTSANHMARAMGMFRKSGMSPIPAPAGHTILKSQTTAPGDFFPSSHGFDKAE 245
Query: 225 LALKEYIGILIAYYRG 240
EY+GIL A RG
Sbjct: 246 QVFYEYLGILWALLRG 261
>gi|218709086|ref|YP_002416707.1| hypothetical protein VS_1092 [Vibrio splendidus LGP32]
gi|218322105|emb|CAV18210.1| Hypothetical protein VS_1092 [Vibrio splendidus LGP32]
Length = 301
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 100/245 (40%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+++ L + + + + I + + + LL ++ + L
Sbjct: 52 LILAFLGLALVMFTA--KRKTGCLITLSALCGIFLIAFQPVSSQLLMPMERQHTAFLPID 109
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G + IP E S R+ E +R+ + + +
Sbjct: 110 DT---VDYIMVLGSGHVVDDQIP-PTSELSRTGLMRLSEGIRILRLYPGAKLILS----- 160
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ + + L GV + DI L + DT++ A+ +++ +KN + ++LV+
Sbjct: 161 GYGAGTEVSNAKMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKNKK---MVLVT 217
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+ + ++YL + +P + TE E +G++
Sbjct: 218 SASHMTRALNEFNAAGMKPLPAPTNYLAQEGIVEPWNKYMPKAIYLEQTERYWHETMGLV 277
Query: 235 IAYYR 239
R
Sbjct: 278 WQSLR 282
>gi|222100068|ref|YP_002534636.1| hypothetical protein CTN_1094 [Thermotoga neapolitana DSM 4359]
gi|221572458|gb|ACM23270.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
Length = 252
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/240 (20%), Positives = 97/240 (40%), Gaps = 21/240 (8%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
LI+ + + R +F + + + L+ L+ L+ P
Sbjct: 30 GIFILILLLSAVFSRKGRWLFVLLAT--FLYVLSSYPAEFLFLRPLEED----LIVPDGL 83
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+IV+LG G S + RI ++++ I+++GG
Sbjct: 84 PQNGVIVILGGGVERNTKTG---DSLSDSTLRRILTGFQVHRK-----TGLPILVTGGSL 135
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+I+ L+ GV ++ +E +S +T++NA F+ ++I I+LV+ +
Sbjct: 136 SGLE-PEAIIMKEYLVSLGVPEKNVLVENRSRNTYENAFFTKNLIG---DVPIVLVTDSI 191
Query: 184 HLKRSQLYFQHFGINTKASCSDYL---NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
H++R+ F+ F + + +P + +FYL A+ E+IG++ RG
Sbjct: 192 HMRRALYTFKKFFSEVVPYPAGCYFGTPEFVDFLPSATSFYLNSRAIYEWIGLVWYNLRG 251
>gi|16330498|ref|NP_441226.1| hypothetical protein sll1606 [Synechocystis sp. PCC 6803]
gi|1652989|dbj|BAA17906.1| sll1606 [Synechocystis sp. PCC 6803]
Length = 262
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+ LL+ L++ Y L + +IV+LG G + ++ R
Sbjct: 52 ANSWVSDALLRTLEYQY----LPMEDFPQAPVIVVLGGGLYQA--TYPRQFPEVAEAGDR 105
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGL---AESIVYNNKLLESGVERDDIKLETQ 153
+ ++Y+ K II +GG G +E+ L V R+ I E +
Sbjct: 106 VIYGAQIYQEGKAPY----IITTGGRIPWLGTVATSEAEDMALLLQRLDVPREAIIKEEK 161
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY--- 210
SL+T QNA F+ +++ IILV+S YH+ R++ F+ GI + +D+L+
Sbjct: 162 SLNTRQNAVFTQKILQQRGINTIILVTSGYHMPRAKRVFEKLGIIVIPAATDFLSQPLGR 221
Query: 211 ---------YSIIPLSANFYLTELALKEYIGILIAYYRG 240
++P + + +T +ALKEY+G++I +G
Sbjct: 222 NNFNLANVILGLMPDAKSLQMTTMALKEYLGLVIYKLQG 260
>gi|153007464|ref|YP_001368679.1| hypothetical protein Oant_0119 [Ochrobactrum anthropi ATCC 49188]
gi|151559352|gb|ABS12850.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 277
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 6/242 (2%)
Query: 1 MLLSWIFLIV---SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ I + V H I + + + I I+P L+ LQ +Y L
Sbjct: 1 MMLNLIVVFVVAGLLLHFFNWRKTGIVLIGLAAIFYGAIASAILPDTLMSRLQSAYSSQL 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ +D ++ G GT + +EP SY I + + + C + C I
Sbjct: 61 QT--QLEDNTAFIVFGMGTQTVDGDGQKVVEPLAFSYGPILAAVAMNRQCVEKGFRCKFI 118
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SG D G++E+ +L ++GV+ + L+ +S +++QN++ +++++ ++ ++
Sbjct: 119 ASGADVAGTGVSEAASIATQLEKAGVDPASVLLDEKSRNSWQNSRNVAAILREIRPAKVV 178
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIA 236
L+ +A +KR LY HFG+ + + YL ++ + F +T+LAL E IG+
Sbjct: 179 LLQAAPMMKRDLLYLAHFGVKPEPVAAGYLTGSHTNMSSPGLYFLMTDLALHEEIGVWRY 238
Query: 237 YY 238
Sbjct: 239 TL 240
>gi|188534261|ref|YP_001908058.1| hypothetical protein ETA_21340 [Erwinia tasmaniensis Et1/99]
gi|188029303|emb|CAO97180.1| Conserved hypothetical protein YcbC [Erwinia tasmaniensis Et1/99]
Length = 262
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 92/232 (39%), Gaps = 18/232 (7%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+S L+ I + LL L+ Y ++ + IV+LG
Sbjct: 31 WFSRWQKSARTLISVAWLVLLLISLQPVADRLLAPLENRYPSWH----NQQPLDYIVVLG 86
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G T P A S R+ E +R++ + +I +GG Q + L+ + V
Sbjct: 87 GGYTWNP-QWAPSSNMLNNSLPRLAEGIRIWHENPR----AKLIFTGGKAQGNPLSSAAV 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
N G+ + + + DT Q A + ++ N LV+SA HL R+ LYFQ
Sbjct: 142 TANTARSLGIPDGAMIILDRPRDTEQEAHEVAKIVTNRPFA---LVTSANHLPRAMLYFQ 198
Query: 194 HFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G+ + ++ LN + ++P S +E AL E IG + + +
Sbjct: 199 QEGLQPWPAPANQLAIASPLNLWERVLPSSFWLGHSERALYESIGRMWQWLK 250
>gi|307298224|ref|ZP_07578028.1| protein of unknown function DUF218 [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916310|gb|EFN46693.1| protein of unknown function DUF218 [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 252
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 22/247 (8%)
Query: 2 LLSWIFLIVSYWHLLCQ--SIRKIFFMSCFMLLF--SFIGWGIIPTILLKHLQFSYQRPL 57
L IFLI++ + KI + +L F + G + L+ L+ +Y P
Sbjct: 17 LFILIFLIIAVILIKKSEERRTKISGVVMIILCFFAYLLSTGFGTHLYLQPLERAYTAPN 76
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
G IV+L +G I P S +R+ + L+ K I+
Sbjct: 77 NVS-----GQAIVVLSSGIIISPEG----QVLDNHSVARLSKAYSLHLQTK----LPIIV 123
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
P + +A S + + LL+ GV + +E + T++NA++S+ + +I+
Sbjct: 124 TGSFMPGRSTVAVSELMRDWLLDRGVASSKVIVEPMAQTTWENARYSADICSQFNWSSIV 183
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIG 232
LV+SA H+KR+ F+ FG+ +DY ++ +P ++ EY G
Sbjct: 184 LVTSAVHMKRAVTSFEKFGLRVTPFPTDYLYDHTKLSFVDFLPNQGALDANLASIHEYFG 243
Query: 233 ILIAYYR 239
L ++
Sbjct: 244 QLWYLFK 250
>gi|311747747|ref|ZP_07721532.1| membrane protein [Algoriphagus sp. PR1]
gi|126575735|gb|EAZ80045.1| membrane protein [Algoriphagus sp. PR1]
Length = 256
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 47/249 (18%), Positives = 103/249 (41%), Gaps = 17/249 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M L+ + +++ + + + ++L F I + + ++
Sbjct: 14 MPLTIVIILIVMGAVYIKRKWGKKSLWAGIILLWFFSNQFISNQAMLAWEPDFKEF---- 69
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K+ I ++L T + T + RI ++LY+ K + T
Sbjct: 70 SEIKNHEIGIVLTGVTNLSKTAYDRT--FFNKGADRITHALQLYRMGKIKKILITG--GQ 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNII 177
G + +E+ + L+ +GV +D+ +E ++ +T QNAQF+ + ++ + +
Sbjct: 126 GLNPVNPQSEAELLQRFLIMTGVPPEDVMIEDKAKNTAQNAQFTKTFLEEKGINIDQEFL 185
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYI 231
L++SA+H+ RS+ F G+ T+ +DY + + P ++ +KE+I
Sbjct: 186 LITSAFHMYRSKGCFDKVGLKTETFPTDYYSYDTKYDFPTFMYPSPSSIENWHKLVKEWI 245
Query: 232 GILIAYYRG 240
GI + G
Sbjct: 246 GITVYKLVG 254
>gi|117619411|ref|YP_856904.1| integral membrane protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560818|gb|ABK37766.1| integral membrane protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 259
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+G + L + L+ ++ +S D IV+LGNG P +P + + + +
Sbjct: 55 MGMRPVSYELARGLEQTFPPFEVS--QHPDIEAIVVLGNGHVSDPAVPERSWQ-NNIALA 111
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R E +RL ++ Q + + +S L+ + V + G+ R + L +
Sbjct: 112 RTLEGVRLAQAYPQAELIFSGYVS-----GDPLSNAEVNARMAVSLGIPRSRMTLFENNK 166
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-------N 208
DT + S+ ++++GK + LVSSA HL R+ +Q G+N + ++Y
Sbjct: 167 DTHDE---AVSISRHLKGKRVALVSSATHLPRAMALYQGQGLNAVPAPTNYTAKQSQVAQ 223
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
YS +P +E A+ E+IG+ A RG
Sbjct: 224 PLYSYLPKGRYLMYSEAAIHEWIGVWWARLRG 255
>gi|238789306|ref|ZP_04633093.1| hypothetical protein yfred0001_41150 [Yersinia frederiksenii ATCC
33641]
gi|238722638|gb|EEQ14291.1| hypothetical protein yfred0001_41150 [Yersinia frederiksenii ATCC
33641]
Length = 234
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 20/239 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
++ W Q K F + L+ I + LL L+ Y + Q
Sbjct: 3 LALILLWFTRWQKSGKTLF-ALSWLVLLLISLQPVADRLLLPLEKQYA----TYQGNDPV 57
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RLY++ M T G +
Sbjct: 58 DYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGIRLYRAHPDAKMVFT-----GGAGPN 111
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV ++I Q DT + A +S++ K +LV+SA HL
Sbjct: 112 SQSSARTAAQVAESLGVPAENIIALDQPKDTVEEAAAVASLVG---DKPFLLVTSASHLP 168
Query: 187 RSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ +F G++ A+ ++ L+++ IP + +E A E +G++
Sbjct: 169 RAMKFFVAKGLHPIAAPANQLAITTPLHSWERTIPAAVYLGHSERAWYETLGLIWQKLT 227
>gi|239617397|ref|YP_002940719.1| protein of unknown function DUF218 [Kosmotoga olearia TBF 19.5.1]
gi|239506228|gb|ACR79715.1| protein of unknown function DUF218 [Kosmotoga olearia TBF 19.5.1]
Length = 254
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 16/222 (7%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + F + LFS++ I T L +K L+ Y P S IV+LG G I
Sbjct: 39 KMLSFSILIIGLFSYLLMSGIGTYLYVKPLETEYSVPNASLLDT--AEAIVVLGGGMIIA 96
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P +EP + R+++ +++++ + I+ G + L+ES V N LL
Sbjct: 97 P----YELEPGDHTLKRLYKAFQIHRA----TGKPIIVTGGTPMGRDSLSESEVMLNTLL 148
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G++ +D+ +E + +T +NA + + K + K I+LV+SA H+KRS F+ G+N
Sbjct: 149 NWGIDENDVIVENSARNTNENAVRVAEICKEKKWKKIVLVTSAVHMKRSVESFEEQGLNV 208
Query: 200 KASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIA 236
+DYL ++ +P + E+IGI+
Sbjct: 209 IPYPTDYLYDYTDLSWVDFLPGRDALTANLSGIHEFIGIIWY 250
>gi|212634481|ref|YP_002311006.1| hypothetical protein swp_1641 [Shewanella piezotolerans WP3]
gi|212555965|gb|ACJ28419.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 280
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 13/240 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ LS I + V+Y + + K + ++ LL L+ Y ++
Sbjct: 50 VPLSIILIAVAYLVIRNLKLAKSILLIAAGMILVLSSSM-GSNALLAPLENQYS---VNN 105
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ G ++++LG+G + PA++ + S +R+ E +R C +++SG
Sbjct: 106 EPMGSGCLVMVLGSGHDEVENQPAVQ-QLSNTGLARLSEGIR----QLSLGQDCQLVVSG 160
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ A + V + +E GV + I + DT + AQF + LV+
Sbjct: 161 WSGGLNTRAHADVMFDAAVELGVNPNAIIKFPLAKDTIEEAQFMQW---EVADAPFRLVT 217
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY-LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H+ RS F++ G+N A+ +D+ Y + + ++ A+ EY+G+L ++
Sbjct: 218 SASHMPRSMAIFENSGLNATAAPTDFAQRKTYWWYFDAQSLLSSQRAIHEYLGLLWFKFK 277
>gi|323142298|ref|ZP_08077130.1| hypothetical protein HMPREF9443_01929 [Phascolarctobacterium sp.
YIT 12067]
gi|322413182|gb|EFY04069.1| hypothetical protein HMPREF9443_01929 [Phascolarctobacterium sp.
YIT 12067]
Length = 258
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 20/248 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL I + + + LL F + +L + L+ Y +
Sbjct: 19 VLLGIILSVYLWRRRQNIGRFAFSLSAFLTLLLYFSSTLLGAKLLGQPLENRYIQ----- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q +IV+LG G+ R +R+ RL K ++ISG
Sbjct: 74 QQPDAAQVIVVLGGGSVGSAPDGTERGGLMSAGAARLLTAARLAKQH-----SLPVLISG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + G++E++V LL+ G+ ++ I +ETQ+ T +NA +++ + ++++L++
Sbjct: 129 GQVFRDGVSEALVAERILLQLGLPQEQIIVETQARTTKENAAYTAMHCRERGYQSVLLLT 188
Query: 181 SAYHLKRSQLYFQH----FGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEY 230
SA H+ RS +F+ G+ A DY ++P F +T +AL EY
Sbjct: 189 SALHMPRSMQFFERYLGEQGVKVAAYPCDYTLNPQGKFNPRWLVPQLQAFDVTCMALHEY 248
Query: 231 IGILIAYY 238
+G+ A+
Sbjct: 249 VGMAGAFL 256
>gi|153000003|ref|YP_001365684.1| hypothetical protein Shew185_1471 [Shewanella baltica OS185]
gi|151364621|gb|ABS07621.1| protein of unknown function DUF218 [Shewanella baltica OS185]
Length = 248
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 110/241 (45%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI-FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ L+ + + +SC + F+ + L++ L+ +Y ++
Sbjct: 16 MPIPFILLLLVISFLVWRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYP---IN 72
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+++LG+ + I A++ S + +R+ E +R +++ +I+S
Sbjct: 73 STPITGACFVMVLGSAHSDIQGATAVQ-SLSAVALARLSEGVRQLNLGQEY----KLIVS 127
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + ++ + + N +E GV++ I + DT + AQ+ + + LV
Sbjct: 128 GWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIEEAQYLQWELGE---EPFRLV 184
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+SA H+ R+ F G++ +A+ +D++ + + N ++ A+ EYIG L +
Sbjct: 185 TSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRLWLWL 244
Query: 239 R 239
+
Sbjct: 245 K 245
>gi|206969698|ref|ZP_03230652.1| conserved domain protein [Bacillus cereus AH1134]
gi|206735386|gb|EDZ52554.1| conserved domain protein [Bacillus cereus AH1134]
Length = 277
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L S +FL +S ++ IF + ++ FI + L + + + RP
Sbjct: 40 ILFSILFLFISPASFFSSHLQPIFGGISLITIYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 143 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 203 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 249
>gi|123966515|ref|YP_001011596.1| hypothetical protein P9515_12821 [Prochlorococcus marinus str. MIT
9515]
gi|123200881|gb|ABM72489.1| Hypothetical protein P9515_12821 [Prochlorococcus marinus str. MIT
9515]
Length = 236
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 106/242 (43%), Gaps = 22/242 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
LI+ ++ + +R I+ +++ G+ L + L++ ++R S
Sbjct: 1 MLILLVIFIIRKKLRFIY---SALIILLVFSNGVFSECLWRLLEYPWKRLEFSSINS--A 55
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+L G + I + R + LYK+ K + + T +S +
Sbjct: 56 DGIVVLSGGRHLPLGNTKI---IEWHDPDRFLAGIELYKANKSNKLIFTGGVS--LLTSN 110
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM---IKNMQGKNIILVSSAY 183
E +Y + + G+ + D+ +T + A+ ++ K + K IILV+SA+
Sbjct: 111 LPPEGTIYIKEAISMGIPKKDVLTTYPVYNTLEEAEAVKALLYREKPLSKKKIILVTSAF 170
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAY---------YSIIPLSANFYLTELALKEYIGIL 234
H+KR++ F+ G+N D+ ++ + IP S+N Y + +A++E IG +
Sbjct: 171 HMKRAKKVFEREGMNVLPYPVDFKSSRNFISSLTNIFKWIPSSSNLYKSSMAVREIIGRM 230
Query: 235 IA 236
I
Sbjct: 231 IY 232
>gi|261252465|ref|ZP_05945038.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio orientalis CIP 102891]
gi|260935856|gb|EEX91845.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio orientalis CIP 102891]
Length = 267
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 97/245 (39%), Gaps = 19/245 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML+ + ++ Q + F+ +F I + + + LL L+ Y
Sbjct: 18 MLIIGMLGLMLIMFTRKQKTGCFVVLFSFIGIF-LIAFQPVSSRLLMPLERQYSAFFPV- 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG+G + IP E S R+ E +R+ + + +
Sbjct: 76 --DESIDYVMVLGSGHVVDDKIP-PTSELSRTGLMRLAEGIRVMRIYPGSKLILS----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ + + L GV + DI L + DT++ A+ +++ + + +V+
Sbjct: 128 GYAGGSEVSNARMMAKVALSLGVSKSDIILLETAKDTWEEARQAAAFVTTKKLV---VVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+KR+ F G++ + ++YL A+ P TE E +G +
Sbjct: 185 SASHMKRALNEFHSAGMDPYPAPTNYLAQNNITQAWEKYTPKGKYLEQTERYWHETLGRI 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQSLR 249
>gi|229181123|ref|ZP_04308455.1| hypothetical protein bcere0005_44660 [Bacillus cereus 172560W]
gi|228602314|gb|EEK59803.1| hypothetical protein bcere0005_44660 [Bacillus cereus 172560W]
Length = 280
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L S +FL +S ++ IF + ++ FI + L + + + RP
Sbjct: 43 ILFSILFLFISPASFFSSHLQPIFGGISLITIYFFIH---LSNFLSAYFLYQFNRP---- 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 96 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 145
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 146 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 205
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 206 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 252
>gi|194431483|ref|ZP_03063775.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|194420308|gb|EDX36385.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|320182013|gb|EFW56918.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella boydii ATCC 9905]
gi|332091384|gb|EGI96471.1| hypothetical protein SD15574_2367 [Shigella dysenteriae 155-74]
gi|332092552|gb|EGI97625.1| hypothetical protein SB521682_1309 [Shigella boydii 5216-82]
Length = 259
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 91/238 (38%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWPALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV + I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPHEQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|229032461|ref|ZP_04188429.1| hypothetical protein bcere0028_45010 [Bacillus cereus AH1271]
gi|228728830|gb|EEL79838.1| hypothetical protein bcere0028_45010 [Bacillus cereus AH1271]
Length = 344
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 107 ILFFMLLPIINPASLFSPHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTAPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 210 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKHRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|83643535|ref|YP_431970.1| hypothetical protein HCH_00644 [Hahella chejuensis KCTC 2396]
gi|83631578|gb|ABC27545.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396]
Length = 251
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 89/246 (36%), Gaps = 22/246 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF--MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ L+ + ++ L+ RK+ + L I L+ L+ Y
Sbjct: 15 LPLALLISFIALMMLIRGRRRKLALGMLGVVWLGLFVISTPWFSDKLMAPLESQYP---- 70
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P ++ +V+LG ++P I + RI E MR+ + ++
Sbjct: 71 -PYAGQEVRYVVVLGGYHESDSSLP-ITSYIEGDAIYRIIEGMRVALLNPESR-----LL 123
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + L+ + Y G R+ I L+ DT + A + + + L
Sbjct: 124 VSGYARTDPLSNAEAYARLAESLGFPRERIDLQEDPRDTHEEALAAQARMGEQPFA---L 180
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIG 232
V+SAYH+ R+ F+ G++ + + + + P T+ A EY+G
Sbjct: 181 VTSAYHMPRAMQLFEGVGLHPIPAPTGHTIKQHQELDWRRFRPALGGLAATQKAWHEYLG 240
Query: 233 ILIAYY 238
L A
Sbjct: 241 ALWANL 246
>gi|157146390|ref|YP_001453709.1| hypothetical protein CKO_02149 [Citrobacter koseri ATCC BAA-895]
gi|157083595|gb|ABV13273.1| hypothetical protein CKO_02149 [Citrobacter koseri ATCC BAA-895]
Length = 259
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K F +S L + + LLK ++ SY Q + +
Sbjct: 27 LALVWFSRFQKTGKAF-ISLGWLAIFLLSLQPVADRLLKPIEDSYPTW----QGTQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+ + +I +G + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGVRLWLANP----GSKLIFTGAAAKTNRV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + GV R DI Q DT + A+ I +LV+SA HL R+
Sbjct: 137 STAEAGARVAQSLGVPRSDIITLDQPKDTEEEAEAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G++ + ++ LN + IP ++ A E +G + + +G
Sbjct: 194 MIFFQHVGLHPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRIWQWLKG 251
>gi|33596348|ref|NP_883991.1| hypothetical protein BPP1716 [Bordetella parapertussis 12822]
gi|33602366|ref|NP_889926.1| hypothetical protein BB3392 [Bordetella bronchiseptica RB50]
gi|33566117|emb|CAE37017.1| conserved hypothetical membrane protein [Bordetella parapertussis]
gi|33576805|emb|CAE33884.1| conserved hypothetical membrane protein [Bordetella bronchiseptica
RB50]
Length = 254
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 86/231 (37%), Gaps = 14/231 (6%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
++ +L L L+ Y P L P + IV+LG
Sbjct: 30 FRLRKTGAALIAGGLLWALAWSLPATSLWLGGALESRY--PHLPPDQSPTADAIVVLGGN 87
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T + + R+ L+++ + + + GD ++E+
Sbjct: 88 TANGRANWFLPYDKETAVV-RVDTATELFQAGRAPKVVLSGGALEGD-----ISEARGMA 141
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ + GV + LE S T++NA + ++ + ++LV+SA H+ R+ F
Sbjct: 142 YRMRQHGVPESALILENASRTTYENAALTEDTLRQHGIQKVLLVTSALHMPRAMAAFSKQ 201
Query: 196 GINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ A+ + + +P +F + +KEY G+ + + RG
Sbjct: 202 GVQAIAAPAPPQIVAPADGSLSPWLPDQRSFDASRSIIKEYAGLFVYWLRG 252
>gi|260779195|ref|ZP_05888087.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605359|gb|EEX31654.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio coralliilyticus ATCC
BAA-450]
Length = 267
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 97/245 (39%), Gaps = 19/245 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML+ ++ Q + F+ +F I + + + LL L+ Y
Sbjct: 18 MLIIGFLGLMLIMFTRKQKTGCFVVLFSFIGIF-LIAFQPVSSRLLMPLERQYSAFFPV- 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG+G + IP E S R+ E +R+ + + +
Sbjct: 76 --DETIDYVMVLGSGHVVDDKIP-PTSELSRTGLMRLAEGIRIMRIYPGSKLILS----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ + + L GV + DI L + DT++ A+ +++ +K + +V+
Sbjct: 128 GYAGGSEVSNARMMAKVALALGVSKSDIILLETAKDTWEEARQAAAFVKRKKLV---VVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+KR+ F G+ + ++YL A+ P + TE E +G +
Sbjct: 185 SASHMKRALNEFHSAGLKPYPAPTNYLAHDKVTQAWAKYAPKAVYLEQTERYWHETLGRI 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQSLR 249
>gi|33593317|ref|NP_880961.1| hypothetical protein BP2323 [Bordetella pertussis Tohama I]
gi|33572673|emb|CAE42596.1| conserved hypothetical membrane protein [Bordetella pertussis
Tohama I]
gi|332382726|gb|AEE67573.1| hypothetical protein BPTD_2282 [Bordetella pertussis CS]
Length = 254
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 86/231 (37%), Gaps = 14/231 (6%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
++ +L L L+ Y P L P + IV+LG
Sbjct: 30 FRLRKTGAALIAGGLLWALAWSLPATSLWLGGALESRY--PHLPPDQSPTADAIVVLGGN 87
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T + + R+ L+++ + + + GD ++E+
Sbjct: 88 TANGRANWFLPYDKETAVV-RVDTATELFQAGRASKVVLSGGALEGD-----ISEARGMA 141
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ + GV + LE S T++NA + ++ + ++LV+SA H+ R+ F
Sbjct: 142 YRMRQHGVPESALILENASRTTYENAALTEDTLRQHGIQKVLLVTSALHMPRAMAAFSKQ 201
Query: 196 GINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ A+ + + +P +F + +KEY G+ + + RG
Sbjct: 202 GVQAIAAPAPPQIVAPADGSLSPWLPDQRSFDASRSIIKEYAGLFVYWLRG 252
>gi|229198964|ref|ZP_04325651.1| hypothetical protein bcere0001_44800 [Bacillus cereus m1293]
gi|228584510|gb|EEK42641.1| hypothetical protein bcere0001_44800 [Bacillus cereus m1293]
Length = 277
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 101/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +FL +S + IF + ++ FI + L + + + RP
Sbjct: 40 ILFCILFLFISPASFFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++
Sbjct: 143 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYKSI 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 203 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 249
>gi|304409588|ref|ZP_07391208.1| protein of unknown function DUF218 [Shewanella baltica OS183]
gi|307303946|ref|ZP_07583699.1| protein of unknown function DUF218 [Shewanella baltica BA175]
gi|304352106|gb|EFM16504.1| protein of unknown function DUF218 [Shewanella baltica OS183]
gi|306912844|gb|EFN43267.1| protein of unknown function DUF218 [Shewanella baltica BA175]
Length = 233
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 110/241 (45%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI-FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ L+ + + +SC + F+ + L++ L+ +Y ++
Sbjct: 1 MPIPFILLLLVISFLVWRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYP---IN 57
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+++LG+ + + A++ S + +R+ E +R ++ C +I+S
Sbjct: 58 STPITGACFVMVLGSAHSDLQGATAVQ-SLSAVALARLSEGVRQLNLGQE----CKLIVS 112
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + ++ + + N +E GV++ I + DT + AQ+ + + LV
Sbjct: 113 GWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIEEAQYLQWELGE---EPFRLV 169
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+SA H+ R+ F G++ +A+ +D++ + + N ++ A+ EYIG L +
Sbjct: 170 TSATHMPRAMAIFTAKGLHPEAAATDFIGRDDFWWRLTADNLVASQRAIHEYIGRLWLWL 229
Query: 239 R 239
+
Sbjct: 230 K 230
>gi|330721274|gb|EGG99364.1| Putative membrane protein [gamma proteobacterium IMCC2047]
Length = 256
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 91/241 (37%), Gaps = 13/241 (5%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ ++ + L + K +S +L + ++ L K L+ Y +
Sbjct: 21 ILGVVFALLFLRRHPVLKTLLISFSLLTLLLLSVPMVSYTLGKQLE-RYPALDWQSIKDE 79
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D IV+LG+G + R+ L++ ++++GG
Sbjct: 80 DYQAIVVLGSGRYRAAPEYGGQDTAKPMGLVRLRYGAYLHRK-----TGLPLLVTGGAWL 134
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E+ L E + E +S T++NA++S + + + I+LV+ A+H
Sbjct: 135 DDFVPEAEFMARVLEEEFL-VKATWQEPRSRTTWENAKYSRELTGSDGVQKILLVTHAWH 193
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGILIAYY 238
+ R+ F+ G + A+ + + + IP ++ + L E +G+L
Sbjct: 194 MPRALYSFERAGFDVTAAPTQFKTSNPAGGLVGDYIPNVSSLQDSTWMLHEMLGLLWYRM 253
Query: 239 R 239
Sbjct: 254 T 254
>gi|302877595|ref|YP_003846159.1| hypothetical protein Galf_0351 [Gallionella capsiferriformans ES-2]
gi|302580384|gb|ADL54395.1| protein of unknown function DUF218 [Gallionella capsiferriformans
ES-2]
Length = 254
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 13/230 (5%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ Q + ++L L L+ + IV
Sbjct: 26 GIYLFYRQPKFARALCTSALVLLWIASTPYFAEGALHLLENQTHALT---ADSPKASAIV 82
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG GT + S + R+ RL Q ++ I+++GG P +G +E
Sbjct: 83 ILGGGTYFHAPEYDNQDTVSEATLLRLRYGARL-----QRELNAPILVTGGKPLGNGTSE 137
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L E E S +TF+NA++S ++ ++I LV+ A+H+ RS
Sbjct: 138 AHQMRTVLEEDFRIPAR-WTEDASDNTFENARYSYQTLQKAGIRDIYLVTHAWHMLRSAA 196
Query: 191 YFQHFGINTKASC----SDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
F+ G + + Y + IP + +++ + E IG+L
Sbjct: 197 AFRAAGFVVIEAPTCFTTRYQTNLLAFIPRAEALRDSKIFVHEVIGLLWY 246
>gi|149197614|ref|ZP_01874664.1| hypothetical protein LNTAR_20313 [Lentisphaera araneosa HTCC2155]
gi|149139184|gb|EDM27587.1| hypothetical protein LNTAR_20313 [Lentisphaera araneosa HTCC2155]
Length = 247
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 92/245 (37%), Gaps = 20/245 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSI----RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
L + + L + R L + + + ++ + L++ Y
Sbjct: 14 PLVLFCIALGVSFYLWKKKDDKKRAYKVAMIASLSILLLSFPPVSHLIARPLEYQYPP-- 71
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
D I +LG+G + P ++ S + SR+ E +R + +
Sbjct: 72 --SSNHLDAKYIAVLGSGHSSQKHWPD-SLKLSRTARSRLMEGLRQKQLNPEAKFIFFGF 128
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
G + + GV +DI Q DT + AQF+ + +
Sbjct: 129 GVNGKQPHGEI-----MTQAAISLGVNPEDISFSVQPRDTNEEAQFAKEVCGTEKLL--- 180
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLN---AYYSIIPLSANFYLTELALKEYIGIL 234
LV+ A H R+ F+ +G+N A+ ++Y + A++ +P + LT ++ EY+G++
Sbjct: 181 LVTDATHTPRAMKLFKSYGLNVFATPANYESYGDAWFVPMPSAEALELTRKSIYEYVGLI 240
Query: 235 IAYYR 239
+
Sbjct: 241 WVNLK 245
>gi|228936112|ref|ZP_04098918.1| hypothetical protein bthur0009_45540 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823567|gb|EEM69393.1| hypothetical protein bthur0009_45540 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 302
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L S +FL +S ++ IF + L+ FI + L + + + RP
Sbjct: 65 ILFSILFLFISPASFFSPHLQPIFGGISLITLYFFIH---LSNFLSAYFLYQFNRP---- 117
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 118 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 167
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 168 GQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 227
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 228 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 274
>gi|182413009|ref|YP_001818075.1| hypothetical protein Oter_1189 [Opitutus terrae PB90-1]
gi|177840223|gb|ACB74475.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 258
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 113/229 (49%), Gaps = 4/229 (1%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + + + + +F +G G + +L + LQ PQ ++I
Sbjct: 26 IVAVAAIRRWDMVLPLAVVCVAVFILVGNGFLTRLLARSLQER--AFFQKPQDFGGVSVI 83
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
VLLG+G + + P + +YSRI LY+S C +I++G D G A
Sbjct: 84 VLLGDGHIV--ERGSGEALPGWLAYSRIERACELYRSATATGAACRLIVTGDDISDLGTA 141
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ VY +L GV DI++E + +T++ A+ +S ++K+ + I +V+S H+KR+
Sbjct: 142 KEPVYVQRLRALGVPVGDIRVEGKGRNTYRQAELTSEILKSERYDRIFMVTSGLHMKRAL 201
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
YF++FG+ SDY+ +++PL +N + ++AL +Y G+ +
Sbjct: 202 RYFRNFGVRAIPVASDYVIGNITLLPLGSNLAIADIALHQYAGLARLWI 250
>gi|260881233|ref|ZP_05403953.2| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
gi|260849348|gb|EEX69355.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
Length = 266
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 18/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQS--IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + L V W L + R + F + G++ + L+ +YQ P
Sbjct: 31 IFILALFVLAWWLWKKRGEKRAAAVLFALTFAFYLLCTGLVAEKTMGWLESAYQPPE--- 87
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ G++I++LG G SR+ +RL Q + I++SG
Sbjct: 88 --RPAGDVIIMLGGGAYSDTPDVDGTGTLCASPASRLLTAVRL-----QRQLDVPILLSG 140
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + AE+ + L+ GV D I ET+S++T QNA+FS+ +++ + ILV+
Sbjct: 141 GQVYEDTGAEAKIAKRVLMSLGVPEDKILTETRSINTSQNARFSAEILRENGLSHPILVT 200
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGIL 234
SA+H+KRS L F G+ + +DY+ A Y + P + L+E +
Sbjct: 201 SAFHMKRSVLNFAKQGVAVEPFPTDYMVAHHPVFHYTKLRPQTEALLDNVTVLQETLRTF 260
Query: 235 IAYY 238
+ Y
Sbjct: 261 VTRY 264
>gi|239787465|emb|CAX83936.1| conserved uncharacterized protein [uncultured bacterium]
Length = 258
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/244 (17%), Positives = 87/244 (35%), Gaps = 14/244 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + LIV +W L R + + +++F I ++ + + ++ +
Sbjct: 18 IILLALIVVWWWLPRSPHRARWLLGLIIVIFYGITLPVVGNLSMATVES-IPPLTPAQIA 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
IV+LG+G + +RI L+ I+ SGG
Sbjct: 77 ATQAQAIVILGHGRYPAAPEYDGADTVNTGGLARIRYGAWLH-----RRTGLPILTSGGK 131
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P + +E+ + L + E S +T +NA+ + ++ +++LV+
Sbjct: 132 PFQEKESEAQLMKRALEKEFGVPVR-WTEDSSDNTLENARNTQKILAAQGIDHVLLVTHG 190
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIAY 237
H+ R+ F G+ + + + +PLS L EY+G L
Sbjct: 191 NHMVRALQTFHQAGLKITPAPTLFQTPTPNAGILDWLPLSCRGVWVP--LHEYVGRLWYQ 248
Query: 238 YRGN 241
R
Sbjct: 249 LRCG 252
>gi|312114877|ref|YP_004012473.1| hypothetical protein Rvan_2149 [Rhodomicrobium vannielii ATCC
17100]
gi|311220006|gb|ADP71374.1| protein of unknown function DUF218 [Rhodomicrobium vannielii ATCC
17100]
Length = 276
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 86/228 (37%), Gaps = 8/228 (3%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
Q + L + + + LL L+ + + + I++LG G +
Sbjct: 32 QRRAVALRLIVAATLLYVVAFSPLANWLLHPLEH--EVKAGTERDVAGAAGIIVLGGGVS 89
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
I S R+ ET+RL + + E+
Sbjct: 90 GAIPTEGGAIPLGP-SVERVTETLRLALRHPDLPVIFSGGSGLILQLSDAPNEADAARRF 148
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
G+ ++LE +S +T +NA S++M++ + ILV+SA+H++R+ F+ G
Sbjct: 149 FEGFGIVAPRLRLEDRSRNTLENATLSAAMLQPKPDQRWILVTSAFHMRRAAALFEAQGF 208
Query: 198 NTKASCSDYLNAYYS-----IIPLSANFYLTELALKEYIGILIAYYRG 240
YL + S + ++A KE++GI +++ G
Sbjct: 209 RVVPWPVGYLTSGTGDLRQPFGRASEGLHRIDIATKEWLGIFVSWANG 256
>gi|239830956|ref|ZP_04679285.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823223|gb|EEQ94791.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 272
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 107/236 (45%), Gaps = 3/236 (1%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + + ++ + I G+ P L+ LQ Y L P
Sbjct: 5 IMLSFAAVGLILFCFKWRKTGTVLIGLAVIFYGAIASGLAPDYLMNRLQSPYTSQLQRP- 63
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+D ++ G GT ++ +EP SY+ + + + C C I SG
Sbjct: 64 -LEDNTAFIIFGTGTQVVDERGQKAVEPLAFSYAPLLAAAAMNRQCVDKGFSCKFIASGA 122
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D G++E+ +L + G++ I L+ +S +++QN++ ++++++ ++ ++L+ +
Sbjct: 123 DVSGTGVSEATAIAVQLEKVGIDPASILLDEKSRNSWQNSKNTAAILREIRPARVVLLQA 182
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIA 236
A L R LY HFG+ + + +L ++ + +A F +T++AL E IG+
Sbjct: 183 APMLTRDLLYLAHFGVKPEPVAAGFLTGSHTNMSSTALYFLVTDVALHEEIGLWRY 238
>gi|229163803|ref|ZP_04291746.1| hypothetical protein bcere0009_45690 [Bacillus cereus R309803]
gi|228619623|gb|EEK76506.1| hypothetical protein bcere0009_45690 [Bacillus cereus R309803]
Length = 344
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 107 ILFFMLLPIINPASLFSPHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ K I
Sbjct: 210 GQGPDEGLPEAEAMQKYAIEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPKGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIIV 316
>gi|317407644|gb|EFV87583.1| hypothetical protein HMPREF0005_04608 [Achromobacter xylosoxidans
C54]
Length = 254
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 84/231 (36%), Gaps = 14/231 (6%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ +L + L L+ Y P L P + IV+LG
Sbjct: 30 FRLRKTGGALILAGLLWALAWSLPVTSLWLGGALENRY--PHLPPAESPTADAIVVLGGN 87
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T + + R+ +LY + + + + GD ++E+
Sbjct: 88 TANGRANWFLPYDKDTAVV-RVDTAAQLYLAGRAPKVVLSGGALEGD-----VSEARGMA 141
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ + + GV + LE S T++NA + +K ++LV+SA H+ R+ F
Sbjct: 142 HAIRQQGVPESALILENASRTTYENAALTEDQLKTRGIGKVLLVTSALHMPRAMAAFSKQ 201
Query: 196 GINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ A+ + + +P F + +KEY G+ + + RG
Sbjct: 202 GVIAIAAPAPPQIVAPADGSLNPWLPDQRTFDASRSIIKEYAGLFVYWLRG 252
>gi|192291940|ref|YP_001992545.1| hypothetical protein Rpal_3570 [Rhodopseudomonas palustris TIE-1]
gi|192285689|gb|ACF02070.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 264
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 100/243 (41%), Gaps = 11/243 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ I + L + ++L G+ + +LL L + +
Sbjct: 19 IAMICVAGLVLMLTRWWRAGRALLIGGVVLLLIAGYSPLGNVLLLSLSERFPPWH---EA 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + I++LG ++ +E S R+ + L + + + + G+
Sbjct: 76 GRAPDGIIVLGGAIDSELSVARNTLEVDA-SAERVLAALDLARRYPKARIVYSG--GSGN 132
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +AE+ + L G+ D + LE +S T +NA ++ +++ G+ +LV+SA
Sbjct: 133 LIQRSVAEAPLAGELLERFGLASDRLVLEDKSRTTAENAAYTRALVVPKPGELWLLVTSA 192
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAY 237
+H+ RS + F+ G + D+ A + L+A T++A+ E+ G+L
Sbjct: 193 FHMPRSIIAFRAAGFDVVPYPVDWRTRGSEDAARTFSTLAAGLARTDVAVHEWAGLLAYR 252
Query: 238 YRG 240
G
Sbjct: 253 LGG 255
>gi|187478721|ref|YP_786745.1| membrane protein [Bordetella avium 197N]
gi|115423307|emb|CAJ49841.1| putative membrane protein [Bordetella avium 197N]
Length = 254
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 14/230 (6%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++ ++ L L+ Y P L P + IV+LG T
Sbjct: 31 RWRKTAGALIATGLIWVLVWSLPATSLWLGGALEHRY--PYLEPDSAPTADAIVVLGGNT 88
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + R+ LY + + + + G+ ++E+ +
Sbjct: 89 ANGRANWFLPYDKDTAVV-RVDTATDLYLADRAPKVVLSGGALEGN-----VSEAQGMAH 142
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ + GV + LE S +T++NA + ++ ++LV+SA H+ R+ F G
Sbjct: 143 RMRQRGVPDSALVLENASRNTYENAALTEDTLRANHISKVLLVTSALHMPRAMAAFSKQG 202
Query: 197 INTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGILIAYYRG 240
+ A+ + + +P + +KEY G+L+ + RG
Sbjct: 203 VEAIAAPTPPQIVPPTDGSLSPWMPDMRTLDASRSIIKEYAGLLVYWLRG 252
>gi|149911645|ref|ZP_01900255.1| hypothetical protein PE36_07911 [Moritella sp. PE36]
gi|149805269|gb|EDM65284.1| hypothetical protein PE36_07911 [Moritella sp. PE36]
Length = 251
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/253 (17%), Positives = 98/253 (38%), Gaps = 25/253 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR----KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M L ++ + LL + R + + + + T L L+ Y
Sbjct: 13 MPLPFLLTVFILAALLYKFTRFERTAQILLFSSFITLLLLSLAPVATRLAATLESQYP-- 70
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+++ + I +LG+G T + +P I + + + +R E +R+YK
Sbjct: 71 ---SYQQQNVDYIHVLGSGHTTVDGLP-ITSQLTPAALTRTTEGVRIYKLNPTAK----- 121
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+I G + + + + GV + I L Q DT + A + + + Q
Sbjct: 122 LIFSGYSGGDINSNAKMNARLAMALGVPKSAILLLEQPKDTIEEAIDNKKITQGKQLV-- 179
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-------YSIIPLSANFYLTELALKE 229
LV+SA H+ R+ FQ G+ + + +++ + P + ++ + + E
Sbjct: 180 -LVTSATHMPRAMKIFQQQGLFPIPAPTAHVSKPVNGTPPLHYYFPRARYLAISSMVVHE 238
Query: 230 YIGILIAYYRGNR 242
++G+ + N+
Sbjct: 239 WLGLAWLSLKNNQ 251
>gi|156934588|ref|YP_001438504.1| hypothetical protein ESA_02422 [Cronobacter sakazakii ATCC BAA-894]
gi|156532842|gb|ABU77668.1| hypothetical protein ESA_02422 [Cronobacter sakazakii ATCC BAA-894]
Length = 259
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 89/242 (36%), Gaps = 19/242 (7%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ + ++ M+ ++ + + LLK ++ Y +
Sbjct: 22 MMGIALALLWFTRFKQSGKVLMTASWVILLLLSLQPVADGLLKPVEDDYPTW-----NGQ 76
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+LG G T A S R+ E +RL+ + ++ +G
Sbjct: 77 KADYIVVLGGGYTWND-KWAPSSNLVNNSLPRVTEGVRLWLANP----GAKMVFTGARAT 131
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ + GV R DI DT + A + + LV+SA H
Sbjct: 132 TNPVSTAEAGARVAESLGVPRTDIITLDSPKDTEEEAAAVAGALGKQPFL---LVTSASH 188
Query: 185 LKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
L R+ ++F+ G+N + ++ LN + + P S +E A E +G + +
Sbjct: 189 LPRAMIFFKRQGLNPIPAPANQMAIDSPLNPWERVYPSSLWLMHSERAGYEILGRVWQWV 248
Query: 239 RG 240
+G
Sbjct: 249 KG 250
>gi|260887636|ref|ZP_05898899.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|330837998|ref|YP_004412578.1| protein of unknown function DUF218 [Selenomonas sputigena ATCC
35185]
gi|260862652|gb|EEX77152.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|329745762|gb|AEB99118.1| protein of unknown function DUF218 [Selenomonas sputigena ATCC
35185]
Length = 252
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 100/227 (44%), Gaps = 16/227 (7%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ +F + ++ +L+ L+ +Y P K +G+++++LG G
Sbjct: 35 RFAAKAIVLITAVFYLLSTYLVADVLMGALEDAYMPPA-----KPEGDVVIMLGGGAFSD 89
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ +R+ +RL + + I++SGG + E+++ L+
Sbjct: 90 APDVDGEGALTASPSTRLLTAVRLAQK-----LDLPILVSGGQVFQESGKEALLAKRTLV 144
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ I +E S +T QNA +++ ++K ILV+SA+H+KRS L ++ GI
Sbjct: 145 SLGIPESRILVEGASQNTVQNAAYTAKILKEHGLVRPILVTSAFHMKRSVLNYEKLGIEV 204
Query: 200 KASCSDYLNAYYSII------PLSANFYLTELALKEYIGILIAYYRG 240
+DY+ +++ I P + + + L+E + + Y G
Sbjct: 205 VPYPTDYMVSHHPIFHVVKLAPSADALHTNAVVLQECLRTAVTYCLG 251
>gi|298291473|ref|YP_003693412.1| hypothetical protein Snov_1483 [Starkeya novella DSM 506]
gi|296927984|gb|ADH88793.1| protein of unknown function DUF218 [Starkeya novella DSM 506]
Length = 274
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 10/229 (4%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ G I +L+ L+ + + +++LG
Sbjct: 32 WFRRLGTVLTVLGGVGLLVAGLSPIGRMLMVPLENRFPA---YVDEGSPVDGVIVLGGAE 88
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
T + ++ R+ L + + S + + E+ V
Sbjct: 89 LAGITAARGQSSF-QEAGERMLAMGELARRYPGARIVFAGGSSN-LVEASPMQEADVVRL 146
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L + GV+ ++ E S +T +NA+ + ++K + +LV+SA+H+ R+ F+ G
Sbjct: 147 ALPQIGVDPARVEFERYSRNTAENARLARELVKPQPDQRWLLVTSAFHMPRAIGCFRAAG 206
Query: 197 INTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
DY + ++ +LA +E++G++ Y G
Sbjct: 207 FPVIPYPVDYRTIGRPELFRLFGTVADGLSFVDLATREWMGLVAYYLAG 255
>gi|37525579|ref|NP_928923.1| hypothetical protein plu1635 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785007|emb|CAE13928.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 279
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 79/208 (37%), Gaps = 17/208 (8%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWK--KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ LL ++ Y S + IV+LG G T P A S R+
Sbjct: 57 PVADKLLLPVESVYANSDQSDTSHINPPVDYIVVLGGGFTYNPN-WAPSSNLLNNSLPRV 115
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E +RLY+ M T G + + + V GV +D T+ +DT
Sbjct: 116 TEGIRLYRLNPGSKMVFT-----GGKGANVKSSAEVAAIVAQSLGVPAEDTIALTKPMDT 170
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYY 211
Q A +I N ILV+SA H++R+ +FQ G+N ++ L+ +
Sbjct: 171 EQEANEVEKLIGNQPF---ILVTSANHMQRAITFFQQHGLNPIPGPANQLAITSPLHPWE 227
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYR 239
+P + ++ E +G L +
Sbjct: 228 KYLPSAYYLSHSDRVWYETLGTLWQRIK 255
>gi|302185148|ref|ZP_07261821.1| hypothetical protein Psyrps6_02354 [Pseudomonas syringae pv.
syringae 642]
Length = 256
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 91/240 (37%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + ++ + L+ P
Sbjct: 16 ILFVLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVVVEFAARKLEQIPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ SGG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARLAKE-----SGLPILTSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA S+++++ K ++LV+
Sbjct: 130 LHFDQPPSEAAIMAQSLQDDFAVTVRWQEGL-SRTTWENATMSAAILQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G + +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFAGWLPESRVFTQSGMLLNEAAGLLVY 248
>gi|330816685|ref|YP_004360390.1| hypothetical protein bgla_1g17890 [Burkholderia gladioli BSR3]
gi|327369078|gb|AEA60434.1| hypothetical protein bgla_1g17890 [Burkholderia gladioli BSR3]
Length = 238
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 7/237 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+L F+++ L + R+ + + L IG G + L+ + + +
Sbjct: 1 MILFDSFVLLFVAAALWRK-RRFAIAATGLALLLAIGTGWLAAPLVALAEAGVEP--VEA 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IVLLG G + P + SRI L+ C+ + C I+++G
Sbjct: 58 PTMRGHTAIVLLGGGIERR----RGELVPPHDALSRIVRAAELHSVCQAIASQCDIVVTG 113
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDP HG++E+ +Y L E GV D+ LET+S T++NA++++ ++ ILV+
Sbjct: 114 GDPHHHGISEAQLYAPLLREHGVAERDLILETRSRTTYENAKYTAPILLAQHYDATILVT 173
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S+Y ++R+ L F F I + ++ L P+ NF AL E GI+ Y
Sbjct: 174 SSYQMRRALLDFARFDIEPQPVYANQLRPILGWRPVWHNFVAASRALHEIAGIMQFY 230
>gi|323493229|ref|ZP_08098358.1| hypothetical protein VIBR0546_19494 [Vibrio brasiliensis LMG 20546]
gi|323312495|gb|EGA65630.1| hypothetical protein VIBR0546_19494 [Vibrio brasiliensis LMG 20546]
Length = 267
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 98/245 (40%), Gaps = 19/245 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML+ +F ++ Q + F+ +F I + + + LL L+ Y
Sbjct: 18 MLIIGLFGLMLIMFTRKQKTGCFVVLFSFIGIF-LIAFQPVSSRLLMPLERQYSAFFPV- 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG+G + IP E S R+ E +R+ + + +
Sbjct: 76 --DEPIDYVMVLGSGHVVDDKIP-PTSELSRTGLMRLSEGIRILRIYPGAKLILS----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ + + L GV + DI L + DT++ A+ +++ + + +V+
Sbjct: 128 GYAAGSEVSNARMMAKVALALGVAKSDIILLETAKDTWEEARQAAAFVSTKKLV---VVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+KR+ F G+ A+ ++YL + P + TE E +G +
Sbjct: 185 SASHMKRALNEFHSAGLKPYAAPTNYLAHDNVTQFWAKYTPKAVYLEQTERYWHETLGRI 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQTLR 249
>gi|254245595|ref|ZP_04938916.1| hypothetical protein BCPG_00305 [Burkholderia cenocepacia PC184]
gi|124870371|gb|EAY62087.1| hypothetical protein BCPG_00305 [Burkholderia cenocepacia PC184]
Length = 179
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 98/177 (55%), Gaps = 7/177 (3%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++L+G GT T +P +RI + LY++C+Q + CT+++SGGDPQ H
Sbjct: 5 TTLILIGAGTHRTDTGA----QPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHH 60
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
G E+ VY +L+ GV D+ LE S T++NA+F++S++++ +LV+S+Y ++
Sbjct: 61 GDTEAAVYGRQLVAQGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMR 120
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
R+ L F+ FGI+ + ++ A +P N E AL E +GI + + G
Sbjct: 121 RALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLG 177
>gi|121999045|ref|YP_001003832.1| hypothetical protein Hhal_2266 [Halorhodospira halophila SL1]
gi|121590450|gb|ABM63030.1| protein of unknown function DUF218 [Halorhodospira halophila SL1]
Length = 268
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 51/256 (19%), Positives = 101/256 (39%), Gaps = 23/256 (8%)
Query: 1 MLLSWIFL--IVSYWHLLCQSIRK-IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR-- 55
M LS + L I+ LL + R + ++ W + LL L+ Y
Sbjct: 13 MPLSLLVLAGILGVILLLTRYWRWGRGVLIGTVVALYLASWEPTASRLLAPLEQRYPALL 72
Query: 56 -PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
P + + IV+LG+G + P +P I + + +R+ E +RL + ++
Sbjct: 73 DPAGVAETQGPVTDIVVLGHGHRLDPQLP-ITAQANADGVTRVLEGVRLQRHFPDSTLWL 131
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
T GD + + E G++ ++ + +T + AQ + + + G
Sbjct: 132 TGGAVRGDTPNSEV-----LYRLMGEVGLDAGAVERLAEPRNTAEEAQAVAERLTDDAGT 186
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYL----------NAYYSIIPLSANFYLTE 224
IILV+ A H+ R+ F+ + + + + + + + P ++T+
Sbjct: 187 -IILVTEASHMPRAMGLFRGQELEPIPAPTRHRVRAHEPDAGTHPGHGVRPSVHALHMTK 245
Query: 225 LALKEYIGILIAYYRG 240
A EY+G+ RG
Sbjct: 246 RAFHEYLGMAWGRMRG 261
>gi|83311553|ref|YP_421817.1| hypothetical protein amb2454 [Magnetospirillum magneticum AMB-1]
gi|82946394|dbj|BAE51258.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 266
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 87/236 (36%), Gaps = 20/236 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W L + +S +L F + L L+ +Q P P + I++L
Sbjct: 34 WLSLGRK-----ILSITLLTLVFTSVFPVEKWALAWLEDRFQTPDPLPD---KVDGIIIL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G + + ++ + +R+ E + L + + + T G+ E+
Sbjct: 86 GGAISPEQSAARGQVSVG-SAVTRMTEMIPLARRYPEARVVFTG--GSGNAFDQEHREAD 142
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ G E + E S +T +NA S +++ G+ +L++SA+H+ R+ F
Sbjct: 143 YAEMFYRDIGFETGRMVFERDSRNTRENATLSKELMQPKPGETWLLITSAWHMPRAVGCF 202
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTEL--------ALKEYIGILIAYYRG 240
+ G DY + S P + + + E +G++I G
Sbjct: 203 RAVGWPVVPIPVDYQTSGISR-PWWSELRFSPQKGISGLGPLIHEGLGLIIYRLMG 257
>gi|206978334|ref|ZP_03239209.1| conserved domain protein [Bacillus cereus H3081.97]
gi|217962290|ref|YP_002340860.1| hypothetical protein BCAH187_A4938 [Bacillus cereus AH187]
gi|222098272|ref|YP_002532329.1| hypothetical protein BCQ_4614 [Bacillus cereus Q1]
gi|206743465|gb|EDZ54897.1| conserved domain protein [Bacillus cereus H3081.97]
gi|217064139|gb|ACJ78389.1| conserved domain protein [Bacillus cereus AH187]
gi|221242330|gb|ACM15040.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 344
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 101/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +FL +S + IF + ++ FI + L + + + RP
Sbjct: 107 ILFCILFLFISPASFFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQATVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYKSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIIV 316
>gi|197284617|ref|YP_002150489.1| hypothetical protein PMI0723 [Proteus mirabilis HI4320]
gi|227356800|ref|ZP_03841185.1| integral membrane protein [Proteus mirabilis ATCC 29906]
gi|194682104|emb|CAR41690.1| putative membrane protein [Proteus mirabilis HI4320]
gi|227163090|gb|EEI48025.1| integral membrane protein [Proteus mirabilis ATCC 29906]
Length = 276
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 17/241 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKK 64
F ++ W Q K ++ ++L + +G + LL + +YQ R L +
Sbjct: 24 FFALILLWFTRWQKTGK-SVLTIVIVLLTLLGMQPVADTLLMPSEKAYQARYELRENSPQ 82
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D N IV+LG G T P A S R+ E +RLY S +I G
Sbjct: 83 DVNYIVVLGGGFTYNPE-WAPSANLLNNSLFRVAEGVRLYYRYPNAS-----LIFTGGAG 136
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ + V GV + +Q DT + A +I LV+SA H
Sbjct: 137 VNKISSAEVAAQVAQSLGVPAEKTIALSQPKDTEEEAYEVDKLIGKQPFL---LVTSANH 193
Query: 185 LKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
L R++ +F G++ + ++ L+ + P + F +E A E+IG +
Sbjct: 194 LARAERFFLARGMHPIVAPANQLAITTPLHPWEKYTPSAYYFQHSERAWYEFIGSIWQTI 253
Query: 239 R 239
+
Sbjct: 254 K 254
>gi|294085382|ref|YP_003552142.1| hypothetical protein SAR116_1815 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664957|gb|ADE40058.1| DUF218 [Candidatus Puniceispirillum marinum IMCC1322]
Length = 264
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 85/232 (36%), Gaps = 10/232 (4%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L F ++L G+ + I L+ L+ + P+L + + I++LG
Sbjct: 30 RLFKNRRWARMFTIVAVILPLLYGFIPLSHIPLQFLENRFDVPIL---EGRPLDGIIILG 86
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
T + R + L++ + + G+ G +E+
Sbjct: 87 GHTGNGEISEGRGQPQLSAAAERFTTALHLHRQFPDLPILFSGF--SGELMPKGWSETQT 144
Query: 134 YNNKLLESGVERD-DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L E G+ +I E+ S +T++NA +S +++ G +LV+SA H+ R+ F
Sbjct: 145 IKRLLDELGMAESPNILFESTSRNTYENALYSETVLSPQPGSFWVLVTSASHMPRAVGSF 204
Query: 193 QHFGI-NTKASCSDYLNAYYSI---IPLSANFYLTELALKEYIGILIAYYRG 240
++ G DY L + + EY G+ + G
Sbjct: 205 RNAGWGGVIPYPVDYQTLPSGFPYIWNLPRGLHTMTIVFHEYAGLFAYWLSG 256
>gi|124007832|ref|ZP_01692534.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123986778|gb|EAY26559.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 256
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 46/247 (18%), Positives = 99/247 (40%), Gaps = 13/247 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M ++W+ L+ ++ L + R+ + + L I L + P
Sbjct: 14 MPVTWLCLVFTWALLTKKPRRRRQLLRTGVFLLWLFTNPFIVNQALLLWE---APPTPLH 70
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ ++ ++L T + RI + + LY+ K + + S
Sbjct: 71 SIRQNYDVGIVLTGVTNTDKKPHDRVY--LDKGGDRITQALMLYRVGKIKKILISGG-SF 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILV 179
Q+ AE+ + LL++ V DI +ET++ +T +NA ++ ++ + +L+
Sbjct: 128 DPKQRLERAEAYLLKQVLLQAKVPSHDIIIETKARNTRENALNTAKILNKQFPRQSYLLI 187
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGI 233
+SA+H++R+ F+ GI D+ +S+ P Y + E IG
Sbjct: 188 TSAFHIRRAVGCFRQAGIRVTPFSVDFYTIDKGFTFPFSLFPAEKALYKWYVLSHEVIGY 247
Query: 234 LIAYYRG 240
++ G
Sbjct: 248 IVYKVLG 254
>gi|229014000|ref|ZP_04171124.1| hypothetical protein bmyco0001_44080 [Bacillus mycoides DSM 2048]
gi|229135650|ref|ZP_04264428.1| hypothetical protein bcere0014_45390 [Bacillus cereus BDRD-ST196]
gi|228647830|gb|EEL03887.1| hypothetical protein bcere0014_45390 [Bacillus cereus BDRD-ST196]
gi|228747256|gb|EEL97135.1| hypothetical protein bmyco0001_44080 [Bacillus mycoides DSM 2048]
Length = 257
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + + IF + ++ FI + L + + + RP
Sbjct: 20 ILFCILIPIINPASLFSEHFQFIFAAISLVTMYFFIH---LSNFLSAYFLYQFNRP---- 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 73 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 122
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 123 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYKSI 182
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 183 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 229
>gi|167623456|ref|YP_001673750.1| hypothetical protein Shal_1525 [Shewanella halifaxensis HAW-EB4]
gi|167353478|gb|ABZ76091.1| protein of unknown function DUF218 [Shewanella halifaxensis
HAW-EB4]
Length = 253
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 103/241 (42%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK-IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + + L+++ +L+ ++ R + L + LL L+ Y ++
Sbjct: 13 MPIPMVLLLIALAYLVMRNRRSSKALLVIAAALLIILSSSWGSNWLLAPLEDQYS---VN 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
Q G ++++LG+G +PA++ + S + +R+ E +R K C +++S
Sbjct: 70 NQPMGKGCLVMVLGSGHDENANLPAVQ-QLSHTALARLTEGVRQLSLGKS----CKLVVS 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + + + + +E GV I DT + AQF + LV
Sbjct: 125 GWSGGLSSRSHADMMFDAAVELGVSAQSIIKFPLPKDTIEEAQFMEW---EVADAPFRLV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY-LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+SA H+ R+ F + +N A+ +D+ A Y + + ++ A+ EY+G+L
Sbjct: 182 TSASHMPRAMAIFSNAKLNAIAAPTDFAQRASYWWRFDAQSLLNSQRAIHEYMGLLWFKL 241
Query: 239 R 239
+
Sbjct: 242 K 242
>gi|65322167|ref|ZP_00395126.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
Length = 257
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 20 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 73 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 122
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 123 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 182
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 183 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 229
>gi|37680486|ref|NP_935095.1| hypothetical protein VV2302 [Vibrio vulnificus YJ016]
gi|320155855|ref|YP_004188234.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|326423949|ref|NP_760999.2| membrane protein [Vibrio vulnificus CMCP6]
gi|37199234|dbj|BAC95066.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319931167|gb|ADV86031.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio vulnificus MO6-24/O]
gi|319999327|gb|AAO10526.2| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio vulnificus CMCP6]
Length = 266
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 91/233 (39%), Gaps = 18/233 (7%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ F + L + + + + LL L+ Y L + + +++L
Sbjct: 29 IMFSTRQKTGCFIILFSFLGIFLVSFQPVASKLLMPLERQYSVFL---PEVQTVDYVMVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
GNG + IP E S S R+ E +R+ K + + G + +
Sbjct: 86 GNGHVVDDQIP-PTSELSRASLMRLTEGIRILKMYPGSKLILS-----GYAGGSETSHAR 139
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ N L GV + DI L + DT++ A+ +++ ++ Q LV+SA H+ R+ F
Sbjct: 140 MMANVALALGVAKSDIILLEDAKDTWEEARQAAAFVRQKQLV---LVTSASHMARAMKEF 196
Query: 193 QHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
GI + ++YL A+ P + TE E +G L R
Sbjct: 197 HDAGITPLPAPTNYLAQKNISQAWDRYAPKAIYLEQTERYWYETLGQLWQGMR 249
>gi|15644422|ref|NP_229474.1| hypothetical protein TM1674 [Thermotoga maritima MSB8]
gi|4982249|gb|AAD36741.1|AE001808_16 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 237
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 102/237 (43%), Gaps = 20/237 (8%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+F+++ + F ++ +++ F + + + L L+ + P P
Sbjct: 16 LFILLLIVGSFFFKKARWFLLALAAIVYLFSSY-VGEFLFLWPLEKNLDVPATLPNDA-- 72
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+IV+LG G S + R+ +++Y+ K I+ G
Sbjct: 73 --VIVVLGGGVERNTKAG---DNLSDATLRRLLTGVQIYQKTKMP------ILVTGGSLT 121
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+E+++ + L+ GV + I +E +S +T++NA F+ + IILV+ + H+
Sbjct: 122 GLRSEAMIMKDYLVSLGVPEEKITVEDRSRNTYENALFTRE---KIGDVPIILVTDSIHM 178
Query: 186 KRSQLYFQHFGINTKASCSDY---LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+R+ F+ F + + + + +P + +FYL A+ E+IG++ +R
Sbjct: 179 RRAVFTFKRFFQSVTPYPAGFYFGDPEFVDFLPNATSFYLNSRAIYEWIGLVWYNFR 235
>gi|91977540|ref|YP_570199.1| hypothetical protein RPD_3072 [Rhodopseudomonas palustris BisB5]
gi|91683996|gb|ABE40298.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 264
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 98/243 (40%), Gaps = 11/243 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ I L L + ++L G+ + ++LL L + + +
Sbjct: 19 IAMICLAGVVLLLTRWRRAGARVLGVGVVLLLVAGYSPLGSVLLLTLSERFPPWQFNGRA 78
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I++LG + +E S R+ + L + Q + + G+
Sbjct: 79 P---DGIIVLGGAVDSEVSAARSSLEID-SSAERVVAALELARQYPQARIIYSG--GSGN 132
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +AE+ + L GV D + LE++S T +NA F+ ++ G+ +LV+SA
Sbjct: 133 LIANSVAEAPIAGELLARFGVAPDRVVLESKSRTTAENASFTRELVSPKPGEVWLLVTSA 192
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKEYIGILIAY 237
+H+ RS F+ + +A D+ + LS+ ++A+ E+ G+L
Sbjct: 193 FHMPRSIEAFRAVEFDVQAYPVDWRTRGWRDAALPFDRLSSGLARMDVAVHEWAGLLAYR 252
Query: 238 YRG 240
G
Sbjct: 253 LGG 255
>gi|39936223|ref|NP_948499.1| hypothetical protein RPA3160 [Rhodopseudomonas palustris CGA009]
gi|39650078|emb|CAE28601.1| DUF218 [Rhodopseudomonas palustris CGA009]
Length = 264
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 99/243 (40%), Gaps = 11/243 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ I + L + ++L G+ + +LL L + +
Sbjct: 19 IAMICVAGLVLMLTRWWRAGRALLIGGVVLLLIAGYSPLGNVLLLSLSERFPPWH---EA 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + I++LG + +E S R+ + L + + + + G+
Sbjct: 76 GRAPDGIIVLGGAIASELSAARNALEVDA-SAERVLAALDLARRYPKARIVYSG--GSGN 132
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +AE+ + L G+ D + LE +S T +NA ++ +++ G+ +LV+SA
Sbjct: 133 LIQRSVAEAPLAGELLERFGLASDRLVLEDKSRTTAENAAYTRALVAPKPGELWLLVTSA 192
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAY 237
+H+ RS + F+ G + D+ A + L+A T++A+ E+ G+L
Sbjct: 193 FHMPRSIIAFRAAGFDVVPYPVDWRTRGSEDAARTFSTLAAGLARTDVAVHEWAGLLAYR 252
Query: 238 YRG 240
G
Sbjct: 253 LGG 255
>gi|183598370|ref|ZP_02959863.1| hypothetical protein PROSTU_01762 [Providencia stuartii ATCC 25827]
gi|188020546|gb|EDU58586.1| hypothetical protein PROSTU_01762 [Providencia stuartii ATCC 25827]
Length = 275
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 88/234 (37%), Gaps = 17/234 (7%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL--LSPQWKKDGNIIVL 71
+S +++ + +G I LL ++ ++ + ++ +D + IV+
Sbjct: 31 WFTRWQKSGKACVSMSLIVIALLGLQPISDSLLAPVEGNFDKRYELITENPPEDVHYIVV 90
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G T P + S R+ E +RLY +I G ++ +
Sbjct: 91 LGGGFTYNPD-WSPSSNLLNNSLPRVTEGVRLYLKYPGSK-----LIFTGSKANSTISSA 144
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V GV D T+ DT + A +I + +LV+SA HL R+
Sbjct: 145 EVAAMVAQSLGVPASDTIALTEPKDTQEEAFEVEKIIGK---EPFLLVTSANHLPRAISM 201
Query: 192 FQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F G+ + ++ L N + P + F +E A E IG + Y +
Sbjct: 202 FTARGMQPIPAPANQLAIKSALNPWEKYFPSAFYFSHSERAWYELIGSIWFYLK 255
>gi|332283765|ref|YP_004415676.1| membrane protein [Pusillimonas sp. T7-7]
gi|330427718|gb|AEC19052.1| membrane protein [Pusillimonas sp. T7-7]
Length = 254
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 91/245 (37%), Gaps = 14/245 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + L ++ + F L+ + P
Sbjct: 16 LCIALLLAAVVLFMVRLRKTAFVIAVAGLSWALFWSLPASSLWAGGRLEQLH--PYEQAA 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
IV+LG G T + +RI + LYK+ + +I+ G
Sbjct: 74 NAPTAQAIVVLG-GHTANGRQNWFEPYDKATAIARIDKAANLYKAQRA-----PLIVVSG 127
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E+ + N L + + I +E++S T +NA +++ ++ +NI+LV+S
Sbjct: 128 AALEGNVSEAQIMANALKQHDIPESAIIMESRSFTTHENAIYTAETLRQRHIQNILLVTS 187
Query: 182 AYHLKRSQLYFQHFGINTKA------SCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
A H+ R+ F+ GI A + P + + +KEY+G+L+
Sbjct: 188 ALHMPRAMAVFKKQGIAAIAAPLAPQIVVPDDPGFSFWQPDMRSLAASRSIVKEYVGLLV 247
Query: 236 AYYRG 240
+ RG
Sbjct: 248 YWVRG 252
>gi|167840324|ref|ZP_02467008.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis MSMB43]
Length = 204
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
N IV+LG GT +EP SYSR+ E LY+ C++
Sbjct: 2 QAPYAARPAIEWGARNAIVMLGLGTE--KIAATGAVEPGTFSYSRVVEAASLYRDCRRAR 59
Query: 112 MH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ C +I+SGGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ +++
Sbjct: 60 ANADCKLIVSGGDARRNGVPEAAVYRDALIGLGIDAADVLSEPRSMNTWQNAQFTRAVLD 119
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+ ++LV+S HL+RS LYF HFG+ ++YL A +PL+ NF + +LAL E
Sbjct: 120 GYRADRVLLVTSGIHLRRSVLYFSHFGVAATPVRAEYLQAVTFPLPLAHNFSVADLALHE 179
Query: 230 YIGILIAYY 238
Y+GI
Sbjct: 180 YLGIARYRL 188
>gi|87301698|ref|ZP_01084538.1| hypothetical protein WH5701_03449 [Synechococcus sp. WH 5701]
gi|87283915|gb|EAQ75869.1| hypothetical protein WH5701_03449 [Synechococcus sp. WH 5701]
Length = 266
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 92/238 (38%), Gaps = 18/238 (7%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + + L+ L+ R L+P G+ IV+LG G
Sbjct: 31 PRRRWSGPLGGLGLAMLWISAMPLTARELVWGLEARSAR--LTPAPVPRGDAIVVLGGGL 88
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+P ++ R+ +RL + + + + AE+I +
Sbjct: 89 R--AALPPRAGVEVNEAGDRLLSGIRLLRDQRAPLLLLSGGRVSFSGGDPAPAEAISARS 146
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF- 195
LE GV D + + Q+ T + A+ + ++ ++LV+SA H+ R+ F+
Sbjct: 147 LALELGVPADRLLVSDQARTTAEEARDLRRIGQSRGWSTVLLVTSALHMPRALASFRRQS 206
Query: 196 GINTKASCSDYLNA-------------YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ DYL S+ P + + L+ LA+KE++G+L+ RG
Sbjct: 207 GLQVVPVACDYLLPARDQLGRPTAGSVLLSLWPDAGSLLLSSLAIKEHLGLLVYRLRG 264
>gi|268678711|ref|YP_003303142.1| hypothetical protein Sdel_0069 [Sulfurospirillum deleyianum DSM
6946]
gi|268616742|gb|ACZ11107.1| protein of unknown function DUF218 [Sulfurospirillum deleyianum DSM
6946]
Length = 261
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 24/250 (9%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
IF+++ ++ +L ++FF++ + +F + + LLK L+ Y +PL
Sbjct: 20 IFILLFFFAVLYAKKFRLFFLANAV-VFYLLSNAYVADWLLKPLEEPYNQPLHVTA---- 74
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH-SMHCTIIISGGDPQ 124
+ +++LG G T + S +Y R+ + + KS K +
Sbjct: 75 VDAVIVLGGGHTQGVA----NLPLSSDAYKRMMWGLMVAKSHKLPLLFSGGGLYKEYLES 130
Query: 125 KHGLAESIVYNNKLLESGVERD-------DIKLETQSLDTFQNAQFSSSMIKNM--QGKN 175
L + L + + +E +SLDT+QNAQFS + + G
Sbjct: 131 DAFLDSLKELKSYLDIATPNSKSLATKEFSLHVEDKSLDTYQNAQFSKTAFEKAGVMGPT 190
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEY 230
I LV+SAYH+KRS + ++HFG N + +++ + + +P + Y + +AL EY
Sbjct: 191 IYLVTSAYHMKRSIMLYEHFGFNVIPAATNFKINHREKDGWDYLPSAHALYKSYIALHEY 250
Query: 231 IGILIAYYRG 240
G+L RG
Sbjct: 251 AGLLSLKLRG 260
>gi|196043859|ref|ZP_03111096.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225866795|ref|YP_002752173.1| hypothetical protein BCA_4930 [Bacillus cereus 03BB102]
gi|229187061|ref|ZP_04314210.1| hypothetical protein bcere0004_46000 [Bacillus cereus BGSC 6E1]
gi|196025195|gb|EDX63865.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225789384|gb|ACO29601.1| conserved domain protein [Bacillus cereus 03BB102]
gi|228596370|gb|EEK54041.1| hypothetical protein bcere0004_46000 [Bacillus cereus BGSC 6E1]
Length = 344
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + L+ FI + L + + + RP
Sbjct: 107 ILFFMLLPIINPASLFSPHFQPIFAGISLITLYFFIH---LSNFLSAYFLYQFNRPRC-- 161
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 162 ----NQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|209809505|ref|YP_002265043.1| hypothetical protein VSAL_II0731 [Aliivibrio salmonicida LFI1238]
gi|208011067|emb|CAQ81485.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
Length = 287
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 89/243 (36%), Gaps = 20/243 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +I L + + F ++ ++ + + I T LLK + Y
Sbjct: 21 IGFIGLFIL--WFSKRKGFASFLLTLSLVGIFLLSFQPITTPLLKSTERMYPSF---IAP 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+++LGNG + I I E S + R+ E + +Y+ + + G
Sbjct: 76 DVPVEYVLVLGNGHVVDDEISPI-SELSRAAVMRLTEGIHIYRMYPGAKLILS-----GY 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++ + + L GV + DI L + DT + A + + + N LV+SA
Sbjct: 130 SGGTTVSHARMMARVALSLGVNKSDILLLENARDTHEEAIQTLNSVGNSNLV---LVTSA 186
Query: 183 YHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R+ F + G+ + ++Y + P + +E E +G
Sbjct: 187 SHMPRAMEEFHNLGLKPTPAPTNYLAHSEIKQPWEKYAPKAKYLEQSERFWYEQMGRWFM 246
Query: 237 YYR 239
+
Sbjct: 247 DLK 249
>gi|218682013|ref|ZP_03529614.1| hypothetical protein RetlC8_24195 [Rhizobium etli CIAT 894]
Length = 262
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 97/246 (39%), Gaps = 15/246 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L ++ + LL I + L+ + +L++ L+ + +P P
Sbjct: 17 LAFFLVFLALIAGLLRWRTLSILGAAGSALILFITLYTTAGNLLMQGLEQRFTKPAADP- 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ +++LG IE + + R E +RL + Q I++SGG
Sbjct: 76 --ENLQCMIVLGGAFENEVNTARHGIEFNA-AADRFVEALRLAQKFPQS----RILVSGG 128
Query: 122 DPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
D G+ E G+ +D + ETQS TF+NA + + + + +L+
Sbjct: 129 DGSLSGVYEGDAAASERFFPLFGIGKDRLIEETQSRTTFENAVNTKEFLASQGLSHCLLI 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGIL 234
+S +H+ RS F+ G +A +DY + N A++E+ G++
Sbjct: 189 TSGFHMPRSVGIFRKLGTRYRALPTDYRTDGAVRPGLDYTQPNLNAQNMATAIREWYGLV 248
Query: 235 IAYYRG 240
Y G
Sbjct: 249 GYYLAG 254
>gi|261755996|ref|ZP_05999705.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261745749|gb|EEY33675.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 263
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMSRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|238792388|ref|ZP_04636022.1| hypothetical protein yinte0001_13160 [Yersinia intermedia ATCC
29909]
gi|238728314|gb|EEQ19834.1| hypothetical protein yinte0001_13160 [Yersinia intermedia ATCC
29909]
Length = 255
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 91/240 (37%), Gaps = 20/240 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
++ W Q K F + L+ I + LL L+ Y + Q
Sbjct: 25 LALILLWFTRWQKSGKTLF-ALSWLVLLLISLQPVADRLLLPLEKPYA----TYQGNDPV 79
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RLY++ M T G +
Sbjct: 80 DYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGVRLYRAHPSAKMVFT-----GSAGPN 133
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI Q DT + A ++++ + LV+SA HL
Sbjct: 134 KQSSAATAAQVAESLGVPVADIIALEQPKDTVEEAAAVAALVGDKPFL---LVTSANHLP 190
Query: 187 RSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +F G++ + ++ L+++ IP +A E A E +G+L G
Sbjct: 191 RAIKFFTAIGLHPIPAPANQLAITTPLHSWERAIPAAAWLGHAERAWYETLGLLWQKLSG 250
>gi|317491475|ref|ZP_07949911.1| hypothetical protein HMPREF0864_00674 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316921022|gb|EFV42345.1| hypothetical protein HMPREF0864_00674 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 256
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 92/236 (38%), Gaps = 19/236 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++ W Q + KI +S L + I LL L+ Y + + +
Sbjct: 27 LIFMWWTRWQRLGKI-CISLAWLGILLLSLQPIADRLLAPLENHYP----TINTPSNADY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +R + + + II +G + +
Sbjct: 82 IVVLGGGYTFNPD-WAPSSNLINNSLPRVTEGVR----QLELNPNAKIIFTGAAAISNPI 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V N GV + I + + DT Q AQ + +++ + LV+SA HL R+
Sbjct: 137 SSAQVAANVAKSLGVPAERIIILDKPRDTQQEAQEVAKIVQKQRLL---LVTSANHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+F+ ++ + ++ LN + +P +E A E +G
Sbjct: 194 LRFFKAEALDPIPAPANQLAISSPLNPWERWLPSPLYLGHSERAWYETLGSWWQAL 249
>gi|228917456|ref|ZP_04081005.1| hypothetical protein bthur0012_46660 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228842128|gb|EEM87227.1| hypothetical protein bthur0012_46660 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 298
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 61 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 113
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 114 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 163
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ K I
Sbjct: 164 GQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMLFSKEIMDSLKPNGKYKSI 223
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 224 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 270
>gi|157961268|ref|YP_001501302.1| hypothetical protein Spea_1442 [Shewanella pealeana ATCC 700345]
gi|157846268|gb|ABV86767.1| protein of unknown function DUF218 [Shewanella pealeana ATCC
700345]
Length = 256
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 12/205 (5%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ LL L+ Y ++ Q + ++++LG+G A++ + S + +
Sbjct: 49 LSSSWGSNWLLAPLEEQYS---VNNQPIANSCLVMVLGSGHDENANFTAVQ-QLSNTALA 104
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +R +C +++SG + + V + +E GV I +
Sbjct: 105 RLTEGVR----QLSLGQNCKLVVSGWSGGLSTRSHADVMFDAAVELGVSPKAIIKLPLAQ 160
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-LNAYYSII 214
DT + AQF ++ LV+SA H+ R+ F + +N A+ +D+ A Y
Sbjct: 161 DTIEEAQFMKWEVE---DAPFRLVTSASHMPRAMAIFTNAKLNVVAAPTDFAQRASYWWR 217
Query: 215 PLSANFYLTELALKEYIGILIAYYR 239
+ + ++ A+ EY+G+L +
Sbjct: 218 FDAQSLLSSQRAIHEYLGLLWFKLK 242
>gi|23501020|ref|NP_697147.1| hypothetical protein BR0106 [Brucella suis 1330]
gi|163842380|ref|YP_001626784.1| hypothetical protein BSUIS_A0110 [Brucella suis ATCC 23445]
gi|254705285|ref|ZP_05167113.1| hypothetical protein Bsuib36_15473 [Brucella suis bv. 3 str. 686]
gi|23346882|gb|AAN29062.1| conserved hypothetical protein [Brucella suis 1330]
gi|163673103|gb|ABY37214.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
Length = 272
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMSRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|220935563|ref|YP_002514462.1| integral membrane protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996873|gb|ACL73475.1| integral membrane protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 250
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 102/248 (41%), Gaps = 26/248 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI----FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
+ + L ++ +L R ++ +++ G G + LL L++ Y P
Sbjct: 10 LPSGLLVLCLAGALVLSPWRRMRPGAAGLVALAAVIYLVFGSGPVAHALLGGLEYRYPAP 69
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P+ + IV+L ++ + + + R+ E L + + I
Sbjct: 70 ENMPE----LDHIVVL-AAYGAHDPRVSVINQVNSHALIRLVEASLLAREHPEA-----I 119
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ G G + + L+ GV I++E S +TF++ + + ++ +
Sbjct: 120 LTVTG-----GGEVPKLMADVLIVLGVPESRIRVEALSSNTFES---ALHLQAELKDQRF 171
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI----IPLSANFYLTELALKEYIG 232
LV+SA H+ R+ + F+ G+ + +DYL+ + N L++LA+ EYI
Sbjct: 172 ALVTSAGHMSRAMMVFRGQGLEPIPAPTDYLSFADIWSAQIMAKPGNLLLSDLAIHEYIA 231
Query: 233 ILIAYYRG 240
++ +RG
Sbjct: 232 LVWYRWRG 239
>gi|118479923|ref|YP_897074.1| hypothetical protein BALH_4367 [Bacillus thuringiensis str. Al
Hakam]
gi|118419148|gb|ABK87567.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 350
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + L+ FI + L + + + RP
Sbjct: 113 ILFFMLLPIINPASLFSPHFQPIFAGISLITLYFFIH---LSNFLSAYFLYQFNRPRC-- 167
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 168 ----NQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 215
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 216 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 275
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 276 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 322
>gi|115525420|ref|YP_782331.1| hypothetical protein RPE_3419 [Rhodopseudomonas palustris BisA53]
gi|115519367|gb|ABJ07351.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 267
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 15/245 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + + L ++ + L G+ + LL L +
Sbjct: 19 IALVCAFGAVLALTRWRRAGSRILALGIGLLLVAGYSPLGNALLLVLTERFPSW---QAE 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + IV+LG + +E + S R+F + L + + I+ +GG
Sbjct: 76 GRAPDGIVVLGGSIDSDISAARNALE-TDASAERVFAMLDLARRYP----NARIVFTGGS 130
Query: 123 PQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
AE+ V L + G+ D I LE+ S T +NA + ++ G+ +LV+
Sbjct: 131 ANLIGDTAAEAPVAGQLLEQFGIAPDRIVLESGSRTTAENATMTRDLVAPKPGERWLLVT 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILI 235
SA+H+ RS F+ G +A D+ + LSA ++A+ E++G++
Sbjct: 191 SAFHMPRSIGVFRAIGFEVEAYPVDWRTRGWIDLRWPFGKLSAGLARIDVAVHEWVGLIA 250
Query: 236 AYYRG 240
G
Sbjct: 251 YRLTG 255
>gi|312881496|ref|ZP_07741288.1| hypothetical protein VIBC2010_02326 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370862|gb|EFP98322.1| hypothetical protein VIBC2010_02326 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 254
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 92/229 (40%), Gaps = 19/229 (8%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q + + F+ LF + I + LL L+ Y + + +++LG+G
Sbjct: 22 KQKTGCVIVLFSFIGLF-LASFQPISSRLLMPLERQYTAFF---PIDEPIDYVMVLGSGH 77
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ IP E S R+ E +R+ + + + G ++ + +
Sbjct: 78 IVDDKIP-PTSELSRSGLMRLAEGIRILRMYPGSKLILS-----GYAAGSDVSNARMMAK 131
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L GV + DI L + DT++ A+ +++ + N I+V+SA ++KR+ F G
Sbjct: 132 VALALGVAKPDIILLETAKDTWEEARQAAAFVNNKNL---IVVTSASNMKRALNEFYSAG 188
Query: 197 INTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + ++YL + P S TEL E +G + R
Sbjct: 189 LKPYPAPTNYLAQKNIDTPWVKYTPKSTYLEQTELYWHETLGRIWQNLR 237
>gi|196041486|ref|ZP_03108779.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|196027734|gb|EDX66348.1| conserved domain protein [Bacillus cereus NVH0597-99]
Length = 345
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +F I+S L + IF ++++ FI + L + + + RP
Sbjct: 108 ILFFILFAILSPASLFSSHLEPIFAGISLIIVYFFIH---LSNFLTAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 211 GQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|260772652|ref|ZP_05881568.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
gi|260611791|gb|EEX36994.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
Length = 268
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 19/241 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
I I + + + F L I + + + LL L+ Y L
Sbjct: 21 IGFIGLMLIMFTAKRKTGCLVVLFCLSSLLVISFQPVSSRLLMPLERQYSAFLPIE---G 77
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ +++LGNG + +IP E + + R+ E +R+ + + + G
Sbjct: 78 TVDYVMVLGNGHVVDDSIP-PTSELTRAALMRLSEGIRVMRMYPGAKLILS-----GYAG 131
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++ + + L GV + DI L + DT++ A+ +++ ++ LV+SA H
Sbjct: 132 GSEMSHARMLAKVALALGVAKSDIILLETAQDTWEEARQAAAFVQQRTLV---LVTSASH 188
Query: 185 LKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R+ FQ G+ + ++YL A+ IP + TE E +G++
Sbjct: 189 MPRAMNEFQSAGLTPIPAPTNYLAQTNISQAWDKYIPRALYLEQTERYWYETMGLIWQTM 248
Query: 239 R 239
R
Sbjct: 249 R 249
>gi|229093911|ref|ZP_04225003.1| hypothetical protein bcere0021_46320 [Bacillus cereus Rock3-42]
gi|228689472|gb|EEL43285.1| hypothetical protein bcere0021_46320 [Bacillus cereus Rock3-42]
Length = 298
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 61 ILFFMLLPIISPASLFSSHLAPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 113
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 114 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 163
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 164 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 223
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 224 FTTNNFHLFRAGIYAKQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 270
>gi|88801181|ref|ZP_01116724.1| hypothetical protein MED297_12227 [Reinekea sp. MED297]
gi|88776084|gb|EAR07316.1| hypothetical protein MED297_12227 [Reinekea sp. MED297]
Length = 261
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/243 (19%), Positives = 92/243 (37%), Gaps = 12/243 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LLS FL L + R + + IG+ + L+ L+ ++ P
Sbjct: 21 LLLSGAFLAWFLRSRLPRVTRWLSVLVILA--LLLIGFYPVGAWLVYPLEHRFKPPNTEQ 78
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG ++ + E + + R + L + + + T
Sbjct: 79 AP----DGIIVLGGAWRTQSSVYWGQWELN-HAAERDLAMLALARRFPEAELVFTG--GS 131
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V + G+ ++ E++S +T++NA+FS +I LV+
Sbjct: 132 GKLFSQQFKEADVARQLYSDLGLNPVRVQFESESRNTYENARFSQKLINPDVADIWWLVT 191
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS---ANFYLTELALKEYIGILIAY 237
SAYH+ R+ F G D+ S P + + E +E++G+ +
Sbjct: 192 SAYHMTRATEVFCGIGWRVVPYPVDHFYEPGSWRPNWAFADHLWELERVSREWLGLWVYR 251
Query: 238 YRG 240
G
Sbjct: 252 ATG 254
>gi|330938257|gb|EGH41926.1| hypothetical protein PSYPI_05668 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 256
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + L+ P
Sbjct: 16 ILFVLLILGWWLRRTRPRLAATFFAVGLGGLWLMSLPVAVEFAARKLEQVPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ SGG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARLAKE-----SGLPILTSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA S+++++ K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSLQDDFAVAVRWQEGL-SRTTWENATMSAAILQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G + +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|254718327|ref|ZP_05180138.1| hypothetical protein Bru83_02063 [Brucella sp. 83/13]
gi|265983286|ref|ZP_06096021.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837219|ref|ZP_07470109.1| protein of unknown function DUF218 [Brucella sp. NF 2653]
gi|264661878|gb|EEZ32139.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306407678|gb|EFM63867.1| protein of unknown function DUF218 [Brucella sp. NF 2653]
Length = 263
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|148560500|ref|YP_001258145.1| hypothetical protein BOV_0103 [Brucella ovis ATCC 25840]
gi|254700918|ref|ZP_05162746.1| hypothetical protein Bsuib55_08674 [Brucella suis bv. 5 str. 513]
gi|254709259|ref|ZP_05171070.1| hypothetical protein BpinB_03136 [Brucella pinnipedialis B2/94]
gi|254716328|ref|ZP_05178139.1| hypothetical protein BcetM_07820 [Brucella ceti M13/05/1]
gi|256158803|ref|ZP_05456664.1| hypothetical protein BcetM4_07968 [Brucella ceti M490/95/1]
gi|261218109|ref|ZP_05932390.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221336|ref|ZP_05935617.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314677|ref|ZP_05953874.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316765|ref|ZP_05955962.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321044|ref|ZP_05960241.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751433|ref|ZP_05995142.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261759222|ref|ZP_06002931.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987836|ref|ZP_06100393.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265997296|ref|ZP_06109853.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294851511|ref|ZP_06792184.1| hypothetical protein BAZG_00416 [Brucella sp. NVSL 07-0026]
gi|148371757|gb|ABQ61736.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|260919920|gb|EEX86573.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260923198|gb|EEX89766.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293734|gb|EEX97230.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295988|gb|EEX99484.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303703|gb|EEY07200.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261739206|gb|EEY27202.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261741186|gb|EEY29112.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262551764|gb|EEZ07754.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264660033|gb|EEZ30294.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294820100|gb|EFG37099.1| hypothetical protein BAZG_00416 [Brucella sp. NVSL 07-0026]
Length = 263
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|225626650|ref|ZP_03784689.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254707196|ref|ZP_05169024.1| hypothetical protein BpinM_09538 [Brucella pinnipedialis
M163/99/10]
gi|254713318|ref|ZP_05175129.1| hypothetical protein BcetM6_08187 [Brucella ceti M644/93/1]
gi|256030782|ref|ZP_05444396.1| hypothetical protein BpinM2_09053 [Brucella pinnipedialis
M292/94/1]
gi|256254188|ref|ZP_05459724.1| hypothetical protein BcetB_07825 [Brucella ceti B1/94]
gi|256368571|ref|YP_003106077.1| hypothetical protein BMI_I109 [Brucella microti CCM 4915]
gi|260169686|ref|ZP_05756497.1| hypothetical protein BruF5_15273 [Brucella sp. F5/99]
gi|225618307|gb|EEH15350.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|255998729|gb|ACU47128.1| hypothetical protein BMI_I109 [Brucella microti CCM 4915]
Length = 272
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|53724817|ref|YP_102769.1| hypothetical protein BMA1073 [Burkholderia mallei ATCC 23344]
gi|67641348|ref|ZP_00440128.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|121599410|ref|YP_992846.1| hypothetical protein BMASAVP1_A1516 [Burkholderia mallei SAVP1]
gi|124385403|ref|YP_001026188.1| hypothetical protein BMA10229_A0183 [Burkholderia mallei NCTC
10229]
gi|134282282|ref|ZP_01768987.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|167003067|ref|ZP_02268857.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|167719831|ref|ZP_02403067.1| hypothetical protein BpseD_12495 [Burkholderia pseudomallei DM98]
gi|254178040|ref|ZP_04884695.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254188599|ref|ZP_04895110.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254199716|ref|ZP_04906082.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254206038|ref|ZP_04912390.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|254358413|ref|ZP_04974686.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|52428240|gb|AAU48833.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|121228220|gb|ABM50738.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124293423|gb|ABN02692.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|134246320|gb|EBA46409.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|147749312|gb|EDK56386.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|147753481|gb|EDK60546.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|148027540|gb|EDK85561.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|157936278|gb|EDO91948.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|160699079|gb|EDP89049.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|238522267|gb|EEP85712.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|243061318|gb|EES43504.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
Length = 240
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ L I G + L+ L + +P+ P
Sbjct: 2 ILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVA-LAQAGMQPVAHP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D +IV+LG G + P + +RI +T LY +C++ + CT+++SG
Sbjct: 61 TMTGD-TVIVMLGAGIERRDGVA----IPPRDALARIDKTAELYSACRRTAQRCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++ILV+
Sbjct: 116 GDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+ +
Sbjct: 176 SSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|237812033|ref|YP_002896484.1| hypothetical protein GBP346_A1775 [Burkholderia pseudomallei
MSHR346]
gi|237506357|gb|ACQ98675.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
Length = 240
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ L I G + L+ L + +P+ P
Sbjct: 2 ILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVA-LAQAGMQPVAHP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D +IV+LG G + P + +RI +T LY +C++ + CT+++SG
Sbjct: 61 TMTGD-TVIVMLGAGIERRDGVA----IPPRDALARIDKTAELYSACRRTAQRCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++ILV+
Sbjct: 116 GDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+ +
Sbjct: 176 SSYQMKRALLDFERFGFAPQPVYANRRDARPGWLPRAANLANAELALHEIVGVAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|17988125|ref|NP_540759.1| hypothetical protein BMEI1842 [Brucella melitensis bv. 1 str. 16M]
gi|256045898|ref|ZP_05448772.1| hypothetical protein Bmelb1R_15424 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112611|ref|ZP_05453532.1| hypothetical protein Bmelb3E_08010 [Brucella melitensis bv. 3 str.
Ether]
gi|256264843|ref|ZP_05467375.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260563183|ref|ZP_05833669.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265992310|ref|ZP_06104867.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994051|ref|ZP_06106608.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17983881|gb|AAL53023.1| putative membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|260153199|gb|EEW88291.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262765032|gb|EEZ10953.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263003376|gb|EEZ15669.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263095299|gb|EEZ18926.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326408125|gb|ADZ65190.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326537837|gb|ADZ86052.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 263
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|260567250|ref|ZP_05837720.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260156768|gb|EEW91848.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 263
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMSRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAAHFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|224373337|ref|YP_002607709.1| hypothetical protein NAMH_1317 [Nautilia profundicola AmH]
gi|223588336|gb|ACM92072.1| conserved hypothetical protein [Nautilia profundicola AmH]
Length = 240
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 23/245 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L IF+I+ + + KI F S +LL++ I + LL L+ Y+ ++P
Sbjct: 12 LLPPGIFVIILFLAAIFAKKAKIVFFSAAVLLWA-ISTKFVANALLYPLEHGYKSDTITP 70
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+V+LG GT + A+ ++ R + + K I G
Sbjct: 71 S------AVVVLGGGTNSRDVLKAM-----PDAFKREVYGLLIAKQ----ESLPYIFTGG 115
Query: 121 GDPQ-KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIIL 178
G K + L + + E +SL+TFQNA++++ + + + K I L
Sbjct: 116 GIQNIKEAENIKKDIDMILKTCNCDIET-FYENRSLNTFQNAKYTAKLFEKLNLSKKIYL 174
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGIL 234
V+SAYH+KR+ + F +FG + ++ I P + NFY + A+ EY G++
Sbjct: 175 VTSAYHMKRAIMIFNNFGFQIIPKPVGFYYDNEYTFWDIFPNAGNFYHSYKAIHEYFGLI 234
Query: 235 IAYYR 239
Y R
Sbjct: 235 KTYLR 239
>gi|167894539|ref|ZP_02481941.1| hypothetical protein Bpse7_12379 [Burkholderia pseudomallei 7894]
Length = 240
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 122/243 (50%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ L I G + L+ L + +P+ P
Sbjct: 2 ILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVA-LAQAGMQPVAHP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D +IV+LG G + P + +RI +T LY +C++ ++ CT+++SG
Sbjct: 61 TMTGD-TVIVMLGAGIERRDGVA----IPPRDALARIDKTAELYSACRRTALRCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++ILV+
Sbjct: 116 GDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+ +
Sbjct: 176 SSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|161618094|ref|YP_001591981.1| hypothetical protein BCAN_A0109 [Brucella canis ATCC 23365]
gi|161334905|gb|ABX61210.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
Length = 272
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMSRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAAHFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|90407003|ref|ZP_01215193.1| putative membrane protein [Psychromonas sp. CNPT3]
gi|90311874|gb|EAS39969.1| putative membrane protein [Psychromonas sp. CNPT3]
Length = 267
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 100/243 (41%), Gaps = 19/243 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ + +++ L +K+ F + + + ++ L+ +L
Sbjct: 17 LPFFFCLFLMALILLFFTKKQKMAKFLLIVSFVFLFVASYRPFSASFVQTLERE-NVAML 75
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+D + I+LLG+ T T+P I + S + SR E +RLY++ + T+I+
Sbjct: 76 ETDTAQDLDYILLLGSSGTFDATLP-ITGQLSATALSRFIEALRLYQANP----NATLIV 130
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG + + + L+ + + I ++ DT +I+ + L
Sbjct: 131 SGGSFGDEK-SHAQLLEELALQFAIPLNHIIRIDEAKDTDDEIAAMQKIIRGKKAA---L 186
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-------YSIIPLSANFYLTELALKEYI 231
V+SA H+ R+ F+ G++ + + YL Y Y +P S T +A EY+
Sbjct: 187 VTSATHMPRALSLFKAQGLSPIPAPAHYLAPYSKTVLPSYRKLPSSLALRHTTIAWHEYL 246
Query: 232 GIL 234
G L
Sbjct: 247 GAL 249
>gi|225851646|ref|YP_002731879.1| hypothetical protein BMEA_A0113 [Brucella melitensis ATCC 23457]
gi|225640011|gb|ACN99924.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
Length = 272
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|316933607|ref|YP_004108589.1| hypothetical protein Rpdx1_2264 [Rhodopseudomonas palustris DX-1]
gi|315601321|gb|ADU43856.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 264
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 11/243 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ I + L + ++L G+ + +LL L Y
Sbjct: 19 IAMICVAGLVLLLTRWRRAGRALLIGGVVLLLIAGYSPLGNVLLLSLSERYPPWH---DT 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + I++LG + +E S R+ T+ L + Q + + G+
Sbjct: 76 GRAPDGIIVLGGAINSEVSAARNTVELDA-SAERVLATLDLARRYPQARIVYSG--GSGN 132
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ AE+ + L G+ + LE QS T +NA + +++ G+ +LV+S+
Sbjct: 133 LIQRSAAEAPLAGELLERFGLAAGRVVLEDQSRTTAENAANTRALVSPKPGELWLLVTSS 192
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIAY 237
+H+ RS + FQ G + A D+ L+A T++A E+ G+L
Sbjct: 193 FHMPRSIMAFQAAGFDVVAYPVDWRTRGREDVALPFATLAAGLARTDVAAHEWAGLLAYR 252
Query: 238 YRG 240
G
Sbjct: 253 LGG 255
>gi|163783486|ref|ZP_02178477.1| hypothetical protein HG1285_08734 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881250|gb|EDP74763.1| hypothetical protein HG1285_08734 [Hydrogenivirga sp. 128-5-R1-1]
Length = 239
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 23/243 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF-MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ + +L + + I+ L I +L L+ ++ P
Sbjct: 13 LPPGIFIALFLLIAVLSRKRKLIYVPALAGALALYLISVEPFKDVLFYPLESPFKTP--- 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ G++IV+LG G SY R+ L++ + +I
Sbjct: 70 --KRIRGDVIVVLGGGAYNS-------GYLKASSYKRLIAGFLLHRRTGKP------LIL 114
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + E+ V LLE GVE DI + +S DT++NA++ ++ + + ++I LV
Sbjct: 115 SGGAAIGVIPEAKVMKELLLEFGVEEKDIYADLRSRDTYENAKYVRNICEKIGCRSITLV 174
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILI 235
+SA+H++R+ + F+ G+ + +D YS P + FY + +A++EY+G+L
Sbjct: 175 TSAFHMRRALMVFKKTGLEVQPYPTDLKFEGRYNLYSAFPKYSVFYDSSIAIREYVGLLF 234
Query: 236 AYY 238
Sbjct: 235 YSL 237
>gi|66047577|ref|YP_237418.1| hypothetical protein Psyr_4350 [Pseudomonas syringae pv. syringae
B728a]
gi|63258284|gb|AAY39380.1| Protein of unknown function DUF218 [Pseudomonas syringae pv.
syringae B728a]
Length = 256
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + L+ P
Sbjct: 16 ILFVLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARRLEQIPPLPQQRWAM 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ SGG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARLAKE-----SGLPILTSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA S+++++ K ++LV+
Sbjct: 130 LHFDQPPSEAAIMAQSLQDDFAVTVRWQEGL-SRTTWENATMSAAILQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G + +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGMLLNEAAGLLVY 248
>gi|217976941|ref|YP_002361088.1| protein of unknown function DUF218 [Methylocella silvestris BL2]
gi|217502317|gb|ACK49726.1| protein of unknown function DUF218 [Methylocella silvestris BL2]
Length = 264
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 95/246 (38%), Gaps = 12/246 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWG-IIPTILLKHLQFSYQRPLLS 59
+ + ++ + + R ++ + + + LL ++ +
Sbjct: 16 LTFLILLALIGVVLMFTRFWRAGRALAAAGAFAMALLFLTPVGVALLLPMENRF---PPP 72
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P I++LG ++ + R+ + L K + T
Sbjct: 73 PVDLPAPTGIIVLGGALNQSRSVARGQATFGGDG-ERLIAGIELSKRYPSARLVFTG--G 129
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G+ + + ES L+ GV D ++ E++S +T++NA F+ +++ G+ +LV
Sbjct: 130 SGNLVEQTIVESTGVKKFWLDMGVPPDRMEFESRSRNTWENALFTRDLLRPKPGETWLLV 189
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGIL 234
+SA+H+ RS F+ G + A Y + + + P L LA +E+IG+L
Sbjct: 190 TSAWHMPRSMGIFRRLGFDVIAYPVAYRTSGDSSDWSFLRPAFERVPLVVLAFREWIGLL 249
Query: 235 IAYYRG 240
G
Sbjct: 250 AYRLTG 255
>gi|115380347|ref|ZP_01467350.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115362646|gb|EAU61878.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 233
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 89/218 (40%), Gaps = 10/218 (4%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+ + + L++ ++ + + + + +++LG G T + R
Sbjct: 18 VLGLAVLYTFSIEPVAGGLMRWVE---SGAKETYRPEVVYDAVIVLGGGLDPDATERSGR 74
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
E + + RI L + + + + D + + E+ V +LL G+ +
Sbjct: 75 PEYNA-AVERILRGYELLREGRARHVLLSG--GSLDTRPEAVIEATVLQRQLLAWGIAPE 131
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E S +T +NA S +I+ K ++L++SA HL R+ F G+ +D
Sbjct: 132 RIVVEGHSRNTRENALDSKKLIEERGWKTLLLITSAAHLPRAYGCFAAVGLRPDTLAADV 191
Query: 207 LNA----YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ S +P + + + AL+E G ++ RG
Sbjct: 192 RASDGKRPPSWLPRANHLSASTDALRELAGRVVYRLRG 229
>gi|228929853|ref|ZP_04092868.1| hypothetical protein bthur0010_45360 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228948549|ref|ZP_04110829.1| hypothetical protein bthur0007_46750 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229124367|ref|ZP_04253555.1| hypothetical protein bcere0016_46510 [Bacillus cereus 95/8201]
gi|228659019|gb|EEL14671.1| hypothetical protein bcere0016_46510 [Bacillus cereus 95/8201]
gi|228811148|gb|EEM57489.1| hypothetical protein bthur0007_46750 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228829769|gb|EEM75391.1| hypothetical protein bthur0010_45360 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 298
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 61 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 113
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 114 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 163
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 164 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 223
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 224 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 270
>gi|291278482|ref|YP_003495317.1| hypothetical protein DEFDS_0049 [Deferribacter desulfuricans SSM1]
gi|290753184|dbj|BAI79561.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 237
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 23/244 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI-FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
++ +F++++ + I F+ L+ F+ ILL L ++ S
Sbjct: 12 LIPPGVFILINLILAFLTKEKLIKRFLIFSALIIYFLSISPTKDILLYPLIVKFEDKKCS 71
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
D + +V+LG G E S R+ E + K + II+S
Sbjct: 72 -----DFDAVVILGGGVYAD-------GELKEDSLKRLVEGYLIAKK-----ANKPIILS 114
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG K+ ES++ NKLL G + + I ++ S DT +NA F +I ++L+
Sbjct: 115 GGKVFKNLEPESLIMRNKLLNLGFDGE-IFIDDTSKDTNENATFVKKIIAANNFNKVLLI 173
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILI 235
+S YH RS++ F+ GIN+ D + +P+++N + +KEY+GIL
Sbjct: 174 TSGYHAMRSKMLFEKHGINSCVVLVDKKIDKKYNFVDFLPVASNLHTISKVIKEYLGILY 233
Query: 236 AYYR 239
+
Sbjct: 234 YSMK 237
>gi|218661819|ref|ZP_03517749.1| hypothetical protein RetlI_21178 [Rhizobium etli IE4771]
Length = 214
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
+L++ L+ + +P P ++ +++LG IE + + R E +R
Sbjct: 10 QLLMQGLEQRFPKPARDP---ENMQCMIVLGGAFENEVNTARHSIEFNA-AADRFVEALR 65
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQN 160
L + Q I++SGGD G+ E G+ +D + E QS TF+N
Sbjct: 66 LAQKFPQS----RILVSGGDGSLSGIYEGDAAASERFFPLFGIGKDRLIEERQSRTTFEN 121
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIP 215
A + + + + +L++S +H+ RS F+ GI+ +DY
Sbjct: 122 AVNTKEFLASQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQ 181
Query: 216 LSANFYLTELALKEYIGILIAYYRG 240
+ N A++E+ G++ Y G
Sbjct: 182 PNLNAQNMATAIREWYGLVGYYLAG 206
>gi|196228088|ref|ZP_03126955.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196227491|gb|EDY21994.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 265
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/246 (17%), Positives = 93/246 (37%), Gaps = 14/246 (5%)
Query: 3 LSWIFLIVS-YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+W+ L+V +W + + ++L + +G + +L L+ Y +
Sbjct: 18 LTWLCLLVLTFWLAFKRQRGPAILAALGVILVTAVGSTSLAGRMLGSLERPYA--GVKID 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV+LG G P+ Q+ R+ +Y+ K + ++
Sbjct: 76 ELPKADAIVMLGGG--SAPSRYEALGVHLTQAGDRLVMAHEVYRLGKAPVLLLGGNVNKL 133
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D + +E + + G+ D + ++ DT A ++++ K ++LV+S
Sbjct: 134 DGVRKFESE--IVRDLFKTWGIPEDAMIPLGENQDTHDEALKTAALAKEHGWHRVLLVTS 191
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLN-------AYYSIIPLSANFYLTELALKEYIGIL 234
A H++R+ + G+ ++L +P F + L E IG
Sbjct: 192 ASHMRRASGVLRAQGLEVIPVPCNFLTTVATAPPPPGLSVPRYDGFVKIAIWLHEEIGWY 251
Query: 235 IAYYRG 240
+RG
Sbjct: 252 TYRHRG 257
>gi|322616420|gb|EFY13329.1| hypothetical protein SEEM315_12463 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619670|gb|EFY16545.1| hypothetical protein SEEM971_17457 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622634|gb|EFY19479.1| hypothetical protein SEEM973_13500 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629783|gb|EFY26558.1| hypothetical protein SEEM974_05201 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632495|gb|EFY29241.1| hypothetical protein SEEM201_14830 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637010|gb|EFY33713.1| hypothetical protein SEEM202_02105 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641450|gb|EFY38088.1| hypothetical protein SEEM954_01478 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646084|gb|EFY42600.1| hypothetical protein SEEM054_01055 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649614|gb|EFY46045.1| hypothetical protein SEEM675_15999 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654084|gb|EFY50407.1| hypothetical protein SEEM965_12752 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658616|gb|EFY54878.1| hypothetical protein SEEM19N_16617 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663473|gb|EFY59675.1| hypothetical protein SEEM801_11907 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670209|gb|EFY66349.1| hypothetical protein SEEM507_18684 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671445|gb|EFY67567.1| hypothetical protein SEEM877_09693 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676801|gb|EFY72868.1| hypothetical protein SEEM867_07841 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682726|gb|EFY78745.1| hypothetical protein SEEM180_06892 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686405|gb|EFY82387.1| hypothetical protein SEEM600_05870 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195928|gb|EFZ81095.1| hypothetical protein SEEM581_13156 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199784|gb|EFZ84873.1| hypothetical protein SEEM501_09338 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202777|gb|EFZ87813.1| hypothetical protein SEEM460_08274 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209048|gb|EFZ93985.1| hypothetical protein SEEM020_20040 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211524|gb|EFZ96363.1| hypothetical protein SEEM6152_19328 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217991|gb|EGA02706.1| hypothetical protein SEEM0077_06149 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222903|gb|EGA07253.1| hypothetical protein SEEM0047_13265 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226597|gb|EGA10802.1| hypothetical protein SEEM0055_10125 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229793|gb|EGA13916.1| hypothetical protein SEEM0052_13182 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233018|gb|EGA17114.1| hypothetical protein SEEM3312_03134 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240753|gb|EGA24795.1| hypothetical protein SEEM5258_12744 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243069|gb|EGA27090.1| hypothetical protein SEEM1156_20594 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249768|gb|EGA33670.1| hypothetical protein SEEM9199_12237 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252759|gb|EGA36597.1| hypothetical protein SEEM8282_16778 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257198|gb|EGA40899.1| hypothetical protein SEEM8283_02209 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259996|gb|EGA43624.1| hypothetical protein SEEM8284_18093 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323268003|gb|EGA51482.1| hypothetical protein SEEM8285_13226 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269851|gb|EGA53300.1| hypothetical protein SEEM8287_20649 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 258
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRNDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|168822078|ref|ZP_02834078.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|197247984|ref|YP_002145908.1| hypothetical protein SeAg_B0996 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197211687|gb|ACH49084.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205341539|gb|EDZ28303.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320085232|emb|CBY95017.1| Uncharacterized protein ycbC [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 258
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAVAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|150398639|ref|YP_001329106.1| hypothetical protein Smed_3453 [Sinorhizobium medicae WSM419]
gi|150030154|gb|ABR62271.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 262
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 87/231 (37%), Gaps = 15/231 (6%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + + L+ L+ + RP P +++LG
Sbjct: 32 RFRRTGGGISVFGLAVLFITLFTTAGSYFLQILEDRFPRPSPEPAELA---CMIVLGGAF 88
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA--ESIVY 134
+ IE + Q+ R ET+RL ++ I++SGGD G+ ++
Sbjct: 89 ENVVMASRGGIEMN-QAAERFVETLRLARAHP----GARILVSGGDGSLSGIYEGDAHAS 143
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
G+ + + E +S TF+NA+ + +++ LV+SAYH+ RS F+
Sbjct: 144 AAFFGTFGIGPERLIREGESRTTFENARNTRHLLRENGLDRCALVTSAYHMPRSVGLFRA 203
Query: 195 FGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAYYRG 240
I DY + S N L A KE+ G+L Y G
Sbjct: 204 NDIEVTPWPVDYRTSGKVRLGVDFTQPSLNAQLATTAAKEWTGLLAYYLLG 254
>gi|204929871|ref|ZP_03220892.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320865|gb|EDZ06066.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 258
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRNDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|82701477|ref|YP_411043.1| hypothetical protein Nmul_A0343 [Nitrosospira multiformis ATCC
25196]
gi|82409542|gb|ABB73651.1| Protein of unknown function DUF218 [Nitrosospira multiformis ATCC
25196]
Length = 251
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 17/208 (8%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
I+ LL+ L+ P + I++LG GT + R
Sbjct: 52 STPIVADALLQVLET----PSEKNPFDDTIQAIIVLGGGTYYYAPEY-GDHTVGRYTLER 106
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL-LESGVERDDIKLETQSL 155
+ ++Y+ I+ +GG P + +E++ L E V + +E S
Sbjct: 107 VRYAAKIYRL-----TGKPILTAGGAPLGNHSSEAMQMKAVLEEEFLVPVE--WVEETSS 159
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD----YLNAYY 211
+T +NA S ++++ + I LV+ A+H+ R+ F+ G + + Y
Sbjct: 160 NTRENAYKSFAILQKQGIRQIALVTHAWHMPRAAREFEQAGFEVTPAATGYTRRYKTDLL 219
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYR 239
+ IP + + L E IGIL
Sbjct: 220 TFIPNAGALLKSSLFFHEVIGILWYRLM 247
>gi|53719541|ref|YP_108527.1| hypothetical protein BPSL1927 [Burkholderia pseudomallei K96243]
gi|126452373|ref|YP_001066022.1| hypothetical protein BURPS1106A_1753 [Burkholderia pseudomallei
1106a]
gi|167816053|ref|ZP_02447733.1| hypothetical protein Bpse9_12987 [Burkholderia pseudomallei 91]
gi|167824429|ref|ZP_02455900.1| hypothetical protein Bpseu9_12213 [Burkholderia pseudomallei 9]
gi|167845961|ref|ZP_02471469.1| hypothetical protein BpseB_11780 [Burkholderia pseudomallei B7210]
gi|226199704|ref|ZP_03795257.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242315371|ref|ZP_04814387.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254179990|ref|ZP_04886589.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|254297823|ref|ZP_04965276.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|52209955|emb|CAH35927.1| putative exported protein [Burkholderia pseudomallei K96243]
gi|126226015|gb|ABN89555.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|157807296|gb|EDO84466.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|184210530|gb|EDU07573.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|225928290|gb|EEH24324.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242138610|gb|EES25012.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
Length = 240
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ L I G + L+ L + +P+ P
Sbjct: 2 ILFNSFGLLFVVFLLCRKPRGAFAILAAGAALLWLIASGWLAAPLVA-LAQAGMQPVAHP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D +IV+LG G + P + +RI +T LY +C++ + CT+++SG
Sbjct: 61 TMTGD-TVIVMLGAGIERRDGVA----IPPRDALARIDKTAELYSACRRTAQRCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++ILV+
Sbjct: 116 GDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+ +
Sbjct: 176 SSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|289675765|ref|ZP_06496655.1| hypothetical protein PsyrpsF_21006 [Pseudomonas syringae pv.
syringae FF5]
Length = 256
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + L+ P
Sbjct: 16 ILFVLLILGWWLHRTRPRLAATFFAVGLGGLWLMSLPVAVEFAARKLEQVPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ SGG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARLAKE-----SGLPILTSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA S+++++ K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSLQDDFAVAVRWQEGL-SRTTWENATMSAAILQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G + +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|153004625|ref|YP_001378950.1| hypothetical protein Anae109_1763 [Anaeromyxobacter sp. Fw109-5]
gi|152028198|gb|ABS25966.1| protein of unknown function DUF218 [Anaeromyxobacter sp. Fw109-5]
Length = 252
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 82/225 (36%), Gaps = 7/225 (3%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++ + + L + ++ +R + + + ++L
Sbjct: 31 RRARAAWTLGLAAAGVLVVFSLAPVANGLQRFVERGAER---TFRPGAVYDAAIVLSGQV 87
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + +E + R+ + L+++ + + + +E+ +
Sbjct: 88 DEAASRASGELELDA-AADRVVRGLELWRAGRVRRLLLSGGPPAAV--PGEPSEAERLRD 144
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV I ++ QS +T +NA S+ + ++++LV+SA H R+ F+ G
Sbjct: 145 ALVRWGVPAAAILVDPQSRNTRENAIASAHLAAEHGLRSLLLVTSAAHAPRALGCFRAVG 204
Query: 197 INTKASCSDYLNAYY-SIIPLSANFYLTELALKEYIGILIAYYRG 240
++ D S +P + + L+E G ++ G
Sbjct: 205 LSPDVLPVDRRTGPSGSWLPRAGALEQSTAVLRELAGRVVYRLAG 249
>gi|194443111|ref|YP_002040188.1| hypothetical protein SNSL254_A1023 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194401774|gb|ACF61996.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 258
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q I K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKIGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEAGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|167902941|ref|ZP_02490146.1| hypothetical protein BpseN_11835 [Burkholderia pseudomallei NCTC
13177]
Length = 240
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ L I G + L+ L + +P+ P
Sbjct: 2 ILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVA-LAQAGMQPVAHP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D +IV+LG G + P + +RI +T LY +C++ + CT+++SG
Sbjct: 61 TMTGD-TVIVMLGAGIERRDGVA----IPPRDALARIDKTAELYSACRRTAQRCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ +AE+ Y LL GV D+ E +S T++NA+F++ +++ ++ILV+
Sbjct: 116 GDPQVRSIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+ +
Sbjct: 176 SSYQMKRALLDFERFGFAPQPVYANRRDARPGWLPRAANLANAELALHEIVGVAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|237808220|ref|YP_002892660.1| hypothetical protein Tola_1459 [Tolumonas auensis DSM 9187]
gi|237500481|gb|ACQ93074.1| protein of unknown function DUF218 [Tolumonas auensis DSM 9187]
Length = 251
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 20/230 (8%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+S LL + L + L+ Y + + I++LG+G
Sbjct: 34 RWQKSGKLLVSVATLLLVTFSLRPVSVGLNRPLEQLYPPF----PEGQTVDFIIVLGHGH 89
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P++P + + + + +RI E +R+ + + M + G ++ + +Y
Sbjct: 90 VSDPSVP-LNSQLTEAASARIQEALRIKRLNPKAHMIFS-----GSIAGDPVSGAQMYAR 143
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+G+ R+D+ L + DT + S +I N LV+SA H+ R+ F+
Sbjct: 144 VAEANGISRNDMTLIENARDTEEEVALDSQLISNHP---TALVTSASHMPRAMSLFRDTA 200
Query: 197 INTKASCSDYLN-------AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
N + + Y+ Y +P +E+AL E+IG L R
Sbjct: 201 ANVIPAPAQYVGRLVQGDIPLYGYLPSGRYLMYSEMALHEWIGTLWNRIR 250
>gi|238913237|ref|ZP_04657074.1| hypothetical protein SentesTe_19229 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 258
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALVWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|189023362|ref|YP_001934130.1| hypothetical protein BAbS19_I00980 [Brucella abortus S19]
gi|254690416|ref|ZP_05153670.1| hypothetical protein Babob68_09644 [Brucella abortus bv. 6 str.
870]
gi|254694904|ref|ZP_05156732.1| hypothetical protein Babob3T_09632 [Brucella abortus bv. 3 str.
Tulya]
gi|254731447|ref|ZP_05190025.1| hypothetical protein Babob42_09674 [Brucella abortus bv. 4 str.
292]
gi|260546384|ref|ZP_05822124.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755963|ref|ZP_05868311.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759187|ref|ZP_05871535.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760911|ref|ZP_05873254.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884984|ref|ZP_05896598.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215238|ref|ZP_05929519.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|189018934|gb|ACD71656.1| hypothetical protein BAbS19_I00980 [Brucella abortus S19]
gi|260096491|gb|EEW80367.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669505|gb|EEX56445.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671343|gb|EEX58164.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676071|gb|EEX62892.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874512|gb|EEX81581.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916845|gb|EEX83706.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 263
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP S IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSDGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|197265841|ref|ZP_03165915.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197244096|gb|EDY26716.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 258
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F C L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVFISVC-WLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|254430947|ref|ZP_05044650.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197625400|gb|EDY37959.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 265
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 86/219 (39%), Gaps = 18/219 (8%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
L+ L+ L P + +V+LG G P P R ++
Sbjct: 49 CAMPFTSRQLIWGLEER--STALEPASLPAADAVVVLGGGLR--PAQPPRRGVEVGEAGD 104
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ +RL + K ++ + K E+ + +E G+ + I L ++
Sbjct: 105 RLLTGVRLLRQGKAPTLVTSGGRVHFTAGKPPPPEAEWARDLAVELGIAPERILLAREAR 164
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-QHFGINTKASCSDYLNAY---- 210
T + A+ +M + ++LV+SA H+ R+ F + G+ A +D+
Sbjct: 165 TTAEEARDLGAMGRTRGWSRVLLVTSASHMPRALATFQRRSGLEVVAVPTDFQLPQRASY 224
Query: 211 ---------YSIIPLSANFYLTELALKEYIGILIAYYRG 240
S+ P + YL+ + LKE++G+L+ RG
Sbjct: 225 GAPTLGSALLSVAPDAEALYLSTVMLKEHLGLLVYRLRG 263
>gi|229020045|ref|ZP_04176829.1| hypothetical protein bcere0030_45390 [Bacillus cereus AH1273]
gi|229026276|ref|ZP_04182635.1| hypothetical protein bcere0029_45540 [Bacillus cereus AH1272]
gi|228734992|gb|EEL85628.1| hypothetical protein bcere0029_45540 [Bacillus cereus AH1272]
gi|228741267|gb|EEL91481.1| hypothetical protein bcere0030_45390 [Bacillus cereus AH1273]
Length = 344
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 107 ILFLMLLPIINPASLFSSHFQPIFAGIFLISVYFFIH---LSNFLTAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKKIMDSLKPEGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|76811194|ref|YP_333307.1| hypothetical protein BURPS1710b_1908 [Burkholderia pseudomallei
1710b]
gi|126441655|ref|YP_001058770.1| hypothetical protein BURPS668_1731 [Burkholderia pseudomallei 668]
gi|167738833|ref|ZP_02411607.1| hypothetical protein Bpse14_12248 [Burkholderia pseudomallei 14]
gi|167911178|ref|ZP_02498269.1| hypothetical protein Bpse112_11843 [Burkholderia pseudomallei 112]
gi|167919203|ref|ZP_02506294.1| hypothetical protein BpseBC_11665 [Burkholderia pseudomallei
BCC215]
gi|217423472|ref|ZP_03454973.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|254259791|ref|ZP_04950845.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|76580647|gb|ABA50122.1| conserved hypothetical protein [Burkholderia pseudomallei 1710b]
gi|126221148|gb|ABN84654.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
gi|217393330|gb|EEC33351.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|254218480|gb|EET07864.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 240
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 122/243 (50%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ L I G + L+ L + +P+ P
Sbjct: 2 ILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVA-LAQAGMQPVAHP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D +IV+LG G + P + +RI +T LY +C++ ++ CT+++SG
Sbjct: 61 TMTGD-TVIVMLGAGIERRDGVA----IPPRDALARIDKTAELYSACRRTALRCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++ILV+
Sbjct: 116 GDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+ +
Sbjct: 176 SSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|331656991|ref|ZP_08357953.1| putative KicA protein [Escherichia coli TA206]
gi|331055239|gb|EGI27248.1| putative KicA protein [Escherichia coli TA206]
Length = 270
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 38 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 92
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 93 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 147
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV + I DT + A I +LV+SA HL R+
Sbjct: 148 STAEVGARVAQSLGVPCEQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 204
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 205 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 262
>gi|291532233|emb|CBL05346.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 194
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+L+ L+ +Y P P + ++I++LG G T +R+ +RL
Sbjct: 1 MLIGRLEDAYDPPKHLP----NADVIIVLGGGATGDTPDVTGTGTLCSIPANRLLTAVRL 56
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Q + II+SGG + E+ + L E GV D I LE +SL+T QNA++
Sbjct: 57 -----QKKLGIPIIVSGGQIYEDSGREADIARRILKELGVSEDMILLENRSLNTTQNAEY 111
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII------PLS 217
S++++K+ + K +LV+SA+H++R+ + F G++ DY+ + P S
Sbjct: 112 STNILKSRKYKQPLLVTSAFHMERAVVNFNKLGVDVIPYPCDYMVNKEKVFHYNRLAPSS 171
Query: 218 ANFYLTELALKEYIGILIAYY 238
T + L+E + + Y
Sbjct: 172 QALEFTAIYLQENLRTFVTKY 192
>gi|62289087|ref|YP_220880.1| hypothetical protein BruAb1_0103 [Brucella abortus bv. 1 str.
9-941]
gi|82699025|ref|YP_413599.1| hypothetical protein BAB1_0103 [Brucella melitensis biovar Abortus
2308]
gi|237814579|ref|ZP_04593577.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254696534|ref|ZP_05158362.1| hypothetical protein Babob28_02155 [Brucella abortus bv. 2 str.
86/8/59]
gi|256258668|ref|ZP_05464204.1| hypothetical protein Babob9C_15246 [Brucella abortus bv. 9 str.
C68]
gi|297247504|ref|ZP_06931222.1| hypothetical protein BAYG_00411 [Brucella abortus bv. 5 str. B3196]
gi|62195219|gb|AAX73519.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615126|emb|CAJ10059.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|237789416|gb|EEP63626.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|297174673|gb|EFH34020.1| hypothetical protein BAYG_00411 [Brucella abortus bv. 5 str. B3196]
Length = 272
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP S IF R Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSDGSIFAAARFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|229087343|ref|ZP_04219484.1| hypothetical protein bcere0022_39130 [Bacillus cereus Rock3-44]
gi|228695980|gb|EEL48824.1| hypothetical protein bcere0022_39130 [Bacillus cereus Rock3-44]
Length = 347
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL+ I L+V + IF ++++ F I T L + + + RP
Sbjct: 112 MLLAMISLVVDPTRFFSPHFQPIFAGVSLIMIYFFFH---ISTFLTAYFLYQFNRP---- 164
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 165 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVTTPPTIIFSG 214
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV- 179
G L E+ +E G+ + E +S++T+QN FS ++ +++ K +
Sbjct: 215 GQGPDEKLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMLFSKKIMDSLKDKYRSIFT 274
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 275 TNNFHLFRAGLYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYIAIVV 319
>gi|260768178|ref|ZP_05877112.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio furnissii CIP 102972]
gi|260616208|gb|EEX41393.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio furnissii CIP 102972]
gi|315179879|gb|ADT86793.1| hypothetical protein vfu_A01625 [Vibrio furnissii NCTC 11218]
Length = 269
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 94/244 (38%), Gaps = 19/244 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L I + + + LL L+ Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLFGIFLISFQPVSSRLLMPLERQYSAFLPV-- 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG + IP E S + R+ E +R+ + + + G
Sbjct: 76 -DGTIDYVMVLGNGHVVDDQIP-PTSELSRAALMRLAEGIRVMRMYPGSKLILS-----G 128
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + + L GV + DI L + DT++ A+ +++ ++ + LV+S
Sbjct: 129 YAGGSEFSHARMLARVALALGVAKSDIILLETAKDTWEEARQAAAFVQQRRLV---LVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H++R+ F G+ + ++YL + P + TE E +G+L
Sbjct: 186 ASHMQRALNEFHSAGLQPIPAPTNYLAQASISQPWDKYTPKALYLEQTEHYWYESMGMLW 245
Query: 236 AYYR 239
R
Sbjct: 246 QSLR 249
>gi|323499476|ref|ZP_08104447.1| hypothetical protein VISI1226_09254 [Vibrio sinaloensis DSM 21326]
gi|323315463|gb|EGA68503.1| hypothetical protein VISI1226_09254 [Vibrio sinaloensis DSM 21326]
Length = 267
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 90/222 (40%), Gaps = 18/222 (8%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
F + + + + + T LL ++ Y + + +++LG+G + IP
Sbjct: 40 FIVLFSFIGIFLVAFQPVSTRLLMPIERQYSAFFPV---DESIDYVMVLGSGHVVDDEIP 96
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
E S R+ E +R+ + + + G ++ + + L GV
Sbjct: 97 -PTSELSRTGLMRLAEGIRIMRIYPGSKLILS-----GYAGGSEISNARMMAKVALALGV 150
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ DI L + DT++ A+ +++ +K+ + +V+SA H++R+ F G+ +
Sbjct: 151 SKSDIVLLETAKDTWEEARQAAAFVKHRKLV---VVTSASHMQRALNEFHSAGLKPYPAP 207
Query: 204 SDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++YL A+ P + TE E +G + R
Sbjct: 208 TNYLAHDNVTQAWTKYTPRAVYLEQTERYWHETLGKIWQTLR 249
>gi|229158416|ref|ZP_04286478.1| hypothetical protein bcere0010_45910 [Bacillus cereus ATCC 4342]
gi|228625023|gb|EEK81788.1| hypothetical protein bcere0010_45910 [Bacillus cereus ATCC 4342]
Length = 298
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 61 ILFFMLLPIINPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 113
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 114 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 163
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ K I
Sbjct: 164 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKDIMDSLKPDGKYRSI 223
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 224 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 270
>gi|229169539|ref|ZP_04297243.1| hypothetical protein bcere0007_44860 [Bacillus cereus AH621]
gi|228613929|gb|EEK71050.1| hypothetical protein bcere0007_44860 [Bacillus cereus AH621]
Length = 277
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 40 ILFLIMLSIINPASLFSAHFQFIFAAISLITMYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQSAVNTPPTIIFSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 143 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYKSI 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 203 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 249
>gi|193070748|ref|ZP_03051683.1| conserved hypothetical protein [Escherichia coli E110019]
gi|192955941|gb|EDV86409.1| conserved hypothetical protein [Escherichia coli E110019]
Length = 259
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV + I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPHEQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP A ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPAWLMHSDRVGYETLGRIWQWLKG 251
>gi|126173714|ref|YP_001049863.1| hypothetical protein Sbal_1476 [Shewanella baltica OS155]
gi|125996919|gb|ABN60994.1| protein of unknown function DUF218 [Shewanella baltica OS155]
Length = 248
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 110/241 (45%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ L+ + + +SC L F+ + L++ L+ +Y ++
Sbjct: 16 MPIPFILLLLVISFLVWRRRSMAKYLVSCAFFLLLFLSSQLGVNTLVRQLESAYP---IN 72
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+++LG+ + I A++ S + +R+ E +R ++ C +I+S
Sbjct: 73 STPITGACFVMVLGSAHSDIQGATAVQ-SLSAVALARLSEGVRQLNLGQE----CKLIVS 127
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + ++ + + N +E GV++ I + DT + AQ+ + + LV
Sbjct: 128 GWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIEEAQYLQWELGE---EPFRLV 184
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+SA H+ R+ F G++ +A+ +D++ + + N ++ A+ EYIG L +
Sbjct: 185 TSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRLWLWL 244
Query: 239 R 239
+
Sbjct: 245 K 245
>gi|300312046|ref|YP_003776138.1| hypothetical protein Hsero_2734 [Herbaspirillum seropedicae SmR1]
gi|300074831|gb|ADJ64230.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 263
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 44/244 (18%), Positives = 103/244 (42%), Gaps = 19/244 (7%)
Query: 10 VSYWHLLCQSIRKI-----FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
++ LL + I ++ + L + I + ++++ L+ Y P+LS + +
Sbjct: 21 IAAGFLLWRRPAPIGHIGQVMVALGVALLTLICMPAVADLMVRPLEQGY--PVLSAEAAR 78
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+L G+ R +P + + +R+ RL +++SGG+ +
Sbjct: 79 QAQAIVVLAAGSLDQAPEYEGRDQPDYVALARLRYAARLQHQ-----TGLPVLVSGGNAR 133
Query: 125 KHGL--AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +++ L E +E S +T +NA S+++++ + ++LV+ A
Sbjct: 134 EETPEQNKALAMAEALREDFRTPVR-WIEGGSENTEENALRSAALLRADGVQRVLLVTDA 192
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYS----IIPLSANFYLTELALKEYIGILIAYY 238
H+ R+ L F G+ A+ + + + ++P + + A E++G+
Sbjct: 193 MHMPRAMLAFAQAGLVPTAAPTAFFSLPRWRWPALLPSAEGLRRSWYASYEWLGLGWYRL 252
Query: 239 RGNR 242
R +
Sbjct: 253 RAGQ 256
>gi|163857424|ref|YP_001631722.1| hypothetical protein Bpet3112 [Bordetella petrii DSM 12804]
gi|163261152|emb|CAP43454.1| conserved hypothetical protein [Bordetella petrii]
Length = 252
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 82/231 (35%), Gaps = 14/231 (6%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + L L+ Y P L + IV+LG
Sbjct: 28 FRLRRTGAALAAFGLAWVLAWSLPATSLWLGGALESRY--PHLPVAELPTADAIVVLGGN 85
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T + + R+ ++LY++ + + + GD ++E+
Sbjct: 86 TANGRANWFLPYDKETAVV-RVDTAIKLYQAHRAPKVVLSGGALEGD-----VSEARGMA 139
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ + GV D + LE S T++NA + +K I+LV+SA H+ R+ F
Sbjct: 140 FLMKQQGVPEDALLLENSSRTTYENAMLTEEELKEHGFGKILLVTSALHMPRAMAAFSKQ 199
Query: 196 GINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ + + + +P + +KEY G+L+ + RG
Sbjct: 200 GVAAIPASTPPQIVLPPDGSVSPWLPHMRTLDASRSIIKEYAGLLVYWLRG 250
>gi|196032709|ref|ZP_03100122.1| conserved domain protein [Bacillus cereus W]
gi|195994138|gb|EDX58093.1| conserved domain protein [Bacillus cereus W]
Length = 291
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 54 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 106
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 107 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 156
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 157 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 216
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 217 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 263
>gi|238927939|ref|ZP_04659699.1| protein of hypothetical function DUF218 [Selenomonas flueggei ATCC
43531]
gi|238884272|gb|EEQ47910.1| protein of hypothetical function DUF218 [Selenomonas flueggei ATCC
43531]
Length = 253
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L+ + L V W QS R + + + G + L+ L+ +Y P +
Sbjct: 20 VLAMLGLAVYLWKRRHQS-RAAMLLCALAAMLYLLSIGAVSDRLMGELERTYPVPEV--- 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
G++I++LG G + SR+ RL+ H I++SGG
Sbjct: 76 --PQGDVIIMLGGGAIADVQDVDGMGMLAQSPSSRLLAAYRLH-----LRTHLPILLSGG 128
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L GV + I++ET+SL T QNA +++ +++ + ILV+S
Sbjct: 129 QVFSDTGSEAEIARRVLRSLGVPDEMIRVETRSLTTGQNAHYTAEILRREGLMHPILVTS 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTELALKEYIGILI 235
A+HL R+ L F+ GI +D+L + P + + L+E + I +
Sbjct: 189 AFHLPRAVLNFEKQGITVTPYPTDFLVSGDSQLYLLKFAPNAGALLTNTVYLQEKLRIAV 248
Query: 236 AYY 238
Y
Sbjct: 249 TRY 251
>gi|332701660|ref|ZP_08421748.1| protein of unknown function DUF218 [Desulfovibrio africanus str.
Walvis Bay]
gi|332551809|gb|EGJ48853.1| protein of unknown function DUF218 [Desulfovibrio africanus str.
Walvis Bay]
Length = 263
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 82/232 (35%), Gaps = 16/232 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + R+ + LL + + L+ L+ + RP+ P + I++L
Sbjct: 30 WTRWSRWGRRCVGFALAGLLILAV--LPVGQALMSPLEERFPRPVEMP---AEVEGIIVL 84
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G ++ + E + R+ + L + + + G + L ES
Sbjct: 85 GGYQDLLVFENRGQPEL-TAAADRLVAFVELARRYPHAKLVVSG--GSGMLLRQDLKESD 141
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V L G + + E S T +NA S + Q +LV+SA H+ R+ F
Sbjct: 142 VTRAALACLGFDDSRVIYEEISRTTHENAMVS----RPSQDGLWLLVTSASHMPRAVGVF 197
Query: 193 QHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ DY + L A++E++G+++ G
Sbjct: 198 RAQDWRVLPYPVDYRTVAGMVWEFPFQTGQRLALVSAAMREWVGLVVYRLIG 249
>gi|310823295|ref|YP_003955653.1| hypothetical protein STAUR_6067 [Stigmatella aurantiaca DW4/3-1]
gi|309396367|gb|ADO73826.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 256
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 99/244 (40%), Gaps = 11/244 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFM-SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L+W L + LL + R + + + + L++ ++ +
Sbjct: 15 PLTWGVLFIVLGLLLRRKRRLAAGLQVLGLAVLYTFSIEPVAGGLMRWVE---SGAKETY 71
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + +++LG G T + R E + + RI L + + + +
Sbjct: 72 RPEVVYDAVIVLGGGLDPDATERSGRPEYNA-AVERILRGYELLREGRARHVLLSG--GS 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D + + E+ V +LL G+ + I +E S +T +NA S +I+ K ++L++
Sbjct: 129 LDTRPEAVIEATVLQRQLLAWGIAPERIVVEGHSRNTRENALDSKKLIEERGWKTLLLIT 188
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIA 236
SA HL R+ F G+ +D + S +P + + + AL+E G ++
Sbjct: 189 SAAHLPRAYGCFAAVGLRPDTLAADVRASDGKRPPSWLPRANHLSASTDALRELAGRVVY 248
Query: 237 YYRG 240
RG
Sbjct: 249 RLRG 252
>gi|16764350|ref|NP_459965.1| hypothetical protein STM0990 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161614771|ref|YP_001588736.1| hypothetical protein SPAB_02523 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167994940|ref|ZP_02576030.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168263514|ref|ZP_02685487.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168466584|ref|ZP_02700446.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|16419502|gb|AAL19924.1| putative KicA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|161364135|gb|ABX67903.1| hypothetical protein SPAB_02523 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195630934|gb|EDX49520.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|205327272|gb|EDZ14036.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205347829|gb|EDZ34460.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|261246206|emb|CBG24010.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992729|gb|ACY87614.1| hypothetical protein STM14_1120 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157533|emb|CBW17023.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911976|dbj|BAJ35950.1| hypothetical protein STMDT12_C10070 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223313|gb|EFX48382.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323129255|gb|ADX16685.1| hypothetical protein STM474_0976 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332987881|gb|AEF06864.1| hypothetical protein STMUK_0956 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 258
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|56413961|ref|YP_151036.1| hypothetical protein SPA1808 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362884|ref|YP_002142521.1| hypothetical protein SSPA1681 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128218|gb|AAV77724.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094361|emb|CAR59873.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 258
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALVWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQQVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVSARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|261324222|ref|ZP_05963419.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261300202|gb|EEY03699.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 263
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP Y IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFFYGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|256060248|ref|ZP_05450424.1| hypothetical protein Bneo5_07795 [Brucella neotomae 5K33]
Length = 272
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP Y IF R Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFFYGSIFAAARFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|168233410|ref|ZP_02658468.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237094|ref|ZP_02662152.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168243758|ref|ZP_02668690.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194447573|ref|YP_002044982.1| hypothetical protein SeHA_C1088 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194472169|ref|ZP_03078153.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737227|ref|YP_002114042.1| hypothetical protein SeSA_A1104 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194405877|gb|ACF66096.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194458533|gb|EDX47372.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194712729|gb|ACF91950.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289831|gb|EDY29192.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|205332431|gb|EDZ19195.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337158|gb|EDZ23922.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 258
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|167553009|ref|ZP_02346759.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205322470|gb|EDZ10309.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 258
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|74316470|ref|YP_314210.1| transmembrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74055965|gb|AAZ96405.1| probable transmembrane protein [Thiobacillus denitrificans ATCC
25259]
Length = 251
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 97/245 (39%), Gaps = 16/245 (6%)
Query: 2 LLSWIFLIVSYWHLLCQ-SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
LS + ++ + + + + + + + +LLK L+ S
Sbjct: 17 PLSLVIVLGAGIAIRRRNPRLAMSLILVSTAALYALSTPWVGGLLLKSLEISVPVDPARL 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+L G + + S R+ +RL+++ ++++G
Sbjct: 77 Q----ADAIVVLSGGRRMASREYGG-DTLNGISLERLRYAVRLHRA-----TGLPLLVTG 126
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+P LAE + L + +E +L T+ NA+ S+ ++K I LV+
Sbjct: 127 GNPGGGTLAEGQILAQVLRDDYGIEPR-WVEDAALTTWDNARLSAPLLKKSGVHRIALVT 185
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIA 236
A+HL+R+ F+ + + + + ++P A + AL E++GIL
Sbjct: 186 HAWHLRRAVPLFEAQELEVIPAGIQFASTDLDRILDLLPTPAGLRDSSFALHEWLGILWY 245
Query: 237 YYRGN 241
R N
Sbjct: 246 KLRSN 250
>gi|238749759|ref|ZP_04611264.1| hypothetical protein yrohd0001_30790 [Yersinia rohdei ATCC 43380]
gi|238712414|gb|EEQ04627.1| hypothetical protein yrohd0001_30790 [Yersinia rohdei ATCC 43380]
Length = 255
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 95/250 (38%), Gaps = 21/250 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ L I + ++ L +K + L+ I + LL L+ Y
Sbjct: 16 LPLVLIIMALALILLWFTRWQKSGKTLFALSWLILLLISLQPVADRLLLPLEKQYA---- 71
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ Q + IV+LG G T P A S R+ E +RLY++ ++
Sbjct: 72 TYQGNDPVDYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGIRLYRAHPNAK-----LV 125
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G H + + GV +DI Q DT + A ++++ + L
Sbjct: 126 FTGGAAPHNQSSAKTAAQVAESLGVPAEDIIALDQPKDTIEEAAAVANLVGDKPFL---L 182
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIG 232
V+SA HL R+ +F G+N + ++ L ++ IP + +E + E +G
Sbjct: 183 VTSANHLPRAMNFFVAKGLNPIPAPANQLAITTPLQSWERAIPAAVYLGHSERSWYETLG 242
Query: 233 ILIAYYRGNR 242
++ N+
Sbjct: 243 LMWQKLTANK 252
>gi|149914159|ref|ZP_01902690.1| hypothetical protein RAZWK3B_19201 [Roseobacter sp. AzwK-3b]
gi|149811678|gb|EDM71511.1| hypothetical protein RAZWK3B_19201 [Roseobacter sp. AzwK-3b]
Length = 260
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 87/242 (35%), Gaps = 11/242 (4%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
I VS + + I+ + L S + I L+ ++ Y P
Sbjct: 22 IVIMAGVSVFAFWRRKIKLAVMTMLGLFLALSLMAVMPIGQALVARIEAQYAPPSSLDSL 81
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
IV+LG G + + + R+ T+ L + +
Sbjct: 82 AG----IVVLGGGENLPASSRWDTVVLG-DGAERLTATLELARRFPDAKIVYAGGSGRVR 136
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D L E+ + + LL G+ + + + S +T +NA + + G+ +LV+S
Sbjct: 137 DAFGAQLTEADIAQHFLLNMGLAPERLLTDPTSRNTAENAARAMELATPEVGQTWVLVTS 196
Query: 182 AYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSI---IPLSANFYLTELALKEYIGILIAY 237
A+H+ R+ F+ G DY ++ L+ N + ++A++E +G
Sbjct: 197 AFHMPRAIRSFEAAGWSELVPYPVDYRTGTFTNGLGWDLTGNLAMLQIAIREAVGSFAYR 256
Query: 238 YR 239
Sbjct: 257 LT 258
>gi|78484758|ref|YP_390683.1| hypothetical protein Tcr_0413 [Thiomicrospira crunogena XCL-2]
gi|78363044|gb|ABB41009.1| Conserved hypothetical protein; predicted membrane protein with
DUF218 [Thiomicrospira crunogena XCL-2]
Length = 272
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 94/237 (39%), Gaps = 16/237 (6%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
S + L + F+ L + I +L++ L+ ++ P P K + I+
Sbjct: 30 SVFLLFNRIQTAKTFLLPASLAGFIVLAFPIGDLLIQPLEQRFKAPDTLP---KHIDGII 86
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ---KHG 127
+LG G + ++ R E R L + +I +GG ++
Sbjct: 87 VLGGGEDLKRSLSWGRPELG-IGGDRYIGAKELATHYPK----APVIFTGGSGSMQLQNT 141
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E + L G+ + +E+ S +T++N +F+ +++ +LV+SA+H+ R
Sbjct: 142 QGEGSLARQLLTTLGITDKRLIIESLSRNTYENFKFTKALL-PDANGTYLLVTSAFHMPR 200
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSI----IPLSANFYLTELALKEYIGILIAYYRG 240
S + I+ DY + + + E A KE+IG+ + Y+ G
Sbjct: 201 SVGIANNQNIHVIPYPVDYRSNSEKLRQIDFDFFDHLKSLEPAWKEWIGLTVYYWTG 257
>gi|271500774|ref|YP_003333799.1| hypothetical protein Dd586_2243 [Dickeya dadantii Ech586]
gi|270344329|gb|ACZ77094.1| protein of unknown function DUF218 [Dickeya dadantii Ech586]
Length = 259
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 18/240 (7%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ W Q +I ++ L+ + + LL L+ Y
Sbjct: 25 IALALLWFSRWQKTARI-MLTGGWLVLLLLSLQPVADRLLLPLESRYPTWT---PDFPKV 80
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
N IV+LG G T P P S +R+ E +RL+++ +I +G Q +
Sbjct: 81 NYIVVLGGGYTFNPDWP-PSANLINNSLARVTEGIRLWRANP----GAKLIFTGAAAQGN 135
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI L ++ DT + A + ++I LV+SA HL
Sbjct: 136 PVTSASTAARVAESLGVPAQDILLVDKARDTEEEAAGTEALIGKQPFL---LVTSANHLP 192
Query: 187 RSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +FQ G++ + ++ LN + + P + +E A E +G++ +G
Sbjct: 193 RAIRFFQARGLHPIPAPANQLAITSPLNPWERVFPSALYLSHSERAWYEGLGLIWQQMKG 252
>gi|114321439|ref|YP_743122.1| hypothetical protein Mlg_2290 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227833|gb|ABI57632.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 252
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
W + LL L+ + P+ + + IV+LG+G + +P + + + R+
Sbjct: 53 WAPVADRLLAPLEQRHP-PVHDARDHPEAQAIVVLGSGYSPHLALP-VTAQLNDSGLVRL 110
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E +RL++ +I+S G + + + + GV D + T+ DT
Sbjct: 111 NEGIRLHRQRPA----LPLIVS-GGARPDQAPIAEGFRRAAIALGVADDRLLPLTEPRDT 165
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYY 211
Q A + ++ G ++LV+SA H+ R+Q +F G+N + + +
Sbjct: 166 AQEAYATREVLGE--GATVLLVTSASHIHRAQAHFHRAGLNPIPAPTRHKAGHVRPATPG 223
Query: 212 SIIPLSANFYLTELALKEYIGILIAYY 238
IP + + +E AL EY+G+L A
Sbjct: 224 YWIPSATHLRKSERALYEYMGLLAAGL 250
>gi|308048831|ref|YP_003912397.1| hypothetical protein Fbal_1114 [Ferrimonas balearica DSM 9799]
gi|307631021|gb|ADN75323.1| protein of unknown function DUF218 [Ferrimonas balearica DSM 9799]
Length = 243
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 93/240 (38%), Gaps = 14/240 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L+ ++ + + + + + I T L L+ Y S
Sbjct: 16 IPLACALILAGLLLRRRAPKLALTLLLAGPVYLLALSFSPISTALANSLESHY----TSW 71
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + +++LG+ + P A + S + R+ E +R++++ ++ +
Sbjct: 72 QPGAEVAYVLVLGSSHSSHPDRAA-TAQLSATALGRLMEGIRVWRANPDATLVLSGFAGS 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ + +E GV I Q+ DT Q A+ ++ ++ +LV+
Sbjct: 131 -----DPTPHAELMKCAAIEQGVPESHIHTFPQARDTEQEARLTAPLVGA---APAVLVT 182
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-IIPLSANFYLTELALKEYIGILIAYYR 239
SA H+ R+ +Q G++ + +D++ + N + ++ + EY+G L +
Sbjct: 183 SASHMDRALSLYQAQGLSVTPAATDFIAQPTRAWYFSARNLWTSQRVIHEYLGQLWLAIK 242
>gi|315266865|gb|ADT93718.1| protein of unknown function DUF218 [Shewanella baltica OS678]
Length = 233
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 99/225 (44%), Gaps = 12/225 (5%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +SC + F+ + L++ L+ +Y ++ +++LG+
Sbjct: 17 WRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYP---INSTPITGACFVMVLGSA 73
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I A++ S + +R+ E +R ++ C +I+SG + + + +
Sbjct: 74 HSDIQGATAVQ-SLSAVALARLSEGVRQLNLGQE----CKLIVSGWGGELTQFSHAEMMA 128
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+E GV++ I + DT + AQ+ + + LV+SA H+ R+ F
Sbjct: 129 KAAVELGVDKRRIIQFPLARDTIEEAQYLQWELGE---EPFRLVTSATHMPRAMAIFTAK 185
Query: 196 GINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G++ +A+ +D++ + + N ++ A+ EYIG L + +
Sbjct: 186 GLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRLWLWLK 230
>gi|62179518|ref|YP_215935.1| hypothetical protein SC0948 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|198245262|ref|YP_002214914.1| hypothetical protein SeD_A1055 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389922|ref|ZP_03216533.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205352197|ref|YP_002225998.1| hypothetical protein SG0932 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856381|ref|YP_002243032.1| hypothetical protein SEN0894 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224582800|ref|YP_002636598.1| hypothetical protein SPC_0991 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|62127151|gb|AAX64854.1| putative KicA protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|197939778|gb|ACH77111.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602367|gb|EDZ00913.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205271978|emb|CAR36822.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708184|emb|CAR32477.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467327|gb|ACN45157.1| hypothetical protein SPC_0991 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322713985|gb|EFZ05556.1| Uncharacterized protein ycbC [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|326622667|gb|EGE29012.1| hypothetical protein SD3246_1028 [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326627241|gb|EGE33584.1| hypothetical protein SG9_0953 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 258
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GARLIFTGGIAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|16759859|ref|NP_455476.1| hypothetical protein STY0992 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142368|ref|NP_805710.1| hypothetical protein t1944 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052381|ref|ZP_03345259.1| hypothetical protein Salmoneentericaenterica_05289 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424605|ref|ZP_03357388.1| hypothetical protein SentesTyphi_02341 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581562|ref|ZP_03363388.1| hypothetical protein SentesTyph_10282 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213613211|ref|ZP_03371037.1| hypothetical protein SentesTyp_12289 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213650532|ref|ZP_03380585.1| hypothetical protein SentesTy_26823 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857895|ref|ZP_03384866.1| hypothetical protein SentesT_22570 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|25347649|pir||AD0615 probable membrane protein STY0992 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502152|emb|CAD05390.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137998|gb|AAO69559.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 258
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|330953011|gb|EGH53271.1| hypothetical protein PSYCIT7_16874 [Pseudomonas syringae Cit 7]
Length = 256
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + + + + + + L+ P
Sbjct: 16 ILFVLLILGWWLRRSRPRLATVSFAVGLGGLWLMSLPVAVEFAARKLEQIPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ SGG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GADTPTGLGLERLRLAARLAKE-----SGLPILTSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA S+++++ K ++LV+
Sbjct: 130 LHFDQPPSEAAIMAQSLQDDFAVTVRWQEGL-SRTTWENATMSAAVLQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G ++ YL + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVSAPVGYLGVDNARPFGGWLPESRVFTQSGMLLNEAAGLLVY 248
>gi|33240920|ref|NP_875862.1| hypothetical protein Pro1471 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238449|gb|AAQ00515.1| Uncharacterized conserved protein with signal peptide
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 241
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 87/235 (37%), Gaps = 17/235 (7%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L + + + G++ +L K ++ +QR + + IV+L
Sbjct: 11 LFLHLNKKYSSSTLSIFIFLWTFSIGLVSQMLWKFVEHPWQR--IDESHAPTADAIVVLS 68
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+G P I + R ++L+K K + T S E +
Sbjct: 69 SG--GRSLAPGISNIIEWNDPDRFLAGVKLFKEKKAPKLFFTGGASPYRKALK--TEGDL 124
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVSSAYHLKRSQLYF 192
Y + + G+ + I + +T + A + I+LV+SA+H++R++ F
Sbjct: 125 YKEEAISLGIPKKAISTTGRVFNTAEEAFQIRRNIKDKGSPSKILLVTSAFHMQRAKRQF 184
Query: 193 QHFGINTKASCSDYLN----------AYYSIIPLSANFYLTELALKEYIGILIAY 237
+ G + D+ Y+ IP S + +++ AL+E +G +
Sbjct: 185 ERQGFIVQPFPVDFKTERKFRKTYWKNPYNWIPNSESLFMSSKALRELLGRAVYR 239
>gi|306842605|ref|ZP_07475254.1| protein of unknown function DUF218 [Brucella sp. BO2]
gi|306287250|gb|EFM58738.1| protein of unknown function DUF218 [Brucella sp. BO2]
Length = 263
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 3/236 (1%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L++ + ++ + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITVLLVVGVFLWWGKWRKTGVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP- 63
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 -LEDNTVFVVFGLGTQTVNEQGHNTVEPLAFSYGSIFAAARFYHECQSSGISCTFITTGA 122
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 123 DVAGTGVSEAASAAAELEKAGVDSQAIIQDDKPRNAWTTARNVAATLRELKPARVVVLQP 182
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 183 APMMGRTLLYLAHFGIKPEPVATSYLTVNASTHFSTSLSFLAMDLALHEEIGAWRY 238
>gi|237798424|ref|ZP_04586885.1| hypothetical protein POR16_06246 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021276|gb|EGI01333.1| hypothetical protein POR16_06246 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 256
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI ++W + + + ++ + L+ + P P
Sbjct: 16 ILFLLLIAAWWLRRSRPRLAAACFIVGLGGLWLMSLPVVVEFSARQLERTTPLPRQQWPI 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GADTPTGLGLERLRLAARLAKE-----SGLPIMTAGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L E E QS T++NA ++ +++ + + ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSLQEDFGVTVR-WQEGQSRTTWENATMAARVLQPLGIRRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|148270249|ref|YP_001244709.1| hypothetical protein Tpet_1119 [Thermotoga petrophila RKU-1]
gi|281412552|ref|YP_003346631.1| protein of unknown function DUF218 [Thermotoga naphthophila RKU-10]
gi|147735793|gb|ABQ47133.1| protein of unknown function DUF218 [Thermotoga petrophila RKU-1]
gi|281373655|gb|ADA67217.1| protein of unknown function DUF218 [Thermotoga naphthophila RKU-10]
Length = 237
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 100/237 (42%), Gaps = 20/237 (8%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+F+++ + F ++ + + F + + + L L+ + P P
Sbjct: 16 LFILLLIVGSFFFKKARWFLLALAVTAYLFSSY-VGEFLFLWSLEKNLDVPATLPNDA-- 72
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+IV+LG G S + R+ +++Y+ K I+ G
Sbjct: 73 --VIVVLGGGVERNTKAG---DNLSDATLRRLLTGVQIYQKTKMP------ILVTGGSLT 121
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E+++ + L+ GV + I +E +S +T++NA F+ + IILV+ + H+
Sbjct: 122 GLRPEAMIMKDYLVSLGVPEEKITVEDRSRNTYENAFFTRE---KIGDVPIILVTDSIHM 178
Query: 186 KRSQLYFQHFGINTKASCSDY---LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+R+ F+ F + + + + +P + +FYL A+ E+IG++ +R
Sbjct: 179 RRAVSTFKSFFQSVTPYPAGFYFGDPEFVDFLPNATSFYLNSRAIYEWIGLVWYNFR 235
>gi|158424456|ref|YP_001525748.1| hypothetical protein AZC_2832 [Azorhizobium caulinodans ORS 571]
gi|158331345|dbj|BAF88830.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 271
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 87/223 (39%), Gaps = 15/223 (6%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F G+ L+ L+ + + + + I++LG ++
Sbjct: 43 FAVLATAGLMGFGFSPAGNYLMSPLEERFPPFVG---DGRPVDGIIMLGGAEVPEVSVVR 99
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV- 143
+ + R+ L + Q ++ SGG + + +L + V
Sbjct: 100 GVTALN-DAAERVLAFAALARRYPQ----AKLVFSGGSGEYDESMPAAQDAVRLAFADVG 154
Query: 144 -ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ + E +S +T QNA + +I + G+ +LV+SA+H+ R+ F+ G A
Sbjct: 155 LDVTRVIYERRSRNTAQNAVETRKLITPVPGERWLLVTSAFHMPRAIGCFREVGFPVTAY 214
Query: 203 CSDYLNAYYSIIP-----LSANFYLTELALKEYIGILIAYYRG 240
DY + +++ +T++A++E++G+ Y G
Sbjct: 215 PVDYRTLGPGRLNGVFRRVASGLDITDIAVREWMGLGAYYASG 257
>gi|218553507|ref|YP_002386420.1| hypothetical protein ECIAI1_0961 [Escherichia coli IAI1]
gi|293433217|ref|ZP_06661645.1| hypothetical protein ECCG_01342 [Escherichia coli B088]
gi|300823660|ref|ZP_07103787.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|331667297|ref|ZP_08368162.1| putative KicA protein [Escherichia coli TA271]
gi|331676708|ref|ZP_08377404.1| putative KicA protein [Escherichia coli H591]
gi|218360275|emb|CAQ97825.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|291324036|gb|EFE63458.1| hypothetical protein ECCG_01342 [Escherichia coli B088]
gi|300523860|gb|EFK44929.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|331065653|gb|EGI37546.1| putative KicA protein [Escherichia coli TA271]
gi|331075397|gb|EGI46695.1| putative KicA protein [Escherichia coli H591]
Length = 259
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV + I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPHEQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|258404265|ref|YP_003197007.1| hypothetical protein Dret_0127 [Desulfohalobium retbaense DSM 5692]
gi|257796492|gb|ACV67429.1| protein of unknown function DUF218 [Desulfohalobium retbaense DSM
5692]
Length = 258
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 96/248 (38%), Gaps = 18/248 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR---KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
+ L++ L+ L + + + +P ++ L+ +
Sbjct: 15 LPLAFELLVAGLVILFGFRRWQRTGRWLVLAGTAVLLVSTTPAVPQWAMRTLEGRFPAID 74
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
++ D +V+LG G P +P + + + R+ E +R+ + ++ +
Sbjct: 75 MTAAKAADAQWVVVLGGGHASDPGLP-VSAKVGTSTMYRLVEGVRIVRQLPGATLLLS-- 131
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
G K ++ + + + G E + E AQ ++ + + + +
Sbjct: 132 ---GYAGKEAVSNARIKADLAKALGYEGPLVLEERP----RDTAQEAAMITERLGQAPFV 184
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIG 232
LV+SA H+ R+ FQ G + A+ + +L + P + + Y + A+ EY+G
Sbjct: 185 LVTSASHMPRAMALFQGQGSHPIAAPTGHLAPREALQAWDWFPNAQDAYCLQRAVYEYLG 244
Query: 233 ILIAYYRG 240
+ A+ RG
Sbjct: 245 LGWAWLRG 252
>gi|52140703|ref|YP_086126.1| membrane spanning protein [Bacillus cereus E33L]
gi|51974172|gb|AAU15722.1| conserved hypothetical protein; possible membrane spanning protein
[Bacillus cereus E33L]
Length = 345
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 108 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 211 GQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|306844381|ref|ZP_07476971.1| protein of unknown function DUF218 [Brucella sp. BO1]
gi|306275194|gb|EFM56944.1| protein of unknown function DUF218 [Brucella sp. BO1]
Length = 263
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 105/236 (44%), Gaps = 3/236 (1%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L++ + ++ + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITVLLVVGVFLWWGKWRKTGVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP- 63
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 -LEDNTVFVVFGLGTQTVNEQGHNIVEPLAFSYGSIFAAARFYHECQSSGISCTFITTGA 122
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ + ++++
Sbjct: 123 DVAGTGVSEAASAAAELEKAGVDSQAIIQDDKPRNAWTTARNVAATLRELKPERVVVLQP 182
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL + S +F +LAL E IG
Sbjct: 183 APMMGRTLLYLAHFGIKPEPVATSYLTVNASTHFSTSLSFLAMDLALHEEIGAWRY 238
>gi|209521954|ref|ZP_03270620.1| protein of unknown function DUF218 [Burkholderia sp. H160]
gi|209497609|gb|EDZ97798.1| protein of unknown function DUF218 [Burkholderia sp. H160]
Length = 212
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 5/209 (2%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ LF + G + LL QR + I+LLG GT + P
Sbjct: 2 IALFWLLAAGWLTAPLLDLA--QPQRQSAAAATFAPRTAIILLGGGTIYDDDN---VLVP 56
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
SRI + R Y +CK+ + C +I+SGG+PQ+H E+ Y LL V R DI
Sbjct: 57 PHDVLSRIEVSARNYAACKRTANICQVIVSGGNPQRHSATEADTYLPYLLRQQVARSDIV 116
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
LE S T++NA+ S+++ +ILV+SAYH+ R+ L FQ FG+ + S A
Sbjct: 117 LEKTSRTTYENARNVSAIVGQSHYDTLILVTSAYHMPRALLDFQCFGVEPQPQISSARRA 176
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYY 238
++P N E+AL E G+ +
Sbjct: 177 RLGVLPRFENLLAAEIALHELAGLAQFHL 205
>gi|108758987|ref|YP_633512.1| hypothetical protein MXAN_5362 [Myxococcus xanthus DK 1622]
gi|15076969|gb|AAK83000.1|AF285783_5 unknown [Myxococcus xanthus]
gi|108462867|gb|ABF88052.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 258
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 92/246 (37%), Gaps = 13/246 (5%)
Query: 2 LLSWIFLIVSYWH--LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
LSW L+ + ++ + L++ + R S
Sbjct: 15 PLSWALLLWLVAWGLRRRRERLSRVLSVLGGVVLYAFSIEPVAMGLMRAAEAGAVR---S 71
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
Q + +++LG T E + + R+ L + + +
Sbjct: 72 FQPGATYDAVIVLGGALDPAATERTGVPEYNA-AAERVLRGFELLHEGRARRVLLSG--G 128
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
DP+ + E+ V +L + G+ R+ I E +S +T +NA S+ +I+ K+++LV
Sbjct: 129 SLDPRPEAVVEADVLLRQLQQWGIPRERIVTEGRSRNTRENAVESARIIQERGWKSLLLV 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGIL 234
+SA H+ R+ F G+ D + S +P S L+ AL+E G
Sbjct: 189 TSAAHMPRAAGCFAAVGLRPDLLPVDSRASNTPLRRMSWLPRSGALNLSTDALRELAGRA 248
Query: 235 IAYYRG 240
+ RG
Sbjct: 249 VYRVRG 254
>gi|170288947|ref|YP_001739185.1| hypothetical protein TRQ2_1158 [Thermotoga sp. RQ2]
gi|170176450|gb|ACB09502.1| protein of unknown function DUF218 [Thermotoga sp. RQ2]
Length = 237
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 100/237 (42%), Gaps = 20/237 (8%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+F+++ + F ++ + + F + + + L L+ + P P
Sbjct: 16 LFILLLIVGSFFFKKARWFLLALAVTAYLFSSY-VGEFLFLWSLEKNLDVPATLPNDA-- 72
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+IV+LG G S + R+ +++Y+ K I+ G
Sbjct: 73 --VIVVLGGGVERNTKAG---DNLSDATLRRLLTGVQIYQKTKMP------ILVTGGSLT 121
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E+++ + L+ GV + I +E +S +T++NA F+ + IILV+ + H+
Sbjct: 122 GLRPEAMIMKDYLVSLGVPEEKITVEDRSRNTYENAFFTRE---KIGDVPIILVTDSIHM 178
Query: 186 KRSQLYFQHFGINTKASCSDY---LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+R+ F+ F + + + + +P + +FYL A+ E+IG++ +R
Sbjct: 179 RRAVFTFKSFFQSVTPYPAGFYFGDPEFVDFLPNATSFYLNSRAIYEWIGLVWYNFR 235
>gi|284007579|emb|CBA73135.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 268
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 17/243 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+S+I LI+ ++ +S + +S L +G I LL + + +
Sbjct: 22 VSFIGLILLWFTHWQKSGK--CLISFSWLALLLLGIQPIADKLLLSTEAPFNKRYELLHP 79
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K+ IV+LG G T P P S +R+ E +RLY +I G
Sbjct: 80 KQTIQYIVVLGGGFTYNPDWP-PSANLINNSLARVTEGIRLYLQHSGAK-----LIFTGG 133
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ++ + V L GV D+ T+ DT + A ++ LV+SA
Sbjct: 134 RGNNMISNAEVAAKVALSLGVPETDLITLTEPRDTEEEALEVEKIVGKQPFL---LVTSA 190
Query: 183 YHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R++ +F ++ + ++ L + I P + F +E A E+IG +
Sbjct: 191 NHMARAEHFFLARNMHPITAPANQLAITSPLQPWERIFPSAYYFSHSERAWYEFIGSVWQ 250
Query: 237 YYR 239
+
Sbjct: 251 AIK 253
>gi|42784000|ref|NP_981247.1| hypothetical protein BCE_4954 [Bacillus cereus ATCC 10987]
gi|42739930|gb|AAS43855.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 345
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 108 ILFFMLLPIISPASLFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ N I
Sbjct: 211 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYNSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|85058977|ref|YP_454679.1| hypothetical protein SG0999 [Sodalis glossinidius str. 'morsitans']
gi|84779497|dbj|BAE74274.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 275
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 18/236 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++ W ++ +S L+ + + LL L+ Y +
Sbjct: 27 LMLLWLNRGTKTARL-LLSAGWLVLLALSLQPVADRLLAPLEAHYPTWQPH---GETVKW 82
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P P S R+ E +R +++ T++ +G + + +
Sbjct: 83 IVVLGGGYTWNPDWP-PSANLINNSLPRVTEGIRQWRAHPS----ATMVFTGANAPGNLV 137
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + + GV I DT Q A + ++ +LV+SA HL R+
Sbjct: 138 SSAEAASRVAQSLGVPAAAIMTLDSPRDTHQEAASVARLVGQAPL---MLVTSANHLPRA 194
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+F G+ ++ L I+P +E E +G +
Sbjct: 195 MGFFTAAGLQPIPVPANQLAITSPLQPQEKILPSPLWLGHSERVWYETLGQVWQRL 250
>gi|254197234|ref|ZP_04903656.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|169653975|gb|EDS86668.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
Length = 240
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + L + ++ L I G + L+ L + +P+ P
Sbjct: 2 ILFNSFGLLFVVFLLCRKPRGAFAILAAGAALLWLIASGWLAAPLVA-LAQAGMQPVAHP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D +IV+LG G + P + +RI +T LY +C++ + CT+++SG
Sbjct: 61 TMTGD-TVIVMLGAGIERRDGVA----IPPRDALARIDKTAELYSACRRTAQRCTVVVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++ILV+
Sbjct: 116 GDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVT 175
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAY 237
S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+ +
Sbjct: 176 SSYQMKRALLDFEWFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFHVYR 235
Query: 238 YRG 240
G
Sbjct: 236 RLG 238
>gi|160874624|ref|YP_001553940.1| hypothetical protein Sbal195_1507 [Shewanella baltica OS195]
gi|160860146|gb|ABX48680.1| protein of unknown function DUF218 [Shewanella baltica OS195]
Length = 248
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 99/225 (44%), Gaps = 12/225 (5%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +SC + F+ + L++ L+ +Y ++ +++LG+
Sbjct: 32 WRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYP---INSTPITGACFVMVLGSA 88
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I A++ S + +R+ E +R ++ C +I+SG + + + +
Sbjct: 89 HSDIQGATAVQ-SLSAVALARLSEGVRQLNLGQE----CKLIVSGWGGELTQFSHAEMMA 143
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+E GV++ I + DT + AQ+ + + LV+SA H+ R+ F
Sbjct: 144 KAAVELGVDKRRIIQFPLARDTIEEAQYLQWELGE---EPFRLVTSATHMPRAMAIFTAK 200
Query: 196 GINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G++ +A+ +D++ + + N ++ A+ EYIG L + +
Sbjct: 201 GLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRLWLWLK 245
>gi|292670312|ref|ZP_06603738.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648043|gb|EFF66015.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 252
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 17/244 (6%)
Query: 2 LLSWIFLIVSYW-HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + L + W C + + + G L+ L+ +Y+ P+
Sbjct: 17 IFILVMLAAAAWLWKKCGARLAAGVLCGIACALYLLSTGAAADSLMGSLERTYEVPV--- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
G+IIV+LG G + SR+ +RL++ H I++SG
Sbjct: 74 --HPQGDIIVMLGGGAIADVRDVDGTGMLAQSPSSRLLAVLRLHRRY-----HLPILLSG 126
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+ + L GV + I +ET S T QNA++S+ +++ + ILV+
Sbjct: 127 GQVFSDTGSEAEIARRVLRSLGVPSEMIYVETHSRTTGQNARYSAEILRREGFAHPILVT 186
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTELALKEYIGIL 234
SA+HL R+ L F+ G+ +D+ + P ++ + L+E +
Sbjct: 187 SAFHLPRAVLNFEKEGVAVTPYPTDFWVSGNPQLYALKFAPNASALLTNTVFLQEKLRTF 246
Query: 235 IAYY 238
I Y
Sbjct: 247 ITRY 250
>gi|326942590|gb|AEA18486.1| hypothetical protein CT43_CH4827 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 234
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ I++ L+ + IF + + FI + L + + + RP ++
Sbjct: 1 MLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP------RR 51
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+G P + SRI + + Y + TII SGG
Sbjct: 52 NQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSGGQGP 103
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSS 181
GL E+ + +E G+ + E +S++T+QN FS ++ +++ + ++
Sbjct: 104 DEGLPEAEAMQSYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSIFTTN 163
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 164 NFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 206
>gi|161503883|ref|YP_001570995.1| hypothetical protein SARI_01972 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865230|gb|ABX21853.1| hypothetical protein SARI_01972 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 258
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 19/236 (8%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
W Q K+F +S L + + LL+ ++ SY Q + IV
Sbjct: 29 LIWFSRFQKTGKVF-ISVGWLALLLLSLQPVADRLLRPIENSYPTW----QGPQKVEYIV 83
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G T P A S R+ E +RL+++ +I +GG + + ++
Sbjct: 84 VLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GAKLIFTGGVAKTNTVST 138
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ V GV R DI + DT + A I +LV+SA HL R+ +
Sbjct: 139 AEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DTPFLLVTSASHLPRAMI 195
Query: 191 YFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+FQH G+N + ++ LN + IP ++ A E +G + + +G
Sbjct: 196 FFQHAGLNPLPAPANQLAIDSPLNPWEQAIPSPVWLMHSDRASYEALGRIWQWLKG 251
>gi|237738277|ref|ZP_04568758.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
gi|229420157|gb|EEO35204.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
Length = 252
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 102/246 (41%), Gaps = 17/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + I L V +L + + + + + L L+ SY +S
Sbjct: 16 LPIIIILLFVGVGNLFKKRKKSGLVLILISIFLYLASSEVFIDKKLYDLENSYSI--ISE 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + G + VLLG G I P RI +T I ISG
Sbjct: 74 KNLEKGEVYVLLGGGIITTTGEGNI---PGIMPAVRIMKTAE-----YYKKYPKKIYISG 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P ++ +ES VY +L+ GV +DI +E S +T +NA F ++ KNIIL++
Sbjct: 126 GSPLQNQESESSVYARELISLGVNSEDIIVEENSKNTNENALFIKQELEKNGIKNIILIT 185
Query: 181 SAYHLKRSQLYFQHF--GINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
SA+H+KRS F+ G+ + ++L + ++ IP N +L E IG
Sbjct: 186 SAFHMKRSMFIFEKNLDGVEIVPAPCNFLASKEKENFFYYIPKYYNLLKFQLWFWETIGN 245
Query: 234 LIAYYR 239
+ R
Sbjct: 246 IYYKIR 251
>gi|218557825|ref|YP_002390738.1| hypothetical protein ECS88_0948 [Escherichia coli S88]
gi|218364594|emb|CAR02280.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
Length = 259
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V V R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLDVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|212709800|ref|ZP_03317928.1| hypothetical protein PROVALCAL_00848 [Providencia alcalifaciens DSM
30120]
gi|212687611|gb|EEB47139.1| hypothetical protein PROVALCAL_00848 [Providencia alcalifaciens DSM
30120]
Length = 268
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 84/234 (35%), Gaps = 17/234 (7%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL--LSPQWKKDGNIIVL 71
++ + + + +G I LL ++ Y + ++ +D IV+
Sbjct: 31 WFTRWQKSGKSLVTISLFVIALLGLQPISDKLLAPVEGPYNKRYELITTNPPQDIKYIVV 90
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G T P + S R+ E +RLY +I G ++ +
Sbjct: 91 LGGGFTYNPD-WSPSSNLLSNSLPRVTEGVRLYLQHPGSK-----LIFTGGKASSPISSA 144
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V + GV D + DT + A +I LV+SA HL R+
Sbjct: 145 EVASMVAQSLGVPTADTIPLMEPKDTQEEAYEVEKIIGKQPFL---LVTSANHLPRALKM 201
Query: 192 FQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F G+ + ++ LN + IP + F +E A E +G + + +
Sbjct: 202 FTGRGMQPYPAPANQLVITSDLNPWERYIPSAYYFSHSERAWYELLGSIWWHLK 255
>gi|330963479|gb|EGH63739.1| hypothetical protein PSYAC_02287 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 256
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 90/240 (37%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + + + + ++ + ++ P
Sbjct: 16 ILFLMLILGWWLRRSRPRLAAACFAAGLGGLWLMSLPVVVEFAARKMEQIPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GADTPTGLGLERLRLAARLAKE-----SGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA ++++++ K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQALQQDFGVTVRWQEGL-SRTTWENATMTAAVLQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G + +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|242239630|ref|YP_002987811.1| hypothetical protein Dd703_2202 [Dickeya dadantii Ech703]
gi|242131687|gb|ACS85989.1| protein of unknown function DUF218 [Dickeya dadantii Ech703]
Length = 259
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 18/246 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + W Q ++ LL + + LL+ L+ Y S
Sbjct: 19 IMLVAGVALALLWFSRWQKTARLMLTGS-WLLLLLLSLQPVADRLLQPLESRYPTWNPS- 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
N IV+LG G T P A S R+ E +RLY++ +I +G
Sbjct: 77 --FPAVNYIVVLGGGYTFNPD-WAPSANLLSNSLPRVTEGIRLYRANP----GAKLIFTG 129
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
Q + ++ + GV DI L Q+ DT + A+ ++ ++ LV+
Sbjct: 130 AAAQGNTVSSARTAARVAESLGVPAQDILLLDQAHDTEEEARDAARLVGQQPFL---LVT 186
Query: 181 SAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGIL 234
SA HL R+ +F G++ + ++ LN + I P E A E +G+L
Sbjct: 187 SANHLPRAMNFFLSQGLHPIPAPANQLAITSPLNLWERIFPSPLYLSHAERAWYEELGLL 246
Query: 235 IAYYRG 240
+G
Sbjct: 247 WQRLKG 252
>gi|30264869|ref|NP_847246.1| hypothetical protein BA_5055 [Bacillus anthracis str. Ames]
gi|47530355|ref|YP_021704.1| hypothetical protein GBAA_5055 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187685|ref|YP_030938.1| hypothetical protein BAS4694 [Bacillus anthracis str. Sterne]
gi|165869591|ref|ZP_02214249.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167633993|ref|ZP_02392316.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|167638097|ref|ZP_02396375.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170685702|ref|ZP_02876925.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|170705528|ref|ZP_02895992.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177651307|ref|ZP_02934138.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190567172|ref|ZP_03020087.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227817596|ref|YP_002817605.1| hypothetical protein BAMEG_5089 [Bacillus anthracis str. CDC 684]
gi|229602236|ref|YP_002869074.1| hypothetical protein BAA_5066 [Bacillus anthracis str. A0248]
gi|254687608|ref|ZP_05151464.1| hypothetical protein BantC_27690 [Bacillus anthracis str.
CNEVA-9066]
gi|254725174|ref|ZP_05186957.1| hypothetical protein BantA1_22344 [Bacillus anthracis str. A1055]
gi|254736912|ref|ZP_05194618.1| hypothetical protein BantWNA_17226 [Bacillus anthracis str. Western
North America USA6153]
gi|254741947|ref|ZP_05199634.1| hypothetical protein BantKB_13153 [Bacillus anthracis str. Kruger
B]
gi|254754455|ref|ZP_05206490.1| hypothetical protein BantV_18392 [Bacillus anthracis str. Vollum]
gi|254757288|ref|ZP_05209315.1| hypothetical protein BantA9_03186 [Bacillus anthracis str.
Australia 94]
gi|30259544|gb|AAP28732.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47505503|gb|AAT34179.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49181612|gb|AAT56988.1| conserved domain protein [Bacillus anthracis str. Sterne]
gi|164714420|gb|EDR19939.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167513914|gb|EDR89282.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|167530794|gb|EDR93496.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170129653|gb|EDS98516.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|170670166|gb|EDT20906.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|172083133|gb|EDT68195.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190561676|gb|EDV15646.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227003708|gb|ACP13451.1| conserved domain protein [Bacillus anthracis str. CDC 684]
gi|229266644|gb|ACQ48281.1| conserved domain protein [Bacillus anthracis str. A0248]
Length = 345
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 108 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 211 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|291616915|ref|YP_003519657.1| YcbC [Pantoea ananatis LMG 20103]
gi|291151945|gb|ADD76529.1| YcbC [Pantoea ananatis LMG 20103]
Length = 308
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 19/236 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I+ W Q KI +S L+ I + LL ++ Y S + +
Sbjct: 61 ILLLWFSRWQKSGKI-LISVSWLIILLISLQPVADRLLLPVESHYSTWNGS----QKVDY 115
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +R + Q T++ +G +
Sbjct: 116 IVVLGGGYTYNP-AWAPSSNLLNNSLPRVTEGVRQWLRNPQ----ATMVFTGAAAGHNPK 170
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV I + Q DT Q A+ S++I + LV+SA H+ R+
Sbjct: 171 SNAWVAAQVAESLGVPDAHIHILDQPKDTEQEARAVSAVIGHHSFL---LVTSANHMPRA 227
Query: 189 QLYFQHFGINTKASCSDYL--NAYYSI----IPLSANFYLTELALKEYIGILIAYY 238
+FQ G+N A+ ++ L + + P +E A+ E +G ++
Sbjct: 228 MRFFQQAGLNPIAAPANQLAITSPLNWWERAFPSPLWMGHSERAIYETLGSVLQRI 283
>gi|301056307|ref|YP_003794518.1| hypothetical protein BACI_c47980 [Bacillus anthracis CI]
gi|300378476|gb|ADK07380.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 345
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 ILLFMLLPIINPASLVSSHFQPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 211 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|82544659|ref|YP_408606.1| hypothetical protein SBO_2208 [Shigella boydii Sb227]
gi|187732229|ref|YP_001880883.1| hypothetical protein SbBS512_E2405 [Shigella boydii CDC 3083-94]
gi|81246070|gb|ABB66778.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|187429221|gb|ACD08495.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|320173261|gb|EFW48470.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella dysenteriae CDC
74-1112]
gi|320187456|gb|EFW62146.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella flexneri CDC 796-83]
gi|332093351|gb|EGI98409.1| hypothetical protein SB359474_2557 [Shigella boydii 3594-74]
Length = 259
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTAKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|33865854|ref|NP_897413.1| hypothetical protein SYNW1320 [Synechococcus sp. WH 8102]
gi|33633024|emb|CAE07835.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 250
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + + M L G++ +L + ++ YQR S + + IV+L G P
Sbjct: 30 RRHWPVVAAMSLLWIFSTGVVSQLLWRWVEHPYQR--RSVERAPLADAIVVLSGGRHPAP 87
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKL 138
I + R + L++S + ++ + G H E +Y +
Sbjct: 88 GPAQIS---EWHDPDRFLAGVALFQSGRAS----RLLFTRGQNPFHPGLPPEGELYRAEA 140
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ GV I L + +T Q A ++ ++LV+SA+H++R+Q+ F+ G+
Sbjct: 141 VDLGVPATSIGLTDRVTNTAQEANAIRRLL-PQDQPRVLLVTSAFHMRRAQVLFERQGLT 199
Query: 199 TKASCSDYL----------NAYYSIIPLSANFYLTELALKEYIGILIAY 237
D+ +P S + + AL+E +G L
Sbjct: 200 VLPYPVDFQARAAWAGFIWRDPLQWLPNSRSLDDSSRALRELMGRLAYR 248
>gi|229099276|ref|ZP_04230207.1| hypothetical protein bcere0020_44960 [Bacillus cereus Rock3-29]
gi|228684094|gb|EEL38041.1| hypothetical protein bcere0020_44960 [Bacillus cereus Rock3-29]
Length = 277
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 40 MLFFMLLPIINPASLVSSHLEPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ K I
Sbjct: 143 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMASLKPEGKYRSI 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 203 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 249
>gi|15599180|ref|NP_252674.1| hypothetical protein PA3985 [Pseudomonas aeruginosa PAO1]
gi|107103503|ref|ZP_01367421.1| hypothetical protein PaerPA_01004573 [Pseudomonas aeruginosa PACS2]
gi|9950176|gb|AAG07372.1|AE004816_8 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Length = 253
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 87/236 (36%), Gaps = 13/236 (5%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGN 67
++W + C + + + + L+ P + +
Sbjct: 22 FFAFWWRTSRPRLARLCGVCGFFGLWLMSMPLSVEWMARWLESEPALLAEDLPGLAQRAD 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G PS + R+ RL + ++ISGG
Sbjct: 82 AIVILGAGRQTNDPAW-GDDAPSLLAAERLRYAARLA-----KTSALPVLISGGLHYGRP 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ + N LL+ + S T++NA S+ ++ + ++LV+ A+H++R
Sbjct: 136 PSEAALMANALLQDFGVPTRWQEGL-SRTTWENATLSAPQLREAGVRRVVLVTQAWHMQR 194
Query: 188 SQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ F+ G + + L + +P + F+ + + L E IG++
Sbjct: 195 ARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLNEAIGLVGYRL 250
>gi|300921042|ref|ZP_07137429.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300412033|gb|EFJ95343.1| conserved hypothetical protein [Escherichia coli MS 115-1]
Length = 259
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGLAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|15800781|ref|NP_286795.1| hypothetical protein Z1267 [Escherichia coli O157:H7 EDL933]
gi|15830257|ref|NP_309030.1| hypothetical protein ECs1003 [Escherichia coli O157:H7 str. Sakai]
gi|16128887|ref|NP_415440.1| conserved protein, DUF218 superfamily [Escherichia coli str. K-12
substr. MG1655]
gi|89107770|ref|AP_001550.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. W3110]
gi|91210021|ref|YP_540007.1| hypothetical protein UTI89_C0991 [Escherichia coli UTI89]
gi|117623138|ref|YP_852051.1| hypothetical protein APECO1_32 [Escherichia coli APEC O1]
gi|157155611|ref|YP_001462138.1| hypothetical protein EcE24377A_1017 [Escherichia coli E24377A]
gi|157160441|ref|YP_001457759.1| hypothetical protein EcHS_A1027 [Escherichia coli HS]
gi|168751183|ref|ZP_02776205.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168757012|ref|ZP_02782019.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168762943|ref|ZP_02787950.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168769915|ref|ZP_02794922.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168776227|ref|ZP_02801234.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168784117|ref|ZP_02809124.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168787349|ref|ZP_02812356.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168801395|ref|ZP_02826402.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|170020678|ref|YP_001725632.1| hypothetical protein EcolC_2676 [Escherichia coli ATCC 8739]
gi|170080578|ref|YP_001729898.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|170681104|ref|YP_001744250.1| hypothetical protein EcSMS35_2201 [Escherichia coli SMS-3-5]
gi|188494945|ref|ZP_03002215.1| conserved hypothetical protein [Escherichia coli 53638]
gi|194438715|ref|ZP_03070802.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208808261|ref|ZP_03250598.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208816346|ref|ZP_03257525.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208822106|ref|ZP_03262425.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209397397|ref|YP_002269592.1| hypothetical protein ECH74115_1080 [Escherichia coli O157:H7 str.
EC4115]
gi|217325067|ref|ZP_03441151.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218704347|ref|YP_002411866.1| hypothetical protein ECUMN_1113 [Escherichia coli UMN026]
gi|237707092|ref|ZP_04537573.1| YcbC [Escherichia sp. 3_2_53FAA]
gi|238900178|ref|YP_002925974.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|253774051|ref|YP_003036882.1| hypothetical protein ECBD_2675 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161034|ref|YP_003044142.1| hypothetical protein ECB_00924 [Escherichia coli B str. REL606]
gi|254792119|ref|YP_003076956.1| hypothetical protein ECSP_1024 [Escherichia coli O157:H7 str.
TW14359]
gi|256023379|ref|ZP_05437244.1| hypothetical protein E4_08394 [Escherichia sp. 4_1_40B]
gi|261227423|ref|ZP_05941704.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|291281921|ref|YP_003498739.1| hypothetical protein G2583_1155 [Escherichia coli O55:H7 str.
CB9615]
gi|293404225|ref|ZP_06648219.1| hypothetical protein ECGG_02613 [Escherichia coli FVEC1412]
gi|297516352|ref|ZP_06934738.1| hypothetical protein EcolOP_01862 [Escherichia coli OP50]
gi|298380005|ref|ZP_06989610.1| hypothetical protein ECFG_02808 [Escherichia coli FVEC1302]
gi|300901650|ref|ZP_07119710.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300929615|ref|ZP_07145077.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300937735|ref|ZP_07152536.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300949717|ref|ZP_07163696.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300955432|ref|ZP_07167806.1| hypothetical protein HMPREF9547_01317 [Escherichia coli MS 175-1]
gi|301022414|ref|ZP_07186297.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|301643440|ref|ZP_07243488.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|306812627|ref|ZP_07446820.1| hypothetical protein ECNC101_11962 [Escherichia coli NC101]
gi|307137549|ref|ZP_07496905.1| hypothetical protein EcolH7_05381 [Escherichia coli H736]
gi|312971048|ref|ZP_07785227.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331641446|ref|ZP_08342581.1| putative KicA protein [Escherichia coli H736]
gi|331662333|ref|ZP_08363256.1| putative KicA protein [Escherichia coli TA143]
gi|77416806|sp|P0AB02|YCBC_ECO57 RecName: Full=Uncharacterized protein ycbC
gi|77416807|sp|P0AB01|YCBC_ECOLI RecName: Full=Uncharacterized protein ycbC
gi|12514089|gb|AAG55405.1|AE005281_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|1787150|gb|AAC74006.1| conserved protein, DUF218 superfamily [Escherichia coli str. K-12
substr. MG1655]
gi|4062491|dbj|BAA35666.1| conserved inner membrane protein [Escherichia coli str. K12 substr.
W3110]
gi|13360462|dbj|BAB34426.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|91071595|gb|ABE06476.1| probable membrane protein [Escherichia coli UTI89]
gi|115512262|gb|ABJ00337.1| YcbC [Escherichia coli APEC O1]
gi|157066121|gb|ABV05376.1| conserved hypothetical protein [Escherichia coli HS]
gi|157077641|gb|ABV17349.1| conserved hypothetical protein [Escherichia coli E24377A]
gi|169755606|gb|ACA78305.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
gi|169888413|gb|ACB02120.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|170518822|gb|ACB17000.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|187768343|gb|EDU32187.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188014720|gb|EDU52842.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|188490144|gb|EDU65247.1| conserved hypothetical protein [Escherichia coli 53638]
gi|188998655|gb|EDU67641.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189355905|gb|EDU74324.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189361104|gb|EDU79523.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189366790|gb|EDU85206.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189372700|gb|EDU91116.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189376425|gb|EDU94841.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|194422347|gb|EDX38347.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208728062|gb|EDZ77663.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208732994|gb|EDZ81682.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208737591|gb|EDZ85274.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209158797|gb|ACI36230.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|209774788|gb|ACI85706.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774790|gb|ACI85707.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774792|gb|ACI85708.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774794|gb|ACI85709.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774796|gb|ACI85710.1| hypothetical protein ECs1003 [Escherichia coli]
gi|217321288|gb|EEC29712.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218431444|emb|CAR12322.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|222032651|emb|CAP75390.1| Uncharacterized protein ycbC [Escherichia coli LF82]
gi|226898302|gb|EEH84561.1| YcbC [Escherichia sp. 3_2_53FAA]
gi|238860178|gb|ACR62176.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|242376735|emb|CAQ31448.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|253325095|gb|ACT29697.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972935|gb|ACT38606.1| conserved inner membrane protein [Escherichia coli B str. REL606]
gi|253977149|gb|ACT42819.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|254591519|gb|ACT70880.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|260449934|gb|ACX40356.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|281178051|dbj|BAI54381.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284920771|emb|CBG33834.1| putative membrane protein [Escherichia coli 042]
gi|290761794|gb|ADD55755.1| hypothetical protein G2583_1155 [Escherichia coli O55:H7 str.
CB9615]
gi|291428811|gb|EFF01836.1| hypothetical protein ECGG_02613 [Escherichia coli FVEC1412]
gi|298279703|gb|EFI21211.1| hypothetical protein ECFG_02808 [Escherichia coli FVEC1302]
gi|299881255|gb|EFI89466.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|300317655|gb|EFJ67439.1| hypothetical protein HMPREF9547_01317 [Escherichia coli MS 175-1]
gi|300354943|gb|EFJ70813.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300450898|gb|EFK14518.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300457242|gb|EFK20735.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300462452|gb|EFK25945.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|301078154|gb|EFK92960.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|305853390|gb|EFM53829.1| hypothetical protein ECNC101_11962 [Escherichia coli NC101]
gi|307627653|gb|ADN71957.1| hypothetical protein UM146_12950 [Escherichia coli UM146]
gi|309701196|emb|CBJ00496.1| putative membrane protein [Escherichia coli ETEC H10407]
gi|310336809|gb|EFQ01976.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|312945440|gb|ADR26267.1| hypothetical protein NRG857_04195 [Escherichia coli O83:H1 str. NRG
857C]
gi|315135568|dbj|BAJ42727.1| hypothetical protein ECDH1ME8569_0871 [Escherichia coli DH1]
gi|315287553|gb|EFU46959.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|315619114|gb|EFU99694.1| conserved hypothetical protein [Escherichia coli 3431]
gi|320192594|gb|EFW67235.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
EC1212]
gi|320637788|gb|EFX07580.1| hypothetical protein ECO5101_23325 [Escherichia coli O157:H7 str.
G5101]
gi|320642913|gb|EFX12114.1| hypothetical protein ECO9389_03076 [Escherichia coli O157:H- str.
493-89]
gi|320648370|gb|EFX17025.1| hypothetical protein ECO2687_19186 [Escherichia coli O157:H- str. H
2687]
gi|320653686|gb|EFX21760.1| hypothetical protein ECO7815_15513 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659831|gb|EFX27387.1| hypothetical protein ECO5905_25023 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664300|gb|EFX31451.1| hypothetical protein ECOSU61_01678 [Escherichia coli O157:H7 str.
LSU-61]
gi|323190740|gb|EFZ76009.1| hypothetical protein ECRN5871_0979 [Escherichia coli RN587/1]
gi|323938026|gb|EGB34288.1| hypothetical protein ERCG_00752 [Escherichia coli E1520]
gi|323942836|gb|EGB39001.1| hypothetical protein ERDG_00704 [Escherichia coli E482]
gi|323953372|gb|EGB49238.1| hypothetical protein ERKG_00257 [Escherichia coli H252]
gi|323958225|gb|EGB53934.1| hypothetical protein ERLG_00664 [Escherichia coli H263]
gi|323962912|gb|EGB58486.1| hypothetical protein ERGG_00660 [Escherichia coli H489]
gi|323973205|gb|EGB68397.1| hypothetical protein ERHG_00864 [Escherichia coli TA007]
gi|326338185|gb|EGD62014.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
1125]
gi|326346162|gb|EGD69900.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
1044]
gi|331038244|gb|EGI10464.1| putative KicA protein [Escherichia coli H736]
gi|331060755|gb|EGI32719.1| putative KicA protein [Escherichia coli TA143]
Length = 259
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|146308799|ref|YP_001189264.1| hypothetical protein Pmen_3784 [Pseudomonas mendocina ymp]
gi|145577000|gb|ABP86532.1| protein of unknown function DUF218 [Pseudomonas mendocina ymp]
Length = 256
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 88/244 (36%), Gaps = 14/244 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLL--FSFIGWGIIPTILLKHLQFSYQ-RPL 57
M L++ + L + ++ + + + + L+
Sbjct: 12 MPPGLFLLLILFAWWLRRRFPRLATACFVAGVGGLWLMSLPAVVEWSARQLEREPALAEA 71
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P + + IV+LG G + +P + R+ RL ++ +
Sbjct: 72 QWPSLAQRADAIVILGAGREQGDPGWGLVDQPGLMALERLRYAARLARA-----SGLPLA 126
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+GG +E+ + + + E QS T++NAQ S+ +++ + ++
Sbjct: 127 ATGGLHYGQPPSEAALMADVMQRDYGLEIR-WREEQSRTTWENAQLSAELLQAQGVRRVV 185
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIG 232
LV+ A+H+ R++ F+ G + +L+ Y +P S + L E +G
Sbjct: 186 LVTQAWHMPRARWCFEQAGFEVITAPMGFLSKGYERPLGGWLPESRAIWQNSQLLNEALG 245
Query: 233 ILIA 236
+
Sbjct: 246 LWFY 249
>gi|228955081|ref|ZP_04117096.1| hypothetical protein bthur0006_44460 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228804591|gb|EEM51195.1| hypothetical protein bthur0006_44460 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 345
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|82777557|ref|YP_403906.1| hypothetical protein SDY_2338 [Shigella dysenteriae Sd197]
gi|309787791|ref|ZP_07682401.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|331651940|ref|ZP_08352959.1| putative KicA protein [Escherichia coli M718]
gi|81241705|gb|ABB62415.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308924190|gb|EFP69687.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|331050218|gb|EGI22276.1| putative KicA protein [Escherichia coli M718]
Length = 259
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLSLLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|30062454|ref|NP_836625.1| hypothetical protein S0980 [Shigella flexneri 2a str. 2457T]
gi|56479770|ref|NP_706838.2| hypothetical protein SF0916 [Shigella flexneri 2a str. 301]
gi|110804928|ref|YP_688448.1| hypothetical protein SFV_0921 [Shigella flexneri 5 str. 8401]
gi|191166971|ref|ZP_03028794.1| conserved hypothetical protein [Escherichia coli B7A]
gi|193064658|ref|ZP_03045737.1| conserved hypothetical protein [Escherichia coli E22]
gi|194428374|ref|ZP_03060915.1| conserved hypothetical protein [Escherichia coli B171]
gi|209918170|ref|YP_002292254.1| hypothetical protein ECSE_0979 [Escherichia coli SE11]
gi|218694393|ref|YP_002402060.1| hypothetical protein EC55989_0965 [Escherichia coli 55989]
gi|256020952|ref|ZP_05434817.1| hypothetical protein ShiD9_18687 [Shigella sp. D9]
gi|260843169|ref|YP_003220947.1| hypothetical protein ECO103_0964 [Escherichia coli O103:H2 str.
12009]
gi|260867092|ref|YP_003233494.1| hypothetical protein ECO111_0988 [Escherichia coli O111:H- str.
11128]
gi|300816976|ref|ZP_07097195.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300902921|ref|ZP_07120866.1| hypothetical protein HMPREF9536_01066 [Escherichia coli MS 84-1]
gi|301302471|ref|ZP_07208602.1| hypothetical protein HMPREF9347_01048 [Escherichia coli MS 124-1]
gi|307311693|ref|ZP_07591333.1| protein of unknown function DUF218 [Escherichia coli W]
gi|309795095|ref|ZP_07689515.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|332282175|ref|ZP_08394588.1| conserved hypothetical protein [Shigella sp. D9]
gi|30040700|gb|AAP16431.1| hypothetical protein S0980 [Shigella flexneri 2a str. 2457T]
gi|56383321|gb|AAN42545.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110614476|gb|ABF03143.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|190902965|gb|EDV62691.1| conserved hypothetical protein [Escherichia coli B7A]
gi|192927715|gb|EDV82330.1| conserved hypothetical protein [Escherichia coli E22]
gi|194413589|gb|EDX29870.1| conserved hypothetical protein [Escherichia coli B171]
gi|209911429|dbj|BAG76503.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218351125|emb|CAU96829.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|257758316|dbj|BAI29813.1| conserved predicted inner membrane protein [Escherichia coli
O103:H2 str. 12009]
gi|257763448|dbj|BAI34943.1| conserved predicted inner membrane protein [Escherichia coli
O111:H- str. 11128]
gi|281600279|gb|ADA73263.1| hypothetical protein SFxv_0991 [Shigella flexneri 2002017]
gi|300405063|gb|EFJ88601.1| hypothetical protein HMPREF9536_01066 [Escherichia coli MS 84-1]
gi|300530328|gb|EFK51390.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300842310|gb|EFK70070.1| hypothetical protein HMPREF9347_01048 [Escherichia coli MS 124-1]
gi|306908248|gb|EFN38747.1| protein of unknown function DUF218 [Escherichia coli W]
gi|308121399|gb|EFO58661.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|313650839|gb|EFS15240.1| hypothetical protein SF2457T_0842 [Shigella flexneri 2a str. 2457T]
gi|315060205|gb|ADT74532.1| conserved inner membrane protein [Escherichia coli W]
gi|315257961|gb|EFU37929.1| probable membrane protein [Escherichia coli MS 85-1]
gi|315296223|gb|EFU55530.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|320202316|gb|EFW76887.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli EC4100B]
gi|323174979|gb|EFZ60594.1| hypothetical protein ECLT68_0536 [Escherichia coli LT-68]
gi|323175457|gb|EFZ61052.1| hypothetical protein ECOK1180_5741 [Escherichia coli 1180]
gi|323379235|gb|ADX51503.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|324019071|gb|EGB88290.1| hypothetical protein HMPREF9542_02266 [Escherichia coli MS 117-3]
gi|324117215|gb|EGC11123.1| hypothetical protein ERBG_02930 [Escherichia coli E1167]
gi|332104527|gb|EGJ07873.1| conserved hypothetical protein [Shigella sp. D9]
gi|332759007|gb|EGJ89317.1| hypothetical protein SF434370_1174 [Shigella flexneri 4343-70]
gi|332760112|gb|EGJ90410.1| hypothetical protein SF274771_1134 [Shigella flexneri 2747-71]
gi|332762691|gb|EGJ92954.1| hypothetical protein SFK671_1086 [Shigella flexneri K-671]
gi|332767869|gb|EGJ98059.1| hypothetical protein SF293071_1100 [Shigella flexneri 2930-71]
gi|333007013|gb|EGK26508.1| hypothetical protein SFK218_1285 [Shigella flexneri K-218]
gi|333008904|gb|EGK28364.1| hypothetical protein SFK272_1422 [Shigella flexneri K-272]
gi|333020002|gb|EGK39273.1| hypothetical protein SFK304_1250 [Shigella flexneri K-304]
gi|333020214|gb|EGK39484.1| hypothetical protein SFK227_1149 [Shigella flexneri K-227]
Length = 259
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|330969451|gb|EGH69517.1| hypothetical protein PSYAR_03029 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 255
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 88/240 (36%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + LI+ +W + F + + + + + L+ P
Sbjct: 16 ILFFLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARRLEQIPPLPQQRWAM 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ SGG
Sbjct: 76 LAQQVDAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARLAKE-----SGLPILTSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T +NA S+++++ K ++LV+
Sbjct: 130 LHFDQPPSEAAIMAQSLQDDFAVTVRWQEGL-SRTTRENATMSAAILQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G + +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWCFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGMLLNEAAGLLVY 248
>gi|331646185|ref|ZP_08347288.1| putative KicA protein [Escherichia coli M605]
gi|330910700|gb|EGH39210.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli AA86]
gi|331044937|gb|EGI17064.1| putative KicA protein [Escherichia coli M605]
Length = 259
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|331682427|ref|ZP_08383046.1| putative KicA protein [Escherichia coli H299]
gi|331080058|gb|EGI51237.1| putative KicA protein [Escherichia coli H299]
Length = 259
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + I LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPIADRLLRPIENTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|323947291|gb|EGB43299.1| hypothetical protein EREG_01236 [Escherichia coli H120]
Length = 259
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV + I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPHEQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDCVGYETLGRIWQWLKG 251
>gi|229072307|ref|ZP_04205512.1| hypothetical protein bcere0025_44700 [Bacillus cereus F65185]
gi|229082056|ref|ZP_04214544.1| hypothetical protein bcere0023_46830 [Bacillus cereus Rock4-2]
gi|228701281|gb|EEL53779.1| hypothetical protein bcere0023_46830 [Bacillus cereus Rock4-2]
gi|228710844|gb|EEL62814.1| hypothetical protein bcere0025_44700 [Bacillus cereus F65185]
Length = 345
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|324113749|gb|EGC07724.1| hypothetical protein ERIG_02167 [Escherichia fergusonii B253]
Length = 259
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + I LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPIADHLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|228910647|ref|ZP_04074458.1| hypothetical protein bthur0013_47910 [Bacillus thuringiensis IBL
200]
gi|228848915|gb|EEM93758.1| hypothetical protein bthur0013_47910 [Bacillus thuringiensis IBL
200]
Length = 283
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ +L + + IF + ++ F+ + L + + + RP
Sbjct: 46 ILFFIMLPIINPANLFSEHFQFIFAAISLITMYFFVH---LSNFLSAYFLYQFNRP---- 98
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 99 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 148
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 149 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 208
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 209 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 255
>gi|109897531|ref|YP_660786.1| hypothetical protein Patl_1206 [Pseudoalteromonas atlantica T6c]
gi|109699812|gb|ABG39732.1| protein of unknown function DUF218 [Pseudoalteromonas atlantica
T6c]
Length = 251
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 93/230 (40%), Gaps = 13/230 (5%)
Query: 14 HLLCQSIRKIFFMSCF-MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
L Q R + SC +L F +L+K L+ Y LS + + IV+L
Sbjct: 28 RLPLQGRRIYQWASCVPILWVLFCSLVYPSVLLIKPLEDQYPTIKLSSNEWQLTDGIVVL 87
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
+P + P + R +Y I++ D + +++
Sbjct: 88 ACNHFDDDGLPFVSKWPQC-TMQRNLHAALMYNEKPLPIYLAAGILNETDLK----SQAQ 142
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L+ GV DI DT + + ++N ++ LVSSA HL R+ YF
Sbjct: 143 YNKDFLVTLGVNPKDIHTFPMGHDTESEVEALAPYLQNK---HMALVSSASHLPRAVEYF 199
Query: 193 QHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G++ ++L+ ++ +P + + Y +E A+ EY+G++ Y
Sbjct: 200 RLHGLSVLPIPVEHLSRKHVSFTIGLPNAYSLYRSERAIHEYLGLIYQRY 249
>gi|260597320|ref|YP_003209891.1| hypothetical protein CTU_15280 [Cronobacter turicensis z3032]
gi|260216497|emb|CBA29665.1| Uncharacterized protein ycbC [Cronobacter turicensis z3032]
Length = 230
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/233 (18%), Positives = 86/233 (36%), Gaps = 19/233 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
M+ L+ + + LLK ++ Y + + IV+LG
Sbjct: 2 WFTRFKKSGKVLMTASWLVLLLLSLQPVADGLLKPVEDDYPTW-----NGQKADYIVVLG 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G T A S R+ E +RL+ + ++ +G + ++ +
Sbjct: 57 GGYTWND-KWAPSSNLVNNSLPRVTEGVRLWLANP----GAKLVFTGARATTNPVSTAEA 111
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
GV R DI + ++++ + + +LV+SA HL R+ ++F+
Sbjct: 112 GARVAESLGVPRSDIITLDTPK---DTEEEATAVAGALGKEPFLLVTSASHLPRAMIFFK 168
Query: 194 HFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+N + ++ LN + + P S +E A E +G + +G
Sbjct: 169 RQGLNPIPAPANQMAIDSPLNPWERVYPSSLWLMHSERAGYELLGRAWQWVKG 221
>gi|228941987|ref|ZP_04104530.1| hypothetical protein bthur0008_46210 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974918|ref|ZP_04135479.1| hypothetical protein bthur0003_46680 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981511|ref|ZP_04141808.1| hypothetical protein bthur0002_46720 [Bacillus thuringiensis Bt407]
gi|228778190|gb|EEM26460.1| hypothetical protein bthur0002_46720 [Bacillus thuringiensis Bt407]
gi|228784771|gb|EEM32789.1| hypothetical protein bthur0003_46680 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817656|gb|EEM63738.1| hypothetical protein bthur0008_46210 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 345
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ + +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 211 GQGPDEGLPEAEAMQSYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|301381971|ref|ZP_07230389.1| hypothetical protein PsyrptM_05027 [Pseudomonas syringae pv. tomato
Max13]
Length = 256
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 95/247 (38%), Gaps = 15/247 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + + + + ++ + ++ P
Sbjct: 16 VLFLLLILGWWLRRSRPRLATACFAAGLGGLWLMSVPVVVEFAARKMEQIPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GADTPTGLGLERLRLAARLAKE-----SGLPILTAGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA+ ++++++ K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQALQQDFGVTVRWQEGL-SRTTWENAKMTAAVLQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
Query: 237 --YYRGN 241
YRG
Sbjct: 249 PWIYRGG 255
>gi|294491966|gb|ADE90722.1| conserved hypothetical protein [Escherichia coli IHE3034]
Length = 259
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVSARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|229153006|ref|ZP_04281187.1| hypothetical protein bcere0011_45370 [Bacillus cereus m1550]
gi|228630426|gb|EEK87074.1| hypothetical protein bcere0011_45370 [Bacillus cereus m1550]
Length = 345
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|293414200|ref|ZP_06656849.1| hypothetical protein ECDG_00753 [Escherichia coli B185]
gi|291434258|gb|EFF07231.1| hypothetical protein ECDG_00753 [Escherichia coli B185]
Length = 259
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLSLLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRDNP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|220935848|ref|YP_002514747.1| hypothetical protein Tgr7_2685 [Thioalkalivibrio sp. HL-EbGR7]
gi|219997158|gb|ACL73760.1| conserved protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 251
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 83/239 (34%), Gaps = 15/239 (6%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + L + + + LL L+ Y ++P +
Sbjct: 15 LIAIVLGLLFWGRRLGKGLVFAGIAWLYVAATPLFAGWLLAGLERGYP---VAPPLPEAA 71
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
IV+L G S S R+ RL+ +++SGG +
Sbjct: 72 GAIVVLAGGRHPDAPEYGGE-TVSPHSLERLRYGARLH-----RDTGLPLLVSGGRVRGD 125
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
A +LE + ET+S +T +NA FS+ ++ ++ +LVS A H+
Sbjct: 126 EPAAEADLLADVLEGELGVAVRWRETESRNTCENALFSAHLLAEAGIEHALLVSHALHMP 185
Query: 187 RSQLYFQHFGINTKASCS------DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ FQ + + ++P +LT AL EY+G++ +
Sbjct: 186 RAVWCFQRTELAVTPFPTLPMGDLSRHRGITVVLPQPRALWLTGQALHEYLGLVWYRVK 244
>gi|218548436|ref|YP_002382227.1| hypothetical protein EFER_1064 [Escherichia fergusonii ATCC 35469]
gi|218355977|emb|CAQ88593.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia fergusonii ATCC 35469]
gi|325496858|gb|EGC94717.1| hypothetical protein ECD227_0955 [Escherichia fergusonii ECD227]
Length = 259
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|213966840|ref|ZP_03394991.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|302058769|ref|ZP_07250310.1| hypothetical protein PsyrptK_02187 [Pseudomonas syringae pv. tomato
K40]
gi|302135145|ref|ZP_07261135.1| hypothetical protein PsyrptN_27398 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213928690|gb|EEB62234.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 256
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 94/247 (38%), Gaps = 15/247 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + + + + ++ + ++ P
Sbjct: 16 VLFLLLILGWWLRRSRPRLATACFAAGLGGLWLMSVPVVVEFAARKMEQIPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GADTPTGLGLERLRLAARLAKE-----SGLPILTAGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA ++++++ K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQALQQDFGVTVRWQEGL-SRTTWENATMTAAVLQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
Query: 237 --YYRGN 241
YRG
Sbjct: 249 PWIYRGG 255
>gi|331011324|gb|EGH91380.1| hypothetical protein PSYTB_16950 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 256
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARL-----SKTSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSLHDDFGVTARWQEGL-SRTTWENATMTAAVLQPLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|312144373|ref|YP_003995819.1| protein of unknown function DUF218 [Halanaerobium sp.
'sapolanicus']
gi|311905024|gb|ADQ15465.1| protein of unknown function DUF218 [Halanaerobium sp.
'sapolanicus']
Length = 252
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
Y S F + ++ FI +LL L+ + + + IV
Sbjct: 27 VYLFFKSDSKLIKFLATATLIFLIFISTAFGVKVLLLPLENYAEEISVDLEEDHP---IV 83
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLA 129
+LG G EPS S R+ + L+ +++ II SGG +
Sbjct: 84 VLGGGNYYKTD---GSAEPSVHSKQRLAKAYELH-----RTLNTKIIYSGGVGLGHDNFS 135
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ L G+E + + E Q+ T++NA + + + + I LV+SAYH+ RS
Sbjct: 136 EADAAKEFLSGLGLESEKYESEDQARSTYENALYIKKWLNENEIERIYLVTSAYHMYRSA 195
Query: 190 LYFQHFGINTK----ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F+ I+ D+ ++ + +P + AL E++GI+ Y R
Sbjct: 196 RAFRAQEIDFLAHHSGFIYDHKFSWLNYLPNRGALQVNLSALHEWVGIVWYYLR 249
>gi|228903313|ref|ZP_04067444.1| hypothetical protein bthur0014_44780 [Bacillus thuringiensis IBL
4222]
gi|228967916|ref|ZP_04128927.1| hypothetical protein bthur0004_47040 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228791783|gb|EEM39374.1| hypothetical protein bthur0004_47040 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228856274|gb|EEN00803.1| hypothetical protein bthur0014_44780 [Bacillus thuringiensis IBL
4222]
Length = 283
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ +L + + IF + ++ F+ + L + + + RP
Sbjct: 46 ILFFIMLPIINPANLFSEHFQFIFAAISLITMYFFVH---LSNFLSAYFLYQFNRP---- 98
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 99 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 148
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GKNII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 149 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKTEGKYRSI 208
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 209 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 255
>gi|218889732|ref|YP_002438596.1| hypothetical protein PLES_09901 [Pseudomonas aeruginosa LESB58]
gi|254236878|ref|ZP_04930201.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254242671|ref|ZP_04935993.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|313109425|ref|ZP_07795385.1| hypothetical protein PA39016_001790025 [Pseudomonas aeruginosa
39016]
gi|126168809|gb|EAZ54320.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196049|gb|EAZ60112.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769955|emb|CAW25717.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310881887|gb|EFQ40481.1| hypothetical protein PA39016_001790025 [Pseudomonas aeruginosa
39016]
Length = 253
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 87/236 (36%), Gaps = 13/236 (5%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGN 67
++W + C + + + + L+ P + +
Sbjct: 22 FFAFWWRTSRPRLARLCGVCGFFGLWLMSMPLSVEWMGRWLESEPALLAEDLPGLAQRAD 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G PS + R+ RL + ++ISGG
Sbjct: 82 AIVILGAGRQTNDPAW-GDDAPSLLAAERLRYAARLA-----KTSALPVLISGGLHYGRP 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ + N LL+ + S T++NA S+ ++ + ++LV+ A+H++R
Sbjct: 136 PSEAALMANALLQDFGVPTRWQEGL-SRTTWENATLSAPQLREAGVRRVVLVTQAWHMQR 194
Query: 188 SQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ F+ G + + L + +P + F+ + + L E IG++
Sbjct: 195 ARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLNEAIGLVGYRL 250
>gi|26246946|ref|NP_752986.1| hypothetical protein c1061 [Escherichia coli CFT073]
gi|110641117|ref|YP_668847.1| hypothetical protein ECP_0931 [Escherichia coli 536]
gi|191172139|ref|ZP_03033683.1| conserved hypothetical protein [Escherichia coli F11]
gi|215486045|ref|YP_002328476.1| hypothetical protein E2348C_0913 [Escherichia coli O127:H6 str.
E2348/69]
gi|218688763|ref|YP_002396975.1| hypothetical protein ECED1_0950 [Escherichia coli ED1a]
gi|227884115|ref|ZP_04001920.1| inner membrane protein [Escherichia coli 83972]
gi|300978421|ref|ZP_07174269.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301047819|ref|ZP_07194871.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|312969014|ref|ZP_07783221.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|26107346|gb|AAN79529.1|AE016758_133 Hypothetical protein ycbC [Escherichia coli CFT073]
gi|110342709|gb|ABG68946.1| putative membrane protein [Escherichia coli 536]
gi|190907666|gb|EDV67261.1| conserved hypothetical protein [Escherichia coli F11]
gi|215264117|emb|CAS08461.1| conserved predicted inner membrane protein [Escherichia coli
O127:H6 str. E2348/69]
gi|218426327|emb|CAR07152.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|227838867|gb|EEJ49333.1| inner membrane protein [Escherichia coli 83972]
gi|300300311|gb|EFJ56696.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300409663|gb|EFJ93201.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|307552759|gb|ADN45534.1| conserved inner membrane protein [Escherichia coli ABU 83972]
gi|312286416|gb|EFR14329.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|315291218|gb|EFU50578.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|320196586|gb|EFW71209.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli WV_060327]
gi|323967167|gb|EGB62591.1| hypothetical protein ERJG_01450 [Escherichia coli M863]
gi|323976693|gb|EGB71781.1| hypothetical protein ERFG_02482 [Escherichia coli TW10509]
gi|324009859|gb|EGB79078.1| hypothetical protein HMPREF9532_00410 [Escherichia coli MS 57-2]
gi|324012947|gb|EGB82166.1| hypothetical protein HMPREF9533_03015 [Escherichia coli MS 60-1]
gi|327253710|gb|EGE65339.1| hypothetical protein ECSTEC7V_1135 [Escherichia coli STEC_7v]
Length = 259
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + I LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPIADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|229062493|ref|ZP_04199806.1| hypothetical protein bcere0026_45600 [Bacillus cereus AH603]
gi|228716776|gb|EEL68467.1| hypothetical protein bcere0026_45600 [Bacillus cereus AH603]
Length = 344
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 107 ILFFIMLSIINPASLFSAHFQFIFAAISLITMYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPPEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|333006363|gb|EGK25871.1| hypothetical protein SFVA6_1402 [Shigella flexneri VA-6]
Length = 259
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGTRVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|289625792|ref|ZP_06458746.1| hypothetical protein PsyrpaN_11816 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289648423|ref|ZP_06479766.1| hypothetical protein Psyrpa2_11824 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330867188|gb|EGH01897.1| hypothetical protein PSYAE_08002 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330871076|gb|EGH05785.1| hypothetical protein PSYAE_28243 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 256
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPRLATAFFAFGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARL-----SKTSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSLHDDFGVTARWQEGL-SRTTWENATMTAAVLQQLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|328543434|ref|YP_004303543.1| hypothetical protein [polymorphum gilvum SL003B-26A1]
gi|326413179|gb|ADZ70242.1| DUF218 protein [Polymorphum gilvum SL003B-26A1]
Length = 265
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 91/245 (37%), Gaps = 13/245 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + + R + S LL G + +L+ L+ + P P+
Sbjct: 18 FVFLLIAAGLVLAFGRFRRIGLVLASAGGLLLGVAGLSPLANLLMVPLEDRFPAPSTLPE 77
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ I++LG + T + R+ L + Q + + G
Sbjct: 78 T---VDGILVLGGAIDTVVTGKRP-FPGLTTAGERVAVIPGLARRYPQALIVHSG--GSG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E+ G+ D + LE +SL+T+QNA ++ ++++ G+ +LV+S
Sbjct: 132 LLFGNSSTEAEGAAQLFESFGLAPDRLVLEDRSLNTWQNAVYTKALVEPRAGQTWLLVTS 191
Query: 182 AYHLKRSQLYFQHFGIN-TKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILI 235
A H+ R+ F+ G D+ +S ++A +E++G++
Sbjct: 192 AMHMPRAVGVFRKAGWTGVVPYPVDWRTRGPEDRLRVFGAVSDGLTRLDIAFREWVGLVA 251
Query: 236 AYYRG 240
G
Sbjct: 252 YRASG 256
>gi|126463807|ref|YP_001044920.1| hypothetical protein Rsph17029_3048 [Rhodobacter sphaeroides ATCC
17029]
gi|126105618|gb|ABN78148.1| protein of unknown function DUF218 [Rhodobacter sphaeroides ATCC
17029]
Length = 280
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 96/243 (39%), Gaps = 11/243 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL +L + + L+F +G + + L L+ +
Sbjct: 34 LLVLAVAAGLSALVLRRLRLAATLLLSSCLVFLAVGALPLSYLALSSLERGWPAD----P 89
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ I+LLG R ++ R T+ L + + + T G
Sbjct: 90 PVGEVAGIILLGGSEDAAAARKWRRPAV-TEAGDRYLATIALARRFPEARVLFTG--GSG 146
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E+ + L+ +GV+ + LE QS +T +NA+F+ +++ N + +LV+S
Sbjct: 147 RLFGAEIPEARIAREILVSAGVDPARLILEGQSRNTAENARFAKALVANQGQGSWLLVTS 206
Query: 182 AYHLKRSQLYFQHFGI-NTKASCSDYLNAYYS---IIPLSANFYLTELALKEYIGILIAY 237
A+H+ RS F G N +DY A L+ N L +A++E+IGIL
Sbjct: 207 AFHMPRSVETFCAAGWQNLVPWPTDYRTASLRDGIGWDLARNLDLLNVAVREWIGILAYR 266
Query: 238 YRG 240
G
Sbjct: 267 VTG 269
>gi|255036862|ref|YP_003087483.1| hypothetical protein Dfer_3103 [Dyadobacter fermentans DSM 18053]
gi|254949618|gb|ACT94318.1| protein of unknown function DUF218 [Dyadobacter fermentans DSM
18053]
Length = 256
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 11/246 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M +S +FL++ Y L+ ++ + + ++L + L++ Y+ PL++
Sbjct: 14 MPMSMLFLLLIYAFLVKNRRKQKWVIGLVIVLMYLMSNS----FLVRAALNWYEAPLVNI 69
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + +L +G +P R+ +T LYK+ K + T S
Sbjct: 70 SDIRETYDVGILLSGGLANTDMPDADHALMGDRGDRVLQTFLLYKAGKIRKILITG-ASA 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
D E+ L++ GV DI E ++ +T QNA S+ +++ M IL+
Sbjct: 129 DDAMAGKRGETKTAAALLVQWGVPAGDIVFEEKAKNTRQNALNSAQILRKMFPSGKYILI 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGIL 234
+SA+H++RS F+ GI TK +D+ Y +IP + + E +G +
Sbjct: 189 TSAFHMRRSVGCFEKAGIKTKPFPADFYGGYGELTVRKMIPEPSALDSFNVLWHEMVGFV 248
Query: 235 IAYYRG 240
I G
Sbjct: 249 IYKIMG 254
>gi|288958654|ref|YP_003448995.1| hypothetical protein AZL_018130 [Azospirillum sp. B510]
gi|288910962|dbj|BAI72451.1| hypothetical protein AZL_018130 [Azospirillum sp. B510]
Length = 264
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 94/243 (38%), Gaps = 11/243 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ + L + + ++ +L + + + ++ L+ + R +
Sbjct: 20 LVLMLALGAAMLRMRRWQRAGRRLVTLATVLLLLVMYTGLGALVALPLENRFPR----SE 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG T + ++ RI L + + T G
Sbjct: 76 PEGRIDGIIMLGGAVNPPITADRGDPSLN-EAAERILGFADLVRRHPEAKAVFTG--GSG 132
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
L E + L ++G+ D + E +S +T++NA FS M++ G+ IL++S
Sbjct: 133 QLLAPDLKEDVTARAALAQAGIPADRVLYEAESRNTWENAVFSKEMVRPRPGERWILITS 192
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAY 237
A H+ RS F+ G + DY L N + + A++E+IG+ +
Sbjct: 193 AMHMPRSVGIFREVGWPVEPYPVDYRTRHDARPILRFQLDQNLVILDDAVREWIGLAAYW 252
Query: 238 YRG 240
G
Sbjct: 253 AMG 255
>gi|323185374|gb|EFZ70738.1| hypothetical protein ECOK1357_1327 [Escherichia coli 1357]
Length = 248
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 16 LALLWFSRFQKTGKIF-ISIGWLSLLLLSLQPVADRLLRPIESTYSTW----NNSQKVDY 70
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 71 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGIAKTNTV 125
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 126 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 182
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 183 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 240
>gi|114562500|ref|YP_750013.1| hypothetical protein Sfri_1322 [Shewanella frigidimarina NCIMB 400]
gi|114333793|gb|ABI71175.1| protein of unknown function DUF218 [Shewanella frigidimarina NCIMB
400]
Length = 252
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 105/245 (42%), Gaps = 16/245 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI----FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
+ S + L+++ I+ + + +++ + + L L+ +
Sbjct: 15 IPFSIMLLVLAAVLWRTNRIKLLQFGRMLLVSAIVVLTLTSQSQVSYFLANSLESQHN-- 72
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
++ Q ++++LG+G + A++ + S + +R+ E +R ++ +Q CT+
Sbjct: 73 -VNHQPIAGSCVVMVLGSGNSEQQGHTAVQ-QLSSTALARLTEGVRQFRLGQQ----CTL 126
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+SG A + + E G+ + I + DT + A +I +
Sbjct: 127 IVSGWSGGYLKTAHATIMAQAAEELGIPKASIVAFNEPKDTIEEAHALQQLIG---LQPF 183
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-YSIIPLSANFYLTELALKEYIGILI 235
LV+SA H+ R+ + F G+ + + SD++ + + ++ ++ EY+G+L
Sbjct: 184 RLVTSATHMPRAMMIFTSLGMQPQPAPSDFIAHQGFWWRLDADQLLASQKSIHEYVGMLW 243
Query: 236 AYYRG 240
+ +G
Sbjct: 244 LHIKG 248
>gi|77465405|ref|YP_354908.1| hypothetical protein RSP_3403 [Rhodobacter sphaeroides 2.4.1]
gi|77389823|gb|ABA81007.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 280
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 11/214 (5%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L F +G + + L L+ + + I+LLG R
Sbjct: 63 LAFLAVGALPLSYLALSSLERVWPAD----PPVGEVAGIILLGGSEDAAAARKWRRPAV- 117
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
++ R T+ L + + + T G + E+ + L+ +GV+ + L
Sbjct: 118 TEAGDRYLATIALARRFPEARVLFTG--GSGRLFGAEIPEARIAREILVSAGVDPARLIL 175
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNA 209
E QS +T +NA+F+ +++ N + +LV+SA+H+ R+ F G + +DY A
Sbjct: 176 EGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQDLVPWPTDYRTA 235
Query: 210 YYSI---IPLSANFYLTELALKEYIGILIAYYRG 240
L+ N L +A++E+IGIL G
Sbjct: 236 SLRDGIGWDLARNLDLLNVAVREWIGILAYRVTG 269
>gi|119358364|ref|YP_913008.1| hypothetical protein Cpha266_2596 [Chlorobium phaeobacteroides DSM
266]
gi|119355713|gb|ABL66584.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides DSM
266]
Length = 250
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 89/250 (35%), Gaps = 17/250 (6%)
Query: 2 LLSWIFL---IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L FL + ++ + + L + L + + Y
Sbjct: 7 LFPIFFLPLGLCFLLFAAGLLLKSRGVIFFGVALLWVFSMPVTGDFLTRLVCGVYS-FRG 65
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S D + +V+L + P ++ R + L+++ K + T
Sbjct: 66 SAASLPDADAVVVLSGMIERVDGAPLGEW---GEAVDRFDGGIELFRAGKAPLLVFTGGW 122
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII- 177
+ + E + + + + GV + I++ + +T + A ++ + G
Sbjct: 123 IP--WRPDRVPEGELLSRRAVLLGVSPEAIRVTEKVENTAEEAVAVRRLLGSGLGSEKTV 180
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEY 230
LV+SAYH+ RS L F+ G+ D+ S +P + L+E AL+E
Sbjct: 181 ILVTSAYHMHRSVLLFRREGLRVIPFPVDFSFGGPESLTVLSFLPDAGALRLSERALREL 240
Query: 231 IGILIAYYRG 240
+GI +G
Sbjct: 241 LGIAFYRVKG 250
>gi|71737332|ref|YP_276508.1| hypothetical protein PSPPH_4392 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557885|gb|AAZ37096.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322689|gb|EFW78782.1| hypothetical protein PsgB076_22227 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330526|gb|EFW86505.1| hypothetical protein PsgRace4_08395 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 256
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPRLATAFFAFGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARL-----SKTSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSLHDDFGVTARWQEGL-SRTTWENATMTAAVLQPLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|294636892|ref|ZP_06715221.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
gi|291089900|gb|EFE22461.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
Length = 265
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 86/233 (36%), Gaps = 18/233 (7%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+S L + + LL L+ Y + + + +V+LG
Sbjct: 31 WFSRHQRMGKVLVSLAWLGIFLLSLQPLADRLLAPLEAEYP----TLNHGQQAHYVVVLG 86
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G T P A S +R+ E +R Q +I++G + + + + V
Sbjct: 87 GGYTYNP-QWAPSSNLINNSLARLTEGIRQLALNPQ----AQLILTGASARGNPYSSAAV 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
GV I + DT Q A+ + + + + ILV+SA HL R+ +F+
Sbjct: 142 AAQVARSLGVAEQRIIVLDSPRDTAQEAEAVAERVGHARL---ILVTSANHLPRALRFFR 198
Query: 194 HFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
H G++ + ++ LN + IP +E A E +G L G
Sbjct: 199 HQGLDPIPAPANQLAITSPLNPWERWIPSPLYLGHSERAWYETLGRLWQGLLG 251
>gi|144899829|emb|CAM76693.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 261
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 9/209 (4%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
+ + IL++ L+ + P P + + +++LG + + ++ + +
Sbjct: 50 IVAFVPWQAILVQPLENRFPGPSSLP---QRVDGVIVLGGALDPVVSAARDQVAANG-AV 105
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ + L + + + + G E+ V L E G D I E QS
Sbjct: 106 ERVNALIWLGRHYPKARLVFSG--GSGSVTTPDKKEAPVARRYLNELGFGTDGIVFEDQS 163
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI- 213
+T +NA ++ ++ G+ +LV+SA H+ RS F A DYL
Sbjct: 164 RNTRENAVYTKQLMAPKNGEVWLLVTSAMHMPRSMGAFAAVDWPVIAYPVDYLTTGEGGG 223
Query: 214 --IPLSANFYLTELALKEYIGILIAYYRG 240
L + F L E++G+L RG
Sbjct: 224 FAFDLGSAFSSIGNGLHEWLGLLYYRMRG 252
>gi|228923560|ref|ZP_04086840.1| hypothetical protein bthur0011_45360 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228836029|gb|EEM81390.1| hypothetical protein bthur0011_45360 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 283
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L+ + IF + + FI + L + + + RP
Sbjct: 46 ILFFIMLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 98
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 99 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 148
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 149 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 208
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 209 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 255
>gi|262197868|ref|YP_003269077.1| hypothetical protein Hoch_4693 [Haliangium ochraceum DSM 14365]
gi|262081215|gb|ACY17184.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 247
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 91/234 (38%), Gaps = 13/234 (5%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + + M L ++ +LL LQ + P++
Sbjct: 19 LAALGWLCARFRPRLGRGVMFTAWLFLWLASTPLVAGMLLVSLQTAPALPVV--GELPPA 76
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
IV+L G + R P + +RI L QH I+++GG
Sbjct: 77 QAIVILSAGQDLDAPEY-GRAMPDNDTLTRIAYGAHL-----QHRTALPILVTGGAATPG 130
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
A + V + L R + ++++T +NA+ +++++ + I LV+ A+H+
Sbjct: 131 SAAVAQVMLHTLESQLGARVR-WTDERAMNTHENARNAAAILSAEGIERIYLVTHAWHMP 189
Query: 187 RSQLYFQHFGINTKASCSDYLNAYY----SIIPLSANFYLTELALKEYIGILIA 236
R+ F+ G++ + + + + + S+IP + T A E++G L
Sbjct: 190 RALRSFEAEGLDVVPAPTGFRDRPWRGPRSLIPRWSAIRDTYRAAHEWVGRLYY 243
>gi|24373225|ref|NP_717268.1| hypothetical protein SO_1657 [Shewanella oneidensis MR-1]
gi|24347454|gb|AAN54712.1|AE015612_1 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 244
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/225 (20%), Positives = 90/225 (40%), Gaps = 12/225 (5%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + ++ L + L+K L+ Y ++ ++++LG+
Sbjct: 29 WRRPRLAKWAIAGAFTLLLVLSSQFSVDYLVKPLETQYP---INASSITGQCVVMVLGSA 85
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I A++ S + +R+ E +R + CT+++SG + + V
Sbjct: 86 HSDIEDATAVQ-SLSAVALARLTEGLR----QLKLGQDCTLVVSGWGGELTKHPHAEVMA 140
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
E GV+ I + DT + AQ+ N + LV+SA H+ R+ F
Sbjct: 141 KAAAELGVDASRIIQFPLARDTLEEAQYFKDHFGNQSVR---LVTSASHMPRAMAIFSGK 197
Query: 196 GINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G+ A+ +D+ + + N ++ AL EYIG L + +
Sbjct: 198 GLIASAAPTDFRARDDFYWRFTADNLLASQRALHEYIGRLWLWIK 242
>gi|310780398|ref|YP_003968730.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
gi|309749721|gb|ADO84382.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
Length = 252
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 15/244 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ +F+ + + + ++ I + K ++ Q + +
Sbjct: 17 IFIALFIFLGIFSNRYNLKKIKRVSILLGIILYIITIRPTVDLTAKLVENRVQP--AAAE 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ G V+LG G + I PS + R+ T LY S + TI I+GG
Sbjct: 75 EIEKGEAYVVLGGGIIEKTPVGNI---PSETASVRLMNTAILYNSHPK-----TIYITGG 126
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ES VY L+ + DI E +S T +NA+++S ++K KNI+LV+S
Sbjct: 127 KVTNQQVSESSVYKKILIGLNIPDSDILTEERSRTTMENARYTSELLKKSNIKNIVLVTS 186
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIA 236
A H+ RS++ F+ G N + Y+ Y IP S N + E+ GI+
Sbjct: 187 ASHMTRSKMTFEKQGFNVVPAPCGYIQNYKNYNMLDFIPRSDNLSYFMRLIWEFAGIVYY 246
Query: 237 YYRG 240
RG
Sbjct: 247 GIRG 250
>gi|300925402|ref|ZP_07141287.1| hypothetical protein HMPREF9548_03480 [Escherichia coli MS 182-1]
gi|301326634|ref|ZP_07219964.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|300418472|gb|EFK01783.1| hypothetical protein HMPREF9548_03480 [Escherichia coli MS 182-1]
gi|300846679|gb|EFK74439.1| conserved hypothetical protein [Escherichia coli MS 78-1]
Length = 259
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIRQWLKG 251
>gi|308125795|ref|ZP_07663526.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030]
gi|308113292|gb|EFO50832.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030]
Length = 187
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 78/184 (42%), Gaps = 15/184 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG + IP + S + R+ E +R+ + + + G
Sbjct: 1 MSGTIDYVMVLGNGHVVDDEIP-PTSQLSRAALMRLTEGIRILRMYPGAKLILS-----G 54
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + N L GV + DI L + DT++ A+ +++ ++ + LV+S
Sbjct: 55 YDGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEEARQAAAFVQQKEIV---LVTS 111
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+ R+ F GI + +++L + P + TEL EY+G +
Sbjct: 112 ASHMSRALYEFNAAGIKPIPAPTNFLAIDEVSQPWDKYSPKARYLEQTELFWHEYLGSVW 171
Query: 236 AYYR 239
R
Sbjct: 172 QRLR 175
>gi|289209654|ref|YP_003461720.1| hypothetical protein TK90_2494 [Thioalkalivibrio sp. K90mix]
gi|288945285|gb|ADC72984.1| protein of unknown function DUF218 [Thioalkalivibrio sp. K90mix]
Length = 215
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 84/220 (38%), Gaps = 17/220 (7%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ +LL + + L+K LQ + P D IV+LG G +
Sbjct: 2 LLVIGLLLSYSLSTPVFSYALMKPLQEGFAPP--DDNQLADAQAIVVLGAGYRSGAEEFS 59
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ R+ L+ +++SGG + + E+ L E GV
Sbjct: 60 GETVHDL-ALVRLRYAAYLHH-----RTGLPVMVSGGG-PEERVPEADYMAEVLKEYGVH 112
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I E + DT+ NA+ S+ + + + LVS A+H+ R+ F+ G+ + +
Sbjct: 113 P--ILREPNARDTWGNARHSAEQLHAEGIERVALVSHAHHMPRATWSFERAGLEIIPAPT 170
Query: 205 ------DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
D + P ++ + + LAL EY G+ +
Sbjct: 171 GAYVPRDNGWSLEGFRPQASAVWASWLALHEYWGMAWYRW 210
>gi|284039129|ref|YP_003389059.1| hypothetical protein Slin_4276 [Spirosoma linguale DSM 74]
gi|283818422|gb|ADB40260.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 272
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/256 (19%), Positives = 102/256 (39%), Gaps = 17/256 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
W+ + + L+ + + + + +F G + L ++ + + +P
Sbjct: 15 PAGWLVVALIGALLVKTARLRRQLIGLALGVFWLFGNSFLVNELALWWEYPIKPDMHAPG 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS-------YSRIFETMRLYKSCKQHSMHC 114
IVL G P + + + RI + + LYK+ +
Sbjct: 75 DSVKRVAIVLTGGMINGEREAPGKPLNRTHLARFLLGREADRIGQALYLYKTGAVQKVLI 134
Query: 115 TIIISGGDPQKHGLAESIVYN-NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+ + Q L + L+ +GV +DI LE +S +T +NA+FS+ +++
Sbjct: 135 SGGLGSWPFQPISLNDEGHLAGELLIIAGVRPEDIMLEGKSRNTHENARFSAPILRKHFD 194
Query: 174 KNII---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTE 224
K L++SA+H+KR+ FQ G+ T S++L ++P F+ +
Sbjct: 195 KAHYEYVLITSAWHMKRAIACFQKEGVQTIPFPSNFLGNRRLSGPAEWLLPDEEAFFESY 254
Query: 225 LALKEYIGILIAYYRG 240
++E++G + G
Sbjct: 255 YLIREFVGYITYKVVG 270
>gi|228993553|ref|ZP_04153461.1| hypothetical protein bpmyx0001_42800 [Bacillus pseudomycoides DSM
12442]
gi|228766144|gb|EEM14790.1| hypothetical protein bpmyx0001_42800 [Bacillus pseudomycoides DSM
12442]
Length = 342
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL + LIV + IF F++++ F I T L + + + RP
Sbjct: 107 MLLIMLSLIVDPTRFFSPHFQPIFTGIFFIMVYFFFH---ISTFLTAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYHKQAAVASPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV- 179
G L E+ +E G+ + E +S++T+QN FS ++ +++ + +
Sbjct: 210 GQGPDENLPEAEAMQKYAIEKGIPIEHTVQENRSVNTYQNMLFSKQIMDSLKDRYKSIFT 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 270 TNNFHLFRAGLYAKQAGLNSQGIGS-----------KTAFYYWPNAMIREYIAIVV 314
>gi|294340205|emb|CAZ88577.1| conserved hypothetical protein; putative exported protein
[Thiomonas sp. 3As]
Length = 252
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/237 (18%), Positives = 80/237 (33%), Gaps = 11/237 (4%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + F +LF + + L L+ + +
Sbjct: 19 LVFLSLFVTWRSHRFFTRFLTYAITVLFLLASMPLFANLALGALERKATQEKIC-SPPPP 77
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
G + V+L G P S R+ ++L + T++ISGG
Sbjct: 78 GTLFVVLAGGIDGNPMHAQDFSALKTASLKRLLAAVQLAQRTP----DSTLLISGG--WG 131
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ E+ + ++ G + L+T S TFQ A + I LV+SA H+
Sbjct: 132 RTVREANLMGALAVQLGFPASRMILDTASRTTFQTAVNTRERILQFPVGRRYLVTSADHM 191
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSII----PLSANFYLTELALKEYIGILIAYY 238
R+ + F H ++ A DY + P + T + E +G+L
Sbjct: 192 PRAMMAFAHEQVSICAWPVDYEAIPIQALDMLNPQISALDKTTRVVHELLGMLYYRL 248
>gi|87123192|ref|ZP_01079043.1| hypothetical protein RS9917_05015 [Synechococcus sp. RS9917]
gi|86168912|gb|EAQ70168.1| hypothetical protein RS9917_05015 [Synechococcus sp. RS9917]
Length = 250
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 87/227 (38%), Gaps = 18/227 (7%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R + + + L F G++ +L + L+ +QR + D IV+L G P
Sbjct: 30 RWRWPLIGALALLWFFSLGLVSQVLWRWLEAPWQRLPAAAAPTADA--IVVLSGGRHPAP 87
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ ++ R + LY++ K + T S + E Y + +
Sbjct: 88 GAARVS---EWEDPDRFLAGLDLYRAGKAPRLLFTGGASP--FRPGQPPEGQRYLAEAEQ 142
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ + + ++T + A ++ I+LV+SA+H++R+Q F+ G+ K
Sbjct: 143 LGIPSEAMASTPVVVNTAEEAVAIRRLL-QAPSARILLVTSAFHMRRAQRLFERQGLEVK 201
Query: 201 ASCSDYLNAYYS----------IIPLSANFYLTELALKEYIGILIAY 237
D+ +P + + AL+E +G L+
Sbjct: 202 PFPVDFQTRGAWAGSLWRDPSQWLPTAQALDHSSRALRELLGRLVYR 248
>gi|221369405|ref|YP_002520501.1| hypothetical protein RSKD131_3568 [Rhodobacter sphaeroides KD131]
gi|221162457|gb|ACM03428.1| Hypothetical Protein RSKD131_3568 [Rhodobacter sphaeroides KD131]
Length = 267
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 11/214 (5%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L F +G + + L L+ + + I+LLG R
Sbjct: 50 LAFLAVGALPLSYLALSSLERVWPAD----PPVGEVAGIILLGGSEDAAAARKWRRPAV- 104
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
++ R T+ L + + + T G + E+ + L+ +GV+ + L
Sbjct: 105 TEAGDRYLATIALARRFPEARVLFTG--GSGRLFGAEIPEARIAREILVSAGVDPARLIL 162
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNA 209
E QS +T +NA F+ +++ N + +LV+SA+H+ R+ F G + +DY A
Sbjct: 163 EGQSRNTAENAHFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQDLVPWPTDYRTA 222
Query: 210 YYS---IIPLSANFYLTELALKEYIGILIAYYRG 240
L+ N L +A++E+IGIL G
Sbjct: 223 SLRDGIGWDLARNLDLLNVAVREWIGILAYRVTG 256
>gi|28871924|ref|NP_794543.1| hypothetical protein PSPTO_4809 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855177|gb|AAO58238.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 256
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 94/247 (38%), Gaps = 15/247 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + + + + ++ + ++ P
Sbjct: 16 VLFLLLILGWWLRRSRPRLATACFAAGLGGLWLMSVPVVVEFAARKMEQIRPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GADTPTGLGLERLRLAARLAKE-----SGLPILTAGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA ++++++ K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQALQQDFGVTVRWQEGL-SRTTWENATMTAAVLQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMSRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
Query: 237 --YYRGN 241
YRG
Sbjct: 249 PWIYRGG 255
>gi|229193086|ref|ZP_04320041.1| hypothetical protein bcere0002_47360 [Bacillus cereus ATCC 10876]
gi|228590350|gb|EEK48214.1| hypothetical protein bcere0002_47360 [Bacillus cereus ATCC 10876]
Length = 345
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + II SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPIIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|307721211|ref|YP_003892351.1| hypothetical protein Saut_1291 [Sulfurimonas autotrophica DSM
16294]
gi|306979304|gb|ADN09339.1| protein of unknown function DUF218 [Sulfurimonas autotrophica DSM
16294]
Length = 248
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ +F I + + + +S + L + L+++L+ Y +
Sbjct: 20 LVVTLFAIGLFLLHVKRVRAAKIMLSLGLFLLLLFSYPPFTNFLVQNLENQYPKF----D 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ ++ I +LGNG + P S + R+ E + ++K II G
Sbjct: 76 YTQNVKYIHVLGNGHNTDKSQPISSQISSGGT-KRVLEGVIIHKRMPGSK-----IIFTG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K +++ G++ +D+ + + DT + A F+ +++ N ++ ILV+S
Sbjct: 130 YEGKTDTPNAVMNAKLANALGIKYEDMIINGKPTDTKEEALFTKTLVGN---ESFILVTS 186
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYS---IIPLSANFYLTELALKEYIGILIAYY 238
A H+ R+ + F G++ + ++Y + + P F+++ +A+ EY+GIL A
Sbjct: 187 ATHMPRAMMLFTSLGMHPIPAPTNYYKSEFRGYLRAPDPGCFFISSIAIHEYLGILWAKL 246
Query: 239 R 239
+
Sbjct: 247 K 247
>gi|332561062|ref|ZP_08415380.1| hypothetical protein RSWS8N_18489 [Rhodobacter sphaeroides WS8N]
gi|332274860|gb|EGJ20176.1| hypothetical protein RSWS8N_18489 [Rhodobacter sphaeroides WS8N]
Length = 267
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 11/214 (5%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L F +G + + L L+ + + I+LLG R
Sbjct: 50 LAFLAVGALPLSYLALSSLERVWPAD----PPVGEVAGIILLGGSEDAAAARKWRRPAV- 104
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
++ R T+ L + + + T G + E+ + L+ +GV+ + L
Sbjct: 105 TEAGDRYLATIALARRFPEARVLFTG--GSGRLFGAEIPEARIAREILVSAGVDPARLIL 162
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNA 209
E QS +T +NA+F+ +++ N + +LV+SA+H+ R+ F G + +DY A
Sbjct: 163 EGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQDLVPWPTDYRTA 222
Query: 210 YYS---IIPLSANFYLTELALKEYIGILIAYYRG 240
L+ N L +A++E+IGIL G
Sbjct: 223 SLRDGIGWDLARNLDLLNVAVREWIGILAYRVTG 256
>gi|228999589|ref|ZP_04159166.1| hypothetical protein bmyco0003_41440 [Bacillus mycoides Rock3-17]
gi|229007135|ref|ZP_04164760.1| hypothetical protein bmyco0002_40340 [Bacillus mycoides Rock1-4]
gi|228754114|gb|EEM03534.1| hypothetical protein bmyco0002_40340 [Bacillus mycoides Rock1-4]
gi|228760115|gb|EEM09084.1| hypothetical protein bmyco0003_41440 [Bacillus mycoides Rock3-17]
Length = 342
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 29/236 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL + LIV + IF F++++ F I T L + + + RP
Sbjct: 107 MLLIMLSLIVDPTRFFSPHFQPIFTGIFFIMVYFFFH---ISTFLTAYFLYQFNRPRC-- 161
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 162 ----NQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYHKQAAVASPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV- 179
G L E+ +E G+ + E +S++T+QN FS ++ +++ + +
Sbjct: 210 GQGPDENLPEAEAMQKYAIEKGIPIEHTVQENRSVNTYQNMLFSKQIMDSLKDRYKSIFT 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 270 TNNFHLFRAGLYAKQAGLNSQGIGS-----------KTAFYYWPNAMIREYIAIVV 314
>gi|157376071|ref|YP_001474671.1| hypothetical protein Ssed_2936 [Shewanella sediminis HAW-EB3]
gi|157318445|gb|ABV37543.1| protein of unknown function DUF218 [Shewanella sediminis HAW-EB3]
Length = 251
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 12/227 (5%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+S ++L F+ L L+ YQ ++ D ++++LG+G
Sbjct: 30 RNRKLVRSILSVAIVLLVFLSSTPGSNFLSSPLESQYQ---VNSAPIADACLVMVLGSGH 86
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ AI+ + S + +R+ E MR + + C ++ SG + + + V
Sbjct: 87 DDSISGTAIQ-QLSSTALARLSEGMRQFNLGR----DCKLVFSGWNGGTGLHSHAEVMAA 141
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+E G+ ++ I + DT + AQF I N LV+SA H+ RS F + G
Sbjct: 142 AAVELGIPKNRIITFPLAKDTIEEAQFMKWEIGN---VPFRLVTSASHMPRSMSTFANIG 198
Query: 197 INTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ +A+ +D++ Y + N + ++ A+ EY+G L + +R
Sbjct: 199 LTPQAAPTDFITREGYWWRLDAHNLWSSQRAIHEYVGKLWFQIKHHR 245
>gi|260854211|ref|YP_003228102.1| hypothetical protein ECO26_1046 [Escherichia coli O26:H11 str.
11368]
gi|257752860|dbj|BAI24362.1| conserved predicted inner membrane protein [Escherichia coli
O26:H11 str. 11368]
gi|323157193|gb|EFZ43316.1| hypothetical protein ECEPECA14_0984 [Escherichia coli EPECa14]
Length = 259
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG+G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGDGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|86749502|ref|YP_485998.1| hypothetical protein RPB_2382 [Rhodopseudomonas palustris HaA2]
gi|86572530|gb|ABD07087.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 264
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 99/243 (40%), Gaps = 11/243 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ I + L + ++L G+ + ++LL L + S +
Sbjct: 19 IAVICAVGVLMLLTRWRRAGARVLGVGVVLLLIAGYSPLGSVLLLSLSERFPPWQFSGRA 78
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I++LG + +E S R+ + L + Q + + G+
Sbjct: 79 P---DGIIVLGGAIDSEVSAARDAVELD-SSAERVMAALELARDYPQARIVYSG--GSGN 132
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++ +AE+ + + GV D +E++S T +NA F+ ++ G+ +LV+SA
Sbjct: 133 LIQNSVAEAPIAADLFARFGVAPDRFVVESRSRTTAENASFTRELVSPKPGEVWLLVTSA 192
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKEYIGILIAY 237
+H+ RS F+ G + A+ D+ + LS+ T++A E+ G+L
Sbjct: 193 FHMPRSITAFRAAGFDVTAAPVDWRTRGWGDAARPFDRLSSGLARTDVAAHEWAGLLAYR 252
Query: 238 YRG 240
G
Sbjct: 253 LSG 255
>gi|332307549|ref|YP_004435400.1| hypothetical protein Glaag_3198 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174878|gb|AEE24132.1| protein of unknown function DUF218 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 251
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 94/230 (40%), Gaps = 13/230 (5%)
Query: 14 HLLCQSIRKIFFMSCF-MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
++ + R ++SC +L F +L+K L+ Y +S + ++ + IV+L
Sbjct: 28 RIVPKGKRVYQWLSCLPILWVFFCSLVYPSVLLIKPLEDQYPTVKVSSKLWQNADAIVVL 87
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
+P + + R +YK I++ +++
Sbjct: 88 ACNHFDDEGLPFV-SRWPQCTMQRNLHAALMYKEKHLPIHLAAGILNE----LDSASQAH 142
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L+ GV +DI Q DT ++ +++ K + LV+SA HL R+ YF
Sbjct: 143 YNKTFLMTLGVSPNDIYTHPQGHDTESE---VDALAPHLKNKYVALVTSASHLPRAVQYF 199
Query: 193 QHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ I ++L+ ++ +P + + Y +E A+ EY+G++ Y
Sbjct: 200 ELHDIKVLPIPVEHLSRKNVSFTIGLPNAFSLYRSERAIHEYLGLIYQRY 249
>gi|327393342|dbj|BAK10764.1| uncharacterized conserved protein YcbC [Pantoea ananatis AJ13355]
Length = 342
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 87/235 (37%), Gaps = 18/235 (7%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ +S L+ I + LL ++ Y S + + I
Sbjct: 111 ILLLWFSRWQKSGKILISVSWLIILLISLQPVADRLLLPVESRYSTWNGS----QKVDYI 166
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG G T P A S R+ E +R + Q T++ +G + +
Sbjct: 167 VVLGGGYTYNP-AWAPSSNLLNNSLPRVTEGVRQWLRNPQ----ATMVFTGAAAGHNPKS 221
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ V GV I + Q DT Q A+ S++I + LV+SA H+ R+
Sbjct: 222 NAWVAAQVAESLGVPDAHIHILDQPKDTEQEARAVSAVIGHHSFL---LVTSANHMPRAM 278
Query: 190 LYFQHFGINTKASCSDYL--NAYYSI----IPLSANFYLTELALKEYIGILIAYY 238
+FQ G+N A+ ++ L + + P +E A+ E +G +
Sbjct: 279 RFFQQAGLNPIAAPANQLAITSPLNWWERAFPSPLWMGHSERAIYETLGSALQRI 333
>gi|332534944|ref|ZP_08410763.1| hypothetical protein PH505_bx00130 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035617|gb|EGI72108.1| hypothetical protein PH505_bx00130 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 254
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 90/244 (36%), Gaps = 17/244 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L +F + +F + +++ + I +++++ +
Sbjct: 15 LPLFGLFACLMLLLAFKGRKSALFLSTLSLIVLLALSTPFIANLIIQN--NEPASLAFNT 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG P + A + + +R+ E +RL K + +I+SG
Sbjct: 73 LKHPKIDKIVVLGCDINPNPALSANN-QLGNCALTRLVEGVRLAKHYP----NAELIVSG 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + S + + GV + I +++ + + + + + LV+
Sbjct: 128 GGYKN--ITNSGLMYQTAISLGVNKSRIFQNPKAM---DTGEEAKLLASKLVDFKVALVT 182
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA---YYS--IIPLSANFYLTELALKEYIGILI 235
S H+ R++ F GI + +DY N +S IP + + E +G +
Sbjct: 183 SVLHMPRAKDLFNAQGIEVITAATDYHNFAALPWSKQFIPNAHALIVVTQYSHEVVGNIW 242
Query: 236 AYYR 239
R
Sbjct: 243 ISLR 246
>gi|261256154|ref|ZP_05948687.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK966]
Length = 259
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGCIWQWLKG 251
>gi|218899964|ref|YP_002448375.1| hypothetical protein BCG9842_B0316 [Bacillus cereus G9842]
gi|218541300|gb|ACK93694.1| conserved domain protein [Bacillus cereus G9842]
Length = 345
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ +L + + IF + ++ F+ + L + + + RP
Sbjct: 108 ILFFIMLPIINPANLFSEHFQFIFAAISLITMYFFVH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GKNII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKTEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|167035834|ref|YP_001671065.1| hypothetical protein PputGB1_4845 [Pseudomonas putida GB-1]
gi|166862322|gb|ABZ00730.1| protein of unknown function DUF218 [Pseudomonas putida GB-1]
Length = 253
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 87/228 (38%), Gaps = 12/228 (5%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK-DGNIIVLLGNG 75
+ + + + + ++ + L+ + + IV+LG G
Sbjct: 30 RRPRLAVLCFAVGLGGLWLMSLPLVVQETARQLETEPPLVVDDWAGLASRADAIVVLGAG 89
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+P+ + R+ RL K+ ++ SGG +E+ +
Sbjct: 90 RERGDPAWGGSDQPTATALERMRFAARLAKA-----SGLPVLTSGGLHYGTPPSEARLMA 144
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++L E E S T++NAQ ++ +++ + + ++LV+ A+H++RS+ F+
Sbjct: 145 DRLQE-DFAVAVKWREEASRTTWENAQLTAKVLQPLGIRRVVLVTQAWHMQRSRWSFEQA 203
Query: 196 GINTKASCS-----DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G + D+ + ++P S + + E +G++
Sbjct: 204 GFEVVPAPVGFLGRDHARPFAGLLPESRAMWQSGQLFNEVVGLVGYRV 251
>gi|301023042|ref|ZP_07186851.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300397248|gb|EFJ80786.1| conserved hypothetical protein [Escherichia coli MS 69-1]
Length = 259
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 19/237 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++FQ G+N + ++ LN + IP ++ E +G + + +
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLK 250
>gi|195953339|ref|YP_002121629.1| protein of unknown function DUF218 [Hydrogenobaculum sp. Y04AAS1]
gi|195932951|gb|ACG57651.1| protein of unknown function DUF218 [Hydrogenobaculum sp. Y04AAS1]
Length = 244
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 27/228 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
++ + +L + + L+ L+ +Y +P + + N IV+LG G
Sbjct: 32 RNKKIKILSFGMTILLYLLSITPVKDALITPLERTYSQP----KGFLNANAIVVLGGGYY 87
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
S ++ R+ + L K + + I P+ + +
Sbjct: 88 KN-------GNLSGETVKRLLAGVYLSYKTKIP-LILSGIDIKYLPKNTPIVK------- 132
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHLKRSQLYFQH 194
L + ++ +I + +S DT QNA S + + LV+SAYH+ R+++ F
Sbjct: 133 -LINAIDIGNIYEDVKSKDTMQNAAQSYKVCTRYITPDCNSIILVTSAYHMPRAKMLFDR 191
Query: 195 FGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
F N DY S +P ++ + A++EY+GIL +
Sbjct: 192 FFKNVIPYPVDYKEDLRYNVRSFLPNMSDLENSTKAIREYLGILYYFI 239
>gi|238785813|ref|ZP_04629783.1| hypothetical protein yberc0001_25450 [Yersinia bercovieri ATCC
43970]
gi|238713266|gb|EEQ05308.1| hypothetical protein yberc0001_25450 [Yersinia bercovieri ATCC
43970]
Length = 263
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 94/242 (38%), Gaps = 20/242 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
++ W Q K F ++L I + LL L+ Y + Q
Sbjct: 25 LALILLWFTRWQKSGKTLFTLSWLL-LLLISLQPVADRLLLPLEKQYA----TYQGNDPV 79
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P P S R+ E +RLY++ M T G +
Sbjct: 80 DYIVVLGGGYTFNPNWP-PSANLFANSLPRVTEGVRLYRAHPNAKMVFT-----GASTPN 133
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI Q DT + A ++++ + LV+SA HL
Sbjct: 134 NQSSAKTAAQVAESLGVPAADIVTLEQPKDTVEEAAAVATLVGDKPFL---LVTSASHLP 190
Query: 187 RSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +F G++ + ++ L+++ IP +A +E A E +G++ G
Sbjct: 191 RAIKFFTAIGLHPIPAPANQLAITTPLHSWERTIPAAAYLGHSERAWYETMGLMWQKLSG 250
Query: 241 NR 242
++
Sbjct: 251 HK 252
>gi|30022866|ref|NP_834497.1| hypothetical protein BC4795 [Bacillus cereus ATCC 14579]
gi|229130080|ref|ZP_04259042.1| hypothetical protein bcere0015_45180 [Bacillus cereus BDRD-Cer4]
gi|29898425|gb|AAP11698.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
gi|228653397|gb|EEL09273.1| hypothetical protein bcere0015_45180 [Bacillus cereus BDRD-Cer4]
Length = 345
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISIYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPIEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|330987615|gb|EGH85718.1| hypothetical protein PLA107_21508 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 256
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARL-----SKTSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSLHDDFGVTARWQEGL-SRTTWENATMTAAVLQPLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFETAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|324328702|gb|ADY23962.1| hypothetical protein YBT020_23670 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 344
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + + IF + ++ FI + L + + + RP
Sbjct: 107 ILFFIMLPIINPASLFSEHFQFIFAAISLITMYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ N I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYNSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|323159547|gb|EFZ45527.1| hypothetical protein ECE128010_4163 [Escherichia coli E128010]
Length = 259
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 19/237 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++FQ G+N + ++ LN + IP ++ E +G + + +
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLK 250
>gi|113477800|ref|YP_723861.1| hypothetical protein Tery_4400 [Trichodesmium erythraeum IMS101]
gi|110168848|gb|ABG53388.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 273
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 89/255 (34%), Gaps = 22/255 (8%)
Query: 3 LSWIFLIVS--YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
S I L+ + + +++ + + ++ +
Sbjct: 18 FSIILLVYATTLISGGGIKNPAPALIITALIVMIISSAPVFAVWSAQQVEEDAIEIVSVS 77
Query: 61 QW-KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + IVLLG GTT I+I+ ++ RI LYK II+S
Sbjct: 78 ACCDEKADAIVLLGQGTTQPIVPDRIQIQL-TKTAERITYAAELYKKGLAPY----IIVS 132
Query: 120 GGDPQKHGLA--ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNI 176
G + E+ L+ V R I +E S +++A + ++ +
Sbjct: 133 AGPRIGEDINTIEAEDITRVLVLLNVPRTAIIIEPHSSTVYESAIETREILNERGLDPTV 192
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSD-----------YLNAYYSIIPLSANFYLTEL 225
ILVSSA ++R+ L F G+ + +D Y P + LT
Sbjct: 193 ILVSSAIQIRRASLTFTDIGMKVIPAPTDFNTVNPYENSSYRFVLADFFPNTEAISLTTE 252
Query: 226 ALKEYIGILIAYYRG 240
+EY+ + + RG
Sbjct: 253 VWEEYLALFYYFLRG 267
>gi|75758871|ref|ZP_00738983.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74493637|gb|EAO56741.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 351
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ +L + + IF + ++ F+ + L + + + RP
Sbjct: 114 ILFFIMLPIINPANLFSEHFQFIFAAISLITMYFFVH---LSNFLSAYFLYQFNRP---- 166
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 167 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 216
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GKNII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 217 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKTEGKYRSI 276
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 277 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 323
>gi|163942531|ref|YP_001647415.1| hypothetical protein BcerKBAB4_4633 [Bacillus weihenstephanensis
KBAB4]
gi|163864728|gb|ABY45787.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 344
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + + IF + ++ FI + L + + + RP
Sbjct: 107 ILFCVLIPIINPASLFSEHFQFIFAAISLVTMYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 210 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|218700561|ref|YP_002408190.1| hypothetical protein ECIAI39_2227 [Escherichia coli IAI39]
gi|331672456|ref|ZP_08373246.1| putative KicA protein [Escherichia coli TA280]
gi|218370547|emb|CAR18354.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
gi|331070362|gb|EGI41727.1| putative KicA protein [Escherichia coli TA280]
Length = 259
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 19/237 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++FQ G+N + ++ LN + IP ++ E +G + + +
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLK 250
>gi|110597106|ref|ZP_01385395.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
gi|110341297|gb|EAT59762.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
Length = 249
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 84/227 (37%), Gaps = 15/227 (6%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ + +++ ++ T L++ ++ R +S + + +V+L +
Sbjct: 30 RRLLIGLAIMVLGMFSLPVVSTSLIRAVEGWSTRVPVSS--LHNADAVVVLSGIVVQLEG 87
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
P R + L+K+ K + T Q + E + +
Sbjct: 88 APLGEW---NDGVDRFEGGIDLFKAGKAPVIVFTR--GQVPWQPDAVPEGELLAKRATLL 142
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL--VSSAYHLKRSQLYFQHFGINT 199
GV + I L + +T A + ++ G + V+SA+H++R+ + F+ G
Sbjct: 143 GVPENAILLTAVAGNTADEAVAAGKLLGVRSGVRKKIILVTSAFHMRRAAMQFEKAGFQV 202
Query: 200 KASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
D+ +P + ++ +AL+E IG L + +G
Sbjct: 203 DRYPVDFQAGDNSEMTILDFLPDAGALEMSSIALREMIGWLYYWVKG 249
>gi|152985105|ref|YP_001346509.1| hypothetical protein PSPA7_1123 [Pseudomonas aeruginosa PA7]
gi|150960263|gb|ABR82288.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 253
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 89/236 (37%), Gaps = 13/236 (5%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGN 67
+++W + C + + + + ++ R P + +
Sbjct: 22 FLAFWWRDRRPRLARLCGVCGFFGLWLMSMPLSVEWMGRWIESEPALRAEDWPGLAQRAD 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G PS + R+ RL ++ ++ SGG
Sbjct: 82 AIVILGAGRQTSDPAW-GDDAPSLLAAERLRYAARLARA-----SSLPVLTSGGLHYGRP 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ + N LLE + S T++NA S+ ++ + ++LV+ A+H++R
Sbjct: 136 PSEAALMANALLEDFGVPARWQEGL-SRTTWENATLSAPQLREAGVRRVVLVTQAWHMQR 194
Query: 188 SQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ F+ G + + L + +P + F+ + + L E +G+L
Sbjct: 195 ARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLNEAVGLLGYRL 250
>gi|119775365|ref|YP_928105.1| hypothetical protein Sama_2230 [Shewanella amazonensis SB2B]
gi|119767865|gb|ABM00436.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 245
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 85/226 (37%), Gaps = 12/226 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + + + F+ +++ L+ Y +P+ ++ +LG+
Sbjct: 28 IWRRRALARSLLMLSIAALVFLSSTFGSNLIISPLEQRYSA---NPRPILGDCVVSVLGS 84
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
A++ + S + +R+ E + CT+I+SG + A + V
Sbjct: 85 EHDDAIFGSAVQ-QLSPVALARLTEGL----KQMSLGQDCTLIVSGYRSDYNRFAHADVM 139
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+E GV I + DT + A+ ++ + LV+SA H+ R+ F H
Sbjct: 140 KQAAMELGVPEAQIIALPLARDTLEEARQIKALGLQGALR---LVTSAAHMPRAMAMFAH 196
Query: 195 FGINTKASCSDYLNAY-YSIIPLSANFYLTELALKEYIGILIAYYR 239
GI A+ +D+ + + A+ EY+G L R
Sbjct: 197 EGITADAAPTDFTARQSTWWRLNADALNSAQKAIHEYVGTLWFELR 242
>gi|154249896|ref|YP_001410721.1| hypothetical protein Fnod_1217 [Fervidobacterium nodosum Rt17-B1]
gi|154153832|gb|ABS61064.1| protein of unknown function DUF218 [Fervidobacterium nodosum
Rt17-B1]
Length = 219
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 97/236 (41%), Gaps = 25/236 (10%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
++ + + + F F L+F F+ + ++ + + + G
Sbjct: 1 MFLLLFALYFKKRKKLAFLFLSFALVFYFLTSNLFAYLI--------SKTFVLKDTEDKG 52
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
IV+LG G + +E + R+++ + LYK+ + II G
Sbjct: 53 IFIVVLGGGVD----EFSNNVEIGKHTLRRLYKALELYKNRPRK------IIVTGGIIDK 102
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
G+ E+++ N LL GV +DI L +++ +TF+N + + +I I LV+S H+K
Sbjct: 103 GVPEALIMKNVLLNFGVPEEDIILGSKARNTFENGKCTFELIG---DVPITLVTSTIHMK 159
Query: 187 RSQLYFQHFGINTKAS----CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
RS F+ F + D+ N+Y IP + FY E G++
Sbjct: 160 RSLFVFRKFFKDVSFVSADVPVDFRNSYLDYIPSANAFYSLCNFSHELFGMIQYKL 215
>gi|296135984|ref|YP_003643226.1| protein of unknown function DUF218 [Thiomonas intermedia K12]
gi|295796106|gb|ADG30896.1| protein of unknown function DUF218 [Thiomonas intermedia K12]
Length = 252
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 11/237 (4%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + F +LF + + L L+ + +
Sbjct: 19 LVFLSLFVTWRSHRFFTRFLTYAITVLFLLASMPLFANLALGALERKATQEKICSPPPPG 78
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ V+L G PT S R+ ++L QH+ T++ISGG
Sbjct: 79 A-LFVVLAGGIDSNPTHAQDFSALKTASLKRLLAAVQLA----QHTPDSTLLISGG--WG 131
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ E+ + ++ G + L+T S TFQ A I LV+SA H+
Sbjct: 132 RTIREANLMGALAVQLGYPASRMILDTTSRTTFQTAVNMRERILQFPVGRRYLVTSADHM 191
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSII----PLSANFYLTELALKEYIGILIAYY 238
R+ + F H ++ A DY + P + T + E +G+L
Sbjct: 192 PRAMMAFAHERVSICAWPVDYEAIPIQALDMLNPQISALDKTTRVVHELLGMLYYRL 248
>gi|229048503|ref|ZP_04194066.1| hypothetical protein bcere0027_44660 [Bacillus cereus AH676]
gi|229112264|ref|ZP_04241804.1| hypothetical protein bcere0018_45060 [Bacillus cereus Rock1-15]
gi|229147372|ref|ZP_04275721.1| hypothetical protein bcere0012_45020 [Bacillus cereus BDRD-ST24]
gi|296505264|ref|YP_003666964.1| hypothetical protein BMB171_C4436 [Bacillus thuringiensis BMB171]
gi|228636054|gb|EEK92535.1| hypothetical protein bcere0012_45020 [Bacillus cereus BDRD-ST24]
gi|228671248|gb|EEL26552.1| hypothetical protein bcere0018_45060 [Bacillus cereus Rock1-15]
gi|228722868|gb|EEL74250.1| hypothetical protein bcere0027_44660 [Bacillus cereus AH676]
gi|296326316|gb|ADH09244.1| hypothetical protein BMB171_C4436 [Bacillus thuringiensis BMB171]
Length = 345
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISIYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ + +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 211 GQGPDEGLPEAEAMQSYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|307130843|ref|YP_003882859.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Dickeya dadantii 3937]
gi|306528372|gb|ADM98302.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Dickeya dadantii 3937]
Length = 259
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 17/239 (7%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
L ++ ++ L + + LL L+ Y N
Sbjct: 25 LALALLWFSRWQKTARILLTGGWLALLLLSLQPVADRLLLPLESRYPAWT---PDFPKVN 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T P P + +R+ E +RL+++ +I +G Q +
Sbjct: 82 YIVVLGGGYTFNPDWP-PSANLINNNLARVTEGIRLWRANP----GARLIFTGAAAQGNP 136
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ + GV DI L Q+ DT + A + +++ LV+SA HL R
Sbjct: 137 VTNASTAARVAESLGVPAQDILLVDQARDTEEEAAGTEALVGKQPFL---LVTSANHLPR 193
Query: 188 SQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +FQ G++ + ++ LN + + P + +E A E +G++ +G
Sbjct: 194 AIRFFQARGLHPIPAPANQLAITSPLNPWERVFPSALYLSHSERAWYEGLGLIWQQMKG 252
>gi|218231692|ref|YP_002369609.1| hypothetical protein BCB4264_A4924 [Bacillus cereus B4264]
gi|218159649|gb|ACK59641.1| conserved domain protein [Bacillus cereus B4264]
Length = 345
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 ILFFIMLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|47565235|ref|ZP_00236278.1| hypothetical protein membrane Spanning protein [Bacillus cereus
G9241]
gi|47558021|gb|EAL16346.1| hypothetical protein membrane Spanning protein [Bacillus cereus
G9241]
Length = 333
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L+ + + IF + ++ F+ + L + + + RP
Sbjct: 96 ILFFIMLPIINPASLVSEHFQFIFAAISLITIYFFVH---LSNFLSAYFLYQFNRP---- 148
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 149 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 198
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ K I
Sbjct: 199 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPNGKYRSI 258
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 259 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 305
>gi|167947128|ref|ZP_02534202.1| probable transmembrane protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 250
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 95/245 (38%), Gaps = 20/245 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ FL + YW +LL I +L + L+ +
Sbjct: 19 PILLGFLGLLYWRFGYGRR----VFVFALLLLWVTSLPITADLLAQGLEI-HPALSEERL 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ I++LG G + S + R+ +L + +I SGG
Sbjct: 74 AESHPEAIIVLGGGRNLDAPEYGG-DTVSARELERLRYAAKLARQ-----TGLPVIPSGG 127
Query: 122 DPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
P G E+ + L E GV I E S T+ NA+ S+ ++K + K ++LV+
Sbjct: 128 APIYFGEPEAKIAARILQDEFGVSVSQI--EAASNTTWDNARLSAQLLKKLGIKQVLLVT 185
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGIL 234
+A H++R+ F+ G+ A+ + + + + +P A+ EY+G+L
Sbjct: 186 NALHMRRAIYAFERNGVEVIAAPTSFIHKTNTRHVWLEGLPNGLAVKNVAYAMHEYVGLL 245
Query: 235 IAYYR 239
Y++
Sbjct: 246 WYYFK 250
>gi|238763350|ref|ZP_04624314.1| hypothetical protein ykris0001_3060 [Yersinia kristensenii ATCC
33638]
gi|238698449|gb|EEP91202.1| hypothetical protein ykris0001_3060 [Yersinia kristensenii ATCC
33638]
Length = 273
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 97/252 (38%), Gaps = 23/252 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK----IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M L ++ +I+ +L R + L+ I + LL L+ Y
Sbjct: 32 MPLPFLLIIMGLALILLWFTRWQKSGKTLFALSWLILLLISLQPVADRLLLPLEKQYA-- 89
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q + IV+LG G T P A S R+ E +RLY++ M T
Sbjct: 90 --TYQGNDPVDYIVVLGGGYTFNPN-WAPSANLFSNSLPRVTEGIRLYRAHPNAKMVFT- 145
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
G + + + GV DI Q DT + A ++++ N
Sbjct: 146 ----GGAGPNSQSSAKTAAQVAESLGVPAADIIALEQPKDTAEEAAAVATLVGNKPFL-- 199
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEY 230
LV+SA HL R+ +F G++ + ++ L+++ IIP + TE A E
Sbjct: 200 -LVTSASHLPRAIKFFTAKGLHPIPAPANQLAITSPLHSWERIIPAATYLGHTERAWYET 258
Query: 231 IGILIAYYRGNR 242
+G++ N+
Sbjct: 259 LGLIWQTLTDNK 270
>gi|26991472|ref|NP_746897.1| hypothetical protein PP_4792 [Pseudomonas putida KT2440]
gi|24986550|gb|AAN70361.1|AE016678_2 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 253
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 85/228 (37%), Gaps = 12/228 (5%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK-DGNIIVLLGNG 75
+ S + + ++ + L+ + + IV+LG G
Sbjct: 30 RRPRLAALCFSVGLGGLWLMSLPLVVQETARVLESEPPLAVSDWAGLASRADAIVVLGAG 89
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+P+ + R+ RL K+ ++ SGG +E+ +
Sbjct: 90 RERGDPAWGGGDQPTATALERMRFAARLAKA-----SGLPVLTSGGLHYGTPPSEARLMA 144
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+L + E S T++NAQ ++ +++ + + ++LV+ A+H++RS+ F+
Sbjct: 145 ERL-HEDFAVEVKWREEASRTTWENAQLTAKVLQPLGFRRVVLVTQAWHMQRSRWSFEQA 203
Query: 196 GINTKASCS-----DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G + D+ + ++P S + + E +G++
Sbjct: 204 GFEVVPAPVGFLGRDHARPFGGLLPESRAMWQSGQLFNEVVGLVGYRV 251
>gi|74311477|ref|YP_309896.1| hypothetical protein SSON_0922 [Shigella sonnei Ss046]
gi|73854954|gb|AAZ87661.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|323165391|gb|EFZ51178.1| hypothetical protein SS53G_4075 [Shigella sonnei 53G]
Length = 259
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTAKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ +N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEELNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|293409297|ref|ZP_06652873.1| hypothetical protein ECEG_00230 [Escherichia coli B354]
gi|291469765|gb|EFF12249.1| hypothetical protein ECEG_00230 [Escherichia coli B354]
Length = 259
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 19/237 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++FQ G+N + ++ LN + IP ++ E +G + + +
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLK 250
>gi|194334537|ref|YP_002016397.1| hypothetical protein Paes_1732 [Prosthecochloris aestuarii DSM 271]
gi|194312355|gb|ACF46750.1| protein of unknown function DUF218 [Prosthecochloris aestuarii DSM
271]
Length = 250
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 95/244 (38%), Gaps = 17/244 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L ++V L + + + L +G + +++ ++ +
Sbjct: 13 LPLGLGIVVVVLGALFRRWW----LVWSGVGLLWVLGMPVTGDWMMRMVEG--VDRRVDV 66
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG T +P +R + R + +++ K + T
Sbjct: 67 ALLEPADAVVVLGGVTVQ---VPGVRYGEWGDAADRFEGGVEVFRGGKAPLLVLTGAKMP 123
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
E + + L GV + +++ + +T A+ ++ + +ILV+
Sbjct: 124 --WAPDARVEGELLRERALLLGVPEESVRVTGRVGNTADEAREVRKLLAGIARPRVILVT 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGIL 234
SA+H++R+ + F+H G+ D+ ++Y +P + +ELA++E IG L
Sbjct: 182 SAFHMRRAAMLFRHAGLRVDEFPVDFRTSFYDRLTVIDFLPCADGLENSELAIREMIGWL 241
Query: 235 IAYY 238
Sbjct: 242 YYLL 245
>gi|116052024|ref|YP_789133.1| hypothetical protein PA14_12270 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115587245|gb|ABJ13260.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 253
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 87/236 (36%), Gaps = 13/236 (5%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGN 67
++W + C + + + + L+ P + +
Sbjct: 22 FFAFWWRTSRPRLARLCGVCGFFGLWLMSMPLSVERMGRWLESEPALLAEDLPGLAQRAD 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G PS + R+ RL + ++ISGG
Sbjct: 82 AIVILGVGRQTNDPAW-GDDAPSLLAAERLRYAARLA-----KTSALPVLISGGLHYGRP 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ + N LL+ + S T++NA S+ ++ + ++LV+ A+H++R
Sbjct: 136 PSEAALMANALLQDFGVPTRWQEGL-SRTTWENATLSAPQLREAGVRRVVLVTQAWHMQR 194
Query: 188 SQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ F+ G + + L + +P + F+ + + L E IG++
Sbjct: 195 ARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLNEAIGLVGYRL 250
>gi|323137866|ref|ZP_08072941.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322396869|gb|EFX99395.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 263
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 10/228 (4%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ F + + + +G + L L+ + RP + +++LG GT
Sbjct: 33 RFARWGRRFAAVSAAALALMAFGPVGQFLGAPLESRFPRPG---DDMPAPDGVIVLG-GT 88
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + R+ + L + + T + + E+
Sbjct: 89 VDEKLSAELGHTAMVDAAERLTAPIALKRRYPNARIVFTGGTAA--LRGSPFTEAEGVKR 146
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ G++ DI E +S +TF+NA F+ +++ G+ +LV+SA H+ RS F+
Sbjct: 147 FWRDVGLDAGDILYEDRSRNTFENAIFTRELVQPKPGERWLLVTSAMHMPRSIGIFRKAN 206
Query: 197 INTKASCSDYLNA--YYSIIPLSA--NFYLTELALKEYIGILIAYYRG 240
A DY + I+P A + E A E++G++ G
Sbjct: 207 FPVIAYPVDYRTNGKFSFILPRFAVKAIGVVEFAAHEWMGLVAYRLTG 254
>gi|162449133|ref|YP_001611500.1| hypothetical protein sce0863 [Sorangium cellulosum 'So ce 56']
gi|161159715|emb|CAN91020.1| hypothetical protein sce0863 [Sorangium cellulosum 'So ce 56']
Length = 253
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 92/229 (40%), Gaps = 12/229 (5%)
Query: 13 WHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ--WKKDGNII 69
W + + L + + + L + + + R L + + ++
Sbjct: 28 WSFRTRGAKIGRALAWSAWLALWLLSTPWLSSALARRI-STVPRDLHAELAGSSPERRVL 86
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+L G S R +R+Y+ +I+SG D +
Sbjct: 87 VILTAGIDADEFGEPAMERQSAAGLERGLAAVRVYREYGFGH----VIVSGKDVRGAPTQ 142
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ + L+E GV R I LET+S DT +NA S+ + + + +++V+SA H+ RS
Sbjct: 143 LASAMADLLVELGVPRKKIILETESRDTRENALHSTRIARGLSADAVVVVTSALHMPRSL 202
Query: 190 LYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGIL 234
F+ G++ + + + ++P S + ++ A+ E +G+L
Sbjct: 203 RMFERAGLDVLPAPVRFQSLPPEGPERLLPESLSLRRSQRAVHELVGLL 251
>gi|206581004|ref|YP_002239432.1| hypothetical protein KPK_3613 [Klebsiella pneumoniae 342]
gi|288936282|ref|YP_003440341.1| hypothetical protein Kvar_3429 [Klebsiella variicola At-22]
gi|290510662|ref|ZP_06550032.1| hypothetical protein HMPREF0485_02432 [Klebsiella sp. 1_1_55]
gi|206570062|gb|ACI11838.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
gi|288890991|gb|ADC59309.1| protein of unknown function DUF218 [Klebsiella variicola At-22]
gi|289777378|gb|EFD85376.1| hypothetical protein HMPREF0485_02432 [Klebsiella sp. 1_1_55]
Length = 259
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 98/242 (40%), Gaps = 18/242 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I + ++ +S LL + + + LLK ++ SY + ++
Sbjct: 23 IGIGIALLWFSRFQRTGKLCVSLGWLLLALLSLQPVADSLLKPIEDSYPTW----RGEQP 78
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ +V+LG G T P A S R+ E +RL+++ +I +G +
Sbjct: 79 VSYVVVLGGGYTWNPE-WAPSSNLINNSLPRLTEGIRLWQANP----GSKMIFTGAAAKT 133
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ ++ + GV R DI + + DT + AQ I +LV+SA HL
Sbjct: 134 NPVSTAEAGARVAESLGVPRSDIIVLDRPKDTEEEAQAVKRAIG---DAPFLLVTSASHL 190
Query: 186 KRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ ++F+H G++ + ++ LN + IP ++ E +G + + +
Sbjct: 191 PRAMIFFRHAGLDPLPAPANQLAVTSPLNPWERAIPSPVWLMHSDRVGYETLGRVWQWLK 250
Query: 240 GN 241
G
Sbjct: 251 GG 252
>gi|228961075|ref|ZP_04122702.1| hypothetical protein bthur0005_45260 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798620|gb|EEM45606.1| hypothetical protein bthur0005_45260 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 345
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|170719815|ref|YP_001747503.1| hypothetical protein PputW619_0629 [Pseudomonas putida W619]
gi|169757818|gb|ACA71134.1| protein of unknown function DUF218 [Pseudomonas putida W619]
Length = 253
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 86/226 (38%), Gaps = 12/226 (5%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTT 77
+ + ++ + L+ + + + IV+LG G
Sbjct: 32 PRLAALCFVLGLGGLWLMSLPLVVQHGARLLETEPPLASGDWARLAQRADAIVVLGAGRE 91
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+PS + R+ RL K+ ++ SGG +E+ + ++
Sbjct: 92 RGDPAWGGEDQPSATALERMRFAARLAKA-----SGLPVLTSGGLHYGTPPSEAQLMADR 146
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L E + E S T++NAQFS+ ++K + ++LV+ A+H++RS+ F+ G
Sbjct: 147 LRE-DFAVEVKWKEEASRTTWENAQFSAQLLKPLGIGRVVLVTQAWHMQRSRWSFEQAGF 205
Query: 198 NTKASCS-----DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ D+ + ++P S + + L E +G+
Sbjct: 206 EVIPAPMGFLGRDHARPFAGLLPESRAMWQSGQLLNEAVGLAGYRL 251
>gi|34496963|ref|NP_901178.1| transmembrane protein [Chromobacterium violaceum ATCC 12472]
gi|34102819|gb|AAQ59183.1| probable transmembrane protein [Chromobacterium violaceum ATCC
12472]
Length = 254
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 88/236 (37%), Gaps = 18/236 (7%)
Query: 10 VSYWHLLCQSI--RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ +L + ++ + L + L + ++ P + P +
Sbjct: 28 IVAGAMLVRRWQHAGRVLLALGVALTYMLSIPQTAIWLAQGVER---YPPIRPADLAAAD 84
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G P PS + +R+ L + + ++ G G
Sbjct: 85 AIVVLGGGKRPAPEF--GGNAPSSDTLARLRYAAYLARQSGKP------VLVTGGSPLGG 136
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E V + L + R +E +S T NA+ S+ M+K I LVS +HL R
Sbjct: 137 EPEGKVMASALHDDYGIRAR-WVEDRSDTTLDNARLSAEMLKAAGATRIALVSQGWHLGR 195
Query: 188 SQLYFQHFGINTKASCSDYL----NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +FQ G+ + + ++ A+ +P + L+EYIG+L R
Sbjct: 196 AVPFFQSQGLQVSPAPTGFVRYEGPAFTRYLPSGKAMGDCHVLLREYIGLLYYRLR 251
>gi|318042858|ref|ZP_07974814.1| hypothetical protein SCB01_14194 [Synechococcus sp. CB0101]
Length = 268
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 88/239 (36%), Gaps = 18/239 (7%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + L + L+ L+ L+P+ + +V+LG G
Sbjct: 32 RSRPRWGMGLSGAGIGLIWLFAMPLTSRQLIWGLEEQ--AAALTPRQIPRADAVVVLGGG 89
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P + + + R+ +RL + K + + E++
Sbjct: 90 LR--PALAPRQAVEVAEGGDRLLTGLRLLRQNKAPVLLTSGGQVTFTAGDPAPPEALSAQ 147
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-QH 194
+E G+ + I +S T + A+ + + + ++LV+SA+H+ RS F Q
Sbjct: 148 ALAIELGMPPERILTNPRSRTTAEEARDIGQLARKRGWRTVLLVTSAFHMPRSLATFQQR 207
Query: 195 FGINTKASCSDYLNAYY-------------SIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ DY ++P + +L+ +ALKE++G+ + RG
Sbjct: 208 SGLRVIPVACDYQLPTRARYGKPTAGSVLKGLVPEAEALHLSSVALKEHLGLALYRLRG 266
>gi|322514156|ref|ZP_08067222.1| hypothetical protein HMPREF0027_0974 [Actinobacillus ureae ATCC
25976]
gi|322119969|gb|EFX91970.1| hypothetical protein HMPREF0027_0974 [Actinobacillus ureae ATCC
25976]
Length = 248
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 95/243 (39%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + + L++ + F+ L+ +
Sbjct: 19 LILWIFSL--FLHKLHFKKSSYFCTLLGITILYICSTPYFSHQLIQAVTFT---QKLTIE 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + R+ L+K I+++GG
Sbjct: 74 DYKKAQAIVVLGGGLR-DSNELFGNYAIAAPPLERMRYAAYLHKQ-----TGLPILVTGG 127
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ I+ V +E +S T +NA FS ++ + ++I+LV++
Sbjct: 128 SPEGREPEAKIMAQELNDFFHVPVT--WVEEKSNVTEENATFSKPILMHAGIQHIVLVTN 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 186 QWHMKRAKMLFEREGFNVLAASTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 245
Query: 238 YRG 240
G
Sbjct: 246 LIG 248
>gi|116074507|ref|ZP_01471769.1| hypothetical protein RS9916_38692 [Synechococcus sp. RS9916]
gi|116069812|gb|EAU75564.1| hypothetical protein RS9916_38692 [Synechococcus sp. RS9916]
Length = 261
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 93/257 (36%), Gaps = 28/257 (10%)
Query: 1 MLLSWI-FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ L+ + L+ R+ + + ++L GI+ +L + L+ +QR L+S
Sbjct: 9 LPLAMLPLGFSLILLLVGLIGRRRWPVIVAVVLLWVSSLGIVSQLLWRWLESPWQRQLVS 68
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ IV+L P + + R + L+++ K + T S
Sbjct: 69 AAS--KADAIVVLSGARHPAPGASQVS---EWHDPDRFLTGVDLFRAGKAPRLLFTGGAS 123
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM----------IK 169
E +Y + GV + ++T + A + +
Sbjct: 124 PFL--PGQPPEGSLYLKEAAALGVPTAAMASTPPVVNTAEEAVAIRRLLMAGSGSQLSDQ 181
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL----------NAYYSIIPLSAN 219
+ IILV+SA+H++R+Q F+ G+ + D+ +P +
Sbjct: 182 DASSGRIILVTSAFHMRRAQRLFERQGLVVQPFPVDFQARGRWAGAVWTDPTQWLPTARA 241
Query: 220 FYLTELALKEYIGILIA 236
+ A++E +G ++
Sbjct: 242 LDDSSRAMRELLGRVVY 258
>gi|296103078|ref|YP_003613224.1| hypothetical protein ECL_02734 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057537|gb|ADF62275.1| hypothetical protein ECL_02734 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 259
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 89/235 (37%), Gaps = 19/235 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
W Q K ++ L+ + + LL+ ++ +Y Q + IV+
Sbjct: 30 VWFSRFQKSGKT-LITFGWLVLLLLSLQPVADKLLRPIENTYPTW----QGNQKVEYIVV 84
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G T P A S R+ E +RL+ + +I +G + + ++ +
Sbjct: 85 LGGGYTWDPN-WAPSSNLINNSLPRLNEGIRLWLANP----GSKMIFTGAPAKTNPVSTA 139
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
GV R I DT + A I +LV+SA HL R+ ++
Sbjct: 140 EAGARVAESLGVPRSAIITLDSPKDTEEEAAAVKQAIG---DVPFLLVTSASHLPRAMIF 196
Query: 192 FQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
F+ G++ + ++ LN + +IP ++ E +G + + +G
Sbjct: 197 FEKQGLHPLPAPANQMAINAPLNPWERVIPSPMWLMHSDRVGYETLGRIWQWLKG 251
>gi|229118290|ref|ZP_04247646.1| hypothetical protein bcere0017_45590 [Bacillus cereus Rock1-3]
gi|228665120|gb|EEL20606.1| hypothetical protein bcere0017_45590 [Bacillus cereus Rock1-3]
Length = 345
Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|148549869|ref|YP_001269971.1| hypothetical protein Pput_4667 [Pseudomonas putida F1]
gi|148513927|gb|ABQ80787.1| protein of unknown function DUF218 [Pseudomonas putida F1]
Length = 253
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 86/228 (37%), Gaps = 12/228 (5%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD-GNIIVLLGNG 75
+ S + + ++ + L+ + + + IV+LG G
Sbjct: 30 RRPRLAALCFSVGLGGLWLMSLPLVVQETARVLESEPPLAVSDWAGLANRADAIVVLGAG 89
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+P+ + R+ RL K+ ++ SGG +E+ +
Sbjct: 90 RERGDPAWGGSDQPTATALERMRFAARLAKA-----SGLPVLTSGGLHYGTPPSEARLMA 144
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+L + E S T++NAQ ++ +++ + + ++LV+ A+H++RS+ F+
Sbjct: 145 ERL-HEDFAVEVKWREEASRTTWENAQLTAKVLQPLGFRRVVLVTQAWHMQRSRWSFEMA 203
Query: 196 GINTKASCS-----DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G + D+ + ++P S + + E +G++
Sbjct: 204 GFEVVPAPVGFLGRDHARPFGGLLPESRAMWQSGQLFNEVVGLVGYRV 251
>gi|313500771|gb|ADR62137.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 253
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/228 (15%), Positives = 85/228 (37%), Gaps = 12/228 (5%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD-GNIIVLLGNG 75
+ + + + ++ + L+ + + IV+LG G
Sbjct: 30 RRPRLAALCFTVGLGGLWLMSLPLVVQETARVLESEPPLAVSDWAGLARRADAIVVLGAG 89
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+P+ + R+ RL K+ ++ SGG +E+ +
Sbjct: 90 RERGDPAWGGGDQPTATALERMRFAARLAKA-----SGLPVLTSGGLHYGTPPSEARLMA 144
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+L + E S T++NAQ ++ +++ + + ++LV+ A+H++RS+ F+
Sbjct: 145 ERL-HEDFAVEVKWREEASRTTWENAQLTAKVLQPLGFRRVVLVTQAWHMQRSRWSFEQA 203
Query: 196 GINTKASCS-----DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G + D+ + ++P S + + E +G++
Sbjct: 204 GFEVVPAPVGFLGRDHARPFGGLLPESRAMWQSGQLFNEVVGLMGYRV 251
>gi|90424829|ref|YP_533199.1| hypothetical protein RPC_3338 [Rhodopseudomonas palustris BisB18]
gi|90106843|gb|ABD88880.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB18]
Length = 264
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 101/245 (41%), Gaps = 15/245 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ I ++ + + ++ + L G+ + +LL L +
Sbjct: 19 IVMICVLGAVLLPTRWRRGGLRILTLGLALLLIAGFSPLGNVLLLSLTERFPAW---QAD 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +++LG + +E S RI ++L + I+ SGG
Sbjct: 76 GRAPDGVIVLGGSIDAEVSTARNALELDA-SAERIVVMLQLARRFP----DARIVFSGGS 130
Query: 123 PQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ +AE+ + L G+ + I LE +S T +NA F+ +++ G+ +LV+
Sbjct: 131 ANLLQAPVAEAPIAGRLLHSFGIAPERIVLEDRSRTTAENAAFTRALVTPAAGERWLLVT 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILI 235
SA+H+ RS F+ G + +A D+ + LSA T++A+ E++G++
Sbjct: 191 SAFHMPRSIAAFRAVGFDVEAYPVDWRTRGWIDAAMPFDRLSAGLARTDVAVHEWVGLIA 250
Query: 236 AYYRG 240
G
Sbjct: 251 YRLAG 255
>gi|218906031|ref|YP_002453865.1| hypothetical protein BCAH820_4919 [Bacillus cereus AH820]
gi|218540175|gb|ACK92573.1| conserved domain protein [Bacillus cereus AH820]
Length = 344
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 107 MLFCMLLPIINPASLVSSHFQPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYKSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|251789903|ref|YP_003004624.1| hypothetical protein Dd1591_2303 [Dickeya zeae Ech1591]
gi|247538524|gb|ACT07145.1| protein of unknown function DUF218 [Dickeya zeae Ech1591]
Length = 258
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 91/239 (38%), Gaps = 17/239 (7%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
L ++ ++ L + + LL L+ Y N
Sbjct: 25 LALALLWFSRWQKTARALLTGGWLALLLLSLQPVADKLLLPLESHYPTWT---PEFPKVN 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T P P S +R+ E +RL+++ +I +G + +
Sbjct: 82 YIVVLGGGYTFNPDWP-PSANLINNSLARVTEGIRLWRANP----GAKLIFTGAAARSNP 136
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ + GV DI L Q+ DT + A + ++I LV+SA HL R
Sbjct: 137 VTSASTSARVAESLGVPAQDILLVDQARDTEEEAAGTEALIGKQPFL---LVTSASHLPR 193
Query: 188 SQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +FQ G++ + ++ LN + + P + +E A E +G++ +G
Sbjct: 194 AIRFFQARGLHPIPAPANQLAMTSPLNPWERVFPSALYLSHSERAWYEGLGLIWQQMKG 252
>gi|104783752|ref|YP_610250.1| hypothetical protein PSEEN4811 [Pseudomonas entomophila L48]
gi|95112739|emb|CAK17467.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 253
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 90/221 (40%), Gaps = 12/221 (5%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK-DGNIIVLLGNGTTIIPTI 82
F + + + ++ + L+ L S + + IV+LG G
Sbjct: 37 FCFTVGLGGVWLMSLPLVVEQAARALETEPPLELASWKDLATKADAIVVLGAGRERGDPA 96
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+P++ + R+ +L K+ ++ SGG +E+ + ++L E+
Sbjct: 97 WGGSDQPTYVALERMRFAAQLAKA-----SGLPVLTSGGLHYGTPPSEAQLMADRL-EAD 150
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
E S T++NA F++ +++ + + +++V+ A+H++RS+ F+ G +
Sbjct: 151 FGVRVTWKEEASRTTWENADFTAKLLQPLGIRRVVVVTQAWHMQRSRWSFERAGFEVVPA 210
Query: 203 CSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+L + ++P + + L E +G+L
Sbjct: 211 PVGFLGREHARPFGGLLPEGRAMWQSGQLLNEAVGLLGYRV 251
>gi|150020778|ref|YP_001306132.1| hypothetical protein Tmel_0886 [Thermosipho melanesiensis BI429]
gi|149793299|gb|ABR30747.1| protein of unknown function DUF218 [Thermosipho melanesiensis
BI429]
Length = 236
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 26/239 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L +F I+S + L+ + FF+ + L+ I + L ++ +
Sbjct: 17 ILILLFFIISIYFLIKKRHIWRFFIILSITLYVI--STPIFNFFISKL------FIVDTK 68
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
IV+LG G A IE + R+ + +YK + I+ G
Sbjct: 69 PIPKDGTIVVLGGGIVN----YANNIEIGTHTLKRLLKGWEIYKEKRLK------IVVAG 118
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G+ E+ V + L++ GV +DDI E S T +NA+ S + K NIILV+S
Sbjct: 119 GVIGDGIREADVMKDFLIKLGVSKDDIITENTSRTTKENAKNVSKITK---DPNIILVTS 175
Query: 182 AYHLKRSQLYFQHFG----INTKA-SCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
H+KR+++ F+ + I D + +P Y L E++GIL
Sbjct: 176 FLHMKRAKMLFEKYTQSNIIPVVCDYPIDLRKNFLDFLPSPRGIYTFSLITHEFLGILK 234
>gi|163749752|ref|ZP_02156998.1| hypothetical protein KT99_15255 [Shewanella benthica KT99]
gi|161330565|gb|EDQ01523.1| hypothetical protein KT99_15255 [Shewanella benthica KT99]
Length = 247
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 99/224 (44%), Gaps = 12/224 (5%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R F ++ +++ F+ + +L L+ Y ++ Q G ++++LG+G
Sbjct: 31 RNRKRVRFVLAVAVVILVFLTSSVGSNLLTASLENQY---RVNNQAIDAGCLVMVLGSGH 87
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
A+ + S + R+ E +R Y+ K C +I+SG + +
Sbjct: 88 DDEIPGGAVH-QLSATALVRLTEGVRQYQLGK----DCILIVSGWGGSASKTPHAKIMAE 142
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ G+ +D I + DT + AQ+ + + + LV+SA H+ RS FQ G
Sbjct: 143 AAMQLGIPKDRIITFPLAKDTIEEAQYLKWDVGSYPFR---LVTSATHMPRSMAIFQGQG 199
Query: 197 INTKASCSDYLNAY-YSIIPLSANFYLTELALKEYIGILIAYYR 239
++ +A+ +D++ Y + N ++ A+ EY+G L +
Sbjct: 200 LSPEAAPTDFITRQGYWWQLDANNLLSSQRAIHEYVGRLWLTLK 243
>gi|49481369|ref|YP_038846.1| hypothetical protein BT9727_4534 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49332925|gb|AAT63571.1| conserved hypothetical protein, possible membrane spanning protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 344
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 107 MLFCMLLPIINPASLVSSHFQPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ +
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|322515196|ref|ZP_08068195.1| hypothetical protein HMPREF0027_1947 [Actinobacillus ureae ATCC
25976]
gi|322118806|gb|EFX91007.1| hypothetical protein HMPREF0027_1947 [Actinobacillus ureae ATCC
25976]
Length = 247
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 92/240 (38%), Gaps = 20/240 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ ++++ F + +++ I ++ T L L L+
Sbjct: 18 IALLWILSLILARFHYKKLSRFLAAFGIIVLYLISTPLVATKLSDSL---VTNDNLTLDD 74
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+L G + I + R+ L I+++
Sbjct: 75 YRSAQAIVVLSGGMRDSQEL-FGSIATGDSTLDRMRYGAFL-----TKETSLPILVT--G 126
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+G +E+ + + E + LE ++ T +NAQFS M+ I+LV++
Sbjct: 127 SSPNGNSEAAMMAKEF-EQFFQVKAKWLEEKAKTTKENAQFSREMLAKEGINKIVLVTNQ 185
Query: 183 YHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+H+KR+++ F+ G + DY N Y+ +P + ++LKE++G L
Sbjct: 186 WHMKRAKMLFEKQGFEVLPASTGAGVTPEDYYN-YFYYLPQAGALSSVMISLKEWMGYLK 244
>gi|146311096|ref|YP_001176170.1| hypothetical protein Ent638_1439 [Enterobacter sp. 638]
gi|145317972|gb|ABP60119.1| protein of unknown function DUF218 [Enterobacter sp. 638]
Length = 259
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 19/234 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K M+ L+ + + LL+ ++ Y Q KK + IV+L
Sbjct: 31 WLTRFQKTAKTV-MTAAWLMLLLLSLQPVADGLLRPIEDKYPTW----QGKKKVDYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T P A S R+ E +RL+ + +I +G + + ++ +
Sbjct: 86 GGGYTWDPN-WAPSSNLINNSLPRLNEGIRLWLANP----GSKMIFTGAPAKTNPVSTAE 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
GV R I DT + A I N +LV+SA HL R+ ++F
Sbjct: 141 AGARVAESLGVPRSAIITLDSPKDTEEEAAAVKQAIGN---APFLLVTSASHLPRAMIFF 197
Query: 193 QHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H G++ + ++ LN + IP ++ E +G L + +G
Sbjct: 198 EHAGLHPLPAPANQLAVDAPLNPWERAIPSPVWLMHSDRVGYETLGRLWQWLKG 251
>gi|312171960|emb|CBX80217.1| Uncharacterized protein ycbC [Erwinia amylovora ATCC BAA-2158]
Length = 262
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 19/233 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K +S L + + LL L+ Y + + IV+L
Sbjct: 31 WFSRWQKSAKT-LISVAWLFLLLLSLQPVADRLLAPLEDRYPTWH----NQHPLDYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T A S R+ E +R++++ Q +I +GG Q + ++ +
Sbjct: 86 GGGYTWNL-QWAPSSNMLNNSLPRLAEGIRIWRANPQ----AKLIFTGGKAQHNPMSSAA 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V + GV I + + DT Q A + ++ N LV+SA HL R+ +F
Sbjct: 141 VTASVAQSLGVPAAAIIILDKPRDTEQEAHEVAKIVHNQPFA---LVTSANHLPRAIRFF 197
Query: 193 QHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
Q+ G+ + ++ LN + ++P S +E AL E IG L + +
Sbjct: 198 QYQGLQPWPAPANQLAVASPLNVWERVLPSSFWLGHSERALYENIGRLWQWLK 250
>gi|327398427|ref|YP_004339296.1| hypothetical protein Hipma_0260 [Hippea maritima DSM 10411]
gi|327181056|gb|AEA33237.1| protein of unknown function DUF218 [Hippea maritima DSM 10411]
Length = 258
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 25/240 (10%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
LI+ L + R F +S F+L F I +LL +L+
Sbjct: 30 VLILITASFLVKRFRWFFMVSAFVLWF--ISTTPGKNLLLSYLED-------IKTSSDTA 80
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ +V+L G+ I +++ R+ + L K + +I SGG + +
Sbjct: 81 SAVVVLSGGSNPYDRIKTY-----PEAFKRLMYGILLAKRY-----NIPLIFSGGGLKYN 130
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHL 185
A++ + + + I E +SL+T+QNA+++S + M+ K +I +V+SAYH
Sbjct: 131 DSAQAKNDIEIIAKICNCKIKIYFENKSLNTYQNAKYTSKFFEKMKIKKDIFIVTSAYHQ 190
Query: 186 KRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
KR+ + F++FG + ++ ++ +P NFY + A+ EYIGI Y RG
Sbjct: 191 KRANILFRYFGFRVHSRPVNFFKERGSYVFWDFLPQMGNFYKSYKAIHEYIGIFSLYLRG 250
>gi|304436974|ref|ZP_07396937.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369925|gb|EFM23587.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 252
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L+ + L V W QS R + + + G + L+ L+ +Y P
Sbjct: 19 VLAMLGLAVYLWKRQHQS-RAAVLLCALAAMLYLLSIGAVSDRLMGELERTYPVPE---- 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
G++I++LG G + SR+ RL+ H I++SGG
Sbjct: 74 -APQGDVIIMLGGGAIADVQDVDGTGMLAQSPSSRLLAVYRLH-----LRTHLPILLSGG 127
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L GV D I +ET+SL T QNA++++ +++ + ILV+S
Sbjct: 128 QVFSDTGSEAEIARRVLRSLGVPDDMIYVETRSLTTGQNARYTAEILRREGFVHPILVTS 187
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTELALKEYIGILI 235
A+HL R+ L F+ GI +D+ + P + Y + +E + ++
Sbjct: 188 AFHLPRAVLNFEKQGITVTPYPTDFWVSGDPQLYLIKFAPNAGVLYTNTVYFQEKLRTIV 247
Query: 236 AYY 238
Y
Sbjct: 248 TRY 250
>gi|292487838|ref|YP_003530713.1| hypothetical protein EAMY_1355 [Erwinia amylovora CFBP1430]
gi|292899065|ref|YP_003538434.1| membrane protein [Erwinia amylovora ATCC 49946]
gi|291198913|emb|CBJ46023.1| putative membrane protein [Erwinia amylovora ATCC 49946]
gi|291553260|emb|CBA20305.1| Uncharacterized protein ycbC [Erwinia amylovora CFBP1430]
Length = 262
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 19/233 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K +S L + + LL L+ Y + + IV+L
Sbjct: 31 WFSRWQKSAKT-LISVAWLFLLLLSLQPVADRLLAPLEHRYPTWH----NQHPLDYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T A S R+ E +R++++ Q +I +GG Q + ++ +
Sbjct: 86 GGGYTWNL-QWAPSSNMLNNSLPRLAEGIRIWRANPQ----AKLIFTGGKAQHNPMSSAA 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V + GV I + + DT Q A + ++ N LV+SA HL R+ +F
Sbjct: 141 VTASVAQSLGVPAAAIIILDKPRDTEQEAHEVAKIVHNQPFA---LVTSANHLPRAIRFF 197
Query: 193 QHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
Q+ G+ + ++ LN + ++P S +E AL E IG L + +
Sbjct: 198 QYQGLQPWPAPANQLAVASPLNVWERVLPSSFWLGHSERALYENIGRLWQWLK 250
>gi|257465061|ref|ZP_05629432.1| hypothetical protein AM202_01030 [Actinobacillus minor 202]
gi|257450721|gb|EEV24764.1| hypothetical protein AM202_01030 [Actinobacillus minor 202]
Length = 247
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 18/239 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ I+++ ++ L + L + T+L L + L+ Q
Sbjct: 19 IAVIWILSLIFYRLHYKKISRSLTILGIALLYLFSTPFMATLLSNSLVKEH---TLTLQD 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G + ++ + R+ L+K + I++ G
Sbjct: 76 YRQAQAIVVLGGGLRDSNELY-GKLTVTNNELERMRYAAYLHKETQLP------ILATGS 128
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
I+ V I E+Q+ T +NA ++ +++ IILV+
Sbjct: 129 APNGNSEAEIIAKEFKQFFDVPTKWI--ESQAKTTKENALYTKDILEKEGINTIILVTQN 186
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTELALKEYIGILI 235
+H++R++L F+ G + + Y +P S L LKE++G
Sbjct: 187 WHMQRAKLLFEQQGFHVLPAGVGYGKTPSEYINFMYFVPQSGAMDNIMLFLKEWLGYWK 245
>gi|152969504|ref|YP_001334613.1| hypothetical protein KPN_00947 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893976|ref|YP_002918710.1| hypothetical protein KP1_1920 [Klebsiella pneumoniae NTUH-K2044]
gi|262040981|ref|ZP_06014203.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150954353|gb|ABR76383.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238546292|dbj|BAH62643.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041675|gb|EEW42724.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 259
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 18/241 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I + ++ +S LL + + + LLK ++ +Y + ++
Sbjct: 23 IGIGIALLWFSRFQRTGKLCVSLGWLLLTLLSLQPVADSLLKPIEDTYPTW----RGEQP 78
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
N +V+LG G T P A S R+ E +RL+++ +I +G +
Sbjct: 79 VNYVVVLGGGYTWNPE-WAPSSNLINNSLPRLTEGIRLWQANP----GSKMIFTGAAAKT 133
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ ++ + GV R DI + + DT + A I +LV+SA HL
Sbjct: 134 NPVSTAEAGARVAESLGVPRSDIIVLDRPKDTEEEALAVKRAIG---DAPFLLVTSASHL 190
Query: 186 KRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ ++F+H G++ + ++ LN + IP ++ E +G + + +
Sbjct: 191 PRAMIFFRHAGLDPLPAPANQLAVTSPLNPWERAIPSPVWLMHSDRVGYETLGRVWQWLK 250
Query: 240 G 240
G
Sbjct: 251 G 251
>gi|228988059|ref|ZP_04148160.1| hypothetical protein bthur0001_47210 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228771693|gb|EEM20158.1| hypothetical protein bthur0001_47210 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 344
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L+ + + IF + ++ F+ + L + + + RP
Sbjct: 107 ILFFIMLPIINPASLVSEHFQFIFAAISLITIYFFVH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ K I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKDIMDSLKPDGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|260223391|emb|CBA33910.1| hypothetical protein Csp_B21400 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 256
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 77/208 (37%), Gaps = 6/208 (2%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
IGW +P +L+++L+ Y + +V+LG GT +
Sbjct: 50 IGWQPLPELLIRNLESRYPEIAPAADLSVYAG-VVVLGGGTAAGRLQQSHLQPLINDGGE 108
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + L + T P G +E+ + ++ E +S
Sbjct: 109 RLAVSAALALRHPALPLVYTGGEGD--PAGGGPSEAARARQFYESFRIPAVQVRYEAESR 166
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN---AYYS 212
+T++NA ++ + +L++SA+H+ RS F+ G N A DY ++
Sbjct: 167 NTYENAVLTAKLPGVNPQDRWLLMTSAWHMPRSMATFEKAGWNVTAYPVDYRAEDVTVWT 226
Query: 213 IIPLSANFYLTELALKEYIGILIAYYRG 240
L +L L E +G+ G
Sbjct: 227 RYSLLGGVSDWQLVLNELVGLAAYRLTG 254
>gi|152977155|ref|YP_001376672.1| hypothetical protein Bcer98_3467 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152025907|gb|ABS23677.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 345
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL + I L + IF ++L+ FI +L + + RP
Sbjct: 108 ILLWILLAIFDPASLFSSHFQPIFGAISLIILYFFIHVL---NFFTAYLLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --KYNQDFIIVLGSGLIRDKVPPLL--------ASRIHKAIDFYHKQAAVASPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G L E+ +E G+ + E +S++T+QN FS ++ K N I
Sbjct: 211 GQGPDENLPEAEAMQKYAVEQGIPIEHTVQENRSVNTYQNMLFSKQIMDSLKPDGNYNSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 271 FATNNFHLFRAGLYAKQAGLNSQGIGS-----------KTAFYYWPNALIREYIAIVV 317
>gi|229105438|ref|ZP_04236081.1| hypothetical protein bcere0019_45700 [Bacillus cereus Rock3-28]
gi|228677994|gb|EEL32228.1| hypothetical protein bcere0019_45700 [Bacillus cereus Rock3-28]
Length = 345
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G GL E+ N +E G+ E +S++T+QN FS ++ +++ I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLKHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 317
>gi|330887933|gb|EGH20594.1| hypothetical protein PSYMO_03468 [Pseudomonas syringae pv. mori
str. 301020]
Length = 256
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPHLATAFFAFGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARL-----SKTSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSLHDDFGVTARWQEGL-SRTTWENATMTAAVLQPLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|295096380|emb|CBK85470.1| Uncharacterized conserved protein [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 259
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 88/234 (37%), Gaps = 19/234 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K ++ L + + LL+ ++ +Y Q + IV+L
Sbjct: 31 WFSRFQKSGK-SLVTVGWLALLLLSLQPVADGLLRPIENTYPTW----QGNQKVGYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T P A S R+ E +RL+ + +I +G + + ++ +
Sbjct: 86 GGGYTWDPN-WAPSSNLINNSLPRLNEGIRLWLANP----GSKMIFTGAAAKTNPVSTAE 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
GV R I DT + A I +LV+SA HL R+ ++F
Sbjct: 141 AGARVAESLGVPRSAIITLDSPKDTEEEAAAVKQAIG---DVPFLLVTSASHLPRAMIFF 197
Query: 193 QHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ G++ + ++ LN + IIP ++ E +G L + +G
Sbjct: 198 EKQGLHPLPAPANQMAIDAPLNPWERIIPSPVWLMHSDRVGYETLGRLWQWLKG 251
>gi|152994702|ref|YP_001339537.1| hypothetical protein Mmwyl1_0668 [Marinomonas sp. MWYL1]
gi|150835626|gb|ABR69602.1| protein of unknown function DUF218 [Marinomonas sp. MWYL1]
Length = 255
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 85/207 (41%), Gaps = 14/207 (6%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
W + L+ ++ Y ++ + +++LG+G + P + +
Sbjct: 62 LTSWNPVANSLIATVEHDYPVF----DVQQPVDAVIVLGSGHKDLSNTPTVM-ALGNSAL 116
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ E +R+ K+ + G + + V +E GV+ D IK +
Sbjct: 117 FRLEEGLRILKANPNAQ-----LFVSGYSGQMTEPHAEVMRRAAIELGVQPDRIKAFPLA 171
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSI 213
+ ++SM ++GKN LV+ A HLKR+ ++F+ GI + + YL +
Sbjct: 172 K---DTEEEANSMKPYLEGKNAALVTEASHLKRASIFFEQAGIKIIPAPAMYLGSEKSDW 228
Query: 214 IPLSANFYLTELALKEYIGILIAYYRG 240
+ Y ++ A E++G + +G
Sbjct: 229 QIDATAAYKSQRAFYEWLGRTWQWIKG 255
>gi|224825882|ref|ZP_03698986.1| protein of unknown function DUF218 [Lutiella nitroferrum 2002]
gi|224602106|gb|EEG08285.1| protein of unknown function DUF218 [Lutiella nitroferrum 2002]
Length = 267
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 85/225 (37%), Gaps = 16/225 (7%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
++ + L + + L + L+ PL++ ++ IV+LG G
Sbjct: 40 PRAGSVVVALALGLSYALATPQMAMWLNRSLERF---PLVALSQVRETGAIVVLGGGKKP 96
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P R EPS + R+ L ++ G G AE+ V L
Sbjct: 97 APE--YGRNEPSADTLMRLRYAAYLA------RHSGRPVLVSGGAPLGGEAEAPVMARTL 148
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ + +E S TF NA+ S+ ++K ++I LVS +HL R+ F+ G+
Sbjct: 149 VSDYGVQPR-WVEQGSDTTFDNARLSAQLLKADGVRSITLVSQGWHLARAVPLFEEQGLK 207
Query: 199 TKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +P T AL+E++G L R
Sbjct: 208 VLPAPTGLVRYDGGGVMWYLPSGRAMQETHAALREWVGRLYYAVR 252
>gi|330013999|ref|ZP_08307835.1| hypothetical protein HMPREF9538_05555 [Klebsiella sp. MS 92-3]
gi|328533292|gb|EGF60043.1| hypothetical protein HMPREF9538_05555 [Klebsiella sp. MS 92-3]
Length = 259
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 18/241 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I + ++ +S LL + + + LLK ++ +Y + ++
Sbjct: 23 IGIGIALLWFSRFQRTGKLCVSLGWLLLTLLSLQPVADSLLKPIEDTYPTW----RGEQP 78
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
N +V+LG G T P A S R+ E +RL+++ +I +G +
Sbjct: 79 VNYVVVLGGGYTWNPE-WAPSSNLINNSLPRLTEGIRLWQANP----GSKMIFTGAAAKT 133
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ ++ + GV R DI + + DT + A I +LV+SA HL
Sbjct: 134 NPVSTAEAGARVAESLGVPRSDIIVLGRPKDTEEEALAVKRAIG---DAPFLLVTSASHL 190
Query: 186 KRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ ++F+H G++ + ++ LN + IP ++ E +G + + +
Sbjct: 191 PRAMIFFRHAGLDPLPAPANQLAVTSPLNPWERAIPSPVWLMHSDRVGYETLGRVWQWLK 250
Query: 240 G 240
G
Sbjct: 251 G 251
>gi|240948368|ref|ZP_04752754.1| hypothetical protein AM305_05929 [Actinobacillus minor NM305]
gi|240297407|gb|EER47948.1| hypothetical protein AM305_05929 [Actinobacillus minor NM305]
Length = 247
Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 18/239 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ I+++ ++ L + L + T+L L + L+ Q
Sbjct: 19 IAVIWILSLIFYRLHYKKISRSLTILGITLLYLFSTPFMATLLSNSL---VKENTLTLQD 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G + ++ + R+ L+K + I++ G
Sbjct: 76 YRQAQAIVVLGGGLRDSNELY-GKLTVTNNELERMRYAAYLHKETQLP------ILATGS 128
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
I+ V I E+Q+ T +NA ++ ++K I+LV+
Sbjct: 129 APNGNSEAEIIAKEFKQFFDVPTKWI--ESQAKTTKENALYTKDILKKEGINTIVLVTQN 186
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTELALKEYIGILI 235
+H++R++L F+ G + + Y +P S L LKE++G
Sbjct: 187 WHMQRAKLLFEQQGFHVLPAGVGYGKTPSEYINFMYFVPQSGAMDNIMLFLKEWLGYWK 245
>gi|300777919|ref|ZP_07087777.1| protein of hypothetical function DUF218 [Chryseobacterium gleum
ATCC 35910]
gi|300503429|gb|EFK34569.1| protein of hypothetical function DUF218 [Chryseobacterium gleum
ATCC 35910]
Length = 216
Score = 98.3 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+L+ FIG G + ++ +LQ SY +IV+LG G I
Sbjct: 1 MGIFAVLMIIFIGNGFLGKLISGYLQKSYLNTSEIRNSGSQHPVIVVLGGGVVNIDHTEK 60
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
SYSR+ +LY + K ++ C I++SG K ++E+ ++ + GV
Sbjct: 61 ----LHTMSYSRMVTAYQLYHAYKTNNQSCKILVSGKG--KGSMSEAELFRENFKKMGVA 114
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DI E +S++T++NA++SS ++K M +I LV+S +H+KRS FQ FG++ + S
Sbjct: 115 DADIIKEDKSMNTYENAKYSSRILKQMAPSSIDLVTSGFHMKRSVALFQTFGLHPVPNAS 174
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGIL 234
D++ ++IP S N T + LKE +GI
Sbjct: 175 DFITTEITLIPNSYNAAFTFVMLKEVLGIW 204
>gi|91793951|ref|YP_563602.1| hypothetical protein Sden_2600 [Shewanella denitrificans OS217]
gi|91715953|gb|ABE55879.1| protein of unknown function DUF218 [Shewanella denitrificans OS217]
Length = 264
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ ML + I +L L+ Y + Q + +++LG+G ++ + A
Sbjct: 49 LVITMLAIVLLSQLQISHLLGGSLEQRYSA---NHQAIQGECTVMVLGSGHSLTLGLSA- 104
Query: 86 RIEPSFQSYSRIFETMR---LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+ S + +R+ E +R L + + C +++SG + + G + + V E G
Sbjct: 105 TQQLSPTALARLVEGIRQLKLSEPTTEAPHSCRLVVSGWNGGREGASHAEVMALAAQELG 164
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V + I ++ DT + ++ LV+SA H+ R+ + G+N +A+
Sbjct: 165 VSKAQITTFPEARDTIEELMSMKQIMGE---APFRLVTSATHMSRAMRIARSLGLNPEAA 221
Query: 203 CSDYLNA-YYSIIPLSANFYLTELALKEYIGILI 235
S++L Y + N L++ +L EY+G+L
Sbjct: 222 PSNFLAGDGYWWRLSADNLILSQASLHEYVGMLW 255
>gi|217077219|ref|YP_002334937.1| hypothetical protein THA_1144 [Thermosipho africanus TCF52B]
gi|217037074|gb|ACJ75596.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
Length = 241
Score = 98.3 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 99/239 (41%), Gaps = 21/239 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L F +++ ++ L + FF+ + +F I L K
Sbjct: 17 ILIAFFSLLTLYYFLKKRQIWRFFLILSI-VFYLISSPFFVYFLSKSF-----YIKEKNI 70
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++IV+LG G T + E + R+ + +Y+ II G
Sbjct: 71 PDSQNSVIVILGGGITFFD----GKYEVGNHTLKRLLKGFEIYRKTNAP------IIISG 120
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G++ES + + L+ GV +DI +E ++ T +NA F S ++K +NIILV+S
Sbjct: 121 GVIGKGISESAIMKDILVTFGVNINDIIVEDKARTTKENAIFVSKLLKGKNFENIILVTS 180
Query: 182 AYHLKRSQLYFQHF-GINTKA----SCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
H+KRS + F+ + N D+ N++ +P + Y E+ GIL
Sbjct: 181 FLHMKRSIMLFEKYSKKNIIPIVCDYPIDFRNSFLDYLPSAEALYTFSQITHEFFGILK 239
>gi|296387487|ref|ZP_06876962.1| hypothetical protein PaerPAb_05012 [Pseudomonas aeruginosa PAb1]
Length = 222
Score = 97.9 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 83/226 (36%), Gaps = 13/226 (5%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTT 77
C + + + + L+ P + + IV+LG G
Sbjct: 1 PRLARLCGVCGFFGLWLMSMPLSVEWMGRWLESEPALLAEDLPGLAQRADAIVILGAGRQ 60
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS + R+ RL + ++ISGG +E+ + N
Sbjct: 61 TNDPAW-GDDAPSLLAAERLRYAARLA-----KTSALPVLISGGLHYGRPPSEAALMANA 114
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
LL+ + S T++NA S+ ++ + ++LV+ A+H++R++ F+ G
Sbjct: 115 LLQDFGVPTRWQEGL-SRTTWENATLSAPQLREAGVRRVVLVTQAWHMQRARWSFERQGF 173
Query: 198 NTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + L + +P + F+ + + L E IG++
Sbjct: 174 EVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLNEAIGLVGYRL 219
>gi|77360123|ref|YP_339698.1| enzyme [Pseudoalteromonas haloplanktis TAC125]
gi|76875034|emb|CAI86255.1| conserved protein of unknown function ; putative enzyme
[Pseudoalteromonas haloplanktis TAC125]
Length = 242
Score = 97.9 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 34/240 (14%), Positives = 89/240 (37%), Gaps = 17/240 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L +F ++ +F + + ++ +++K+ + +
Sbjct: 3 LPLLGLFALIMLLLAFRGKRSALFLSFISLAALLLVSTPLVANLIIKNNES--PALAFNS 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG + A + + +R+ E ++L K + +I+SG
Sbjct: 61 LKQPKIDKIVVLGCDINPNTALSANN-QLGNCALTRLVEGIKLAKLYP----NAQLIVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G Q + S + N + G+ ++ + ++ + + + + LV+
Sbjct: 116 GGYQ--KVTNSSLMYNTAINLGINKNRLVQNPAAM---DTPAEARLLAPTLVDYKVALVT 170
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILI 235
S H+ R++ F G+ + +DY N + ++P + ++ E +G
Sbjct: 171 SVLHMPRAKDLFNAQGVEVITAATDYHNFAVLPWHKQLVPNAQALHVVTQYSHEVVGKAW 230
>gi|114048174|ref|YP_738724.1| hypothetical protein Shewmr7_2682 [Shewanella sp. MR-7]
gi|113889616|gb|ABI43667.1| protein of unknown function DUF218 [Shewanella sp. MR-7]
Length = 244
Score = 97.9 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 100/241 (41%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ L+ + R + L + + L+K L+ Y ++
Sbjct: 13 MPIPFILLLLLLSLLIWRKPRLAKWAIGGAFTLLLVLSSQLSVDYLVKPLETQYP---IN 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
++++LG+G IP A++ S + +R+ E +R Q CT+++S
Sbjct: 70 STPIAGTCVVMVLGSGHADIPGATAVQ-SLSTVALTRLTEGLR----QLQLGQDCTLVVS 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + + + V +E GV+ I DT + A + N + LV
Sbjct: 125 GWEGELTQHPHAEVMAKAAIELGVDASRIVQLPLPRDTIEEAHYFKEHFGNQAVR---LV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+SA H+ RS F G+ A+ +D+ + + N ++ A+ EYIG L +
Sbjct: 182 TSASHMPRSMAIFSGQGLAASAAPTDFRARDGFYWRLTADNLLASQRAIHEYIGRLWLWI 241
Query: 239 R 239
+
Sbjct: 242 K 242
>gi|258512251|ref|YP_003185685.1| hypothetical protein Aaci_2287 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478977|gb|ACV59296.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 259
Score = 97.9 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 23/245 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+V L + L F+ + LL L+ +Y P + G
Sbjct: 21 LTLVLAILLARHRRGFAIAFAAVSLAFAAACTPAVGNWLLIPLERAYAPPA-----RPTG 75
Query: 67 NIIVLLGNG----TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ IV+LG G T S R+ LY +H I++SGG
Sbjct: 76 DAIVVLGAGFSAATPDFADPALDTGTLYGDSGERVLAAAALY-----RRLHLPIVLSGGP 130
Query: 122 --DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
A +++ L GV + D+ ++ S T +NA+ ++ M++ + ILV
Sbjct: 131 LIRANGKSYAFALIAARDLAALGVPQRDLYVDATSRTTEENAEHTAVMLRRLHRSRPILV 190
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTELALKEYIGI 233
+SA + R+ + F+ G+ + Y+ + Y+ +P A T AL E +GI
Sbjct: 191 ASAAQMARAVIDFRRVGVKVEPYPVGYVASSVCTPLAYAWLPSQAGLDETCTALHEDLGI 250
Query: 234 LIAYY 238
L A+
Sbjct: 251 LAAHL 255
>gi|298489000|ref|ZP_07007023.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298156498|gb|EFH97595.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 256
Score = 97.9 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 ILFVLLILGWWLRRSRPSLAAAFFAVGLGGLWLMSLPVAVEFAARKMERVPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARL-----SKTSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + + S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIIAQSLHDDFGVTARWQEGL-SRTTWENATMTAAVLQPLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFEKAGFIVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|113970950|ref|YP_734743.1| hypothetical protein Shewmr4_2615 [Shewanella sp. MR-4]
gi|113885634|gb|ABI39686.1| protein of unknown function DUF218 [Shewanella sp. MR-4]
Length = 244
Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 100/241 (41%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSY-WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ + + + + + L + + L+K L+ Y ++
Sbjct: 13 MPIPFILLLLLLSFWVWRKPRLAKWAIGGAFSLLLVLSSQLSVDYLVKPLETQYP---IN 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
++++LG+ + IP A++ S + +R+ E +R Q CT+++S
Sbjct: 70 STPIAGTCVVMVLGSAHSDIPGATAVQ-SLSAVALARLTEGLR----QLQLGQDCTLVVS 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + + + V +E GV+ I DT + A + N + LV
Sbjct: 125 GWEGELTQHPHAEVMAKAAVELGVDASRIVQLPLPRDTIEEAHYFKEHFGNQAVR---LV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+SA H+ RS F G+ A+ +D+ + + N ++ A+ EYIG L +
Sbjct: 182 TSASHMPRSMAIFSGQGLTASAAPTDFRARDGFYWRLTADNLLASQRAIHEYIGRLWLWI 241
Query: 239 R 239
+
Sbjct: 242 K 242
>gi|315187461|gb|EFU21217.1| protein of unknown function DUF218 [Spirochaeta thermophila DSM
6578]
Length = 249
Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 101/242 (41%), Gaps = 23/242 (9%)
Query: 3 LSWIFLIVSYWHLLCQ-SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L +F ++ L + S R F L ++ +LL L+ ++
Sbjct: 18 LWVVFALLVGAVSLRRGSRRGAVAAWVFAGLLYLGNTHLVEHLLLAPLERAFPVW----D 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+V+LG G + P S +R++ +R + ++++GG
Sbjct: 74 AGGGVRYVVVLGGGAQAGTPAGDV---PGVVSLARLWGGLRYA-----RMLGVPLVLAGG 125
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G +E + + + E G +++ +E +S T++NA+ ++ M+ ++LV+S
Sbjct: 126 SVWDEGKSEGEMMADLVRELG--WEEVVVEGESRTTWENARNTARMVGR---GPVLLVTS 180
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIA 236
AYH++R+ F+ G+ + D+ + + + + + AL+EY+G++
Sbjct: 181 AYHMQRAVWCFRAQGVEVIPAPVDFRDERPAHWIFYLGISAEAARDVQAALREYVGMVWY 240
Query: 237 YY 238
Sbjct: 241 RV 242
>gi|54298617|ref|YP_124986.1| hypothetical protein lpp2681 [Legionella pneumophila str. Paris]
gi|53752402|emb|CAH13834.1| hypothetical protein lpp2681 [Legionella pneumophila str. Paris]
Length = 250
Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 105/242 (43%), Gaps = 20/242 (8%)
Query: 3 LSWIFLIVSYWHLLCQS--IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L + L + + L + + +++ + G +P+ L L+ Y +
Sbjct: 17 LCLLTLGICIFLLYRRRAPTFTKVMLFVVLIVLLAMSTGWLPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G I +PA + + S R+ E +RL+++ + + S
Sbjct: 74 RVNPNVKWVVVLGGGQNIGEEMPANDL-LTSASIKRLIEGVRLFRTLPDAKLLLSGGGSA 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + I +ET S++T A ++++ + LV+
Sbjct: 133 G-----EQSEALLLTELAKWFAIDSEKIVVETASINTADQALELAAIV---HDQPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKMVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|23012908|ref|ZP_00052888.1| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 266
Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 85/236 (36%), Gaps = 20/236 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W L + + + +L +F+ + ++ ++ P P + + I++L
Sbjct: 34 WLSLGRKV-----LGVTLLTVTFMAVVPLEYWAETWMEARFRAPNPLP---EKVDGIIVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G + + ++ +R+ + L K + + + G P L E+
Sbjct: 86 GGAINPVVSEARGQVSVGG-GVTRMTTLIPLAKRYPEARLVFSG--GSGSPFNPELREAD 142
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ G + D I E S +T +NA S +++ G+ +L++SA H+ RS F
Sbjct: 143 YAKIFYDDLGFDTDRIVFERDSRNTRENATLSKELMQPRPGETWLLITSAGHMPRSVGCF 202
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTEL--------ALKEYIGILIAYYRG 240
+ G DY P + + E +G+++ G
Sbjct: 203 RAVGWPVVPIPVDYYTTGLD-KPWWTELRFSPQKGIFGLAPLIHEGLGLVMYRLMG 257
>gi|117921230|ref|YP_870422.1| hypothetical protein Shewana3_2789 [Shewanella sp. ANA-3]
gi|117613562|gb|ABK49016.1| protein of unknown function DUF218 [Shewanella sp. ANA-3]
Length = 244
Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ L+ + R + + L + + L+K L+ Y ++
Sbjct: 13 MPIPFILLLLLLSLLIWRKPRLAKWAIGGVFTLLLVLSSQLSVDYLVKPLEAQYP---IN 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
++++LG+ + IP A++ S + +R+ E +R + CT+++S
Sbjct: 70 STPFAGTCVVMVLGSAHSDIPGATAVQ-SLSTVALARLTEGLR----QLKLGQDCTLVVS 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + + + V +E GV+ I + + ++ + + LV
Sbjct: 125 GWEGELTQHPHAEVMAKAAVELGVDATRIVQLPLP---RDTIEEAHYFKEHFGDQAVRLV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+SA H+ RS F G+ A+ +D+ + + N ++ A+ EYIG L +
Sbjct: 182 TSASHMPRSMAIFSGQGLTASAAPTDFRARDGFYWRLTADNLLASQRAIHEYIGRLWLWI 241
Query: 239 RGN 241
+
Sbjct: 242 KQG 244
>gi|237730883|ref|ZP_04561364.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226906422|gb|EEH92340.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 254
Score = 97.5 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/248 (20%), Positives = 95/248 (38%), Gaps = 20/248 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ L I + + L +K +S L + + LLK ++ SY
Sbjct: 16 LPLMLIIMGIGLALLWFSRFQKTGKVCISLSWLALLLLSLQPVADSLLKPIEDSYPTW-- 73
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
Q + IV+LG G T P A S R+ E +RL+++ +I
Sbjct: 74 --QDTQKVEYIVVLGGGYTWNP-QWAPSSNLISNSLPRLNEGIRLWRANP----GSKLIF 126
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+G + + ++ + GV DI + DT + A I + +L
Sbjct: 127 TGAAAKSNNVSTAEAGARVAQSLGVPPGDIITLDKPKDTEEEAAAVKQAIGS---APFLL 183
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIG 232
V+SA HL R+ ++FQ G++ + ++ LN + IP ++ E +G
Sbjct: 184 VTSASHLPRAMIFFQQAGLHPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLG 243
Query: 233 ILIAYYRG 240
+ + +G
Sbjct: 244 RIWQWLKG 251
>gi|167464933|ref|ZP_02330022.1| hypothetical Membrane Spanning Protein [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322382670|ref|ZP_08056534.1| hypothetical protein PL1_1385 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153368|gb|EFX45791.1| hypothetical protein PL1_1385 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 365
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 102/237 (43%), Gaps = 30/237 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ WI +++ L+ + +F +LL+ F+ I L + + + +P
Sbjct: 125 LLVYWIISLMNPTELISDDWKILFTGVSAILLYMFMD---IANFLTASILYQFNKP---- 177
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + + +++ G+G P + SRI + + Y + + +I SG
Sbjct: 178 --KYNQDFVIVHGSGLIHDKVPPLL--------ASRIDKAIEFYWMQSKVASPPKLIFSG 227
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--L 178
G ++E+ +E G+ +D E QS T++N +S +++++ G+
Sbjct: 228 GKGSDENVSEAEAMQIYAIEKGIPIEDTIQENQSRSTYENLLYSKRIMESINGEKYNSIF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
VS+ +H+ R+ +Y + G+++ S + +Y ++EYI I +
Sbjct: 288 VSNNFHIFRAGMYARQLGLDSHCIGS-----------KTVFYYWLNAMIREYIAIFV 333
>gi|194335748|ref|YP_002017542.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308225|gb|ACF42925.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 248
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 19/250 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSI---RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L + L + L + R FF+ LL ++ L++ ++ R +
Sbjct: 5 ILPLLVLPSGFSLLCLLAGLLLRNSFFLWLGTLLLLAFSMPVMSDFLMRSVEVGEGRVPV 64
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S + IV+L + P + R + L+K+ + + T
Sbjct: 65 SS--VGKADAIVVLSGMIVTVDGAPLGEW---GGAVDRFDGGVELFKAGRAPVVVFTR-- 117
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM---IKNMQGKN 175
Q + E + + L GV + I+L ++ +T A +S + K +
Sbjct: 118 GQVPWQPGVVPEGELLAKRALLLGVPQSAIRLTGKAGNTADEAAAASVLLGASKKGVPRR 177
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKE 229
IILV+SA+H++R++ F+ G + DY + S +P + ++ AL+E
Sbjct: 178 IILVTSAFHMRRARFLFERAGFAVEPFLVDYQTSEKSPLTVLSFLPNAEALAQSDRALRE 237
Query: 230 YIGILIAYYR 239
IG+L +
Sbjct: 238 VIGLLFYWVT 247
>gi|283784746|ref|YP_003364611.1| hypothetical protein ROD_09881 [Citrobacter rodentium ICC168]
gi|282948200|emb|CBG87767.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 255
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ LL+ ++ Y Q + + IV+LG G T P A S R+ E
Sbjct: 57 PVADGLLRPIETRYPTW----QATQKVDYIVVLGGGYTWNP-QWAPSSNLLNNSLPRLNE 111
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+RL+++ +I +G + ++ + GV R DI + + DT +
Sbjct: 112 GIRLWRANP----GAKLIFTGARALTNPVSTAEAGARVAESLGVPRSDIIVLDRPKDTEE 167
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSI 213
A I +LV+SA HL R+ ++FQ G + + ++ LN +
Sbjct: 168 EAAAVKQTIG---DTPFLLVTSASHLPRAMIFFQQAGTHPLPAPANQMAIDSPLNPWERA 224
Query: 214 IPLSANFYLTELALKEYIGILIAYYRG 240
IP ++ E +G L + +G
Sbjct: 225 IPSPYWLMHSDRVGYETLGRLWQWLKG 251
>gi|170744388|ref|YP_001773043.1| hypothetical protein M446_6345 [Methylobacterium sp. 4-46]
gi|168198662|gb|ACA20609.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 273
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 11/205 (5%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ LL+ L+ + + +V+LG + + R+
Sbjct: 59 PLDQWLLRPLEERFPA----AAGLARVDGVVVLGGALAEGIRAERGAPGLNRE-ADRLVA 113
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
L + + + G ++ GL E+ L E G+ + ++ +S T++
Sbjct: 114 FAALARRYPAAKLVFAGGPASG--RREGLTEAQASRALLEEIGLPPGRLLVDDRSRSTWE 171
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT-KASCSDYLNAYYS---IIP 215
NA + ++ + G+ +LV+SA H+ R+ F+ G A Y + P
Sbjct: 172 NAVEARALARPGPGETWLLVTSASHMPRAMGAFRRAGWPPLLAWPVAYRTTRRGAAALRP 231
Query: 216 LSANFYLTELALKEYIGILIAYYRG 240
L A +LA E+ G+L RG
Sbjct: 232 LGAKLAAIDLAAHEWAGLLAYRLRG 256
>gi|310767187|gb|ADP12137.1| hypothetical protein EJP617_24560 [Erwinia sp. Ejp617]
Length = 262
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 19/237 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K +S L + + LL L+ Y + +
Sbjct: 27 LFLLWFSHWQKSAKT-LISVAWLTLLLLSLQPVADRLLVPLENQYPTWHH----QHPLDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +R++++ Q +I +G Q + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNMLNNSLPRLAEGIRIWRANPQ----AKLIFTGSKAQHNPM 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + + + GV I + + DT Q A + ++ N LV+SA HL R+
Sbjct: 137 SSAALTASVAQSLGVPATAIIILDKPRDTEQEAHEVAKIVHNQPFA---LVTSANHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+FQ+ G+ + ++ LN + ++P S +E A+ E IG L +
Sbjct: 194 IRFFQYEGLQPWPAPANQLAIASPLNFWERVLPSSFWLGHSERAVYENIGRLWQRLK 250
>gi|303253664|ref|ZP_07339802.1| hypothetical protein APP2_0852 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248075|ref|ZP_07530104.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302647584|gb|EFL77802.1| hypothetical protein APP2_0852 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855473|gb|EFM87647.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 246
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 22/242 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + W+F ++ YW L + + T L L L+
Sbjct: 18 IAVIWLFSLICYWLNL--KKISYSLAFLGIGSLYLFSTPYVATKLTDSL---VTEDNLAL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IV+LG G I I Q+ R+ L ++ + +I
Sbjct: 73 EDYKKAQAIVVLGGGVRDSKEIYNP-IAVGNQALERMRYAAYL----QKETQLPLLITGS 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+G +E+ N+ + LE ++ T +NAQFS ++ IILV+
Sbjct: 128 ---SPNGTSEAKTMANEF-QYFFSVSTQWLEEKAKTTKENAQFSRELLAKEGINKIILVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +H+KR+++ F+ G + ++Y+N + IP S L+LKE++G
Sbjct: 184 NQWHMKRAKMLFEKQGFEVLPASIGHGVTPTEYIN-FAYFIPQSGAMDSIMLSLKEWLGY 242
Query: 234 LI 235
Sbjct: 243 WK 244
>gi|254409849|ref|ZP_05023630.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183846|gb|EDX78829.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 325
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 87/223 (39%), Gaps = 25/223 (11%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+L + + P + + IV+LG GTT P +++ + R
Sbjct: 102 STPFFSNLLAASTEQAVVTPESAAAQT--ASAIVVLGQGTTQPDEPPRTQVQL-TDTGDR 158
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQK-----HGLAESIVYNNKLLESGVERDDIKLE 151
I +LY+ + +++S G + E+ + L++ GV + I LE
Sbjct: 159 ILYAAQLYRQ---SGNNPLVVVSAGPRPNLQGNQDQIVEANDIRSLLVQFGVPQSRIVLE 215
Query: 152 TQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGIN-TKASCSDYLN 208
++ +A+ ++++ + LV+SAY+ +R+Q F+ G+N A + +
Sbjct: 216 PTGINLRTSAEEVEDILRDRGIADNRVFLVTSAYNSRRAQQAFRSVGLNNVVAKPTGFFT 275
Query: 209 -----------AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
S IP +T ++E+ + Y RG
Sbjct: 276 VQPGTTSTINQWIESFIPSVEALTVTTRIVEEFYASIYYYLRG 318
>gi|330873571|gb|EGH07720.1| hypothetical protein PSYMP_04175 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 256
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 82/228 (35%), Gaps = 13/228 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW-KKDGNIIVLLG 73
+ + + + ++ + ++ P + + IVLLG
Sbjct: 28 RRSRPRLATACFAAGLGGLWLMSLPVVVEFAARKMEQIPPLPQQQWATLAQQADAIVLLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
NG P+ R+ RL K I+ +GG +E+ +
Sbjct: 88 NGRERNSPTW-GADTPTGLGLERLRLAARLAKE-----SGLPILTTGGLHFDQPPSEASI 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L + + S T++NA ++++++ K ++LV+ A+H+ R++ F+
Sbjct: 142 MAQALQQDFGVTVRWQEGL-SRTTWENATMTAAVLEPQGIKRVVLVTQAWHMPRARWSFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
G + +L + +P S F + + L E G+L+
Sbjct: 201 QAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|229175521|ref|ZP_04303031.1| hypothetical protein bcere0006_45990 [Bacillus cereus MM3]
gi|228607917|gb|EEK65229.1| hypothetical protein bcere0006_45990 [Bacillus cereus MM3]
Length = 344
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 97/227 (42%), Gaps = 31/227 (13%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L + + IF + ++ F+ + L + + + RP +++ + I++
Sbjct: 118 PASLFSEHFQFIFAAISLITMYFFVH---LSNFLSAYFLYQFNRP------RRNQDFIIV 168
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG+G P + SRI + + Y + TII SGG GL E+
Sbjct: 169 LGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSGGQGPDEGLPEA 220
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRS 188
+E G+ + E +S++T+QN FS ++ +++ I ++ +HL R+
Sbjct: 221 EAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSIFTTNNFHLFRA 280
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 281 GIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|52842834|ref|YP_096633.1| hypothetical protein lpg2628 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629945|gb|AAU28686.1| membrane protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 250
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/242 (20%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 3 LSWIFLIVSYWHLLCQ--SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L + L + + L + + +++ + G +P+ L L+ Y +
Sbjct: 17 LCLLALGICIFLLYRRLAPTFTKVMLFVVLIVLLAMSTGWLPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G I +PA + + S R+ E +RL+++ + + S
Sbjct: 74 RVNPNVKWVVVLGGGQNIGEEMPANDL-LTSASIKRLIEGVRLFRTLPDAKLLLSGGGSA 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + + +ET S++T A+ ++++ + LV+
Sbjct: 133 G-----EQSEALLLTELAKWFAIDSEKVVVETVSINTADQARELAAIV---HDQPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKMVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|52080430|ref|YP_079221.1| hypothetical protein BL02952 [Bacillus licheniformis ATCC 14580]
gi|52785809|ref|YP_091638.1| hypothetical protein BLi02055 [Bacillus licheniformis ATCC 14580]
gi|319645611|ref|ZP_07999843.1| hypothetical protein HMPREF1012_00876 [Bacillus sp. BT1B_CT2]
gi|52003641|gb|AAU23583.1| conserved hypothetical membrane protein [Bacillus licheniformis
ATCC 14580]
gi|52348311|gb|AAU40945.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
gi|317392497|gb|EFV73292.1| hypothetical protein HMPREF1012_00876 [Bacillus sp. BT1B_CT2]
Length = 343
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 101/237 (42%), Gaps = 30/237 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++ ++ ++ L +++ +F S + ++ F + L + + + RP L
Sbjct: 107 IIIFFLLSVIDPARFLSPNVQPLFAGSSLIAVYFFFH---LTNFLTAYFLYQFNRPKL-- 161
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+G P + SRI + + Y+ + II SG
Sbjct: 162 ----NQDYIIVLGSGLINDTVPPLL--------ASRIDKAVDFYRKQAAVAPPPKIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--L 178
G L+E+ L+ G+ + E +S++T+QN FS ++ ++
Sbjct: 210 GQGPDENLSEAEAMQRYALKKGIPEEHTFKEDRSVNTYQNMLFSKQLMDSLSDGKYNSIF 269
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ LY + G+ ++ S +A +Y ++EYI +++
Sbjct: 270 TTNNFHLFRASLYAKRAGLKSQGIGS-----------KTAFYYWPNAMIREYIAVVV 315
>gi|307261514|ref|ZP_07543183.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868797|gb|EFN00605.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 246
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 22/242 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + W+F ++ YW L + + T L L L+
Sbjct: 18 IAVIWLFSLICYWLNL--KKISYSLAFLGIGSLYLFSTPYVATKLTDSL---VTEDNLTL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IV+LG G I I Q+ R+ L ++ + +I
Sbjct: 73 EDYKKAQAIVVLGGGVRDSKEIYNP-IAVGNQALERMRYAAYL----QKETQLPLLITGS 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+G +E+ N+ + LE ++ T +NAQFS ++ IILV+
Sbjct: 128 ---SPNGTSEAKTMANEF-QYFFSVPTQWLEEKAKTTKENAQFSRELLAKEGINKIILVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +H+KR+++ F+ G + ++Y+N + IP S L+LKE++G
Sbjct: 184 NQWHMKRAKMLFEKQGFEVLPASIGHGVTPTEYIN-FAYFIPQSGAMDSIMLSLKEWLGY 242
Query: 234 LI 235
Sbjct: 243 WK 244
>gi|325276217|ref|ZP_08142016.1| hypothetical protein G1E_22290 [Pseudomonas sp. TJI-51]
gi|324098646|gb|EGB96693.1| hypothetical protein G1E_22290 [Pseudomonas sp. TJI-51]
Length = 253
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 85/221 (38%), Gaps = 12/221 (5%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK-DGNIIVLLGNGTTIIPTI 82
+ + ++ + L+ + + IV+LG G
Sbjct: 37 LCFGVGLGGLWLMSLPLVVQETARVLETEPPLAVSDWARLASRADAIVVLGAGRERGDPA 96
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+P+ + R+ RL K+ ++ SGG +E+ + ++L E
Sbjct: 97 WGGGDQPTATALERMRFAARLAKA-----SGLPVLTSGGLHYGTPPSEAQLMADRLREDF 151
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
E S T++NAQ S+ +++ + + +++V+ A+H++RS+ F+ G +
Sbjct: 152 AVEVR-WREEASRTTWENAQLSAKVLQPLGIRRVVVVTQAWHMQRSRWSFEQAGFEVVPA 210
Query: 203 CSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+L + ++P S + + L E +G++
Sbjct: 211 PVGFLGREHARPFGGLLPESRAMWQSGQLLNEVVGLVGYRV 251
>gi|78187520|ref|YP_375563.1| hypothetical protein Plut_1666 [Chlorobium luteolum DSM 273]
gi|78167422|gb|ABB24520.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 246
Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 84/220 (38%), Gaps = 15/220 (6%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ + ++ L+ L+ +R + + IV+LG T +P P
Sbjct: 33 LAWAGVAMLLIASMPVVGNSLIGILEGPARR--VPAASVAHADAIVVLGGMTMQLPGAPL 90
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
++ R + LY+ K + T +++ + E + + L+ +
Sbjct: 91 GEW---GEAADRFEAGIDLYREGKAPLLVFTG--GRLPWRENFVPEGELLALRALQLDIP 145
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
R + + + +T A ++ ++ K IILV+SA+H+ RS L F G +
Sbjct: 146 RASVLVTGIAGNTSDEAGAAAELLGPS--KKIILVTSAFHMPRSILLFHRAGFSVVPCRV 203
Query: 205 DYLNAY------YSIIPLSANFYLTELALKEYIGILIAYY 238
DY S +P + +AL+E +GI+
Sbjct: 204 DYRVQPAERMTVLSFMPDPEALQQSFIALREIMGIVWYRV 243
>gi|46143233|ref|ZP_00135637.2| COG1434: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207969|ref|YP_001053194.1| hypothetical protein APL_0485 [Actinobacillus pleuropneumoniae L20]
gi|126096761|gb|ABN73589.1| hypothetical protein APL_0485 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 252
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ + F L+ +
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQAVTF---SEKLTIE 77
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + R + R+ L+K I+++GG
Sbjct: 78 DYKKAQAIVVLGGGVRNSHELF-GRYAIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L + +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGRE-PEAKIMAQELHDF-FNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRAKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|157369964|ref|YP_001477953.1| hypothetical protein Spro_1721 [Serratia proteamaculans 568]
gi|157321728|gb|ABV40825.1| protein of unknown function DUF218 [Serratia proteamaculans 568]
Length = 257
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 19/207 (9%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ LL+ ++ Y ++ + N IV+LG G T P A S R+ E
Sbjct: 57 PVADRLLRPIESEY----VTYRGNDPVNYIVVLGGGYTFNPD-WAPSSNLIGNSLPRVTE 111
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+RLY + M T G L+ + GV R DI L + LDT Q
Sbjct: 112 GVRLYLAHPGAKMVFT-----GAGSPKTLSNAATAAQVAESLGVPRSDIVLLDRPLDTEQ 166
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSI 213
A S ++ ILV+SA HL R+ +F+ G++ + ++ LN + +
Sbjct: 167 EALQVSKLVGQQPF---ILVTSANHLPRAMRFFEAKGLHPIPAPANQLAISSQLNIWDRV 223
Query: 214 IPLSANFYLTELALKEYIGILIAYYRG 240
+P + +E A E +G L +G
Sbjct: 224 VPSAMFLGHSERAWYETLGSLWQRLKG 250
>gi|331014754|gb|EGH94810.1| hypothetical protein PLA106_02555 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 256
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/235 (17%), Positives = 85/235 (36%), Gaps = 15/235 (6%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW-KKDGNIIVLLG 73
+ + + + + + ++ P + + IV+LG
Sbjct: 28 RRSRPRLATACFAAGLGGLWLMSVPAVVEFAARKMEQIPPLPQQQRATLAQQADAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
NG P+ R+ RL K I+ +GG +E+ +
Sbjct: 88 NGRERNSPTW-GADTPTGLGLERLRLAARLAKE-----SGLPILTAGGLHFDQPPSEASI 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L + + S T++NA ++++++ K ++LV+ A+H+ R++ F+
Sbjct: 142 MAQALQQDFGVTVRWQEGL-SRTTWENATMTAAVLQPQGIKRVVLVTQAWHMPRARWSFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA--YYRGN 241
G ++ +L + +P S F + + L E G+L+ YRG
Sbjct: 201 QAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVYPWIYRGG 255
>gi|46143765|ref|ZP_00134210.2| COG1434: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208505|ref|YP_001053730.1| hypothetical protein APL_1031 [Actinobacillus pleuropneumoniae L20]
gi|303251036|ref|ZP_07337222.1| hypothetical protein APP6_0335 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307245941|ref|ZP_07528024.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307250279|ref|ZP_07532233.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307252669|ref|ZP_07534561.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|126097297|gb|ABN74125.1| hypothetical protein APL_1031 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302650046|gb|EFL80216.1| hypothetical protein APP6_0335 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306853160|gb|EFM85382.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306857720|gb|EFM89822.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859845|gb|EFM91866.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 246
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 22/242 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + W+F ++ YW L + + T L L L+
Sbjct: 18 IAVIWLFSLICYWLNL--KKISYSLAFLGIGSLYLFSTPYVATKLTDSL---VTEDNLTL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IV+LG G I I Q+ R+ L ++ + +I
Sbjct: 73 EDYKKAQAIVVLGGGVRDSKEIYNP-IAVGNQALERMRYAAYL----QKETQLPLLITGS 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+G +E+ N+ + LE ++ T +NAQFS ++ IILV+
Sbjct: 128 ---SPNGTSEAKTMANEF-QYFFSVPTQWLEEKAKTTKENAQFSRELLAKEGINKIILVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +H+KR+++ F+ G + ++Y+N + IP S L+LKE++G
Sbjct: 184 NQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYIN-FAYFIPQSGAMDSIMLSLKEWLGY 242
Query: 234 LI 235
Sbjct: 243 WK 244
>gi|283833789|ref|ZP_06353530.1| putative KicA protein [Citrobacter youngae ATCC 29220]
gi|291070454|gb|EFE08563.1| putative KicA protein [Citrobacter youngae ATCC 29220]
Length = 254
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/248 (18%), Positives = 96/248 (38%), Gaps = 20/248 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ L I + + + +K +S L + + LLK ++ SY
Sbjct: 16 LPLMLIMMGIGLALVWFSRFQKTGKVCISLSWLALLLLSLQPVADSLLKPIEDSYPTW-- 73
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
Q + IV+LG G T P A S R+ E +RL+++ +I
Sbjct: 74 --QDTQKVEYIVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRANP----GSKLIF 126
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+G + + ++ + G+ R +I + + ++++ + +L
Sbjct: 127 TGAAAKTNNVSTAEAGARVAESLGIPRSEIITLDKPK---DTEEEAAAVKHAIGDAPFLL 183
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIG 232
V+SA HL R+ ++FQ G++ + ++ LN + IP ++ E +G
Sbjct: 184 VTSASHLPRAMIFFQQAGLHPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLG 243
Query: 233 ILIAYYRG 240
+ + +G
Sbjct: 244 RIWQWLKG 251
>gi|296446397|ref|ZP_06888341.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
gi|296256032|gb|EFH03115.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
Length = 265
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 90/246 (36%), Gaps = 16/246 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ + + + + + + L+ L+ + P
Sbjct: 19 VVFLMTLGVALLFTRYAKTGRRLATLGLAALLIMAATPLGGALMAALENRFPAPPQDAPP 78
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
IV+LG T R + ++ R+ + L + Q ++ SGG
Sbjct: 79 PDG---IVVLGGAMDEHITAARGRAAFN-EAGERLLAFVELARRYPQ----ARLVFSGGS 130
Query: 123 PQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
E+ E+G+ + + E +S +T++NA ++ + + + +LV+
Sbjct: 131 ASLTEARFTEADAAAVFFREAGLAPERVLYENRSRNTWENAVYTRDLARPASSERWLLVT 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA---YYSIIPL---SANFYLTELALKEYIGIL 234
SA H+ R+ F+ G A DY +S+ P + + A E+IG+
Sbjct: 191 SAAHMPRAMGIFRQVGFPATAFPVDYRTTGHIGWSLRPDKHIADGLAFFDTAAHEWIGLA 250
Query: 235 IAYYRG 240
+ ++ G
Sbjct: 251 VYHWTG 256
>gi|218290184|ref|ZP_03494343.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
gi|218239779|gb|EED06969.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
Length = 259
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 26/249 (10%)
Query: 6 IFLIVSYWH---LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+F +++ L + L F+ + +LL L+ +Y P
Sbjct: 17 LFASITFALSVLLARHRRGFAIAFAAVSLAFAAACTPAVGNLLLIPLERAYAPPA----- 71
Query: 63 KKDGNIIVLLGNGTTIIPTIPAI----RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ G+ IV+LG G + A S R+ LY +H I++
Sbjct: 72 RPTGDAIVVLGAGFSAAAPDFADPAANTGTLYGDSGERVLAAAALY-----RRLHLPIVL 126
Query: 119 SGG---DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
SGG A +++ L GV ++ ++ S T +NA+ +++++ +
Sbjct: 127 SGGPLIRANGKSYAFALIAARDLAALGVPARELYVDATSRTTEENAEHTAAILHRLHRSR 186
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTELALKE 229
ILV+SA + R+ + F+ G+ + Y+ + Y+ +P A T AL E
Sbjct: 187 PILVASAAQMARAVIDFRRVGVKVEPYPVGYVASPVPTPLAYAWLPSEAGLDETCTALHE 246
Query: 230 YIGILIAYY 238
+GIL A
Sbjct: 247 DLGILAARL 255
>gi|259908912|ref|YP_002649268.1| hypothetical protein EpC_22650 [Erwinia pyrifoliae Ep1/96]
gi|224964534|emb|CAX56044.1| conserved uncharacterized protein YcbC [Erwinia pyrifoliae Ep1/96]
gi|283478907|emb|CAY74823.1| Uncharacterized protein ycbC [Erwinia pyrifoliae DSM 12163]
Length = 262
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 19/237 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K +S L + + LL L+ Y + +
Sbjct: 27 LFLLWFSHWQKSAKT-LISVAWLTLLLLSLQPVADRLLVPLENQYPTWHH----QHPLDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +R++++ Q +I +G Q + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNMLNNSLPRLAEGIRIWRANPQ----AKLIFTGSKAQHNPM 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + + + GV I + + DT Q A + ++ N LV+SA HL R+
Sbjct: 137 SSAALTASVAQSLGVPATAIIILDKPRDTEQEAHEVAKIVHNQPFA---LVTSANHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+FQ+ G+ + ++ LN + ++P S +E + E IG L +
Sbjct: 194 IRFFQYEGLQPWPAPANQLAISSPLNFWERVLPSSFWLGHSERVVYENIGRLWQRLK 250
>gi|21673458|ref|NP_661523.1| hypothetical protein CT0624 [Chlorobium tepidum TLS]
gi|21646562|gb|AAM71865.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 257
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 90/240 (37%), Gaps = 19/240 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I L+++ LL + + + L + ++ L+ + + R + + +
Sbjct: 17 ICLLLAIAGLLFKRR---SLVWISLALLWALSLPVVGQALMHRTEEPWHR--VPVEQVRK 71
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ IV+L I P ++ R + L+K+ K + T
Sbjct: 72 ADAIVVLSGMLQQIHGAPLGEF---GEAADRFESGIDLFKAGKAPVLVFTGGQMP--WDP 126
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNIILVSSAY 183
+ E + + GV I+L + +T A ++ ++ + K IILV+SA+
Sbjct: 127 DCVPEGELLAARARLRGVPAGSIRLTSTVANTAGEALATALLLGVSPGKPKRIILVTSAF 186
Query: 184 HLKRSQLYFQHFGINTKASCSDY-------LNAYYSIIPLSANFYLTELALKEYIGILIA 236
H++R+ + F G + D+ IP + + AL+E IG ++
Sbjct: 187 HMQRALMLFMAAGFEVEPCPVDFWATDLKSRTTLLDFIPSANAMNDSATALREMIGQIVY 246
>gi|229128467|ref|ZP_04257446.1| hypothetical protein bcere0015_29130 [Bacillus cereus BDRD-Cer4]
gi|228654970|gb|EEL10829.1| hypothetical protein bcere0015_29130 [Bacillus cereus BDRD-Cer4]
Length = 297
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 99/236 (41%), Gaps = 27/236 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ FL++S + I + +L S + + L + + + RP
Sbjct: 59 IFLSFFLVISLVEPINFFPEAIRTLYWGAVLISLYLFIDLSNFLTAYFLYQFNRP----- 113
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + + I++LG+G P + SRI + YK + S II SGG
Sbjct: 114 -KYNQDFIIVLGSGLINDKVPPLL--------ASRINRAIEFYKKQEAVSSPPKIIFSGG 164
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-- 179
++E+ + +G+ ++ E +S T+QN FS ++++++G +
Sbjct: 165 QGSDENISEAKAMQEYAVNNGIPLENTIKEDRSTTTYQNMLFSKRIMESLKGTQYNCIFS 224
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +H+ R+ LY + G+N++ S +A +Y ++EYI I +
Sbjct: 225 TNNFHVFRAGLYAKIVGLNSQGIGS-----------KTAFYYWPNAMIREYIAIFV 269
>gi|71906187|ref|YP_283774.1| hypothetical protein Daro_0547 [Dechloromonas aromatica RCB]
gi|71845808|gb|AAZ45304.1| Protein of unknown function DUF218 [Dechloromonas aromatica RCB]
Length = 252
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 16/236 (6%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
++ L + LL ++ L+ L+ Q G +I
Sbjct: 25 MAIAGLGRRRRWAFSLAFLGALLLLLQSLPLVGAGLMGTLERRAGP---VLQDAAGGQVI 81
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG+G + R L +++SGG P +
Sbjct: 82 VVLGSGLELNAEEYGGDTATDRTLL-RTRYGATLA-----RRFDLPVLVSGGRPVNATRS 135
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ V + L E QS+DT QNA S++++K + I+LV+ A+H+ R+
Sbjct: 136 EAEVMADILENEFKVPVR-WREMQSMDTIQNAALSAAILKKSGVRRIVLVTQAFHMPRAV 194
Query: 190 LYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGILIAYYR 239
F+ G+ + + + I+P ++ + + AL E++GI+
Sbjct: 195 RLFRAAGLEVIPAPTHFKTGGVGTIGVADILPSASALHNSFYALHEWLGIVWLALT 250
>gi|307260971|ref|ZP_07542653.1| hypothetical protein appser12_5380 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869273|gb|EFN01068.1| hypothetical protein appser12_5380 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 252
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ + F L+ +
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQVVTF---SEKLTIE 77
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + R + R+ L+K I+++GG
Sbjct: 78 DYKKAQAIVVLGGGVRNSHELF-GRYAIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L + +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGRE-PEAKIMAQELHDF-FNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRAKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|165975946|ref|YP_001651539.1| hypothetical protein APJL_0514 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303250279|ref|ZP_07336479.1| hypothetical protein APP6_1694 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252044|ref|ZP_07533944.1| hypothetical protein appser6_5630 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|165876047|gb|ABY69095.1| hypothetical protein APJL_0514 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302650895|gb|EFL81051.1| hypothetical protein APP6_1694 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860513|gb|EFM92526.1| hypothetical protein appser6_5630 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 252
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ + F L+ +
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQAVTF---SEKLTIE 77
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + R + R+ L+K I+++GG
Sbjct: 78 DYKKAQAIVVLGGGVRNSHELF-GRYTIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L + +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGRE-PEAKIMAQELHDF-FNVSVKWVESASNTTEQNAILSKAMLKQESIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|165976456|ref|YP_001652049.1| hypothetical protein APJL_1049 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|307257077|ref|ZP_07538852.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|165876557|gb|ABY69605.1| hypothetical protein APJL_1049 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306864448|gb|EFM96356.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 246
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 22/242 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + W+F ++ YW L + + T L L L+
Sbjct: 18 IAVIWLFSLICYWLNL--KKISYSLAFLGIGSLYLFSTPYVATKLTDSL---VTEDNLAL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IV+LG G I I Q+ R+ L ++ + +I
Sbjct: 73 EDYKKAQAIVVLGGGVRDSKEIYNP-IVVGNQALERMRYAAYL----QKETQLPLLITGS 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+G +E+ N+ + LE ++ T +NAQFS ++ IILV+
Sbjct: 128 ---SPNGTSEAKTMANEF-QYFFSVPTQWLEEKAKTTKENAQFSRELLAKEGINKIILVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +H+KR+++ F+ G + ++Y+N + IP S L+LKE++G
Sbjct: 184 NQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYIN-FAYFIPQSGAMDSIMLSLKEWLGY 242
Query: 234 LI 235
Sbjct: 243 WK 244
>gi|322832243|ref|YP_004212270.1| hypothetical protein Rahaq_1521 [Rahnella sp. Y9602]
gi|321167444|gb|ADW73143.1| protein of unknown function DUF218 [Rahnella sp. Y9602]
Length = 259
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 17/239 (7%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+V W Q K+FF ++ L + + LL+ ++ Y P
Sbjct: 25 IALVLLWMTRWQKTGKVFFSLSWL-LLLLLSLQPVADNLLRPIESVY--PTYQASGNVPV 81
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+V+LG G T P A S R+ E +R+Y++ +I +G +
Sbjct: 82 KYVVVLGGGYTYNP-AWAPSSNLINNSLPRVAEGIRIYRANP----GSKMIFTGARAMTN 136
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + V GV DI L + DT Q A M+ LV+SA HL
Sbjct: 137 PMSSAAVAGKVAESLGVPESDIILLDRPRDTHQEALQVKEMLGEQPFV---LVTSANHLP 193
Query: 187 RSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ ++F+ G+N + ++ LN + +P + +E A E +G +
Sbjct: 194 RAIIFFRQLGLNPIPAPANQLAIDSPLNPWEKALPQALFLSHSERAWYETLGRAWQWMT 252
>gi|300722543|ref|YP_003711833.1| hypothetical protein XNC1_1572 [Xenorhabdus nematophila ATCC 19061]
gi|297629050|emb|CBJ89635.1| putative enzyme [Xenorhabdus nematophila ATCC 19061]
Length = 269
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 91/248 (36%), Gaps = 18/248 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPL 57
+ L I +V+ L +KI +S L+ + I LL ++ Y QR
Sbjct: 16 LPLIIIISLVALILLWFTRWQKIGKAILSLSWLVLLLLSLQPIADKLLLPIEGKYVQRYE 75
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
I +LG G T P A + R+ E +RLY M T
Sbjct: 76 PDISQTTPIKHIAVLGGGFTYNP-HWAPSANLISNNLPRVTEGIRLYHLNPGAKMIFT-- 132
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
G + ++ + V G+ +D + ++ + + + I
Sbjct: 133 ---GGKGVNSISSAEVAAMVAQSMGIPVEDTIALKNP---LDTEEEAAEIENVIGKQPFI 186
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYI 231
LV+SA H++R+ +F+ G+ A+ ++ L + IP + F TE A E +
Sbjct: 187 LVTSANHMERAVRFFEQRGLRPIAAPANQLAITTPLYPWEKYIPSAYYFSHTERAWYETL 246
Query: 232 GILIAYYR 239
G + +
Sbjct: 247 GRIWQAIK 254
>gi|119469525|ref|ZP_01612429.1| hypothetical protein ATW7_06698 [Alteromonadales bacterium TW-7]
gi|119447060|gb|EAW28330.1| hypothetical protein ATW7_06698 [Alteromonadales bacterium TW-7]
Length = 258
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 88/239 (36%), Gaps = 17/239 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
F +++ + + + I + +LK+ P +
Sbjct: 24 FFALIALFLAFKGRKFSLVIAFFGLSTLLAISTPFVANQILKN--NEPTSLSFHPSKYPE 81
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ IV+LG P + A + + +R+ E ++L K + +I+SGG
Sbjct: 82 LDKIVVLGCDINPNPVLSANN-QLGNCALTRLVEGVKLAKYYPKSQ----LIVSGGGY-- 134
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ S + +E G+ ++ + +++ AQ ++ + + + LV+S H+
Sbjct: 135 ENITNSSLMYQTAIELGINKNRLLQNPKAM---DTAQEAALLAPKLVDFKVALVTSVLHM 191
Query: 186 KRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+Q F G+ T + +D+ L + ++P + E +G R
Sbjct: 192 PRAQDLFLAQGVITIPAATDFHNFSALPFHKQLVPNAQALLAVTQYSHEVVGTTWIKVR 250
>gi|302392084|ref|YP_003827904.1| hypothetical protein Acear_1326 [Acetohalobium arabaticum DSM 5501]
gi|302204161|gb|ADL12839.1| protein of unknown function DUF218 [Acetohalobium arabaticum DSM
5501]
Length = 264
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKK--DGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+L K L+ + L+S + K + IVLLG+G + +E +
Sbjct: 61 FSSYPGEFLLTKPLESQFDPLLISNRESKVGNSTAIVLLGSGVRRGTSRG---VEIGEIT 117
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQK-HGLAESIVYNNKLLESGVERDDIKLET 152
+R++ T +++K +++SGG + + V LL+ GV+ D I LE
Sbjct: 118 LARLYRTWQIHKE-----TGLDLVVSGGVVPGADNTSGAEVMKEVLLDLGVKEDKIILEK 172
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDY----L 207
++ +T+QNA ++ +++ + + IILV+SA H+KR+ F+ + ++Y
Sbjct: 173 KAKNTWQNAVNTALLLEEREYEQIILVTSALHMKRAVYSFERNCNQRLIPAPANYTFNTD 232
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +P + + AL E+IG++ ++
Sbjct: 233 VSLLDYLPNRESLDNSLAALHEWIGLVWYSFK 264
>gi|293396759|ref|ZP_06641035.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291421023|gb|EFE94276.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 268
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 91/234 (38%), Gaps = 20/234 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K+ ++ + LL+ ++ Y ++ N IV+L
Sbjct: 31 WFTRWQKSAKVILSLSWL-FLLLFSLQPVADRLLRPIESEY----VTYNGNDPVNYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T P A S R+ E +RLY S M T G + L+ +
Sbjct: 86 GGGYTFNP-QWAPSSNLIGNSLPRVTEGVRLYLSHPGAKMVFT-----GARGANTLSNAE 139
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
GV R DI + + LDT Q A + ++ + ILV+SA HL R+ +F
Sbjct: 140 TAARVAASLGVPRSDIVVLDRPLDTEQEAMQVAQLVGKQRF---ILVTSANHLPRAMRFF 196
Query: 193 QHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ G+ + ++ LN + ++P + +E A E +G L +G
Sbjct: 197 EAQGLQPIPAPANQLAIASPLNIWDRVMPSAMFLGHSERAWYETLGSLWQRLKG 250
>gi|190150356|ref|YP_001968881.1| hypothetical protein APP7_1087 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307254915|ref|ZP_07536737.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259356|ref|ZP_07541083.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307263699|ref|ZP_07545307.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189915487|gb|ACE61739.1| hypothetical protein APP7_1087 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306862156|gb|EFM94128.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866592|gb|EFM98453.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306870953|gb|EFN02689.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 246
Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 22/242 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + W+F ++ YW L + + T L L L+
Sbjct: 18 IAVIWLFSLICYWLNL--KKISYSLAFLGIGSLYLFSTPYVATKLTDSL---VTEDNLAL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IV+LG G I I Q+ R+ L ++ + +I
Sbjct: 73 EDYKKAQAIVVLGGGVRDSKEIYNP-IAVGNQALERMRYAAYL----QKETQLPLLITGS 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+G +E+ N+ + LE ++ T +NAQFS ++ IILV+
Sbjct: 128 ---SPNGTSEAKTMANEF-QYFFSVPTQWLEEKAKTTKENAQFSRELLAKEGINKIILVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +H+KR+++ F+ G + ++Y+N + IP S L+LKE++G
Sbjct: 184 NQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYIN-FAYFIPQSGAMDSIMLSLKEWLGY 242
Query: 234 LI 235
Sbjct: 243 WK 244
>gi|260914137|ref|ZP_05920610.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631770|gb|EEX49948.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 249
Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 85/245 (34%), Gaps = 21/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L WIF L ++ + L L L+
Sbjct: 18 VILLWIFAF--LLSLFNYKKLSRASAFLGFIILYLSSIPYVAQKLEDSLVTD---DNLTL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IVLLG G + A ++ + R+ L K+ + I S
Sbjct: 73 SDYQQAEAIVLLGGGIRDSKELYA-KLTVNSIPLERVRYAAYL---QKETELPLLITGSS 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G PQ +I V I E ++ T +NA +++ ++K IILV+
Sbjct: 129 GAPQSEAEVAAIELRYFF---NVPTKWI--EPKARTTKENAIYTAEILKKEGINKIILVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +H++R+ L ++ G + + Y + +P + L LKE++G
Sbjct: 184 NQWHMQRATLLYERQGFKVLPASVGSGETPAVYGVGIWHFLPQAGVINKNMLLLKEWLGY 243
Query: 234 LIAYY 238
L
Sbjct: 244 LKEKL 248
>gi|261344282|ref|ZP_05971926.1| putative membrane protein [Providencia rustigianii DSM 4541]
gi|282567885|gb|EFB73420.1| putative membrane protein [Providencia rustigianii DSM 4541]
Length = 268
Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 78/230 (33%), Gaps = 17/230 (7%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN--IIVL 71
L ++ +L+ + +G I LL ++ Y + + IV+
Sbjct: 31 WLTRWQKSGKTLVTASLLMIALLGLQPISDRLLAPVESQYNKRYELITDNPPSDVKYIVV 90
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G T P + S R+ E +RLY + T + +
Sbjct: 91 LGGGFTYNPD-WSPSSNLLSNSLPRVTEGVRLYLQHPGSKLIFTGGKASSSKSSAEV--- 146
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
GV D T+ DT + A +I LV+SA HL R+
Sbjct: 147 --AAMVAQSLGVPAQDTLPLTEPKDTQEEAFEVEKIIGKQPFL---LVTSANHLPRALKM 201
Query: 192 FQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
F G+ + ++ L N + IP S F +E A E +G +
Sbjct: 202 FTSRGMQPYPAPANQLVITSEINPWERYIPSSFYFSHSERAWYELLGSIW 251
>gi|313677361|ref|YP_004055357.1| hypothetical protein Ftrac_3275 [Marivirga tractuosa DSM 4126]
gi|312944059|gb|ADR23249.1| protein of unknown function DUF218 [Marivirga tractuosa DSM 4126]
Length = 239
Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 88/245 (35%), Gaps = 13/245 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M + I L + + + + + LF + LK Q
Sbjct: 1 MPATLIGLAWLAFFIFRKWKFRKYLAILGFALFIIFTNDFLANWFLKAWQTEAANLESIK 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ VLL T + Q+ RI + + L++ +++ + +
Sbjct: 61 N--QKFTYGVLLTGMTNTLKEPKDRVYF--NQNADRILQAIMLHQQGIIDTLYISGGGAT 116
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ L E+ V +N L D + LE QS +T ++A+F+S+ I + I+L++
Sbjct: 117 ALRKD--LQEARVISNYLESIQFPMDKVILEDQSRNTVESARFASAYISSQ--TEILLIT 172
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILI 235
SA H+ R+ F+ + + +L +P + KE++G
Sbjct: 173 SASHMPRALGCFKKEDFRVQPYPTVFLTNDEMINPSMFLPSDDALLKWNILFKEWMGYSA 232
Query: 236 AYYRG 240
+ G
Sbjct: 233 YWIAG 237
>gi|303252155|ref|ZP_07338323.1| hypothetical protein APP2_1129 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247491|ref|ZP_07529536.1| hypothetical protein appser2_4870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648938|gb|EFL79126.1| hypothetical protein APP2_1129 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855994|gb|EFM88152.1| hypothetical protein appser2_4870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 252
Score = 95.2 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ + F L+ +
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQAVTF---SEKLTIE 77
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + R + R+ L+K I+++GG
Sbjct: 78 DYKKAQAIVVLGGGVRNSHELF-GRYAIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L + +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGRE-PEAKIMAQELHDF-FNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|332342362|gb|AEE55696.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 247
Score = 95.2 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 90/233 (38%), Gaps = 19/233 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILI 235
++FQ G+N + ++ LN + IP ++ E +G +
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIW 246
>gi|296108273|ref|YP_003619974.1| membrane protein [Legionella pneumophila 2300/99 Alcoy]
gi|295650175|gb|ADG26022.1| membrane protein [Legionella pneumophila 2300/99 Alcoy]
Length = 250
Score = 95.2 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 3 LSWIFLIVSYWHLLCQ--SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L + L + + L + + +++ + G +P+ L L+ Y +
Sbjct: 17 LCLLALGICIFLLYRRLAPAFTKVMLFVVLIVLLAMSTGWLPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + +V+LG G I +PA + + S R+ E +RL+++ + + S
Sbjct: 74 QVNPNVKWVVVLGGGQNIGEGMPANDL-LTSASIKRLIEGVRLFRTLPDAKLLLSGGGSA 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + + +ET S++T A+ ++++ + LV+
Sbjct: 133 G-----EQSEALLLTELTSWFAIDSEKVVIETASINTADQARELAAIV---HDQPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKLVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|167854576|ref|ZP_02477357.1| hypothetical protein HPS_02329 [Haemophilus parasuis 29755]
gi|167854331|gb|EDS25564.1| hypothetical protein HPS_02329 [Haemophilus parasuis 29755]
Length = 247
Score = 95.2 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 21/242 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ W+F ++ + L + + L L LS
Sbjct: 18 ILILWLFSLICF--RLKWKKLGYLSTFLGVAMLYIFSIPYTSQKLHDSL---VTEDNLSI 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IVLL G + ++ S + R+ L Q ++I+
Sbjct: 73 EDYKSAQAIVLLSGGLRDSKELF-GKLAISEIALERVRYAAFL-----QKETGLPLLIT- 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+ V +L E LE ++ T +NA+FS +++ I+LV+
Sbjct: 126 -GSSPKGTSEAAVMKKEL-EQFFHIPTQWLEEKAKTTAENAKFSKPILEKEGINKIVLVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +H++R+++ F+ G + Y + IP S + ALKE+IG
Sbjct: 184 NQWHMQRARMLFEREGFKILPASVGAGKMPETYGLNVFYFIPQSGALHSNMHALKEWIGY 243
Query: 234 LI 235
Sbjct: 244 WK 245
>gi|217974034|ref|YP_002358785.1| hypothetical protein Sbal223_2876 [Shewanella baltica OS223]
gi|217499169|gb|ACK47362.1| protein of unknown function DUF218 [Shewanella baltica OS223]
Length = 233
Score = 94.8 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 99/225 (44%), Gaps = 12/225 (5%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +SC L F+ + L++ L+ +Y ++ +++LG+
Sbjct: 17 WRRRSMAKYLVSCAFFLLLFLSSQLGVNTLVRPLESAYP---INSTPITGACFVMVLGSA 73
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I A++ S + +R+ E +R ++ C +I+SG + ++ + +
Sbjct: 74 HSDIQGATAVQ-SLSAVALARLSEGVRQLNLGQE----CKLIVSGWGGELTQVSHAEMMV 128
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N +E GV++ I + DT + AQ+ + + LV+SA H+ R+ F
Sbjct: 129 NAAVELGVDKRRIIQFPLARDTLEEAQYLQWELGE---EPFRLVTSATHMPRAMAIFTAK 185
Query: 196 GINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ +A+ +D++ + + N ++ A+ E IG L + +
Sbjct: 186 DLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHECIGRLWLWLK 230
>gi|320540492|ref|ZP_08040142.1| conserved inner membrane protein [Serratia symbiotica str. Tucson]
gi|320029423|gb|EFW11452.1| conserved inner membrane protein [Serratia symbiotica str. Tucson]
Length = 264
Score = 94.8 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 19/207 (9%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ LL+ ++ YQ + + N IV+LG T P A S R+ E
Sbjct: 58 PVADRLLRPIESEYQ----TYRGHDPVNYIVVLGGSYTFNPD-WAPSSNLIGNSLPRVTE 112
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+RLY + ++ G + L+ + GV DI + LDT Q
Sbjct: 113 GVRLYLTHPGAK-----LVFTGARGVNTLSNAATAARVTESLGVPSRDILRLDRPLDTEQ 167
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSI 213
A ++++ N ILV+SA H+ R+ +F+ G++ + ++ LN + +
Sbjct: 168 EAGQVAALVGNQPF---ILVTSACHMPRAMRFFKAKGLHPIPAPANQLAISSPLNTWQRV 224
Query: 214 IPLSANFYLTELALKEYIGILIAYYRG 240
+P S +E A E +G L G
Sbjct: 225 MPSSMFLSHSEHAWYETLGSLWQRLTG 251
>gi|307256540|ref|ZP_07538321.1| hypothetical protein appser10_5450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864950|gb|EFM96852.1| hypothetical protein appser10_5450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 252
Score = 94.8 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ + F L+ +
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQAVTF---SEKLTIE 77
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + R + R+ L+K I+ +GG
Sbjct: 78 DYKKAQAIVVLGGGVRNSHELF-GRYAIAAAPLERMRYAAYLHKQ-----TGLPILATGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L + +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGRE-PEAKIMAQELHDF-FNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|261339254|ref|ZP_05967112.1| hypothetical protein ENTCAN_05490 [Enterobacter cancerogenus ATCC
35316]
gi|288319111|gb|EFC58049.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316]
Length = 259
Score = 94.8 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 79/207 (38%), Gaps = 18/207 (8%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ LL+ ++ Y Q + IV+LG G T P A S R+ E
Sbjct: 57 PVADGLLRPIENKYPTW----QGNQKVGYIVVLGGGYTWDPD-WAPSSNLINNSLPRLNE 111
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+RL+ + +I +G + + ++ + GV R I DT +
Sbjct: 112 GIRLWLANP----GAKLIFTGAAAKTNPVSTAEAGARVAESLGVPRSSIITLDSPKDTEE 167
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSI 213
A I +LV+SA HL R+ ++F+ G++ + ++ LN +
Sbjct: 168 EAAAVKKAIG---DVPFLLVTSASHLPRAMIFFESQGLHPLPAPANQLAITAPLNPWERA 224
Query: 214 IPLSANFYLTELALKEYIGILIAYYRG 240
IP ++ E +G + + +G
Sbjct: 225 IPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|145629203|ref|ZP_01785002.1| hypothetical protein CGSHi22121_10385 [Haemophilus influenzae
22.1-21]
gi|145639142|ref|ZP_01794749.1| hypothetical protein CGSHiII_03869 [Haemophilus influenzae PittII]
gi|144978706|gb|EDJ88429.1| hypothetical protein CGSHi22121_10385 [Haemophilus influenzae
22.1-21]
gi|145271704|gb|EDK11614.1| hypothetical protein CGSHiII_03869 [Haemophilus influenzae PittII]
gi|309750723|gb|ADO80707.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 247
Score = 94.8 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/240 (19%), Positives = 90/240 (37%), Gaps = 18/240 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ +I + +L+ F I +L + P L+
Sbjct: 19 FVLLIIAAILYLVHFKKLAKFIALISFTWLYIISTPFTGLLLT----DNDDTPALTLDDY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G+ + A S Q R+ L Q ++ +
Sbjct: 75 KQAQAIVILGGGSYPTKELYAETASGSPQ-LERLRYAAFL-----QKETGLPVLTT--GY 126
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G++E + +L +E ++ +T +NA F+ +++ + IILV++ +
Sbjct: 127 SLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILIKDNIQKIILVTNQW 185
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIAYY 238
H+KR++ F+ G + + + ++ S IP + LKE+IG A+Y
Sbjct: 186 HMKRAKYLFEKQGFDVLPAAAASYSSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|152978996|ref|YP_001344625.1| hypothetical protein Asuc_1330 [Actinobacillus succinogenes 130Z]
gi|150840719|gb|ABR74690.1| protein of unknown function DUF218 [Actinobacillus succinogenes
130Z]
Length = 274
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 80/230 (34%), Gaps = 19/230 (8%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
++ L L L+ + ++ IV+LG G
Sbjct: 57 FRFKKLAFLTALFGAVVLYVSSIPYTAERLNNSLTQE---DRLTVEDYRNAQAIVILGGG 113
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ P R+ L+K I+ISG P + A+ ++
Sbjct: 114 LRDSKELFNTITVPGL-VLERMRYAAYLHKE-----TELPILISGASPNGNSEAK-VMGQ 166
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
G++ LE +S +T QNA +S +++ K I+L+++ +H++R+++ F+
Sbjct: 167 EFFTFFGIQPK--WLEERSTNTKQNALYSKEILERENIKRIVLITNQWHMQRAKMLFEKQ 224
Query: 196 GINTKA-------SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G Y + IP + LKE+IG +
Sbjct: 225 GFEVLPASVGPGIVPVSYEHNAMHFIPQAGALNANMQLLKEWIGYWKERF 274
>gi|254360560|ref|ZP_04976709.1| hypothetical protein MHA_0110 [Mannheimia haemolytica PHL213]
gi|261492312|ref|ZP_05988874.1| hypothetical protein COK_0742 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496099|ref|ZP_05992507.1| hypothetical protein COI_1840 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153091100|gb|EDN73105.1| hypothetical protein MHA_0110 [Mannheimia haemolytica PHL213]
gi|261308201|gb|EEY09496.1| hypothetical protein COI_1840 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311995|gb|EEY13136.1| hypothetical protein COK_0742 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 247
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 85/229 (37%), Gaps = 19/229 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L FF +L+ L L + + + K+ IV+LG
Sbjct: 29 FSLGYKYAAYFFALLGILILYIFSIPYTSQKLGDSL---VEAEPFTIEKYKNAQAIVVLG 85
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + ++ + R+ L+K I+ + +G +E+ V
Sbjct: 86 GGLRDSQELF-GKLAITGIPLERMRYAAYLHKE-----TGLPILAT--GSSPNGTSEAKV 137
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
++ + + LE ++ T +NA FS +++ IILV++ +H+KR+++ F
Sbjct: 138 MADEF-KMFFNIETKWLENKAKTTKENAIFSREILEKENIHKIILVTNQWHMKRAEMLFS 196
Query: 194 HFGINTKASCSD-------YLNAYYSIIPLSANFYLTELALKEYIGILI 235
G ++ Y + IP + LALKE+IG
Sbjct: 197 QQGFEVMSASVGSGDTPDHYKLNFMHFIPQAGAMNSNMLALKEWIGYWK 245
>gi|89900349|ref|YP_522820.1| hypothetical protein Rfer_1557 [Rhodoferax ferrireducens T118]
gi|89345086|gb|ABD69289.1| protein of unknown function DUF218 [Rhodoferax ferrireducens T118]
Length = 249
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 89/243 (36%), Gaps = 15/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ I L++++ R ++L ++ L + ++ + L P+
Sbjct: 14 PIALILLLMAWAAY----RRSRVAALLAVVLLYAASVPVLSDPLFRAVEQQ--QLRLIPE 67
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+V+L IP E + R F M LY + K + T +
Sbjct: 68 AVAPAQAVVVLSGMMVNIPGKQGGAPEWG-DAVDRFFGGMELYAAGKAPRLVFTGGLLP- 125
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
Q E V L GV + + + + +T Q + ++ + I+LV+S
Sbjct: 126 -WQGEQEPEGQVLRRMALRFGVPANAVVVSGPAQNTEQESAAVRQLLGP-GVRRIVLVTS 183
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R+Q F+ G D+ +P ++ T++A++E +G
Sbjct: 184 AFHMPRAQRLFEQAGFVVTPYPVDFRVTVRGTTPMDYLPEASALERTDIAVRELLGRGYY 243
Query: 237 YYR 239
R
Sbjct: 244 ALR 246
>gi|190149832|ref|YP_001968357.1| hypothetical protein APP7_0563 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307249724|ref|ZP_07531703.1| hypothetical protein appser4_5270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307263153|ref|ZP_07544774.1| hypothetical protein appser13_5750 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914963|gb|ACE61215.1| hypothetical protein APP7_0563 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306858232|gb|EFM90309.1| hypothetical protein appser4_5270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306871515|gb|EFN03238.1| hypothetical protein appser13_5750 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 252
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 95/243 (39%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ + F L+ +
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQAVTF---SEKLTIE 77
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + R + R+ L+K I+++GG
Sbjct: 78 DYKKAQAIVVLGGGVRNSHELF-GRYAIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ I+ V +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGREPEAKIIAQELHDFFNVSVK--WVESASNTTEQNAILSKAMLKQEGIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRAKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|307245325|ref|ZP_07527413.1| hypothetical protein appser1_5300 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254278|ref|ZP_07536118.1| hypothetical protein appser9_5280 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258738|ref|ZP_07540470.1| hypothetical protein appser11_5360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853666|gb|EFM85883.1| hypothetical protein appser1_5300 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862757|gb|EFM94711.1| hypothetical protein appser9_5280 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867089|gb|EFM98945.1| hypothetical protein appser11_5360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 252
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ + ++ L+ +
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQAV--TFSEK-LTIE 77
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + R + R+ L+K I+++GG
Sbjct: 78 DYKKAQAIVVLGGGVRNSHELF-GRYTIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L + +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGRE-PEAKIMAQELHDF-FNVSVKWVESASNTTEQNAILSKAMLKQESIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGSWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|317047567|ref|YP_004115215.1| hypothetical protein Pat9b_1338 [Pantoea sp. At-9b]
gi|316949184|gb|ADU68659.1| protein of unknown function DUF218 [Pantoea sp. At-9b]
Length = 261
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 86/234 (36%), Gaps = 19/234 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q KI +S L + + LL L +Y + + IV+L
Sbjct: 31 WFSRWQKSGKI-LISISWLTLLLLSLQPVADRLLLPLDNAYPTWNRNVS----VDYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T P A S R+ E +R ++ Q +I +G + ++ +
Sbjct: 86 GGGYTFNPD-WAPSSNLIGNSLPRVAEGVRQWRRYPQ----AKMIFTGAAAGNNPMSNAR 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V GV I + Q DT + AQ + LV+SA HL R+ +F
Sbjct: 141 VAAQVAESLGVPESVIIVLDQPKDTREEAQAVKIAVGQHPFL---LVTSANHLPRAMQFF 197
Query: 193 QHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Q G+N + ++ LN + +P +E A+ E +G RG
Sbjct: 198 QGAGLNPLPAPANQMAITSPLNGWERALPSPLWLSHSERAIYETLGRAWQALRG 251
>gi|289207946|ref|YP_003460012.1| hypothetical protein TK90_0761 [Thioalkalivibrio sp. K90mix]
gi|288943577|gb|ADC71276.1| protein of unknown function DUF218 [Thioalkalivibrio sp. K90mix]
Length = 262
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 82/216 (37%), Gaps = 21/216 (9%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
++ L L+ S + IV+LG G + A + +++ R
Sbjct: 52 SLQVVAQPLADTLERE---VRDSVLATGRADAIVILGGGRWVGRAEDAGHDALNPRTHER 108
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQS 154
+ RL+++ I++SGG P+ +E+ + L + LE S
Sbjct: 109 VRAGARLHRA-----TDLPIVVSGGTPRALPGRRSEAELMAATLQQDLGVSAR-WLENTS 162
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------N 208
+T +NA + ++ + +++V+ A HL R+ F+ G + + + +
Sbjct: 163 RNTCENATHTRQRLQGQGVEAVLVVTQAMHLPRALECFERAGFDAYPAPAGFRGTTGEPR 222
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIA----YYRG 240
+P + + AL+E++ + RG
Sbjct: 223 GLQDFLPTAEAIETSRFALREWLARVALPLRERLRG 258
>gi|308186266|ref|YP_003930397.1| hypothetical protein Pvag_0746 [Pantoea vagans C9-1]
gi|308056776|gb|ADO08948.1| Uncharacterized protein ycbC [Pantoea vagans C9-1]
Length = 261
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 18/205 (8%)
Query: 42 PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
LL L Y + + IV+LG G T P A S R+ E +
Sbjct: 59 ADRLLLPLDNRYPTW----NGAEKVDYIVVLGGGYTFNPV-WAPSSNLLNNSLPRVAEGI 113
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
R ++ Q T+I +G + + + V GV R+ I++ Q DT A
Sbjct: 114 RQWQRNPQS----TLIFTGAAGGTNPKSSAWVAAQVAESLGVPREHIQILDQPRDTADEA 169
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIP 215
Q +++ + ++LV+SA H+ R+ +F G+ A+ ++ LN + IP
Sbjct: 170 QAVKTVVG---DRPMLLVTSANHMPRAIRFFHAVGLKPIAAPANQLAITSPLNGWERAIP 226
Query: 216 LSANFYLTELALKEYIGILIAYYRG 240
S +E A+ E +G L+ +G
Sbjct: 227 SSIWLSHSERAVYETLGTLLQRLKG 251
>gi|260582799|ref|ZP_05850585.1| molybdate ABC transporter permease [Haemophilus influenzae NT127]
gi|260094125|gb|EEW78027.1| molybdate ABC transporter permease [Haemophilus influenzae NT127]
Length = 247
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/240 (19%), Positives = 89/240 (37%), Gaps = 18/240 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ +I + +L+ F I +L + P L+
Sbjct: 19 FVLLIIAAILYLVHFKKLAKFIALISFTWLYIISTPFTGLLLT----DNDDTPALTLDDY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G+ + A S Q R+ L Q ++ +
Sbjct: 75 KQAQAIVILGGGSYPTKELYAETASGSPQ-LERLRYAAFL-----QKETGLPVLTT--GY 126
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G++E + +L +E ++ +T +NA F+ +++ + IILV++ +
Sbjct: 127 SLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILVKDHIQKIILVTNQW 185
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIAYY 238
H+KR++ F+ G + + + + S IP + LKE+IG A+Y
Sbjct: 186 HMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|288574503|ref|ZP_06392860.1| protein of unknown function DUF218 [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570244|gb|EFC91801.1| protein of unknown function DUF218 [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 270
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 96/250 (38%), Gaps = 25/250 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF-----FMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
+ LS LI ++ + + +F + ++ + + +LL+ ++
Sbjct: 16 VFLSITILIGTFLTISNRRRGPLFCFVPSIIILSVVFLLSLSLPVTSHLLLRQVE----I 71
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ ++++L G T + + EP + R+ E L
Sbjct: 72 YRKELPPEGPIPVVMILSGGFTR---KNSGKTEPGPFTTQRLIEGASLA-----RRKGYP 123
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I++SGG + + + + G + + I LE S T++N +S+S+++
Sbjct: 124 ILLSGGLSYDKSESIARSMERSIRKWGYKGE-IMLEENSRTTWENMTYSASILRRKGIDR 182
Query: 176 IILVSSAYHLKRSQLYFQHF--GINTKASCS-----DYLNAYYSIIPLSANFYLTELALK 228
IILV++++H+KRS + I D + IP + + LA K
Sbjct: 183 IILVTNSFHMKRSLWMAKKAMPDIEVYPYAIGSLADDMDSDPLKWIPTAGALRDSSLAWK 242
Query: 229 EYIGILIAYY 238
E +G+ +
Sbjct: 243 EIVGLTVYRI 252
>gi|229147646|ref|ZP_04275990.1| hypothetical protein bcere0012_47720 [Bacillus cereus BDRD-ST24]
gi|228635855|gb|EEK92341.1| hypothetical protein bcere0012_47720 [Bacillus cereus BDRD-ST24]
Length = 343
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/235 (19%), Positives = 106/235 (45%), Gaps = 30/235 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ W+ ++ + +SIR +++ + + ++ F+ + L + + + RP
Sbjct: 109 IFWVISLIEPVNFFPESIRTLYWGAVLISIYLFVD---LSNFLTAYFLYQFNRP------ 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + + I++LG+G P + SRI + Y+ + S II SGG
Sbjct: 160 KYNQDFIIVLGSGLINDKVPPLL--------ASRINRAIEFYRKQEAVSSPPKIIFSGGQ 211
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV--S 180
++E+ + +++G+ + E +S T+QN +S ++++++G + +
Sbjct: 212 GPDENISEAEAMQDYAVKNGIPLEHTIKENRSTTTYQNMLYSKEIMESLKGFQYNCIFST 271
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +H+ R+ LY + G+N++ S +A +Y ++EYI I +
Sbjct: 272 NNFHVFRAGLYAKIVGLNSQGIGS-----------KTAFYYWPNAMIREYIAIFV 315
>gi|330960152|gb|EGH60412.1| hypothetical protein PMA4326_16471 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 256
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 15/228 (6%)
Query: 17 CQSIRKIFFMSCFMLL--FSFIGWGIIPTILLKHLQFSYQRPLLSPQW-KKDGNIIVLLG 73
+S ++ + L + ++ + L+ P + + IV+LG
Sbjct: 28 RRSRPRLAAGCFVLGLGGLWLMSLPVVVEFSARQLEQVPPLPQQQWATLAQQADAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
NG P+ R+ RL K I+ +GG +E+ +
Sbjct: 88 NGRERNSPTW-GADTPTGLGLERLRLAARLAKE-----SGLPILTTGGLHFDQPPSEAAI 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L + + S T++NA ++++++ + K ++LV+ A+H+ R++ F+
Sbjct: 142 MAQSLQQDFGVTVRWQEGL-SRTTWENATLTANVLQPLGIKRVVLVTQAWHMPRARWSFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
G + +L + +P S F + + L E G+L+
Sbjct: 201 QAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|148358637|ref|YP_001249844.1| hypothetical protein LPC_0513 [Legionella pneumophila str. Corby]
gi|148280410|gb|ABQ54498.1| conserved hypothetical protein; DUF218 [Legionella pneumophila str.
Corby]
Length = 250
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 105/242 (43%), Gaps = 20/242 (8%)
Query: 3 LSWIFLIVSYWHLLCQ--SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L + L + + L + + +++ + G +P+ L L+ Y +
Sbjct: 17 LCLLALGICIFLLYRRLAPAFTKVMLFVVLIVLLAMSTGWLPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + +V+LG G I +PA + + S R+ E +RL+++ + + S
Sbjct: 74 QVNPNVKWVVVLGGGQNIGEGMPANDL-LTSASIKRLIEGVRLFRTLPDAKLLLSGGGSA 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + +ET S++T A+ ++++ + LV+
Sbjct: 133 G-----EQSEALLLTELTSWFAIDSKKVVIETASINTADQARELAAIV---HDQPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKLVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|52424963|ref|YP_088100.1| hypothetical protein MS0908 [Mannheimia succiniciproducens MBEL55E]
gi|52307015|gb|AAU37515.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 250
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 86/243 (35%), Gaps = 19/243 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + ++ + + + +L L L+ +
Sbjct: 20 ILILLVLSFLFLAFKFKKLAALCALSGLTILYVFSIPYTAQLLNDSLTTE---DNLTVED 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G + P + R+ L+K I+ISG
Sbjct: 77 YRSAQAIVVLGAGLRDSKELYNKITVPG-IALERMRYAAYLHKE-----TELPILISGAG 130
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P + A+ I+ GV+ LE +S +T QNA ++ M++ K IILV++
Sbjct: 131 PNGNSEAK-IMGQEFFTFFGVQPK--WLEERSTNTKQNALYTREMLEREGIKRIILVTNQ 187
Query: 183 YHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+H++R++L F+ G + Y IP + LKE++G +
Sbjct: 188 WHMQRAKLLFEAQGFEVLPASVGSGVTPESYELNAMHFIPQAGAMAANMQLLKEWLGFIK 247
Query: 236 AYY 238
Sbjct: 248 EKL 250
>gi|326799244|ref|YP_004317063.1| hypothetical protein Sph21_1831 [Sphingobacterium sp. 21]
gi|326550008|gb|ADZ78393.1| protein of unknown function DUF218 [Sphingobacterium sp. 21]
Length = 242
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 17/234 (7%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ L +++ L I IP IL+ L+ Y+ S + I+
Sbjct: 18 FLFGKLKRTVVSKRLFVGGFLWLFIITCSPIPNILIYGLESKYR--TYSRSRNDKIDYIL 75
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G T T+P + S S SRI E MR+ K ++ G +++
Sbjct: 76 VLGGGFTENKTLPNFE-QLSTASLSRISEAMRIKKIFPAAK-----LVMSGSKMNRTISQ 129
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ +Y + + E G +R+D+ L + +T + A+ ++ G ILV+ A H++R+
Sbjct: 130 AEIYAHTVFELGFQRNDVVLLNEPKNTAEEAKSFNNKFGK--GAKFILVTDAAHMQRALY 187
Query: 191 YFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIAYYR 239
F+ ++ + +++ YY+ P + +A+ EYIG+L +
Sbjct: 188 AFRD--MSPIPAPTNHYVKEPEKIYYAFKPSYLKIKMMNIAIHEYIGLLFYKLK 239
>gi|311280166|ref|YP_003942397.1| hypothetical protein Entcl_2865 [Enterobacter cloacae SCF1]
gi|308749361|gb|ADO49113.1| protein of unknown function DUF218 [Enterobacter cloacae SCF1]
Length = 259
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ LLK ++ Y + +V+LG G T P A S R+ E
Sbjct: 57 PVADALLKPIESRYPTW----RGATPVRYVVVLGGGYTWNP-AWAPSSNLINNSLPRLTE 111
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+RL+++ +I +G + + ++ + GV R I + DT +
Sbjct: 112 GVRLWQANP----GARLIFTGAAARTNPVSTAEAGARVAESLGVPRSAIIVLETPKDTEE 167
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSI 213
A + + +LV+SA HL R+ ++F+H G+N + ++ LN + +
Sbjct: 168 EAAAVKATVG---DAPFLLVTSASHLPRAMIFFRHAGLNPLPAPANQLAIESPLNPWERM 224
Query: 214 IPLSANFYLTELALKEYIGILIAYYRG 240
IP ++ E +G L + +G
Sbjct: 225 IPSPVWLMHSDRVGYETLGRLWQWLKG 251
>gi|300691119|ref|YP_003752114.1| hypothetical protein RPSI07_1461 [Ralstonia solanacearum PSI07]
gi|299078179|emb|CBJ50822.1| conserved exported protein of unknown function [Ralstonia
solanacearum PSI07]
Length = 265
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 93/250 (37%), Gaps = 17/250 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L L + + ++ L+ +++ LL L
Sbjct: 21 PLVLALLAGVVAWRVPRWRHPAGWVLGIALIVAWMAATPWCGRLLASWTHPVPPLRLDAL 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIE--PSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ +VLLG + A + S S R RL + + ++ +
Sbjct: 81 QPRGEGAVVLLGGSRKLAAREYAGQGATALSGPSLERTVYAARLAHTAR-----LPVLAT 135
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG P+ G+ E+ + + + G + I ET+S T +NA FS+ +++ + I LV
Sbjct: 136 GGAPEGDGVPEAELMRRLVADMGQDARWI--ETRSATTEENAAFSAPILRAAGIQRIYLV 193
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYI 231
+ +H+ R++ YF+ G + + S++P + LT AL+E +
Sbjct: 194 THYWHMARARRYFEGQGFIVTPAPCGWGGEVEESPAGGILSLLPRTDGLMLTRFALREAL 253
Query: 232 GILIAYYRGN 241
G L R
Sbjct: 254 GQLWLSIRQG 263
>gi|299066425|emb|CBJ37610.1| conserved exported protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 265
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 96/250 (38%), Gaps = 17/250 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L L + + + R ++ L+ +++ LL L
Sbjct: 21 PLVLALLAGTVAWRVPRWRRPAGWVLGIALIVAWVAATPWCGRLLASWTHPAPPLRLDAL 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIE--PSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ +VLLG + A + S S R +Y + + H ++ +
Sbjct: 81 QPQGEGAVVLLGGARKLAAREYAGQGATALSGPSLER-----TVYAARLARAAHLPVLAT 135
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG P+ +G+ E+ + + + G + I ET+S T +NA FS+ M++ + I LV
Sbjct: 136 GGAPEGNGVPEAELMRRLVADMGQDARWI--ETRSATTEENAAFSAPMLRAAGIRRIYLV 193
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYI 231
+ +H+ R++ YF+ G + + S++P + LT AL+E +
Sbjct: 194 THYWHMARARRYFEGQGFTVTPAPCGWGGEVEESPAGGILSLLPRTDGLMLTRFALREAL 253
Query: 232 GILIAYYRGN 241
G R
Sbjct: 254 GQWWLSIRQG 263
>gi|226943043|ref|YP_002798116.1| hypothetical protein Avin_09020 [Azotobacter vinelandii DJ]
gi|226717970|gb|ACO77141.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 253
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 84/224 (37%), Gaps = 13/224 (5%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTT 77
+ + + L + ++ P+ + IV+LG G
Sbjct: 32 PRLAAACFTLGAGGLWLLSLPVTVEWLARAIEREPALAEAQWPRLAQRAEAIVVLGGGRE 91
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+PS + R+ RL ++ ++ SGG +E+ +
Sbjct: 92 RGDPAWGGD-QPSPLALERLRYAARLARA-----SGLPLLASGGLHFGAPPSEAALLGEV 145
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L + + E +S T++NA++S+ +++ + ++LV+ A+H+ R++ F+ G
Sbjct: 146 LEKDHGLQLR-WREERSRTTWENARYSAELLQAEGIRRVVLVTQAWHMPRARWCFERAGF 204
Query: 198 NTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + + +L +P + + L L E +G L
Sbjct: 205 SVLPAPAGFLGVPNGRPLGGWLPEGRALWQSGLLLNEALGRLAY 248
>gi|114319324|ref|YP_741007.1| hypothetical protein Mlg_0162 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225718|gb|ABI55517.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 247
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 17/206 (8%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ L+ LQ P + P +D IV+LG G + + + R+
Sbjct: 50 PVGYALMDGLQAD--CPPVQPAQLRDAQAIVVLGAGYRSGADEFSGE-TVNDLALVRLRY 106
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
L++ +I+ G E+ L E GV+ I E+++ DT+
Sbjct: 107 AAYLHRETGLP------VIASGGAATDREPEARWMAEVLAEFGVDP--ILTESEARDTWG 158
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS------DYLNAYYSI 213
NAQ ++ ++ + LVS A+H+ R+ F+ G+ + + D ++ +
Sbjct: 159 NAQHTAELLARQGLSRVALVSHAHHMPRAVWAFEQAGVTVLPAPTGAFVPHDRGWSWGML 218
Query: 214 IPLSANFYLTELALKEYIGILIAYYR 239
P + ++ LA+ EY+G+ +
Sbjct: 219 RPQANALRMSWLAMHEYLGLFWYRWM 244
>gi|315634101|ref|ZP_07889390.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
gi|315477351|gb|EFU68094.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
Length = 247
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 77/240 (32%), Gaps = 19/240 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++L + ++L + L L L+
Sbjct: 18 ILILWLFSLLFSFFKCKTLSRLCAFFGIVLLYLVSIPYTAQTLKDSL---VTEDHLTLND 74
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K IVLLG G + A + S R+ L K+ + I
Sbjct: 75 YKQAQAIVLLGGGVRDSKELYAP-LASSATQLERLRYAAYL---QKETQLPLLISGVSPT 130
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G + LE +SL T +NA ++ +++ IILV++
Sbjct: 131 GASEGKVSAEELQTFF-----NVPTKWLEEKSLTTKENALYTRQLLEKEGIHKIILVTNE 185
Query: 183 YHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+H++R++L FQ G + + Y +P + LKE+IG L
Sbjct: 186 WHMQRAKLLFQQQGFDVLPASVGEGITPDSYGLNMMHFVPQAGAMAKNMQLLKEWIGYLK 245
>gi|266620475|ref|ZP_06113410.1| putative SanA protein [Clostridium hathewayi DSM 13479]
gi|288867927|gb|EFD00226.1| putative SanA protein [Clostridium hathewayi DSM 13479]
Length = 249
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 77/225 (34%), Gaps = 27/225 (12%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + I++ F + + + + + T ++K + + I++LG G
Sbjct: 28 MKKLIKRAFVVLVILGVAGIVCLAAVNTYMIKSTEKR--ILTWKEASSLGADCILVLGAG 85
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+PS R+ + LY++ ++ GD + E
Sbjct: 86 VHPD-------GKPSNMLEDRLLRGIELYEAGASEK-----LLMSGDHGRKNYDEVNAMK 133
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ GV +D+ ++ T+++ + + + + I+V+ YHL R+ +
Sbjct: 134 QFAVDRGVPSEDVFMDHAGFSTYESMYRARDVFEAEKI---IIVTQQYHLYRALYAAKQL 190
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G++ SD ++E + + G
Sbjct: 191 GLDAYGVASDQRT----------YAGQKRRDVRELLARGKDFMTG 225
>gi|149194221|ref|ZP_01871318.1| hypothetical protein CMTB2_06466 [Caminibacter mediatlanticus TB-2]
gi|149135396|gb|EDM23875.1| hypothetical protein CMTB2_06466 [Caminibacter mediatlanticus TB-2]
Length = 242
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 99/241 (41%), Gaps = 23/241 (9%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
IF+I+ + KI F L + + +LL L+ + ++P
Sbjct: 18 IFIIILLIATIFAKRFKILFFISA-LTLYLLSIQPVSNMLLNPLENFKHKDNITPS---- 72
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+V+LG G+ TI A ++ R + L K+ + + SGG K
Sbjct: 73 --AVVVLGGGSNPKDTIKAF-----PDAFKREVYGLILAKTY-----NIPFVFSGGGIGK 120
Query: 126 HGLAESIVYNNKLLESGVERD-DIKLETQSLDTFQNAQFS-SSMIKNMQGKNIILVSSAY 183
AE+ ++ +LL + + E +SL+T QN ++ K KNI LV++AY
Sbjct: 121 ISEAENTKHDVQLLTKTFDVNITTYFEDKSLNTIQNGMYTALLFKKLKLPKNIYLVTNAY 180
Query: 184 HLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H+KRS F+ FG + + + + P + + A+ EY G+L +
Sbjct: 181 HMKRSYKIFKFFGFKIITKPVGFYSKPIESIWDYFPKMNSLNASYKAIHEYFGLLSLKIK 240
Query: 240 G 240
G
Sbjct: 241 G 241
>gi|70732742|ref|YP_262505.1| hypothetical protein PFL_5437 [Pseudomonas fluorescens Pf-5]
gi|68347041|gb|AAY94647.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 253
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 85/230 (36%), Gaps = 13/230 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIVLLG 73
+ + + + F + ++ + L+ P + ++IV+LG
Sbjct: 28 RRSRPRLAGWCFALGLGGFWLMSLPVMVEWGARGLERLPPLPQSQWASLAEQADVIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+G +P+ R RL K+ ++ SGG E+ +
Sbjct: 88 SGRERGDPAW-GSDQPTGVGLERERYASRLAKA-----SGLPVLTSGGLHYGTPPTEAAL 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
LL+ E +S T++NAQFS+ ++ + K +++V+ A+H+ RS F+
Sbjct: 142 MAQSLLDDFGVTVR-WQEGRSRTTWENAQFSAEVLLPLGIKRVVVVTQAWHMPRSVWSFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H G + +L +P + + + L E +G L
Sbjct: 201 HAGFEVVPAPVGFLGVDNARPLGGWMPEFKSIWQSGQLLNEAVGQLGYRL 250
>gi|289522163|ref|ZP_06439017.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503999|gb|EFD25163.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 254
Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 102/246 (41%), Gaps = 21/246 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ +F+ + + + L F + I I+L L+ +++P
Sbjct: 18 ILVLLLFIASLLAFKRPRKVFLGCLLLLIALSFYLLSTPITSRIVLGKLEN-----MVAP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D IV+LG G + E S + R+F + L + I++ G
Sbjct: 73 SLPADKAAIVVLGGGQRRTSDPD--KAEVSPHTLMRLFGGIELALK-----FNWPILLCG 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + ++ I E+QS T++N + +SS++++++ K+ +LV+
Sbjct: 126 GSYSQEVPEAMTMAKK--VKELFPDLPIYEESQSRTTWENIKNASSILRSLELKHAVLVT 183
Query: 181 SAYHLKRSQLYFQHF--GINTKASCS-----DYLNAYYSIIPLSANFYLTELALKEYIGI 233
YH+ R+ L Q IN + + +P +++ ++ LALKE++GI
Sbjct: 184 HGYHMPRAHLIAQGLAPEINWHPFPVGKMADNAPLSIIDFLPGASSLHINSLALKEHVGI 243
Query: 234 LIAYYR 239
+ +
Sbjct: 244 IAYRIK 249
>gi|169828730|ref|YP_001698888.1| hypothetical protein Bsph_3253 [Lysinibacillus sphaericus C3-41]
gi|168993218|gb|ACA40758.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 289
Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 31/227 (13%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L ++ IF + + FI + L + + + RP K + + I++
Sbjct: 63 PASLFSSHLQPIFAGVSLITFYFFIH---LSNFLSAYFLYQFNRP------KYNQDFIIV 113
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG+G P + SRI + + Y S TII SGG L E+
Sbjct: 114 LGSGLINDKVPPLL--------ASRIQKAIDFYHKQATVSTPPTIIFSGGQGSDENLPEA 165
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNIILVSSAYHLKRS 188
+E G+ + E +S++T+QN FS ++ K + N I ++ +HL R+
Sbjct: 166 EAMQRYAIEKGIPIEHTLQENRSVNTYQNMLFSKQIMDDIKQGEAYNSIFTTNNFHLFRA 225
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 226 GIYARLAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 261
>gi|188589627|ref|YP_001922120.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188499908|gb|ACD53044.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
Length = 348
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L I+ + ++ + F+LL+ + L+ + + +P L
Sbjct: 108 LILYLIWSFAISSWNFPEEVKVLLGGINFILLYYLFD---VFNFLMISFLYQFNKPKL-- 162
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G P + SRI + + Y + II SG
Sbjct: 163 ----CQDFIIVLGSGLIGERVPPLL--------ASRIDKAIEFYNKQSTVTNPPKIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI--IL 178
G ++E++ + G+ +D LE +S++T QN FS ++ N+ I
Sbjct: 211 GQGSDEKISEALAMQRYATQKGIPIEDTILEDKSVNTLQNMIFSKKIMDNLIPNTHASIF 270
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V++ +HL R+ ++ + G+ ++ S +A ++L ++EYI ++ Y
Sbjct: 271 VTNNFHLFRAGIFARKAGLKSQGIGS-----------KTAFYFLPNAMIREYIAFVVMY 318
>gi|251779225|ref|ZP_04822145.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243083540|gb|EES49430.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 348
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 98/239 (41%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L I+ + ++ + F+LL+ + L+ + + +P L
Sbjct: 108 LILYLIWSFAISSWNFPEEVKVLLGGINFILLYYLFD---VFNFLMISFLYQFNKPKL-- 162
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G P + SRI + + Y + II SG
Sbjct: 163 ----CQDFIIVLGSGLIGERVPPLL--------ASRIDKAIEFYNKQGTVTNPPKIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI--IL 178
G ++E++ + G+ +D LE +S++T QN FS ++ N I
Sbjct: 211 GQGSDEKISEALAMQRYATQKGIPIEDTILEDKSVNTLQNMIFSKKIMDNSTPNTYASIF 270
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V++ +HL R+ ++ + G+ ++ S +A ++L ++EYI ++ Y
Sbjct: 271 VTNNFHLFRAGIFARKAGLKSQGIGS-----------RTAFYFLPNAMIREYIAFVVMY 318
>gi|309972903|gb|ADO96104.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 247
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 20/244 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFML--LFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+ L++ L +K+ F+ + +L + P L+
Sbjct: 15 PLNTFVLLIIAAILYRVHFKKLAKFIAFIGFTWLYIMSAPFTGLLLT----DNDDTPALT 70
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K IV+LG G+ + A S Q R+ L Q ++ +
Sbjct: 71 LDDYKQAQAIVILGGGSYPTKELYAETASGSPQ-LERLRYAAFL-----QKETGLPVLTT 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G++E + +L +E ++ +T +NA F+ +++ + IILV
Sbjct: 125 --GYSLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILIKDHIQKIILV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGIL 234
++ +H+KR++ F+ G + + + + S IP + LKE+IG
Sbjct: 182 TNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYW 241
Query: 235 IAYY 238
A+Y
Sbjct: 242 KAHY 245
>gi|77461176|ref|YP_350683.1| hypothetical protein Pfl01_4955 [Pseudomonas fluorescens Pf0-1]
gi|77385179|gb|ABA76692.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 259
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/235 (18%), Positives = 89/235 (37%), Gaps = 17/235 (7%)
Query: 17 CQSIRKIFFMSCFMLL--FSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLG 73
+S ++ + + F + ++ K L+ + + IV+LG
Sbjct: 28 RRSRPRLAGLCFALGFGGFWLMSLPVVVQWGAKALEREPPLARDSWASLAQRADAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+G + +P+ R RL K+ I+ SGG E+ +
Sbjct: 88 SGRERGD-LAWGEDQPTGVGLERQRYAARLAKA-----SGLPILTSGGLHYGTPPTEAKL 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L + E +S T++NA+FS+ ++ K I+LV+ A+H+ R+ +Q
Sbjct: 142 MADSLRDDFGVTVR-WQEGESRTTWENAEFSAKVLLPEGVKRIVLVTQAWHMPRAVWSYQ 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA--YYRGN 241
G + +L + +P + + + + E +G + +YRG
Sbjct: 201 QAGFEVVPAPVGFLGTDNARPFGGWLPEFKSIWQSGQLMNEAVGQIGYSLFYRGG 255
>gi|68250305|ref|YP_249417.1| hypothetical protein NTHI2008 [Haemophilus influenzae 86-028NP]
gi|145633636|ref|ZP_01789363.1| hypothetical protein CGSHi3655_00981 [Haemophilus influenzae 3655]
gi|148825756|ref|YP_001290509.1| hypothetical protein CGSHiEE_03525 [Haemophilus influenzae PittEE]
gi|229845236|ref|ZP_04465369.1| hypothetical protein CGSHi6P18H1_02444 [Haemophilus influenzae
6P18H1]
gi|229847322|ref|ZP_04467424.1| hypothetical protein CGSHi7P49H1_00484 [Haemophilus influenzae
7P49H1]
gi|68058504|gb|AAX88757.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|144985513|gb|EDJ92329.1| hypothetical protein CGSHi3655_00981 [Haemophilus influenzae 3655]
gi|148715916|gb|ABQ98126.1| hypothetical protein CGSHiEE_03525 [Haemophilus influenzae PittEE]
gi|229809747|gb|EEP45471.1| hypothetical protein CGSHi7P49H1_00484 [Haemophilus influenzae
7P49H1]
gi|229811831|gb|EEP47527.1| hypothetical protein CGSHi6P18H1_02444 [Haemophilus influenzae
6P18H1]
Length = 247
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 20/244 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+ L++ + C +K+ F + +L + P L+
Sbjct: 15 PLNTFVLLIIAAIIYCVHFKKLAKFLAIISFTWLYIMSVPFTGLLLT----NNDDSPALT 70
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K IV+LG G+ + A R+ L Q I+ +
Sbjct: 71 LDEYKQAQAIVILGGGSYQTKELYAETAS-GAPQLERLRYAAFL-----QKETGLPILTT 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G++E + +L +E ++ +T +NA F+ +++ + IILV
Sbjct: 125 --GYSLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILVKDHIQKIILV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGIL 234
++ +H+KR++ F+ G + + + + S IP + LKE+IG
Sbjct: 182 TNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYW 241
Query: 235 IAYY 238
A+Y
Sbjct: 242 KAHY 245
>gi|146292475|ref|YP_001182899.1| hypothetical protein Sputcn32_1372 [Shewanella putrefaciens CN-32]
gi|145564165|gb|ABP75100.1| protein of unknown function DUF218 [Shewanella putrefaciens CN-32]
gi|319425777|gb|ADV53851.1| protein of unknown function DUF218 [Shewanella putrefaciens 200]
Length = 231
Score = 92.5 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 103/240 (42%), Gaps = 12/240 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M + +I L++ + + + ++ +L F+ + + L++ L+ Y ++
Sbjct: 1 MPIPFILLLLLVSLFIWRRTMAKYLVASAFILLLFLSSQLSVSTLVRPLESIYP---INS 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++LG+ + I A++ S + +R+ E +R C +I+SG
Sbjct: 58 TPISGQCFVMVLGSSHSDIQAATAVQ-SLSAVALARLSEGIR----QLGLGQDCILIVSG 112
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ ++ + + +E GV++ I + DT + AQ+ + + LV+
Sbjct: 113 WGGELTQISHAEMMAKAAVELGVDKSKIIQFPLARDTLEEAQYLKW---ELGDSSFRLVT 169
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H+ R+ F G+ A+ +D+ + + N ++ A+ EYIG L + +
Sbjct: 170 SASHMPRAMAIFTGKGLLASAAPTDFRARDDFWWRLTADNLVSSQRAIHEYIGRLWLWIK 229
>gi|94499865|ref|ZP_01306401.1| hypothetical protein RED65_15127 [Oceanobacter sp. RED65]
gi|94428066|gb|EAT13040.1| hypothetical protein RED65_15127 [Oceanobacter sp. RED65]
Length = 256
Score = 92.5 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 105/250 (42%), Gaps = 21/250 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQS--------IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS 52
M LS + +++S +L +S +L W + T LL++++ +
Sbjct: 16 MPLSLVVVMLSVATVLLWRQNNLNKPIKTARALLSLALLSLLLFSWHPVTTPLLRNIEQT 75
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y K+ + +++LGN P++P + S + +R+ E +R+ +
Sbjct: 76 YSGF----DIKQPVDYVIVLGNKVESDPSVP-LTSHLSSSATARLMEGLRILNANPNGK- 129
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+I G + + + VY + G++ I + DT + A ++ + N +
Sbjct: 130 ----LIVTGYASGNSKSSAQVYKEVAIAMGIDESRIIALEEPKDTVEEANAVANALNNHK 185
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL---NAYYSIIPLSANFYLTELALKE 229
NI+LV+SA H+ R+ ++FQ + + + + + ++ SA E A+ E
Sbjct: 186 DLNIVLVTSASHMPRAIIFFQSYFPDIQPAPTFFIAKHTESTDWRFDSAGLLKAERAIYE 245
Query: 230 YIGILIAYYR 239
Y+G +
Sbjct: 246 YLGQAWQWLT 255
>gi|145588430|ref|YP_001155027.1| hypothetical protein Pnuc_0242 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046836|gb|ABP33463.1| protein of unknown function DUF218 [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 272
Score = 92.5 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 83/219 (37%), Gaps = 15/219 (6%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
+GW + L+ L+ + + LS D I++LG P S
Sbjct: 54 IVGWLPSSEVFLRALENAVPKTNLSQIADSDIGGIIILGGAIQSGMIGLDRGEVPLQSSA 113
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD---DIKLE 151
R+ + + L + + G GL+E+ + + E G+ ++ E
Sbjct: 114 ERVTKALELIRKYPNLPFIFSGY--SGRLNPKGLSEADAFKQLIAEQGLSQETEKTAHYE 171
Query: 152 TQSLDTFQNAQFSSSMIKNMQ-------GKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
QS +T++N + M+++ + +L++SA H+ R++ FQ GI
Sbjct: 172 NQSRNTYENVLYLRPMMQDFGARSESGAIQPWLLITSASHMYRAEKIFQMQGIEVIPVPV 231
Query: 205 DYLNA---YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
DY A ++ L + E +G+L + G
Sbjct: 232 DYQTANSLNWTSFDLEDGTQNWHKLVHEVVGLLAYWITG 270
>gi|296272332|ref|YP_003654963.1| hypothetical protein Arnit_0792 [Arcobacter nitrofigilis DSM 7299]
gi|296096506|gb|ADG92456.1| protein of unknown function DUF218 [Arcobacter nitrofigilis DSM
7299]
Length = 235
Score = 92.5 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 83/223 (37%), Gaps = 31/223 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + + I + L+ L+ Y I+LLG
Sbjct: 36 KKAKVSLFLGLAFIFLISNSVFSNFLISPLENQY--KNQKNIDISKVEYILLLGG----- 88
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
SR +E ++L K II+ G K +++++ N+L+
Sbjct: 89 ------------DFESRAYEVIKLSLKLKDTK-----IITSGYAGKKLISDALYAKNELI 131
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ + I ++ + DT + A +I N ILV+SAYH+ R+ F+ G+N
Sbjct: 132 SLGINENRIIMQDKPKDTIEEAISIKKLINNKPF---ILVTSAYHMPRAMKIFKMQGLNP 188
Query: 200 KASCSDY---LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A +++ S + + +A+ EYIG+ +
Sbjct: 189 IAMPTNFMAKKQKSNSYL-SIKDLKKVSIAIHEYIGLAWLKIK 230
>gi|171059762|ref|YP_001792111.1| hypothetical protein Lcho_3086 [Leptothrix cholodnii SP-6]
gi|170777207|gb|ACB35346.1| protein of unknown function DUF218 [Leptothrix cholodnii SP-6]
Length = 255
Score = 92.5 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 87/226 (38%), Gaps = 12/226 (5%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLSPQWKKDGNIIVLLGNGT 76
+ + +L++ + LL+ L+ + L ++L G
Sbjct: 33 RRSTGAGLWAGMLLVYLAFATPLGGNALLRPLEDRAREAAALCLADGPPPTTAIVLAGGV 92
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ P + S R ++ +++SGG + E+++
Sbjct: 93 DAGASQPGDYQFLTEGSLRRTVAAAHWARA----DDTRRLLVSGGHGS---IPEAVLMTR 145
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L + G++ I++++ S +T Q+ + ++ + +Q + +++SA H+ R+ Q G
Sbjct: 146 MLADLGIDSRRIRIDSASTNTAQSGRNIAAQLGPVQAGRVGVITSADHMPRALRELQSQG 205
Query: 197 INTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
I T A DY + ++P + AL EYIG+L
Sbjct: 206 IATCAMPMDYRHVAPILPGHLVPQLTALGKSTRALHEYIGLLKHAL 251
>gi|270261203|ref|ZP_06189476.1| putative membrane protein [Serratia odorifera 4Rx13]
gi|270044687|gb|EFA17778.1| putative membrane protein [Serratia odorifera 4Rx13]
Length = 257
Score = 92.5 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 19/207 (9%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ LL+ ++ Y ++ + N IV+LG G T P A S R+ E
Sbjct: 57 PVADRLLRPIESEY----VTYRGNDQVNYIVVLGGGYTFNPD-WAPSSNLIGNSLPRVTE 111
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+RLY + M T G + L+ + GV R D+ L + +DT Q
Sbjct: 112 GVRLYLAHPGSKMVFT-----GAGGANTLSNAATAARVAESLGVPRSDMVLLDRPMDTEQ 166
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSI 213
A S ++ ILV+SA HL R+ +F+ G++ + ++ LN + +
Sbjct: 167 EALQVSKLVGQQPF---ILVTSANHLPRAMRFFEAKGLHPIPAPANQLAISSRLNIWDRV 223
Query: 214 IPLSANFYLTELALKEYIGILIAYYRG 240
+P + +E A E +G L +G
Sbjct: 224 VPSAMFLGHSERAWYETLGSLWQSLKG 250
>gi|163816062|ref|ZP_02207432.1| hypothetical protein COPEUT_02242 [Coprococcus eutactus ATCC 27759]
gi|158448872|gb|EDP25867.1| hypothetical protein COPEUT_02242 [Coprococcus eutactus ATCC 27759]
Length = 282
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 91/253 (35%), Gaps = 45/253 (17%)
Query: 1 MLLSWIFLIVSYWHLLC------------QSIRKIFFMSCFMLLFSFIGWGIIPTILLKH 48
+L + +F +++ + + + KI L+ + ++
Sbjct: 62 LLGTGVFALLTLYGVFRAKINKSVRKLWDKKAGKICLSIVLALVTIALALVVV------- 114
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
+Y + K +V+LG PS R+
Sbjct: 115 --ITYHMVYAAHVKPKQDATVVVLGCAVRGGG--------PSLMLRERLIAAQDYLDENP 164
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ ++SGG ++E+ L E G+ + I +E +S T +N +FS+ +I
Sbjct: 165 EAVC----VVSGGQGADESMSEAQCMYEYLTEHGISPERIYMEDKSTSTRENIKFSAQII 220
Query: 169 KNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ + + +V++ +H R++ + GI+T + + + ++P +
Sbjct: 221 EQNDLPDGMNIVTNEFHEYRAKRIAEKQGIDTGSIA---GSTAWWLLP--------TYYV 269
Query: 228 KEYIGILIAYYRG 240
+E GIL + G
Sbjct: 270 REMAGILYEWISG 282
>gi|145641039|ref|ZP_01796620.1| hypothetical protein CGSHiR3021_08216 [Haemophilus influenzae
R3021]
gi|145274200|gb|EDK14065.1| hypothetical protein CGSHiR3021_08216 [Haemophilus influenzae
22.4-21]
Length = 247
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 20/244 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+ L++ + C +K+ F + +L + P L+
Sbjct: 15 PLNTFVLLIIAAIIYCVHFKKLAKFLAIISFTWLYIMSAPFTGLLLT----NNDDSPALT 70
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K IV+LG G+ + A R+ L Q I+ +
Sbjct: 71 LDEYKQAQAIVILGGGSYPTKELYAETAS-GAPQLERLRYAAFL-----QKETGLPILTT 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G++E + +L +E ++ +T +NA F+ +++ + IILV
Sbjct: 125 --GYSLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILIKDHIQKIILV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGIL 234
++ +H+KR++ F+ G + + + + S IP + LKE+IG
Sbjct: 182 TNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYW 241
Query: 235 IAYY 238
A+Y
Sbjct: 242 KAHY 245
>gi|332968000|gb|EGK07087.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 190
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 77/221 (34%), Gaps = 33/221 (14%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R ++ L+F+ L+ R + ++LG
Sbjct: 2 KKRWLWSGVILCLIFAL---------LIIPFWVQASRYDDVRVADHPRDAALVLGAALW- 51
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+PS R+ + LY + II G G++E+ L
Sbjct: 52 -------DSQPSPALRERLQMALSLYHKGQVQW-----IICSGGVGDDGISEAEGMKRYL 99
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+E GV D+ LE +S +T +N Q+S ++K +NI LV+ YH+ RS + GI
Sbjct: 100 MEQGVPPKDLLLEEESTNTKENLQYSKKLLKPNDIQNIYLVTHDYHMYRSLALARQAGIR 159
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + S+ + +E + I+
Sbjct: 160 AEPAPV-----------HSSVLFTPYYKARECLSIIKYRLT 189
>gi|229592788|ref|YP_002874907.1| hypothetical protein PFLU5409 [Pseudomonas fluorescens SBW25]
gi|229364654|emb|CAY52578.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 253
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 77/230 (33%), Gaps = 13/230 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW-KKDGNIIVLLG 73
+ + + I + + L+ + + IV+LG
Sbjct: 28 RRSRPRLAAVCFALGLGGMWLISLPVAVEWGARALESEPPLAREDWSTLAQRADAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+G +P+ R RL K+ ++ +GG +E+ +
Sbjct: 88 SGRERGDPAW-GTDQPTGIGLERQRYAARLAKA-----SGLPVLTTGGLHYGTPPSEAAL 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + E +S T++NAQ S+ ++ K +++V+ A+H+ RS F+
Sbjct: 142 MAVSMQDDFGVTVR-WKEERSRTTWENAQMSAEILLPEGIKRVVVVTQAWHMPRSVWSFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G + +L +P + + + + E +G +
Sbjct: 201 KAGFTVVPAPVGFLGVDNARPLGGWMPEFKSVWQSGQLINEAVGQIGYRL 250
>gi|30021293|ref|NP_832924.1| hypothetical protein BC3183 [Bacillus cereus ATCC 14579]
gi|29896847|gb|AAP10125.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
Length = 343
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 99/236 (41%), Gaps = 27/236 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ FL++S + I + +L S + + L + + + RP
Sbjct: 105 IFLSFFLVISLVEPINFFPEAIRTLYWGAVLISLYLFIDLSNFLTAYFLYQFNRP----- 159
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + + I++LG+G P + SRI + YK + S II SGG
Sbjct: 160 -KYNQDFIIVLGSGLINDKVPPLL--------ASRINRAIEFYKKQEAVSSPPKIIFSGG 210
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-- 179
++E+ + +G+ ++ E +S T+QN FS ++++++G +
Sbjct: 211 QGSDENISEAKAMQEYAVNNGIPLENTIKEDRSTTTYQNMLFSKRIMESLKGTQYNCIFS 270
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +H+ R+ LY + G+N++ S +A +Y ++EYI I +
Sbjct: 271 TNNFHVFRAGLYAKIVGLNSQGIGS-----------KTAFYYWPNAMIREYIAIFV 315
>gi|327482395|gb|AEA85705.1| transmembrane protein [Pseudomonas stutzeri DSM 4166]
Length = 257
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 87/228 (38%), Gaps = 16/228 (7%)
Query: 18 QSIRKIFFMSCFMLLF---SFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIVLLG 73
+ CF+ F + I+ + ++ Q IV+LG
Sbjct: 28 RRRSPRLAALCFVTGFTGLWLMSLPIVVEWTARAVEREPALVEARWSQLSGQAGAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G +P + + R+ RL K+ I+ SGG +E+++
Sbjct: 88 AGREQNDPAWGG-DQPGYTALERLRYAARLAKA-----SGLPILTSGGLHYGQPPSEAML 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L LE +S T++NA FS+ M++ + ++LV+SA H+ RS+ F+
Sbjct: 142 GAEVLQRDFGVATR-WLEERSRTTWENALFSAEMLRAAGVERVVLVTSAAHMPRSRWCFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
GI A+ ++ +P S F+ L L E +G+ +
Sbjct: 201 QNGIEVIAAPVGFMGGHNARPLNGWLPESKAFWQNGLLLNEVVGMAVY 248
>gi|300703732|ref|YP_003745334.1| hypothetical protein RCFBP_11417 [Ralstonia solanacearum CFBP2957]
gi|299071395|emb|CBJ42714.1| conserved exported protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 265
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 17/250 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L L + + R ++ L+ +++ LL Q L
Sbjct: 21 PLVLALLAGMVAWRMPRRRRPAGWVLGIALIVAWLAATPWCGRLLASWTHPAQPVRLDAL 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIE--PSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+VLLG + A + E S S R +Y + H+ ++ +
Sbjct: 81 QPHGEGAVVLLGGSRKLAAREYAGQGETALSGLSLER-----TVYAARLAHAARLPVLAT 135
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG PQ G+ E+ + + + G + I ET+S T +NA FS+ M++ + I LV
Sbjct: 136 GGAPQGLGVPEAELMGRLVADLGQDARWI--ETRSATTEENAAFSAPMLRAAGIQRIYLV 193
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYI 231
+ +H+ R++ YF+ G+ + + + S++P + LT AL+E +
Sbjct: 194 THYWHMARARRYFEGQGLIVTPAPCGWGGEVGESPVGGILSLLPRTDGLALTRSALREAL 253
Query: 232 GILIAYYRGN 241
G L R
Sbjct: 254 GQLWLSMRQG 263
>gi|33152025|ref|NP_873378.1| hypothetical protein HD0881 [Haemophilus ducreyi 35000HP]
gi|33148247|gb|AAP95767.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 248
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/239 (18%), Positives = 84/239 (35%), Gaps = 18/239 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ ++LI + F + + + T L L LS
Sbjct: 18 IALLWLISLLFAYFNYKKLSYCFTAFGIFMLYLFSTPYFATKLGNSL---VIADQLSLAD 74
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G + A + ++ R+ L Q ++ +G
Sbjct: 75 YQTAQAIVVLGGGIRDSQELFAPIST-NGTTFERMRYAAYL-----QKQTGLPLLATGSA 128
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +E+ + + + + LE + T +NAQFS ++ N IILV+
Sbjct: 129 INGN--SEANIMAKEFAQF-FAVETSWLEENAKTTQENAQFSYEILANANINKIILVTHQ 185
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGILI 235
+H++R++ F+ G + Y IP S + KE++G L
Sbjct: 186 WHMQRAKKLFEQQGFKVLPASVGYGVTPNVYFDFSYFIPQSGAMDSVMQSFKEWLGYLK 244
>gi|16273588|ref|NP_439843.1| hypothetical protein HI1701 [Haemophilus influenzae Rd KW20]
gi|260581042|ref|ZP_05848864.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1176139|sp|P44292|Y1701_HAEIN RecName: Full=Uncharacterized protein HI_1701
gi|1574555|gb|AAC23347.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092282|gb|EEW76223.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 247
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 20/244 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+ L++ + C +K+ F + +L + P L+
Sbjct: 15 PLNTFVLLIIAAIIYCVHFKKLAKFIAIISFTWLYIMSAPFTGLLLT----NNDDSPALT 70
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K IV+LG G+ + A R+ L Q I+ +
Sbjct: 71 LDEYKQAQAIVILGGGSYQTKELYAETAS-GAPQLERLRYAAFL-----QKETGLPILTT 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G++E + +L +E ++ +T +NA F+ +++ + IILV
Sbjct: 125 --GYSLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILIKDHIQKIILV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGIL 234
++ +H+KR++ F+ G + + + + S IP + LKE+IG
Sbjct: 182 TNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYW 241
Query: 235 IAYY 238
A+Y
Sbjct: 242 KAHY 245
>gi|217969248|ref|YP_002354482.1| hypothetical protein Tmz1t_0817 [Thauera sp. MZ1T]
gi|217506575|gb|ACK53586.1| protein of unknown function DUF218 [Thauera sp. MZ1T]
Length = 259
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 88/236 (37%), Gaps = 19/236 (8%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
L + + F + L + + L+ +++ +L ++ IV
Sbjct: 33 GLITLRRRPRLGLAFAWAGVALNLLLIFPPSVGWLVARVEYP---QMLDRARAREAQAIV 89
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G + + R+ L + + +++SGG P
Sbjct: 90 VLGAGKRTHAPEFGGE-TVNRLALERLRYAAALARETR-----LPVLVSGGAPAGDTPEA 143
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
++ E GV +E+ S DT +NA+FS+ ++ K I+LV+ A H++R++
Sbjct: 144 YLMEALLRDEYGVPPR--WVESASRDTRENARFSAVHLQAAGVKRILLVTHAMHMERARP 201
Query: 191 YFQHFGINTKASCSDYLNA--------YYSIIPLSANFYLTELALKEYIGILIAYY 238
F+ G++ + + +L P Y AL E +G L +
Sbjct: 202 EFEAAGLDVIPAPTAWLGGGDSPGDAQPLPFAPSQNTAYAAWFALHELLGRLAYRW 257
>gi|146284078|ref|YP_001174231.1| transmembrane protein [Pseudomonas stutzeri A1501]
gi|145572283|gb|ABP81389.1| probable transmembrane protein [Pseudomonas stutzeri A1501]
Length = 257
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 87/228 (38%), Gaps = 16/228 (7%)
Query: 18 QSIRKIFFMSCFMLLF---SFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIVLLG 73
+ CF+ F + I+ + ++ Q IV+LG
Sbjct: 28 RRRSPRLAALCFVTGFTGLWLMSLPIVVEWTARAVEREPALVEARWSQLSGQAGAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G +P + + R+ RL K+ I+ SGG +E+++
Sbjct: 88 AGREQNDPAWGG-DQPGYTALERLRYAARLAKA-----SGLPILTSGGLHYGQPPSEAML 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L LE +S T++NA FS+ M++ + ++LV+SA H+ RS+ F+
Sbjct: 142 GAEVLQRDFGVATR-WLEERSRTTWENALFSAEMLRAAGVERVVLVTSAAHMPRSRWCFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
GI A+ ++ +P S F+ L L E +G+ +
Sbjct: 201 QNGIEVIAAPVGFMGGHNARPLDGWLPESKAFWQNGLLLNEVVGMAVY 248
>gi|270157480|ref|ZP_06186137.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289164131|ref|YP_003454269.1| hypothetical protein LLO_0787 [Legionella longbeachae NSW150]
gi|269989505|gb|EEZ95759.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288857304|emb|CBJ11131.1| hypothetical protein LLO_0787 [Legionella longbeachae NSW150]
Length = 197
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + F L+ S + + ++++ + KK ++I++LG
Sbjct: 2 KTLMQVFIFFLILSAGIYFSLALYIIRNAEK---------DEKKHADVIIVLG------- 45
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
T + + +R+ + LYK+ ++ SGG K+G +E+ V L
Sbjct: 46 TKSYHGDKYNPCLVARVQHAVDLYKAN----YAPKLLFSGGKDTKNGPSEAQVMKEIALH 101
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV DI LE+ S T++N FS ++ + +I+LV+ +HL R+ L Q G+
Sbjct: 102 LGVSEQDILLESASASTYENLLFSEKIVSAKKFNSILLVTEPFHLPRAILVAQKLGLKVS 161
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S + + N Y + L+E + I+ +
Sbjct: 162 GSPA------IQSLCWQKNSYFSRHFLREPLAIIYYKIK 194
>gi|315126918|ref|YP_004068921.1| enzyme [Pseudoalteromonas sp. SM9913]
gi|315015432|gb|ADT68770.1| enzyme [Pseudoalteromonas sp. SM9913]
Length = 258
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 83/232 (35%), Gaps = 17/232 (7%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
L Q I + ++ +L+K+ + + + IV+L
Sbjct: 31 IFALKQRKVAIAISLMSLATLLIASTPLVANLLIKN--SQPTSLAFNYLKHPNIDKIVVL 88
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G P + A + + +R+ E MRL +I+SGG + S
Sbjct: 89 GCDINPNPALSA-NSQLGNCALTRLVEGMRLANIYPH----AQLIVSGGGY--EKVTNSA 141
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ + G+ ++ I ++ AQ + + + + LV+S H+ R++ F
Sbjct: 142 LMYKTAISLGINKNRIVQNPNAM---DTAQEAKLLASKLVDYKVALVTSVSHMPRAKNLF 198
Query: 193 QHFGINTKASCSDYLN----AYYS-IIPLSANFYLTELALKEYIGILIAYYR 239
GIN + +DY N +Y +IP + + E IG R
Sbjct: 199 NAQGINVIPASTDYHNFAAFPWYKQLIPNAKALLVVTQYAHEVIGNAWINVR 250
>gi|187934001|ref|YP_001887179.1| integral membrane protein [Clostridium botulinum B str. Eklund 17B]
gi|187722154|gb|ACD23375.1| integral membrane protein [Clostridium botulinum B str. Eklund 17B]
Length = 348
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 44/239 (18%), Positives = 97/239 (40%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ I+ + ++ + F+LL+ + L+ + + +P L
Sbjct: 108 LIFYLIWSFAISNWNFPEEVKVLLGGINFVLLYYLFD---VFNFLMISFLYQFNKPKL-- 162
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G P + SRI + + Y + II SG
Sbjct: 163 ----CQDFIIVLGSGLIGERVPPLL--------ASRIDKAIEFYNKQGAVTNPPKIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--L 178
G ++E++ ++ G+ ++ LE +S++T QN FS ++ N
Sbjct: 211 GQGSDEKISEALAMQRYAVQKGIPIENTILEDKSVNTLQNMMFSKKIMDNSTPNTHTSIF 270
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V++ +HL R+ ++ + G+ ++ S +A ++L ++EYI ++ Y
Sbjct: 271 VTNNFHLFRAGIFARKAGLKSQGIGS-----------KTAFYFLPNAMIREYIAFVVMY 318
>gi|83748341|ref|ZP_00945365.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|207723927|ref|YP_002254325.1| hypothetical protein RSMK01443 [Ralstonia solanacearum MolK2]
gi|83724963|gb|EAP72117.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|206589134|emb|CAQ36096.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 265
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 96/250 (38%), Gaps = 17/250 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L L + + R ++ L+ +++ LL Q L
Sbjct: 21 PLVLALLAGMVAWRMPRRRRPAGWVLGIALIVAWLAATPWCGRLLASWTHPAQPVRLDAL 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIE--PSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+VLLG + A + E S S R +Y + H+ ++ +
Sbjct: 81 QPHGEGAVVLLGGSRKLAAREYAGQGETALSGLSLER-----TVYAARLAHAARLPVLAT 135
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG P+ G+ E+ + + + G + I E +S T +NA FS+ M++ + I LV
Sbjct: 136 GGAPEGRGVPEAELMGRLVADLGQDARWI--EARSATTEENAAFSAPMLRAAGIQRIYLV 193
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYI 231
+ +H+ R++ YF+ G+ + + S++P + LT AL+E +
Sbjct: 194 THYWHMARARRYFEGQGLIVTPAPCGWGGELEERPAGGILSLLPRTDGLALTRSALREAL 253
Query: 232 GILIAYYRGN 241
G L R
Sbjct: 254 GQLWLSMRQG 263
>gi|148827124|ref|YP_001291877.1| hypothetical protein CGSHiGG_02255 [Haemophilus influenzae PittGG]
gi|148718366|gb|ABQ99493.1| molybdate ABC transporter permease protein [Haemophilus influenzae
PittGG]
Length = 247
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 93/240 (38%), Gaps = 17/240 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+++ LI++ L + F+ + +I +LL + P L+
Sbjct: 18 TFVLLIIAAILYLVHFKKLAKFIVLISFTWLYIMSAPFTGLLLT---DNDDIPALTLDEY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G+ + A R+ L Q I+ +
Sbjct: 75 KQAQAIVILGGGSYPTKELYAETAS-GAPQLERLRYAAFL-----QKETGLPILTT--GY 126
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G++E + +L +E ++ +T +NA F+ +++ + IILV++ +
Sbjct: 127 SLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILIKDHIQKIILVTNQW 185
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIAYY 238
H+KR++ F+ G + + + + S IP + LKE+IG A+Y
Sbjct: 186 HMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|281490953|ref|YP_003352933.1| hypothetical protein LLKF_0463 [Lactococcus lactis subsp. lactis
KF147]
gi|281374711|gb|ADA64231.1| Hypothetical protein LLKF_0463 [Lactococcus lactis subsp. lactis
KF147]
Length = 194
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 79/221 (35%), Gaps = 30/221 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + F+ L I + IL K + + D I++LG+
Sbjct: 2 KKFFKIIGAFVGLILLISVICLALILSKS-------TDRTAENSTDIKTILVLGSRINQN 54
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P+ + R+ + L K+ Q II+SG ++E+ N L+
Sbjct: 55 KK-------PAKITQERLDAALLLAKNNPQ----AKIIVSGAKGADEPVSEAFSMKNYLI 103
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ D I E ++ DT +N +S K ++V+S +HL R+ +H G+
Sbjct: 104 SHHIRADRIISEDKAGDTAENIAYS----KKYFDGKTVIVTSDFHLYRALYLAKHEGVKV 159
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + P E +G++ A+ G
Sbjct: 160 EGFAAKTKVNNLLYYPNYYG--------HEILGLIYAFVFG 192
>gi|301170456|emb|CBW30063.1| conserved hypothetical protein [Haemophilus influenzae 10810]
Length = 247
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 20/244 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+ L++ + C +K+ F + +L + P L+
Sbjct: 15 PLNTFVLLIIAAIIYCVHFKKLAKFLAIISFTWLYIMSAPFTGLLLT----DNDDIPALT 70
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K IV+LG G+ + A R+ L Q I+ +
Sbjct: 71 LDEYKQAQAIVILGGGSYPTKELYAETAS-GAPQLERLRYAAFL-----QKETGLPILTT 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G++E + +L +E ++ +T +NA F+ +++ + IILV
Sbjct: 125 --GYSLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILIKDHIQKIILV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGIL 234
++ +H+KR++ F+ G + + + + S IP + LKE+IG
Sbjct: 182 TNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYW 241
Query: 235 IAYY 238
A+Y
Sbjct: 242 KAHY 245
>gi|304397080|ref|ZP_07378959.1| protein of unknown function DUF218 [Pantoea sp. aB]
gi|304355229|gb|EFM19597.1| protein of unknown function DUF218 [Pantoea sp. aB]
Length = 260
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 42 PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
LL L Y + + + IV+LG G T P A S R+ E +
Sbjct: 59 ADRLLLPLDSRYPTW----KGAEKVDYIVVLGGGYTFNPG-WAPSSNLLNNSLPRVAEGV 113
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
R ++ Q T+I +G + + + V GV + I++ Q DT A
Sbjct: 114 RQWRRNPQS----TLIFTGAAGGTNPKSSAWVAAQVAESLGVPHEHIQILDQPRDTADEA 169
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSIIP 215
Q ++ N +LV+SA H+ R+ +F G+ A+ ++ LN + IP
Sbjct: 170 QAVKTVAGNRPL---MLVTSANHMPRAIRFFHAVGLKPIAAPANQLAITSPLNGWERAIP 226
Query: 216 LSANFYLTELALKEYIGILIAYYR 239
S +E A+ E +G L+ +
Sbjct: 227 SSIWLSHSERAVYETLGTLLQRLK 250
>gi|251792809|ref|YP_003007535.1| molybdate ABC transporter permease [Aggregatibacter aphrophilus
NJ8700]
gi|247534202|gb|ACS97448.1| molybdate ABC transporter permease protein [Aggregatibacter
aphrophilus NJ8700]
Length = 248
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 19/224 (8%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ + + + L L L+ + IVLLG G
Sbjct: 35 KVFSRLCAFLGIAILYVVSIPYTAQTLKDSLITE---DHLTLNDYRQAQAIVLLGGGVRD 91
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ A + S R+ L Q ++IS G +E+ V +L
Sbjct: 92 SKELYAP-LASSAVQLERLRYAAYL-----QKETQLPLLIS--GVSPTGASEAKVSMQEL 143
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ LE +SL T +NA F+ +++ IILV++ +H++R++L F+ G
Sbjct: 144 QDF-FNVPTQWLEEKSLTTKENALFTRQLLEKEGINKIILVTNEWHMQRAKLLFEEQGFQ 202
Query: 199 TKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ ++Y IP + LKE++G L
Sbjct: 203 VLPASVGEGVTPTEYKLNMMHFIPQAGAMAKNMQLLKEWLGYLK 246
>gi|145631591|ref|ZP_01787357.1| hypothetical protein CGSHi22421_02276 [Haemophilus influenzae
R3021]
gi|144982791|gb|EDJ90317.1| hypothetical protein CGSHi22421_02276 [Haemophilus influenzae
R3021]
Length = 247
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 86/240 (35%), Gaps = 18/240 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ +I + + + F + +L + P L+
Sbjct: 19 FVLLIIATILYRVHFKKLAKFLAIISFTWLYIMSAPFTGLLLT----NNDDSPALTLDKY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G+ + A R+ L Q I+ +
Sbjct: 75 KQAQAIVILGGGSYPTKELYAETAS-GAPQLERLRYAAFL-----QKETGLPILTT--GY 126
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G++E + +L +E ++ +T +NA F+ +++ + IILV++ +
Sbjct: 127 SLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILIKDHIQKIILVTNQW 185
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIAYY 238
H+KR++ F+ G + + + + S IP + LKE+IG A+Y
Sbjct: 186 HMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|212694703|ref|ZP_03302831.1| hypothetical protein BACDOR_04235 [Bacteroides dorei DSM 17855]
gi|212662682|gb|EEB23256.1| hypothetical protein BACDOR_04235 [Bacteroides dorei DSM 17855]
Length = 252
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/247 (20%), Positives = 91/247 (36%), Gaps = 17/247 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++I + + +L K ++ LLF G + + + Y RPL
Sbjct: 9 PTTYIVIFLLLGVVLKSKRWKRLCLTLSALLFLLFSNGALYQWIAEQWYKEYDRPL---P 65
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC----TII 117
+K ++LG + + R+ E +RLYK + +II
Sbjct: 66 ERKQYTYGIVLGGYSYWDWKRSRPEF---SEIADRLLEGIRLYKHGCIRKLVLASDGSII 122
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
S G + L + G+ +D+ LET++ +T++NA F+ +I N
Sbjct: 123 ESKDGKGLQG--NAADMKQYLADLGMPLEDVILETRANNTWENATFTLELIGNSMKTEST 180
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS----IIPLSANFYLTELALKEYIG 232
L++SA H++RS F G+N +D +P E++G
Sbjct: 181 LLITSATHMRRSLWTFHAAGLNPDTYITDTFPEIKGEKTNFLPSWHVLASWPELTHEWVG 240
Query: 233 ILIAYYR 239
L R
Sbjct: 241 YLYYRLR 247
>gi|157273409|gb|ABV27308.1| conserved hypothetical protein [Candidatus Chloracidobacterium
thermophilum]
Length = 256
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 79/236 (33%), Gaps = 18/236 (7%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII--V 70
W Q K + L + + G LL L+ + + I +
Sbjct: 30 WFSRWQRAGKTVTTVAAIGL-AVVSHGWTANALLAPLEQGQVMFAPLGEIPPEAQSIRWI 88
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
++ G S S R+ E +RL++ +++ G
Sbjct: 89 VVLGGGVGGDEHMPPTECLSDASLRRLVEGIRLHRLLPSAR-----LVTSGGAVFTMRPA 143
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
V + GV D I ++ +T + + +++ + +LV+SA H+ R+
Sbjct: 144 GEVMRDAACALGVSADRIVVQPIGRNTVEEVAAVARLVEQ---EPFLLVTSAVHMPRALE 200
Query: 191 YFQHFGINTKASCSDYLN-------AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ G+ + +D+ + P A +E A+ EY+G L R
Sbjct: 201 ACRKQGLRPLPAPTDFQATEPDGVWTPGDLYPSGAGLRQSERAMYEYLGHLRQRLR 256
>gi|145635442|ref|ZP_01791143.1| hypothetical protein CGSHiAA_03441 [Haemophilus influenzae PittAA]
gi|145267316|gb|EDK07319.1| hypothetical protein CGSHiAA_03441 [Haemophilus influenzae PittAA]
Length = 247
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/244 (18%), Positives = 90/244 (36%), Gaps = 20/244 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+ L++ + C +K+ F + +L + P L+
Sbjct: 15 PLNTFVLLIIAAIIYCVHFKKLAKFLAIISFTWLYIMSAPFTGLLLT----DNDDIPALT 70
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K IV+LG G+ + A R+ L Q I+ +
Sbjct: 71 LDEYKQAQAIVILGGGSYPTKELYAETAS-GAPQLERLRYAAFL-----QKETGLPILTT 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G++E + +L +E ++ +T +NA F+ +++ + IILV
Sbjct: 125 --GYSLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILIKDHIQKIILV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGIL 234
++ +H+KR++ F+ G + + + + S +P + LKE+IG
Sbjct: 182 TNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFVPDLGALNSNMVLLKEWIGYW 241
Query: 235 IAYY 238
A+Y
Sbjct: 242 KAHY 245
>gi|299822466|ref|ZP_07054352.1| conserved domain protein [Listeria grayi DSM 20601]
gi|299815995|gb|EFI83233.1| conserved domain protein [Listeria grayi DSM 20601]
Length = 339
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 100/236 (42%), Gaps = 27/236 (11%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
I +I LL + + +L+ ++ + LL + + Y P L
Sbjct: 105 VLIIVIGVLTVLLAHPDTWLENIVLGLLIIIAYVTFLLVSFLLSTIIYQYNGPRL----- 159
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGD 122
+ + I++LG G + +R+ + ++ ++ K+ T I+SGG
Sbjct: 160 -NKDFIIVLGCGLKGKKVPQLL--------ANRLDKAIQFHRKQQKKRGRTATFIVSGGK 210
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVSS 181
+AE+ L++ G+ ++ I +E S +T +N QFS ++ + + + V++
Sbjct: 211 GPNEEIAEARAMQAYLIDKGIPKEQIFMEADSTNTEENMQFSKKLMTSIQKNFKSVFVTN 270
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+HL R+ +Y + G++ + +A +YL L+E+I +L Y
Sbjct: 271 NFHLFRASIYARKAGLDAQGIG-----------GKTALYYLPTALLREFIAVLFLY 315
>gi|319776039|ref|YP_004138527.1| hypothetical protein HICON_13870 [Haemophilus influenzae F3047]
gi|319896847|ref|YP_004135042.1| hypothetical protein HIBPF05050 [Haemophilus influenzae F3031]
gi|329123197|ref|ZP_08251766.1| hypothetical protein HMPREF9095_0984 [Haemophilus aegyptius ATCC
11116]
gi|317432351|emb|CBY80706.1| conserved hypothetical protein [Haemophilus influenzae F3031]
gi|317450630|emb|CBY86850.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327471542|gb|EGF16986.1| hypothetical protein HMPREF9095_0984 [Haemophilus aegyptius ATCC
11116]
Length = 247
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 20/244 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+ L++ + C +K+ F + +L + P L+
Sbjct: 15 PLNTFVLLIIAAIIYCVHFKKLAKFIALISFTWLYIMSAPFTGLLLT----DNDDIPALT 70
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K IV+LG G+ + A R+ L Q I+ +
Sbjct: 71 LDEYKQAQAIVILGGGSYPTKELYAETAS-GAPQLERLRYAAFL-----QKETGLPILTT 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G++E + +L +E ++ +T +NA F+ +++ + IILV
Sbjct: 125 --GYSLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILIKDHIQKIILV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGIL 234
++ +H+KR++ F+ G + + + + S IP + LKE+IG
Sbjct: 182 TNQWHMKRAKYLFEKQGFDVLPAAAANYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYW 241
Query: 235 IAYY 238
A+Y
Sbjct: 242 KAHY 245
>gi|297180867|gb|ADI17072.1| uncharacterized conserved protein [uncultured alpha proteobacterium
HF0010_30A23]
Length = 273
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/237 (15%), Positives = 89/237 (37%), Gaps = 12/237 (5%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + + + + + + + LL+ L+ + + + +
Sbjct: 28 IRLLNRGIHAWSGKLVQFLALGAVLALFFLPLGSRLLEPLENRFPAYRFQSE-AGRLDGV 86
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD---PQKH 126
++LG + ++ + + + RI + + + + ++GGD ++
Sbjct: 87 IILGGAVDLRASMDSAALIQVGSASDRILTAIEVLAQ-----SNLDLYLTGGDGALTRRV 141
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E+ + L + G + I++E+QS +T ++ Q +Q LV+SA+H+
Sbjct: 142 EVGEAALVAEWLGQQGFDSGRIRVESQSRNTAEHPQALLEEFPELQTGLYGLVTSAFHMP 201
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL---ALKEYIGILIAYYRG 240
R+ F+ GI DY + I E A +E+ G+ + G
Sbjct: 202 RAVGVFRKSGIAVVPIPVDYRSDRGRAIVFGQGIVEWERFALAAREWGGLFFYFALG 258
>gi|237711018|ref|ZP_04541499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265750614|ref|ZP_06086677.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229454862|gb|EEO60583.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263237510|gb|EEZ22960.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 252
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/247 (20%), Positives = 92/247 (37%), Gaps = 17/247 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++I + + +L K ++ LLF G + + + Y RPL
Sbjct: 9 PTTYIVIFLLLGVVLKSKRWKRLCLTLSALLFLLFSNGALYQWIAEQWYKEYDRPL---P 65
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC----TII 117
+K ++LG + + R+ E +RLYK + + +II
Sbjct: 66 ERKQYTYGIVLGGYSYWDWKRSRPEF---SEIADRLLEGIRLYKHGRIRKLVLASDGSII 122
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
S G + L + G+ +D+ LET++ +T++NA F+ +I N
Sbjct: 123 ESKDGKGLQG--NAADMKQYLADLGMPLEDVILETRANNTWENATFTLELIGNSMKTEST 180
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS----IIPLSANFYLTELALKEYIG 232
L++SA H++RS F G+N +D +P E++G
Sbjct: 181 LLITSATHMRRSLWTFHAAGLNPDTYITDTFPEIKGEKTNFLPSWHVLASWPELTHEWVG 240
Query: 233 ILIAYYR 239
L R
Sbjct: 241 YLYYRLR 247
>gi|254479072|ref|ZP_05092426.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
gi|214034988|gb|EEB75708.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
Length = 192
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 29/218 (13%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
F +L+F+ I + F+ + K + I++LG
Sbjct: 3 RFLKLVVVLIFALFSIIAILAYQIVSFGFT--------EKPKKSDAIIVLGCAVYGD--- 51
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
PS R+ E ++LYK H IIISGG ++E+ LLE G
Sbjct: 52 -----TPSPFFKERLEEALKLYKEGYGHY----IIISGGKGPGESISEAEAGKRYLLEKG 102
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V +I L+ +S T++N FS +++ K I+VS+ +HLKR+ + + GI+
Sbjct: 103 VASKNILLDNKSFSTYENLLFSKEIMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDA--- 159
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ + L+E + +L Y RG
Sbjct: 160 ------SFSGVFVKEYVGDEVYGFLREVLALLYTYLRG 191
>gi|307687370|ref|ZP_07629816.1| hypothetical protein Ccel74_04393 [Clostridium cellulovorans 743B]
Length = 254
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 95/241 (39%), Gaps = 29/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + +++ +++L + + F+++F+ L+ ++ S
Sbjct: 40 LILGIVLIVMGFFYLKFDTKLLSYIPKKFLIIFTSFLIIGFSFFLVT---EAFIYKTGSE 96
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G ++++ R+ + + + II+SG
Sbjct: 97 KDNTPTDYVVVLGAGLIGDRISTSLQL--------RLDAALEFHSIHPE----IPIIVSG 144
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GKNII 177
G L+E+ + L+E G++ + I +E +S T++N FS +I N +
Sbjct: 145 GQGPDELLSEARAMKDYLIEKGIDPNLITMEDKSTSTYENFMFSKELISNKCSKTPIKVT 204
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++++ +H R+ + + G + ++E+ G++ ++
Sbjct: 205 VITNNFHQFRANMIAKAQGFEVHGYP-----------GSCHPYSSLNFHVREFPGVIKSF 253
Query: 238 Y 238
Sbjct: 254 I 254
>gi|302876695|ref|YP_003845328.1| hypothetical protein Clocel_3898 [Clostridium cellulovorans 743B]
gi|302579552|gb|ADL53564.1| protein of unknown function DUF218 [Clostridium cellulovorans 743B]
Length = 257
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 95/241 (39%), Gaps = 29/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + +++ +++L + + F+++F+ L+ ++ S
Sbjct: 40 LILGIVLIVMGFFYLKFDTKLLSYIPKKFLIIFTSFLIIGFSFFLVT---EAFIYKTGSE 96
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G ++++ R+ + + + II+SG
Sbjct: 97 KDNTPTDYVVVLGAGLIGDRISTSLQL--------RLDAALEFHSIHPE----IPIIVSG 144
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GKNII 177
G L+E+ + L+E G++ + I +E +S T++N FS +I N +
Sbjct: 145 GQGPDELLSEARAMKDYLIEKGIDPNLITMEDKSTSTYENFMFSKELISNKCSKTPIKVT 204
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++++ +H R+ + + G + ++E+ G++ ++
Sbjct: 205 VITNNFHQFRANMIAKAQGFEVHGYP-----------GSCHPYSSLNFHVREFPGVIKSF 253
Query: 238 Y 238
Sbjct: 254 I 254
>gi|120599528|ref|YP_964102.1| hypothetical protein Sputw3181_2731 [Shewanella sp. W3-18-1]
gi|120559621|gb|ABM25548.1| protein of unknown function DUF218 [Shewanella sp. W3-18-1]
Length = 231
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 102/240 (42%), Gaps = 12/240 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M + +I L++ + + + ++ +L F+ + L++ L+ Y ++
Sbjct: 1 MPIPFILLLLLVSLFIWRRTMAKYLVASAFILLLFLSSQLSVRTLVRPLESIYP---INS 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++LG+ + I A++ S + +R+ E +R C +I+SG
Sbjct: 58 APISGQCFVMVLGSSHSDIQAATAVQ-SLSAVALARLSEGIR----QLGLGQDCILIVSG 112
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ ++ + + +E GV++ I + DT + AQ+ + + LV+
Sbjct: 113 WGGELTQISHAEMMAKAAVELGVDKIKIIQFPLARDTLEEAQYLKW---ELGDSSFRLVT 169
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H+ R+ F G+ A+ +D+ + + N ++ A+ EYIG L + +
Sbjct: 170 SASHMPRAMAIFTGKGLLASAAPTDFRARDDFWWRLTADNLVSSQRAIHEYIGRLWLWIK 229
>gi|116492028|ref|YP_803763.1| hypothetical protein PEPE_0220 [Pediococcus pentosaceus ATCC 25745]
gi|116102178|gb|ABJ67321.1| hypothetical protein PEPE_0220 [Pediococcus pentosaceus ATCC 25745]
Length = 339
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 93/241 (38%), Gaps = 28/241 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L FL + L + + +LL + I + +L Y
Sbjct: 101 LILGLNFLFMLVAGLAILFLNQFLGRFVGILLTLLGIDVTLTFIFVCYL--FYSFLYQVV 158
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + + I++LG G P ++ R+ + + Y+ + I++SG
Sbjct: 159 PIKGNVDYIIVLGAGVRSETVTPLLKG--------RLDKALEYYRRQ---NGAVKIVVSG 207
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKNI 176
G ++E+ L V D I LE QS TF+N QFS I+ I
Sbjct: 208 GQGPDEPVSEAFAMAKYLRNQSVPEDKIILEDQSTTTFENMQFSKQKIEADWQGTQPPQI 267
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I ++ YH+ R +Y + G+N S ++ ++L ++EYI +L+
Sbjct: 268 IFATNNYHVLRGVIYARKAGLNANGVGS-----------PTSFYFLPSALIREYIALLVI 316
Query: 237 Y 237
Y
Sbjct: 317 Y 317
>gi|145637641|ref|ZP_01793296.1| hypothetical protein CGSHiHH_03118 [Haemophilus influenzae PittHH]
gi|145269164|gb|EDK09112.1| hypothetical protein CGSHiHH_03118 [Haemophilus influenzae PittHH]
Length = 247
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/240 (19%), Positives = 92/240 (38%), Gaps = 17/240 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+++ LI++ + F+ + +I +LL + P L+
Sbjct: 18 TFVLLIIATILYRVHFKKLAKFIVLISFTWLYIMSAPFTGLLLT---DNDDIPALTLDEY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G+ + A R+ L Q I+ +
Sbjct: 75 KQAQAIVILGGGSYPTKELYAETAS-GAPQLERLRYAAFL-----QKETGLPILTT--GY 126
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G++E + +L +E ++ +T +NA F+ +++ + IILV++ +
Sbjct: 127 SLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNILIKDHIQKIILVTNQW 185
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIAYY 238
H+KR++ F+ G + + + + S IP + LKE+IG A+Y
Sbjct: 186 HMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|239624750|ref|ZP_04667781.1| exported protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521136|gb|EEQ61002.1| exported protein [Clostridiales bacterium 1_7_47FAA]
Length = 239
Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 76/218 (34%), Gaps = 27/218 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHL--QFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + L+ + G ++ + L + + Y + +D + I++LG G
Sbjct: 2 KKKKIVGKAVRVFLVLALAGCLVLFLVNLYIIRKEEKYIVSAEEARAFEDVDCIMVLGCG 61
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS R+ + + LYK ++ GD K E +
Sbjct: 62 VRPD-------GSPSGMLNDRLVQGISLYKEDVSDR-----LLMSGDHGKVNYDEVNLMK 109
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ GV ++I ++ T+++ + + + + +V+ YH+ R+ Q
Sbjct: 110 QFAIDRGVPSENIFMDHAGFSTYESMYRARDIFQVKKIV---IVTQRYHMYRALYVAQAM 166
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
G+ SD P + L+E +
Sbjct: 167 GMEAYGVASD---------PRTYGGQKMRD-LRELLAR 194
>gi|15602371|ref|NP_245443.1| hypothetical protein PM0506 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720766|gb|AAK02590.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 247
Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 79/224 (35%), Gaps = 19/224 (8%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ + + L LS + IVLLG G
Sbjct: 34 KKLSRLCALLGLTILYIFSLPYTSHKIEDSL---VIEDKLSLADYQQAQAIVLLGGGLRD 90
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ ++ S R+ L ++ + +I G++E+ + N+L
Sbjct: 91 SKELYD-KLTVSAIPLERVRYAAYL----QKQTQLPLLITGS---SPKGISEAQIMANEL 142
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ +E ++ T +NA FS +++ K +I+V++ +H++R++L F+ G
Sbjct: 143 -NTFFSVPTTWVEGKARTTKENALFSREILEKEGIKRVIVVTNQWHMQRAKLLFEQQGFE 201
Query: 199 TKASCSDYLNAY-------YSIIPLSANFYLTELALKEYIGILI 235
+ + + IP + L LKE++G
Sbjct: 202 VLPASVGHGISPQSYGLNVMYFIPQAGALNKNMLLLKEWLGYWK 245
>gi|17546687|ref|NP_520089.1| hypothetical protein RSc1968 [Ralstonia solanacearum GMI1000]
gi|17428986|emb|CAD15670.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 265
Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 94/250 (37%), Gaps = 17/250 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L L + + + L+ +++ LL L
Sbjct: 21 PLVLALLAGTVAWRVPRWRCPACRGLGIALIAAWVAATPWCGRLLASWTHPAPPLRLDAL 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIE--PSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ +VLLG + A + S S R +Y + + H ++ +
Sbjct: 81 QPQGEGAVVLLGGSRKLAAREYAGQGATALSGPSLER-----TVYAARLARAAHLPVLAT 135
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG P+ +G+ E+ + + + G + I ET+S T +NA FS+ M++ + I LV
Sbjct: 136 GGAPEGNGVPEAELMRRLVADMGQDARWI--ETRSATTEENAAFSAPMLRAAGIRRIYLV 193
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYI 231
+ +H+ R++ YF+ G + + S++P + LT AL+E +
Sbjct: 194 THYWHMARARRYFEGQGFTVTPAPCGWGGEVEESPAGGILSLLPRTDGLMLTRFALREAL 253
Query: 232 GILIAYYRGN 241
G L R
Sbjct: 254 GQLWLSIRQG 263
>gi|254369442|ref|ZP_04985454.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122392|gb|EDO66532.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 158
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
++EP+ +Y RI +T +Y Q IIISGG P L+E+ +Y + L + G+
Sbjct: 8 GKLEPTLSAYDRILKTAEVYHQHLQQ-----IIISGGAPFGEKLSEAEIYADVLDKLGIP 62
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I LE S +T+QNA+F ++ N + LV+ H KR+++ F F INT + S
Sbjct: 63 KSKIILEKNSKNTYQNAEFIKKILMNDKNTYC-LVTGGIHYKRAKIIFDKFAINTISIAS 121
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I+P + NFY+T+ + EY+GI+ Y
Sbjct: 122 SKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 155
>gi|326405987|gb|ADZ63058.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 194
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 78/221 (35%), Gaps = 30/221 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + F+ L I + IL K + + D I++LG+
Sbjct: 2 KKTFKIIGAFVGLILLIPVICLALILSKS-------TDRTAENSTDIKTILVLGSRINQN 54
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P+ + R+ + L K+ Q II+SG ++E+ N L+
Sbjct: 55 KK-------PAKITQERLDAALLLAKNNPQ----AKIIVSGAKGADEPVSEAFSMKNYLI 103
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ D I E ++ DT +N +S K ++V+S +HL R+ + G+
Sbjct: 104 THHIRADRIISEDKAGDTAENIAYS----KKYFDGKTVIVTSDFHLYRALYLAKQEGVKV 159
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + P E +G++ A+ G
Sbjct: 160 EGFAAKTKVNNLFYYPNYYG--------HEILGLIYAFVFG 192
>gi|115315002|ref|YP_763725.1| hypothetical protein FTH_1231 [Francisella tularensis subsp.
holarctica OSU18]
gi|167010037|ref|ZP_02274968.1| hypothetical protein Ftulh_04754 [Francisella tularensis subsp.
holarctica FSC200]
gi|115129901|gb|ABI83088.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
Length = 158
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
++EP+ +Y RI +T +Y Q IIISGG P L+E+ +Y + L + G+
Sbjct: 8 GKLEPALSAYDRILKTAEVYHQHLQQ-----IIISGGAPFGEKLSEAEIYADVLDKLGIP 62
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I LE S +T+QNA+F ++ N + LV+ H KR+++ F F INT + S
Sbjct: 63 KSKIILEKNSKNTYQNAEFIKKILMNDKNTYC-LVTGGIHYKRAKIIFDKFTINTISIAS 121
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I+P + NFY+T+ + EY+GI+ Y
Sbjct: 122 SKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 155
>gi|54295467|ref|YP_127882.1| hypothetical protein lpl2553 [Legionella pneumophila str. Lens]
gi|53755299|emb|CAH16793.1| hypothetical protein lpl2553 [Legionella pneumophila str. Lens]
Length = 250
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 105/242 (43%), Gaps = 20/242 (8%)
Query: 3 LSWIFLIVSYWHLLCQ--SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L + L + + L + + +L+ + G +P+ L L+ Y +
Sbjct: 17 LCLLTLGICIFLLYRRLAPTFTKVMLFVVLLVLLAMSTGWLPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G I +PA + + S R+ E +RL+++ + + S
Sbjct: 74 RVNPNVKWVVVLGGGQNIGEEMPANDL-LTSASIKRLIEGVRLFRTLPDAKLLLSGGGSA 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + + +ET S++T A ++++ + LV+
Sbjct: 133 G-----EQSEALLLTELAKWFAIDSEKVVVETASINTADQAHELAAIV---HDQPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKMVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|315283550|ref|ZP_07871714.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
gi|313612811|gb|EFR86789.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
Length = 183
Score = 89.1 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 78/213 (36%), Gaps = 33/213 (15%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ +++ FI I+ + + + + +++LG P
Sbjct: 1 IFLILIVIGFIYLLIVAAFMFSGA---------RAKPNGNADTVLVLGARVNGDPA---- 47
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
EPS R+ + +I+SGG + +E+ V L+ G+ R
Sbjct: 48 --EPSSVLKERLDTAVAYLNENP----TLKVIVSGGQGEDESASEASVMEEYLVNQGIAR 101
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ I +E +S T +N ++S ++V+S YH+ R+ + + G++ +
Sbjct: 102 NRINVEDKSTRTEENLKYSK---GKFNLGKTVIVTSDYHMYRALMLAKRQGVDASGLPAK 158
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+A + ++E + I A+
Sbjct: 159 SQSAGKY-----------KKMMRETLSITYAWV 180
>gi|330505003|ref|YP_004381872.1| hypothetical protein MDS_4089 [Pseudomonas mendocina NK-01]
gi|328919289|gb|AEB60120.1| hypothetical protein MDS_4089 [Pseudomonas mendocina NK-01]
Length = 256
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 87/228 (38%), Gaps = 15/228 (6%)
Query: 18 QSIRKIFFMSCFMLLF---SFIGWGIIPTILLKHLQFSYQRPLLSPQW-KKDGNIIVLLG 73
+ +CF+ F + + L+ + + IV+LG
Sbjct: 28 RRRFPRLAFTCFVTGFGGLWLMSLPAVMQWSAGLLEREPALEEARWATLAQRADAIVILG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G +P + R+ RL ++ + +GG +E+ +
Sbjct: 88 AGREQNDPGWGGADQPGLMALERLRYAARLARA-----SGLPMAATGGLHYGQPPSEAAL 142
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ ++ + LE QS T++NA S+ +++ + ++LV+ A+H+ R++ F+
Sbjct: 143 MAD-AMKRDYGLEIRWLEEQSRTTWENAVLSADLLQPQGVRRVVLVTQAWHMPRARWSFE 201
Query: 194 HFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIA 236
G ++ YL+A Y +P S + + L E IG+L
Sbjct: 202 QAGFEVISAPMGYLSAGYARPLGGWLPESRVIWQSSQLLNEAIGLLAY 249
>gi|312963224|ref|ZP_07777708.1| protein of unknown function DUF218 [Pseudomonas fluorescens WH6]
gi|311282490|gb|EFQ61087.1| protein of unknown function DUF218 [Pseudomonas fluorescens WH6]
Length = 253
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 15/233 (6%)
Query: 14 HLLCQSIRKIFFMSCFMLL--FSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIV 70
+S ++ + L I ++ + L+ + + IV
Sbjct: 25 WWFRRSRPRLAGCCFALGLGGMWLISLPVMVEWGARVLETEPPLAREEWSTLAQRADAIV 84
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG+G +P+ R RL K+ ++ SGG +E
Sbjct: 85 VLGSGRERGDPAW-GADQPTGIGLERQRYAARLAKA-----SGLPVLTSGGLHYGTPPSE 138
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + + + E +S T++NA+ S+ ++ K +++V+ A+H+ R+
Sbjct: 139 AQLMAVSMQDDFGVTVR-WKEERSRTTWENARMSAEILLPEGIKRVVVVTQAWHMSRAVW 197
Query: 191 YFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
F+ G + +L +P + + + + E +G
Sbjct: 198 SFEKAGFTVVPAPVGFLGVDNARPLGGWMPEFKSVWQSGQLINEAVGQTGYRL 250
>gi|294507679|ref|YP_003571737.1| hypothetical protein SRM_01864 [Salinibacter ruber M8]
gi|294344007|emb|CBH24785.1| Conserved hypothetical protein [Salinibacter ruber M8]
Length = 180
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 114 CTIIISGGD---PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
C ++I+ G ++ E+ N L + GV D I LE++S +T++NA ++ ++
Sbjct: 19 CPLVIASGGTQPWKRPDAREAPATNVLLQDWGVPGDAILLESKSANTYENATRTAELLDR 78
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTEL 225
++LV+SA H+ R+ F+ GI + +D ++P + +
Sbjct: 79 RGLNCVLLVTSALHMPRALAVFRSAGIKAVPAPTDVQVGDRNYTVLDVLPDAGALAGSTA 138
Query: 226 ALKEYIGILIAYYRG 240
A++EY+G L+ +RG
Sbjct: 139 AIREYVGYLVYDWRG 153
>gi|291295513|ref|YP_003506911.1| hypothetical protein Mrub_1127 [Meiothermus ruber DSM 1279]
gi|290470472|gb|ADD27891.1| protein of unknown function DUF218 [Meiothermus ruber DSM 1279]
Length = 252
Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 80/213 (37%), Gaps = 7/213 (3%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+L + ++ ++ L + L+ + + ++IV+LG G E
Sbjct: 44 VLLGGGVLCALLVAAVVFTPLTRTLAEGLIVNEAPQKADLIVVLGGGMHCGA------GE 97
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER-DD 147
S +R+ + + L+++ + + + + V ++ + +
Sbjct: 98 LEASSLARLEKGLELWRAGYAPRITLSDTVGEIFGDARCPSLGRVAAQRVQALYGDEGPE 157
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I Q T A + +++ + ++LV++ H +R+ F+ G+ + S
Sbjct: 158 ILFLPQMRTTRTEALAVAELVQARGWQRVLLVTTPAHSRRAAGAFRKLGLEVLSVNSSEP 217
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ + ++EY+G+L+ RG
Sbjct: 218 RFDRALAAPADRLQALTPLVREYLGLLVYRLRG 250
>gi|15672393|ref|NP_266567.1| hypothetical protein L17153 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723285|gb|AAK04509.1|AE006277_9 hypothetical protein L17153 [Lactococcus lactis subsp. lactis
Il1403]
Length = 194
Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 78/221 (35%), Gaps = 30/221 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + F+ L I + IL K + + D I++LG+
Sbjct: 2 KKTFKIIGAFVGLILLIPVICLALILSKS-------TDRTAENSTDIKTILVLGSRINQN 54
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P+ + R+ + L K+ Q II+SG ++E+ N L+
Sbjct: 55 KK-------PAKITQERLDAALLLAKNNPQ----AKIIVSGAKGADEPVSEAFSMKNYLI 103
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ D I E ++ DT +N +S K ++V+S +HL R+ + G+
Sbjct: 104 THHIRADRIISEDKAGDTAENIAYS----KKYFDGKTVIVTSDFHLYRALYLAKQEGVKV 159
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + P E +G++ A+ G
Sbjct: 160 EGFAAKTKVNNLLYYPNYYG--------HEILGLIYAFVFG 192
>gi|330811913|ref|YP_004356375.1| hypothetical protein PSEBR_a4949 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380021|gb|AEA71371.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 253
Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 84/235 (35%), Gaps = 15/235 (6%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW-KKDGNII 69
++W + + + F + ++ K L+ + + I
Sbjct: 24 AWWWRHSRPRLARLCFAVGLGGFWLMSLPVVVQWSAKALEREPPLLRSEWATLAQRADAI 83
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG+G + +P+ R RL ++ +GG +
Sbjct: 84 VVLGSGRERGD-LAWGADQPTGVGLERQRYAARLA-----KVSGLPVLTTGGLHYGTPPS 137
Query: 130 ESIVYNN-KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + + L + GV E +S T++NAQ S+ ++ K +++++ A+H+ RS
Sbjct: 138 EAKLMADSMLDDFGVNVR--WQEGRSRTTWENAQMSAEILLPEGIKRVVVITQAWHMPRS 195
Query: 189 QLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
F+ G + +L +P + + + + E G++
Sbjct: 196 VWSFERAGFEVVPAPVGFLGQDNARPLGGWMPEFKSIWQSGQLMNEAAGLVGYAL 250
>gi|307611505|emb|CBX01179.1| hypothetical protein LPW_28781 [Legionella pneumophila 130b]
Length = 250
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 20/242 (8%)
Query: 3 LSWIFLIVSYWHLLCQ--SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L + L + + L + + +L+ + G +P+ L L+ Y +
Sbjct: 17 LCLLTLGICIFLLYRRLAPTFTKVMLFVVLLVLLAMSTGWLPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G I +PA + + S R+ E +RL++ + + S
Sbjct: 74 RVNPNVKWVVVLGGGQNIGEGMPANDL-LTSASLKRLVEGVRLFRDLPDAKLLLSGGGSA 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + + +ET S++T A+ ++++ LV+
Sbjct: 133 G-----EQSEALLLAELTKWFAIDPEKVVIETVSINTADQARELAAIV---HDHPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKMVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|145220256|ref|YP_001130965.1| hypothetical protein Cvib_1452 [Prosthecochloris vibrioformis DSM
265]
gi|145206420|gb|ABP37463.1| protein of unknown function DUF218 [Chlorobium phaeovibrioides DSM
265]
Length = 246
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 15/223 (6%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ + + + L + L++ L+ +R +S IV+LG T IP
Sbjct: 30 RRWLVWMGIGLLWLMSIPAAGDGLMRVLEGPGRRVAVSS--IAPAEAIVVLGGMTLQIPG 87
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
P+ + R + L+++ + + T +++ E + + +
Sbjct: 88 APSGEW---GDAADRFEAGVDLFRAGRAPLLVFTG--GRLPWRENFEPEGELLRRRAVLL 142
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV D +++ + +T + A+ ++ ++ K IILV+SA+H+ RS F+ G
Sbjct: 143 GVPADGVRVTGIAGNTAEEARAAARLLGPN--KRIILVTSAFHMTRSLRLFRSAGFTVVP 200
Query: 202 SCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
DY + S IP L+ AL+E +GI +
Sbjct: 201 FRVDYRVQPSTRTSILSFIPDPEALLLSFTALREMMGIAWYHV 243
>gi|327402034|ref|YP_004342872.1| hypothetical protein Fluta_0024 [Fluviicola taffensis DSM 16823]
gi|327317542|gb|AEA42034.1| protein of unknown function DUF218 [Fluviicola taffensis DSM 16823]
Length = 255
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 92/248 (37%), Gaps = 18/248 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+W+ + + + +++R + + F I + +
Sbjct: 15 PYTWLLIAIYFALFSKKTVRAKRAKYAAIFIALFFSNTFIYKEFCRQWE----IFGTPIS 70
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K ++ ++L +++ + + RI++T+ LYK+ K + + G
Sbjct: 71 QVKHYDVAIVLTGMAEYN---NDLQVLSARRGIDRIWQTISLYKAGKIDRILISGDH--G 125
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL--V 179
GL E+ L++ G+ I ET+S +T++NA S ++ + + + V
Sbjct: 126 YLIDKGLHEATQLKEILVKWGIPEHVIITETKSKNTYENAVESQKIVNRLFPNSNAILLV 185
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-------IIPLSANFYLTELALKEYIG 232
+S H++R++ F G+ +D IIP + LKE IG
Sbjct: 186 TSGRHMRRARACFNKLGLKCDTYSTDLFTGPNRSFTFDELIIPDVSTMSDWHSLLKEMIG 245
Query: 233 ILIAYYRG 240
+ G
Sbjct: 246 YIAYDMTG 253
>gi|229149917|ref|ZP_04278145.1| hypothetical protein bcere0011_14750 [Bacillus cereus m1550]
gi|228633598|gb|EEK90199.1| hypothetical protein bcere0011_14750 [Bacillus cereus m1550]
Length = 194
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 82/227 (36%), Gaps = 36/227 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + ++ + G+ + D + I++LG+
Sbjct: 3 MRKKKIMKGILVVIIICAVYAGFL-----------QYHIYKHGHMNATYDADYIIVLGSK 51
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+++ RI + + I+SGG + ++E++
Sbjct: 52 VNGTKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMK 99
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ + D I +E +S T +N FS +I K ++V++ +H+ R++
Sbjct: 100 QGLIKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQ 158
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + + IIP + ++EY+ I ++ NR
Sbjct: 159 GLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM-NR 193
>gi|331004989|ref|ZP_08328398.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
gi|330421202|gb|EGG95459.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
Length = 144
Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Y +I+SGG+ + + L++ + D E +S +T++NA F
Sbjct: 3 YGGYLAKRWDLPVIVSGGNVRSFDVVSEADMGVYFLQNELNVDIAWPEGESRNTWENAHF 62
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLS 217
+ M+ ++ LV+ AYH+ RS FQ G+ + L+ + + +P +
Sbjct: 63 TKKMLDKQSIHHVALVTHAYHMPRSVYAFQQAGLTVSPMPTGQLSQQSSTSYWLNWLPSA 122
Query: 218 ANFYLTELALKEYIGILIAYYR 239
+++ LAL EY+G+L +
Sbjct: 123 GALHISRLALHEYLGLLFYSLK 144
>gi|255023117|ref|ZP_05295103.1| hypothetical protein LmonocyFSL_06015 [Listeria monocytogenes FSL
J1-208]
Length = 189
Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 85/218 (38%), Gaps = 33/218 (15%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R + M +++ FI I+ + + ++ + +++LG P
Sbjct: 2 RSLKKMVVILIIIGFIYLLIVAAFMFS---------CSRTKPIENADTVLILGAKVNGDP 52
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+P++ ++ R+ + + + +I+SGG AE+ V L+
Sbjct: 53 AVPSLVLQ------ERLDAAVAYLNEYPKVN----VIVSGGQGADESTAEAEVMEEYLVN 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ R I +ET+S T +N ++S+ + ++V+S YH+ R+ + + GI+
Sbjct: 103 EGIARKRIAMETKSKRTEENIKYSNEKFE---LGKTVIVTSDYHMYRALMLAKRQGIDAS 159
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + ++E + I A+
Sbjct: 160 GLPAKSRTPAKY-----------KGMMREVLSITYAWV 186
>gi|300983094|ref|ZP_07176438.1| hypothetical protein HMPREF9553_02397 [Escherichia coli MS 200-1]
gi|300306998|gb|EFJ61518.1| hypothetical protein HMPREF9553_02397 [Escherichia coli MS 200-1]
Length = 181
Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RL++ +I +GG + +
Sbjct: 2 DYIVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTN 56
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + V GV R+ I DT + A I +LV+SA HL
Sbjct: 57 TVSTAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIG---DAPFLLVTSASHLP 113
Query: 187 RSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ ++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 114 RAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 173
>gi|20808561|ref|NP_623732.1| hypothetical protein TTE2177 [Thermoanaerobacter tengcongensis MB4]
gi|20517188|gb|AAM25336.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 192
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 86/218 (39%), Gaps = 29/218 (13%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
F +L+F+ I + F+ + K + I++LG
Sbjct: 3 RFLKLVVVLIFALFSIIAILAYQIISFGFT--------EKPKKSDAIIVLGCAVYGDA-- 52
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
PS R+ E ++LYK IIISGG ++E+ LE G
Sbjct: 53 ------PSPFFKERLEEALKLYKEGYGRY----IIISGGKGPGESISEAEAGKRYFLEKG 102
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V +I L+ +S T++N FS +++ K I+VS+ +HLKR+ + + GI+
Sbjct: 103 VASKNILLDNKSFSTYENLLFSKEIMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDA--- 159
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ + L+E + +L Y RG
Sbjct: 160 ------SFSGVFVKEYVGDEVYGFLREVLALLYTYLRG 191
>gi|302039339|ref|YP_003799661.1| hypothetical protein NIDE4067 [Candidatus Nitrospira defluvii]
gi|300607403|emb|CBK43736.1| conserved protein of unknown function DUF218 [Candidatus Nitrospira
defluvii]
Length = 270
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 73/206 (35%), Gaps = 19/206 (9%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+ L+ Y P P + +V+L G E S S R L+K
Sbjct: 71 IALLETQY--PSFLPASASKFDAVVVLAGGVFQ-KGSLRPADEVSDASRQRTSCGTDLWK 127
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+ T + GL ES + GV I E QS T++NA +
Sbjct: 128 QNLAPKLLLTG--GDATVFRTGLMESHEMKRWAIRLGVPESAILTEEQSRTTYENAVQTK 185
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----------LNAYYSII 214
SM+ + + LV++AYHL R+ F+ G + + +
Sbjct: 186 SMLGSGRIL---LVTAAYHLPRAVRLFEKQGFVVTPFPCGFESQHTPQQAWEQATLFDFL 242
Query: 215 PLSANFYLTELALKEYIGILIAYYRG 240
P + +T A+ E GI++ + G
Sbjct: 243 PTAKALLITSQAVDEVAGIIVYWLAG 268
>gi|188590697|ref|YP_001920933.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188500978|gb|ACD54114.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
Length = 357
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 27/199 (13%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L+ + + RP L + + I++LG+G P + SRI +
Sbjct: 155 VVNFLMSSIIYQLNRPKL------NQDFIIVLGSGLIGDRVPPLL--------ASRIDKA 200
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+ Y Q + II SGG ++E+ + G+ +D +E S+ T +N
Sbjct: 201 IEFYNKQSQVTNPPKIIFSGGQGPDEKVSEAFAMQKYAVNKGITIEDTIIEDNSVSTLEN 260
Query: 161 AQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+FS ++++N+ + ++ YHL R+ +Y + GI ++ S +A
Sbjct: 261 MKFSKNIMENLMPEGYRSIFTTNNYHLFRAGIYARLAGIKSQGVGS-----------KTA 309
Query: 219 NFYLTELALKEYIGILIAY 237
++L ++EYI I++ Y
Sbjct: 310 LYFLPNAMIREYIAIVVMY 328
>gi|299534801|ref|ZP_07048130.1| hypothetical protein BFZC1_02177 [Lysinibacillus fusiformis ZC1]
gi|298729646|gb|EFI70192.1| hypothetical protein BFZC1_02177 [Lysinibacillus fusiformis ZC1]
Length = 344
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 31/227 (13%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L ++ IF + + FI + L + + + RP L + + I++
Sbjct: 118 PASLFSVHLQPIFGGISLITFYFFIH---LSNFLSAYFLYQFNRPRL------NQDFIIV 168
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG+G P + SRI + + Y + TII SGG L E+
Sbjct: 169 LGSGLINDKVPPLL--------ASRIQKAIDFYHKQAAVTTPPTIIFSGGQGPDENLPEA 220
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRS 188
+E G+ + E +S++T+QN FS ++ + N I ++ +HL R+
Sbjct: 221 EAMQRYAIEKGIPIEQTLQENRSVNTYQNMLFSKQLMDARKQGEAYNSIFTTNNFHLFRA 280
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+Y + G++++ S +A +Y ++EY+ I++
Sbjct: 281 GIYARLAGLDSQGIGS-----------KTAFYYWPNAMIREYVAIVV 316
>gi|296502298|ref|YP_003663998.1| hypothetical protein BMB171_C1462 [Bacillus thuringiensis BMB171]
gi|296323350|gb|ADH06278.1| putative cytoplasmic protein [Bacillus thuringiensis BMB171]
Length = 192
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + + I+SG
Sbjct: 35 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHDKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 83 GKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ + G+ + + IIP + ++EY+ I ++
Sbjct: 142 NDFHMFRAKKIAEKQGLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM- 189
Query: 241 NR 242
NR
Sbjct: 190 NR 191
>gi|307717857|ref|YP_003873389.1| transmembrane protein [Spirochaeta thermophila DSM 6192]
gi|306531582|gb|ADN01116.1| probable transmembrane protein [Spirochaeta thermophila DSM 6192]
Length = 249
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 94/240 (39%), Gaps = 22/240 (9%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
L+V L S R F ++ +LL L+ ++ +
Sbjct: 20 VVFALLVGVVSLRRGSRRGAVAAWVFAGFLYLGNTHLVEHLLLAPLERAFPVWDGGGGVR 79
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ GT P + +R++ +R + ++++GG
Sbjct: 80 YVVVLGGGAQAGTPAGDV-------PGVVTLARLWGGLRYA-----RMLGVPLVLAGGSV 127
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G +E + + + E G +++ +E +S T++NA+ ++ M+ ++LV+SAY
Sbjct: 128 WDEGKSEGEMMADLVRELG--WEEVVVEGESRTTWENARNTARMVGR---GPVLLVTSAY 182
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIAYY 238
H++R+ F+ G+ + D+ + + + + + AL+EY+G++
Sbjct: 183 HMQRAVWCFRAQGVEVIPAPVDFRDERPAHWIFYLGISAEAARDVQAALREYVGMVWYRV 242
>gi|255524874|ref|ZP_05391823.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|255511444|gb|EET87735.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
Length = 327
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 93/240 (38%), Gaps = 31/240 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+L I I + S+++ F +L F ++L+ L
Sbjct: 99 MILGSILTIAGIYFFQDTSVKRTLFSLVLILEFYIA--FTFASLLIYSL------IYTCL 150
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + I++ G G S R+ + + +Y C+QH I++SG
Sbjct: 151 PKRLNCDYIIVHGCGLIGGE-------RVSPLLKGRVDKAVHIYHKCRQH---TKIVVSG 200
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-LV 179
G ++E+ N L+E+G DDI LE QS TF+N + M+ K+ V
Sbjct: 201 GKGDDEKISEAAAMKNYLVETGFPEDDIILEEQSKTTFENLKNVKDMLDVNGVKHRYIFV 260
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI-LIAYY 238
++ YH+ R+ LY + + +A +Y ++EYI I +
Sbjct: 261 TNNYHVFRTSLYAKKLKMKASGVGCG-----------TAAYYWPSAFIREYIAIMFRYKW 309
>gi|332288218|ref|YP_004419070.1| hypothetical protein UMN179_00136 [Gallibacterium anatis UMN179]
gi|330431114|gb|AEC16173.1| hypothetical protein UMN179_00136 [Gallibacterium anatis UMN179]
Length = 251
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 87/232 (37%), Gaps = 24/232 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++ +L FI L+K + + + + G +IV+LG G
Sbjct: 34 RFQRTAKSLLAVSLLFAYFISTPFFSNFLIKTI----ALDKPNVELYRQGQVIVVLGGGL 89
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + R+ + L+ I ISGG E+ V +
Sbjct: 90 RYSDYPESYSTTAALP-LERMRFAVYLH-----QMTDLPIAISGGVDN-----EAKVMGS 138
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN----MQGKNIILVSSAYHLKRSQLYF 192
+L + + L+ +S T QNA + + Q + +ILV++ +H++R+ F
Sbjct: 139 ELQRF-FQIEPTWLDNKSNTTEQNAIYLRKLFNQTEEGKQIQRVILVTNEWHMRRAVAAF 197
Query: 193 QHFGINTKASCSDYL----NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Q G + + + IP +FY + L L+E++GIL G
Sbjct: 198 QRQGFEVFPAPTLSQRASGSGLLKFIPQPVSFYQSGLVLREWLGILRDKLIG 249
>gi|228914293|ref|ZP_04077908.1| hypothetical protein bthur0012_15250 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228926749|ref|ZP_04089817.1| hypothetical protein bthur0010_14650 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229121266|ref|ZP_04250497.1| hypothetical protein bcere0016_15720 [Bacillus cereus 95/8201]
gi|228662111|gb|EEL17720.1| hypothetical protein bcere0016_15720 [Bacillus cereus 95/8201]
gi|228832862|gb|EEM78431.1| hypothetical protein bthur0010_14650 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228845287|gb|EEM90323.1| hypothetical protein bthur0012_15250 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 159
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 2 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 50 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 108
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 109 NDFHMFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM 156
>gi|312892082|ref|ZP_07751582.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
gi|311295454|gb|EFQ72623.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
Length = 260
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 90/248 (36%), Gaps = 23/248 (9%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ WIFL++ + I K L I + K P
Sbjct: 15 PICWIFLLLLTGFFVKNIILKKRLFFAAFALLFIFSNQFILSRFAKMW-----DITQGPP 69
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + ++LG ++ S R +T++L K I++SGG
Sbjct: 70 PEGKYSCAIVLGGFSSADQDGNGY----FNGSADRFIKTLQL----KVTGRVPLILMSGG 121
Query: 122 DPQKHGLAE---SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNII 177
+ Q + + ++ + I +E QS +T +NA F+ + I +
Sbjct: 122 NGQLIKTSNLKEADYVFSQFKAFNIPDSCIMIENQSRNTLENAMFTKRILIDKKVPGPYL 181
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYI 231
LV+SA+H++RS F+ GIN D++ IIP + +KE +
Sbjct: 182 LVTSAFHMRRSAYIFKKIGINVTPYPCDFIAGKSAVSLSDFIIPDPLALAQWNIYIKEVV 241
Query: 232 GILIAYYR 239
G + Y +
Sbjct: 242 GFVAYYLK 249
>gi|207742828|ref|YP_002259220.1| hypothetical protein RSIPO_01011 [Ralstonia solanacearum IPO1609]
gi|206594222|emb|CAQ61149.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 243
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 94/246 (38%), Gaps = 18/246 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + W + + + + +++ LL Q L
Sbjct: 4 LLAGMVAWRMPRRRRPAGWVLGIALIVAWLAATPWCG-RLLASWTHPAQPVRLDALQPHG 62
Query: 66 GNIIVLLGNGTTIIPTIPAIRIE--PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+VLLG + A + E S S R +Y + H+ ++ +GG P
Sbjct: 63 EGAVVLLGGSRKLAAREYAGQGETALSGLSLER-----TVYAARLAHAARLPVLATGGAP 117
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ G+ E+ + + + G + I E +S T +NA FS+ M++ + I LV+ +
Sbjct: 118 EGRGVPEAELMGRLVADLGQDARWI--EARSATTEENAAFSAPMLRAAGIQRIYLVTHYW 175
Query: 184 HLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYIGILI 235
H+ R++ YF+ G+ + + S++P + LT AL+E +G L
Sbjct: 176 HMARARRYFEGQGLIVTPAPCGWGGELEERPAGGILSLLPRTDGLALTRSALREALGQLW 235
Query: 236 AYYRGN 241
R
Sbjct: 236 LSMRQG 241
>gi|228907351|ref|ZP_04071209.1| hypothetical protein bthur0013_15180 [Bacillus thuringiensis IBL
200]
gi|228852212|gb|EEM97008.1| hypothetical protein bthur0013_15180 [Bacillus thuringiensis IBL
200]
Length = 194
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 34/224 (15%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+KI +++ + G + + D + I++LG+
Sbjct: 4 RKKKIMKCILVVIMICAVYMGFL---------QYHIYKHGHMNATYDADYIIVLGSKVNG 54
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+++ RI + + I+SGG + ++E++ L
Sbjct: 55 TKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMKQGL 102
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ + D I +E +S T +N FS +I K ++V++ +H+ R++ G+
Sbjct: 103 IKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQGLQ 161
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ + IIP + ++EY+ I ++ NR
Sbjct: 162 LEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM-NR 193
>gi|254370529|ref|ZP_04986534.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|151568772|gb|EDN34426.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
Length = 158
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
++EP+ +Y RI +T +Y Q IIISGG P L+E+ +Y + L + G+
Sbjct: 8 GKLEPALSAYDRILKTAEVYHQHPQQ-----IIISGGAPFGEKLSEAEIYADVLDKLGIL 62
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I LE S +T+QNA+F ++ N + LV+ H KR+++ F F INT + S
Sbjct: 63 KSKIILEKNSKNTYQNAEFIKKILMNDKNTYC-LVTGGIHYKRAKIIFDKFAINTISIAS 121
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I+P + NFY+T+ + EY+GI+ Y
Sbjct: 122 SKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 155
>gi|218896648|ref|YP_002445059.1| hypothetical protein BCG9842_B3664 [Bacillus cereus G9842]
gi|218542086|gb|ACK94480.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 192
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 34/224 (15%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+KI +++ + G + + D + I++LG+
Sbjct: 2 RKKKIMKCILVVIMICAVYMGFL---------QYHIYKHGHMNATYDADYIIVLGSKVNG 52
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+++ RI + + I+SGG + ++E++ L
Sbjct: 53 TKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMKQGL 100
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ + D I +E +S T +N FS +I K ++V++ +H+ R++ G+
Sbjct: 101 IKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQGLQ 159
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ + IIP + ++EY+ I ++ NR
Sbjct: 160 LEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM-NR 191
>gi|218235669|ref|YP_002366399.1| hypothetical protein BCB4264_A1680 [Bacillus cereus B4264]
gi|218163626|gb|ACK63618.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 192
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 83/227 (36%), Gaps = 36/227 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + M+ + G+ + D + I++LG+
Sbjct: 1 MRKKRIMKGILVVIMICAVYAGFL-----------QYHIYKHGHMNATYDADYIIVLGSK 49
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T +++ RI + + I+SGG + ++E++
Sbjct: 50 VNGTKTSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMK 97
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ + D I +E +S T +N FS +I K ++V++ +H+ R++
Sbjct: 98 QGLIKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQ 156
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + + IIP + ++EY+ I ++ NR
Sbjct: 157 GLQLEGLPA--KTPKPIIIPSN---------IREYLAITQYWFM-NR 191
>gi|313622511|gb|EFR92931.1| conserved hypothetical protein [Listeria innocua FSL J1-023]
Length = 189
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 80/220 (36%), Gaps = 36/220 (16%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+K F + + + I+ + + ++ N +++LG
Sbjct: 3 RFKKFFVILIVIGFIYVL---IVAAFMFSG---------TRAKPDENVNTVLILGAKING 50
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P P++ ++ R+ + + +I+SGG E+ V L
Sbjct: 51 DPASPSLVLQ------ERLDAAVAYLNEYPKT----KVIVSGGQGADETTTEAAVMEEYL 100
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G+ ++ I+ ET+S T +N ++S+ ++V+S YH+ R+ + + GI+
Sbjct: 101 VNEGIAKNRIEKETKSKRTEENIKYSNE---KFDLGKTVIVTSDYHMYRALMLAKRQGID 157
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + ++E + I A+
Sbjct: 158 ATGLPAKSRTPAKY-----------KGMMREVLSITYAWV 186
>gi|228952097|ref|ZP_04114192.1| hypothetical protein bthur0006_15080 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229069269|ref|ZP_04202559.1| hypothetical protein bcere0025_14740 [Bacillus cereus F65185]
gi|229078899|ref|ZP_04211451.1| hypothetical protein bcere0023_15610 [Bacillus cereus Rock4-2]
gi|229178126|ref|ZP_04305497.1| hypothetical protein bcere0005_14880 [Bacillus cereus 172560W]
gi|228605256|gb|EEK62706.1| hypothetical protein bcere0005_14880 [Bacillus cereus 172560W]
gi|228704313|gb|EEL56747.1| hypothetical protein bcere0023_15610 [Bacillus cereus Rock4-2]
gi|228713756|gb|EEL65641.1| hypothetical protein bcere0025_14740 [Bacillus cereus F65185]
gi|228807629|gb|EEM54153.1| hypothetical protein bthur0006_15080 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 194
Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 36/227 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + M+ + G+ + D + I++LG+
Sbjct: 3 MRKKKIMKGILVVIMICAVYAGFL-----------QYHIYKHGHMNATYDADYIIVLGSK 51
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+++ RI + + I+SGG + ++E++
Sbjct: 52 VNGTKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMK 99
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ + D I +E +S T +N FS +I K ++V++ +H+ R++
Sbjct: 100 QGLIKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQ 158
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + + IIP + ++EY+ I ++ NR
Sbjct: 159 GLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM-NR 193
>gi|171059605|ref|YP_001791954.1| hypothetical protein Lcho_2924 [Leptothrix cholodnii SP-6]
gi|170777050|gb|ACB35189.1| protein of unknown function DUF218 [Leptothrix cholodnii SP-6]
Length = 271
Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/245 (18%), Positives = 78/245 (31%), Gaps = 19/245 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQ------RPL 57
+ LI+ LL + R + L + + L + R
Sbjct: 29 LLLIIGPALLLQRRHRAWAATVIGLCCALLWLLSCTVTAHWLQERWLRPPPALGSQQRSQ 88
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
L + IV+LG G R + Q+ R+ + L + +
Sbjct: 89 LHAGPDQVPTAIVVLGAGLHKRAPEYGDRPTLTQQAMVRLRYGVWLARQ---TGLPLAYS 145
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
G Q G +E+ + LE S DT +NA + +M++ + I+
Sbjct: 146 GGRGWAQGDGPSEAETAAQIARDEA-GIAMKWLEHDSRDTRENASGTVAMLRAAGVRRIV 204
Query: 178 LVSSAYHLKRSQLYFQHF---GINTKASCSDYLN----AYYSIIPLSANFYLTELALKEY 230
LV+ A H+ R+ F I + Y +P + F L E
Sbjct: 205 LVTHASHMPRALRAFNEAAGSDIACLPAAVAYTTQDDLEVLDWLPSAQGFQQVHALLHEL 264
Query: 231 IGILI 235
IG+L
Sbjct: 265 IGLLA 269
>gi|323704444|ref|ZP_08116023.1| protein of unknown function DUF218 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536510|gb|EGB26282.1| protein of unknown function DUF218 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 194
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 21/209 (10%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
LL I +LL + + I++LG PS
Sbjct: 3 LLIKITASLITFVVLLNIIAELQVIIFAYNAKPVKSDAIIILGCAVYGK--------NPS 54
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ E +RLYK II+SGG ++E+ LL++G+ + I
Sbjct: 55 PFFKERLNEAIRLYKKGLGKY----IIVSGGKGPGEDVSEAEAGKEYLLKNGIPYNTILK 110
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+ +S T QN + S ++ K I+VS+ +HLKR+ + + GIN +Y
Sbjct: 111 DDKSYSTLQNLENSKKIMDEKSLKTAIIVSNKFHLKRASIIAKEAGINA---------SY 161
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + L+E +L Y+R
Sbjct: 162 SGVFVKRYFYEEVYGFLREAPALLYMYFR 190
>gi|228964701|ref|ZP_04125808.1| hypothetical protein bthur0004_15450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228794951|gb|EEM42450.1| hypothetical protein bthur0004_15450 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 194
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 36/227 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + M+ + G+ + D + I++LG+
Sbjct: 3 MRKKKIMKGILVVIMICAVYAGFL-----------QYHIYKHGHMNATYDADYIIVLGSK 51
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+++ RI + + I+SGG + ++E++
Sbjct: 52 VNGAKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMK 99
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ + D I +E +S T +N FS +I K ++V++ +H+ R++
Sbjct: 100 QGLIKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQ 158
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + + IIP + ++EY+ I ++ NR
Sbjct: 159 GLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM-NR 193
>gi|91787552|ref|YP_548504.1| hypothetical protein Bpro_1670 [Polaromonas sp. JS666]
gi|91696777|gb|ABE43606.1| protein of unknown function DUF218 [Polaromonas sp. JS666]
Length = 255
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/230 (13%), Positives = 78/230 (33%), Gaps = 13/230 (5%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ ++L + L + + + ++ +V+LG G
Sbjct: 32 FRGRRGGLSLALVSVMLLGLLSCHGTSVWLARTILPQFAPLPVAALKTGKVQAVVVLGGG 91
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+P+ + +R+ + L + + SGG ++
Sbjct: 92 ALPQAPEY-GEAQPNAHTAARLRYGVWLARQ-----SGLPLGFSGGMGWAASESQRDSEA 145
Query: 136 NKLLESGVERDDI---KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
++ + E ++ DT NA+ + +++ + I LV+ A+H+ RS F
Sbjct: 146 EVARRMALQDYRLALRWSEAEARDTAGNARLLAPLLRRDGVQRIALVTHAWHMPRSVAAF 205
Query: 193 QHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G+ + Y+ +P + + L+E + + +A +
Sbjct: 206 EAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMASRNVLREGLALALARF 255
>gi|47566094|ref|ZP_00237132.1| uncharacterized conserved membrane protein of SANA family CAC0441
[Bacillus cereus G9241]
gi|47557011|gb|EAL15341.1| uncharacterized conserved membrane protein of SANA family CAC0441
[Bacillus cereus G9241]
Length = 192
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 35 NETYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K ++V+
Sbjct: 83 GKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNM-KKGMIVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 142 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 189
Query: 241 NR 242
NR
Sbjct: 190 NR 191
>gi|206970731|ref|ZP_03231683.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206734367|gb|EDZ51537.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 192
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 36/227 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + M+ + G+ + D + I++LG+
Sbjct: 1 MRKKKIMKGILVVIMICAVYAGFL-----------QYHIYKHGHMNATYDADYIIVLGSK 49
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+++ RI + + I+SGG + ++E++
Sbjct: 50 VNGTKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMK 97
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ + D I +E +S T +N FS +I K ++V++ +H+ R++
Sbjct: 98 QGLIKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQ 156
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + + IIP + ++EY+ I ++ NR
Sbjct: 157 GLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM-NR 191
>gi|224502681|ref|ZP_03670988.1| hypothetical protein LmonFR_09199 [Listeria monocytogenes FSL
R2-561]
gi|254832250|ref|ZP_05236905.1| hypothetical protein Lmon1_12929 [Listeria monocytogenes 10403S]
Length = 312
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 99/240 (41%), Gaps = 25/240 (10%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+++ I ++ W + + + +G+ + F YQ
Sbjct: 69 LIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNF-- 126
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIII 118
+ + + +++LG+G +P + SR+ ++ Y + T I+
Sbjct: 127 --PRYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIV 177
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG ++E+ L+E G++ + I +E QS++T QN +FS + + + L
Sbjct: 178 SGGQGANETISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSL 237
Query: 179 V-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 238 FSTNNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 286
>gi|219872211|ref|YP_002476586.1| hypothetical protein HAPS_2205 [Haemophilus parasuis SH0165]
gi|219692415|gb|ACL33638.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
Length = 201
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 19/210 (9%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
L L LS + K IVLL G + ++ S
Sbjct: 2 LYIFSIPYTSQKLHDSL---VTEDNLSIEDYKSAQAIVLLSGGLRDSKELF-GKLAISEI 57
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+ R+ L Q ++I+ G +E+ V +L E LE
Sbjct: 58 ALERVRYAAFL-----QKETGLPLLIT--GSSPKGTSEAAVMKKEL-EQFFHIPTQWLEE 109
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS-------CSD 205
++ T +NA+FS +++ I+LV++ +H++R+++ F+ G +
Sbjct: 110 KAKTTAENAKFSKPILEKEGINKIVLVTNQWHMQRARMLFEREGFKILPASVGAGKMPET 169
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILI 235
Y + IP S + ALKE+IG
Sbjct: 170 YGLNVFYFIPQSGALHSNMHALKEWIGYWK 199
>gi|251778604|ref|ZP_04821524.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082919|gb|EES48809.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 357
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L+ + + RP L + + I++LG+G P + SRI +
Sbjct: 155 VVNFLMSSIIYQLNRPKL------NQDFIIVLGSGLIGDRVPPLL--------GSRIEKA 200
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
++ Y Q + II SGG ++E+ + G+ +D LE S+ T +N
Sbjct: 201 IKFYNKQSQVTNPPKIIFSGGQGPDEKVSEAFTMQKYAVNKGIPIEDTILEDNSVSTLEN 260
Query: 161 AQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+FS S+++N+ + ++ YHL R+ +Y + GI ++ S +A
Sbjct: 261 MKFSKSIMENLMPEGYRSIFTTNNYHLFRAGIYARIAGIKSQGIGS-----------KTA 309
Query: 219 NFYLTELALKEYIGILIAY 237
++L ++EYI I++ Y
Sbjct: 310 LYFLPNAMIREYIAIVVMY 328
>gi|16801598|ref|NP_471866.1| hypothetical protein lin2536 [Listeria innocua Clip11262]
gi|16415058|emb|CAC97763.1| lin2536 [Listeria innocua Clip11262]
Length = 189
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 36/220 (16%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+K F + + + I+ + + ++ N +++LG
Sbjct: 3 RFKKFFVILIVIGFIYVL---IVAAFMFSG---------TRAKPDENVNTVLILGAKING 50
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P P++ +E R+ + + +I+SGG E+ V L
Sbjct: 51 DPATPSLVLE------ERLDTAVAYLNEYPK----AKVIVSGGQGADESTTEAAVMEEYL 100
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G+ R+ IK ET+S T +N ++S+ ++V+S YH+ R+ + + GIN
Sbjct: 101 VNEGIARNRIKKETKSKRTEENIKYSNE---KFDLGKTVIVTSDYHMYRALMLAKRQGIN 157
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + ++E + I A+
Sbjct: 158 ATGLPAKSRTPAKY-----------KGMMREVLSITYAWV 186
>gi|228920427|ref|ZP_04083772.1| hypothetical protein bthur0011_14410 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228839057|gb|EEM84353.1| hypothetical protein bthur0011_14410 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 194
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 36/227 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + M+ + G+ + D + I++LG+
Sbjct: 3 MRKKKIMKGILGVIMICAVYAGFL-----------QYHIYKHGHMNATYDADYIIVLGSK 51
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+++ RI + + I+SGG + ++E++
Sbjct: 52 VNGTKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMK 99
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ + D I +E +S T +N FS +I K ++V++ +H+ R++
Sbjct: 100 QGLIKQNIVEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQ 158
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + + IIP + ++EY+ I ++ NR
Sbjct: 159 GLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM-NR 193
>gi|228938827|ref|ZP_04101427.1| hypothetical protein bthur0008_14880 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971708|ref|ZP_04132329.1| hypothetical protein bthur0003_14850 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978317|ref|ZP_04138694.1| hypothetical protein bthur0002_15210 [Bacillus thuringiensis Bt407]
gi|228781334|gb|EEM29535.1| hypothetical protein bthur0002_15210 [Bacillus thuringiensis Bt407]
gi|228787798|gb|EEM35756.1| hypothetical protein bthur0003_14850 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228820676|gb|EEM66701.1| hypothetical protein bthur0008_14880 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 194
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 34/224 (15%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+KI +++ + G + + +D I++LG+
Sbjct: 4 RKKKIIKCILVVIMICAVYAGFL---------QYHIYKHGHMNASEDAEYIIVLGSKVNG 54
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+++ RI + + I+SGG + ++E++ L
Sbjct: 55 TKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMKQGL 102
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ + D I +E +S T +N FS +I K ++V++ +H+ R++ G+
Sbjct: 103 IKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQGLQ 161
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ + IIP + ++EY+ I ++ NR
Sbjct: 162 LEGLPA--KTPRPIIIPSN---------VREYLAITQYWFM-NR 193
>gi|229189814|ref|ZP_04316825.1| hypothetical protein bcere0002_14880 [Bacillus cereus ATCC 10876]
gi|228593622|gb|EEK51430.1| hypothetical protein bcere0002_14880 [Bacillus cereus ATCC 10876]
Length = 194
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 82/227 (36%), Gaps = 36/227 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + M+ + G+ + D + I++LG+
Sbjct: 3 MRKKKIMKGILVVIMICAVYAGFL-----------QYHIYKHGHMNATYDADYIIVLGSK 51
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+++ RI + + I+SGG + ++E++
Sbjct: 52 VNGTKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMK 99
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ + D I +E +S T +N FS +I K ++V++ +H+ R++
Sbjct: 100 QGLIKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQ 158
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + + I+P + ++EY+ I ++ NR
Sbjct: 159 GLQLEGLPA--KTPKPIIVPSN---------VREYLAITQYWFM-NR 193
>gi|290893680|ref|ZP_06556661.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556753|gb|EFD90286.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 189
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 80/221 (36%), Gaps = 36/221 (16%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +++I + + + I+ + + + + +++LG
Sbjct: 2 RRLKRISIILIAIGFIYLL---IVAAFMFSG---------TRAKPSDNADTVLILGAKVN 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P EP+ R+ + +++SGG + +E+ V
Sbjct: 50 GDPA------EPAEVLKERLDAAVTYLNENPTMQ----VVVSGGQGEDESASEASVMEEY 99
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ G+ R IK+E +S T +N ++S ++V+S YH+ R+ + + G+
Sbjct: 100 LVNKGITRSRIKIENKSRRTEENIKYSKE---KFNLGKTVIVTSDYHMYRALMLAKRQGL 156
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + S + + ++E + I A+
Sbjct: 157 DASGLPA-----------KSRSVIKIKNMMRETLSITYAWV 186
>gi|326939331|gb|AEA15227.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 192
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 34/224 (15%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+KI +++ + G + + +D I++LG+
Sbjct: 2 RKKKIIKCILVVIMICAVYAGFL---------QYHIYKHGHMNASEDAEYIIVLGSKVNG 52
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+++ RI + + I+SGG + ++E++ L
Sbjct: 53 TKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQGKGEDISEALAMKQGL 100
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ + D I +E +S T +N FS +I K ++V++ +H+ R++ G+
Sbjct: 101 IKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMIVTNDFHMFRAKKIAAKQGLQ 159
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ + IIP + ++EY+ I ++ NR
Sbjct: 160 LEGLPA--KTPRPIIIPSN---------VREYLAITQYWFM-NR 191
>gi|313617350|gb|EFR89766.1| conserved hypothetical protein [Listeria innocua FSL S4-378]
Length = 189
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 36/220 (16%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+K F + + + I+ + + ++ N +++LG
Sbjct: 3 RFKKFFVILIVIGFIYVL---IVAAFMFSG---------TRAKPDENVNTVLILGAKING 50
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P P++ +E R+ + + +I+SGG E+ V L
Sbjct: 51 DPATPSLVLE------ERLDTAVAYLNEYPK----AKVIVSGGQGADESTTEAAVMEEYL 100
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G+ R+ IK ET+S T +N ++S+ ++V+S YH+ R+ + + GIN
Sbjct: 101 VNEGIARNRIKKETKSKRTEENIKYSNE---KFDLGKTVIVTSDYHMYRALMLAKRQGIN 157
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + ++E + I A+
Sbjct: 158 ATGLPAKSRTPAKY-----------KGMMREVLSITYAWV 186
>gi|88861294|ref|ZP_01135925.1| hypothetical protein PTD2_22487 [Pseudoalteromonas tunicata D2]
gi|88816673|gb|EAR26497.1| hypothetical protein PTD2_22487 [Pseudoalteromonas tunicata D2]
Length = 250
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 80/204 (39%), Gaps = 17/204 (8%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
I ++++ + SY + + +V+LG + PA + S +R
Sbjct: 54 STPFISNLIIEKKEASYS--AFNSNKHPVIHYVVVLGCKIMPNKSRPA-NSQLGHCSLAR 110
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
++E +RL K +++SGG + G++ S + + G + I L ++
Sbjct: 111 LYEGLRLAKLYPS----AKLVVSGGGFK--GVSNSEIMRQAAIAIGFDPQRILLNPKA-- 162
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYY 211
A+ + + + + LV+S H++R+ F G++ A+ +D+ +
Sbjct: 163 -RDTAEEALLLAPKLVDNQVALVTSIAHMQRAVELFNQQGVDVIAAPTDWQEMPMNPLWR 221
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
+P E+IG L
Sbjct: 222 QFVPTPEALMALTEHQHEWIGNLW 245
>gi|229109172|ref|ZP_04238771.1| hypothetical protein bcere0018_14430 [Bacillus cereus Rock1-15]
gi|228674182|gb|EEL29427.1| hypothetical protein bcere0018_14430 [Bacillus cereus Rock1-15]
Length = 196
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + + I+SG
Sbjct: 39 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHDKAIAIVSG 86
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 87 GKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 146 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 193
Query: 241 NR 242
NR
Sbjct: 194 NR 195
>gi|330984301|gb|EGH82404.1| hypothetical protein PLA107_04649 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 244
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 8/220 (3%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
L G G++ + + + D +IV+LG G
Sbjct: 18 RWLKILAVGASLALYVGGTGLLNSAIER--WARGGEAQQHTSAFADKQLIVVLGLGVEFQ 75
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN-NKL 138
P + R+ + + +Y+ C Q CT++ISGG + L E+ VY L
Sbjct: 76 DGKP----VVPTYALPRLLKAIEVYRDC-QTVSQCTLLISGGPTGETTLTEAEVYQDRIL 130
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ I+LE +S +T++NA+FSSS K LV+S H++RSQ YF HF
Sbjct: 131 HSAPDLAGHIELEAKSRNTWENARFSSSWAKAHGYGQARLVTSLLHMRRSQSYFAHFDFP 190
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
T S+ + S +P + N + E+ + E IG+
Sbjct: 191 TSPEYSEQVVGPTSWLPSAWNLAMVEVLIHEQIGLWRYEL 230
>gi|229096200|ref|ZP_04227173.1| hypothetical protein bcere0020_14480 [Bacillus cereus Rock3-29]
gi|229102312|ref|ZP_04233021.1| hypothetical protein bcere0019_14730 [Bacillus cereus Rock3-28]
gi|229115155|ref|ZP_04244565.1| hypothetical protein bcere0017_14500 [Bacillus cereus Rock1-3]
gi|228668295|gb|EEL23727.1| hypothetical protein bcere0017_14500 [Bacillus cereus Rock1-3]
gi|228681213|gb|EEL35381.1| hypothetical protein bcere0019_14730 [Bacillus cereus Rock3-28]
gi|228687160|gb|EEL41065.1| hypothetical protein bcere0020_14480 [Bacillus cereus Rock3-29]
Length = 159
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
D + I++LG+ +++ RI + + I+SGG
Sbjct: 4 TDDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKTIAIVSGGQ 51
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ++E++ L++ + D I +E +S T +N FS +I K + +V++
Sbjct: 52 GKGEDISEALAMKQGLMKQNIAEDRIIMEDKSTSTDENITFSKPLIPANMKKGM-IVTND 110
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+H+ R++ G+ + + IIP + ++EY+ I ++ NR
Sbjct: 111 FHMFRAKKIAAKQGLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM-NR 158
>gi|229183906|ref|ZP_04311122.1| hypothetical protein bcere0004_14730 [Bacillus cereus BGSC 6E1]
gi|228599558|gb|EEK57162.1| hypothetical protein bcere0004_14730 [Bacillus cereus BGSC 6E1]
Length = 159
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + + I+SG
Sbjct: 2 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 50 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 108
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY I ++
Sbjct: 109 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYFAITQYWFM- 156
Query: 241 NR 242
NR
Sbjct: 157 NR 158
>gi|301156135|emb|CBW15606.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1]
Length = 247
Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 80/242 (33%), Gaps = 19/242 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ + + L + +L L L+ Q
Sbjct: 18 ILILWGLSLILAKFNFKKLSRISTALGFSLLYLLSIPYTAQVLKDSLITE---DHLTLQD 74
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IVLLG G + A + + R+ L ++ + +I
Sbjct: 75 YQQAQAIVLLGGGLRDSKELYAP-LASTAIQLERLRYAAFL----QKETHLPLLITGA-- 127
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G E+ + +L +E ++L T +NA F+ M++ IILV++
Sbjct: 128 -SPTGAIEAKIAAEELQNF-FNVPTKWIEPKALTTKENALFTKQMLEKEGIHKIILVTNE 185
Query: 183 YHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+H++R++L FQ G + + Y IP LKE+IG
Sbjct: 186 WHMQRAKLLFQQQGFDVLPASVGEGITPDSYGLNMMHFIPQGGAITKNMQLLKEWIGYWK 245
Query: 236 AY 237
Sbjct: 246 ER 247
>gi|229090673|ref|ZP_04221906.1| hypothetical protein bcere0021_14970 [Bacillus cereus Rock3-42]
gi|228692615|gb|EEL46341.1| hypothetical protein bcere0021_14970 [Bacillus cereus Rock3-42]
Length = 172
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 15 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 62
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 63 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 121
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 122 NDFHMFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM- 169
Query: 241 NR 242
NR
Sbjct: 170 NR 171
>gi|300869552|ref|ZP_07114133.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300332420|emb|CBN59331.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 351
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/254 (20%), Positives = 95/254 (37%), Gaps = 21/254 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L IF ++ +S +LL ++ L + + + +
Sbjct: 101 VLLLIFATTGIVSGGVRNPAPKRIIS-ALLLLIVASNPLVALSLAEQAEREAIQLVQIET 159
Query: 62 WKKD-GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ IVL+G GTT +I+ + RI RLY+ +I+S
Sbjct: 160 CCQNKVGAIVLVGQGTTEPKIPYRTQIQL-TDAGDRIAYAARLYRHGLAPY----LIVSA 214
Query: 121 GDPQK--HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNII 177
G + E+ L++ GV +DI LET+S + ++A + ++ N G II
Sbjct: 215 GYRPDLEGHVLEAADVKRLLVKMGVLPEDIILETKSKNLHESAIQTRIILNNKGLGDRII 274
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----------SIIPLSANFYLTELA 226
LV+SA + R+ F + + +D+ P + +T
Sbjct: 275 LVTSAIQMGRATRTFIKEKMRVSPAPTDFYTFELNAKPRRRLMVVDFFPSAQALSITTRI 334
Query: 227 LKEYIGILIAYYRG 240
++E L + RG
Sbjct: 335 IQEDFAYLYYFVRG 348
>gi|229016285|ref|ZP_04173233.1| hypothetical protein bcere0030_8630 [Bacillus cereus AH1273]
gi|229022523|ref|ZP_04179055.1| hypothetical protein bcere0029_8750 [Bacillus cereus AH1272]
gi|228738776|gb|EEL89240.1| hypothetical protein bcere0029_8750 [Bacillus cereus AH1272]
gi|228745056|gb|EEL95110.1| hypothetical protein bcere0030_8630 [Bacillus cereus AH1273]
Length = 332
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 30/237 (12%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ I L++ + +++++ +L F I + +L +Y +
Sbjct: 106 VFGIIGLLMKLAFSVYHPSFYMYYVTVVLLFLYF------AYIFMSYL--TYAVLYHFIK 157
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + I++LG+G +P + SR+ + M Y II+SGG
Sbjct: 158 VKYIPDFIIVLGSGLIGGDRVPPL-------LASRLDKGMDEYIK---SGRIPKIIVSGG 207
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVS 180
++E+ L+E G+ D+ E +S +T QN FS ++ I V+
Sbjct: 208 QGPDELVSEAAAMKKYLVEKGMNEKDVLTEDKSRNTLQNMLFSKKIMDTIKTDHKSIFVT 267
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ YH+ R+ +Y + G+ + S+ +A +YL L+EYIGIL+ Y
Sbjct: 268 NNYHVFRASIYARLSGLKCEGVGSN-----------TARYYLPSAFLREYIGILVMY 313
>gi|229029391|ref|ZP_04185475.1| hypothetical protein bcere0028_14820 [Bacillus cereus AH1271]
gi|228731922|gb|EEL82820.1| hypothetical protein bcere0028_14820 [Bacillus cereus AH1271]
Length = 194
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI E Q I+SG
Sbjct: 37 NATYDADYIIVLGSKVNGTTPSYSLQY--------RIDEAAE----YLQSHEKTIAIVSG 84
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 85 GKGKGEDISEALAMKNGLMKQKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 143
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 144 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 191
Query: 241 NR 242
NR
Sbjct: 192 NR 193
>gi|325578228|ref|ZP_08148363.1| hypothetical protein HMPREF9417_1104 [Haemophilus parainfluenzae
ATCC 33392]
gi|325159964|gb|EGC72093.1| hypothetical protein HMPREF9417_1104 [Haemophilus parainfluenzae
ATCC 33392]
Length = 247
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 80/242 (33%), Gaps = 19/242 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ + S L + +L L L+ Q
Sbjct: 18 ILILWGLSLILAKFNFKKLSRISTSLGFSLLYLLSIPYTAQVLKDSLITE---DHLTLQD 74
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IVLLG G + A + + R+ L ++ + +I
Sbjct: 75 YQQAQAIVLLGGGLRDSKELYAP-LASTGIQLERLRYAAFL----QKETHLPLLITGA-- 127
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G E+ + +L +E ++L T +NA F+ M++ IILV++
Sbjct: 128 -SPTGAIEAKIAAEELQNF-FNVPTKWIEPKALTTKENALFTKQMLEKEGIHKIILVTNE 185
Query: 183 YHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+H++R++L FQ G + + Y IP LKE+IG
Sbjct: 186 WHMQRAKLLFQQQGFDVLPASVGEGITPDSYGLNMMHFIPQGGAITKNMQLLKEWIGYWK 245
Query: 236 AY 237
Sbjct: 246 ER 247
>gi|196039056|ref|ZP_03106363.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196030201|gb|EDX68801.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
Length = 192
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 76/179 (42%), Gaps = 24/179 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 35 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S+ T +N +FS +I + K + +V+
Sbjct: 83 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSMSTDENIKFSKPLIPDNMKKGM-IVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 142 NDFHMFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM 189
>gi|284052580|ref|ZP_06382790.1| hypothetical protein AplaP_14023 [Arthrospira platensis str.
Paraca]
gi|291568842|dbj|BAI91114.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 328
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 82/217 (37%), Gaps = 16/217 (7%)
Query: 37 GWGIIPTILLKHLQF-SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
++ L ++ + Q + IVLLG GTT +I+ +
Sbjct: 109 STPVLAQWLALQVERVAVQTVQTDLCCGERAGAIVLLGRGTTQPKLPYRTQIQL-TATGD 167
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI T LY+ + + I H E+ L+ GV DI L T+S
Sbjct: 168 RIPYTAELYRE--RLARLVIIAAGDRHELIHPTNEAKDIQQLLIYMGVLPRDILLATESH 225
Query: 156 DTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN------ 208
+ A +++ + G+ IILV+SA ++R+ L F G+ + +++
Sbjct: 226 TIREEALEVKDIMEKRRLGRTIILVTSALEMRRAALAFTQVGLKVIPAPTNFSTFIPYGK 285
Query: 209 -----AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ P + L+ + EY+ + RG
Sbjct: 286 RKDRVSFQDFAPNADALVLSTRVVDEYLATFYYFLRG 322
>gi|47526931|ref|YP_018280.1| hypothetical protein GBAA_1645 [Bacillus anthracis str. 'Ames
Ancestor']
gi|65318981|ref|ZP_00391940.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|47502079|gb|AAT30755.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
Length = 172
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 15 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 62
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K ++V+
Sbjct: 63 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNM-KKGMIVT 121
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 122 NDFHMFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM 169
>gi|160941542|ref|ZP_02088874.1| hypothetical protein CLOBOL_06440 [Clostridium bolteae ATCC
BAA-613]
gi|158435507|gb|EDP13274.1| hypothetical protein CLOBOL_06440 [Clostridium bolteae ATCC
BAA-613]
Length = 238
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 74/220 (33%), Gaps = 30/220 (13%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+L ++++ + + LF F+ I +++ + D + I++LG
Sbjct: 5 AILKKAVKILLVLGLAGCLFLFL----INLYMIRK-EKPNIISSDDAAALGDVDCIMVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS R+ + + LY+ ++ GD + E
Sbjct: 60 CSVRPD-------GTPSGMLRDRLDKGIELYEDGVSDR-----LLMSGDHGRKNYDEVNR 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
++ G+ DI ++ T+++ + + + + I+V+ YH+ R+ Q
Sbjct: 108 MKQYAIDEGIPSGDIFMDHAGFSTYESMYRARDIFQVKKI---IIVTQRYHMYRALYVAQ 164
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
G+ SD P L+E +
Sbjct: 165 AMGMEAYGVESD---------PRQYGGQKMRD-LRELLAR 194
>gi|228984797|ref|ZP_04144969.1| hypothetical protein bthur0001_14980 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229155285|ref|ZP_04283396.1| hypothetical protein bcere0010_14780 [Bacillus cereus ATCC 4342]
gi|228628210|gb|EEK84926.1| hypothetical protein bcere0010_14780 [Bacillus cereus ATCC 4342]
gi|228774995|gb|EEM23389.1| hypothetical protein bthur0001_14980 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 194
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + + I+SG
Sbjct: 37 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 84
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K ++V+
Sbjct: 85 GKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNM-KKGMIVT 143
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 144 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 191
Query: 241 NR 242
NR
Sbjct: 192 NR 193
>gi|229043469|ref|ZP_04191179.1| hypothetical protein bcere0027_15170 [Bacillus cereus AH676]
gi|228725847|gb|EEL77094.1| hypothetical protein bcere0027_15170 [Bacillus cereus AH676]
Length = 196
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + + I+SG
Sbjct: 39 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHDKAIAIVSG 86
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K ++V+
Sbjct: 87 GKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNM-KKGMIVT 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 146 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 193
Query: 241 NR 242
NR
Sbjct: 194 NR 195
>gi|261868380|ref|YP_003256302.1| molybdate ABC transporter permease [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413712|gb|ACX83083.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 247
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 81/220 (36%), Gaps = 19/220 (8%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+L+ + IL L L+ + K IVLLG G +
Sbjct: 38 RLCALLGILILYVVSIPYTAQILKDSL---VTEDHLTLEDYKQAQAIVLLGGGVRDSKEL 94
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
A + S R+ L Q ++IS G +E+ V +LL+
Sbjct: 95 YAP-LASSATQLERLRYAAYL-----QKETQLPLLIS--GVSPTGASEAKVSAQELLDF- 145
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
LE +SL T +NA ++ +++ IILV++ +H++R++L F+ G +
Sbjct: 146 FHVPTKWLEEKSLTTKENALYTRQLLEKEGINKIILVTNEWHMQRAKLLFEGQGFQVLPA 205
Query: 203 -------CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
Y IP + LKE++G L
Sbjct: 206 SVGEGITPEAYSLNMMHFIPQAGAIAKNMQLLKEWMGYLK 245
>gi|30019764|ref|NP_831395.1| putative cytoplasmic protein [Bacillus cereus ATCC 14579]
gi|229127043|ref|ZP_04256042.1| hypothetical protein bcere0015_14980 [Bacillus cereus BDRD-Cer4]
gi|29895309|gb|AAP08596.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
gi|228656396|gb|EEL12235.1| hypothetical protein bcere0015_14980 [Bacillus cereus BDRD-Cer4]
Length = 194
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + + I+SG
Sbjct: 37 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHDKAIAIVSG 84
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 85 GKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 143
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 144 NDFHMFRAKKIAAKQGLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM- 191
Query: 241 NR 242
NR
Sbjct: 192 NR 193
>gi|255026242|ref|ZP_05298228.1| hypothetical protein LmonocytFSL_07670 [Listeria monocytogenes FSL
J2-003]
Length = 284
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 99/240 (41%), Gaps = 25/240 (10%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+++ I ++ W + + + +G+ + F YQ
Sbjct: 41 LIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNF-- 98
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIII 118
+ + + +++LG+G +P + SR+ ++ Y + T I+
Sbjct: 99 --PRYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIV 149
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG ++E+ L+E G++ + I +E QS++T QN +FS + + + L
Sbjct: 150 SGGQGANETISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSL 209
Query: 179 V-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 210 FSTNNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 258
>gi|229011030|ref|ZP_04168224.1| hypothetical protein bmyco0001_14820 [Bacillus mycoides DSM 2048]
gi|229166553|ref|ZP_04294306.1| hypothetical protein bcere0007_15250 [Bacillus cereus AH621]
gi|228616957|gb|EEK74029.1| hypothetical protein bcere0007_15250 [Bacillus cereus AH621]
gi|228750202|gb|EEM00034.1| hypothetical protein bmyco0001_14820 [Bacillus mycoides DSM 2048]
Length = 159
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 2 NAIDDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKLHDKTIAIVSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + E++ L++ + D I +E +S T +N +FS +I K ++V+
Sbjct: 50 GQGKGEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPANM-KKGMIVT 108
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 109 NDFHMFRAKKIAAKQGLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM- 156
Query: 241 NR 242
NR
Sbjct: 157 NR 158
>gi|168209230|ref|ZP_02634855.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170712695|gb|EDT24877.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
Length = 206
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 77/221 (34%), Gaps = 30/221 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+KI F++ + + I L + KD ++LG G
Sbjct: 3 KKKILVGLAFLIGLLILVFLIFEVFLTYKMMN-----FKDINQLKDVEYEIILGAGLYGD 57
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
PS R+ E + + + +I+SGG + ES N L+
Sbjct: 58 K--------PSPILQERLEEGL----KYLELHPNTKVIVSGGQGSNEPIPESEAMKNFLV 105
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHFGI 197
G+ + I E +S TFQN +FS +++ +V+S +HL R++ + I
Sbjct: 106 NKGINPNRIIEEDKSKSTFQNLEFSKKILEERHADKDEVLIVTSDFHLFRAKEIADYLNI 165
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ S + + ++E+ ++
Sbjct: 166 KNEGLPSKTPISL-----------RVQYMVREFPAMIKLLL 195
>gi|167039302|ref|YP_001662287.1| hypothetical protein Teth514_0643 [Thermoanaerobacter sp. X514]
gi|256752180|ref|ZP_05493045.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300913942|ref|ZP_07131259.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X561]
gi|307725373|ref|YP_003905124.1| hypothetical protein Thet_2282 [Thermoanaerobacter sp. X513]
gi|166853542|gb|ABY91951.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X514]
gi|256748908|gb|EEU61947.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300890627|gb|EFK85772.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X561]
gi|307582434|gb|ADN55833.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X513]
Length = 192
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ F+ + I ++ L++ L + K ++I++LG
Sbjct: 3 LLLRFIGVLIVIFVTVV-----ITLEYQIISFALY-EKPKKSDVIIVLGCAVYGK----- 51
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
PS R+ E +RLYK II+SGG ++E+ LL++G+
Sbjct: 52 ---TPSPFFKERLDEALRLYKEGYGKY----IIVSGGKGPGENISEAEAGKEYLLKNGIP 104
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I + +SL T++N FS ++ K I++S+ +HLKR+ + + GI+ S S
Sbjct: 105 EKIILTDNKSLSTYENLFFSKEIMDKNSLKTAIIISNKFHLKRASVIAKRIGIDA--SYS 162
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L Y + + F L+E +L Y +
Sbjct: 163 GVLLKRYMLSDEAYGF------LREIPALLYTYLK 191
>gi|229144329|ref|ZP_04272735.1| hypothetical protein bcere0012_14900 [Bacillus cereus BDRD-ST24]
gi|228639116|gb|EEK95540.1| hypothetical protein bcere0012_14900 [Bacillus cereus BDRD-ST24]
Length = 194
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + + I+SG
Sbjct: 37 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 84
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 85 GKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 143
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 144 NDFHMFRAKKIAAKQGLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM- 191
Query: 241 NR 242
NR
Sbjct: 192 NR 193
>gi|227815532|ref|YP_002815541.1| hypothetical protein BAMEG_2945 [Bacillus anthracis str. CDC 684]
gi|229604535|ref|YP_002866117.1| hypothetical protein BAA_1717 [Bacillus anthracis str. A0248]
gi|227002403|gb|ACP12146.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229268943|gb|ACQ50580.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 178
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 21 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 68
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 69 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 127
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 128 NDFHMFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM 175
>gi|121604040|ref|YP_981369.1| hypothetical protein Pnap_1132 [Polaromonas naphthalenivorans CJ2]
gi|120593009|gb|ABM36448.1| protein of unknown function DUF218 [Polaromonas naphthalenivorans
CJ2]
Length = 259
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 6/202 (2%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
L +H + IV+LG G +P+ + SR+
Sbjct: 57 TAVWLARHALPQVAPASSAQLKAGQVQAIVILGGGLLPGAPEYGGAPQPTPDTASRLRYG 116
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+ L + + T +E+ V L+ E+ S DT N
Sbjct: 117 VWLARQ-TGLPVAFTGGTGWAADGMQTASEAEVAAQVALQDYGFTLR-WSESASRDTSGN 174
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS----IIPL 216
A+ + +++ + I LV+ ++H+ R+ F+ G++ + + + +P
Sbjct: 175 ARLLAPLLQRDGVQRIALVTHSWHMPRALAAFERAGLSVTPAPMGFTEPIENHLLQWLPS 234
Query: 217 SANFYLTELALKEYIGILIAYY 238
+ + L L+E +G+ +
Sbjct: 235 AQGLQASRLVLRECLGLAVGRL 256
>gi|228932998|ref|ZP_04095861.1| hypothetical protein bthur0009_14690 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228826599|gb|EEM72370.1| hypothetical protein bthur0009_14690 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 194
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 77/179 (43%), Gaps = 24/179 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + KS K+ I+SG
Sbjct: 37 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAEYLKSHKK----AIAIVSG 84
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E S T +N +FS +I + K + +V+
Sbjct: 85 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDTSTSTDENIKFSKPLIPDNMKKGM-IVT 143
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 144 NDFHMFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM 191
>gi|52143746|ref|YP_083083.1| hypothetical protein BCZK1488 [Bacillus cereus E33L]
gi|51977215|gb|AAU18765.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 192
Score = 86.0 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 35 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 83 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 142 NDFHMFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM- 189
Query: 241 NR 242
NR
Sbjct: 190 NR 191
>gi|228900299|ref|ZP_04064529.1| hypothetical protein bthur0014_15050 [Bacillus thuringiensis IBL
4222]
gi|228859334|gb|EEN03764.1| hypothetical protein bthur0014_15050 [Bacillus thuringiensis IBL
4222]
Length = 172
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 73/184 (39%), Gaps = 25/184 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
D + I++LG+ +++ RI + + I+
Sbjct: 13 HMNATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKTIAIV 60
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG + ++E++ L++ + D I +E +S T +N FS +I K ++
Sbjct: 61 SGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLI-PADMKKGMI 119
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +H+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 120 VTNDFHMFRAKKIAAKQGLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWF 168
Query: 239 RGNR 242
NR
Sbjct: 169 M-NR 171
>gi|295705080|ref|YP_003598155.1| hypothetical protein BMD_2965 [Bacillus megaterium DSM 319]
gi|294802739|gb|ADF39805.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 187
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 85/207 (41%), Gaps = 28/207 (13%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+++FIG ++ ++ Y ++ + +++LG+ P+++
Sbjct: 6 IYTFIGSLVLYIAIISF----YMYQTAHKPVPQNADYVLVLGSKVDGDQMSPSLK----- 56
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
R+ + ++ +Q +I++GG ++E+ L + G++++ I E
Sbjct: 57 ---ERVKTALSYLQAHQQT----KVIVTGGKGSDEEISEAEAAYRFLRKEGIKKNRIIKE 109
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
QS TF+N F+ + K ++LVS+ +HL R+ + + G + + N+
Sbjct: 110 NQSTSTFENFTFTKQKVDIQH-KKVVLVSNDFHLFRASIIAKRQGFDVYPLGAKTPNSI- 167
Query: 212 SIIPLSANFYLTELALKEYIGILIAYY 238
+ +EY IL +
Sbjct: 168 ----------KLQAYFREYAAILKTWL 184
>gi|217959196|ref|YP_002337744.1| hypothetical protein BCAH187_A1788 [Bacillus cereus AH187]
gi|229138411|ref|ZP_04267001.1| hypothetical protein bcere0013_15290 [Bacillus cereus BDRD-ST26]
gi|217065300|gb|ACJ79550.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|228645043|gb|EEL01285.1| hypothetical protein bcere0013_15290 [Bacillus cereus BDRD-ST26]
Length = 159
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + K+ ++ I+SG
Sbjct: 2 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAEYLKAHEK----AIAIVSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 50 GKGKGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 108
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 109 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 156
Query: 241 NR 242
NR
Sbjct: 157 NR 158
>gi|218902828|ref|YP_002450662.1| hypothetical protein BCAH820_1711 [Bacillus cereus AH820]
gi|218538682|gb|ACK91080.1| conserved hypothetical protein [Bacillus cereus AH820]
Length = 192
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 35 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 83 GKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 142 NDFHMFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM 189
>gi|229172359|ref|ZP_04299918.1| hypothetical protein bcere0006_14700 [Bacillus cereus MM3]
gi|228610830|gb|EEK68093.1| hypothetical protein bcere0006_14700 [Bacillus cereus MM3]
Length = 194
Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 76/182 (41%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + Q I+SG
Sbjct: 37 NAAYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLQSHEKTIAIVSG 84
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N L++ + D I +E +S T +N FS +I + K + +V+
Sbjct: 85 GKGKGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENITFSKPLIPDNMKKGM-IVT 143
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 144 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 191
Query: 241 NR 242
NR
Sbjct: 192 NR 193
>gi|16803044|ref|NP_464529.1| hypothetical protein lmo1004 [Listeria monocytogenes EGD-e]
gi|47096336|ref|ZP_00233932.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|224500750|ref|ZP_03669099.1| hypothetical protein LmonF1_14176 [Listeria monocytogenes Finland
1988]
gi|254898822|ref|ZP_05258746.1| hypothetical protein LmonJ_03375 [Listeria monocytogenes J0161]
gi|254911689|ref|ZP_05261701.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254936015|ref|ZP_05267712.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284801336|ref|YP_003413201.1| hypothetical protein LM5578_1086 [Listeria monocytogenes 08-5578]
gi|284994478|ref|YP_003416246.1| hypothetical protein LM5923_1040 [Listeria monocytogenes 08-5923]
gi|16410406|emb|CAC99082.1| lmo1004 [Listeria monocytogenes EGD-e]
gi|47015294|gb|EAL06231.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|258608603|gb|EEW21211.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284056898|gb|ADB67839.1| hypothetical protein LM5578_1086 [Listeria monocytogenes 08-5578]
gi|284059945|gb|ADB70884.1| hypothetical protein LM5923_1040 [Listeria monocytogenes 08-5923]
gi|293589638|gb|EFF97972.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 344
Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 99/240 (41%), Gaps = 25/240 (10%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+++ I ++ W + + + +G+ + F YQ
Sbjct: 101 LIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNF-- 158
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIII 118
+ + + +++LG+G +P + SR+ ++ Y + T I+
Sbjct: 159 --PRYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG ++E+ L+E G++ + I +E QS++T QN +FS + + + L
Sbjct: 210 SGGQGANETISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSL 269
Query: 179 V-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 318
>gi|228945317|ref|ZP_04107672.1| hypothetical protein bthur0007_14800 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228814289|gb|EEM60555.1| hypothetical protein bthur0007_14800 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 159
Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 74/179 (41%), Gaps = 24/179 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ R+ + + I+SG
Sbjct: 2 NATYDADYIIVLGSKVNGTKPSYSLQY--------RMDKAAE----YLKSHEKAIAIVSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K ++V+
Sbjct: 50 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNM-KKGMIVT 108
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R++ + + + +IP + ++EY+ I ++
Sbjct: 109 NDFHMFRAKKIAAKQNLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM 156
>gi|229132528|ref|ZP_04261378.1| hypothetical protein bcere0014_14610 [Bacillus cereus BDRD-ST196]
gi|228650965|gb|EEL06950.1| hypothetical protein bcere0014_14610 [Bacillus cereus BDRD-ST196]
Length = 159
Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 2 NAIDDADYIIVLGSKVNGTQPSYSLQY--------RIDKAAE----YLKLHDKTIAIVSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + E++ L++ + D I +E +S T +N +FS +I K ++V+
Sbjct: 50 GQGKGEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPANM-KKGMIVT 108
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 109 NDFHMFRAKKIAAKQGLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM- 156
Query: 241 NR 242
NR
Sbjct: 157 NR 158
>gi|56476276|ref|YP_157865.1| hypothetical protein ebA1532 [Aromatoleum aromaticum EbN1]
gi|56312319|emb|CAI06964.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 248
Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 68/221 (30%), Gaps = 15/221 (6%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q P IV+LG G
Sbjct: 33 NWKRTGSSLAVVACGGMIAFSLVGFDNFARSPW---PQVPERIALPYPRAEAIVVLGAGR 89
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL-AESIVYN 135
+ + S R+ +LY+ I++SGG P G +E+ +
Sbjct: 90 YLQAPEYDGDTA-AAGSLERVRYAAKLYRE-----TGLPILVSGGRPGDIGTRSEAEIMQ 143
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ L + +E S DT QNA+ S+++++ I LV+ +H+ R+ F
Sbjct: 144 DILEQEFHVPVR-WVEPDSEDTQQNAERSAALLRAEGVTCIYLVTHGFHIDRAAAQFHKH 202
Query: 196 GINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIG 232
G+ + ++ S +P + E +
Sbjct: 203 GLEVVPMATGFVRPQPDTVLSWLPSFEGVARNRGWIYETLA 243
>gi|163939519|ref|YP_001644403.1| hypothetical protein BcerKBAB4_1530 [Bacillus weihenstephanensis
KBAB4]
gi|163861716|gb|ABY42775.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 194
Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 36/227 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + + M+ + G+ D + I++LG+
Sbjct: 3 MRKKKIIKYILVVIMICAVYAGFL-----------QYNIYKHGHMNAIDDADYIIVLGSK 51
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+++ RI + + I+SGG + + E++
Sbjct: 52 VNGTKPSYSLQY--------RIDKAAE----YLKLHDKTIAIVSGGQGKGEDITEALAMK 99
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ + D I +E +S T +N +FS +I K ++V++ +H+ R++
Sbjct: 100 QGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPANM-KKGMIVTNDFHMFRAKKIAAKQ 158
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + + IIP + ++EY+ I ++ NR
Sbjct: 159 GLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM-NR 193
>gi|229017000|ref|ZP_04173920.1| hypothetical protein bcere0030_15650 [Bacillus cereus AH1273]
gi|229023181|ref|ZP_04179692.1| hypothetical protein bcere0029_15230 [Bacillus cereus AH1272]
gi|228738106|gb|EEL88591.1| hypothetical protein bcere0029_15230 [Bacillus cereus AH1272]
gi|228744271|gb|EEL94353.1| hypothetical protein bcere0030_15650 [Bacillus cereus AH1273]
Length = 159
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 74/182 (40%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 2 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHDKTIAIVSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + E++ L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 50 GQGKGEDITEALAMKQGLMKQNIAEDRIIMEDRSTSTDENIKFSKPLIPDKMKKGM-IVT 108
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ + + ++ +IP + ++EY+ I ++
Sbjct: 109 NDFHMFRAKKIAAKQDLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 156
Query: 241 NR 242
NR
Sbjct: 157 NR 158
>gi|269792163|ref|YP_003317067.1| hypothetical protein Taci_0549 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099798|gb|ACZ18785.1| protein of unknown function DUF218 [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 262
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 94/249 (37%), Gaps = 26/249 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L+++ L + + ++ L+ Y+ S
Sbjct: 20 IFVLACLLMALCCLRQPRRWGLLLACLATGIAIYSASCDWSARLITGPLEDMYE----SH 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D +IVLLG G + + + R+ + ++L+ I+ G
Sbjct: 76 PLPTDDGVIVLLGGGVRYDRDLKP--YQLGNYTSVRVLKALQLH-----RDTGWPIVCCG 128
Query: 121 GDP---QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
G+P +E+ + L++ G + E +S T++N + +++ + +N++
Sbjct: 129 GNPRLDPDPEASEANLMAQTLMDMG--ATQVYREGRSRTTWENLVNALPILRRLNRRNVV 186
Query: 178 LVSSAYHLKRSQLYFQHF--GINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEY 230
+V+S++H+ R+ + + G + + L S +PLS T L L+E+
Sbjct: 187 IVTSSFHMPRAIMTARAVLKGFDVYPHQAGRLTDRSPMDPISFLPLS--MSETCLGLREW 244
Query: 231 IGILIAYYR 239
+G+
Sbjct: 245 VGMGAYRVM 253
>gi|293392078|ref|ZP_06636412.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952612|gb|EFE02731.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 247
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 81/220 (36%), Gaps = 19/220 (8%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+L+ + IL L L+ + K IVLLG G +
Sbjct: 38 RLCALLGILILYVVSIPYTAQILKDRL---VTEDHLTLEDYKQAQAIVLLGGGVRDSKEL 94
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
A + S R+ L Q ++IS G +E+ V +LL+
Sbjct: 95 YAP-LASSATQLERLRYAAYL-----QKETQLPLLIS--GVSPTGASEAKVSAQELLDF- 145
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
LE +SL T +NA ++ +++ IILV++ +H++R++L F+ G +
Sbjct: 146 FHVPTKWLEEKSLTTKENALYTRQLLEKEGINKIILVTNEWHMQRAKLLFEGQGFQVLPA 205
Query: 203 -------CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
Y IP + LKE++G L
Sbjct: 206 SVGEGITPEAYSLNMMHFIPQAGAIAKNMQLLKEWMGYLK 245
>gi|228957994|ref|ZP_04119731.1| hypothetical protein bthur0005_15050 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801701|gb|EEM48581.1| hypothetical protein bthur0005_15050 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 194
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ + +++ RI + + I+SG
Sbjct: 37 NATYEADYIIVLGSKVNGMKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 84
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 85 GKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 143
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 144 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 191
Query: 241 NR 242
NR
Sbjct: 192 NR 193
>gi|323342995|ref|ZP_08083226.1| hypothetical protein HMPREF0357_11407 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463059|gb|EFY08254.1| hypothetical protein HMPREF0357_11407 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 346
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 92/237 (38%), Gaps = 30/237 (12%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ ++F+I L+ Q +R + + + F + L + + +P
Sbjct: 114 LIFFVFIIPLLSKLIPQELRWMHTLLTCITFSCFYFIFVFINFLSSSFLYQFFKP----- 168
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KD + I++LG+G +P + +RI + Y +I SGG
Sbjct: 169 -HKDRDFIIVLGSGLRNGTEVPPL-------LAARIDVALEYYHHQTVP---PRLIFSGG 217
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNIIL 178
+ + E + L G+ +ET+S T++N FS ++ +
Sbjct: 218 QGEDECVPEGQAMRDYALNRGIPESHALMETRSTTTYENMLFSKEIMDTYEFDHPYTCLF 277
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ +H+ R+ Y + G++ + +A +++ ++E+I +++
Sbjct: 278 SSNTFHIFRASQYARRVGLDAHGIGA-----------KTAGYFVPNALIREFIALMV 323
>gi|290473867|ref|YP_003466741.1| hypothetical protein XBJ1_0806 [Xenorhabdus bovienii SS-2004]
gi|289173174|emb|CBJ79947.1| putative enzyme [Xenorhabdus bovienii SS-2004]
Length = 268
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 88/239 (36%), Gaps = 17/239 (7%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLSPQWKKDG 66
++ W Q K ++ I LL ++ Y QR +
Sbjct: 26 ALLFLWFTRWQKTGKALLSLSWL-ALLLFSLQPIADKLLLPIEGKYVQRYEPDKAYIAPV 84
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
IV+LG G T P A S R+ E +RLY M T G +
Sbjct: 85 KYIVVLGGGFTYNP-QWAPSANLISNSLPRVTEGIRLYHLNPGTKMIFT-----GGKGVN 138
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + + G+ +D + LDT + A ++ ILV+SA H++
Sbjct: 139 SISSAEIAAMVAQSLGIPVEDTIALREPLDTEEEAAEVEKVLGQQPF---ILVTSANHME 195
Query: 187 RSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
RS +F+ G++ A ++ L A+ IP + F TE A E +G + +
Sbjct: 196 RSLKFFERRGMHPIAGPANQLAVTTPLYAWEKYIPSAYYFSHTERAWYETLGKIWQAIK 254
>gi|268608564|ref|ZP_06142291.1| hypothetical protein RflaF_03567 [Ruminococcus flavefaciens FD-1]
Length = 254
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 92/240 (38%), Gaps = 26/240 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L+ IF+ + L SI + F++L S + G +L L S R + P
Sbjct: 40 VLTVIFVFHGRFTSLVSSIWEKPVGKVFIVLISLLMAG--GIVLASVLSVSMAREMNDPP 97
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+D +V+LG PS R+ ++SGG
Sbjct: 98 QNEDTT-LVVLGC--------KVKDGRPSLMLSRRLNAA----YKYMSGHETVCAVVSGG 144
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVS 180
++E+ L E G++ I +E +S T +N +FS +I LV+
Sbjct: 145 QGSDEVMSEAECMKIYLTEKGIDPQRIFMEDKSTTTKENLEFSKKLIAENGLPQKVTLVT 204
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H R+++ + GI ++ Y+I ++ + + ++E+ GI+ G
Sbjct: 205 DGFHQLRAEMLAEKTGI----------SSPYNISGYTSWYIVPTYWVREWFGIVFYKLFG 254
>gi|229195925|ref|ZP_04322679.1| hypothetical protein bcere0001_14870 [Bacillus cereus m1293]
gi|228587567|gb|EEK45631.1| hypothetical protein bcere0001_14870 [Bacillus cereus m1293]
Length = 159
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + K+ ++ I+SG
Sbjct: 2 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAEYLKAHEK----AIAIVSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N L++ + D I +E +S T +N +FS +I + K ++V+
Sbjct: 50 GKGKGEDISEALAMKNGLMKLKIAEDRIIMEDRSTSTDENIKFSKPLIPDNM-KKGMIVT 108
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 109 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 156
Query: 241 NR 242
NR
Sbjct: 157 NR 158
>gi|326390031|ref|ZP_08211593.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
JW 200]
gi|325993896|gb|EGD52326.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
JW 200]
Length = 192
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 83/215 (38%), Gaps = 26/215 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ F+ + I ++ L++ L + K ++I++LG
Sbjct: 3 LLLRFIGILIVIFVTVV-----ITLEYQIISFALY-EKPKKSDVIIVLGCAVYGK----- 51
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
PS R+ E +RLYK II+SGG ++E+ LL++G+
Sbjct: 52 ---TPSPFFKERLDEALRLYKEGYGKY----IIVSGGKGPGENISEAEAGKEYLLKNGIP 104
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I + +S T++N FS ++ K I++S+ +HLKR+ + + IN S
Sbjct: 105 EKIILTDDKSFSTYENLLFSKEIMDKNSLKTAIIISNKFHLKRASVIAKRIDINASFSGV 164
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
I L+E +L Y +
Sbjct: 165 --------FIKRYMLSDEAYGFLREIPALLYTYLK 191
>gi|49184541|ref|YP_027793.1| hypothetical protein BAS1526 [Bacillus anthracis str. Sterne]
gi|49477297|ref|YP_035830.1| hypothetical protein BT9727_1498 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|165869545|ref|ZP_02214204.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167633396|ref|ZP_02391721.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167639097|ref|ZP_02397370.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686196|ref|ZP_02877418.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706539|ref|ZP_02896999.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177650599|ref|ZP_02933566.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190566262|ref|ZP_03019180.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|254683202|ref|ZP_05147063.1| hypothetical protein BantC_05040 [Bacillus anthracis str.
CNEVA-9066]
gi|254723792|ref|ZP_05185578.1| hypothetical protein BantA1_15178 [Bacillus anthracis str. A1055]
gi|254734554|ref|ZP_05192266.1| hypothetical protein BantWNA_05205 [Bacillus anthracis str. Western
North America USA6153]
gi|254740963|ref|ZP_05198651.1| hypothetical protein BantKB_08062 [Bacillus anthracis str. Kruger
B]
gi|254755205|ref|ZP_05207239.1| hypothetical protein BantV_22267 [Bacillus anthracis str. Vollum]
gi|254759741|ref|ZP_05211765.1| hypothetical protein BantA9_15636 [Bacillus anthracis str.
Australia 94]
gi|270000571|ref|NP_844092.2| hypothetical protein BA_1645 [Bacillus anthracis str. Ames]
gi|49178468|gb|AAT53844.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49328853|gb|AAT59499.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164714985|gb|EDR20503.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512887|gb|EDR88260.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167531434|gb|EDR94112.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170128637|gb|EDS97504.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669893|gb|EDT20634.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172083743|gb|EDT68803.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190562397|gb|EDV16364.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|269850294|gb|AAP25578.2| conserved hypothetical protein [Bacillus anthracis str. Ames]
Length = 192
Score = 85.2 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 35 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 83 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 142 NDFHMFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM 189
>gi|270291245|ref|ZP_06197467.1| hypothetical protein HMPREF9024_01427 [Pediococcus acidilactici
7_4]
gi|270280091|gb|EFA25927.1| hypothetical protein HMPREF9024_01427 [Pediococcus acidilactici
7_4]
Length = 342
Score = 85.2 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 89/242 (36%), Gaps = 30/242 (12%)
Query: 3 LSWIF---LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
LS IF L++ + + +L FIG + + Y
Sbjct: 99 LSLIFRINLLLVLVAGATILLASQYLGRLTGVLLVFIGID-VTFTFIFSCYLFYSFLYQI 157
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
++ N I+ LG G P ++ R+ + + + + I+S
Sbjct: 158 IPIREKVNYIITLGAGIRSETVTPLLKG--------RLDKALEYFWKQ---DGNPKFIVS 206
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKN 175
GG ++E+ L V D I LE QS T QN +FS I+
Sbjct: 207 GGQGPDEPVSEAYAMAKYLKSQHVPEDKIILEDQSTTTLQNMKFSKQKIEKDWKKSGVPK 266
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+I ++ YH+ RS +Y + G+N S ++ ++L ++EYI +L+
Sbjct: 267 VIFATNNYHVLRSAIYARKAGLNANGVGS-----------PTSFYFLPSALIREYIALLV 315
Query: 236 AY 237
Y
Sbjct: 316 IY 317
>gi|196045100|ref|ZP_03112333.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225863573|ref|YP_002748951.1| hypothetical protein BCA_1675 [Bacillus cereus 03BB102]
gi|196024102|gb|EDX62776.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225789948|gb|ACO30165.1| conserved hypothetical protein [Bacillus cereus 03BB102]
Length = 178
Score = 85.2 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + + I+SG
Sbjct: 21 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 68
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 69 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 127
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY I ++
Sbjct: 128 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYFAITQYWFM- 175
Query: 241 NR 242
NR
Sbjct: 176 NR 177
>gi|182414370|ref|YP_001819436.1| hypothetical protein Oter_2554 [Opitutus terrae PB90-1]
gi|177841584|gb|ACB75836.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 264
Score = 85.2 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 80/236 (33%), Gaps = 19/236 (8%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL------SPQWKKDGNII 69
+ + + + + L++ L+ +Y P +
Sbjct: 32 RRRPRLGRWLILGALAFLLLASNRAVSLWLIRPLETTYPAIPEFAPATALPPNLAGCQAV 91
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG G + PT+ A+ + S + R+ E R+ ++ + +I G + +
Sbjct: 92 VVLGGGHSDSPTLSAVN-QLSESAQGRLLEAYRILRALPPEAR----LIVCGRGGPNRPS 146
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ V GV I DT A ++ LV+SA+HL R+
Sbjct: 147 HASVLAQAATSLGVSPHRIVRLDTPRDTEDEAAQLRELLGR--DTPFALVTSAWHLPRAT 204
Query: 190 LYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ G+ +++ + ++ + A++E +G + + R
Sbjct: 205 ALMRGAGLRPVPCPANFAGKPGAPFEWLDLLCGLDGLDRSTKAIRERLGYVWSALR 260
>gi|319440596|ref|ZP_07989752.1| putative secreted protein [Corynebacterium variabile DSM 44702]
Length = 218
Score = 84.8 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 69/220 (31%), Gaps = 27/220 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
IR + +M ++ + + + + + + + + + I++LG
Sbjct: 15 IRGLLYMIVGTIVVALVITLVTAGHVWAYARQ---------DDRSEADTILVLGAA---- 61
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
PS +R+ LY I+ GG E+ L
Sbjct: 62 ----QYNGTPSNWFAARLDHAADLYNDGVA----PRIVTVGGKLDGDVYTEAEAGERYLE 113
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV DI DT ++A+ ++++V+ H R+ + G++
Sbjct: 114 DKGVPASDISTIVHGSDTLESAELFGDEADKEGWGSVVVVTDPAHSLRATDMVRDQGVSA 173
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
AS + A S L E G+L
Sbjct: 174 HASPTRTGPAV------SGRQAQLGSILHETGGLLYYRVT 207
>gi|332662639|ref|YP_004445427.1| hypothetical protein Halhy_0646 [Haliscomenobacter hydrossis DSM
1100]
gi|332331453|gb|AEE48554.1| protein of unknown function DUF218 [Haliscomenobacter hydrossis DSM
1100]
Length = 251
Score = 84.8 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/244 (19%), Positives = 104/244 (42%), Gaps = 14/244 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ W+ L+ + ++ R+ + +L F + + + + S
Sbjct: 15 PMFWVMLLAIAAFISKRAARRRRYALILVLFLIFFSNKGLFEAVCSLWELPPNKITQSYD 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
I +L G + P S +R+ +T+ LY+ K ++ T S
Sbjct: 75 -------IGILLGGYSKTDGYPQDGRHHFNASVNRLTQTLELYQQGKIRNILLTGGSS-- 125
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVS 180
+ G E+ V + + + G+ R + +E+Q+ +T++NA S+ +I+ K + +L++
Sbjct: 126 NIITKGQLEAQVVVDFIEDMGIPRTAVIVESQARNTWENALNSTQIIQAKYPKASCVLIT 185
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIA 236
SA H++R++ F+ G++ + C+DY + + E KE+ G+L+
Sbjct: 186 SATHMRRARACFRKAGLDIEYYCTDYRRTKLGGWAWLKFEPGVIGDWEGLFKEWAGMLVY 245
Query: 237 YYRG 240
+G
Sbjct: 246 AMKG 249
>gi|119487320|ref|ZP_01621071.1| hypothetical protein L8106_21387 [Lyngbya sp. PCC 8106]
gi|119455875|gb|EAW37010.1| hypothetical protein L8106_21387 [Lyngbya sp. PCC 8106]
Length = 328
Score = 84.8 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 77/217 (35%), Gaps = 16/217 (7%)
Query: 37 GWGIIPTILLKHLQFSYQRPLL-SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ L L+ + + + IVLLG+GTT +++ +
Sbjct: 109 SMPFVAQWLAFQLEKTAIETVQTDLCCGERAEAIVLLGSGTTEPKLPYVTQVQLTRIG-D 167
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI +LYK M + + + E+ L+ GV I +T
Sbjct: 168 RIPYAAKLYKDGLAPLMIVS--AGSRNEYLQPVVEADYIARLLVGMGVPSRSILKDTSEG 225
Query: 156 DTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-------- 206
+ +A + K G+ IILV+S ++R+ L F G + +++
Sbjct: 226 TLYDSAVSIQQIAKKQDLGRAIILVTSGLEMRRASLTFASVGFKVIPAPTNFFASLPNEK 285
Query: 207 ---LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +P + LT ++EYI + RG
Sbjct: 286 YQRRVSAKDFLPSAEALLLTTDVVEEYIITFYYFIRG 322
>gi|319945126|ref|ZP_08019388.1| hypothetical protein HMPREF0551_2236 [Lautropia mirabilis ATCC
51599]
gi|319741696|gb|EFV94121.1| hypothetical protein HMPREF0551_2236 [Lautropia mirabilis ATCC
51599]
Length = 335
Score = 84.8 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 66/196 (33%), Gaps = 17/196 (8%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ +++ +G + Y R+ + ++ +
Sbjct: 146 PTTGTASAKPPRVRGVIVPSSG---AAAPNGPQARLDQGGYMRLRAGIETWRRTGGLLVL 202
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
++ + + + GV + I+ S TFQ+ ++ +I+ G
Sbjct: 203 MGG-----LGEQPEYSLAADMRRLAIGLGVPPEAIRTVRSSWTTFQDISGAARLIREEGG 257
Query: 174 KNI-----ILVSSAYHLKRSQLYFQHFGINTKASCSDYL----NAYYSIIPLSANFYLTE 224
++ ILV+SA H++RS G++ SDY + + P + +
Sbjct: 258 QDDSRQAVILVTSALHMQRSLAVAHQAGLDPIPVRSDYRQLASPTWAAWFPNNGAPWNAR 317
Query: 225 LALKEYIGILIAYYRG 240
L E IG+ RG
Sbjct: 318 AMLHELIGVWYYRLRG 333
>gi|295093712|emb|CBK82803.1| Uncharacterized conserved protein [Coprococcus sp. ART55/1]
Length = 282
Score = 84.8 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 96/245 (39%), Gaps = 29/245 (11%)
Query: 1 MLLSWIFLIVSYWHLLC----QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
+L + +F +++ + + +S+RK++ + SF+ + + L + +
Sbjct: 62 LLGTGVFALLTLYGVFRAKIDKSVRKLWNKKAGKICLSFVLALVTAALALVVVITYHMVY 121
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ K+D +V+LG PS R+ +
Sbjct: 122 AAHVKPKQDAT-VVVLGCAVRGGG--------PSLMLRERLIAAQDYLDETPEAVC---- 168
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKN 175
++SGG ++E+ L E G+ + I +E +S T +N +FS+ +I+
Sbjct: 169 VVSGGQGADESMSEAQCMYEYLTEHGIAPERIYMEDKSTSTRENIKFSAEIIRQNGLPDK 228
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +V++ +H R++ GI T + + + ++P ++E GIL
Sbjct: 229 MNIVTNEFHEYRAKRIADKQGIETGSIA---GSTAWWLLP--------TYYVREMAGILY 277
Query: 236 AYYRG 240
+ G
Sbjct: 278 EWISG 282
>gi|229160681|ref|ZP_04288673.1| hypothetical protein bcere0009_14710 [Bacillus cereus R309803]
gi|228622696|gb|EEK79530.1| hypothetical protein bcere0009_14710 [Bacillus cereus R309803]
Length = 159
Score = 84.8 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+D + I++LG+ +++ RI + + I+SGG
Sbjct: 4 TEDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKLHEKTIAIVSGGQ 51
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ++E++ N L++ + D I +E +S T +N +FS +I + K + +V++
Sbjct: 52 GKGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVTND 110
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+H+ R++ G+ + + ++EY+ I ++ NR
Sbjct: 111 FHMFRAKKIAAKQGLQLEGLPAKTPKPII-----------ISSNVREYLAITQYWFM-NR 158
>gi|302342876|ref|YP_003807405.1| hypothetical protein Deba_1443 [Desulfarculus baarsii DSM 2075]
gi|301639489|gb|ADK84811.1| protein of unknown function DUF218 [Desulfarculus baarsii DSM 2075]
Length = 270
Score = 84.8 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 17/205 (8%)
Query: 41 IPTILLKHLQFSY-QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
LL L+ IV+LG A S S R+ E
Sbjct: 61 TGRALLAPLERQAGPYAQPMALMAAGAMDIVVLGGAQQAGELSAA--DRLSAASLRRVAE 118
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+RL++ + + S G + + G I ++ S DT
Sbjct: 119 GVRLWRGVPGARLIFSGEASDGRS-----SVAADMAEMATRLGAPSASIVVDEASRDTAD 173
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSI 213
++ + +++ + LV+SA H+ R+ F+ G+ + +D+ AY
Sbjct: 174 Q---AAILARDLGARPFALVTSAAHMPRALTMFRAQGLRPLPAPADFRCATGDDPAYRRF 230
Query: 214 IPLSANFYLTELALKEYIGILIAYY 238
+P + +++ A+ EY+G++ A+
Sbjct: 231 MPQAQGLLMSQDAIYEYLGLMWAWL 255
>gi|46907236|ref|YP_013625.1| hypothetical protein LMOf2365_1025 [Listeria monocytogenes serotype
4b str. F2365]
gi|47094138|ref|ZP_00231859.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
gi|226223622|ref|YP_002757729.1| hypothetical protein Lm4b_01024 [Listeria monocytogenes Clip81459]
gi|254823724|ref|ZP_05228725.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254827949|ref|ZP_05232636.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254994315|ref|ZP_05276505.1| hypothetical protein LmonocytoFSL_16035 [Listeria monocytogenes FSL
J2-064]
gi|255521903|ref|ZP_05389140.1| hypothetical protein LmonocFSL_11877 [Listeria monocytogenes FSL
J1-175]
gi|46880503|gb|AAT03802.1| putative membrane protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017485|gb|EAL08297.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
gi|225876084|emb|CAS04790.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258600331|gb|EEW13656.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|293592945|gb|EFG00706.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
Length = 344
Score = 84.8 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 99/240 (41%), Gaps = 25/240 (10%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+++ I ++ W + + + +G+ + F YQ
Sbjct: 101 LIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNF-- 158
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIII 118
+ + + +++LG+G +P + SR+ ++ Y + T I+
Sbjct: 159 --PRYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG ++E+ L+E G++ + I +E QS++T QN +FS + + + L
Sbjct: 210 SGGQGANETISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSL 269
Query: 179 V-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 318
>gi|319936939|ref|ZP_08011349.1| exported protein [Coprobacillus sp. 29_1]
gi|319807875|gb|EFW04454.1| exported protein [Coprobacillus sp. 29_1]
Length = 219
Score = 84.8 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 26/180 (14%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+D + I++LG G P + R+ ++LYK K
Sbjct: 34 KKQVNASLEDADCILVLGAGVRNNKPTPMLN--------DRLEVAIQLYKDGKASK---- 81
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II GD + E + +E+GV I ++ T+++ + + K +
Sbjct: 82 -IIMSGDHGQEDYNEVGIMKTFAIENGVPSSAIFMDHAGFSTYESLYRAKEIFKAKKV-- 138
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I+V+ YHL R+ GI ++ P S + T L+E +
Sbjct: 139 -IIVTQDYHLYRALYIGNQLGIEAVGVPAN---------PRSYS-GQTMRDLREVAARVK 187
>gi|254381969|ref|ZP_04997332.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340877|gb|EDX21843.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 338
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 101/234 (43%), Gaps = 29/234 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIF--FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
IF +++ + + ++ + C +LL ++ + + + Y +
Sbjct: 106 IFALIALVVTVPERGSRLVDSLVVCLVLLAGYVSFLFVCFLA-------YACLYGRITVR 158
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGD 122
+ + +V+LG+G T +P + SR+ + R++ + +++ SGG
Sbjct: 159 GNVDYVVVLGSGLTGGEDVPPL-------LASRLEKGHRIHTAQLARGGPAPLLLASGGQ 211
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSS 181
+ E+ + L+ GV R+ ++LE +S T +N +FS ++ + G ++V++
Sbjct: 212 GPGEAVPEARAMADWLIARGVAREHVRLEDRSRTTEENLRFSRELMAEENPGYRCVVVTN 271
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++H R+ + + G+N + S +A ++ ++E++ +
Sbjct: 272 SFHAFRAAMTARRAGVNGQVLGS-----------PTAAYFWPSATIREFVAVFW 314
>gi|187778517|ref|ZP_02994990.1| hypothetical protein CLOSPO_02112 [Clostridium sporogenes ATCC
15579]
gi|187772142|gb|EDU35944.1| hypothetical protein CLOSPO_02112 [Clostridium sporogenes ATCC
15579]
Length = 181
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 22 SQPQKSDCIIILGCKVKGNDPTPFLQW--------RLDEGLRLYNEGYGKY----IIVSG 69
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ L+E GV+++ I LE +S +T +N +FS +++ K+ I+VS
Sbjct: 70 AKGPGENISEAEAMEKYLVEKGVDKNFIILEDKSKNTLENIKFSKKKMEDNNLKSSIIVS 129
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHLKR++L Q GI S ++ + S + +E +L+ Y +
Sbjct: 130 NKYHLKRAELLCQKEGIKASYSGV-FVKPHMS--------HEIVGFFREIPALLVYYVK 179
>gi|225377113|ref|ZP_03754334.1| hypothetical protein ROSEINA2194_02758 [Roseburia inulinivorans DSM
16841]
gi|225211018|gb|EEG93372.1| hypothetical protein ROSEINA2194_02758 [Roseburia inulinivorans DSM
16841]
Length = 249
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 98/241 (40%), Gaps = 39/241 (16%)
Query: 1 MLLSWIFLI-VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+L L+ + W + Q +R IF + C + F+ + +I +++ +
Sbjct: 43 ILFVLAGLLHMGMWDRIPQIVRWIFGILCGIF---FLSFLVIEGMVIHQ---------MH 90
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
Q +K+ + +++LG ++ R+ E + + I++
Sbjct: 91 AQGEKNLDYVIVLGAQVHADKPSVVLKY--------RLDEAILYLNENPETVC----IVA 138
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG + +E+ L+++G+++D I LE QS T +N ++S + G + ++
Sbjct: 139 GGQGKNEPYSEAYGMAQYLMQNGIDKDRILLEDQSKTTEENLRYSRKFLPE--GAKVGII 196
Query: 180 SSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ +H+ R+ + G+ + +D S FYL L+EY +
Sbjct: 197 TNDFHMFRALQIAKKQGLSDVCGIAAD-----------STKFYLPNNMLREYFAEIKFLI 245
Query: 239 R 239
R
Sbjct: 246 R 246
>gi|269468165|gb|EEZ79864.1| hypothetical protein Sup05_0189 [uncultured SUP05 cluster
bacterium]
Length = 194
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
L+K L+ ++Q+ + I +LG+G P P + + S S R E + ++
Sbjct: 2 LIKQLENTHQKYDYFNN---NIEYIHVLGSGHYDNPKWP-LSSQISSTSLKRTMEGISIF 57
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
K K + + +I +G + ++ + + + + +++ + DT + A F+
Sbjct: 58 K--KINKPNLKLIFTGFPGFGNQISNAEINAKIARIANISDNNLIINGNPKDTHEEAIFA 115
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY---YSIIPLSANFY 221
S+I K ILV+S H+ R+ F + G+N A+ +++ + + P +
Sbjct: 116 KSIIG---DKPFILVTSVSHMTRAIELFTNMGMNPIAAPTEFKKSKKIEWLSAPSIGSIK 172
Query: 222 LTELALKEYIGILIAYYRGNR 242
++ + E++G + A+ + N+
Sbjct: 173 KSKNIIHEFLGRIWAFIQLNK 193
>gi|294499692|ref|YP_003563392.1| hypothetical protein BMQ_2936 [Bacillus megaterium QM B1551]
gi|294349629|gb|ADE69958.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 187
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 85/207 (41%), Gaps = 28/207 (13%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+++FIG ++ +++ + + + +++LG+ P+++
Sbjct: 6 IYTFIGSLVLYIVIISFCMYQ----TAHKSVPHNADYVLVLGSKVDGDQMSPSLK----- 56
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
R+ + ++ +Q +I++GG ++E+ L + G++++ I E
Sbjct: 57 ---ERVKTALSYLQAHQQT----KVIVTGGKGSDEEISEAEAAYRFLRKEGIKKNRIIKE 109
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
QS TF+N F+ + K ++LVS+ +HL R+ + + G + + N+
Sbjct: 110 DQSTSTFENFTFTKQKVDIQH-KKVVLVSNDFHLFRASIIAKRQGFDVYPLGAKTPNSI- 167
Query: 212 SIIPLSANFYLTELALKEYIGILIAYY 238
+ +EY IL +
Sbjct: 168 ----------KLQAYFREYAAILKTWL 184
>gi|218288615|ref|ZP_03492892.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
gi|218241272|gb|EED08447.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
Length = 199
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 83/214 (38%), Gaps = 26/214 (12%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNIIVLLGNGTTIIPTIPAIR 86
L + G+ L L +R + ++ V+LG T
Sbjct: 2 AWLWMCLLACGVAALGSLAFLLRFAERLKHEGRSHRPQKSDVGVVLGAYTDG-------- 53
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
EPS +R+ + LY+ II+SGG + ++E+ L+ +G+ D
Sbjct: 54 YEPSHPLVARLRAAIALYRQG----YIRAIIVSGGQGENETVSEARSMKRFLVMNGIPAD 109
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ E S +T++N SS+++++ + ++++S YHL R+ + G++ +
Sbjct: 110 AVHEERMSTNTWENLYHSSAIMRDRGYRTAVIITSDYHLPRALAVARMLGMDATGCGA-- 167
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ A++E + RG
Sbjct: 168 ----------ASTKGEFRAAVREVFAHIEYMLRG 191
>gi|254931387|ref|ZP_05264746.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293582938|gb|EFF94970.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|328475355|gb|EGF46128.1| hypothetical protein LM220_00285 [Listeria monocytogenes 220]
gi|332311412|gb|EGJ24507.1| Integral membrane protein [Listeria monocytogenes str. Scott A]
Length = 344
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 99/240 (41%), Gaps = 25/240 (10%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+++ I ++ W + + + +G+ + F YQ
Sbjct: 101 LIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNF-- 158
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIII 118
+ + + +++LG+G +P + SR+ ++ Y + T I+
Sbjct: 159 --PRYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG ++E+ LLE G++ + I +E QS++T QN +FS + + + L
Sbjct: 210 SGGQGANETISEAEAMRGYLLEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSL 269
Query: 179 V-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 318
>gi|325676983|ref|ZP_08156654.1| hypothetical protein HMPREF0724_14437 [Rhodococcus equi ATCC 33707]
gi|325552145|gb|EGD21836.1| hypothetical protein HMPREF0724_14437 [Rhodococcus equi ATCC 33707]
Length = 231
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 74/229 (32%), Gaps = 30/229 (13%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
S+ L + +I + + + G + + + + IV
Sbjct: 21 SFGAALARWTTRIVLGALLIGVVLVGGT---ALRVWQ---------VARVTDTTPADAIV 68
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG PS +R+ + +LY+ TI+ GG + E
Sbjct: 69 VLGAA--------QYDGTPSSVFEARLDQAHKLYEQGVA----ATIVTVGGKQEGDEYTE 116
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ N L++ GV I + DT + + S + + +LVS +H R++
Sbjct: 117 AASGRNYLMDQGVPGGAIVAVEEGSDTLLSVEAVSREMGARGLHSAVLVSDPWHSLRTRT 176
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ G++ + + A + ++E +L
Sbjct: 177 MARDAGLDAWTAPTRQGPAVMTRESQLHG------IVRETGALLWYQLT 219
>gi|222095337|ref|YP_002529397.1| hypothetical protein BCQ_1677 [Bacillus cereus Q1]
gi|221239395|gb|ACM12105.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 172
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + I++LG+ +++ RI + K+ ++ I+
Sbjct: 13 HMNATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAEYLKAHEK----AIAIV 60
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG + ++E++ N L++ + D I +E +S T +N +FS +I + K + +
Sbjct: 61 SGGKGKGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-I 119
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 120 VTNDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 168
Query: 239 RGNR 242
NR
Sbjct: 169 M-NR 171
>gi|229058345|ref|ZP_04196730.1| hypothetical protein bcere0026_14580 [Bacillus cereus AH603]
gi|228720019|gb|EEL71608.1| hypothetical protein bcere0026_14580 [Bacillus cereus AH603]
Length = 159
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 72/182 (39%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 2 NAIDDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKLHDKTIAIVSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + E++ L++ + D I +E +S T +N +F +I K + +V+
Sbjct: 50 GQGKGEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFLKPLIPANMKKGM-IVT 108
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 109 NDFHMFRAKKIAAKQGLQLEGLPA--KTPKPIIIPSN---------VREYLAITQYWFM- 156
Query: 241 NR 242
NR
Sbjct: 157 NR 158
>gi|118477152|ref|YP_894303.1| hypothetical protein BALH_1456 [Bacillus thuringiensis str. Al
Hakam]
gi|118416377|gb|ABK84796.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 192
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + + I+SG
Sbjct: 35 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 83 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY I ++
Sbjct: 142 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYFAITQYWFM- 189
Query: 241 NR 242
NR
Sbjct: 190 NR 191
>gi|324325732|gb|ADY20992.1| hypothetical protein YBT020_08730 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 192
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+ +++ RI + + I+SG
Sbjct: 35 NATYEADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N L++ +E D I +E +S T +N +FS +I + K + +V+
Sbjct: 83 GKGKGEDISEALAMKNGLMKLKIEEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +H+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 142 NDFHMFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM- 189
Query: 241 NR 242
NR
Sbjct: 190 NR 191
>gi|304384982|ref|ZP_07367328.1| conserved hypothetical protein [Pediococcus acidilactici DSM 20284]
gi|304329176|gb|EFL96396.1| conserved hypothetical protein [Pediococcus acidilactici DSM 20284]
Length = 338
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 89/242 (36%), Gaps = 30/242 (12%)
Query: 3 LSWIF---LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
LS IF L++ + + +L FIG + + Y
Sbjct: 99 LSLIFGVNLLLVLGAGATILLASQYLGRLTGVLLVFIGID-VTFTFIFSCYLFYSFLYQI 157
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
++ + I+ LG G P ++ R+ + + + + I+S
Sbjct: 158 IPIREKVDYIITLGAGIRSETVTPLLKG--------RLDKALEYFWKQ---DGNPKFIVS 206
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKN 175
GG ++E+ L V D I LE QS T QN +FS I+
Sbjct: 207 GGQGPDEPVSEAYAMAKYLKSQHVPEDKIILEDQSTTTLQNMKFSKQKIEKDWKKSGVPK 266
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+I ++ YH+ RS +Y + G+N S ++ ++L ++EYI +L+
Sbjct: 267 VIFATNNYHVLRSAIYARKAGLNANGVGS-----------PTSFYFLPSALIREYIALLV 315
Query: 236 AY 237
Y
Sbjct: 316 IY 317
>gi|42780808|ref|NP_978055.1| hypothetical protein BCE_1734 [Bacillus cereus ATCC 10987]
gi|42736728|gb|AAS40663.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 192
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 91/227 (40%), Gaps = 36/227 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + + M+ ++G+ + + I++LG+
Sbjct: 1 MRKKKIMKYMIGMIMVCAVYVGFL-----------QYNIYKHGQMNATYEADYIIVLGSK 49
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+++ RI + K+ ++ I+SGG + ++E++
Sbjct: 50 VNGTKPSYSLQY--------RIDKAAEYLKAHEK----AIAIVSGGKGKGEDISEALAMK 97
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N+L++ + D I +E +S T +N +FS +I + K ++V++ +H+ R++
Sbjct: 98 NELIKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNM-KKGLIVTNDFHMFRAKKIAAKQ 156
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + ++ +IP + ++EY+ I ++ NR
Sbjct: 157 GLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWFM-NR 191
>gi|327184380|gb|AEA32827.1| hypothetical protein LAB52_09625 [Lactobacillus amylovorus GRL
1118]
Length = 319
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 85/228 (37%), Gaps = 25/228 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+++ + + F ++ F+ I+ I + + L K N
Sbjct: 87 IVIILLIFAYPAFGRFNSAPWFRFIYLFLSMSILYLIFIMMMYTLTAWLNLINFNIKKLN 146
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G P + SRI + +Y +I+SGG
Sbjct: 147 YIVVLGAGLIGKKVTPLL--------ASRIDRGIEIYHKNP----GSKLIMSGGQGSDEE 194
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ ES E GV + DI +E +S T QN +FS +++ +V+++YH+ R
Sbjct: 195 IPESHAMAAYAEEHGVPQSDIIIEDRSKKTNQNLKFSHQLMQP--DSTFCIVTNSYHVYR 252
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + + G+ + + ++ ++E+I L+
Sbjct: 253 ALVLAKRQGLKCIGYGA-----------KTKWYFTLNAFIREFIAYLV 289
>gi|325677631|ref|ZP_08157283.1| hypothetical protein CUS_6193 [Ruminococcus albus 8]
gi|324110599|gb|EGC04763.1| hypothetical protein CUS_6193 [Ruminococcus albus 8]
Length = 252
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 90/241 (37%), Gaps = 28/241 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L++ S+ L+ + K+ + F+ G I +L ++
Sbjct: 38 LLIAVTAKFGSFCRLISKLWGKVPTRVLVITAAVFLAAGFIYAGILS-----FKMYRAQE 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D +IV+LG PS R+ + + ++SG
Sbjct: 93 NVPDDTELIVVLGCQVKG--------TRPSRMLRRRLDVALEAMEKHPDAVC----VVSG 140
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILV 179
G ++E+ ++ L+ G + I +E +S TF+N +F+ M + G++I +V
Sbjct: 141 GQGYGEKISEAKAMHDYLISKGADESRILMEDKSTSTFENIKFTFEMTDKLGYGRDITIV 200
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H R+ L + G + S + YL ++E++G+ +
Sbjct: 201 TDGFHQYRASLIAKQEGAGRITAYSAHTEPR----------YLLTFWVREWLGLTYFWIF 250
Query: 240 G 240
G
Sbjct: 251 G 251
>gi|326204163|ref|ZP_08194023.1| protein of unknown function DUF218 [Clostridium papyrosolvens DSM
2782]
gi|325985674|gb|EGD46510.1| protein of unknown function DUF218 [Clostridium papyrosolvens DSM
2782]
Length = 256
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 86/238 (36%), Gaps = 44/238 (18%)
Query: 10 VSYWHLLCQ---------SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ W L + RK+ + + L + + II +++
Sbjct: 45 IILWALFKKTPSYRRRPNLYRKLIKVFTGLFLIWLVSFAIITAVIITSA---------MS 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + +++LG G P+ R+ T+ YKS II+SG
Sbjct: 96 DKEQKVDSVIVLGAGLKGE--------TPTLVLKKRLDYTLDYYKSNP----DVKIIVSG 143
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN---MQGKNII 177
G + E+ L++ + + I E S T++N +S +N ++
Sbjct: 144 GQGIGETITEAEAMKRYLVKHDIPENIILKEESSTSTYENMLYSKKAYENTIGKPLDKVM 203
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++++ +H+ R+++ + G+ S + I P + L+EY +
Sbjct: 204 IITNDFHMFRAKILAKRAGLKAYGISSG---TPWYIYP--------NVCLREYFALFK 250
>gi|315281729|ref|ZP_07870291.1| integral membrane protein [Listeria marthii FSL S4-120]
gi|313614619|gb|EFR88201.1| integral membrane protein [Listeria marthii FSL S4-120]
Length = 356
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ I + W + + + + +G+ + F YQ
Sbjct: 114 IIGLGILAFIITWFVSILKTGSPILGIAVVFIVALVGYFSFLFLSFLLSTFLYQFNF--- 170
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIIS 119
+ + + +++LG+G +P + SR+ ++ Y + T I+S
Sbjct: 171 -PRYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIVS 222
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG ++E+ LL G++ + I +E +S++T QN +FS + + + L
Sbjct: 223 GGQGANETISEAEAMRGYLLNQGIDENFIIMEDKSVNTLQNMKFSKAKMDAIMPSYNSLF 282
Query: 180 -SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 283 STNNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 330
>gi|254852499|ref|ZP_05241847.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300764214|ref|ZP_07074209.1| hypothetical protein LMHG_10188 [Listeria monocytogenes FSL N1-017]
gi|258605808|gb|EEW18416.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300515204|gb|EFK42256.1| hypothetical protein LMHG_10188 [Listeria monocytogenes FSL N1-017]
Length = 344
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 99/240 (41%), Gaps = 25/240 (10%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+++ I ++ W + + + +G+ + F YQ
Sbjct: 101 LIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNF-- 158
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIII 118
+ + + +++LG+G +P + SR+ ++ Y + T I+
Sbjct: 159 --PRYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG ++E+ L+E G++ + I +E QS++T QN +FS + + + L
Sbjct: 210 SGGQGANETISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAILSNYNSL 269
Query: 179 V-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 318
>gi|217963458|ref|YP_002349136.1| hypothetical protein LMHCC_0160 [Listeria monocytogenes HCC23]
gi|217332728|gb|ACK38522.1| conserved hypothetical protein [Listeria monocytogenes HCC23]
gi|307571968|emb|CAR85147.1| conserved domain protein [Listeria monocytogenes L99]
Length = 189
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 80/221 (36%), Gaps = 36/221 (16%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +++I + + + I+ I+ + + + +++LG
Sbjct: 2 RRLKRISIILIAIGFIYLL---IVAAIMFSG---------TRAKPSDNADTVLILGAKVN 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P EP+ R+ + +++SGG + +E+ V
Sbjct: 50 GDPA------EPAEVLKERLDAAVTYLNENPTMQ----VVVSGGQGEDESASEASVMEEY 99
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ G+ R IK+E +S T +N ++S ++V+S YH+ R+ + + +
Sbjct: 100 LVNKGITRSRIKIEDKSRRTEENIKYSKE---KFNLGKTVIVTSDYHMYRALMLAKRQEL 156
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + S + + ++E + I A+
Sbjct: 157 DASGLPA-----------KSQSVIKIKNMMRETLSITYAWV 186
>gi|220929859|ref|YP_002506768.1| hypothetical protein Ccel_2459 [Clostridium cellulolyticum H10]
gi|220000187|gb|ACL76788.1| protein of unknown function DUF218 [Clostridium cellulolyticum H10]
Length = 256
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 93/241 (38%), Gaps = 35/241 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L +F + K+ + + L + + II I P
Sbjct: 45 IILWALFKKTGLYRKKQNLFGKLIKVFTGLFLVWLVSFIIITAI---------IITSAIP 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + +++LG G P+ R+ T+ YK II+SG
Sbjct: 96 DKEQQVDSVIVLGAGLKGE--------TPTLVLKKRLDYTLEYYKLNP----DVRIIVSG 143
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---II 177
G + + E+ L++ + + I E +S T++N Q+S ++ +N GK ++
Sbjct: 144 GQGKGETITEAEAMKRYLVKHNIHENIILKEERSTSTYENMQYSKNLYENTMGKPLGKVM 203
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++++ +H+ R+++ + G+ S + + P + L+EY + +
Sbjct: 204 IITNDFHMFRAKILAKRAGLKPYGISSG---TPWYLYP--------NVCLREYFALFKSL 252
Query: 238 Y 238
Sbjct: 253 L 253
>gi|312140270|ref|YP_004007606.1| membrane protein [Rhodococcus equi 103S]
gi|311889609|emb|CBH48926.1| putative membrane protein [Rhodococcus equi 103S]
Length = 231
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 75/229 (32%), Gaps = 30/229 (13%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
S+ L + +I + + + G + + + + IV
Sbjct: 21 SFGAALARWTTRIVLGALLIGVVLVGGT---ALRVWQ---------VARVTDTTPADAIV 68
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG PS +R+ + +LY+ TI+ GG + E
Sbjct: 69 VLGAA--------QYDGTPSSVFEARLDQAHKLYEQGVA----ATIVTVGGKQEGDEYTE 116
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ N L++ GV I + DT + + S + ++ +LVS +H R++
Sbjct: 117 AASGRNYLMDQGVPGGAIVAVEEGSDTLLSVEAVSREMGARGLRSAVLVSDPWHSLRTRT 176
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ G++ + + A + ++E +L
Sbjct: 177 MARDAGLDAWTAPTRQGPAVMTRESQLHG------IVRETGALLWYQLT 219
>gi|300117365|ref|ZP_07055155.1| hypothetical protein BCSJ1_00510 [Bacillus cereus SJ1]
gi|298725200|gb|EFI65852.1| hypothetical protein BCSJ1_00510 [Bacillus cereus SJ1]
Length = 192
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 35 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 83 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 142 NDFHMFRAKKIAAKQGLQLEGLSA--ATPKRIVIPSN---------IREYLAITQYWFM 189
>gi|229084714|ref|ZP_04216979.1| hypothetical protein bcere0022_13480 [Bacillus cereus Rock3-44]
gi|228698598|gb|EEL51318.1| hypothetical protein bcere0022_13480 [Bacillus cereus Rock3-44]
Length = 172
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 71/184 (38%), Gaps = 25/184 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ D + ++LLG +++ RI + + +I+
Sbjct: 13 HMKAPDDADYMILLGAKVKGTEPSYSLQY--------RIDKAAE----YLKTHEQTIVIV 60
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG + ++E++ L++ + I +E +S +T +N +FS ++I K ++
Sbjct: 61 SGGKGKGEDISEALAMKQGLMKQNIAEQRIIMEDRSTNTDENIEFSKALI-PADKKKGMI 119
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +H+ R++ + G+ + + ++EY I +
Sbjct: 120 VTNDFHMFRAKKIAKKQGLKVDGLSAKTPKPII-----------VQSNVREYFAITQYWL 168
Query: 239 RGNR 242
NR
Sbjct: 169 M-NR 171
>gi|307267183|ref|ZP_07548690.1| protein of unknown function DUF218 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306917799|gb|EFN48066.1| protein of unknown function DUF218 [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 191
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 29/218 (13%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K+ ++LL FI GII L++ + + K ++I++LG
Sbjct: 2 KMILKIVWLLLVLFIIIGII-------LEWQIISFAYN-EKPKKSDVIIVLGCAVYGDI- 52
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS +R+ E +RLY II+SGG ++E+ LL+
Sbjct: 53 -------PSPFFKARLEEALRLYNEGYGRY----IIVSGGKGPGENISEAEAGKGYLLKK 101
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ I ++ +S T++N QFS ++ K +++S+ +HLKR+ + + GI
Sbjct: 102 GIPEKAILIDDKSFSTYENLQFSKEIMDKKSLKRAVIISNKFHLKRASVIAKRVGIEASF 161
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S L+E + + Y +
Sbjct: 162 SGVFVRRYIN---------EEIYGFLREVVALWYIYLK 190
>gi|226309357|ref|YP_002769317.1| hypothetical protein RER_58700 [Rhodococcus erythropolis PR4]
gi|226188474|dbj|BAH36578.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 336
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 98/228 (42%), Gaps = 27/228 (11%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++ LL Q + F L+ S++G+ +L Y +++ +
Sbjct: 107 VLLASALLTQRYWLAVVLGSFSLVASYLGFLFTSFLL-------YSYVYGRQKYQPGMDA 159
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+ G G + P + SR+ + ++++ + +++SGG +
Sbjct: 160 IVVHGAGLSGADVTPLL--------ASRLDKAADIFRAEVREGRSPLLVVSGGKGSDEVV 211
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSSAYHLKR 187
+E+ L++ G+ R+++ LE +S T +N +++ +++ ++LV+S +H+ R
Sbjct: 212 SEAEAMCVYLVDHGIPRENVMLEDRSTTTLENLEYTRDLLRADTTKPRMVLVTSNFHILR 271
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + + ++ + S +A +YL L+E+ + +
Sbjct: 272 TATFARSLDLDAEVIGS-----------HTARYYLPSAILREFAAVTV 308
>gi|196033543|ref|ZP_03100955.1| conserved hypothetical protein [Bacillus cereus W]
gi|195993977|gb|EDX57933.1| conserved hypothetical protein [Bacillus cereus W]
Length = 192
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 74/179 (41%), Gaps = 24/179 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ R+ + + I+SG
Sbjct: 35 NATYDADYIIVLGSKVNGTKPSYSLQY--------RMDKAAE----YLKSHEKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 83 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R++ + + + +IP + ++EY+ I ++
Sbjct: 142 NDFHMFRAKKIAAKQNLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWFM 189
>gi|126651406|ref|ZP_01723610.1| hypothetical protein BB14905_06979 [Bacillus sp. B14905]
gi|126591659|gb|EAZ85755.1| hypothetical protein BB14905_06979 [Bacillus sp. B14905]
Length = 297
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 101/237 (42%), Gaps = 28/237 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L F+I+ W++ I+ + + ++F+ +G + L +Y
Sbjct: 59 ILGLSFVIMMIWYVFVIFIQIENVLWHILFFYAFLIFGYT--MFLYTSVLAYAVLYHFTP 116
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + N I+ LG+G P + SR+ E ++ K++ II+SGG
Sbjct: 117 IRYEPNYIIALGSGLIGDRVPPLL--------ASRLNEAVK---QYKKYGERPFIIVSGG 165
Query: 122 DPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNII 177
++E+ LL+ + + I +E QS +T +N F+ +++ + I
Sbjct: 166 QGTDEKVSEARAMKTYLLDVHDIPANKILMEDQSTNTEENMIFTKNIMDQHAQGEKYRSI 225
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
V++ +H+ R+ LY + ++ + S +A +Y+ +E+IG+L
Sbjct: 226 FVTNNFHVFRASLYAKKAKLDAEGVGS-----------KTAFYYVPNAFTREFIGLL 271
>gi|258511943|ref|YP_003185377.1| hypothetical protein Aaci_1976 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478669|gb|ACV58988.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 199
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 81/214 (37%), Gaps = 26/214 (12%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNIIVLLGNGTTIIPTIPAIR 86
L + G+ L L R + ++ V+LG T
Sbjct: 2 AWLWMCLLACGVAALGSLAFLLRFAVRLKHEGRSHRPQKSDVGVVLGAYTDG-------- 53
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
EPS +R+ + LY+ II+SGG + ++E+ L+ +G+ D
Sbjct: 54 YEPSHPLVARLRAAIALYRQG----YIRAIIVSGGQGENETVSEARSMKRFLVMNGIPSD 109
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ E S +T++N SS+++++ + ++++S YHL R+ + G+ +
Sbjct: 110 AVHEERMSTNTWENLYHSSAIMRDRGYRTAVIITSDYHLPRALAVARMMGMEATGCGA-- 167
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ A++E + RG
Sbjct: 168 ----------ASTKGEFRAAVREVFAHIEYMLRG 191
>gi|119896762|ref|YP_931975.1| hypothetical protein azo0471 [Azoarcus sp. BH72]
gi|119669175|emb|CAL93088.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 283
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 82/222 (36%), Gaps = 21/222 (9%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+ + + +L L+ ++ + + IV+LG G
Sbjct: 71 WSGIAAGLLLSTPASVSRMLVPLE---PTAVVDMEAARGAQAIVILGGGRRSHAAEYGG- 126
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ + R+ RL ++ +++SGG P + E+ + L E
Sbjct: 127 DTVNRLTLERLRYGARLARA-----TGLPLLVSGGAPSGD-VPEATLMAAALREDFGIAP 180
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS-- 204
E S DT NA+ S++M++ ++LV+ A H++R++ F G+ + +
Sbjct: 181 R-WEEGGSFDTRDNARLSAAMLRADGVTRVVLVTHAAHMRRAEAEFALHGLAVVPAPTAW 239
Query: 205 --------DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
D + + +P Y AL E++G+L
Sbjct: 240 LGPGPERADDDDEVWPSLPSQGTAYAGWYALHEWMGLLAYRL 281
>gi|332142015|ref|YP_004427753.1| hypothetical protein MADE_1013105 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552037|gb|AEA98755.1| hypothetical protein MADE_1013105 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 229
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 15/235 (6%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFI-GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ L+ ++ + ++C L++ I +LL L+ S + L + ++ + I
Sbjct: 3 AMAQLIIKNKKLASKLACASLIWILIWSQPYAVDLLLYPLERSQKVKRLQYKNQRTPDYI 62
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGL 128
+L +P I P S R+ +T+ LY+ K II++GG + +
Sbjct: 63 FVLACYYNTEGDLPNISRWPDC-SLQRLVQTVMLYEQTKS-----KIIVTGGRFLENQDI 116
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ S + L+ GV D I + DT S ++ N + +V+SA H+ R
Sbjct: 117 SYSQKAKSFLISLGVPEDKIITTDKGTDTHGEISSISQLVTNRKLL---VVTSATHVLRV 173
Query: 189 QLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + DY + Y +P + T A+ EY+ ++ +
Sbjct: 174 SNELDNVTASVAFFAVDYHSGGELTPYLRMPSLSALVATRAAIYEYLALVKQLFT 228
>gi|304316432|ref|YP_003851577.1| hypothetical protein Tthe_0963 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777934|gb|ADL68493.1| protein of unknown function DUF218 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 191
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 24/208 (11%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
L I ++ ++ LQ + + I++LG PS
Sbjct: 3 LLIKITAFVVLLNIIAELQ---VITFAYNAKPVNSDAIIVLGCAVYGK--------NPSP 51
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
R+ E ++LYK II+SGG ++E+ LL++G+ + + ++
Sbjct: 52 FFKERLSEAIKLYKEGLGKY----IIVSGGKGPGEDISEAEAGKEYLLKNGITDNVVLMD 107
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
S T QN + S ++ K I+VS+ +HLKR+ + + GIN +Y
Sbjct: 108 DGSYSTLQNLENSKKIMDEKSLKTAIIVSNKFHLKRASIIAKEAGINA---------SYS 158
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYR 239
+ + L+E +L Y R
Sbjct: 159 GVFVKRYFYEEVYGFLREAPALLYMYLR 186
>gi|326561174|gb|EGE11539.1| hypothetical protein E9G_04999 [Moraxella catarrhalis 7169]
gi|326567938|gb|EGE18035.1| hypothetical protein E9Q_04434 [Moraxella catarrhalis BC1]
Length = 252
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 84/220 (38%), Gaps = 20/220 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S++ I +L+ I L L Y L+ D IV+LG G T
Sbjct: 21 KSLKFIAVGGAVILIGVASALTPIFANLGVSLLNLYSALTLATVQ-DDATSIVVLGGGLT 79
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A I + + SR + L+K +II SG AES +
Sbjct: 80 KN---SAGTISLNHFTQSRANAAIHLHKLYP-----LSIITSG--------AESPWLRDY 123
Query: 138 LLESGVERDD-IKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYFQHF 195
L+E I E S++T +NA F++ ++ + + LV+ YH+ R++ F
Sbjct: 124 LIEHIGRTKVVIINENASMNTCENAVFTAKLLSHHELSTTVYLVTDRYHMARARRQFAKA 183
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
GI+T + + L S N T + E + +
Sbjct: 184 GIHTIPAPAP-LAIRSSWQNPKDNLIHTRRTIYELVALAR 222
>gi|68535690|ref|YP_250395.1| putative secreted protein [Corynebacterium jeikeium K411]
gi|68263289|emb|CAI36777.1| putative secreted protein [Corynebacterium jeikeium K411]
Length = 213
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 76/221 (34%), Gaps = 28/221 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++++ +F + L + +G+ + ++ + I +LG
Sbjct: 13 KRAVKYVFITLLTIFLVAAGVFGVTAFQVWHFA---------RSDDRRPADTIFVLGAA- 62
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P+ SR+ LY+ TI+ GG + E+ N
Sbjct: 63 -------QYAGNPTNWFASRLNHAAELYEQGVA----PTIVTVGGKAEGDLYTEAAAGKN 111
Query: 137 KLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L+E + + + DT ++A+ + + + + ++V+ H R+ +
Sbjct: 112 YLVENFDIPESAVVPVEEGADTLKSAEAFAQVADDNGWRTSVVVTDPAHSLRATRMVRDQ 171
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
G+ AS + + ++ + L E +G+L
Sbjct: 172 GLEAWASPTRQGPSVFTRKSQA------NSILHETLGMLYY 206
>gi|89893171|ref|YP_516658.1| hypothetical protein DSY0425 [Desulfitobacterium hafniense Y51]
gi|89332619|dbj|BAE82214.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 257
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 94/240 (39%), Gaps = 42/240 (17%)
Query: 6 IFLIVSYWH------LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+FL+ W L Q + + + ++ + II ++L + +
Sbjct: 44 LFLLWGLWGDKSRNTLFSQRFPGLRKLIRWGIVLLLGSFFIIEGLILWNTEDRIP----- 98
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ G ++++LG G + S+ R+ + + + Q +++S
Sbjct: 99 ----EQGKVLIILGAGLNGE--------QLSWTLRERVDKGVGILAENPQM----KVVVS 142
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-- 177
GG + E+ L+ G+ + I E +S T +N +FS ++ ++G +
Sbjct: 143 GGQGPGEWIPEAEAMAQYLIGQGIAPERILKEDRSTSTMENFRFSRVLLDQLEGFDPAEP 202
Query: 178 --LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++S +H+ RS++ + G+N + + I P + L+EY ++
Sbjct: 203 VLVITSDFHMFRSKILAERNGLNPVGVPC---STPWYIRPNAY--------LREYFAVVK 251
>gi|116872406|ref|YP_849187.1| hypothetical protein lwe0988 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741284|emb|CAK20406.1| putative membrane protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 344
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 97/234 (41%), Gaps = 24/234 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I +++ W + + + +G+ + F YQ + +
Sbjct: 107 ILVLIIMWFGSILKTGSPILGLAIVFVVALVGYFSFLFLSFLLSTFLYQFNF----PRYN 162
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDPQ 124
+ +++LG+G +P + SR+ ++ + K + T I+SGG
Sbjct: 163 QDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFHEKQYLKKGKRATFIVSGGQGA 215
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAY 183
++E+ L+E G++ + I +E +S++T QN +FS + + L ++ +
Sbjct: 216 NETISEAEAMRAYLIEKGIDENFIIMEDKSVNTLQNMKFSKEKMDAIMPTYNSLFATNNF 275
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 276 HLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 318
>gi|168181584|ref|ZP_02616248.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237796355|ref|YP_002863907.1| hypothetical protein CLJ_B3154 [Clostridium botulinum Ba4 str. 657]
gi|182675224|gb|EDT87185.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229261607|gb|ACQ52640.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 197
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 38 SQPQKSDSIIILGCKVKGNNPTPFLK--------RRLDEGLRLYNEGYGKY----IIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ L++ GV++ I LE +S +T +N +FS +++ + I+VS
Sbjct: 86 AKGPGENISEAEAMQKYLVQKGVDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVS 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHLKR++L Q GI +Y + S + L+E +L+ Y +
Sbjct: 146 NKYHLKRAELLCQKEGIKA---------SYSGVFVRSHMSHEIMGFLREIPALLVYYIK 195
>gi|315150439|gb|EFT94455.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
Length = 344
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKSVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|325000419|ref|ZP_08121531.1| hypothetical protein PseP1_16707 [Pseudonocardia sp. P1]
Length = 334
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 82/212 (38%), Gaps = 22/212 (10%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ + + + + + L +Y + + +V+LG G P +
Sbjct: 121 VLGAVTIALLLLTVYVAFLFCSFL--TYAVVYGRLAARPGVDFVVVLGAGLIRGKVTPLL 178
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R SR+ + L + ++ SGG LAE+ LLE GV
Sbjct: 179 R--------SRLDRAIALRRREMGMGNDPVLVTSGGRGPDEPLAEAEAMAGYLLEQGVPE 230
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCS 204
D + E +S T +N FS ++ + ++V++ +H+ R+ L + G++ + S
Sbjct: 231 DAVLREDRSRTTLENLTFSDRLMAGRVPRYRCVVVTNNFHVFRTALLARQAGVDAQVLGS 290
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+A +Y ++E++ IL A
Sbjct: 291 -----------PTARYYWPSATIREFVAILAA 311
>gi|148380856|ref|YP_001255397.1| hypothetical protein CBO2900 [Clostridium botulinum A str. ATCC
3502]
gi|153931082|ref|YP_001385163.1| hypothetical protein CLB_2864 [Clostridium botulinum A str. ATCC
19397]
gi|153935289|ref|YP_001388632.1| hypothetical protein CLC_2797 [Clostridium botulinum A str. Hall]
gi|148290340|emb|CAL84464.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152927126|gb|ABS32626.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152931203|gb|ABS36702.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 197
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 38 SQPQKSDSIIILGCKVKGNDPTPFLK--------RRLDEGLRLYNDGYGKY----IIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ L++ G+++ I E +S +T +N +FS +++ + I+VS
Sbjct: 86 AKGPGENISEAEAMQKYLVQKGLDKKFIIPEDKSRNTLENIKFSKKKMEDNNLSSSIIVS 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHLKR++L Q GI +Y + S + L+E +L+ Y +
Sbjct: 146 NKYHLKRAELLCQKEGIKA---------SYSGVFVRSHMSHEIMGFLREIPALLVYYIK 195
>gi|331268940|ref|YP_004395432.1| hypothetical protein CbC4_0755 [Clostridium botulinum BKT015925]
gi|329125490|gb|AEB75435.1| conserved protein [Clostridium botulinum BKT015925]
Length = 262
Score = 82.1 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/244 (17%), Positives = 95/244 (38%), Gaps = 37/244 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF-------MSCFMLLFSFIGWGIIPTILLKHLQFSY 53
+ I+L + + ++ Q ++ + ++ FI G+ IL++ L
Sbjct: 37 IGFHMIWLFLGVFVIVFQRFKERILKFYKKINIKFRTVIIFFIVIGLSSFILIEGL---- 92
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ + +++LG S R+ T+ K +
Sbjct: 93 IIHSAISKTTDEKKYMIVLGAAVHGD--------YMSLILKKRMDTTLEYLKKYP----N 140
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM---IKN 170
II+SGG + E+ L+++G+ D I E +S +T +N ++S + +
Sbjct: 141 TKIIVSGGKGPGELITEAEAMKRYLIQNGINHDQIIKEEKSRNTAENFKYSLEILKQREK 200
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
++ +V++ +H+ R++ + GIN A S + + N+Y ++EY
Sbjct: 201 KDNPSVCVVTTDFHMFRAKFLAKRAGINVHAVPSK------GYLSSAPNYY-----IREY 249
Query: 231 IGIL 234
++
Sbjct: 250 FAVI 253
>gi|228996828|ref|ZP_04156462.1| hypothetical protein bmyco0003_14130 [Bacillus mycoides Rock3-17]
gi|229004505|ref|ZP_04162244.1| hypothetical protein bmyco0002_14590 [Bacillus mycoides Rock1-4]
gi|228756696|gb|EEM06002.1| hypothetical protein bmyco0002_14590 [Bacillus mycoides Rock1-4]
gi|228762889|gb|EEM11802.1| hypothetical protein bmyco0003_14130 [Bacillus mycoides Rock3-17]
Length = 193
Score = 82.1 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 83/228 (36%), Gaps = 36/228 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++ + + + M++ +IG+ + D + ++LLG
Sbjct: 1 MIKKKKMMKYSLVVIMIIVGYIGFL-----------QYNIYKHGHMEAPNDADYMILLGA 49
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+++ RI + + +I+SGG + ++E+
Sbjct: 50 KVKGTEPSYSLQY--------RIDKAAE----YLKTHEQTIVIVSGGKGKGEDISEARAM 97
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L++ + I +E +S +T +N +FS S+I K ++V++ +H+ R++ +
Sbjct: 98 KKGLMKQSIAEQRIIMEDRSTNTDENIEFSKSLI-PANKKKGMIVTNDFHMFRAKKIAEK 156
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + + + ++EY I + NR
Sbjct: 157 QGLKVNGLPAKTPKSII-----------IQSNVREYFAITQYWLT-NR 192
>gi|319947862|ref|ZP_08022049.1| hypothetical protein ES5_00997 [Dietzia cinnamea P4]
gi|319438468|gb|EFV93401.1| hypothetical protein ES5_00997 [Dietzia cinnamea P4]
Length = 205
Score = 82.1 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 72/218 (33%), Gaps = 27/218 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R + ++ LL + G I + + + + IV+LG
Sbjct: 3 RAVSWVLTIALLLCLVIPGFIAFRVWH---------VARIDDRTPADAIVVLGAA----- 48
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P+ +R+ L+ II GG E+ L
Sbjct: 49 ---QYNGVPTPVFQARLEHAALLHDEGVAPQ----IITVGGGQPGDLYTEAGSGRAYLTR 101
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV + + +T + + +++ G++++LVS H RS++ + G++
Sbjct: 102 LGVPPEAVLAVETGTNTEGSLDAVAQTVRDQGGQSVVLVSDPTHSYRSRMMARDAGLDAW 161
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S + + A ++ ++E +L Y
Sbjct: 162 TSPTRHGPAVWTRE------NQIMSIIRETGAVLWYQY 193
>gi|313624306|gb|EFR94349.1| integral membrane protein [Listeria innocua FSL J1-023]
Length = 344
Score = 82.1 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 98/234 (41%), Gaps = 24/234 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I ++ +W + L +F+G+ + F YQ + +
Sbjct: 107 IVILFIFWFGSILKNGSPILGMVVVFLMAFVGYFSFLFLSFLLSTFLYQFNF----PRYN 162
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDPQ 124
+ +++LG+G +P + SR+ + Y K + T I+SGG
Sbjct: 163 QDFLIVLGSGLIGGDRVPPL-------LASRLNRAIAFYEKQYDKKGKRATFIVSGGQGA 215
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAY 183
++E+ + L+ G++ + I +E +S++T QN QFS + + + L ++ +
Sbjct: 216 NETVSEAKAMRDYLISKGIDENFIIMEDKSVNTLQNMQFSKAKMDAIMPTYNSLFSTNNF 275
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
HL R+ LY + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 276 HLFRAGLYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 318
>gi|219666444|ref|YP_002456879.1| hypothetical protein Dhaf_0376 [Desulfitobacterium hafniense DCB-2]
gi|219536704|gb|ACL18443.1| protein of unknown function DUF218 [Desulfitobacterium hafniense
DCB-2]
Length = 258
Score = 82.1 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 94/240 (39%), Gaps = 42/240 (17%)
Query: 6 IFLIVSYWH------LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+FL+ W L Q + + + ++ + II ++L + +
Sbjct: 45 LFLLWGLWGDKFRNTLFSQRFPGLRKLIRWGIVLLLGSFFIIEGLILWNTEDR------- 97
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ G ++++LG G + S+ R+ + + + Q +++S
Sbjct: 98 --RPEQGKVLIILGAGLNGE--------QLSWTLRERVDKGVGILAENPQM----KVVVS 143
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-- 177
GG + E+ L+ G+ + I E +S T +N +FS ++ ++G +
Sbjct: 144 GGQGPGEWIPEAEAMAQYLIGQGIAPERILKEDRSTSTMENFRFSRVLLDQLEGFDPAEP 203
Query: 178 --LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++S +H+ RS++ + G+N + + I P + L+EY ++
Sbjct: 204 VLVITSDFHMFRSKILAERNGLNPVGVPC---STPWYIRPNAY--------LREYFAVVK 252
>gi|269925497|ref|YP_003322120.1| protein of unknown function DUF218 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789157|gb|ACZ41298.1| protein of unknown function DUF218 [Thermobaculum terrenum ATCC
BAA-798]
Length = 188
Score = 82.1 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 74/211 (35%), Gaps = 24/211 (11%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
M++ + +L++ + + + I++LG P
Sbjct: 1 MIIALLLVIVWFGNVLIE------IHKVGNTDNAVKSDAILVLGAA--------QYNGRP 46
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S +R+ + LYK + +++ GG + E+ LL G+ +
Sbjct: 47 SPVFRARLDHALALYKK----RLAPKVVVVGGKARGDTYTEADSGVRYLLRRGIPSSSLV 102
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
T+ + + + +M++ +++I+VS +H+ RS + G S + ++
Sbjct: 103 AVPHGRSTYSSLRAAKNMLQPKHVRSLIIVSDRFHMYRSLEMAKSLGFRVTGSPT--PDS 160
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
P + T ++E + G
Sbjct: 161 PIDKDPAAE----TRYVIREALAYTAYRISG 187
>gi|187776701|ref|ZP_02993174.1| hypothetical protein CLOSPO_00216 [Clostridium sporogenes ATCC
15579]
gi|187775360|gb|EDU39162.1| hypothetical protein CLOSPO_00216 [Clostridium sporogenes ATCC
15579]
Length = 324
Score = 82.1 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 92/240 (38%), Gaps = 31/240 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+L I I + S+ + F +L F T+L+ L
Sbjct: 96 MILGSILTIAGMYFFQDASVMRTLFSLVLILEFYI--TFTFSTLLIYSL------IYTCL 147
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++ G G S R+ + +R+Y C+QH I++SG
Sbjct: 148 PKRLNCAYIIVHGCGLIGGE-------RVSPLLKGRVDKAVRIYHKCRQH---PKIVVSG 197
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-LV 179
G ++E+ N L+E+G +DI LE QS TF+N + M+ K+ V
Sbjct: 198 GKGDDEKISEAAAMKNYLVETGFPEEDIILEEQSKTTFENLKNVRDMLDVNGVKHRYIFV 257
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI-LIAYY 238
++ YH+ R+ LY + I +A +Y ++EYI I +
Sbjct: 258 TNNYHVFRTSLYAKKLKIKASGVGCG-----------TAAYYWPSAFIREYIAIMFRYKW 306
>gi|16804480|ref|NP_465965.1| hypothetical protein lmo2442 [Listeria monocytogenes EGD-e]
gi|47096829|ref|ZP_00234410.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|224503412|ref|ZP_03671719.1| hypothetical protein LmonFR_13022 [Listeria monocytogenes FSL
R2-561]
gi|254828017|ref|ZP_05232704.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254831135|ref|ZP_05235790.1| hypothetical protein Lmon1_07233 [Listeria monocytogenes 10403S]
gi|254900420|ref|ZP_05260344.1| hypothetical protein LmonJ_11417 [Listeria monocytogenes J0161]
gi|254913341|ref|ZP_05263353.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937722|ref|ZP_05269419.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|255026377|ref|ZP_05298363.1| hypothetical protein LmonocytFSL_08615 [Listeria monocytogenes FSL
J2-003]
gi|255029934|ref|ZP_05301885.1| hypothetical protein LmonL_14269 [Listeria monocytogenes LO28]
gi|16411930|emb|CAD00520.1| lmo2442 [Listeria monocytogenes EGD-e]
gi|47014806|gb|EAL05758.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258600401|gb|EEW13726.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258610325|gb|EEW22933.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|293591346|gb|EFF99680.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 189
Score = 82.1 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P +P++ ++ R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVKGNPAVPSLVLQ------ERLDAAVAYLNEYPK----AKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S YH+ R+ + + GI+ + S F + ++E + I A+
Sbjct: 140 SDYHMYRALMLAKRQGIDASGLPA-----------TSQTFAKYKGMMREVLSITYAWV 186
>gi|303240608|ref|ZP_07327123.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
gi|302591845|gb|EFL61578.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
Length = 259
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 91/240 (37%), Gaps = 29/240 (12%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ F++ + L + R I + + II IL++ + +
Sbjct: 43 ITGLAFVVYAVIKLKKPAFRIIKHDILRRIAACLTVFCIIFFILIESI----IVLGGVDE 98
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +V+LG G PS R+ + + II+SGG
Sbjct: 99 SNTSVDYVVVLGAGLDSRDK-------PSGPLRLRLDKCIDYVSKNP----FVKIIVSGG 147
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
++E+ L+ +GV + +I +E QS +T +N + + ++I+N+ + +
Sbjct: 148 QGFDEEVSEAFAMKEYLVSNGVNQKNIIMEEQSTNTLENIKNTKALIENLPDEKSNNVLI 207
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +HL R+++ + FG IP L+E+ ++ ++
Sbjct: 208 VTNRFHLFRAKMLAERFGFKAYGMPC---ITPLYTIP--------NNYLREFFAVIKSWV 256
>gi|322807132|emb|CBZ04706.1| hypothetical protein H04402_02902 [Clostridium botulinum H04402
065]
Length = 351
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 93/237 (39%), Gaps = 24/237 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +FI + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFITFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKRQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-----KNIILVS 180
++E + + G+ + + +E Q+++T++N S +++ +V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSKKLLEEDYKAREKEYRCTVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIY 321
>gi|312903405|ref|ZP_07762585.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|310633281|gb|EFQ16564.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|315169828|gb|EFU13845.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315577610|gb|EFU89801.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 344
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG + E+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVTEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|167724440|ref|ZP_02407676.1| hypothetical protein BpseD_35802 [Burkholderia pseudomallei DM98]
Length = 143
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 80/126 (63%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
C I++SGGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + +
Sbjct: 2 DCKILVSGGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYR 61
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++LV+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+G
Sbjct: 62 ADRVLLVTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLG 121
Query: 233 ILIAYY 238
I
Sbjct: 122 IARYRL 127
>gi|153941422|ref|YP_001392099.1| hypothetical protein CLI_2871 [Clostridium botulinum F str.
Langeland]
gi|152937318|gb|ABS42816.1| putative membrane protein [Clostridium botulinum F str. Langeland]
gi|295320103|gb|ADG00481.1| putative membrane protein [Clostridium botulinum F str. 230613]
Length = 351
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 94/237 (39%), Gaps = 24/237 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +FI + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFITFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKRQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-----KNIILVS 180
++E + + G+ + + +E Q+++T++N S +++ I+V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSKKLLEEDHKAREKEYRCIVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIY 321
>gi|315168937|gb|EFU12954.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
Length = 344
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|307273126|ref|ZP_07554372.1| hypothetical protein HMPREF9514_01892 [Enterococcus faecalis
TX0855]
gi|306510111|gb|EFM79135.1| hypothetical protein HMPREF9514_01892 [Enterococcus faecalis
TX0855]
Length = 360
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|224500115|ref|ZP_03668464.1| hypothetical protein LmonF1_10719 [Listeria monocytogenes Finland
1988]
Length = 189
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P +P++ ++ R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVKGNPAVPSLVLQ------ERLDAAVAYLNEYPK----AKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S YH+ R+ + + GI+ + S F + ++E + I A+
Sbjct: 140 SDYHMYRALMLAKRQGIDASGLPA-----------TSQTFAKYKGMMREVLSITYAWV 186
>gi|116873811|ref|YP_850592.1| hypothetical protein lwe2395 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742689|emb|CAK21813.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 189
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 80/219 (36%), Gaps = 36/219 (16%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R+IFF+ I I+ + + + + + +++LG
Sbjct: 4 LRRIFFILIISGCIYLI---IVGAFMYSG---------MRAKPVEAADTVLILGAKVEGD 51
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + PS R+ E + + +++SGG E+ V L+
Sbjct: 52 PAV------PSLVLKERLDEAVTYLNDYPKT----KVVVSGGQGADERTTEASVMEEYLV 101
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ R+ I+ E +S T +N ++S+ ++VSS YH+ R+ + GI+
Sbjct: 102 NEGIARNRIETENKSKRTEENIKYSNE---KFDLGKTVIVSSDYHMYRALMLANRQGIDV 158
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + +++E + I A+
Sbjct: 159 SGLPAKSRTPAKY-----------KGSMREVLSITYAWV 186
>gi|223933030|ref|ZP_03625024.1| protein of unknown function DUF218 [Streptococcus suis 89/1591]
gi|302023799|ref|ZP_07249010.1| membrane protein [Streptococcus suis 05HAS68]
gi|330832826|ref|YP_004401651.1| hypothetical protein SSUST3_1032 [Streptococcus suis ST3]
gi|223898347|gb|EEF64714.1| protein of unknown function DUF218 [Streptococcus suis 89/1591]
gi|329307049|gb|AEB81465.1| protein of unknown function DUF218 [Streptococcus suis ST3]
Length = 336
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 97/233 (41%), Gaps = 25/233 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + Y + ++ + +S ++F ++G+ + I++ L + +
Sbjct: 102 MGLAVALTFYLFIAPFVVQSLSGISLLNMVFVYVGFLVSYAIIISMLYTTSSFVNFVNLF 161
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +V+LG G P + SRI + + +Y+ +I+SGG
Sbjct: 162 PGKLDYVVVLGAGLIGDKVTPLL--------ASRIDKGIAIYQKQP----GSKLIMSGGQ 209
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+AE N LE G+ +DI +E QS +T +N +FS +++K G LV++
Sbjct: 210 GPDELIAEGQAMANYALEQGIPAEDIIIENQSTNTEENLKFSYALMKP--GSRFALVTNY 267
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
YH+ R+ L + I + + ++ ++E++G ++
Sbjct: 268 YHVFRALLLARQLKIKCIGYGA-----------KTKFYFSLNAFIREFVGYVV 309
>gi|326563988|gb|EGE14237.1| hypothetical protein E9K_05094 [Moraxella catarrhalis 103P14B1]
gi|326569481|gb|EGE19541.1| hypothetical protein E9U_07596 [Moraxella catarrhalis BC8]
gi|326577008|gb|EGE26903.1| hypothetical protein E9Y_00691 [Moraxella catarrhalis 101P30B1]
gi|326577466|gb|EGE27350.1| hypothetical protein EA1_03565 [Moraxella catarrhalis O35E]
Length = 252
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 84/220 (38%), Gaps = 20/220 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S++ I +L+ I L L Y L+ D IV+LG G T
Sbjct: 21 KSLKFIAVGGTVILIGIASALTPIFANLGVGLLNLYSALTLATVQ-DDATSIVVLGGGLT 79
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A I + + SR + L+K +II SG AES +
Sbjct: 80 KN---SAGTISLNHFTQSRANAAIHLHKLYP-----LSIITSG--------AESPWLRDY 123
Query: 138 LLESGVERDD-IKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYFQHF 195
L+E I E S++T +NA F++ ++ + + LV+ YH+ R++ F
Sbjct: 124 LIEHIGRTKVVIINENASMNTCENAVFTAKLLSHHELSTTVYLVTDRYHMARARRQFAKA 183
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
GI+T + + L S N T + E + +
Sbjct: 184 GIHTIPAPAP-LAIRSSWQNPKDNLIHTRRTIYELVALAR 222
>gi|326561612|gb|EGE11950.1| hypothetical protein E9M_05753 [Moraxella catarrhalis 46P47B1]
gi|326567638|gb|EGE17746.1| hypothetical protein E9O_00430 [Moraxella catarrhalis 12P80B1]
gi|326574024|gb|EGE23973.1| hypothetical protein E9W_05894 [Moraxella catarrhalis CO72]
Length = 252
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 85/220 (38%), Gaps = 20/220 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S++ I S +L+ I L L Y L+ D IV+LG G T
Sbjct: 21 KSLKFIAVGSTVILIGIASALTPIFANLGVGLLNLYSALTLATVQ-DDATSIVVLGGGLT 79
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A I + + SR + L+K +II SG AES +
Sbjct: 80 KN---SAGTISLNHFTQSRANAAIHLHKLYP-----LSIITSG--------AESPWLRDY 123
Query: 138 LLESGVERDD-IKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYFQHF 195
L+E I E S++T +NA F++ ++ + + LV+ YH+ R++ F
Sbjct: 124 LIEHIGRTKVVIINENASMNTCENAVFTAKLLSHHELSTTVYLVTDRYHMARARRQFAKA 183
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
GI+T + + L S N T + E + +
Sbjct: 184 GIHTIPAPAP-LAIRSSWQNPKDNLIHTRRTIYELVALAR 222
>gi|320527634|ref|ZP_08028808.1| hypothetical protein HMPREF9430_00919 [Solobacterium moorei F0204]
gi|320131955|gb|EFW24511.1| hypothetical protein HMPREF9430_00919 [Solobacterium moorei F0204]
Length = 268
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
G+ ++ L+ Y + D + +V+LG G + P+ +
Sbjct: 64 FGFSVLYISLVFVAFMFYSMFIQLLPRHVDFDYVVVLGAGLIDG-------LRPTKLLAN 116
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + +R++ I++SGG ++E+ L++ G++ I +E +S+
Sbjct: 117 RLDKAIRVFNKSVSSCY---IVVSGGQGSDEKVSEAEAMRTYLIDKGIKNHQIIMEDKSV 173
Query: 156 DTFQNAQFSSSMIKNMQGKNII-LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
+TFQN + S +IK G+ I +V+S +H+ R+ L + I +
Sbjct: 174 NTFQNMRNSYEIIKRRGGRMRIAVVTSNFHVYRALLLCRSLDIPAIGIGA---------- 223
Query: 215 PLSANFYLTELALKEYIGILIAYYRG 240
A ++ ++EY+ + Y +G
Sbjct: 224 -PIAFYFWPSAMIREYVALCKHYLKG 248
>gi|315155656|gb|EFT99672.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
Length = 344
Score = 81.8 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|304404431|ref|ZP_07386092.1| protein of unknown function DUF218 [Paenibacillus curdlanolyticus
YK9]
gi|304346238|gb|EFM12071.1| protein of unknown function DUF218 [Paenibacillus curdlanolyticus
YK9]
Length = 230
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 15/185 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + + + +G +L L +RPL P+ ++I++LG
Sbjct: 10 ARRRRKRSPLLLLFRIVAWMIVLGVLWCGYLLW--LINDVKRPL--PRSLPKADVIIVLG 65
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
P ++ R+ LYK K + I+ G D + E+
Sbjct: 66 AALWSDKPSPGLK--------ERLDYAFGLYKLGKADKL---ILTGGLDGNGSTITEAEG 114
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L G+ D + +E ++ T++N FS + K +++V+ YH R+ +
Sbjct: 115 MRRYLTARGIPNDKLLIENKATSTYENLLFSKQITDRGGMKQVLIVTHDYHSSRAAEIAR 174
Query: 194 HFGIN 198
+ G N
Sbjct: 175 YVGFN 179
>gi|322435976|ref|YP_004218188.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321163703|gb|ADW69408.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 218
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 18/208 (8%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L + ++ + + + + + I + G PS
Sbjct: 25 FLLWCFCFLVLAAMGWSSWVVRQINLVAAQDQAQPADAIAVFGAAEYSG--------RPS 76
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
++R+ + LY+ I GG + G E V + LL +G+ D I
Sbjct: 77 PVYHARLDHAVTLYRKQIAP---IVITFGGGSDKDSGKTEGGVGRDYLLANGIPFDKIIA 133
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
ET S+DT Q + + + + +I+LVS HL R Q + G++ +
Sbjct: 134 ETHSVDTEQQVELLAQIAEENNLSHIVLVSDNTHLFRIQELCRRAGLDVY-------TSP 186
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYY 238
+ ++ L E +
Sbjct: 187 RPALGHIDSYDLFMRYFHEVLSYTAMRL 214
>gi|226224989|ref|YP_002759096.1| hypothetical protein Lm4b_02410 [Listeria monocytogenes Clip81459]
gi|254825437|ref|ZP_05230438.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254853556|ref|ZP_05242904.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254933133|ref|ZP_05266492.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|255519961|ref|ZP_05387198.1| hypothetical protein LmonocFSL_01797 [Listeria monocytogenes FSL
J1-175]
gi|300765230|ref|ZP_07075215.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|225877451|emb|CAS06165.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606929|gb|EEW19537.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|293584691|gb|EFF96723.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293594680|gb|EFG02441.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300514051|gb|EFK41113.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|328471359|gb|EGF42256.1| hypothetical protein LM220_10065 [Listeria monocytogenes 220]
gi|332312871|gb|EGJ25966.1| hypothetical protein LMOSA_4070 [Listeria monocytogenes str. Scott
A]
Length = 189
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 73/178 (41%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P +P++ ++ R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVNGTPAVPSLVLQ------ERLDAAVAYLNEYPK----AKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S YH+ R+ + + GI+ + F + ++E + I A+
Sbjct: 140 SDYHMYRALMLAKRQGIDASGLPATSKT-----------FAKYKGMMREVLSITYAWV 186
>gi|307277969|ref|ZP_07559053.1| hypothetical protein HMPREF9515_00304 [Enterococcus faecalis
TX0860]
gi|306505366|gb|EFM74552.1| hypothetical protein HMPREF9515_00304 [Enterococcus faecalis
TX0860]
Length = 344
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|46908614|ref|YP_015003.1| hypothetical protein LMOf2365_2414 [Listeria monocytogenes serotype
4b str. F2365]
gi|47093642|ref|ZP_00231398.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|46881886|gb|AAT05180.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
str. F2365]
gi|47017977|gb|EAL08754.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|328465305|gb|EGF36562.1| hypothetical protein LM1816_14015 [Listeria monocytogenes 1816]
Length = 189
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 73/178 (41%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P +P++ ++ R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVNGTPAVPSLVLQ------ERLDAAVAYLNEYPK----AKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S YH+ R+ + + GI+ + F + ++E + I A+
Sbjct: 140 SDYHMYRALMLAKRQGIDASGLPATSKT-----------FAKYKGMMREVLSITYAWV 186
>gi|315145143|gb|EFT89159.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
gi|315162313|gb|EFU06330.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
Length = 344
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|29376218|ref|NP_815372.1| hypothetical protein EF1664 [Enterococcus faecalis V583]
gi|227518851|ref|ZP_03948900.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227553467|ref|ZP_03983516.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229545724|ref|ZP_04434449.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|229549915|ref|ZP_04438640.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|293382896|ref|ZP_06628814.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|293389615|ref|ZP_06634072.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|300860845|ref|ZP_07106932.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307274861|ref|ZP_07556024.1| hypothetical protein HMPREF9521_00474 [Enterococcus faecalis
TX2134]
gi|307291900|ref|ZP_07571769.1| hypothetical protein HMPREF9509_02197 [Enterococcus faecalis
TX0411]
gi|312899511|ref|ZP_07758841.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312907633|ref|ZP_07766624.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312910250|ref|ZP_07769097.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|312951594|ref|ZP_07770490.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|29343681|gb|AAO81442.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227073700|gb|EEI11663.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227177402|gb|EEI58374.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229304988|gb|EEN70984.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|229309174|gb|EEN75161.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|291079561|gb|EFE16925.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|291081232|gb|EFE18195.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|300849884|gb|EFK77634.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306496898|gb|EFM66446.1| hypothetical protein HMPREF9509_02197 [Enterococcus faecalis
TX0411]
gi|306508309|gb|EFM77416.1| hypothetical protein HMPREF9521_00474 [Enterococcus faecalis
TX2134]
gi|310626661|gb|EFQ09944.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310630560|gb|EFQ13843.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|311289523|gb|EFQ68079.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311293381|gb|EFQ71937.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315027821|gb|EFT39753.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315029286|gb|EFT41218.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
gi|315034068|gb|EFT46000.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
gi|315147360|gb|EFT91376.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315152384|gb|EFT96400.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315158173|gb|EFU02190.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|315575767|gb|EFU87958.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315580419|gb|EFU92610.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|327535229|gb|AEA94063.1| hypothetical protein OG1RF_11376 [Enterococcus faecalis OG1RF]
Length = 344
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|72161268|ref|YP_288925.1| hypothetical protein Tfu_0864 [Thermobifida fusca YX]
gi|71915000|gb|AAZ54902.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 315
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 77/222 (34%), Gaps = 26/222 (11%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
SI +I + +L+ + I T + + IV+LG
Sbjct: 110 SIGRIVRRTVALLVLTVI-LLPCATWAW-------VWYTARQDERPPSDAIVVLGA---- 157
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS +R+ LY+ T++ GG+ E L
Sbjct: 158 ----SQYNGRPSPVFEARLRHAAHLYEEGVA----PTVVTVGGNQPGDNFTEGGSGARWL 209
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+E GV D + + DT ++ + + + + + ++VS +H RS+ + FGI
Sbjct: 210 VEQGVPADSVIPIGKGSDTLESLELVAQVFEERGWRTAVIVSDPWHSLRSREIAEDFGIE 269
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
S + + + + +Y+T +E + + G
Sbjct: 270 AATSPA--RSGPAVLERETQLWYIT----RETASLWHYWIFG 305
>gi|224542305|ref|ZP_03682844.1| hypothetical protein CATMIT_01484 [Catenibacterium mitsuokai DSM
15897]
gi|224524754|gb|EEF93859.1| hypothetical protein CATMIT_01484 [Catenibacterium mitsuokai DSM
15897]
Length = 210
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 79/234 (33%), Gaps = 36/234 (15%)
Query: 10 VSYWHLLCQ--SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ W + I K + +++ + + ++ +
Sbjct: 1 MFLWRIFSSAMKILKKLIIIVALVICYVFSN-AVSIYIYSF-----------KDDARNAD 48
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ ++LG T PS RI + LY II++GG + +
Sbjct: 49 VAIVLGASTYNG--------HPSPVYQERINHAVDLYNKHLVK----KIIMTGGYGKGNP 96
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++++ + GV DD+ E QS T +N + ++ + ++VS H+KR
Sbjct: 97 VSDAYNAKLYAVSQGVPEDDVLTEDQSTVTLENLINAKKIMDVYNYQTALIVSDPLHMKR 156
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE---YIGILIAYY 238
+ L + GI S + + + + + +E YIG
Sbjct: 157 AMLQAKDAGIIAYTSPT-HSSRFRTRDTKFKFLK------REVINYIGYKWYRL 203
>gi|168179334|ref|ZP_02613998.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226950331|ref|YP_002805422.1| hypothetical protein CLM_3296 [Clostridium botulinum A2 str. Kyoto]
gi|182669557|gb|EDT81533.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226841604|gb|ACO84270.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 198
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 38 SQPQKSDSIIILGCKVKGNDPTPFLK--------RRLDEGLRLYNEGYGKY----IIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ L++ G+++ I LE +S +T +N +FS +++ + I+VS
Sbjct: 86 AKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVS 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHLKR++L Q GI +Y + S + L+E +L+ Y +
Sbjct: 146 NKYHLKRAELLCQKEGIKA---------SYSGVFVRSHMSHEIMGFLREIPALLVYYIK 195
>gi|307289203|ref|ZP_07569159.1| hypothetical protein HMPREF9505_02573 [Enterococcus faecalis
TX0109]
gi|306499912|gb|EFM69273.1| hypothetical protein HMPREF9505_02573 [Enterococcus faecalis
TX0109]
gi|315164112|gb|EFU08129.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
Length = 343
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 152 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 199
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 200 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 259
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 260 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 308
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 309 ALIREYIALLV 319
>gi|3056882|gb|AAC14002.1| unknown [Actinosynnema pretiosum subsp. auranticum]
Length = 336
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 84/215 (39%), Gaps = 24/215 (11%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ ++ LF G+ L Y + + IV+LG G P
Sbjct: 123 WVLAAAGSLFLLAGYLGFAFTLFLL----YSVLYGRVRKRTGHTAIVVLGAGVPGGRVTP 178
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ R+ ++LY+ ++ SGG +E+ V N L E G+
Sbjct: 179 LL--------AGRLDRALKLYRRAAAKGASPLVVASGGQGPDEPASEAEVMANYLRERGI 230
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL-VSSAYHLKRSQLYFQHFGINTKAS 202
+ + E +S T++N + SS+++ +L V+S+YH+ R+ + + G+
Sbjct: 231 PDEALLEERESTSTWENLRLSSALLAERGVTGRLLVVTSSYHVPRAAILSRRAGLK---- 286
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+D + +++ L+E+ +L+ Y
Sbjct: 287 -ADVRGGRTAW------YFVPNAFLREFAALLVQY 314
>gi|299534489|ref|ZP_07047822.1| hypothetical protein BFZC1_00605 [Lysinibacillus fusiformis ZC1]
gi|298730117|gb|EFI70659.1| hypothetical protein BFZC1_00605 [Lysinibacillus fusiformis ZC1]
Length = 338
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 98/240 (40%), Gaps = 28/240 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L F+I+ W++ I + ++F+ +G + L +Y L
Sbjct: 100 ILGLSFVIMMIWYVFVIFIEIENVFWHILFFYAFLIFGYT--MFLYTSVLAYSILYLLTP 157
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + N I+ LG+G P + SR+ E ++ Y M II+SGG
Sbjct: 158 IRYEPNYIIALGSGLIGDTVPPLL--------ASRLDEAVKQYIKY---EMKPYIIVSGG 206
Query: 122 DPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
++E+ L+E + D I +E +S +T QN FS ++ +
Sbjct: 207 QGNDEKVSEAYAMKQYLIEVHHIPTDKIVMEDRSANTEQNMIFSKQIMDHHSHGENYRSI 266
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V++ +H+ R+ +Y + ++ + S +A +Y+ +E+IG+L Y
Sbjct: 267 FVTNNFHVFRASIYARKAALDAEGIGS-----------KTAFYYVPNAFTREFIGLLAMY 315
>gi|326572756|gb|EGE22742.1| hypothetical protein E9S_00375 [Moraxella catarrhalis BC7]
Length = 252
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 83/220 (37%), Gaps = 20/220 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S++ I +L+ I L L Y L+ D IV+LG G T
Sbjct: 21 KSLKFIAVGGTVILIGIASALTPIFANLGVGLLNLYSALTLATVQ-DDATSIVVLGGGLT 79
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A I + + SR + L+K +II SG AES +
Sbjct: 80 KN---SAGTISLNHFTQSRANAAIHLHKLYP-----LSIITSG--------AESPWLRDY 123
Query: 138 LLESGVERDD-IKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYFQHF 195
L E I E S++T +NA F++ ++ + + LV+ YH+ R++ F
Sbjct: 124 LTEHIGRTKVVIINENASMNTCENAVFTAKLLSHHELSTTVYLVTDRYHMARARRQFAKA 183
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
GI+T + + L S N T + E + +
Sbjct: 184 GIHTIPAPAP-LAIRSSWQNPKDNLIHTRRTIYELVALAR 222
>gi|228990732|ref|ZP_04150697.1| hypothetical protein bpmyx0001_14940 [Bacillus pseudomycoides DSM
12442]
gi|228769258|gb|EEM17856.1| hypothetical protein bpmyx0001_14940 [Bacillus pseudomycoides DSM
12442]
Length = 193
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 82/228 (35%), Gaps = 36/228 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++ + + + M++ +IG+ + D + ++LLG
Sbjct: 1 MIKKKKMMKYSLVVIMIIVGYIGFL-----------QYNIYKHGHMEAPNDADYMILLGA 49
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+++ RI + + +I+SGG + ++E+
Sbjct: 50 KVKGTEPSYSLQY--------RIDKAAE----YLKTHEQTIVIVSGGKGKGEDISEARAM 97
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ + I +E +S +T +N +FS S+I K ++V++ +H+ R++ +
Sbjct: 98 KKGLMTQSIAEQRIIMEDRSTNTDENIEFSKSLI-PANKKKGMIVTNDFHMFRAKKIAEK 156
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + + + ++EY I + NR
Sbjct: 157 QGLKVNGLPAKTPKSII-----------IQSNVREYFAITQYWLT-NR 192
>gi|152989850|ref|YP_001355572.1| hypothetical protein NIS_0098 [Nitratiruptor sp. SB155-2]
gi|151421711|dbj|BAF69215.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 233
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 29/242 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL + ++ L + +K+ FM + + I LL L+ P
Sbjct: 13 LLPPALFVWGFFLLGFKHYKKVAFMLALL--LYLLSTDIAGRWLLAPLENWKFAP----- 65
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +V+LG G P S S RI + L K + T + +
Sbjct: 66 SNVEPKYVVVLGGGYDRGKFFPT-----SASSTERILTGL-LTAQQKGLPLLFTGLEAE- 118
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + L ++ + I+ E +SL+T+QNA F++ + K+I LV+S
Sbjct: 119 --------YAKRTIHTLQKTFSLKLSIRYEVKSLNTYQNAAFTAQ---KLPQKSICLVTS 167
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAY 237
AYH+ R+ F+HFG + DY + + P + +A+ EY+G+L
Sbjct: 168 AYHMPRAYKLFRHFGFSITPVSCDYQTKDDIKVWDLFPSMEGLKKSYIAIHEYVGLLSLI 227
Query: 238 YR 239
R
Sbjct: 228 LR 229
>gi|170756849|ref|YP_001782427.1| hypothetical protein CLD_1753 [Clostridium botulinum B1 str. Okra]
gi|169122061|gb|ACA45897.1| putative membrane protein [Clostridium botulinum B1 str. Okra]
Length = 351
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 94/237 (39%), Gaps = 24/237 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +FI + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFITFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKRQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-----KNIILVS 180
++E + + G+ + + +E Q+++T++N S +++ I+V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSKKLLEEDYKAREKEYRCIVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIY 321
>gi|315172207|gb|EFU16224.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 344
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ +R+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------NRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKKPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|229494703|ref|ZP_04388461.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229318370|gb|EEN84233.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length = 336
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 97/228 (42%), Gaps = 27/228 (11%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++ LL Q + F L+ S++G+ +L Y +++ +
Sbjct: 107 VLLASALLTQRYWLAVVLGSFSLVASYLGFLFTSFLL-------YSYVYGRQKYQPGMDA 159
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+ G G + P + SR+ + ++++ + +++SGG +
Sbjct: 160 IVVHGAGLSGADVTPLL--------ASRLDKAADVFRAEVREGRSPLLVVSGGKGSDEVV 211
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSSAYHLKR 187
+E+ L++ G+ R+ + LE +S T +N +++ +++ ++LV+S +H+ R
Sbjct: 212 SEAEAMCVYLVDHGIPRESVILEDRSTTTLENLEYTRDLLRANTTKPRMVLVTSNFHILR 271
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + + ++ + S +A +YL L+E+ + +
Sbjct: 272 TATFARSLDLDAEVIGS-----------HTARYYLPSAILREFAAVTV 308
>gi|269127423|ref|YP_003300793.1| hypothetical protein Tcur_3216 [Thermomonospora curvata DSM 43183]
gi|268312381|gb|ACY98755.1| protein of unknown function DUF218 [Thermomonospora curvata DSM
43183]
Length = 244
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 76/213 (35%), Gaps = 20/213 (9%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+L + GI+ ++L L ++ + + IV+LG P +R
Sbjct: 34 LLWTVAVLLGILAVVVLTPLTVGWRVWYQARQDETPKSDAIVVLGAAQYNGVPSPTLRW- 92
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL-ESGVERDD 147
R+ ++LY+ + I+ GG E+ N L+ E V D
Sbjct: 93 -------RLEHAVKLYRRGVAPA----IVTVGGKQPGDNYTEADAGRNWLIKERQVPADK 141
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+ DT ++ Q + + ++ + +LV+ +H RS+ Q GI AS +
Sbjct: 142 VVAVPVGSDTLESMQAVGAKFRELKWHSAVLVTDPWHGLRSKKMAQDQGIKAAASPTRSG 201
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + ++E G L G
Sbjct: 202 PSVQTRD------TQFHYIVRETGGYLSYVLFG 228
>gi|153938260|ref|YP_001392181.1| hypothetical protein CLI_2956 [Clostridium botulinum F str.
Langeland]
gi|152934156|gb|ABS39654.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
Length = 197
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 38 SQPQKSDSIIILGCKVKGNDPTPFLK--------RRLDEGLRLYNEGYGKY----IIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ L++ G+++ I LE +S +T +N +FS +++ + I+VS
Sbjct: 86 AKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVS 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHLKR++L Q GI +Y + S + L+E +L+ Y +
Sbjct: 146 NKYHLKRAELLCQKEGI---------RASYSGVFVRSHMSHEIMGFLREIPALLVYYIK 195
>gi|260438932|ref|ZP_05792748.1| putative membrane protein [Butyrivibrio crossotus DSM 2876]
gi|292808583|gb|EFF67788.1| putative membrane protein [Butyrivibrio crossotus DSM 2876]
Length = 258
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 97/245 (39%), Gaps = 29/245 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFF---MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
++++L ++ + +C + I +S + I I+L + +
Sbjct: 36 FAFVWLGMALFFAVCGAAVFILGKRNVSLPPAVKVVISVLAAAIIILFAVVEGMIISGMK 95
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + + +++LG ++R R+ + + + + +++S
Sbjct: 96 EKTNEQYDYVIVLGARVRGTTVTKSLR--------KRLDKA----FEYIEKNDNTILVLS 143
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
GG ++E+ + L++ GV++ + LE +S T +N ++S +I+ +
Sbjct: 144 GGQGNGEDVSEAQAMYDYLVQKGVDKSRLLLEDKSTSTVENIEYSMKIIEKNSQNATVEV 203
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+++ +H+ R++L ++ G + K + S N L +E+ ++
Sbjct: 204 GFITNNFHVFRAELVCRNMGYDIKGIPA-----------KSDNKLLVNYMFREFFALVKY 252
Query: 237 YYRGN 241
GN
Sbjct: 253 KITGN 257
>gi|148380781|ref|YP_001255322.1| hypothetical protein CBO2822 [Clostridium botulinum A str. ATCC
3502]
gi|153934201|ref|YP_001385066.1| hypothetical protein CLB_2765 [Clostridium botulinum A str. ATCC
19397]
gi|153935183|ref|YP_001388535.1| hypothetical protein CLC_2698 [Clostridium botulinum A str. Hall]
gi|148290265|emb|CAL84385.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502]
gi|152930245|gb|ABS35745.1| putative membrane protein [Clostridium botulinum A str. ATCC 19397]
gi|152931097|gb|ABS36596.1| putative membrane protein [Clostridium botulinum A str. Hall]
Length = 351
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 94/237 (39%), Gaps = 24/237 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +FI + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFITFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKKQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-----KNIILVS 180
++E + + G+ D + +E ++++T++N S +++ I+V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPTDHMIIEDKAVNTYENLYNSRKLLEEDYKTREKEYRCIVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIY 321
>gi|170758739|ref|YP_001788223.1| hypothetical protein CLK_2294 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405728|gb|ACA54139.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 197
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 38 SQPQKSDSIIILGCKVKGNDPTPFLK--------RRLDEGLRLYNEGYGKY----IIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ L++ G+++ I LE +S +T +N +FS +++ + I+VS
Sbjct: 86 AKGPGENISEAEAMEKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVS 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHLKR++L Q GI +Y + S + L+E +L+ Y +
Sbjct: 146 NKYHLKRAELLCQKEGIKA---------SYSGVFVRSHMSHEIMGFLREIPALLVYYIK 195
>gi|33152333|ref|NP_873686.1| hypothetical protein HD1239 [Haemophilus ducreyi 35000HP]
gi|33148556|gb|AAP96075.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 256
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 16/220 (7%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
F + L++ + F L+ + + IV+LG G +
Sbjct: 46 FCTILNITTLYLYSTPYFSQKLIQAVSF---SEKLTIEEYRQAQAIVVLGGGVRNSRELF 102
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
A + R+ L+K + ++ G E+ + +
Sbjct: 103 A-DYAIAATPLERMRYAAYLHKQTRLP------VLVTGGSPTGKQPEANIMAQEFANF-F 154
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ +E+ S T +NA + +++ IILV++ +H+KR+++ F+ G N A+
Sbjct: 155 DVQVKWIESASNITEENAHLTKAILDKEGITKIILVTNEWHMKRAKMLFEREGFNVLAAS 214
Query: 204 SD-----YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + IP + + +ALKE++G
Sbjct: 215 TSSYEGLNIIGVLPFIPQAIAMQNSSIALKEWLGYWKVKL 254
>gi|300716091|ref|YP_003740894.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
gi|299061927|emb|CAX59043.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 262
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 85/242 (35%), Gaps = 20/242 (8%)
Query: 8 LIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ ++ L +K +S LL + + + LL + Y +
Sbjct: 23 MAIALLLLWFSRWQKTGKIILSAACLLLALLSLQPVADNLLAPTENRYPTWQNQQKVGYV 82
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ G A S R+ E +RL++ +I +G Q
Sbjct: 83 VVL-----GGGYTWNPDWAPGSNMINNSLPRLVEGIRLWRENP----GAKLIFTGAAAQN 133
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ ++ + V + GV I + DT Q A + ++ +LV+SA HL
Sbjct: 134 NPVSSAEVTSRVAQSLGVPLSAIVTLDKPRDTRQEAAEVAKVVGK---TPFLLVTSASHL 190
Query: 186 KRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ ++FQ G++ + ++ LN + IP ++ A+ E++G
Sbjct: 191 PRAMIFFQQQGLDPLPAPANQLAIDSPLNVWERAIPSPLWLGHSDRAIYEWLGRGWQRLT 250
Query: 240 GN 241
Sbjct: 251 SG 252
>gi|254992747|ref|ZP_05274937.1| hypothetical protein LmonocytoFSL_06569 [Listeria monocytogenes FSL
J2-064]
Length = 189
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG T P +P++ ++ R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVTGTPAVPSLVLQ------ERLDAAVAYLNEYPK----AKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S YH+ R+ + + GI+ + F + ++E + I A+
Sbjct: 140 SDYHMYRALMLAKRQGIDASGLPATSKT-----------FAKYKGMMREVLSITYAWV 186
>gi|240146766|ref|ZP_04745367.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|257201050|gb|EEU99334.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|291536643|emb|CBL09755.1| Uncharacterized conserved protein [Roseburia intestinalis M50/1]
gi|291541019|emb|CBL14130.1| Uncharacterized conserved protein [Roseburia intestinalis XB6B4]
Length = 256
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/240 (15%), Positives = 80/240 (33%), Gaps = 24/240 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+S L + I + ++ +++ L ++ +
Sbjct: 37 ILISLFLLCYGIFFGRMNRRALILWNGRKTHWICVFLLVLVLIMIMTVLAETFLMIHSAL 96
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
V+LG PS RI + I+SG
Sbjct: 97 HTPPQNTTAVVLGCSVKGTK--------PSRILEERIDAAYD----YLSVNKDAVCILSG 144
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILV 179
G + E+ L + G+ + + LE +S T +N +++ ++K+ + LV
Sbjct: 145 GRGPGEDITEAQCMYEVLTKRGISENRLILEERSTTTEENLKYTGEILKDRGLDMTVTLV 204
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+S +H R+ G+ + ++ + + ++ P ++E GIL R
Sbjct: 205 TSEFHEYRANQMAARLGMKSYSTPA---HTFFVYFP--------TYYVRELYGILYYELR 253
>gi|170755560|ref|YP_001782537.1| hypothetical protein CLD_1642 [Clostridium botulinum B1 str. Okra]
gi|169120772|gb|ACA44608.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
Length = 197
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 38 SQPQKSDSIIILGCKVKGNDPTPFLK--------RRLDEGLRLYNEGYGKY----IIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ L++ G+++ I LE +S +T +N +FS +++ + I+VS
Sbjct: 86 AKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVS 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHLKRS+L Q GI +Y + S + L+E +L+ Y +
Sbjct: 146 NKYHLKRSELLCQKEGIKA---------SYSGVFVRSHMSHEIMGFLREIPALLVYYIK 195
>gi|324998494|ref|ZP_08119606.1| hypothetical protein PseP1_06982 [Pseudonocardia sp. P1]
Length = 334
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 91/236 (38%), Gaps = 30/236 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ I ++ L + ++ +LL + + T L +Y
Sbjct: 102 LACIVVLALPVATLYDDGHVLGAITIALLLLTVYVAFLFCTFL------TYAVVYGRLAA 155
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +V+LG G P +R SR+ + L + ++ SGG
Sbjct: 156 RPGVDFVVVLGAGLIRGKVTPLLR--------SRLDRAIALRERETGTGNDPVLVTSGGR 207
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSS 181
+AE+ LLE GV D + E +S T +N F+ ++ + G ++V++
Sbjct: 208 GPDEPVAEAEAMAGYLLEQGVPEDAVLREDRSRTTLENLTFTDRLMADRVPGYRCVVVTN 267
Query: 182 AYHLKRSQLYFQHFGIN--TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+H+ R+ L + G++ S + A +YL ++E++ IL
Sbjct: 268 NFHVFRTALLARQSGVDGHVLGSPT-------------ARYYLPSATIREFVAILA 310
>gi|219668605|ref|YP_002459040.1| hypothetical protein Dhaf_2577 [Desulfitobacterium hafniense DCB-2]
gi|219538865|gb|ACL20604.1| protein of unknown function DUF218 [Desulfitobacterium hafniense
DCB-2]
Length = 223
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 38/222 (17%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIP-TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ I + +++F G ++ + Y + P + I++LG
Sbjct: 2 KTKVIRLLQLLVIVFLVGGLSVLSINFYVHSFSAKYIVTMDKP--LPQTDAILVLGAYFN 59
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P+ + R+ +Y II GD + E +
Sbjct: 60 PNTGKPSDML------GDRLETAYEVYTKNPDTK-----IIVSGDHGRKEYDEVNGMKDY 108
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV + I ++ T+++ + + + I+V+ YHL R+ + GI
Sbjct: 109 LMAKGVPDEHIFMDHAGFSTYESMYRAKEIFQVQSL---IVVTQDYHLYRAIFDSRKMGI 165
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +D Y+GI R
Sbjct: 166 ESYGVIADKRY---------------------YLGINYYKLR 186
>gi|311697190|gb|ADQ00062.1| protein containing DUF218 [marine bacterium HP15]
Length = 159
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 85 IRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ P+ +S R++ RL+ + K +++ G A S + + V
Sbjct: 7 GELYPNLESGADRVWHAARLFNASKA-----PLVLLTGGSDPSHSAASEAMRQFMRDLRV 61
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ LE++S +T QNA++S+ ++ I+LV+ AYH+ R++ F+ G+
Sbjct: 62 PGQALVLESRSRNTSQNAEYSAEILTEQGVNRILLVTFAYHMPRAKALFEAQGLEVILVA 121
Query: 204 SDY----LNAYYSIIPLSANFYLTELALKEYIGILI 235
+D+ + S++P ++ + +KE +G L+
Sbjct: 122 TDHEVLSRPLWRSLLPETSALDGSSRVIKEIVGRLV 157
>gi|326796792|ref|YP_004314612.1| hypothetical protein Marme_3563 [Marinomonas mediterranea MMB-1]
gi|326547556|gb|ADZ92776.1| protein of unknown function DUF218 [Marinomonas mediterranea MMB-1]
Length = 255
Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 81/207 (39%), Gaps = 14/207 (6%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
W + L+ ++ Y + +++++LG+G +PA+ + + R
Sbjct: 53 SWSPVANRLIATVESEYSVF----DIAQPVDVVIVLGSGHNEYVNMPAVM-QLGRSAIFR 107
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ E +R+ ++ + G + + +E G+ I + D
Sbjct: 108 LEEGLRILRANPSAR-----LFVSGYGAGGKTPHAEILKQAAIELGIAPTRIITFPLAKD 162
Query: 157 TFQNAQFSS---SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-NAYYS 212
T A+ + K I LV+ A HLKR+ ++++ INT + + L +
Sbjct: 163 TEDEARMMASFLKDDKERTNNRIALVTEASHLKRAMRFYRNEDINTLPAPAFKLGASESD 222
Query: 213 IIPLSANFYLTELALKEYIGILIAYYR 239
+ +A Y ++ A E++G+ +
Sbjct: 223 LRITAAAAYKSQRAFYEWLGLTWQAIK 249
>gi|332798404|ref|YP_004459903.1| hypothetical protein TepRe1_0394 [Tepidanaerobacter sp. Re1]
gi|332696139|gb|AEE90596.1| protein of unknown function DUF218 [Tepidanaerobacter sp. Re1]
Length = 193
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 89/222 (40%), Gaps = 35/222 (15%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++++ F+ F+LLFSF+ + + +++LG G
Sbjct: 2 LKRLLFIIVFVLLFSFLIIESL------------IIVNSFSNDDMPVDYMIILGAGLYGD 49
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P++R R+ + + Q I++SGG ++E+ L+
Sbjct: 50 EPSPSLRY--------RLQQALEYANKYPQ----VPIVVSGGQGSNEWISEAEAMQRFLV 97
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIK---NMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ G++ + I E S +T +N F+ +IK + +++V+S YH+ RS+ + +G
Sbjct: 98 KHGIKEERIIKEDCSTNTGENLLFAREVIKYTGKAERPKVMIVTSEYHMFRSKFLARRYG 157
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
C+ + PL ++EY ++ ++
Sbjct: 158 FIPYGICAPTPAYPRYLKPLYY--------IREYFAVIKSFL 191
>gi|326779511|ref|ZP_08238776.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
gi|326659844|gb|EGE44690.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
Length = 286
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 64/215 (29%), Gaps = 21/215 (9%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ L ++ R + ++ + T + +P + V+
Sbjct: 64 FALRLPRTRRVQRRLVQGVVAACVLALVP-ATWMRLEAGDRVGTTAEAPAR----EVAVV 118
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G G + P+ R+ LY++ K +++ GD + E
Sbjct: 119 FGAGLW--------KGRPTPYLAHRLDAAAELYRTGK-----VKVVLVTGDNSRVEYDEP 165
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L GV + I + D++ + + + +LVS +H+ R+
Sbjct: 166 DAMRTYLTGRGVPDERIVSDYAGFDSWDSCVRAKKIFG---VDRAVLVSQGFHIHRAVTL 222
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+ GI+ D + + A
Sbjct: 223 CRSAGIDAYGVGVDEPRDATWYYGGARELAASGKA 257
>gi|238021623|ref|ZP_04602049.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
gi|237866237|gb|EEP67279.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
Length = 213
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 76/208 (36%), Gaps = 20/208 (9%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L S + + + P P K + V+LG PS
Sbjct: 14 FLLSILSIFALQAWCAWQVYQYAHAPAALP---KHADAAVVLGAAAWGDK--------PS 62
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
RI + LY Q +I +GG ++ +E V L+ G+ DI
Sbjct: 63 PVFRERINHAIALY----QSERVEKLIFTGGTRKEGYPSEGEVARKFALKQGIPSHDIIY 118
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
ET+S DT+QN + +++ + ++I+VS YH+ R+ + GI S +
Sbjct: 119 ETRSKDTYQNLVNTRLLMQKHKLHHVIIVSDPYHMARAIAIARDLGIPATPSPT-----P 173
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYY 238
S ++ + ++E + I
Sbjct: 174 TSRYTEASEQARWKFFIEESYSLFIYRL 201
>gi|332975337|gb|EGK12233.1| hypothetical protein HMPREF9373_1599 [Psychrobacter sp. 1501(2011)]
Length = 260
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 88/252 (34%), Gaps = 44/252 (17%)
Query: 2 LLSWIFLIVSYWHLLCQSI-------RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
LL IF+ + + + RKI+ + + + L +
Sbjct: 38 LLGMIFIAHGVFWPKIKKLLGKYHYLRKIWKTLWAGFGIWLVSFLVFAFTL-------HS 90
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
+ + + I++LG G P + SR+ + L + + +
Sbjct: 91 HVRQPNEPFEKVDAIIILGGGIQDGLPTPTL--------ASRLDTAVPLIREQPEAIVIT 142
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG- 173
+ + G+ + G A + + G+ DDI E +S T +N FS ++ +
Sbjct: 143 SGGVGIGETRSEGEAMAQYLHAL---YGIPLDDIYQEKKSTSTEENFLFSQKILTDKNIS 199
Query: 174 --KNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALK 228
I +V+S +H+ RS+ +H G + T AS + Y + +
Sbjct: 200 LKDPIAIVTSDFHMPRSKAIAEHQGYTNLVTVASPTPLETRYNAWF-------------R 246
Query: 229 EYIGILIAYYRG 240
EY + + G
Sbjct: 247 EYFAYISGWILG 258
>gi|257089980|ref|ZP_05584341.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|256998792|gb|EEU85312.1| conserved hypothetical protein [Enterococcus faecalis CH188]
Length = 337
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG + E+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVTEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 302
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 303 ALIREYIALLV 313
>gi|153955310|ref|YP_001396075.1| hypothetical protein CKL_2692 [Clostridium kluyveri DSM 555]
gi|146348168|gb|EDK34704.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 196
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 77/204 (37%), Gaps = 21/204 (10%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
F+ + II LL + K + I++LG PS
Sbjct: 7 FVLYFIIVIFLLALITEIQIIYFGENAKPKKSDCIIVLGCRVYGS--------TPSPFLI 58
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ + + LY II+SGG ++E+ N L+ G++ + +E +S
Sbjct: 59 WRLNKGLELYDKGYGDY----IIVSGGKGPGENISEAKAMKNYLVYKGIDSSRVIMEDKS 114
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
+ T +N S +++ K ++VS+ YHLKR+ L + GI +Y +
Sbjct: 115 MSTMENLSNSKRVMEEKGLKTAVIVSNKYHLKRASLMAESHGIE---------GSYSGVF 165
Query: 215 PLSANFYLTELALKEYIGILIAYY 238
+ ++E + Y
Sbjct: 166 VYTYKNREITGYIREIPALWKYYL 189
>gi|197302961|ref|ZP_03168011.1| hypothetical protein RUMLAC_01688 [Ruminococcus lactaris ATCC
29176]
gi|197297956|gb|EDY32506.1| hypothetical protein RUMLAC_01688 [Ruminococcus lactaris ATCC
29176]
Length = 244
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 89/260 (34%), Gaps = 50/260 (19%)
Query: 3 LSWIFL--IVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR--- 55
+ WI L + + +L ++I FF+ L F+G L + + R
Sbjct: 6 IFWILLAVLCGGYGILIRAIGSGTGFFLVWIALAVIFVGCSAAAQAGLWGIMPQFLRRVT 65
Query: 56 -------------------PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
++ + K + I++LG +R R
Sbjct: 66 LVLLCLILVLFTGIGGCIGSKMNTEGKPGLDYIIVLGAQVYERGPSAVLRF--------R 117
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + + Q I+SGG +E+ L+ G+ + I E +S
Sbjct: 118 LDKAVEYLNENPQTKC----IVSGGKGSNEPCSEAEGMEKYLIRQGIPEERILKEEKSKT 173
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T +N Q+S IK+ +++ +V++ +H+ R+ + G+ I
Sbjct: 174 TAENIQYSKKFIKSK--ESVGIVTNNFHMFRALQIAKRQGLE----------DPSGIAAE 221
Query: 217 SANFYLTELALKEYIGILIA 236
S YL L+E + +
Sbjct: 222 STALYLPNNVLREILAEIKY 241
>gi|322807220|emb|CBZ04794.1| hypothetical protein H04402_02990 [Clostridium botulinum H04402
065]
Length = 197
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG P ++ R+ E + LY II+SG
Sbjct: 38 SQPQKSDSIIILGCKVKGNDPTPFLK--------RRLDEGLGLYNEGYGKY----IIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ L++ G+++ I LE +S +T +N +FS +++ + I+VS
Sbjct: 86 AKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVS 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHLKR++L Q GI +Y + S + L+E +L+ Y +
Sbjct: 146 NKYHLKRAELLCQKEGIKA---------SYSGVFVRSHMSHEIMGFLREIPALLVYYIK 195
>gi|187778595|ref|ZP_02995068.1| hypothetical protein CLOSPO_02190 [Clostridium sporogenes ATCC
15579]
gi|187772220|gb|EDU36022.1| hypothetical protein CLOSPO_02190 [Clostridium sporogenes ATCC
15579]
Length = 351
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 94/237 (39%), Gaps = 24/237 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + FI + I ++ + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTGIIGFITFLISYFFMMMFIFAISAAINTYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK+ + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKNQLEKGHPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-----KNIILVS 180
++E + + G+ + + +E Q+++T++N S +++ G I+V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPNEHMIIEDQAVNTYENLSNSKKLLEEDYGTREKQYRCIVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIY 321
>gi|182438855|ref|YP_001826574.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178467371|dbj|BAG21891.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 286
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 64/215 (29%), Gaps = 21/215 (9%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ L ++ R + ++ + T + +P + V+
Sbjct: 64 FALRLPRTRRVQRRLVQGVVAACVLALVP-ATWMRLEAGDRVGTTAEAPAR----EVAVV 118
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G G + P+ R+ LY++ K +++ GD + E
Sbjct: 119 FGAGLW--------KGRPTPYLAHRLDAAAELYRTGK-----VKVVLVTGDNSRVEYDEP 165
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L GV + I + D++ + + + +LVS +H+ R+
Sbjct: 166 DAMRTYLTGRGVPDERIVSDYAGFDSWDSCVRAKKIFG---VDRAVLVSQGFHIHRAVTL 222
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+ GI+ D + + A
Sbjct: 223 CRSAGIDAYGVGVDEPRDATWYYGGARELAASGKA 257
>gi|296112949|ref|YP_003626887.1| hypothetical protein MCR_0726 [Moraxella catarrhalis RH4]
gi|295920643|gb|ADG60994.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
Length = 235
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 86/223 (38%), Gaps = 20/223 (8%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++ +S++ I +L+ I L L Y L+ D IV+LG
Sbjct: 1 MVLKSLKFIAVGGTVILIGIASALTPIFANLGVGLLNLYSALTLATVQ-DDATSIVVLGG 59
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G T A I + + SR + L+K +II SG AES
Sbjct: 60 GLTKN---SAGTISLNHFTQSRANAAIHLHKLYP-----LSIITSG--------AESPWL 103
Query: 135 NNKLLESGVERDD-IKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYF 192
+ L+E I E S++T +NA F++ ++ + + LV+ YH+ R++ F
Sbjct: 104 RDYLIEHIGRTKVVIINENASMNTCENAVFTAKLLSHHELSTTVYLVTDRYHMARARRQF 163
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
GI+T + + L S N T + E + +
Sbjct: 164 AKAGIHTIPAPAP-LAIRSSWQNPKDNLIHTRRTIYELVALAR 205
>gi|329571598|gb|EGG53279.1| hypothetical protein HMPREF9520_02582 [Enterococcus faecalis
TX1467]
Length = 344
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|257416189|ref|ZP_05593183.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|257422515|ref|ZP_05599505.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|257158017|gb|EEU87977.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257164339|gb|EEU94299.1| conserved hypothetical protein [Enterococcus faecalis X98]
Length = 337
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 302
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 303 ALIREYIALLV 313
>gi|168184465|ref|ZP_02619129.1| putative membrane protein [Clostridium botulinum Bf]
gi|237796257|ref|YP_002863809.1| hypothetical protein CLJ_B3049 [Clostridium botulinum Ba4 str. 657]
gi|182672403|gb|EDT84364.1| putative membrane protein [Clostridium botulinum Bf]
gi|229263461|gb|ACQ54494.1| putative membrane protein [Clostridium botulinum Ba4 str. 657]
Length = 351
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/237 (15%), Positives = 92/237 (38%), Gaps = 24/237 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +F + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFTTFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKRQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-----KNIILVS 180
++E + + + D + +E ++++T++N S +++ I+V+
Sbjct: 216 EKISEGLAMWKYAKDKDIPTDHMIIEDKAVNTYENLYNSKKLLEEDYKARGKEYRCIIVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIY 321
>gi|58338206|ref|YP_194791.1| hypothetical protein LBA1967 [Lactobacillus acidophilus NCFM]
gi|227902607|ref|ZP_04020412.1| membrane protein [Lactobacillus acidophilus ATCC 4796]
gi|58255523|gb|AAV43760.1| putative membrane protein [Lactobacillus acidophilus NCFM]
gi|227869696|gb|EEJ77117.1| membrane protein [Lactobacillus acidophilus ATCC 4796]
Length = 350
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 89/230 (38%), Gaps = 29/230 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I L++ + +L +S +F ++ F+ I I + + L K
Sbjct: 118 IILLIFAYPVLGRSTSAPWFR----FIYLFLSMSIFYIIFIMVMYTLTSWLNLININTKK 173
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
N IV+LG G P + SRI + +Y +I+SGG
Sbjct: 174 LNYIVVLGAGLLGKKVTPLL--------ASRINRGIEIYHKNP----DSKLIMSGGQGPD 221
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ ES E GV + DI +E +S T QN +FS ++K +V+++YH+
Sbjct: 222 EEIPESHAMAAYAEEHGVPKSDIIIEDRSKTTNQNLKFSHQLMKPN--STFCIVTNSYHV 279
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
R+ + + G+ + + ++ ++E+I L+
Sbjct: 280 YRALVLAKRQGLQCIGYGA-----------KTKWYFTLNAFIREFIAYLV 318
>gi|284802880|ref|YP_003414745.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284996021|ref|YP_003417789.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
gi|284058442|gb|ADB69383.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284061488|gb|ADB72427.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
Length = 189
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 73/178 (41%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P +P++ ++ R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVKGNPAVPSLVLQ------ERLDAAVAYLNEYPK----AKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S YH+ R + + GI+ + S F + ++E + I A+
Sbjct: 140 SDYHMYRGLMLAKRQGIDASGLPA-----------TSQTFAKYKGMMREVLSITYAWV 186
>gi|170761647|ref|YP_001788140.1| hypothetical protein CLK_2209 [Clostridium botulinum A3 str. Loch
Maree]
gi|169408636|gb|ACA57047.1| putative membrane protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 351
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 93/237 (39%), Gaps = 24/237 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +FI + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILAAIIAFITFLITYFFMMMFIFAISAAINIYIPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + RI + + +YK + II +G
Sbjct: 164 YDYIIILGSGLIGDRVPPLL--------AGRIDKGIEIYKKQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-----KNIILVS 180
++E + + G+ D + +E ++++T++N S +++ I+V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPTDHMIIEDKAVNTYENLYNSRKLLEEDYKAREKEYRCIVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIY 321
>gi|255975750|ref|ZP_05426336.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|255968622|gb|EET99244.1| conserved hypothetical protein [Enterococcus faecalis T2]
Length = 337
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 302
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 303 ALIREYIALLV 313
>gi|219855730|ref|YP_002472852.1| hypothetical protein CKR_2387 [Clostridium kluyveri NBRC 12016]
gi|219569454|dbj|BAH07438.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 199
Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 77/204 (37%), Gaps = 21/204 (10%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
F+ + II LL + K + I++LG PS
Sbjct: 10 FVLYFIIVIFLLALITEIQIIYFGENAKPKKSDCIIVLGCRVYGS--------TPSPFLI 61
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ + + LY II+SGG ++E+ N L+ G++ + +E +S
Sbjct: 62 WRLNKGLELYDKGYGDY----IIVSGGKGPGENISEAKAMKNYLVYKGIDSSRVIMEDKS 117
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
+ T +N S +++ K ++VS+ YHLKR+ L + GI +Y +
Sbjct: 118 MSTMENLSNSKRVMEEKGLKTAVIVSNKYHLKRASLMAESHGIE---------GSYSGVF 168
Query: 215 PLSANFYLTELALKEYIGILIAYY 238
+ ++E + Y
Sbjct: 169 VYTYKNREITGYIREIPALWKYYL 192
>gi|86739984|ref|YP_480384.1| hypothetical protein Francci3_1277 [Frankia sp. CcI3]
gi|86566846|gb|ABD10655.1| protein of unknown function DUF218 [Frankia sp. CcI3]
Length = 245
Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 72/226 (31%), Gaps = 28/226 (12%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W+ + + ++ +L + + + + +++V+L
Sbjct: 34 WYRVPWWRWMMRAVAAVLLGIMVLAVVTFLQVWWVGRE----------DHRPRSDVLVVL 83
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G PS +R+ + LY+ + +I GG E
Sbjct: 84 GA--------SQYDGRPSAVLAARLDHVLELYREG----IAPQVITVGGKQPGDRYTEGE 131
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L + G+ D + + + +T + + ++ + +LV+ +H RS+
Sbjct: 132 ASATYLRQRGIPPDRVLVLPEGSNTLGSLTAVAGLMNSRHWHTAVLVTDPWHSLRSRTMA 191
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G++ S +D A + ++E IG
Sbjct: 192 RDLGVDAVTSPADRGPAVHGFG------TQVRYIIREGIGYRWYQL 231
>gi|255972698|ref|ZP_05423284.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|256619159|ref|ZP_05476005.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256762595|ref|ZP_05503175.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|256853221|ref|ZP_05558591.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256961832|ref|ZP_05566003.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256965029|ref|ZP_05569200.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|257086952|ref|ZP_05581313.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|255963716|gb|EET96192.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|256598686|gb|EEU17862.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256683846|gb|EEU23541.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|256711680|gb|EEU26718.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256952328|gb|EEU68960.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256955525|gb|EEU72157.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256994982|gb|EEU82284.1| conserved hypothetical protein [Enterococcus faecalis D6]
Length = 337
Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 302
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 303 ALIREYIALLV 313
>gi|168179230|ref|ZP_02613894.1| putative membrane protein [Clostridium botulinum NCTC 2916]
gi|226950231|ref|YP_002805322.1| hypothetical protein CLM_3185 [Clostridium botulinum A2 str. Kyoto]
gi|182669494|gb|EDT81470.1| putative membrane protein [Clostridium botulinum NCTC 2916]
gi|226844033|gb|ACO86699.1| putative membrane protein [Clostridium botulinum A2 str. Kyoto]
Length = 351
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/237 (15%), Positives = 92/237 (38%), Gaps = 24/237 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +F + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFTTFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKRQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-----KNIILVS 180
++E + + + D + +E ++++T++N S +++ I+V+
Sbjct: 216 EKISEGLAMWKYAKDKDIPTDHMIIEDKAVNTYENLYNSKKLLEEDYKARGKEYRCIIVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIY 321
>gi|294781623|ref|ZP_06746959.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|307269476|ref|ZP_07550815.1| hypothetical protein HMPREF9498_01609 [Enterococcus faecalis
TX4248]
gi|294451319|gb|EFG19785.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|306514096|gb|EFM82672.1| hypothetical protein HMPREF9498_01609 [Enterococcus faecalis
TX4248]
gi|323480825|gb|ADX80264.1| conserved hypothetical protein [Enterococcus faecalis 62]
Length = 344
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|169825776|ref|YP_001695934.1| hypothetical protein Bsph_0170 [Lysinibacillus sphaericus C3-41]
gi|168990264|gb|ACA37804.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 242
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 100/238 (42%), Gaps = 30/238 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M LS++ +++ Y ++ I + + F F G+ + L +Y
Sbjct: 5 MGLSFVIMMIGYVFVIFIQIENVLWHILFFYAFLIFGYT----MFLYTSVLAYAVLYHFT 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + N I+ LG+G P + SR+ E ++ K++ II+SG
Sbjct: 61 PIRYEPNYIIALGSGLIGDRVPPLL--------ASRLNEAVK---QYKKYGERPFIIVSG 109
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNI 176
G ++E+ LL+ + + + +E QS +T +N F+ +++ +
Sbjct: 110 GQGTDENVSEAKAMKKYLLDVHDIPANKVLMEDQSTNTEENMIFTKNIMDQHAQGEKYRS 169
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I V++ +H+ R+ LY + ++ + S +A +Y+ +E+IG+L
Sbjct: 170 IFVTNNFHVFRASLYAKKAKLDAEGVGS-----------KTAFYYVPNAFTREFIGLL 216
>gi|315037077|gb|EFT49009.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
Length = 344
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 309
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 310 ALIREYIALLV 320
>gi|257082455|ref|ZP_05576816.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256990485|gb|EEU77787.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
Length = 337
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 77/191 (40%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 173 GKN--------IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K +I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMSSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 302
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 303 ALIREYIALLV 313
>gi|300865454|ref|ZP_07110248.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336546|emb|CBN55398.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 267
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 24/235 (10%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
++ L++++ +L + +L+ I I +K SY+ P
Sbjct: 32 TFCLLLITFDSMLSKWFLLQGRSIFLLLIGLAILTPIGLNYYVKIFTNSYR--YNDPANI 89
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
N+ ++ G G PS R+ + LYK + I+ GD
Sbjct: 90 PPENVAIVFGAGVWAD-------GTPSPMLADRVQAAVDLYKLGRIRK-----ILMTGDN 137
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E E GV DI L+ T+++ + + Q +L++ +Y
Sbjct: 138 SSPYYNEVKAMMIYAEEKGVPNSDITLDYAGFSTYESCYRAKEIFGVKQ---AVLITQSY 194
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
HL R+ + G+ + + N + + +++E ++ A +
Sbjct: 195 HLPRAVYTCRALGVEAVGLGTPDWGKF-------RNNSMIQYSVREVFAVVKALW 242
>gi|315304604|ref|ZP_07874845.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
gi|313627033|gb|EFR95925.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
Length = 189
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 74/219 (33%), Gaps = 36/219 (16%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RKIF + + L I+ + Q + +++LG
Sbjct: 4 LRKIFIVFIVISLLYLF---IVAICMFSGTQTK---------PSDNAKTVLILGAKVIGE 51
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P +PS R+ + + +I+SGG E+ V L+
Sbjct: 52 PA------QPSHVLQERLDAAVDYLNEHPK----ARVIVSGGQGTDESETEASVMEEYLV 101
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ R I ET+S T +N S Q + ++V+S YH+ R+ + + I+
Sbjct: 102 NEGIRRARIDTETKSKRTEENISNSKE---KFQLEKTVIVTSDYHMYRALMLAKRQNIDA 158
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + ++E + I A+
Sbjct: 159 TGLPAKSKT-----------IAKYKGMMREVMSITYAWV 186
>gi|256377332|ref|YP_003100992.1| hypothetical protein Amir_3239 [Actinosynnema mirum DSM 43827]
gi|255921635|gb|ACU37146.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 336
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 83/215 (38%), Gaps = 24/215 (11%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ ++ L G+ L Y + + I++LG G P
Sbjct: 123 WVLAAAGSLVLLAGYLGFAFTLFLL----YSVLYGRVRKRTGHTAIIVLGAGVPGGRVTP 178
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ R+ ++LY+ ++ SGG +E+ V N L E G+
Sbjct: 179 LL--------AGRLDRALKLYRRAAAKGASPVVVASGGQGPDEPASEAEVMANYLRERGI 230
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL-VSSAYHLKRSQLYFQHFGINTKAS 202
+ + E +S T++N + SS+++ +L V+S+YH+ R+ + + G+
Sbjct: 231 PDEALLEERESTSTWENLRLSSALLAERGVTGRLLVVTSSYHVPRAAILSRRAGLK---- 286
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+D + +++ L+E+ +L+ Y
Sbjct: 287 -ADVRGGRTAW------YFVPNAFLREFAALLVQY 314
>gi|160894200|ref|ZP_02074978.1| hypothetical protein CLOL250_01754 [Clostridium sp. L2-50]
gi|156864233|gb|EDO57664.1| hypothetical protein CLOL250_01754 [Clostridium sp. L2-50]
Length = 255
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 90/248 (36%), Gaps = 42/248 (16%)
Query: 1 MLLSWIFLIVSYWH---------LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQF 51
++L ++ + W L ++ K+ +++ +G+ TI +
Sbjct: 39 VVLGICLILYAAWFHRVNCRVKKWLTRTTGKVICGIVLLIVLVAVGFAAAGTICM----- 93
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
S KD ++++LG G PS R+
Sbjct: 94 ----VRASKTAPKDETVMIVLGCGVNGD--------RPSLMLTERLDAAYD----YLNTH 137
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN- 170
I+SGG + ++E+ L E G+ ++ + E +S T +N +S +++
Sbjct: 138 EEVVGILSGGQGKGENISEAECMYRYLTEKGIAKERLYKEERSTSTRENLLYSKKIMEEE 197
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+I+V++ +H R+ + +H GI S A++ L L+E
Sbjct: 198 HLDFRVIIVTNEFHEYRASVIAEHTGI--TPSAVCGKTAWW---------LLPTYYLREL 246
Query: 231 IGILIAYY 238
GI+ +
Sbjct: 247 YGIVFEWI 254
>gi|134099149|ref|YP_001104810.1| hypothetical protein SACE_2594 [Saccharopolyspora erythraea NRRL
2338]
gi|291009369|ref|ZP_06567342.1| hypothetical protein SeryN2_33020 [Saccharopolyspora erythraea NRRL
2338]
gi|133911772|emb|CAM01885.1| putative membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 331
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 92/234 (39%), Gaps = 28/234 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ I LI R + + + +++ + +L Y +
Sbjct: 101 VGIIALIALRALANSTRWRPLQVAMDAVGSVLAYVSLLFVCFLL-------YAFVYGMLR 153
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++D + +V+LG+G P + SR+ ++++ + +++SGG
Sbjct: 154 HRRDVDFVVVLGSGLIGSRVPPLL--------ASRLDRGREVFETAQAKGRDPMLVVSGG 205
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVS 180
+ E+ + L GV D I +E QS T +N +FS ++++ + ++V+
Sbjct: 206 QGPGEDVPEARAMADYLGSRGVPEDRILIEDQSRSTEENLRFSKAIMQERRSDYRCLVVT 265
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ +H+ R+ + +N + S +A ++ ++E+I I
Sbjct: 266 NNFHVMRAARTARSEKVNGQVIGS-----------RTARYFWPSAIIREFIAIF 308
>gi|257419391|ref|ZP_05596385.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|257161219|gb|EEU91179.1| conserved hypothetical protein [Enterococcus faecalis T11]
Length = 337
Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGKGPDEPVAEAFAMKKYLLSQNIPAEAILMEGQSTTTYENMLFSKAIIQADW 253
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 302
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 303 ALIREYIALLV 313
>gi|225386502|ref|ZP_03756266.1| hypothetical protein CLOSTASPAR_00249 [Clostridium asparagiforme
DSM 15981]
gi|225047421|gb|EEG57667.1| hypothetical protein CLOSTASPAR_00249 [Clostridium asparagiforme
DSM 15981]
Length = 253
Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 70/229 (30%), Gaps = 30/229 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + L + ++ +++ ++ + I
Sbjct: 27 MKFLKWLRKPMKWAIYLAVAGCCLVVGINLY-----MQGTVKKRIVTPEQAAELDKVDCI 81
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG G PS R+ + + LY + ++ GD +
Sbjct: 82 LVLGCGVRDD-------GSPSGMLNDRLLQGIALYNAGVSDR-----LLMSGDHGRVDYD 129
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + ++ GV +DI ++ T+++ + + + + +V+ YH+ R+
Sbjct: 130 EVNLMKQFAIDHGVPSEDIFMDHAGFSTYESMYRARDIFQAERIV---VVTQEYHMYRAL 186
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G++ SD P A +E + +
Sbjct: 187 YNAGQMGMDAYGVASD---------PRKYGGQKIRDA-REMLARTKDFL 225
>gi|169342569|ref|ZP_02863622.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|169299341|gb|EDS81408.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
Length = 206
Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 25/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
KD ++LG G PS R+ E + + + +I+
Sbjct: 37 DINQLKDVEYEIILGAGLYGDK--------PSPILQERLEEGL----KYLELHPNTKVIV 84
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII- 177
SGG + ES N L+ G+ + I E +S TFQN +FS +++
Sbjct: 85 SGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHADKDEV 144
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V+S +HL R++ + I + S + + ++E+ ++
Sbjct: 145 LIVTSDFHLFRAKEIADYLNIKNEGLPSKTPISL-----------RVQYMIREFPAMIKL 193
Query: 237 YY 238
Sbjct: 194 LL 195
>gi|148652828|ref|YP_001279921.1| hypothetical protein PsycPRwf_1021 [Psychrobacter sp. PRwf-1]
gi|148571912|gb|ABQ93971.1| protein of unknown function DUF218 [Psychrobacter sp. PRwf-1]
Length = 267
Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 88/249 (35%), Gaps = 38/249 (15%)
Query: 2 LLSWIFLI-VSYWHLLC------QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
+L IF+I +WH + + R ++ + + + I + + L ++
Sbjct: 45 VLGLIFIIHAVFWHKIKAKLQVSKHWRMVWKLLWAIFVLWLISFIVFAFSL-------HK 97
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
Q + I++LG G P + SR+ L K Q +
Sbjct: 98 NIKQVDQPYETVAAIIVLGGGIQDGLPTPTL--------ASRLDAAAPLIKEQPQAVVIT 149
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG- 173
+ I G+ + G A + G+ + I+ E S T +N FS ++
Sbjct: 150 SGGIGMGEIRSEGEAMARYLYAL---YGIPLEHIQQEKNSTSTEENFLFSQQILTEQGIS 206
Query: 174 --KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
I +V+S +H+ RS +H G L A S PLS + +EY
Sbjct: 207 LNDPIAVVTSDFHIPRSLAIAEHQGYT-------NLVALASTTPLSIRYNSW---FREYF 256
Query: 232 GILIAYYRG 240
+ + G
Sbjct: 257 AYISGWLLG 265
>gi|290893441|ref|ZP_06556425.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556942|gb|EFD90472.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 344
Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 99/240 (41%), Gaps = 26/240 (10%)
Query: 2 LLSWIFLIVSY--WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L + +I+ + W + + +F+G+ + F YQ
Sbjct: 101 LFIGLVIIILFIAWFGSILKNGSPILGVVVLFVMAFVGYFSFLFLSFLLSTFLYQFNF-- 158
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
+ + + +++LG+G +P + SR+ + Y K + T I+
Sbjct: 159 --PRYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIAFYEKQYSKTGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG ++E+ + L+ G++ I +E QS++T QN QFS + + + L
Sbjct: 210 SGGQGANETVSEAQAMRDYLISKGIDETFIIMEDQSVNTLQNMQFSKAKMDAIMPDYNSL 269
Query: 179 V-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGLYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 318
>gi|260578222|ref|ZP_05846141.1| secreted protein [Corynebacterium jeikeium ATCC 43734]
gi|258603678|gb|EEW16936.1| secreted protein [Corynebacterium jeikeium ATCC 43734]
Length = 213
Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 19/177 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + I +LG PS SR+ LYK TI+ G
Sbjct: 48 DDRRPADTIFVLGAA--------QYAGSPSNWFASRLNHAAELYKQGVA----PTIVTVG 95
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + E+ L+E + + + DT ++A+ + + + ++V
Sbjct: 96 GKAEGDQYTEAAAGKKYLVENFDIPDSAVVPVEEGADTLKSAEAFAQVASENGWRTSVVV 155
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ H R+ + G++ AS + + ++ + L E +G+L
Sbjct: 156 TDPEHSLRATRMVRDQGLDAWASPTRQGPSVFTRKSQA------NSILHETLGMLYY 206
>gi|154482903|ref|ZP_02025351.1| hypothetical protein EUBVEN_00600 [Eubacterium ventriosum ATCC
27560]
gi|149736187|gb|EDM52073.1| hypothetical protein EUBVEN_00600 [Eubacterium ventriosum ATCC
27560]
Length = 224
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 62/175 (35%), Gaps = 24/175 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG G +PS+ RI +LY ++ GD
Sbjct: 49 NADCIIVLGAGVKPS-------GKPSWMLEDRIIVGEQLYNVNAAPK-----LLMSGDHG 96
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E N + G+ +DI ++ +T+ + + + + +VS YH
Sbjct: 97 RENYDEVNTMKNYAINDGIPSEDIFMDHAGFETYDSMYRAKKIFGAKKVV---IVSQKYH 153
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L RS + G++ SD + +E++ + ++ +
Sbjct: 154 LYRSLYIAKKMGLDAYGVSSDLR-----YYSKKQYYREA----REWLARVKSFIK 199
>gi|311899501|dbj|BAJ31909.1| hypothetical protein KSE_61430 [Kitasatospora setae KM-6054]
Length = 330
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 76/188 (40%), Gaps = 20/188 (10%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y ++D + +V+LG G +P + SR+ RLY+
Sbjct: 145 YAYLYGRLIPREDVDYVVVLGAGLLDGSRVPPL-------LASRLDRGRRLYERQVDRGR 197
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNM 171
+++SGG L E+ L+E G D I E +S T +N +FS +++
Sbjct: 198 SPLLLVSGGKGGDEQLPEADAMAGYLVERGFPADRIVREDRSATTEENLRFSHAIMAAAD 257
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
++V++ +H R+ ++ + G+ S +A ++ ++E++
Sbjct: 258 PDYRCVVVTNNFHAFRAAVFARREGVRGHVVGS-----------PTAAYFWPSATIREFV 306
Query: 232 GIL-IAYY 238
++ + +
Sbjct: 307 ALIVVYRW 314
>gi|257055414|ref|YP_003133246.1| hypothetical protein Svir_13720 [Saccharomonospora viridis DSM
43017]
gi|256585286|gb|ACU96419.1| uncharacterized conserved protein [Saccharomonospora viridis DSM
43017]
Length = 210
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 65/178 (36%), Gaps = 18/178 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG PS +R+ +LY+ I+ +G
Sbjct: 38 DERPRVDAIVVLGAA--------QYNGRPSEIFQARLDHARQLYEEGVADV----IVTTG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ N L+ GV + + DT ++ + ++ +++ +++LVS
Sbjct: 86 GMRDGDAYTEAEAGANWLVSQGVPVEATLPVGEGSDTLRSLRAAAVVLRERDWNDVVLVS 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H R+++ + G++ S + + + L+E +L
Sbjct: 146 DPWHSLRAKIMAEDAGLSVWTSPTHSGPIVQTRSTQARY------ILRETAALLYYRL 197
>gi|110800413|ref|YP_695257.1| hypothetical protein CPF_0806 [Clostridium perfringens ATCC 13124]
gi|110675060|gb|ABG84047.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 206
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 25/179 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ KD ++LG G PS R+ E + + + +I+
Sbjct: 37 DIKQLKDVEYEIILGAGLYGDK--------PSPILQERLEEGL----KYLELHPNTKVIV 84
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII- 177
SGG + ES N L+ G+ + I E +S TFQN +FS +++
Sbjct: 85 SGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHADKDEV 144
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+V+S +HL R++ + I + S + + ++E+ ++
Sbjct: 145 LIVTSDFHLFRAKEIADYLNIKNEGLPSKTPISL-----------RVQYMIREFPAMIK 192
>gi|329935832|ref|ZP_08285635.1| hypothetical protein SGM_1127 [Streptomyces griseoaurantiacus M045]
gi|329304675|gb|EGG48550.1| hypothetical protein SGM_1127 [Streptomyces griseoaurantiacus M045]
Length = 336
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 87/220 (39%), Gaps = 27/220 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ + G+ I + L L Y + ++ + +V+LG+G T+P
Sbjct: 121 LVVVAATAMALAGY--IAFLFLCFL--VYGAMYGRLRIRRRADYVVVLGSGLIGGTTVPP 176
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ R+ + + + ++ SGG + ES + L+ G
Sbjct: 177 L-------LAGRLDRARKEHARLSRKGRRPVMLTSGGQGPDEKVPESHAMADYLVAQGFP 229
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVSSAYHLKRSQLYFQHFGIN--TKA 201
D I+ E +S T +N FS ++++ ++V++ YH+ R+ + + G+
Sbjct: 230 ADLIEREDRSTTTDENLTFSKALMERANPDYRCVIVTNNYHVFRAAVTARRTGVRGHVIG 289
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + A ++ ++E++ +L+AY R N
Sbjct: 290 APT-------------AAYFWPSAMIREFVALLVAYRRTN 316
>gi|121534257|ref|ZP_01666081.1| protein of unknown function DUF218 [Thermosinus carboxydivorans
Nor1]
gi|121307027|gb|EAX47945.1| protein of unknown function DUF218 [Thermosinus carboxydivorans
Nor1]
Length = 192
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ G++I++LG I EPS R+ E +LY++ II+SG
Sbjct: 33 AKPEPGDVIIVLGA--------KLIGHEPSTMLRLRLDEAAKLYQAGYAPF----IIVSG 80
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ N L+ GV D I LE +S +T QN S ++++ + I+VS
Sbjct: 81 AQGCDEVISEAAAMRNYLIAHGVPADRILLEDKSFNTQQNLANSLAIMREHGLQRAIIVS 140
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL-ALKEYIGILI 235
+A H++R+ + + G+ + + P++ N YLT ++E +L
Sbjct: 141 NASHIRRALVIAHNLGMEASGAPA----------PMANNAYLTTKQYVREGAAMLA 186
>gi|300933213|ref|ZP_07148469.1| putative secreted protein [Corynebacterium resistens DSM 45100]
Length = 229
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 68/225 (30%), Gaps = 28/225 (12%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
R I + LL + T + ++ +II +LG
Sbjct: 17 AFFGGIARTITYFIFGTLLVIALITATTATHVWSFA---------RADDRQQADIIFVLG 67
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS +R+ LYK I+ G E+
Sbjct: 68 AAQYNGK--------PSKWLAARLDHAAELYKEGVA----PKIVTVGYKKDGDKFTEAEA 115
Query: 134 YNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
N L+ + GV D+ +DT +A+ S ++ ++V+ H R+
Sbjct: 116 GKNYLVSDYGVPESDVIALGTGVDTISSAEALHSEAQSRGWSTAVVVTDPGHSLRATTMV 175
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
Q G++ S + + S+ L E +G++
Sbjct: 176 QDQGLDAWGSPTRSGPSV------SSRAAQVSSILHETLGLMYYK 214
>gi|217964896|ref|YP_002350574.1| integral membrane protein [Listeria monocytogenes HCC23]
gi|217334166|gb|ACK39960.1| integral membrane protein [Listeria monocytogenes HCC23]
gi|307570545|emb|CAR83724.1| membrane protein, putative [Listeria monocytogenes L99]
Length = 344
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 99/240 (41%), Gaps = 26/240 (10%)
Query: 2 LLSWIFLIVSY--WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L + +I+ + W + + +F+G+ + F YQ
Sbjct: 101 LFIGLVIIILFIAWFGSILKNGSPILGVVVLFVMAFVGYFSFLFLSFLLSTFLYQFNF-- 158
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
+ + + +++LG+G +P + SR+ + Y K + T I+
Sbjct: 159 --PRYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIAFYEKQYSKTGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG ++E+ + L+ G++ I +E QS++T QN QFS + + + L
Sbjct: 210 SGGQGANETVSEAQAMRDYLISKGIDETFIIMEDQSVNTLQNMQFSKAKMDAIMPDYNSL 269
Query: 179 V-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGLYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 318
>gi|83589867|ref|YP_429876.1| hypothetical protein Moth_1019 [Moorella thermoacetica ATCC 39073]
gi|83572781|gb|ABC19333.1| Protein of unknown function DUF218 [Moorella thermoacetica ATCC
39073]
Length = 461
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 29/209 (13%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
++F+ + I+ + Y K ++I++LG
Sbjct: 5 ISIAIIFAALITLILGSTYW------YIEWFGWNTAPKRADVIIVLGAAVWANG------ 52
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS RI LY+ T+I +GG + + E L+ G+ +
Sbjct: 53 --PSPALMERITLAETLYQQ----VYAATLITTGGIGRSNPTPEGSAARQVLISHGIPAN 106
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I E S +T +N + ++++ K+ ++V+ +HL R+ + GI +
Sbjct: 107 VIYEEVTSSNTRENLVGALNIMRKHGWKSAVIVTHDFHLLRAMTEARRLGIEVSGAGV-- 164
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
+ L L+E I L+
Sbjct: 165 ---------HETAMFRPPLVLREVIANLV 184
>gi|229035448|ref|ZP_04189344.1| hypothetical protein bcere0028_54330 [Bacillus cereus AH1271]
gi|228727867|gb|EEL78947.1| hypothetical protein bcere0028_54330 [Bacillus cereus AH1271]
Length = 176
Score = 79.1 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG+G P + SRI + + Y + + I SGG ++E
Sbjct: 1 MLGSGLIGDRVPPLL--------ASRINKGIEFYHRQAEVTSPPIFIFSGGQGADELVSE 52
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRS 188
+ +E G+ + + E QS++T+QN FS ++ +++G ++ +HL R+
Sbjct: 53 AHAMQAYAVEKGIPIEHTRKEDQSVNTYQNMLFSKRIMDSLKGATYNSIFTTNNFHLFRA 112
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
L+ + G+N++ S +A +Y ++EYI +++ Y
Sbjct: 113 GLFAKQSGLNSQGIGS-----------KTAFYYWPNAMIREYIAVVVMY 150
>gi|322507673|gb|ADX03127.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
Length = 376
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 18/188 (9%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
P+ + IV+LG G T+ I + + R+ +T+ + + H
Sbjct: 198 NPLPAQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEV-----EKKNH 250
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I++SG E+ L GV+ LE +S++T +N +FSS +++ G
Sbjct: 251 LPIVLSG--------VEAPYMQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLLQKKGG 300
Query: 174 -KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++LV+ YH+ R++ F GI T + P + N+ + A E +
Sbjct: 301 APTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRANYELLA 360
Query: 233 ILIAYYRG 240
+ G
Sbjct: 361 TIRDMLFG 368
>gi|184158561|ref|YP_001846900.1| hypothetical protein ACICU_02241 [Acinetobacter baumannii ACICU]
gi|239501574|ref|ZP_04660884.1| hypothetical protein AbauAB_04621 [Acinetobacter baumannii AB900]
gi|332875330|ref|ZP_08443159.1| hypothetical protein HMPREF0022_02794 [Acinetobacter baumannii
6014059]
gi|183210155|gb|ACC57553.1| hypothetical protein ACICU_02241 [Acinetobacter baumannii ACICU]
gi|323518483|gb|ADX92864.1| hypothetical protein ABTW07_2440 [Acinetobacter baumannii
TCDC-AB0715]
gi|332736434|gb|EGJ67432.1| hypothetical protein HMPREF0022_02794 [Acinetobacter baumannii
6014059]
Length = 376
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 18/188 (9%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
P+ + IV+LG G T+ I + + R+ +T+ + + H
Sbjct: 198 NPLPAQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEV-----EKKNH 250
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I++SG E+ L GV+ LE +S++T +N +FSS +++ G
Sbjct: 251 LPIVLSG--------VEAPYMQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLLQKKGG 300
Query: 174 -KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++LV+ YH+ R++ F GI T + P + N+ + A E +
Sbjct: 301 APTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRANYELLA 360
Query: 233 ILIAYYRG 240
+ G
Sbjct: 361 TIRDMLFG 368
>gi|169633752|ref|YP_001707488.1| hypothetical protein ABSDF2200 [Acinetobacter baumannii SDF]
gi|169152544|emb|CAP01524.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 376
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 18/188 (9%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
P+ + IV+LG G T+ I + + R+ +T+ + + H
Sbjct: 198 NPLPAQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEV-----EKKNH 250
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I++SG E+ L GV+ LE +S++T +N +FSS +++ G
Sbjct: 251 LPIVLSG--------VEAPYMQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLLQKKGG 300
Query: 174 -KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++LV+ YH+ R++ F GI T + P + N+ + A E +
Sbjct: 301 APTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRANYELLA 360
Query: 233 ILIAYYRG 240
+ G
Sbjct: 361 TIRDMLFG 368
>gi|169795635|ref|YP_001713428.1| hypothetical protein ABAYE1527 [Acinetobacter baumannii AYE]
gi|213158421|ref|YP_002319719.1| hypothetical protein AB57_2370 [Acinetobacter baumannii AB0057]
gi|215483123|ref|YP_002325330.1| hypothetical protein ABBFA_001427 [Acinetobacter baumannii
AB307-0294]
gi|301346826|ref|ZP_07227567.1| hypothetical protein AbauAB0_11281 [Acinetobacter baumannii AB056]
gi|301510634|ref|ZP_07235871.1| hypothetical protein AbauAB05_03624 [Acinetobacter baumannii AB058]
gi|301594655|ref|ZP_07239663.1| hypothetical protein AbauAB059_02560 [Acinetobacter baumannii
AB059]
gi|332850908|ref|ZP_08433061.1| hypothetical protein HMPREF0021_00632 [Acinetobacter baumannii
6013150]
gi|332871353|ref|ZP_08439897.1| hypothetical protein HMPREF0020_03552 [Acinetobacter baumannii
6013113]
gi|169148562|emb|CAM86428.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|213057581|gb|ACJ42483.1| hypothetical protein AB57_2370 [Acinetobacter baumannii AB0057]
gi|213988727|gb|ACJ59026.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332730343|gb|EGJ61665.1| hypothetical protein HMPREF0021_00632 [Acinetobacter baumannii
6013150]
gi|332731543|gb|EGJ62830.1| hypothetical protein HMPREF0020_03552 [Acinetobacter baumannii
6013113]
Length = 374
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 18/188 (9%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
P+ + IV+LG G T+ I + + R+ +T+ + + H
Sbjct: 196 NPLPAQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEV-----EKKNH 248
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I++SG E+ L GV+ LE +S++T +N +FSS +++ G
Sbjct: 249 LPIVLSG--------VEAPYMQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLLQKKGG 298
Query: 174 -KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++LV+ YH+ R++ F GI T + P + N+ + A E +
Sbjct: 299 APTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRANYELLA 358
Query: 233 ILIAYYRG 240
+ G
Sbjct: 359 TIRDMLFG 366
>gi|293609314|ref|ZP_06691616.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827766|gb|EFF86129.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 374
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 18/188 (9%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ P+ + IV+LG G T+ I + + R+ +T+ + K H
Sbjct: 196 NPLPVQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNGYTRLRLEKTLEVEKQN-----H 248
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I++SG E+ L E GV+ LE +S++T +N +FSS +++ G
Sbjct: 249 LPIVLSG--------VEAPYMQAWLKERGVDAK--LLEKRSMNTCENTRFSSLLLQKKGG 298
Query: 174 -KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++LV+ YH+ R++ F GI T + P N+ + A E +
Sbjct: 299 APTVMLVTDEYHMPRTRRLFALNGIETIPVVAPMPTPLTRWQPSVQNYDHSRRANYELLA 358
Query: 233 ILIAYYRG 240
+ G
Sbjct: 359 TIRDMLFG 366
>gi|257085087|ref|ZP_05579448.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256993117|gb|EEU80419.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 337
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 302
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 303 ALIREYIALLV 313
>gi|158313956|ref|YP_001506464.1| hypothetical protein Franean1_2122 [Frankia sp. EAN1pec]
gi|158109361|gb|ABW11558.1| protein of unknown function DUF218 [Frankia sp. EAN1pec]
Length = 228
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 72/226 (31%), Gaps = 28/226 (12%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + ++ + + + + ++ + +++L
Sbjct: 17 WFRVPWWRWAARIVAIIVGIVLLGSVMTFGQVWW----------VGRGDDRRASDALIVL 66
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G PS +R+ + LY+S +I GG+ E+
Sbjct: 67 GA--------SQYDGRPSAILAARLDHALELYRSGVA----PRVITVGGNQPGDRFTEAE 114
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L + GV + + Q +DT + + ++ + Q ++ ++V+ +H RS+
Sbjct: 115 AAGSYLRDRGVPSSAVLVVPQGVDTLSSLTAVAGLMDSRQWRSAVVVTDRWHSLRSRAIA 174
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G++ S + A L+E IG
Sbjct: 175 DDLGVDAVTSPATSGPANRGFGTQMRY------ILREGIGYRFYQL 214
>gi|313632066|gb|EFR99164.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
Length = 189
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 72/178 (40%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P P++ ++ R+ + + + ++++SG
Sbjct: 33 KPAENADTVLILGAKVNGNPASPSLVLQ------ERLDAAVVYLNNHPK----VSVVVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ V L+ G+ R+ I+ ET+S T +N S+ + ++V+
Sbjct: 83 GKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEENISNSNEKFE---LGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S YH+ R+ + + I+ ++ + +E + I A+
Sbjct: 140 SDYHMYRALMLAERQNIDVSGLPAESKT-----------MAKYKGMARELLSITYAWV 186
>gi|256959075|ref|ZP_05563246.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|257079106|ref|ZP_05573467.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256949571|gb|EEU66203.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256987136|gb|EEU74438.1| conserved hypothetical protein [Enterococcus faecalis JH1]
Length = 337
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y+
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYYEKNP---- 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 173 GKNI--------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA-----------PTALYFLPT 302
Query: 225 LALKEYIGILI 235
++EYI +L+
Sbjct: 303 ALIREYIALLV 313
>gi|317056415|ref|YP_004104882.1| hypothetical protein Rumal_1750 [Ruminococcus albus 7]
gi|315448684|gb|ADU22248.1| protein of unknown function DUF218 [Ruminococcus albus 7]
Length = 252
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 90/228 (39%), Gaps = 32/228 (14%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ S + ++LF +G+ + + K Q P K+ ++I++LG
Sbjct: 55 ILWSHAWGKGIITAVILFLIVGFTYVGILSAKMYQAQENEP-------KETDLIIVLGCK 107
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS R+ + +++SGG ++E+
Sbjct: 108 VKGE--------RPSRMLRRRLDAAYEAMQKHP----DALVVLSGGKGSDEKISEAEGMR 155
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSSAYHLKRSQLYFQH 194
L+E G + + +E +S +TF+N +FS ++ + G++I +V+ +H R+ L +
Sbjct: 156 RYLVEKGADESRLIMEDKSTNTFENIKFSFAITDKLGCGRDITIVTDGFHQYRASLIAKQ 215
Query: 195 FGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
G N A ++ Y+ ++E++G+ + GN
Sbjct: 216 EGAKNVTAYSANTQPK-----------YVPTYWVREWLGLTHFFVFGN 252
>gi|226307188|ref|YP_002767148.1| hypothetical protein RER_37010 [Rhodococcus erythropolis PR4]
gi|226186305|dbj|BAH34409.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 229
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 30/229 (13%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ L + R++ + M + G + + + + + IV
Sbjct: 19 GFGAGLARWTRRLIAGAVLMAVVLVGGT---AFRVWQ---------VARIDDTRPADAIV 66
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG PS +R+ + +LYK II GG + E
Sbjct: 67 VLGAA--------QYSGTPSSVFEARLEQAYKLYKRGVAPQ----IITVGGKQEGDEYTE 114
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L + G+ I DT + S+ + + + +LVS +H R++
Sbjct: 115 AASGKMYLTDRGIPSSAITAVETGSDTLLSIDAVSAEMSSQGINSAVLVSDPWHSLRTRT 174
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ G+ + + A ++ +E +L
Sbjct: 175 MARDTGLQAWTAPTRQGPAVFTRESQLHGIA------RETGALLWYQLT 217
>gi|325122581|gb|ADY82104.1| hypothetical protein BDGL_001518 [Acinetobacter calcoaceticus
PHEA-2]
Length = 374
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 18/187 (9%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
+ P+ + IV+LG G T+ I + + R+ +T+ + K H
Sbjct: 197 PLPVQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNGYTRLRLEKTLEVEKQN-----HL 249
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG- 173
I++SG E+ L E GV+ LE +S++T +N +FSS +++ G
Sbjct: 250 PIVLSG--------VEAPYMQAWLKERGVDAK--LLEKRSMNTCENTRFSSLLLQKKGGA 299
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
++LV+ YH+ R++ F GI T + P N+ + A E +
Sbjct: 300 PTVMLVTDEYHMPRTRRLFALNGIETIPVVAPMPTPLTRWQPSGQNYDHSRRANYELLAT 359
Query: 234 LIAYYRG 240
+ G
Sbjct: 360 IRDMLFG 366
>gi|312864360|ref|ZP_07724593.1| putative membrane protein [Streptococcus downei F0415]
gi|311100081|gb|EFQ58292.1| putative membrane protein [Streptococcus downei F0415]
Length = 338
Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
S L S + +I ILL L +K+ + +++LG+G P +
Sbjct: 128 SLVTGLLSLVTTMVIYLILLISAYTISSFLNLIHWFKRPIDYVLVLGSGLMGDKVTPLL- 186
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
SRI + + +Y+ C +I+SGG + +AE L GV
Sbjct: 187 -------ASRIKKGIEIYQKHP----DCRLILSGGQGKDELIAEGQAMAKYALSQGVPEK 235
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
DI +E +S +T +N QFSS ++ N N+ +V++ YHL R+ L + GI +
Sbjct: 236 DIIIEDRSKNTRENLQFSSHLMANK--ANLAIVTNYYHLFRALLIARDLGIPCIGYGA-- 291
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++ ++E+IG L R
Sbjct: 292 ---------KTKFYFSLNAYIREFIGYLYFKCR 315
>gi|167746537|ref|ZP_02418664.1| hypothetical protein ANACAC_01247 [Anaerostipes caccae DSM 14662]
gi|317471356|ref|ZP_07930711.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|167653497|gb|EDR97626.1| hypothetical protein ANACAC_01247 [Anaerostipes caccae DSM 14662]
gi|316901162|gb|EFV23121.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 228
Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 60/194 (30%), Gaps = 22/194 (11%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILL-----KHLQFSYQRPLLSPQWKKDGNIIVL 71
+ + +L+F+ I + K ++ R L Q K + +V+
Sbjct: 4 KRKRWSRWLKLLLILIFAGILTAGGINWFMIHQSKKDIET--ARQLALEQKGKKADAVVV 61
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG R+ ++ YK II GD G E
Sbjct: 62 LGAKVRKD-------GSMCLMLKERVDLGIQAYKQGLADR-----IIMSGDHGAEGYDEV 109
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
++ G+ + I + T++ + + K +V+ YHL R+
Sbjct: 110 STMKAYAIKQGIPSEHIFKDHAGFSTYETMYRARDVFKAKSIV---VVTQKYHLYRAVYD 166
Query: 192 FQHFGINTKASCSD 205
+ G+ K D
Sbjct: 167 AKALGLEVKGISCD 180
>gi|90421278|ref|ZP_01229163.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334463|gb|EAS48266.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 211
Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 5/169 (2%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
++ N I++LG E + + R+ M L + +
Sbjct: 41 SRPSVIRAVVLDRRARNGIIVLGGAFDTRVARTRGMNELN-DAADRVTAGMELAQRYPKA 99
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ + ++ + E+ G+ D + L+ ++ DTF+NA F+ + +
Sbjct: 100 KLLFSGGVAALLEEDIPETEAAEA--LYRGLGLAPDRLLLDGRARDTFENAVFAKELAQP 157
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA--YYSIIPLS 217
G+ +LV+SA H+ R+ F+ G + DY P S
Sbjct: 158 KPGEVWVLVTSASHMPRAVGCFRVAGFDIVPYPVDYRTPSGPALWRPSS 206
>gi|326792615|ref|YP_004310436.1| hypothetical protein Clole_3554 [Clostridium lentocellum DSM 5427]
gi|326543379|gb|ADZ85238.1| protein of unknown function DUF218 [Clostridium lentocellum DSM
5427]
Length = 233
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 72/211 (34%), Gaps = 26/211 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ F+F+ +I ++ +Y + D +I++LG
Sbjct: 15 VFIIGLGFFTFLASLLINLYMINTA-NTYIYSSPNDTPLLDSGVIIVLGAQVHSN----- 68
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
PS R+ +YK+ Q I+ GD + E + L+ G+
Sbjct: 69 --GNPSGILKDRLDTAYAIYKNNSQLK-----ILVSGDHGQKNYDEVNAMKDYLISLGIP 121
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I L+ T++ + + + + I+V+ YHLKR+ GI +
Sbjct: 122 TKQIYLDHAGFSTYETMYRAKEIFEVNK---AIIVTQDYHLKRAVYLANGRGIEAYGVKA 178
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILI 235
D L+ P F +EY+ +
Sbjct: 179 DILS-----YPNIKYFEA-----REYLARVK 199
>gi|256392318|ref|YP_003113882.1| hypothetical protein Caci_3132 [Catenulispora acidiphila DSM 44928]
gi|256358544|gb|ACU72041.1| protein of unknown function DUF218 [Catenulispora acidiphila DSM
44928]
Length = 236
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 26/188 (13%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII-VLLGNG 75
+S R+++ + ++ F + +Y P + ++ G G
Sbjct: 14 RKSQRRLYQAAALAVVLMFAPVTAV---------HAYASPYQRSAAAVPYEPVAIVFGAG 64
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
A PS R+ + LY+ K T+I+ GD + E
Sbjct: 65 --------APGGRPSPYLSRRLDVALDLYRRGK-----VTVILVTGDNSQPDYDEPSAMR 111
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L+E GV I + DT+ + + + + + LV+ +HL R+ L +
Sbjct: 112 QYLVERGVPAARIVRDFAGFDTWASCERAKKIFG---VDHATLVTQDFHLPRALLLCRAA 168
Query: 196 GINTKASC 203
GI+
Sbjct: 169 GIDAYGVA 176
>gi|168216315|ref|ZP_02641940.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182625617|ref|ZP_02953387.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177909169|gb|EDT71640.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|182381802|gb|EDT79281.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 206
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 25/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
KD ++LG G PS R+ E + + + +I+
Sbjct: 37 DINQLKDVEYEIILGAGLYGDK--------PSPILQERLEEGL----KYLELHPNTKVIV 84
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII- 177
SGG + ES N L+ G+ + I E +S TFQN +FS +++
Sbjct: 85 SGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHADKDEV 144
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V+S +HL R++ + I + S + + ++E+ ++
Sbjct: 145 LIVTSDFHLFRAKEIADYLNIKNEGLPSKTPISL-----------RVQYMVREFPAMIKL 193
Query: 237 YY 238
Sbjct: 194 LL 195
>gi|187933235|ref|YP_001885962.1| hypothetical protein CLL_A1769 [Clostridium botulinum B str. Eklund
17B]
gi|187721388|gb|ACD22609.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
17B]
Length = 253
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 29/224 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFM----LLFSFIGWGIIPTILLKHLQFSYQRP 56
+ + + +I+ +H + Q +FF CF+ ++ FI GI+ I +
Sbjct: 32 LPIFILGIILVLYHFIKQK---LFFNRCFIKINKIIKFFICIGIVLFIAV-----EIVII 83
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
K++ + IV+LG G + S+ SR+ ++ + + I
Sbjct: 84 SCPKSNKENTDYIVVLGAGLNNGD-------QLSYILKSRLDSALQCINE---FNNNSYI 133
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM----- 171
++SGG ++E++ LLE G+ D+I +E +S +TF+N ++S +I+
Sbjct: 134 VVSGGKGNDERISEAMAMKKYLLEQGISEDEILMEDKSKNTFENFKYSKKIIEEHSNKNI 193
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
++ +V++ +H RS++ + G N ++ Y +IP
Sbjct: 194 DDLSVKIVTTDFHGFRSKMLAKRNGYNEVKLYTN--KTIYYLIP 235
>gi|284990206|ref|YP_003408760.1| hypothetical protein Gobs_1673 [Geodermatophilus obscurus DSM
43160]
gi|284063451|gb|ADB74389.1| protein of unknown function DUF218 [Geodermatophilus obscurus DSM
43160]
Length = 209
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 18/180 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG+ PS +R+ + LY+ ++ G
Sbjct: 38 DAQPASDAIVVLGSA--------QYNGVPSSIFEARLEHALALYEEGVAPV----VVTVG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ L E+G+ D + + +DT ++ + + + +LV+
Sbjct: 86 GKADGDQFTEAESGRAYLTEAGIPEDALLAVEEGVDTLESMRAVGAAFDERGWSSAVLVT 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H R++ + GI +S + A + L+E L+ G
Sbjct: 146 DPWHAMRAERMAEDAGITADSSPTRQGPAVQT------RATQFRYILRETAAYLLYRATG 199
>gi|289435703|ref|YP_003465575.1| hypothetical protein lse_2342 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171947|emb|CBH28493.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 189
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 72/178 (40%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P P++ ++ R+ + + + ++++SG
Sbjct: 33 KPAENADTVLILGAKVNGNPASPSLVLQ------ERLDAAVVYLNNHPK----VSVVVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ V L+ G+ R+ I+ ET+S T +N S+ + ++V+
Sbjct: 83 GKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEENISNSNEKFE---LGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S YH+ R+ + + I+ ++ + +E + I A+
Sbjct: 140 SDYHMYRALMLAERQNIDVSGLPAESKT-----------MAKYKGMAREVLSITYAWV 186
>gi|260551279|ref|ZP_05825481.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260405736|gb|EEW99226.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 376
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 53 YQRPLLSPQWKKDGN---IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
Y R P K IV+LG G T+ I + + R+ +T+ + K
Sbjct: 194 YVRKNPLPTQPKKLTEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEVEKQN-- 249
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
H I++SG E+ L + GV+ LE +S++T +N +FSS +++
Sbjct: 250 ---HLPIVLSG--------VEAPYMQAWLKKRGVDAK--LLEQRSMNTCENTRFSSLLLQ 296
Query: 170 NMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
G ++LV+ YH+ R++ F GI T + P N+ + A
Sbjct: 297 KKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVIAPMPTPLTRWQPSIQNYDHSRRANY 356
Query: 229 EYIGILIAYYRG 240
E + + G
Sbjct: 357 ELLATIRDMLFG 368
>gi|299769642|ref|YP_003731668.1| hypothetical protein AOLE_07010 [Acinetobacter sp. DR1]
gi|298699730|gb|ADI90295.1| hypothetical protein AOLE_07010 [Acinetobacter sp. DR1]
Length = 373
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 47 KHLQFSYQRPLLSPQWK-KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+ +++ + PL +P K IV+LG G T+ I + + R+ +T+ + K
Sbjct: 187 QKIEYVRKNPLPAPAKKLSQPYAIVVLGGGLTLDKN--GKDIVVNGYTRLRLEKTLEVEK 244
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+ I++SG E+ L E GV+ LE +S++T +N +FSS
Sbjct: 245 QNQ-----LPIVLSG--------VEAPYMQAWLKERGVDAK--LLEKRSMNTCENTRFSS 289
Query: 166 SMIKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+++ G ++LV+ YH+ R++ F GI T + P N+ +
Sbjct: 290 LLLQKKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVVAPMPTPLTRWQPSVQNYDHSR 349
Query: 225 LALKEYIGILIAYYRG 240
A E + + G
Sbjct: 350 RANYELLATIRDMLFG 365
>gi|307705359|ref|ZP_07642221.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307621146|gb|EFO00221.1| conserved hypothetical protein [Streptococcus mitis SK597]
Length = 259
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 88/237 (37%), Gaps = 24/237 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++ F ++S+ + + F + I + + Y L
Sbjct: 19 IVILLFFALMSFRLGGRHELFYTNHFLNILFAFIAYSYFIFGFAFVAFIL--YSILYLFI 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
KK + I++ G G + RI + + Y K + + II SG
Sbjct: 77 PKKKHYDFIIIHGAGLLDGEK-------VTPLLKRRIDKAVEAY--YKSKNSNIKIIASG 127
Query: 121 GDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-L 178
G ++E+ N LLE V +D I LE QS T++N FS + + + K
Sbjct: 128 GKGADEKISEAQAITNYLLEETDVPQDAIILEDQSRTTYENLLFSKELGEELVAKPQFLF 187
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
V++ YH+ R+ Y + + +A +Y+ ++EY+ + +
Sbjct: 188 VTNDYHVFRTSTYARKLNMKGDGLGC-----------RTAGYYIPSAFIREYVALCV 233
>gi|146318649|ref|YP_001198361.1| hypothetical protein SSU05_0995 [Streptococcus suis 05ZYH33]
gi|146320855|ref|YP_001200566.1| hypothetical protein SSU98_1008 [Streptococcus suis 98HAH33]
gi|253751768|ref|YP_003024909.1| hypothetical protein SSUSC84_0901 [Streptococcus suis SC84]
gi|253753592|ref|YP_003026733.1| membrane protein [Streptococcus suis P1/7]
gi|253755527|ref|YP_003028667.1| membrane protein [Streptococcus suis BM407]
gi|145689455|gb|ABP89961.1| Uncharacterized conserved protein [Streptococcus suis 05ZYH33]
gi|145691661|gb|ABP92166.1| Uncharacterized conserved protein [Streptococcus suis 98HAH33]
gi|251816057|emb|CAZ51677.1| putative membrane protein [Streptococcus suis SC84]
gi|251817991|emb|CAZ55773.1| putative membrane protein [Streptococcus suis BM407]
gi|251819838|emb|CAR45817.1| putative membrane protein [Streptococcus suis P1/7]
gi|319758117|gb|ADV70059.1| hypothetical protein SSUJS14_0982 [Streptococcus suis JS14]
Length = 336
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 25/233 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + Y + ++ + +S F ++F ++G+ + I++ L L +
Sbjct: 102 MGLAVALTFYLFIAPFVVQSLSAISFFNMVFVYVGFFVSYAIIISMLYTMSSFVNLVNFF 161
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +V+LG G P + SRI + + +Y+ +I+SGG
Sbjct: 162 PGKLDYVVVLGAGLIGDKVTPLL--------ASRIEKGIAIYQKQP----GSKLIMSGGQ 209
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+AE N LE GV +DI +E QS +T +N +FS +++K G LV++
Sbjct: 210 GPDELIAEGQAMANYALEKGVPAEDILIENQSTNTEENLKFSYALMKP--GSRFALVTNY 267
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
YH+ R+ L + I + + ++ ++E++G ++
Sbjct: 268 YHVFRALLLARQLRIKCIGYGA-----------KTKFYFSLNAFIREFVGYVV 309
>gi|126650479|ref|ZP_01722702.1| hypothetical protein BB14905_07813 [Bacillus sp. B14905]
gi|126592635|gb|EAZ86634.1| hypothetical protein BB14905_07813 [Bacillus sp. B14905]
Length = 191
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 81/221 (36%), Gaps = 32/221 (14%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + + ++ + + + + + + ++ N +++LG
Sbjct: 2 KKWLIRVGVVLIFIAIVLYIWLGKEIERGVE---------ANADGSANYMIILGAKVKPG 52
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
PS SR+ E + Q +I+SGG ES V + L
Sbjct: 53 -------GVPSLSLKSRLEEAVPYLVKYPQ----VKVIVSGGQGPDEDRTESSVMRDYLE 101
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
++G++ I E QS T++N FS +I + K I +VS+ +HLKR++ +
Sbjct: 102 QNGIDATRIIEEDQSTSTYENLVFSKELI-PKETKKITIVSNDFHLKRAKYLAESLDFEV 160
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + +L ++E +L Y G
Sbjct: 161 DVVSAKTPKSVE-----------AKLKIRERAALLKTYIVG 190
>gi|315302477|ref|ZP_07873325.1| integral membrane protein [Listeria ivanovii FSL F6-596]
gi|313629156|gb|EFR97441.1| integral membrane protein [Listeria ivanovii FSL F6-596]
Length = 344
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 92/234 (39%), Gaps = 24/234 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I ++ W + + + +G+ + F YQ + +
Sbjct: 107 IIALIVIWFGHILQANSPVLGILIVFIMTVVGYFSFLFLSFLLSTFIYQYSF----PRYN 162
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC-KQHSMHCTIIISGGDPQ 124
+ +++LG+G S SR+ + Y+ + T I+SGG
Sbjct: 163 QDFLIVLGSGLIGGD-------RVSPLLASRLDRAISFYQKQLMKKGKRATFIVSGGQGT 215
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAY 183
++E+ L+ G++ I +E +S++T QN QFS + + L ++ +
Sbjct: 216 NETISEAEAMRGYLISKGIDETFIIMENKSVNTLQNMQFSKKKMDVIMPDYNSLFSTNNF 275
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
HL R+ LY + G+ ++ + +A +Y+ ++E+I I++ Y
Sbjct: 276 HLFRASLYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAIIVMY 318
>gi|257063415|ref|YP_003143087.1| uncharacterized membrane protein [Slackia heliotrinireducens DSM
20476]
gi|256791068|gb|ACV21738.1| uncharacterized membrane protein [Slackia heliotrinireducens DSM
20476]
Length = 212
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 15/186 (8%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++ +L+ + + G + ++ + + IV+LG
Sbjct: 2 VKGFLKFLLALLIAAVVVVGGLNAWVVMSATTDDYTLEQAQELDVQAECIVVLGASVLPD 61
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
PS R+ + LY+S +I+ G+ + E +
Sbjct: 62 -------GTPSDILKGRLDAAIALYESG-----AAPVIVMSGNGTESNYDEPFHMKQYAI 109
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
E GV D I L+ T+ +++ + I+++ YHL RS + G++
Sbjct: 110 EQGVPADAIVLDRAGYHTYDTMWRLANIYGA---DSCIVITQEYHLYRSVFDAKSCGMDA 166
Query: 200 KASCSD 205
SD
Sbjct: 167 VGVVSD 172
>gi|292558336|gb|ADE31337.1| hypothetical protein SSGZ1_0880 [Streptococcus suis GZ1]
Length = 336
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 99/233 (42%), Gaps = 25/233 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + Y + ++ + +S F ++F ++G+ + TI++ L L +
Sbjct: 102 MGLAVALTFYLFIAPFVVQSLSAISFFNMVFVYVGFFVSYTIIISMLYTMSSFVNLVNFF 161
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +V+LG G P + SRI + + +Y+ +I+SGG
Sbjct: 162 PGKLDYVVVLGAGLIGDKVTPLL--------ASRIEKGIAIYQKQP----GSKLIMSGGQ 209
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+AE N LE GV +DI +E QS +T +N +FS +++K G LV++
Sbjct: 210 GPDELIAEGQAMANYALEKGVPAEDILIENQSTNTEENLKFSYALMKP--GSRFALVTNY 267
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
YH+ R+ L + I + + ++ ++E++G ++
Sbjct: 268 YHVFRALLLARQLRIKCIGYGA-----------KTKFYFSLNAFIREFVGYVV 309
>gi|310829787|ref|YP_003962144.1| integral membrane protein [Eubacterium limosum KIST612]
gi|308741521|gb|ADO39181.1| integral membrane protein [Eubacterium limosum KIST612]
Length = 403
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 97/240 (40%), Gaps = 31/240 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL + ++S+ ++ + + + +L + + +L + RP+L
Sbjct: 156 ILLWLVLGMLSFKNVEINDVLSVIMLVVNTILLYLL--LVFSNFILSSFIYGIYRPVL-- 211
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK-QHSMHCTIIIS 119
+ I++LG+G + + RI +++Y+ + +I+S
Sbjct: 212 ----RQDYIIVLGSGLMGG-------NKVTPLLAGRIDRALKVYRRQADKKKSPPMLIMS 260
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-- 177
GG +AE LE G+ D I +E QS +T++N FS +I++ +
Sbjct: 261 GGQGGDEQIAEGEAMKQYALEQGIPEDHILVEDQSKNTYENMLFSRQLIESREADMKHLR 320
Query: 178 --LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+S YH+ R+ +Y + G+ + + + ++ L+EY+ IL
Sbjct: 321 ILFSTSNYHVFRAGIYARKAGLKAQGIGA-----------KTKFYFWYNALLREYVAILA 369
>gi|329298742|ref|ZP_08256078.1| hypothetical protein Pstas_23624 [Plautia stali symbiont]
Length = 156
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 13/151 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E + ++ Q +I +G + + + V + GV D I + Q
Sbjct: 3 RVTEGVCQWRRYPQ----AKMIFTGAAAGYNPRSNASVAADVARSLGVPDDAIIVLDQPH 58
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NA 209
DT + A I LV+SA HL R+ +FQ G+N + ++ L +
Sbjct: 59 DTGEEALAVKQTIGQQPFL---LVTSANHLPRAMHFFQSAGLNPLPAPANQLAITSPISV 115
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +P ++ A+ E +G++ RG
Sbjct: 116 WDRTLPSLLWLSHSQRAVYETLGLIWQRLRG 146
>gi|296132533|ref|YP_003639780.1| protein of unknown function DUF218 [Thermincola sp. JR]
gi|296031111|gb|ADG81879.1| protein of unknown function DUF218 [Thermincola potens JR]
Length = 239
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 67/221 (30%), Gaps = 26/221 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + F+ + + + + K + S + + ++LG
Sbjct: 16 RKKWVTGSICLFLGVLTVLS-LVFTYYCHKIDKNGKTGVYTSAEDMPPATVAIVLGAKVY 74
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
S R+ + LYK+ K + T GD + E
Sbjct: 75 PNGG-------VSTVLADRLNTGVELYKAGKVKKILLT-----GDHGQTNYDEVNTMREF 122
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+L G+ +DI ++ T+ + + + + ++V+ +HL R+ + GI
Sbjct: 123 MLRKGIPAEDIFMDHAGFSTYDSMYRARDVFRVKD---AVVVTQQFHLPRALYIARTMGI 179
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+D + +E + + A
Sbjct: 180 EATGLIADKRT-----YTGARYLE-----FREALARVKALL 210
>gi|254520411|ref|ZP_05132467.1| exported protein [Clostridium sp. 7_2_43FAA]
gi|226914160|gb|EEH99361.1| exported protein [Clostridium sp. 7_2_43FAA]
Length = 217
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 15/148 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG G PS R+ ++ +++ ++ +
Sbjct: 34 DIPSENDAIIVLGAGVRAD-------GTPSDILADRLETSLEAFEAGLGNTFLLS----- 81
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD + E +L++ ++ I ++ T+ + + K I+V+
Sbjct: 82 GDHGREEYNEVGSMKKYILQNDIDEKIIFMDHAGFSTYDTMYRAKEIFK---VDKAIIVT 138
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN 208
+ YHL R+ + GI+ SD
Sbjct: 139 NEYHLPRALYIARKLGIDAYGINSDKRQ 166
>gi|116511272|ref|YP_808488.1| hypothetical protein LACR_0463 [Lactococcus lactis subsp. cremoris
SK11]
gi|116106926|gb|ABJ72066.1| hypothetical protein LACR_0463 [Lactococcus lactis subsp. cremoris
SK11]
Length = 178
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 23/182 (12%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ +D + I++LG+ +P+ + R+ + L Q II+
Sbjct: 18 TADKARDIDTILVLGSRINADE-------QPAKITQERLDAALLLAAKNPQ----AKIIV 66
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SG ++E+ L+ + D I E ++ DT +N +S +
Sbjct: 67 SGAKGADEPVSEAFSMKKYLMAHAISADRIISENKATDTAENLSYSKKYFHGKTV----V 122
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +HL R+ G+ + + P E +G++ A+
Sbjct: 123 VTNDFHLYRALYLASRQGLKVEGYAAKTEVTNPLYYPNYYG--------HEVLGLIYAFV 174
Query: 239 RG 240
G
Sbjct: 175 FG 176
>gi|256003507|ref|ZP_05428497.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|255992531|gb|EEU02623.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941425|gb|ADU75459.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 262
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/239 (15%), Positives = 89/239 (37%), Gaps = 32/239 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L++ I L L + + + L F + +L+ L F+
Sbjct: 42 LVAGIVLTFVASVRLSGKGDMLRIKNTILRRLFFGALIAFAGSFVLILGLIFA----SSD 97
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + +V+LG G P + R+ + + ++ + ++++
Sbjct: 98 TDKNVEVDYLVILGAGLKGDRITPTFQY--------RLDKGVEYLRANPE----LKVVVT 145
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN---MQGKNI 176
GG L E+ L+ G++ D I +E ++ T +N ++++ ++K I
Sbjct: 146 GGQGPGEDLTEAEAMKRYLVSHGIDEDRIIMEDRATSTNENMKYTAEVLKQLTGRSDYRI 205
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++V++ +H+ R+++ +H G + L ++EY ++
Sbjct: 206 MIVTNDFHMFRAKILARHNGFTPYGITV-----------PTNPVVLVNSYIREYFAVVK 253
>gi|257869611|ref|ZP_05649264.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
gi|257803775|gb|EEV32597.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
Length = 356
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 97/238 (40%), Gaps = 30/238 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+ + + S+ H L + +F + LL+ F+ + L + + + P
Sbjct: 117 IVLTILLVSDSFLHALPSWVSVLFTIFPASLLYFFVVFL---NFLSISVIYQFNHP---- 169
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIIS 119
+ D + I++LG G S RI + + Y + ++S
Sbjct: 170 --RYDQDFIIVLGAGLLNGEK-------VSPLLAQRIDKAIAFYHLQFRAKKTAPRFLMS 220
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNII 177
GG + E++ + G+ +I +E S T++N +FS ++ +++ G + I
Sbjct: 221 GGQGSDEKIPEAVAMKEYAVSQGIPESEILVEANSTTTYENMKFSKEIMDSLRPEGYHAI 280
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
VS+ YH+ R+ +Y + S +A +YL L+EYI IL
Sbjct: 281 FVSNNYHIFRAGMYADQVHVKADGIGS-----------HTAFYYLPNAFLREYIAILF 327
>gi|110802817|ref|YP_698118.1| hypothetical protein CPR_0793 [Clostridium perfringens SM101]
gi|110683318|gb|ABG86688.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 206
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 25/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
KD ++LG G PS R+ E + + + +I+
Sbjct: 37 DINQLKDVEYEIILGAGLYGDK--------PSPILQERLEEGL----KYLKLHPNTKVIV 84
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII- 177
SGG + ES + G+ + I E +S TFQN +FS +++
Sbjct: 85 SGGQGSNEPIPESEAMKIFFVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHANKDEV 144
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V+S +HL R++ + I + S F + ++E+ ++
Sbjct: 145 LIVTSDFHLFRAKEIADYLNIKNEGLPSKTPI-----------FLRVQYMVREFPAMIKL 193
Query: 237 YY 238
Sbjct: 194 LL 195
>gi|313636439|gb|EFS02193.1| conserved hypothetical protein [Listeria seeligeri FSL S4-171]
Length = 189
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 72/178 (40%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P P++ ++ R+ + + + ++++SG
Sbjct: 33 KPAENADTVLILGAKVNGNPAYPSLVLQ------ERLDAAVVYLNNHPK----VSVVVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ V L+ G+ R+ I+ ET+S T +N S+ + ++V+
Sbjct: 83 GKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEENISNSNEKFE---LGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S YH+ R+ + + I+ ++ + +E + I A+
Sbjct: 140 SDYHMYRALMLAERQNIDVSGLPAESKT-----------MAKYKGMAREVLSITYAWV 186
>gi|329768261|ref|ZP_08259762.1| hypothetical protein HMPREF0428_01459 [Gemella haemolysans M341]
gi|328837460|gb|EGF87089.1| hypothetical protein HMPREF0428_01459 [Gemella haemolysans M341]
Length = 340
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 89/235 (37%), Gaps = 25/235 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ FL+V Y + L+ ++ ++ + +
Sbjct: 105 LATFFLLVGYIVYWPRVATYTRDNIALNTLYVYVSLVVLYFLCIAMSYLVSSVLNFINIL 164
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +V+LG G P + SRI + +++YKS +I+SGG
Sbjct: 165 PRKIDYVVVLGAGLIGERVTPLL--------ASRIRKGIKVYKSNP----GSKLIMSGGQ 212
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ N LE GV+ DI LE +S T QN FS I K+ +V++
Sbjct: 213 GPDEVVSEAFAMKNYALEQGVDEKDIILEDKSTSTEQNIIFSKKFIPA--DKSFAVVTNY 270
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
YH+ R+ + + G S + ++ ++E+IG L
Sbjct: 271 YHVYRALVQARTLGFRCIGYGS-----------PTKFYFSLNAFIREFIGYLYFK 314
>gi|302534287|ref|ZP_07286629.1| integral membrane protein [Streptomyces sp. C]
gi|302443182|gb|EFL14998.1| integral membrane protein [Streptomyces sp. C]
Length = 257
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 64/201 (31%), Gaps = 24/201 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S R+ + + + + L+ + P D + V+ G G
Sbjct: 44 RSRRRAVQAVMALCVLALLPSTWTHAAAADRLRTTAAAP--------DAGVAVVFGAGLW 95
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ P+ R+ + LY++ K +++ GD + E
Sbjct: 96 --------KGRPTPYLAYRLDAAVELYRAGK-----VKVVLVTGDNSRTEYDEPGAMRAY 142
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L G+ D I + DT+ + + +L+S +H+ R+ Q G+
Sbjct: 143 LRGHGIPDDRIVSDYAGFDTWDSCVRVREIFGVR---RAVLISQHFHIHRAVALCQAAGV 199
Query: 198 NTKASCSDYLNAYYSIIPLSA 218
++ D + +
Sbjct: 200 DSYGVGVDDEHDSTWYYGGAR 220
>gi|291545077|emb|CBL18186.1| Uncharacterized conserved protein [Ruminococcus sp. 18P13]
Length = 259
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ ++ ++LG PS R+ + C +++SG
Sbjct: 99 KRTQNADVAIVLGCKVNG--------TRPSIMLQQRLDAAYAYWTEHP----DCLLVVSG 146
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIIL 178
G ++E+ L E GV D I E +S T +N +FS ++ K I L
Sbjct: 147 GKGSNEDISEAACMYQYLTEKGVPADRILQEDRSTSTRENLRFSKELLAERGCMPKEIAL 206
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +H R+ + + G + + + +IP ++E++GIL
Sbjct: 207 VTNEFHQLRASMIAKDCGWTVSSIPA---HTQPWLIP--------TYWVREWLGILHHTL 255
Query: 239 RG 240
G
Sbjct: 256 LG 257
>gi|260554696|ref|ZP_05826917.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|260411238|gb|EEX04535.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
Length = 376
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 18/188 (9%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
P+ + IV+LG G T+ I + + R+ +T+ + + H
Sbjct: 198 NPLPAQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEV-----EKKNH 250
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I++SG E+ L GV+ LE +S++T +N +FSS +++ G
Sbjct: 251 LPIVLSG--------VEAPYMQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLLQKKGG 300
Query: 174 -KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++LV+ YH+ R++ F GI T + P N+ + A E +
Sbjct: 301 APTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSIQNYDHSRRANYELLA 360
Query: 233 ILIAYYRG 240
+ G
Sbjct: 361 TIRDMLFG 368
>gi|255527086|ref|ZP_05393975.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296188150|ref|ZP_06856542.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
gi|255509238|gb|EET85589.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296047276|gb|EFG86718.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
Length = 197
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 79/220 (35%), Gaps = 33/220 (15%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
RK+ +L+F I I ++ + + + I++LG
Sbjct: 3 RFRKLVLYGIGILVFLVI---IFAFQVIYFGES---------SKPEKSDCIIVLGCKVYG 50
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS R E +RL+K II+SGG Q ++E+ L
Sbjct: 51 S--------TPSPFLIWRTDEGLRLFKEGYGKY----IIVSGGKGQGESISEAEAMKRYL 98
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV+ I LE +S T N S S+++ K I+VS+ YHLKR+ L GI
Sbjct: 99 VSKGVDSSKIILEDKSASTMANLINSKSIMEKKNFKTAIIVSNKYHLKRASLMATQEGIK 158
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S L+E ++ Y+
Sbjct: 159 ASYSGVFVKPYKTD---------EFVGYLREVPALMKYYF 189
>gi|317496202|ref|ZP_07954562.1| hypothetical protein HMPREF0432_01166 [Gemella moribillum M424]
gi|316913777|gb|EFV35263.1| hypothetical protein HMPREF0432_01166 [Gemella moribillum M424]
Length = 355
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 91/235 (38%), Gaps = 24/235 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L I L++ Y R + ++ +I ++ I + + +
Sbjct: 107 LGTIILLIGYVVWWPSIGRYTYESMTLNGIYIYITLVVLYFICIGVSYLAASTLNIINLL 166
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +V+LG G P + SRI +++Y +I+SGG
Sbjct: 167 PRKLDYVVVLGAGLIGERVTPLL--------ASRIRTGIKIYSKHP----GSKLIMSGGQ 214
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ N LE GV +DI +E +S +T +N +FS ++K+ LV++
Sbjct: 215 GADEVVSEAFAMKNYALEQGVSEEDIIMEDKSTNTEENIKFSKRLMKD-VNSRFALVTNY 273
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
YH+ R+ + + G + + ++ ++E+IG L
Sbjct: 274 YHVYRALVLAKTLGFRCIGYGA-----------PTKFYFTLNAFIREFIGYLYLK 317
>gi|262279426|ref|ZP_06057211.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259777|gb|EEY78510.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 373
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 21/192 (10%)
Query: 53 YQRPLLSPQWKKDGN---IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
Y R P K + IV+LG G T+ I + + R+ +T+ + +
Sbjct: 191 YVRKNPIPVQSKKLSEPYAIVVLGGGLTLDKN--GKDIVVNGYTRLRLEKTLEI-----E 243
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
H I++SG E+ L E GV + LE +S++T +N +FSS +++
Sbjct: 244 KQSHLPIVLSG--------VEAPYMQTWLKERGV--EAKLLEKRSMNTCENTRFSSLLLQ 293
Query: 170 NMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
G ++LV+ YH+ R++ F GI T + P N+ + A
Sbjct: 294 KKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVVAPMPTPLTRWQPSVQNYDHSRRANY 353
Query: 229 EYIGILIAYYRG 240
E + + G
Sbjct: 354 ELLATIRDMLFG 365
>gi|125974276|ref|YP_001038186.1| hypothetical protein Cthe_1772 [Clostridium thermocellum ATCC
27405]
gi|281418329|ref|ZP_06249349.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|125714501|gb|ABN52993.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|281409731|gb|EFB39989.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 262
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/239 (15%), Positives = 90/239 (37%), Gaps = 32/239 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L++ I L L + + + L F + +L+ L F+
Sbjct: 42 LVAGIVLTFVASVRLSGKGDMLRIKNTILRRLFFGALIAFAGSFVLILGLIFA----SSD 97
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + +V+LG G P + R+ + + ++ + ++++
Sbjct: 98 TDKNVEVDYLVILGAGLKGDRITPTFQY--------RLDKGVEYLRANPE----LKVVVT 145
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN---MQGKNI 176
GG L E+ L+ G++ D I +E ++ T +N ++++ ++K I
Sbjct: 146 GGQGPGEDLTEAEAMKRYLVSHGIDEDRIIMEDRATSTNENMKYTAEVLKQLTGRSDYRI 205
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++V++ +H+ R+++ +H G + + L ++EY ++
Sbjct: 206 MIVTNDFHMFRAKILARHNGFTPYGITA-----------PTNPVVLVNSYIREYFAVVK 253
>gi|238916610|ref|YP_002930127.1| hypothetical protein EUBELI_00667 [Eubacterium eligens ATCC 27750]
gi|238871970|gb|ACR71680.1| Hypothetical protein EUBELI_00667 [Eubacterium eligens ATCC 27750]
Length = 258
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/244 (19%), Positives = 95/244 (38%), Gaps = 30/244 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCF----MLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+I+L+ + + L ++R + +L FI L ++ + +
Sbjct: 39 FIFIWLLGAVFFGLVFAVRVLEIKGIIHVAKVLRICFIVIMATGASLFIFIE-ALIIKGM 97
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K + + I++LG + +R+ + TII+
Sbjct: 98 MAKPKDNCDYIIVLGCQIRGD--------HITRSLKNRLDVAVSYAIDNP----DTTIIV 145
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG + E+ N L+ G++ I E S DT +N ++S I+N + +
Sbjct: 146 SGGRGKGENTTEAFAMYNYLVSKGIDGSRIIQEDNSTDTSENMKYSVQYIEN-TDSLVGI 204
Query: 179 VSSAYHLKRSQLYFQHFGINTK-ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V++ +H+ RS+L +H G+N ++ S + ++E IGI+ +
Sbjct: 205 VTNNFHIARSRLLARHAGLNNTCGMPAE-----------SDHVLFINYMVREAIGIVKDF 253
Query: 238 YRGN 241
GN
Sbjct: 254 VFGN 257
>gi|253577135|ref|ZP_04854456.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843517|gb|EES71544.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 228
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 82/223 (36%), Gaps = 24/223 (10%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+RK F +++ IGW + +L + + P + + ++LG
Sbjct: 19 RKGRVRKRIFRWGLVVISLGIGWML---YVLAQIGSIERNPAANSDLSDPAEVGIVLGAA 75
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
EPS R+ ++++ YK+ K T + D E+
Sbjct: 76 LWGD--------EPSPGLRERLDQSLKDYKAGKFQWFLLTGGL---DTATSQYTEAEGMA 124
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N L + GV R+ + LE ++ T++N +FS ++K ++++V+ +H R+ Q
Sbjct: 125 NYLEQHGVPREKMLLENKATSTYENLKFSQEILKERGFTSVLIVTHTFHGNRAYEIAQAL 184
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ S + +P + +E +
Sbjct: 185 NYE-QPRLSLTSSKVLKPLPNT---------FREILAYTKWKL 217
>gi|323467429|gb|ADX71116.1| Membrane protein [Lactobacillus helveticus H10]
Length = 343
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 87/235 (37%), Gaps = 28/235 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + + + +++ ++ + ++ +++ L
Sbjct: 112 LAMGIVIIFFLFFYPQLGKFSHDSWLVYPYGFLWLVIIYLVTIMMMYTLTAWINLINWHV 171
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +V+LG G P + +RI + +Y+ +I+SG
Sbjct: 172 ---PHLDYVVVLGAGIIGKTVTPLL--------AARITRGIEIYQKNP----GSKLIMSG 216
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ + G+ ++DI +E +S T +N +FS +++K +V+
Sbjct: 217 GQGPGEDIPEAEAMAEYAINLGIPKEDIIIENKSRTTNENLRFSHALMKPN--SKFCIVT 274
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++YH+ R+ + + G+ + + ++ ++E+I L+
Sbjct: 275 NSYHVYRALVLAKRQGLQCIGYGA-----------KTKWYFTLNAFVREFIAYLV 318
>gi|328463014|gb|EGF34808.1| hypothetical protein AAULH_13826 [Lactobacillus helveticus MTCC
5463]
Length = 222
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 78/204 (38%), Gaps = 28/204 (13%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+ ++ +++ L + +V+LG G P +
Sbjct: 22 FLWLVIIYLVTIMMMYTLTAWINLINWHV---PHLDYVVVLGAGIMGKTITPLL------ 72
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
+RI + +Y+ +I+SGG + E+ + G+ ++DI +E
Sbjct: 73 --AARITRGIEIYQKNP----GSKLIMSGGQGPGEDILEAEAMAEYAINLGIPKEDIIIE 126
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
+S T +N +FS +++K +V+++YH+ R+ + + G+ +
Sbjct: 127 NKSRTTNENLRFSYALMKPN--SKFCIVTNSYHVYRALVLAKRQGLQCIGYGA------- 177
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
+ ++ ++E+I L+
Sbjct: 178 ----KTKWYFTLNAFVREFIAYLV 197
>gi|254706642|ref|ZP_05168470.1| hypothetical protein BpinM_06564 [Brucella pinnipedialis
M163/99/10]
gi|261314102|ref|ZP_05953299.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261303128|gb|EEY06625.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 131
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E+ LL+ G + E +S +T +NA FS ++ + G+ +LV+SAYH+
Sbjct: 4 SAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMP 63
Query: 187 RSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ F+ G + A DY + + +AL+E+ G+ ++ G
Sbjct: 64 RAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGLAAYWWTG 122
>gi|281491044|ref|YP_003353024.1| hypothetical protein LLKF_0556 [Lactococcus lactis subsp. lactis
KF147]
gi|281374802|gb|ADA64322.1| Hypothetical protein LLKF_0556 [Lactococcus lactis subsp. lactis
KF147]
Length = 341
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 93/242 (38%), Gaps = 34/242 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+++ L + + + I+++ ++LL I + +L Y
Sbjct: 107 LLIAFPALFMLFTFSTKTIPQIIWYILLYILLIDIILCFLFAAYIL------YSWMSQMI 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+K + I++LG+G P ++ SR+ + + Y+ ++SG
Sbjct: 161 PLQKKIDYIIILGSGVRSEEVPPLLK--------SRLDKGIEYYQKNP----TAKFVVSG 208
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-----GKN 175
G ++E+ L + I E +S T++N FS +I +
Sbjct: 209 GQGADEPVSEAFAMRKYLHSQNIPNHQILFEDKSTTTYENMLFSKRIINEDWSDKEMPPS 268
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
II ++ YH+ R LY Q + + + +A ++L ++EYI +L+
Sbjct: 269 IIFSTNNYHVLRGSLYAQRVKLKVQGVGA-----------PTALYFLPTALIREYIALLL 317
Query: 236 AY 237
Sbjct: 318 HR 319
>gi|302529268|ref|ZP_07281610.1| predicted protein [Streptomyces sp. AA4]
gi|302438163|gb|EFL09979.1| predicted protein [Streptomyces sp. AA4]
Length = 331
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 86/215 (40%), Gaps = 23/215 (10%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ + L + + + + +L +++ LL P+ + +++LG+ P
Sbjct: 118 TVAGAIGLTALALFSYLGFLFCCYLGYAFLYSLLPPRS--GVDFVIVLGSRIIGGRVPPL 175
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ SR+ + +Y + II SGG E+ L G+
Sbjct: 176 L--------ASRLDKAKSVYLAECAAGADPVIIASGGQGPGESEPEAHAMAEYLRAGGIP 227
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ E +S T QN +FS ++ G ++V++ +H+ R+ + + G+N + +
Sbjct: 228 DSALLREDRSKTTEQNLEFSRRLMAERVPGYRCVIVTNNFHVLRTAIIAREAGVNGEVTG 287
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGI-LIAY 237
S ++++Y ++E++ I L
Sbjct: 288 S-----------RTSSYYWPSATIREFLAIFLRYR 311
>gi|300855460|ref|YP_003780444.1| hypothetical protein CLJU_c22840 [Clostridium ljungdahlii DSM
13528]
gi|300435575|gb|ADK15342.1| conserved membrane spanning protein [Clostridium ljungdahlii DSM
13528]
Length = 260
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K + I +LG G + R E ++ K +I
Sbjct: 98 NESHNKKPDYITILGGGISGR--------NMLLVQLQRTQEALKYIKQNP----GIKVIA 145
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN---MQGKN 175
SGG + ++E+ L++ GV+ +DI E +S +T +N +++ ++K +
Sbjct: 146 SGGQGRGEDISEAEAMRIYLVQHGVKNEDIIKEEKSKNTLENMKYTREILKKIDGRENIQ 205
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +V+S +H+ R++ + +G + + L ++EY G++
Sbjct: 206 LAVVTSNFHVFRAKFLAKRYGFQVEGVPAPV-----------NYLLLPNYCVREYFGVVK 254
Query: 236 AYY 238
++
Sbjct: 255 SFI 257
>gi|295106209|emb|CBL03752.1| Uncharacterized membrane protein [Gordonibacter pamelaeae 7-10-1-b]
Length = 214
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 25/175 (14%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+LG PS R+ + + LY++ M I GD
Sbjct: 41 GADAIVVLGASVFAD-------GTPSGILQDRLDDGIALYRAGAAPKM-----IMSGDNS 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E + + GV +DI + T+++ + + + + + YH
Sbjct: 89 TVSYNEVKAMKDYAIAQGVPSEDIFCDHAGFSTYESMYRAKHVFGAERIV---VATQTYH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L R+ Q G+ SDY A T+ L+E +++
Sbjct: 146 LYRALYSAQGLGVEALGVPSDYH----------AYSKQTQYDLREIPARTKDFFK 190
>gi|327440297|dbj|BAK16662.1| uncharacterized conserved protein [Solibacillus silvestris StLB046]
Length = 190
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 23/184 (12%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+L + +V+LG PS +R+ + K
Sbjct: 29 VLKNEADGSNEYVVILGAKVKPG-------GIPSQSLKNRLDAAVDYLKRYP----TVKA 77
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I++GG E+ V + L++ GV + I LE QS T++N F+ ++ +I
Sbjct: 78 IVTGGQGADEDRTEASVMADYLIKHGVAENRISLEDQSTTTYENLLFAKKLL-PDNTASI 136
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++S+ +HLKR+ + + G+ + T+ ++E + I+ A
Sbjct: 137 TIISNDFHLKRATILARKLGLKADVVAAPTPKVI-----------NTKSRIRERLAIIKA 185
Query: 237 YYRG 240
Y RG
Sbjct: 186 YTRG 189
>gi|229490318|ref|ZP_04384160.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322850|gb|EEN88629.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length = 206
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 68/219 (31%), Gaps = 27/219 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R + +L + + G + + + + + IV+LG
Sbjct: 3 RWTRRLIAGAVLMAVVLVGGTAFRVWQ---------VARIDDTRPADAIVVLGAA----- 48
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + +LYK II GG + E+ L +
Sbjct: 49 ---QYSGTPSSVFEARLEQAYKLYKRGVAPQ----IITVGGKQEGDEYTEAASGKMYLTD 101
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I DT + S+ + + + +LVS +H R++ + G+
Sbjct: 102 RGIPSSAITAVETGSDTLLSIDAVSAEMSSQGINSAVLVSDPWHSLRTRTMARDTGLQAW 161
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + A ++ +E +L
Sbjct: 162 TAPTRQGPAVFTRESQLHGIA------RETGALLWYQLT 194
>gi|237785260|ref|YP_002905965.1| hypothetical protein ckrop_0661 [Corynebacterium kroppenstedtii DSM
44385]
gi|237758172|gb|ACR17422.1| putative secreted protein [Corynebacterium kroppenstedtii DSM
44385]
Length = 216
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 72/225 (32%), Gaps = 32/225 (14%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L +++ ++ + + G + + + ++IV++G
Sbjct: 3 RWLGRTLWRVVVGAVLITAVLVCGT---ALRIWQFARH---------DDDTPSDVIVVMG 50
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS +R+ + +Y+ I GG + E+
Sbjct: 51 AA--------QYNGTPSEWFAARLDKAATMYQEGTAPV----IATLGGKQEGDQYTEAEA 98
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM--IKNMQGKNIILVSSAYHLKRSQLY 191
L + GV I + DT +A+ + +N + ++V+ +H R++
Sbjct: 99 GKMYLEKLGVPSSAIVPISDGSDTLTSARALAEYSHNENRHWSSAVVVTDPWHALRARTM 158
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ G T + + + + +S L E G++
Sbjct: 159 VRDQGFTTHSVSTRHGPSVWSRD------AQFSGILHETGGLIFY 197
>gi|134098087|ref|YP_001103748.1| hypothetical protein SACE_1501 [Saccharopolyspora erythraea NRRL
2338]
gi|291007454|ref|ZP_06565427.1| hypothetical protein SeryN2_23263 [Saccharopolyspora erythraea NRRL
2338]
gi|133910710|emb|CAM00823.1| hypothetical protein SACE_1501 [Saccharopolyspora erythraea NRRL
2338]
Length = 204
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 18/179 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ +++V+LG PS +R+ + + LY+ I+ G
Sbjct: 32 DERRPVDMVVVLGAAQYHGK--------PSDVLEARLKQALELYREGMTDH----IVTVG 79
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ L+E GV D I DT + + +++ + ++VS
Sbjct: 80 GRQTGDKYTEAQAGKKWLVEEGVPADRITDVDVGSDTLGSVRAVAALAGQHGWSSALIVS 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+H R++ FG+ T AS + I + + +E +L
Sbjct: 140 DPWHSLRARTMANDFGLETWASPT-----RSGPIVQTREI-QFQYIFRETGALLYYRLT 192
>gi|196232763|ref|ZP_03131614.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196223223|gb|EDY17742.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 225
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 15/214 (7%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L R+ F++ L F+ + + + + + ++ ++LG
Sbjct: 3 LSFLKRRSFWLVLTALALLFVAFVAGANYWV--IHSTREAIFTDLALLPKTDVALVLGTS 60
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P+ R+ RLY K ++ GD G E
Sbjct: 61 RYNGDGHS-----PNPFFLGRMNTAARLYHEGKVRH-----LLVSGDNGHVGYDEPTWMR 110
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ L+ GV R I L+ T + + ++ + +V+ +H+ RS + +
Sbjct: 111 DALIARGVPRSAITLDYAGFRTLDSMARAKNVFG---LQRFTIVTDDFHISRSVFLARSY 167
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
G++ S+ + ++S + +A E
Sbjct: 168 GLDVVGFPSERVAYWWSKKVRTRELASRTVAFLE 201
>gi|42519211|ref|NP_965141.1| hypothetical protein LJ1286 [Lactobacillus johnsonii NCC 533]
gi|41583499|gb|AAS09107.1| hypothetical protein LJ_1286 [Lactobacillus johnsonii NCC 533]
Length = 346
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 93/238 (39%), Gaps = 33/238 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+++++FL L + ++ +++ I I++ + S+ L
Sbjct: 118 IIAYLFLFPLVGKLTHNNFGTYIYLFINLVIIYLI------FIMMMYTLTSWIN--LVNI 169
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + +V+LG G P + +RI + +Y+ II+SGG
Sbjct: 170 KTKKLDYVVVLGAGLMGKKVTPLL--------AARINRGIEVYRRNP----GSKIIMSGG 217
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E++ E GV + DI +E +S T +N FS ++K +V++
Sbjct: 218 QGPGEEIPEAVAMAKYAEEKGVPKQDIIVEDKSKTTRENLIFSHKLMKP--DSRFAIVTN 275
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+YH+ R+ + + G+ + + ++ ++E+I L +R
Sbjct: 276 SYHVYRALVLAKRLGLQCIGYGA-----------KTKWYFTLNAFVREFIAYLTITWR 322
>gi|254428687|ref|ZP_05042394.1| conserved hypothetical protein [Alcanivorax sp. DG881]
gi|196194856|gb|EDX89815.1| conserved hypothetical protein [Alcanivorax sp. DG881]
Length = 204
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 72/189 (38%), Gaps = 7/189 (3%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
S+ PL +V+LG G R + + R+ L
Sbjct: 21 RSFLPPLPRRITGITPQAVVVLGAGRRQR----NGRFSLTTRGLRRLKLAAELAHEH-GL 75
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ + IS + +E+ + + L ++ E +S +T++NA FSS ++
Sbjct: 76 PLLVSGGISQTPMHDNEPSEADLMAEQALRRW-PTLNVIKEARSRNTWENACFSSELLAE 134
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
++L+S HL R+ L FQ G+ +A+ S +P + + E+
Sbjct: 135 RGMDEVMLISDRAHLPRALLCFQSQGVLAQAAWSK-RLPKQEWVPSAGALSMVPEIWYEW 193
Query: 231 IGILIAYYR 239
+ ++ + R
Sbjct: 194 LALVWYHVR 202
>gi|254229583|ref|ZP_04922995.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|151937866|gb|EDN56712.1| conserved hypothetical protein [Vibrio sp. Ex25]
Length = 244
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 74/234 (31%), Gaps = 27/234 (11%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+F + L S +++ + +L + I ++ + + +
Sbjct: 1 MLFSRIRSKWKLKFSWKRLALILSISVLSLLVSVIAIDRWVVLQAK---ESIFTEYEPIP 57
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ V+LG I + RI + LY K + GD
Sbjct: 58 QHEVAVVLGTSKYIGKI-------LNTYYTHRINAAIELYNQGKVKQFLLS-----GDNA 105
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E LL++GV + I L+ T + + + + + ++V+ +H
Sbjct: 106 HRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFH 162
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+R+ + I+ + N T + ++E + + A+
Sbjct: 163 CERALFIADAYNIDAQCLAVAGPTT---------NKQKTSMRIRELLARVKAFL 207
>gi|291451163|ref|ZP_06590553.1| integral membrane protein [Streptomyces albus J1074]
gi|291354112|gb|EFE81014.1| integral membrane protein [Streptomyces albus J1074]
Length = 228
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 25/190 (13%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRP--LLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+++ + + + L S + + V+ G G
Sbjct: 21 ALLAVMVLCVLALLPAAWM-------RFSADGHLRSTADVERTEVAVVFGAGLWGE---- 69
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
EPS R+ LY++ + +++ GD + E L+ GV
Sbjct: 70 ----EPSPYLARRLDAAAELYEAGRTE-----VVLVTGDNSREEYDEPEAMRRYLVARGV 120
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
I + DT+ + + + +L+S +H+ R+ + G+
Sbjct: 121 PDHRIVSDYAGFDTWDSCVRARKIFG---VDKAVLISQGFHIHRAVTLCRSAGLQAYGIG 177
Query: 204 SDYLNAYYSI 213
D +
Sbjct: 178 VDDRHDVSWY 187
>gi|239979284|ref|ZP_04701808.1| integral membrane protein [Streptomyces albus J1074]
Length = 254
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 25/190 (13%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRP--LLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+++ + + + L S + + V+ G G
Sbjct: 47 ALLAVMVLCVLALLPAAWM-------RFSADGHLRSTADVERTEVAVVFGAGLWGE---- 95
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
EPS R+ LY++ + +++ GD + E L+ GV
Sbjct: 96 ----EPSPYLARRLDAAAELYEAGRTE-----VVLVTGDNSREEYDEPEAMRRYLVARGV 146
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
I + DT+ + + + +L+S +H+ R+ + G+
Sbjct: 147 PDHRIVSDYAGFDTWDSCVRARKIFG---VDKAVLISQGFHIHRAVTLCRSAGLQAYGIG 203
Query: 204 SDYLNAYYSI 213
D +
Sbjct: 204 VDDRHDVSWY 213
>gi|237748053|ref|ZP_04578533.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379415|gb|EEO29506.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 203
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 32/221 (14%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + I+ C L++ F T+ KK + ++LG
Sbjct: 1 MTKWIKVALVSFCVFLIYIFCSIAWFSTV----------------DEKKTADAAIILGAA 44
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS RI + LYK+ +I +GG + +E+ V
Sbjct: 45 AWYK--------RPSPVFEERINHGIWLYKNG----YVKKLIATGGKSKNAPFSEAFVAR 92
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+++ + +DI +E +SL T +N Q + +++ + I+VS H++R+
Sbjct: 93 RYAMKNQIPEEDILIEEESLTTRENLQNAKKLMEENHLSSAIIVSDPMHMRRAMQIANDL 152
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
GI +S + Y S + I ++
Sbjct: 153 GIKAWSSPTP-STKYASWQAKIQFLFQET--WH-MIAYIVY 189
>gi|301053252|ref|YP_003791463.1| hypothetical protein BACI_c16640 [Bacillus anthracis CI]
gi|300375421|gb|ADK04325.1| putative membrane protein [Bacillus cereus biovar anthracis str.
CI]
Length = 179
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D + I++LG+ +++ RI + + I+SG
Sbjct: 35 NATYDADYIIVLGSKVNGTKPSYSLQY--------RIDKAAE----YLKSHEKAIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N+L++ + D I +E +S T +N +FS +I + K + +V+
Sbjct: 83 GKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGM-IVT 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
+ +H+ R++ G+ + + + +IP
Sbjct: 142 NDFHMFRAKKIAAKQGLQLEGLPA--VTPKRIVIPS 175
>gi|260558934|ref|ZP_05831121.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|260075042|gb|EEW63357.1| conserved hypothetical protein [Enterococcus faecium C68]
Length = 350
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 128 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 178
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y + + +++ I++ G + E++
Sbjct: 179 LINGET-------VSPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAMAM 231
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ S+ YH+ R+ LY
Sbjct: 232 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 291
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 292 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 322
>gi|257876627|ref|ZP_05656280.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257810793|gb|EEV39613.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 356
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 97/242 (40%), Gaps = 34/242 (14%)
Query: 1 MLLSWIFLIVSY----WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
++L+ + ++ + H IR +F + LL+ F+ + L + + + P
Sbjct: 114 LILAVVLTVLLFSDTLLHFFPDWIRTLFGIVPLSLLYLFVVFL---NFLSISVIYQFNHP 170
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCT 115
+ + + I++LG G T S RI + Y+ K
Sbjct: 171 ------RYNQDFIIVLGAGLLNGTT-------VSPLLAKRINTAISFYESQFKAKKTAPR 217
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+++SGG L E++ + + GV +I +ET S T++N +FS ++ +++
Sbjct: 218 LLMSGGQGSDEQLPEAVAMKDYAIAQGVPEGEILVETNSTTTYENMKFSKEIMDSLKPNG 277
Query: 176 II--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ LY + + +A +YL L+E++ I
Sbjct: 278 YKAIFASNNYHIFRAGLYADQAQLKADGIGA-----------PTAFYYLPNAFLREFVAI 326
Query: 234 LI 235
L
Sbjct: 327 LF 328
>gi|160914657|ref|ZP_02076871.1| hypothetical protein EUBDOL_00664 [Eubacterium dolichum DSM 3991]
gi|158433197|gb|EDP11486.1| hypothetical protein EUBDOL_00664 [Eubacterium dolichum DSM 3991]
Length = 255
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 79/216 (36%), Gaps = 33/216 (15%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + +L + I+ ++L + +++LG G
Sbjct: 68 KFLRIAAIGLLTIFLTSFLIVEGLILA---------NGLHTPNEKLEYVIILGAGLNKDK 118
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
S R+ E + +K + T I+SGG ++E+ + L+
Sbjct: 119 --------ISLSLQHRLDEAIAYHKQYQ----DTTFIVSGGQGINESISEAEAMRSYLVA 166
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ + I E S TF+N FS IK+ + + ++++++H+ R+ + + +
Sbjct: 167 HGIPQHQIIEEELSTSTFENFAFSKEYIKDKT-QKVGVITNSFHMLRALILARQQDLQAV 225
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ S +++EY GI A
Sbjct: 226 GIPA-----------KSDLLTYPCFSIREYFGIWKA 250
>gi|294629212|ref|ZP_06707772.1| SanA protein [Streptomyces sp. e14]
gi|292832545|gb|EFF90894.1| SanA protein [Streptomyces sp. e14]
Length = 219
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 63/199 (31%), Gaps = 23/199 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R++ + + + + T L L + ++ ++ G G
Sbjct: 8 RRRLVQAVMAVCVLALLP----ATWLYVSTGDR----LRTTADAPRTDVAIVFGAGLWHG 59
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
EPS R+ + LY+ + +++ GD + E L
Sbjct: 60 -------GEPSPYLAHRLDAAVTLYREGR-----IKVVLVTGDNSRTDYDEPDAMRAYLT 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + DT+ + + + +LVS +H++R+ G+++
Sbjct: 108 RHGVPGARIVSDYAGFDTWDSCVRAKKVFG---VDRAVLVSQGFHIRRAVALCDAAGVDS 164
Query: 200 KASCSDYLNAYYSIIPLSA 218
D ++ +
Sbjct: 165 YGVGVDAVHDVTWYYGGAR 183
>gi|325965245|ref|YP_004243151.1| hypothetical protein Asphe3_39290 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323471332|gb|ADX75017.1| uncharacterized conserved protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 331
Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 98/264 (37%), Gaps = 49/264 (18%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG----------------------- 37
+ + +FLI++ +L + R + M + + +
Sbjct: 67 VPVLAVFLILNGIVMLRREGRSLANMLSLLAGLAMVAGPLSLALLHSAAPNLGVLTGTMA 126
Query: 38 --WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
G + +L +Y S ++ +V+LG+G P + +
Sbjct: 127 VLVGYFGFVFASYL--AYSLIYSSLPPRRRPEYVVVLGSGLAGNAVPPLL--------AA 176
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + LY K +I SGG E L E G+ I +E ++
Sbjct: 177 RLDAAVSLY-RGKHGGTIRALIPSGGRGADELTTEGAAMARYLQEQGIPAASILIEDKAT 235
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T +N FS +++ + + +V+S+YH+ R+ ++ + G+ + +
Sbjct: 236 TTLENLVFSRNLMD-RPDRPVTVVTSSYHVFRAAMFTRRAGMRAHVTGA----------- 283
Query: 216 LSANFYLTELALKEYIGILI-AYY 238
+A +++ L+E+I IL+ +
Sbjct: 284 RTAGYFMPSAFLREFIAILVKYKW 307
>gi|256843931|ref|ZP_05549418.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256849507|ref|ZP_05554939.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|293381368|ref|ZP_06627369.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|312983993|ref|ZP_07791342.1| putative membrane protein [Lactobacillus crispatus CTV-05]
gi|256613836|gb|EEU19038.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256713623|gb|EEU28612.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|290922058|gb|EFD99059.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|310894670|gb|EFQ43743.1| putative membrane protein [Lactobacillus crispatus CTV-05]
Length = 343
Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 91/234 (38%), Gaps = 33/234 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ ++FL + S K ++ ++++ + +++ L
Sbjct: 118 IIFFLFLYPLVGRISHDSWLKYPYIFLWLVIIYLVTI-----MMMYTLTSWINLINWH-- 170
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV+LG G P + +RI + +Y +I+SGG
Sbjct: 171 -MPHLDYIVVLGAGIMGTKVTPLL--------AARISRGIEIYHKNP----GSKLIMSGG 217
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E++ + G+ ++DI +E +S T QN QFS +++K +V+S
Sbjct: 218 QGPGEDIPEAVAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTS 275
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+YH+ R+ + + G+ + + ++ ++E+I L+
Sbjct: 276 SYHVYRALVLAKRQGLKCTGYGA-----------KTKWYFTLNAFVREFIAYLV 318
>gi|54023435|ref|YP_117677.1| hypothetical protein nfa14680 [Nocardia farcinica IFM 10152]
gi|54014943|dbj|BAD56313.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 231
Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 70/219 (31%), Gaps = 27/219 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R I +L S + G + + + + IV+LG
Sbjct: 28 RWIRRTVAAAVLMSMVLVGGTAVRVWQ---------VARIDDYTPADAIVVLGAA----- 73
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + L+++ +I GG + E+ L
Sbjct: 74 ---QYSGTPSSVFEARLDQAYDLFRAGVA----PRVITVGGKQEGDLYTEAASGKIYLEG 126
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV + I DT ++ + + +K + + +LVS +H R++ + G+
Sbjct: 127 RGVPTEAILAVETGSDTLRSVEAVALAMKAREMSSAVLVSDPWHSLRTRTMARDAGLRAW 186
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + A Y+ + +E +L
Sbjct: 187 TAPTRTGPAVYTRESQAHGIA------RETFALLWYQLT 219
>gi|168186754|ref|ZP_02621389.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
gi|169295259|gb|EDS77392.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
Length = 253
Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 79/208 (37%), Gaps = 30/208 (14%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L I GI I+L+ L + I++LG
Sbjct: 64 FVLKVCISLGIASFIILESL----IIYSGISNKNPKSDYIIVLGAAVHGD--------YM 111
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S R+ ++ + +I+SGG + E+ L+E+GV+ I
Sbjct: 112 SLILKERVDRSLEYLREYPST----KVIVSGGKGPGEFITEAEAMKRYLVENGVKNSQII 167
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNI---ILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
E S T +N ++SS +I+NM + +V++ +H+ R+++ + G+ +
Sbjct: 168 KEENSRTTAENFKYSSKIIENMDKERTPTVSVVTTNFHMLRAKMLAKRSGLKVNGIPA-- 225
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGIL 234
I + N+Y ++EY +
Sbjct: 226 ----RGHISSAPNYY-----IREYFAFI 244
>gi|262375317|ref|ZP_06068550.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309571|gb|EEY90701.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 379
Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 22/192 (11%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ +P S Q IV+LG G T+ I + + + R+ T+ + +
Sbjct: 201 EQQQAKPANSSQPY----AIVVLGGGLTLDDQGKEIIV--NNYTRLRLETTLAV-----E 249
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
I++SG E+ L GV+ LE +S++T +N +FSS +++
Sbjct: 250 KHYQLPIVLSG--------VEAPYMQRWLKNHGVDAK--LLEDRSMNTCENTRFSSLLLQ 299
Query: 170 NMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
G +IL++ YH+ R++ F GI T + P + N+ + A
Sbjct: 300 KKGGAPTVILITDRYHMPRTRRLFALNGIQTIPVEAPMPTPLTRWRPSAQNYDHSRRANY 359
Query: 229 EYIGILIAYYRG 240
E + + + G
Sbjct: 360 EMLATMRDMWFG 371
>gi|257064629|ref|YP_003144301.1| hypothetical protein Shel_19360 [Slackia heliotrinireducens DSM
20476]
gi|256792282|gb|ACV22952.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
20476]
Length = 246
Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 83/250 (33%), Gaps = 44/250 (17%)
Query: 3 LSWIFLIVSYWHLLCQS----------IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS 52
++ + + +LC R + + G+ + L
Sbjct: 28 FFAVWYAIGFALILCGWGVHAGAFDALPRFAHISIAGLSVVLIAGFLVAAGCSLSG---- 83
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ D + IV+LG +R+ R+ +
Sbjct: 84 -----FDEHGEPDLDCIVVLGAQMKADGPSIVLRL--------RLDAAYDYLVENPETVC 130
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I+SGG + E+ + L+E G++ I E S +T +N + SS+
Sbjct: 131 ----IVSGGQGPNEPITEADGMADYLIERGIDESRIIRENTSTNTVENIRNSSAFFDAEH 186
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ +V++ +H+ RS Q G+ N +D S +YL L+E +
Sbjct: 187 DRV-GIVTNNFHVFRSVRIAQAQGVQNVCGISAD-----------SVAWYLPNNILRESM 234
Query: 232 GILIAYYRGN 241
GI +GN
Sbjct: 235 GIAKDLLKGN 244
>gi|159901379|ref|YP_001547626.1| hypothetical protein Haur_4868 [Herpetosiphon aurantiacus ATCC
23779]
gi|159894418|gb|ABX07498.1| protein of unknown function DUF218 [Herpetosiphon aurantiacus ATCC
23779]
Length = 202
Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 28/222 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q +R+ L + + + I+ + Q + RP+ + +++LG
Sbjct: 6 KQWLRRSIRGLLASLCLAAVIFISTGYIVYRQAQRAELRPV---------DALLVLGAA- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
EPS +R+ E +RLY+ II+SGG +E+ V +
Sbjct: 56 -------QWDGEPSPVLEARLTEAIRLYRLGYAR----RIIVSGGTGLNDTRSEASVAYD 104
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E ++ I Q DT ++ Q ++++V+ HL R+ +G
Sbjct: 105 YLIEHSIDPTLIISVAQGSDTRSTLLAVHDEMQRQQIDSLLIVTDPPHLLRALKMAHDYG 164
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I + + + + N+ + +E + L
Sbjct: 165 ITSFGAPVKANSP-------TTNWASIKATSREALAYLAYVL 199
>gi|253681527|ref|ZP_04862324.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
gi|253561239|gb|EES90691.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
Length = 255
Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 89/239 (37%), Gaps = 33/239 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFML----LFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ W+ L +S + + F + + F + + ++
Sbjct: 34 IIWLLLGISIIVFQRFKDKILKFYKKINIKVKRVIMFFMCIGLSSFIII---EGIIIYAG 90
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P+ + I++LG S R+ T+ K + II+
Sbjct: 91 IPKPADEKKYIIVLGAAVHGD--------YMSLILKKRMDATLDYLKKYP----NTKIIV 138
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKN 175
SGG + E+ L+++GV + I E +S T +N ++S ++K +
Sbjct: 139 SGGKGPGELITEAEAMKRYLVKNGVNNNQIIKEEKSRSTGENFKYSLEILKQREKENIPS 198
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ +V++ +H+ R++ + GIN A S + + N+Y L+EY ++
Sbjct: 199 VCVVTTDFHMFRAEFLAKRIGINVCAVPSK------GYLSSAPNYY-----LREYFAVI 246
>gi|228991869|ref|ZP_04151805.1| hypothetical protein bpmyx0001_26140 [Bacillus pseudomycoides DSM
12442]
gi|228997985|ref|ZP_04157586.1| hypothetical protein bmyco0003_25540 [Bacillus mycoides Rock3-17]
gi|229005536|ref|ZP_04163248.1| hypothetical protein bmyco0002_24730 [Bacillus mycoides Rock1-4]
gi|228755723|gb|EEM05056.1| hypothetical protein bmyco0002_24730 [Bacillus mycoides Rock1-4]
gi|228761718|gb|EEM10663.1| hypothetical protein bmyco0003_25540 [Bacillus mycoides Rock3-17]
gi|228767598|gb|EEM16225.1| hypothetical protein bpmyx0001_26140 [Bacillus pseudomycoides DSM
12442]
Length = 218
Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 82/222 (36%), Gaps = 29/222 (13%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +K + F+L+ S I + + ++ + D + ++LG +
Sbjct: 13 NKKSKKRRVLQVFLLMVSSI-ILFVSYAAYDIWSYRFKTDEV------DTDAAIVLGAAS 65
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + E+
Sbjct: 66 WNGK--------PSPVFRERINHAISLYKNG----SIKKIIFTGGTKFEAEQEEARTAKA 113
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ V+ +DI +ETQS T N + + + + +VS H+KR+ +H G
Sbjct: 114 YALKHNVKDEDILIETQSRFTEDNLKNAKQVGIDNGLHTYTIVSDPLHMKRAMRIAKHIG 173
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKE---YIGILI 235
I+ AS + + Y + KE YIG +
Sbjct: 174 IDAYASPT--PTSAYKTLDT-----EIPFFFKELCSYIGYVA 208
>gi|28898031|ref|NP_797636.1| SanA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153839279|ref|ZP_01991946.1| SanA protein [Vibrio parahaemolyticus AQ3810]
gi|28806245|dbj|BAC59520.1| SanA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149747214|gb|EDM58202.1| SanA protein [Vibrio parahaemolyticus AQ3810]
Length = 244
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 74/234 (31%), Gaps = 27/234 (11%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+F + L S ++I + L + I + + +
Sbjct: 1 MLFSRIRSKWKLKCSWKRIALILSISLFGLLLSVVAIDRWVALQAKD---NIFIDYDQIP 57
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ V+LG I T + RI + LYK K + GD
Sbjct: 58 QHEVAVVLGTSKYIGKT-------LNTYYTHRINAAIELYKQGKVKQFLLS-----GDNA 105
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E LL++GV + I L+ T + + + + + ++V+ +H
Sbjct: 106 HRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFH 162
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+R+ + I+ + A N T + ++E + + A+
Sbjct: 163 CERALFIADAYNIDAQCLAVAGPTA---------NKQKTSMRIRELLARVKAFL 207
>gi|226360352|ref|YP_002778130.1| hypothetical protein ROP_09380 [Rhodococcus opacus B4]
gi|226238837|dbj|BAH49185.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 230
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 60/180 (33%), Gaps = 18/180 (10%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ IV+LG PS +R+ + +LY+ +I
Sbjct: 57 IDDTSTADAIVVLGAA--------QYSGTPSSVFEARLEQAYKLYERGVAPE----VITV 104
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG + E+ N L+ GV D I + DT + + S + + +LV
Sbjct: 105 GGKQEGDEYTEAASGKNYLISRGVPADSITAVEEGSDTLLSIEAVSEAMGAQGIDSAVLV 164
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S +H R++ + G++ + + A ++ +E ++
Sbjct: 165 SDPWHSLRTRTMARDAGLDAWTAPTRQGPAVFTRESQLHGIA------RETGALIWYQLT 218
>gi|329934704|ref|ZP_08284745.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329305526|gb|EGG49382.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 254
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 16/171 (9%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ +G ++ L + L +P ++ V+ G G EPS
Sbjct: 45 AVMGLCVLALSPAAWLFTTTGGQLRTPDTVPRTDVAVVFGAGLW--------DGEPSPYL 96
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ LY + + +++ GD + E L E GV D + +
Sbjct: 97 AHRLDTAAGLYHAGR-----VRVVLVTGDNSRDDYDEPDAMRAYLTEHGVPGDRVVEDYA 151
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DT+ + + + +L+S +H++R+ + G+ + +
Sbjct: 152 GFDTWDSCVRARKIFG---VDRAVLISQGFHIRRAVALCRAAGVESYGVAA 199
>gi|260101969|ref|ZP_05752206.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260084229|gb|EEW68349.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 309
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/235 (14%), Positives = 89/235 (37%), Gaps = 28/235 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + + + +++ ++ + ++ +++ L L
Sbjct: 78 LAMGIVIIFFLFFYPQLGKFSHDSWLVYPYGFLWLVIIYLVTIMMMYTL---TAWINLIN 134
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G P + +RI + +Y+ +I+SG
Sbjct: 135 WYVPHLDYVVVLGAGIMGKTVTPLL--------AARITRGIEIYQKNP----GSKLIMSG 182
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ + G+ ++DI +E +S T +N +FS +++K +V+
Sbjct: 183 GQGPGEDILEAEAMAEYAINLGIPKEDIIIENKSRTTNENLRFSYALMKPN--SKFCIVT 240
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++YH+ R+ + + G+ + + ++ ++E+I L+
Sbjct: 241 NSYHVYRALVLAKRQGLQCIGYGA-----------KTKWYFTLNAFVREFIAYLV 284
>gi|149184051|ref|ZP_01862406.1| hypothetical protein BSG1_09543 [Bacillus sp. SG-1]
gi|148848239|gb|EDL62534.1| hypothetical protein BSG1_09543 [Bacillus sp. SG-1]
Length = 245
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/241 (18%), Positives = 91/241 (37%), Gaps = 34/241 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L FL +SY + + R I + + + + +LL + +
Sbjct: 37 LFFAAFLYLSYPLIEKRIWRHIHRALLIGYVLFLMSFTAVQVLLLMEMGS---------E 87
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D I++LG G E S +R+ + + + +I+SGG
Sbjct: 88 APDDIQQIIILGAGLKGE--------EISQTLETRLEAGVEYLRKNPE----IPVIVSGG 135
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILV 179
+ + ES + L+ G+ + I E +S TF+N S +++ + I+++
Sbjct: 136 QGEGEDIPESTAMSRYLVSHGISSNRITEEDRSTTTFENLLNSKRILERKGAEDDRILII 195
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+S YH+ R++L + G++ + S F ++EY ++ A
Sbjct: 196 TSDYHVFRAKLTGKKIGLDCSGLGGE-----------SGFFIKINYMIREYFAVVKAVVI 244
Query: 240 G 240
G
Sbjct: 245 G 245
>gi|313206619|ref|YP_004045796.1| hypothetical protein Riean_1129 [Riemerella anatipestifer DSM
15868]
gi|312445935|gb|ADQ82290.1| protein of unknown function DUF218 [Riemerella anatipestifer DSM
15868]
gi|315022113|gb|EFT35142.1| hypothetical protein RAYM_06447 [Riemerella anatipestifer RA-YM]
gi|325335940|gb|ADZ12214.1| Uncharacterized membrane protein [Riemerella anatipestifer RA-GD]
Length = 213
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 71/218 (32%), Gaps = 26/218 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + K ++C + +FS + + ++K SY +S K G
Sbjct: 2 KKLGKALLVTCVLSIFSVVTVILWCNYIIKSQSESYIFSNISEVPTKKV--------GLV 53
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ + P+ RI LYK+ K I GD + E+
Sbjct: 54 LGTSKYLQNGIPNCYFKYRIDAAAELYKNGKVQY-----FIVSGDNSRKDYNETEDMKLD 108
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ G+ + I + T + + + I++S +H +R+ + G+
Sbjct: 109 LMAHGIPENHIYQDFAGFRTLDSVIRAEDIFGQKTF---IIISQKFHNERAVYLARKNGL 165
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +N + + ++EY +
Sbjct: 166 EAYGYNAQDVN----------AYAGLKTQVREYFARVK 193
>gi|328883409|emb|CCA56648.1| hypothetical protein SVEN_3362 [Streptomyces venezuelae ATCC 10712]
Length = 340
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 93/237 (39%), Gaps = 30/237 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + ++ +L +S + +L+ ++ + + + Y + ++D
Sbjct: 107 VVMGLAVAAVLTRSPVLGTIVGTTLLVLGYVSFLFLCFV-------GYAFLYGRLRLRRD 159
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS----CKQHSMHCTIIISGG 121
+V+LG+G S SR+ +Y+ ++ +I SGG
Sbjct: 160 AAYVVVLGSGLIGGR-------RVSPLLASRLDRGREVYEKLAARKRRDGTAPLLITSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVS 180
L ES + L+ G D + E +S T +N FS +++ + G ++V+
Sbjct: 213 QGPDETLPESHAMADYLVARGFPPDALVREDRSRTTEENLLFSKELMERDRPGSACVIVT 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +H R+ + + G++ + S +A ++ ++E++ + + Y
Sbjct: 273 NNFHAFRAAILARRAGVDGQVVGS-----------PTAAYFWPSATMREFVAVFLQY 318
>gi|254555567|ref|YP_003061984.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|254044494|gb|ACT61287.1| integral membrane protein [Lactobacillus plantarum JDM1]
Length = 340
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 102/238 (42%), Gaps = 29/238 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIF-FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ I LI+S +L R+++ F+ +LL ++ + +L
Sbjct: 106 VLVIMLILSVINLGVWHSRRLWQFLGLALLLTAYFAFSFFAYLL--------ACVTTRLG 157
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ-HSMHCTIIISG 120
+ + +++LG G +P+ R+ + Y++ + + TI++SG
Sbjct: 158 RHRQIDYMIVLGAGLMPN-------GQPTRTLAYRLQAAAKYYRAQRARYHQPITIVVSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILV 179
G +AES L++ GV RD I+ E QS T +N +FS ++I + ++V
Sbjct: 211 GQGPDEVMAESTAMRQYLVDQGVPRDAIQEENQSTSTIENLKFSHALIVRQQPFYRAVIV 270
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+S YH+ R+ ++ + +N + + +P + +EY+ +++ Y
Sbjct: 271 TSGYHVLRANIFARQLHLNLTGIGA---HTPLYYLPFA--------MFREYLALIVMY 317
>gi|152975811|ref|YP_001375328.1| hypothetical protein Bcer98_2067 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024563|gb|ABS22333.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 209
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 19/188 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +K + F+L+ S + + + ++ K D + V+LG
Sbjct: 4 KKKSKKRRVLQVFLLMISSM-ILFVSYAAYDIWSYRFKT------DKVDTDAAVVLGAAA 56
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LY++ II +GG + L E+
Sbjct: 57 WNGK--------PSPVFRERINHAISLYQNG----NIKKIIFTGGTKFEAELEEARTAKA 104
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ V+ +DI +ET+S T N + + + + +VS H+KR+ +H G
Sbjct: 105 YALKRNVKDEDILIETKSRFTEDNLKNAKQVGMEHGLQTYTIVSDPLHMKRAMQIAKHIG 164
Query: 197 INTKASCS 204
++ AS +
Sbjct: 165 MDAYASPT 172
>gi|56476708|ref|YP_158297.1| hypothetical protein ebA2301 [Aromatoleum aromaticum EbN1]
gi|56312751|emb|CAI07396.1| probable transmembrane protein [Aromatoleum aromaticum EbN1]
Length = 258
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 17/207 (8%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
W +L L+ P L+ + IV++G G + + R+
Sbjct: 61 WPATVGWMLAGLETD---PPLTATSARPAEAIVIVGGGKRRHAPEYGGE-TVNRLTLERL 116
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
RL + +++SGG P ++ + G+ +E SLDT
Sbjct: 117 RYGARLAH-----GLRLPVLVSGGAPTGERPEGELMKAALETDFGIIPR--WVEASSLDT 169
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS------DYLNAYY 211
QNA+FS+ ++K + ++LV+ A H++R++ F+ GI A+ + D +
Sbjct: 170 GQNAEFSAPLLKAAGVRRVLLVTHAAHMRRARAEFEARGIEVIAAPTAWLGRHDANDQVL 229
Query: 212 SIIPLSANFYLTELALKEYIGILIAYY 238
+ +P + + Y A E++G+L
Sbjct: 230 TALPSATSAYAGWYAAHEWLGLLALRL 256
>gi|261209456|ref|ZP_05923819.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289567586|ref|ZP_06447918.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
gi|260076584|gb|EEW64348.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289160620|gb|EFD08588.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
Length = 349
Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 127 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 177
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y++ + +++ I++ G + E+I
Sbjct: 178 LINGET-------VSPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 230
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ S+ YH+ R+ LY
Sbjct: 231 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 290
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EY+ IL
Sbjct: 291 RQAKLKANGIGA-----------KTAFYYLPNAFLREYLAIL 321
>gi|111221457|ref|YP_712251.1| hypothetical protein FRAAL2020 [Frankia alni ACN14a]
gi|111148989|emb|CAJ60669.1| hypothetical protein FRAAL2020 [Frankia alni ACN14a]
Length = 228
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 58/178 (32%), Gaps = 18/178 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG PS +R+ + LY+ + +I G
Sbjct: 55 DHRPTSDTLVVLGA--------SQYDGRPSAVFAARLDHALELYRQGVAPN----VITIG 102
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ L GV D + + + DT + + ++ ++ +LV+
Sbjct: 103 GKQPGDRYTEAEAGAAYLRRRGVPADRVIVVPEGSDTLGSLTAVAGVMNTRHWRSTVLVT 162
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H RS+ + G++ S A + ++E IG
Sbjct: 163 DPPHSLRSRTMARDLGLDATTSPVTRGPAVHGFD------TKVRYIIREGIGYRWYQL 214
>gi|167754637|ref|ZP_02426764.1| hypothetical protein CLORAM_00139 [Clostridium ramosum DSM 1402]
gi|167705469|gb|EDS20048.1| hypothetical protein CLORAM_00139 [Clostridium ramosum DSM 1402]
Length = 209
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 27/179 (15%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
++ ++ K + +++LG P +R R+ + ++ I
Sbjct: 47 EVNNKYNKRSDFLIVLGARLYGDKPAPLLRY--------RLDAAVEYHQKFP----DVPI 94
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGK 174
I+SGG + E+ + L+ G++ I E +S +T +N +S +I+ +
Sbjct: 95 IVSGGQGHGENITEAKAMKDYLINKGIDESLIIEENKSTNTNENIIYSKKIIETSPTEDY 154
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY-LTELALKEYIG 232
++++++ +H RS+L G+ + N L+E+ G
Sbjct: 155 EVVIITNGFHCYRSKLLANKHGLEAHTYAA------------RENLDTAPHYYLREFFG 201
>gi|282861775|ref|ZP_06270839.1| protein of unknown function DUF218 [Streptomyces sp. ACTE]
gi|282563591|gb|EFB69129.1| protein of unknown function DUF218 [Streptomyces sp. ACTE]
Length = 245
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 54/167 (32%), Gaps = 16/167 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ V+ G G + PS R+ LY+S K +++
Sbjct: 62 ADAPARQVAVVFGAGLW--------QGRPSPYLAHRLDAAAELYRSGK-----VKVLLVT 108
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD + E L GV I + DT+ + + + +LVS
Sbjct: 109 GDNSRVEYDEPDAMRTYLTAHGVPDGRIVSDYAGFDTWDSCVRAKKIFG---VDRAVLVS 165
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+H++R+ + GI+ D ++ + + AL
Sbjct: 166 QGFHIRRAVALCRSAGIDAYGVGVDAVHDATWYYGGAREVFAAGKAL 212
>gi|229085827|ref|ZP_04218054.1| hypothetical protein bcere0022_24320 [Bacillus cereus Rock3-44]
gi|228697494|gb|EEL50252.1| hypothetical protein bcere0022_24320 [Bacillus cereus Rock3-44]
Length = 209
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 82/222 (36%), Gaps = 29/222 (13%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +K + F+L+ S I + + ++ + D + ++LG +
Sbjct: 4 NKKSKKRRILQVFLLMISSI-ILFVSYAAYDIWSYRFKTDEV------DTDAAIVLGAAS 56
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + E+
Sbjct: 57 WNGK--------PSPVFRERINHAISLYKNG----SIKKIIFTGGTKFEAEQEEARTAKA 104
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ V+ +DI +ETQS T N + + + + + +VS H+KR+ +H G
Sbjct: 105 YALKHDVKDEDILIETQSRFTEDNLKNAKQVGMDNGLQTYTIVSDPLHMKRAMKIAKHIG 164
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKE---YIGILI 235
+ +S + + Y + KE YIG +
Sbjct: 165 MEAYSSPT--PTSAYKTLDT-----EIPFFFKELCSYIGYVA 199
>gi|297559450|ref|YP_003678424.1| hypothetical protein Ndas_0471 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843898|gb|ADH65918.1| protein of unknown function DUF218 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 216
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 54/175 (30%), Gaps = 20/175 (11%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+ G +L P+ + ++LG G
Sbjct: 2 LAVFAMVAGCVPF-LWVLSSTSDHRHTAASVPERP----VALVLGAGVRPD-------GR 49
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS R+ LY + K +++ GD E+ L+++GV + I
Sbjct: 50 PSLLLARRLDTAADLYFAGKVD-----VVLVTGDNSVEHYNETDTMRAYLVDAGVPGEHI 104
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ T+ + + + + +V+ +HL R+ + GI+
Sbjct: 105 VGDYAGFSTWDSCVRAHEVFGVREVT---VVTQDFHLPRAVRLCRSAGIDAVGVA 156
>gi|257867722|ref|ZP_05647375.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257874049|ref|ZP_05653702.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257801805|gb|EEV30708.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257808213|gb|EEV37035.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
Length = 356
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 96/242 (39%), Gaps = 34/242 (14%)
Query: 1 MLLSWIFLIVSY----WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
++L+ + ++ + H IR +F + LL+ F+ + L + + + P
Sbjct: 114 LILAVVLTVLLFSDTLLHFFPDWIRTLFGIVPLSLLYLFVVFL---NFLSISVIYQFNHP 170
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCT 115
+ + + I++LG G T S RI + Y+ K
Sbjct: 171 ------RYNQDFIIVLGAGLLNGTT-------VSPLLAKRINTAISFYESQFKAKKTAPR 217
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+++SGG L E++ + GV +I +ET S T++N +FS ++ +++
Sbjct: 218 LLMSGGQGSDEQLPEAVAMKEYAIAQGVPEGEILVETNSTTTYENMKFSKEIMDSLKPNG 277
Query: 176 II--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ LY + + +A +YL L+E++ I
Sbjct: 278 YKAIFASNNYHIFRAGLYADQAQLKADGIGA-----------PTAFYYLPNAFLREFVAI 326
Query: 234 LI 235
L
Sbjct: 327 LF 328
>gi|310818213|ref|YP_003950571.1| hypothetical protein STAUR_0940 [Stigmatella aurantiaca DW4/3-1]
gi|309391285|gb|ADO68744.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 254
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 75/226 (33%), Gaps = 23/226 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LS +FL + +L +R+ LL L + +Q Y +L Q
Sbjct: 35 PLSTVFLAMGRRGVLGVWMRRGVLAGALSLLGVLA--------LSRFVQVRYADRILPRQ 86
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + ++ G G PS R+ + L++ K ++ G
Sbjct: 87 GAPEAPMALVFGAGLAPG-------GVPSPVLAQRLDTAIALWREKKVGG-----VLVSG 134
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D E+ LLE G+ ++ + L T+ + + + + +LV+
Sbjct: 135 DNSDRFHDETRAMRRYLLERGLPETAVQGDNSGLSTYDSCVRAYDVFGMRR---ALLVTQ 191
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+HL R+ G++ +D + L F +
Sbjct: 192 RFHLPRALYIANSVGMDAWGVAADEGHPSTQRYVLRETFSRVLALI 237
>gi|241888952|ref|ZP_04776256.1| integral membrane protein [Gemella haemolysans ATCC 10379]
gi|241864201|gb|EER68579.1| integral membrane protein [Gemella haemolysans ATCC 10379]
Length = 345
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/235 (19%), Positives = 92/235 (39%), Gaps = 25/235 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ F +V Y+ + + L+S++G ++ + + +
Sbjct: 105 LATFFFLVGYFIYWPRVADYTYGNLILSALYSYVGLVVLYFLCIAMSYLVSSVLNIINIL 164
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +V+LG G P + SRI + + +YK+ +I+SGG
Sbjct: 165 PRRIDYVVVLGAGLIGERVTPLL--------ASRIRKGINVYKANP----GSKLIMSGGQ 212
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ N E GV+ +DI LE +S T +N FS I K+ +V++
Sbjct: 213 GPDEVVSEAFAMKNYAFEQGVDENDIILEDKSTSTEENIIFSKKFIPA--DKSFAVVTNY 270
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
YH+ R+ + + G + + ++ ++E+IG L
Sbjct: 271 YHVYRALVQARTLGFRCIGYGA-----------PTKFYFTLNAFIREFIGYLYFK 314
>gi|320010937|gb|ADW05787.1| protein of unknown function DUF218 [Streptomyces flavogriseus ATCC
33331]
Length = 253
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 61/197 (30%), Gaps = 16/197 (8%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+ + + + L + + + + V+ G G PS
Sbjct: 39 LVQALMVACAVALAPATWLHTTADARVRTTAGAPAQEVAVVFGAGLW--------EGRPS 90
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ LY++ K +++ GD + E L GV I
Sbjct: 91 PYLARRLDAAAELYRTGK-----VRVVLVTGDNSRVEYDEPDAMRTYLTAQGVPDGRIVS 145
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+ DT+ + + + +LVS +H++R+ + GI+ D ++
Sbjct: 146 DHAGFDTWDSCVRARKVFG---VDRAVLVSQGFHIRRAIALCRSAGIDAYGVGVDDVHDV 202
Query: 211 YSIIPLSANFYLTELAL 227
+ AL
Sbjct: 203 TWYYGGTREVLAAGKAL 219
>gi|297559723|ref|YP_003678697.1| hypothetical protein Ndas_0746 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844171|gb|ADH66191.1| protein of unknown function DUF218 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 370
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 67/212 (31%), Gaps = 25/212 (11%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
LL + T + + + IV+LG
Sbjct: 172 WLVSLLLVTALAVPVGTWAW-------VWYVARQDERTPSDAIVVLGA--------SQYN 216
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + LY I+ GG E+ N L+E GV D
Sbjct: 217 GVPSPVFEARLRQAQVLYLEGVAPV----IVTVGGKLPGDNFTEAASGRNWLIEVGVPGD 272
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ + DT Q+ + + + + ILVS +H RS+ GI S S
Sbjct: 273 QVIAVEEGSDTLQSIEAVAGVFEANSWDTAILVSDPWHSLRSERMAAAHGIEAGTSPS-- 330
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ I + +Y+T +E + +
Sbjct: 331 RSGPAVIERRTQLWYIT----RETAALWYYWI 358
>gi|221195587|ref|ZP_03568642.1| integral membrane protein [Atopobium rimae ATCC 49626]
gi|221184774|gb|EEE17166.1| integral membrane protein [Atopobium rimae ATCC 49626]
Length = 346
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 85/241 (35%), Gaps = 29/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ ++ I + + + + F+ L F W + L Y
Sbjct: 110 LPIALALFIFLMYCIPIYASQDGLFLEVLPLFFFEGLWFSFTFVALLF----YSWLYRIL 165
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++ G G P + RI + L+ K+ + SG
Sbjct: 166 PRHRRYDYIIIHGAGLDGEKPTPLL--------AGRINRALELW---KRQDCCGKFVASG 214
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK---NMQGKNII 177
G + E+ L+E GV ++ I +E +S T++N ++S ++ Q
Sbjct: 215 GQGDDEVVTEAQAMRGYLMEHGVSQETILMEDRSRTTWENLKYSQMLMNADAQYQDYTAA 274
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+V+S +H+ R Y + G+ S + +Y ++E+ I A+
Sbjct: 275 MVTSDFHVFRCAEYAHNLGLKADGVGS-----------HTGGWYWPTAFIREFAAITKAH 323
Query: 238 Y 238
+
Sbjct: 324 F 324
>gi|281354956|ref|ZP_06241450.1| protein of unknown function DUF218 [Victivallis vadensis ATCC
BAA-548]
gi|281317836|gb|EFB01856.1| protein of unknown function DUF218 [Victivallis vadensis ATCC
BAA-548]
Length = 260
Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 84/228 (36%), Gaps = 15/228 (6%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
C+ KI ++ L GI + + L Y + ++ +V+ G+G
Sbjct: 38 RCRKWGKILLVAAIALFLVA---GIFGQVFRETLTGRYPPLDPALLPPEEYT-LVVAGSG 93
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ P + A + + R+ E R+ + ++ + C+I +
Sbjct: 94 FSGAPGL-APELRFNDAMRIRLHEAGRIAAALRKRGIGCSIAAGIHPSDGQWELKHRALA 152
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
G+ + + + ++ Q S + IL+S AYHL R L + +
Sbjct: 153 AFFAPYGIAPERLIPIEGAANSRQEVIAFSQLPG-----CKILISEAYHLPRLMLLARKY 207
Query: 196 GINTKASCSD-----YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ + + + + +P + +F TE + EY+GI A+
Sbjct: 208 RLDAIPAPAGNIEGPFGGSPLDFLPNAESFAHTERTVYEYLGIAEAFL 255
>gi|297626919|ref|YP_003688682.1| hypothetical protein PFREUD_17520 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922684|emb|CBL57261.1| Hypothetical protein PFREUD_17520 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 354
Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 19/217 (8%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
++ L +FIG + +++ QF + + D +++++LG+G
Sbjct: 131 RWWSMALFTLVTFIGTYLGTFLVVMLAQFVVRALFGGRRRVPDPDVLIVLGSGLINGKVP 190
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P + SR+ +++ ++SGG AE+ L G
Sbjct: 191 PLL--------ASRLDRALQVSAEEALQGRRPMFVVSGGRGSDEPRAEAEAMAEYLTSRG 242
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL-VSSAYHLKRSQLYFQHFGINTKA 201
V + I +E +S T +N S+ +++ +L V+S+YH R+ + ++
Sbjct: 243 VPDERIIVEDRSRSTRENLVNSTRLLRERGIGGPMLAVTSSYHTTRTDVLAADLRLDDVF 302
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +A +Y L+EYIG+L
Sbjct: 303 VTGAH----------TAWYYAPGAYLREYIGVLTYRL 329
>gi|291444403|ref|ZP_06583793.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291347350|gb|EFE74254.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length = 249
Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 62/213 (29%), Gaps = 21/213 (9%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L ++ R + +++ + L+ + + + V+ G
Sbjct: 29 LRLPRTRRGQRRLVQGLMVACVLALVPAT---WMRLEAG--DRVGTTADAPVREVAVVFG 83
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G P+ R+ LY++ K +++ GD + E
Sbjct: 84 AGLWNG--------RPTPYLAHRLDAAAELYRTGK-----VKVVLVTGDNSRVEYDEPDA 130
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L GV + I + D++ + + + +LVS +H+ R+ +
Sbjct: 131 MRTYLTGRGVPDERIVSDYAGFDSWDSCVRAKKIFG---VDRAVLVSQGFHIHRAVTLCR 187
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
GI+ D + A
Sbjct: 188 SAGIDAYGVGVDEPRDSVWYYGGVRELAASGKA 220
>gi|257898082|ref|ZP_05677735.1| conserved hypothetical protein [Enterococcus faecium Com15]
gi|257835994|gb|EEV61068.1| conserved hypothetical protein [Enterococcus faecium Com15]
Length = 368
Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y + + +++ I++ G + E++
Sbjct: 197 LINGET-------VSPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAMAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 310 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 340
>gi|218133156|ref|ZP_03461960.1| hypothetical protein BACPEC_01018 [Bacteroides pectinophilus ATCC
43243]
gi|217992029|gb|EEC58033.1| hypothetical protein BACPEC_01018 [Bacteroides pectinophilus ATCC
43243]
Length = 256
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 89/243 (36%), Gaps = 25/243 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFS----FIGWGIIPTILLKHLQFSYQRPLL 58
++I+L +S + I ++ +L F I+ L L+ +
Sbjct: 29 FNYIWLAISLFFGFVFYISRMEACGRIVLHVWTKTAFTVVMILGFGYLAVLEGLVISK-M 87
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + + +++LG S R+ +C + CTII+
Sbjct: 88 NAKPDGGCDYMIVLGAHVKGD--------VVSKSLAQRLDTAYE--YACSEDGKECTIIV 137
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+GG + + E+ L E G+ D I +E +S DT N + S + + ++++
Sbjct: 138 AGGKGKGESVTEAFAMKRYLTEKGINPDRILMEDKSTDTQLNIKLSRELYIDDTASDVVI 197
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SS++H+ R+ G+N + S L L+E +GI
Sbjct: 198 ASSSFHIFRALKLANAQGLN----------NVQGLAAPSNKILLVNYMLREAVGITKEIV 247
Query: 239 RGN 241
GN
Sbjct: 248 FGN 250
>gi|110834807|ref|YP_693666.1| hypothetical protein ABO_1946 [Alcanivorax borkumensis SK2]
gi|110647918|emb|CAL17394.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 203
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 78/215 (36%), Gaps = 22/215 (10%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
+L+ + S+ PL +V+LG G R
Sbjct: 6 LALLVLVGASLPAVV--------RSFLPPLPRRITGITPQAVVVLGAGRRQRK----GRS 53
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ---KHGLAESIVYNNKLLESGVE 144
+ + R+ L +++SGG E+ + + L
Sbjct: 54 SLNTRGLRRLKLAAELAHEH-----GLPLLVSGGGQPPKHDDEPTEADLMAEQALRRW-P 107
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
R D+ E +S +T++NA +SS ++ + ++LVS HL R+ L FQ G+ +A+ S
Sbjct: 108 RLDVIKEFRSRNTWENACYSSELLADRGIDEVLLVSDRAHLPRALLCFQSQGVLAQAAWS 167
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+P + + E++ ++ + R
Sbjct: 168 K-RLPKQEWLPSAGAISMVPEIWYEWLALVWYHAR 201
>gi|293559773|ref|ZP_06676293.1| integral membrane protein [Enterococcus faecium E1162]
gi|314950188|ref|ZP_07853473.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0082]
gi|291606256|gb|EFF35670.1| integral membrane protein [Enterococcus faecium E1162]
gi|313643498|gb|EFS08078.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0082]
Length = 399
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y + + +++ I++ G + E++
Sbjct: 228 LINGET-------VSPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAMAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 371
>gi|227890086|ref|ZP_04007891.1| membrane protein [Lactobacillus johnsonii ATCC 33200]
gi|227849530|gb|EEJ59616.1| membrane protein [Lactobacillus johnsonii ATCC 33200]
Length = 346
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 93/238 (39%), Gaps = 33/238 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+++++FL L + ++ +++ I I++ + S+ L
Sbjct: 118 IIAYLFLFPLVGKLTHNNFATYVYLFINLVIIYLI------FIMMMYTLTSWIN--LVNI 169
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + +V+LG G P + +RI + +Y+ II+SGG
Sbjct: 170 KTKKLDYVVVLGAGLMGKKVTPLL--------AARINRGIEVYRRNP----GSKIIMSGG 217
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E++ E G+ + DI +E +S T +N FS ++K +V++
Sbjct: 218 QGPGEEIPEAVAMAKYAEEEGIPKQDIIVEDKSKTTRENLIFSHRLMKP--DSRFAIVTN 275
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+YH+ R+ + + G+ + + ++ ++E+I L +R
Sbjct: 276 SYHVYRALVLAKRLGLQCIGYGA-----------KTKWYFTLNAFVREFIAYLTITWR 322
>gi|254519553|ref|ZP_05131609.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226913302|gb|EEH98503.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length = 257
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 82/190 (43%), Gaps = 26/190 (13%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ K + +++LG G PS R+ +T+ + ++
Sbjct: 84 AIIIFPKNNKNYSDYVIVLGAGVKGEK--------PSLTLMQRLDKTIEYVNNQEKE--- 132
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ- 172
II+SGG + ++E+ L+ +G++ + I +E +S T +N FS ++I++
Sbjct: 133 SKIIVSGGQGRGEDISEAQAMKKYLVNNGIKEELIIMENKSTSTNENLIFSKAIIESYTK 192
Query: 173 ----GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
NI +++S +H RS + + G ++ + ++IP+ + +
Sbjct: 193 SDIGDINIKIITSDFHAFRSNMIAKKLGYRNITFYTN--STLPALIPVMYS--------R 242
Query: 229 EYIGILIAYY 238
E++ ++ +Y
Sbjct: 243 EFLAVIKSYL 252
>gi|239940966|ref|ZP_04692903.1| putative integral membrane protein [Streptomyces roseosporus NRRL
15998]
gi|239987444|ref|ZP_04708108.1| putative integral membrane protein [Streptomyces roseosporus NRRL
11379]
Length = 245
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 62/213 (29%), Gaps = 21/213 (9%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L ++ R + +++ + L+ + + + V+ G
Sbjct: 25 LRLPRTRRGQRRLVQGLMVACVLALVPAT---WMRLEAG--DRVGTTADAPVREVAVVFG 79
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G P+ R+ LY++ K +++ GD + E
Sbjct: 80 AGLWNG--------RPTPYLAHRLDAAAELYRTGK-----VKVVLVTGDNSRVEYDEPDA 126
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L GV + I + D++ + + + +LVS +H+ R+ +
Sbjct: 127 MRTYLTGRGVPDERIVSDYAGFDSWDSCVRAKKIFG---VDRAVLVSQGFHIHRAVTLCR 183
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
GI+ D + A
Sbjct: 184 SAGIDAYGVGVDEPRDSVWYYGGVRELAASGKA 216
>gi|257890483|ref|ZP_05670136.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|257826843|gb|EEV53469.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
Length = 368
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y + + +++ I++ G + E++
Sbjct: 197 LINGET-------VSPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAMAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 310 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 340
>gi|50085083|ref|YP_046593.1| hypothetical protein ACIAD1944 [Acinetobacter sp. ADP1]
gi|49531059|emb|CAG68771.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 384
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I + + + R+ +T+ L + + I++SG
Sbjct: 220 AIVVLGGGLTLADNKKDIVV--NNYTRLRLEKTLEL-----EKKYNLPIVLSG------- 265
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLK 186
E+ L E GV + LE +S++T +N++FSS +++ G ++LV+ YH+
Sbjct: 266 -VEAPYMQTWLKERGV--EAKLLENRSMNTCENSRFSSLLLQKKGGAPTVMLVTDVYHMP 322
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R++ F GI T + + P N+ + A E + + G
Sbjct: 323 RTRRLFALNGIETIPVEAPMPTQLTTWQPSQQNYDHSRRANYELLATIRDMLFG 376
>gi|227524764|ref|ZP_03954813.1| integral membrane protein [Lactobacillus hilgardii ATCC 8290]
gi|227088071|gb|EEI23383.1| integral membrane protein [Lactobacillus hilgardii ATCC 8290]
Length = 351
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 94/264 (35%), Gaps = 47/264 (17%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI---------FFMSCFMLLFSF-----------IGWGI 40
++ S++FL ++ + + R + + + F F
Sbjct: 78 LIFSFVFLFINAYFAWKREGRSLSSSLTLILGIGVILVDIFFLFDPINAPKPIQNFITMF 137
Query: 41 IPTILLKHLQFSYQRPLLSPQ-----WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ + L + + K D + I++LG+G + +
Sbjct: 138 LTLFIFYILLTVWNTMVSMIVYNLYFPKYDKDYIIVLGSGLIDG-------YKVGRLLGN 190
Query: 96 RIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
RI + + Y K+ S H +I SGG + E + L+ GV D +E +S
Sbjct: 191 RINKGIEFYHLQLKKTSKHAKLIFSGGQGGDEKIPEGVAMKKYALDQGVPETDTLVEDKS 250
Query: 155 LDTFQNAQFSSSMIKN---MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
++T QN FS +IKN I+ V++ +H R + GI +
Sbjct: 251 INTRQNLIFSDRIIKNDSGRDDSKIVFVTNNFHTLRGGILAGKLGIPATGIGA------- 303
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
+ +YL ++EY+ + +
Sbjct: 304 ----KTPFYYLPNAVIREYLALFV 323
>gi|295693788|ref|YP_003602398.1| hypothetical protein LCRIS_01926 [Lactobacillus crispatus ST1]
gi|295031894|emb|CBL51373.1| Membrane protein [Lactobacillus crispatus ST1]
Length = 343
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 91/234 (38%), Gaps = 33/234 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ ++FL + S K ++ ++++ + +++ L
Sbjct: 118 IIFFLFLYPLVGRISHDSWLKYPYIFLWLVIIYLVTI-----MMMYTLTSWINLINWH-- 170
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV+LG G P + +RI + +Y +I+SGG
Sbjct: 171 -MPHLDYIVVLGAGIMGTKVTPLL--------AARISRGIEIYHKNP----GSKLIMSGG 217
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E++ + G+ ++DI +E +S T QN QFS +++K +V+S
Sbjct: 218 QGHGDDIPEAVAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTS 275
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+YH+ R+ + + G+ + + ++ ++E+I L+
Sbjct: 276 SYHVYRALVLAKRQGLKCTGYGA-----------KTKWYFTLNAFVREFIAYLV 318
>gi|168183333|ref|ZP_02617997.1| putative sanA protein [Clostridium botulinum Bf]
gi|237793971|ref|YP_002861523.1| putative SanA protein [Clostridium botulinum Ba4 str. 657]
gi|182673423|gb|EDT85384.1| putative sanA protein [Clostridium botulinum Bf]
gi|229261043|gb|ACQ52076.1| putative SanA protein [Clostridium botulinum Ba4 str. 657]
Length = 222
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 79/223 (35%), Gaps = 29/223 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ I++I + + L I ++ Y ++P+ + I++LG
Sbjct: 1 MKNKIKRILMVIIVIALIGTAAIFFI-DFKVRSESKKYI---VNPKDVPEAEAILVLGAY 56
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ R+ + LYK+ K ++ GD + E
Sbjct: 57 VKPN-------GKLCDMLEDRVAVGIDLYKNNKAKK-----LLFSGDHGQVNYDEVNGMK 104
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ GV+++DI L+ T+++ + + K + I+V+ YHL R+ +
Sbjct: 105 KVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKAKKI---IIVTQQYHLMRAVYIARQL 161
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G++ SD N + + + +E + Y+
Sbjct: 162 GLDAYGVNSDQRN----------YWGIAKYKTREIAARVKDYF 194
>gi|29832215|ref|NP_826849.1| integral membrane protein [Streptomyces avermitilis MA-4680]
gi|29609333|dbj|BAC73384.1| putative integral membrane protein [Streptomyces avermitilis
MA-4680]
Length = 230
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 66/212 (31%), Gaps = 21/212 (9%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L ++ ++L + T + L + + + V+ G
Sbjct: 12 RLPRTRAGRRRAVQVVMLGCVLALLP-ATWMFAVAGDR----LRTTEDAPRTEVAVVFGA 66
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G EPS R+ +LY++ + +++ GD + E
Sbjct: 67 GLWAG--------EPSPYLAHRLDAAAKLYRAGRIE-----VVLVTGDNSREDYDEPDAM 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L GV I + DT+ + + + +L+S +H++R+ Q
Sbjct: 114 RTYLTRHGVPDGRIVSDYAGFDTWDSCVRAKKIFGVNH---AVLISQGFHIRRAVALCQA 170
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
G+++ D + + + A
Sbjct: 171 AGVDSYGIGVDAKHDATWYYGGTREIFAAGKA 202
>gi|134100940|ref|YP_001106601.1| hypothetical protein SACE_4407 [Saccharopolyspora erythraea NRRL
2338]
gi|291003446|ref|ZP_06561419.1| hypothetical protein SeryN2_02872 [Saccharopolyspora erythraea NRRL
2338]
gi|133913563|emb|CAM03676.1| hypothetical membrane spanning protein [Saccharopolyspora erythraea
NRRL 2338]
Length = 331
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 90/234 (38%), Gaps = 28/234 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I ++ + + + +++ + +L Y +
Sbjct: 101 LGIIGIVAVKALANITRWLPLQVAVEAVSDVLAYVSLLFVCFLL-------YSFVYGRIR 153
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++D + IV+LG+G P + R+ +++ + ++ SGG
Sbjct: 154 HRRDVDFIVVLGSGLIGSRVPPLL--------AGRLDRARAAFEAEEAKGRRPVLVTSGG 205
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVS 180
L E+ + L+ GV D I +E QS T +N +FS ++++ ++V+
Sbjct: 206 QGPGEDLPEARAMADYLIAQGVPEDRILVEDQSRSTEENLRFSKAIMRERRPDYRCLVVT 265
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++H+ R+ + +N + S +A ++L ++E++ +
Sbjct: 266 NSFHVMRAARIARGEKVNAQVIGS-----------RTARYFLPSATIREFVAVF 308
>gi|62391115|ref|YP_226517.1| hypothetical protein cg2495 [Corynebacterium glutamicum ATCC 13032]
gi|41326454|emb|CAF20616.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length = 200
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 25/187 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+P + + I++LG PS Q +R+ +L++ + +
Sbjct: 4 TPNNRHKIDSILVLG--------TAQYDGVPSRQFAARLRHAAKLWRLHEIQH----VYT 51
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GG E+ V L++ GV+ D I + + S + + +++
Sbjct: 52 VGGKLPGDRFTEAEVAREYLIKEGVDPDLIFVSA----VGNDTVSSYEALDPEKLGRVLI 107
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA-- 236
V+ H R+ + G + K S + Y A P F E+ G+++
Sbjct: 108 VTDPNHSYRAVRIARRMGFDAKPSPTTYSPAK---FPSIVYFLTLS---HEWGGVVVQDV 161
Query: 237 -YYRGNR 242
G R
Sbjct: 162 SRLLGER 168
>gi|325001625|ref|ZP_08122737.1| hypothetical protein PseP1_22816 [Pseudonocardia sp. P1]
Length = 228
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 69/220 (31%), Gaps = 29/220 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ ++L + +G + + ++ + +++LG
Sbjct: 26 WGARLVVGGLVMLIAVVGVTALRVW-----------QVARIDDQRPVDAVIVLGAA---- 70
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
EPS +R+ LY+ I+ GG E+ L+
Sbjct: 71 ----QYNGEPSAVLAARLRHAEDLYRDGVA----PRIVTVGGGQSGDRYTEAEASREWLI 122
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
E G+ ++ + +DT + Q + + ++ +LVS +H R++ + G+
Sbjct: 123 EQGLPSTAVEAVPEGVDTLGSLQAVAGTAREQGWESALLVSDPWHSLRARTMARDAGLEA 182
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S + + Y +E +L
Sbjct: 183 WTSPTRSGPMVQTRETQFHYIY------RETGALLFYELT 216
>gi|229097607|ref|ZP_04228566.1| hypothetical protein bcere0020_28490 [Bacillus cereus Rock3-29]
gi|229106282|ref|ZP_04236779.1| hypothetical protein bcere0019_52930 [Bacillus cereus Rock3-28]
gi|229116606|ref|ZP_04245993.1| hypothetical protein bcere0017_28920 [Bacillus cereus Rock1-3]
gi|228666916|gb|EEL22371.1| hypothetical protein bcere0017_28920 [Bacillus cereus Rock1-3]
gi|228677137|gb|EEL31517.1| hypothetical protein bcere0019_52930 [Bacillus cereus Rock3-28]
gi|228685877|gb|EEL39796.1| hypothetical protein bcere0020_28490 [Bacillus cereus Rock3-29]
Length = 219
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTDDDVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YALKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIHSYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|227551940|ref|ZP_03981989.1| integral membrane protein [Enterococcus faecium TX1330]
gi|293378333|ref|ZP_06624502.1| putative membrane protein [Enterococcus faecium PC4.1]
gi|293571655|ref|ZP_06682676.1| integral membrane protein [Enterococcus faecium E980]
gi|227178941|gb|EEI59913.1| integral membrane protein [Enterococcus faecium TX1330]
gi|291608325|gb|EFF37626.1| integral membrane protein [Enterococcus faecium E980]
gi|292643197|gb|EFF61338.1| putative membrane protein [Enterococcus faecium PC4.1]
Length = 399
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y + + +++ I++ G + E+I
Sbjct: 228 LINGET-------VSPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 371
>gi|158321219|ref|YP_001513726.1| hypothetical protein Clos_2195 [Alkaliphilus oremlandii OhILAs]
gi|158141418|gb|ABW19730.1| protein of unknown function DUF218 [Alkaliphilus oremlandii OhILAs]
Length = 191
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 71/170 (41%), Gaps = 21/170 (12%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++I++LG P ++ R+ +T+ LY TII+SG
Sbjct: 34 PVQSDVIIVLGARLYGDKPSPMLQY--------RLEKTLTLYNEGFAD----TIIVSGAR 81
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E++ L+ +GV I E S T++N +S++++K K+ I+VS++
Sbjct: 82 GDDELITEALAMKIYLMNNGVPESAILEEDHSYSTYENLSYSNAIMKEKDLKSAIIVSNS 141
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+H+ R+ + + ++ + + F T+ ++E
Sbjct: 142 FHMSRALMIAKRLDMSASGAAAKNYPNI---------FLTTKYYIREVFA 182
>gi|257886897|ref|ZP_05666550.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257895468|ref|ZP_05675121.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257822951|gb|EEV49883.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257832033|gb|EEV58454.1| conserved hypothetical protein [Enterococcus faecium Com12]
Length = 368
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y + + +++ I++ G + E+I
Sbjct: 197 LINGET-------VSPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAIAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 310 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 340
>gi|255319326|ref|ZP_05360543.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262379770|ref|ZP_06072926.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303719|gb|EET82919.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262299227|gb|EEY87140.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 379
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 18/185 (9%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ P IV+LG G T+ I + + + R+ +T+ + K H I
Sbjct: 204 PVYPASSSKPYAIVVLGGGLTLADNQKDIVV--NKYTRLRLEKTLEVEKQY-----HLPI 256
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KN 175
++SG E+ L E V + LE +S++T +N++FSS +++ G
Sbjct: 257 VLSG--------VEAPYMQAWLKERNV--EAKLLENRSMNTCENSRFSSLLLQKKGGAPT 306
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+IL++ YH+ R++ F GI T + + P N+ + A E + +
Sbjct: 307 VILITDVYHMPRTRRLFALNGIETIPVEAPMPSKLTDWRPSRQNYDHSRRANYEMLATIR 366
Query: 236 AYYRG 240
G
Sbjct: 367 DILFG 371
>gi|330685387|gb|EGG97045.1| putative membrane protein [Staphylococcus epidermidis VCU121]
Length = 320
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M LS + LI+ S+ + ++ L S IG+ + L ++ S
Sbjct: 85 MCLSIMRLILFMSACFYISLSPLVIINGIALWLSLIGFTTLFAFLCYL---TWSSTFGSR 141
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + ++I++LG G P ++ R+ + +Y +++SG
Sbjct: 142 HFNQSVDLIIVLGAGIFTEEVTPMLK--------ERLDRALEIYH---YSEHKPKLLVSG 190
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV- 179
G + ESI L++ GV D+I LE QS +T N +S +I + +V
Sbjct: 191 GQGPDEPIPESIAMQRYLIKQGVPNDNILLEQQSTNTHTNFVYSKDIIHDYFVNMPKIVC 250
Query: 180 -SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+S +H+ R+ ++ I T S + Y ++ +++++G++ Y
Sbjct: 251 VTSQFHILRALKLAKNLDIPTYGVGS---HTPYHFFHIA--------LIRDFLGVMYQY 298
>gi|332293547|ref|YP_004432156.1| protein of unknown function DUF218 [Krokinobacter diaphorus
4H-3-7-5]
gi|332171633|gb|AEE20888.1| protein of unknown function DUF218 [Krokinobacter diaphorus
4H-3-7-5]
Length = 222
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 18/193 (9%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +KI ++ ++ G + + + + + + +++LG
Sbjct: 1 MLKHFKKIIAVTLVGIILLICGVYALSYHVE---ESTKSQTFTNISQVPKAYTVIVLGAS 57
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
S R+ + LYK K + GD E
Sbjct: 58 VRAN-------GNLSTMLEDRVSSALSLYKEGKVKRFLLS-----GDNGTASYNEPKAMK 105
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ GV DDI L+ DT+ + +SS+ + ++V+ +HL R+
Sbjct: 106 AYLMDKGVPEDDIFLDYAGFDTYDSMYRASSVFNVKE---AVVVTQEFHLPRALYIANQL 162
Query: 196 GINTKASCSDYLN 208
G+ D
Sbjct: 163 GLTYYGFVGDQRT 175
>gi|264678457|ref|YP_003278364.1| hypothetical protein CtCNB1_2322 [Comamonas testosteroni CNB-2]
gi|262208970|gb|ACY33068.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
Length = 270
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 83/242 (34%), Gaps = 34/242 (14%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
LSW + V +W ++++ + +L I L+PQ
Sbjct: 57 LSWKWRSVQHWRASRPLNQRLWSLGWVVLALWLISLFWF--------WSRLSGLGLAPQQ 108
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
IV+LG+GT + P +R+ + +L K Q + + GG
Sbjct: 109 VPPVQSIVVLGSGT--------LDGHPRPVLAARLDQAAQLAKLQPQ----ALVAVCGGV 156
Query: 123 PQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNIIL 178
+E+ V L + + + LE S T N + S ++ + +
Sbjct: 157 DWGEKESEAEVMARYLQQHHGIAAQRLVLEKLSTSTELNLKLSRPLLAERGVTADAPMAM 216
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
VSS +HL R+ + + + PL+ F L+EY + ++
Sbjct: 217 VSSDFHLMRAMDIAKRQDL-PQVYPVAAPT------PLATRFNAW---LREYFAMASSWL 266
Query: 239 RG 240
G
Sbjct: 267 LG 268
>gi|25028730|ref|NP_738784.1| hypothetical protein CE2174 [Corynebacterium efficiens YS-314]
gi|23494016|dbj|BAC18984.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 252
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 75/217 (34%), Gaps = 29/217 (13%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+R+I + + + + + LL L ++ I++LG
Sbjct: 23 KVRRISRGTVYAAVIVGVVAQPVLRSLLYSLWRP-------GNDRRVIESILVLG----- 70
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS Q +R+ +L++ + + + GG E+ V L
Sbjct: 71 ---TAQYDGRPSRQFAARLRHAAQLWRQHESQ----RVYVVGGKLPGDRFTEAEVAREYL 123
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GVE D I S T + + S + + +++V+ H R+ + G +
Sbjct: 124 IREGVEPDLII----SQPTGNDTRGSYAPLDPADVGRVLIVTDPNHSYRAVRIARRMGFD 179
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + Y A P + F E+ G+L+
Sbjct: 180 AYPAPTPYTPA---TFPSKSFF---TTLSHEWGGVLV 210
>gi|319939407|ref|ZP_08013767.1| GdmH protein [Streptococcus anginosus 1_2_62CV]
gi|319811393|gb|EFW07688.1| GdmH protein [Streptococcus anginosus 1_2_62CV]
Length = 332
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 99/236 (41%), Gaps = 31/236 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I L ++ I +S L + + + I+ + ++ K
Sbjct: 108 IALSLALTFFFPHFIVLRKMLSITNGLLIYGSYLYVTYIIYGFVYNTFPVI-------KH 160
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + R+ + +Y+ H I++SGG
Sbjct: 161 PDYIIILGSGLIGDKVPPLL--------AQRLEKGKTMYEK---FHNHPKIVVSGGQGVD 209
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM--IKNMQGKNIILVSSAY 183
+ E+ L + + ++DI +E QS +T +N QFS ++ K+ + ++V++++
Sbjct: 210 EPITEAEAMAQYLRQVCIPQEDIIIEQQSTNTLENLQFSKTILDQKSKENYYCLVVTNSF 269
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H R+ +Y + GI SI +A ++L ++E IG+++ Y++
Sbjct: 270 HSLRAGIYMRKLGIK-----------GRSIGSRTALYFLPSAWIRETIGLIVLYWK 314
>gi|227510603|ref|ZP_03940652.1| integral membrane protein [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190255|gb|EEI70322.1| integral membrane protein [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 351
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 94/264 (35%), Gaps = 47/264 (17%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI---------FFMSCFMLLFSF-----------IGWGI 40
++ S++FL ++ + + R + + + F F
Sbjct: 78 LIFSFVFLFINAYFAWKREGRSLSSSLTLILGIGVILVDIFFLFDPINAPKPIQNFITMF 137
Query: 41 IPTILLKHLQFSYQRPLLSPQ-----WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ + L + + K D + I++LG+G + +
Sbjct: 138 LTLFIFYILLTVWNTMVSMIVYNLYFPKYDKDYIIVLGSGLIDG-------YKVGRLLGN 190
Query: 96 RIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
RI + + Y K+ + H +I SGG + E + L+ GV D +E +S
Sbjct: 191 RINKGIEFYHLQLKKTAKHAKLIFSGGQGGDEKIPEGVAMKKYALDQGVPETDTLVEDKS 250
Query: 155 LDTFQNAQFSSSMIKN---MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
++T QN FS +IKN I+ V++ +H R + GI +
Sbjct: 251 INTRQNLIFSDRIIKNDSGRDDNKIVFVTNNFHTLRGGILAGKLGIPATGIGA------- 303
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
+ +YL ++EY+ + +
Sbjct: 304 ----KTPFYYLPNAVIREYLALFV 323
>gi|28211594|ref|NP_782538.1| membrane associated protein [Clostridium tetani E88]
gi|28204035|gb|AAO36475.1| membrane associated protein [Clostridium tetani E88]
Length = 192
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 21/204 (10%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
I + I+ I+L + + + I++LG P ++
Sbjct: 7 VIIYSILFGIILTLILGMNIYLFGRNSKAEKSDCIIILGCSVYGETPSPFLQW------- 59
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
RI E RLYK I+ SGG ++E+ L+ G++ + I E +S
Sbjct: 60 -RIEEGYRLYKEGYGRY----ILASGGKGPGESISEAEAMKRYLISKGIKEEYIIKEDKS 114
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T +N + + +++ KN ++VS+ YHLKR+ L + GI++ S Y+ +Y
Sbjct: 115 TSTMENLKNCNKIMEKKGLKNAVIVSNKYHLKRASLMTKKVGIDSSFSGV-YVTSYKK-- 171
Query: 215 PLSANFYLTELALKEYIGILIAYY 238
+ ++E +L Y
Sbjct: 172 ------HEIYGFIREIPALLKFYI 189
>gi|148378651|ref|YP_001253192.1| exported protein [Clostridium botulinum A str. ATCC 3502]
gi|153933579|ref|YP_001383034.1| putative sanA protein [Clostridium botulinum A str. ATCC 19397]
gi|153934960|ref|YP_001386583.1| putative sanA protein [Clostridium botulinum A str. Hall]
gi|226947902|ref|YP_002802993.1| putative SanA protein [Clostridium botulinum A2 str. Kyoto]
gi|148288135|emb|CAL82203.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152929623|gb|ABS35123.1| putative SanA protein [Clostridium botulinum A str. ATCC 19397]
gi|152930874|gb|ABS36373.1| putative SanA protein [Clostridium botulinum A str. Hall]
gi|226841482|gb|ACO84148.1| putative SanA protein [Clostridium botulinum A2 str. Kyoto]
Length = 222
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 74/195 (37%), Gaps = 19/195 (9%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ I++IF + ++L I ++ Y ++P+ + I++LG
Sbjct: 1 MKNKIKRIFMVIMVIVLMGTAAIFFI-DFRVRSESKKYI---VNPKDVPEAEAILVLGAY 56
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ R+ + LYK+ K ++ GD + E
Sbjct: 57 VKPN-------GKLCDMLEDRVAVGIDLYKNNKAKK-----LLFSGDHGQANYDEVNGMK 104
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ GV+++DI L+ T+++ + + K + I+V+ YHL R+ +
Sbjct: 105 KVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKAKKI---IIVTQQYHLMRAVYIARQL 161
Query: 196 GINTKASCSDYLNAY 210
G++ SD N +
Sbjct: 162 GLDAYGVNSDQRNYW 176
>gi|289434272|ref|YP_003464144.1| hypothetical protein lse_0905 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170516|emb|CBH27056.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 344
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 85/212 (40%), Gaps = 20/212 (9%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
++ F+ + L + + + +++LG+G +P +
Sbjct: 125 VLGIVIVFVVTLVGYFSFLFLSFLLSTFIYQYNFPRYNQDFLIVLGSGLIGGDRVPPL-- 182
Query: 88 EPSFQSYSRIFETMRLYKSC-KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
SR+ + Y+ + T I+SGG ++E+ L+ G++
Sbjct: 183 -----LASRLDRAIAFYEKQLAKKGKRATFIVSGGQGDNETISEAEAMRGYLISKGIDET 237
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAYHLKRSQLYFQHFGINTKASCSD 205
I +E +S++T QN QFS + + + L ++ +HL R+ LY + G+ ++ +
Sbjct: 238 FIIMENKSVNTLQNMQFSKKKMDAIMPEYNSLFSTNNFHLFRASLYARKAGLKSQGIGA- 296
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+A +Y+ ++E+I + Y
Sbjct: 297 ----------KTALYYMPNALIREFIATIFMY 318
>gi|326406078|gb|ADZ63149.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 341
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/242 (17%), Positives = 91/242 (37%), Gaps = 34/242 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+++ L + + + I+++ ++LL I + +L Y
Sbjct: 107 LLIAFPALFMLFTFSTKTIPQIIWYILLYILLIDIILCFLFAAYIL------YSWMSQMI 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+K + I++LG+G P ++ SR+ + + Y+ ++SG
Sbjct: 161 PLQKKIDYIIILGSGVRSEEVPPLLK--------SRLDKGIEYYQKNP----TAKFVVSG 208
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G ++E+ L + I E +S T++N FS +I +
Sbjct: 209 GQGADEPVSEAFAMRKYLHSQNIPNHQILFEDKSTTTYENMLFSKRIINEDWSDKEMLPS 268
Query: 178 --LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R LY Q + + + +A ++L ++EYI +L+
Sbjct: 269 IIFSTNNYHVLRGSLYAQRVKLKAQGVGA-----------PTALYFLPTALIREYIALLL 317
Query: 236 AY 237
Sbjct: 318 HR 319
>gi|310826960|ref|YP_003959317.1| hypothetical protein ELI_1368 [Eubacterium limosum KIST612]
gi|308738694|gb|ADO36354.1| hypothetical protein ELI_1368 [Eubacterium limosum KIST612]
Length = 346
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 91/236 (38%), Gaps = 28/236 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+ + L + + + S ++ F G+ I +
Sbjct: 106 IMLAALILFYTLPFFMNVNPVIPLIYSMLAIVVLFFGFLFISFA-------NASALYYFN 158
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH-SMHCTIIIS 119
+ + + I++LG P + R+ + Y+ + ++S
Sbjct: 159 KPSYNEDFILILGCRVIDGKVTPLL--------AKRLNRAIAFYEKQMEMTGKKAKFVVS 210
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIIL 178
GG ++E++V + LL G + DI +E S +T +N FS ++I I
Sbjct: 211 GGKGMDESVSEALVMKDYLLSKGYHKSDILVEEHSRNTRENMLFSKAIIDRLKPNARGIF 270
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
V+S++H+ R+ LY + ++ + +A +Y L+E+IG+L
Sbjct: 271 VTSSFHVLRASLYARDAELDFTGVPA-----------KTAFYYFPNAFLREFIGVL 315
>gi|18309791|ref|NP_561725.1| hypothetical protein CPE0809 [Clostridium perfringens str. 13]
gi|18144469|dbj|BAB80515.1| hypothetical protein [Clostridium perfringens str. 13]
Length = 206
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 25/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
KD ++LG G PS R+ E + + + +I+
Sbjct: 37 DINQLKDVEYEIILGAGLYGDK--------PSPILQERLEEGL----KYLELHPNTKVIV 84
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII- 177
SG + ES N L+ G+ + I E +S TFQN +FS +++
Sbjct: 85 SGEQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHADKDEV 144
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V+S +HL R++ + I + S + + ++E+ ++
Sbjct: 145 LIVTSDFHLFRAKEIADYLNIKNEGLPSKTPISL-----------RVQYMVREFPAMIKL 193
Query: 237 YY 238
Sbjct: 194 LL 195
>gi|16800072|ref|NP_470340.1| hypothetical protein lin1003 [Listeria innocua Clip11262]
gi|16413462|emb|CAC96234.1| lin1003 [Listeria innocua Clip11262]
gi|313619596|gb|EFR91250.1| integral membrane protein [Listeria innocua FSL S4-378]
Length = 344
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/239 (18%), Positives = 96/239 (40%), Gaps = 20/239 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML +I L++ + ++ F+ + L
Sbjct: 98 MLPLFIGLVIVILFIFWFGSILKNGSPILGMVVVFVMAFVGYFSFLFLSFLLSTFLYQFN 157
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIIS 119
+ + + +++LG+G +P + SR+ + Y K + T I+S
Sbjct: 158 FPRYNQDFLIVLGSGLIDGDRVPPL-------LASRLNRAIAFYEKQYDKKGKRATFIVS 210
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG ++E+ + L+ G++ + I +E +S++T QN QFS + + + L
Sbjct: 211 GGQGANETVSEARAMRDYLISKGIDENFIIMEDKSVNTLQNMQFSKAKMDAIMPTYNSLF 270
Query: 180 -SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 271 STNNFHLFRAGLYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMY 318
>gi|327543348|gb|EGF29776.1| membrane protein containing DUF218 [Rhodopirellula baltica WH47]
Length = 329
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 40/264 (15%)
Query: 3 LSWIFLIVSYWHLLCQSIR------KIFFMSCFMLLFSFIGWGIIPTILL----KHLQFS 52
L W+ ++ Q R K ++ +G + LQ
Sbjct: 73 LVWLGMLALTAFAFRQWRRGTHSVVKALGWFTCFFVWWMVGNSDFANWMSGRVESPLQME 132
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
L + + +V+LG G++ + E R+ + Y + +
Sbjct: 133 PSPALEQRDLDRPLDAVVVLGGGSSAVAP---GFYELGRDG-ERVISAAQAYHAGATRKI 188
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI--------KLETQSLDTFQN--AQ 162
T + G + L+ GV D I + E QSL
Sbjct: 189 IVTGSSTDGYEPPWKQST-----QLLISLGVPEDVIVRIEGVNTQAEMQSLKQLMESPPS 243
Query: 163 FSSSMIKNMQGKNIIL----VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-------YY 211
S+ + + L ++SA+H+ R+ + + +
Sbjct: 244 ESNELRPDNTDSPDELKVGLITSAFHMPRAMRLAKASSLELIPLPCAFRAEDKQRPWVAS 303
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
S++P + N +KE I +
Sbjct: 304 SLVPNAENLETVAKMIKETIAKIA 327
>gi|302536555|ref|ZP_07288897.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302445450|gb|EFL17266.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 337
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ I L+++ L +G+ + I L L +++ +
Sbjct: 103 IFGMIALLIAVPMFHSP-----VLTGMAATLTLVVGY--VAFIFLCFLGYAF--LYGRIK 153
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII-ISG 120
+ D + +V+LG+G +P + SR+ + ++Y++ ++ SG
Sbjct: 154 VRGDVDHVVMLGSGLIGGDRVPPL-------LASRLRKGQQIYEAQLARGSRPPVLLTSG 206
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILV 179
G ++E+ + L+ GV + +KLE S T +N FS ++ + G ++V
Sbjct: 207 GKGSDERVSEARAMADWLIAEGVPAEHVKLEENSATTEENMLFSKGIMLADKPGYRCVVV 266
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +H R+ + + G+N + S +A ++L L+E++ +
Sbjct: 267 TNNFHAFRAAMLARKTGVNGQVLGS-----------PTARYFLPSALLREFVAVFW 311
>gi|160935020|ref|ZP_02082406.1| hypothetical protein CLOLEP_03896 [Clostridium leptum DSM 753]
gi|156866473|gb|EDO59845.1| hypothetical protein CLOLEP_03896 [Clostridium leptum DSM 753]
Length = 262
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 85/251 (33%), Gaps = 37/251 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL+W FL+ + ++ + F L + L L +L
Sbjct: 24 LLLAW-FLLPVFRGIVNIGNAAGILLCSFALWLAGY---PGAAGCLSSLWGHPGGKVLLS 79
Query: 61 QWKKDGNIIVLLGN-----------------GTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
++ G GT +I +PS R+
Sbjct: 80 AASLALGAFLVFGAVMSCLMAAAIHRPPKENGTVVILGCQVKGTQPSLMLTKRLEAAKEY 139
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
+ I SGG ++E+ L+E G++ + I E QS DT +N +
Sbjct: 140 LDRNPEAMC----IPSGGKGNGELVSEAQAMKAWLVEHGIDENRIYPEAQSRDTVENIRN 195
Query: 164 SSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL 222
S ++ + K++ILVS +H R+ L Q GI A + +Y++
Sbjct: 196 SKEIMDSKGLPKDMILVSDGFHQYRAGLIAQKQGIEAGAVSA--QTPWYTL--------- 244
Query: 223 TELALKEYIGI 233
++E +
Sbjct: 245 ATYWMREIFAL 255
>gi|322804976|emb|CBZ02535.1| sana protein [Clostridium botulinum H04402 065]
Length = 222
Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 73/195 (37%), Gaps = 19/195 (9%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ +++I + ++L I ++ Y ++P+ + I++LG
Sbjct: 1 MKNKMKRILVVIMAIVLMGTAAIFFI-DFRVRSESKKYI---VNPKDVPEAEAILVLGAY 56
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ R+ + LYK+ K ++ GD + E
Sbjct: 57 VKPN-------GKLCDMLEDRVAVGIDLYKNNKAKK-----LLFSGDHGQVNYDEVNGMK 104
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ GV+++DI L+ T+++ + + K + I+V+ YHL R+ +
Sbjct: 105 KVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKAKKI---IIVTQQYHLMRAVYIARKL 161
Query: 196 GINTKASCSDYLNAY 210
G++ SD N +
Sbjct: 162 GLDAYGVNSDQRNYW 176
>gi|254389035|ref|ZP_05004265.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294812508|ref|ZP_06771151.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
gi|197702752|gb|EDY48564.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294325107|gb|EFG06750.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
Length = 234
Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 61/185 (32%), Gaps = 24/185 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R + + F+ + + + + R + + + ++ ++ G G
Sbjct: 23 KRWLVRGAMFVCVLALLPATWTHRVA--------DRHVHAAEDVPAQDVALVFGAGLW-- 72
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ P+ R+ LY+ K +I+ GD + E L+
Sbjct: 73 ------QGRPTPYLAHRLDTAADLYRRGK-----VKVILVTGDNSREEYDEPDAMRTYLV 121
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + D++ + + + +LVS +H++R+ + GI +
Sbjct: 122 GRGVPERRIVSDHAGFDSWDSCVRAKEIFG---VDRAVLVSQGFHIRRAVALCRTAGIES 178
Query: 200 KASCS 204
Sbjct: 179 YGVGV 183
>gi|111018227|ref|YP_701199.1| hypothetical protein RHA1_ro01217 [Rhodococcus jostii RHA1]
gi|110817757|gb|ABG93041.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 230
Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 60/180 (33%), Gaps = 18/180 (10%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ IV+LG PS +R+ + +LY+ +I
Sbjct: 57 IDDTSAADAIVVLGAA--------QYSGTPSSVFEARLEQAYKLYERGVAPE----VITV 104
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG + E+ N L+ GV D I + DT + + S + + +LV
Sbjct: 105 GGKQEGDEYTEAASGKNYLISRGVPADSITAVEEGSDTLLSIEAVSEAMAAQGIDSAVLV 164
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S +H R++ + G++ + + A ++ +E ++
Sbjct: 165 SDPWHSLRTRTMARDAGLDAWTAPTRQGPAVFTRESQLHGIA------RETGALIWYQLT 218
>gi|254382897|ref|ZP_04998253.1| integral membrane protein [Streptomyces sp. Mg1]
gi|194341798|gb|EDX22764.1| integral membrane protein [Streptomyces sp. Mg1]
Length = 235
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 54/164 (32%), Gaps = 16/164 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ V+ G G P+ +R+ LY++ K +++ GD
Sbjct: 60 PSAEVAVVFGAGLWNG--------RPTPYLANRLDAAAELYRAGK-----VKVVLVSGDN 106
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ G E L GV + I + DT+ + + + +L+S +
Sbjct: 107 SRTGYDEPDAMRTYLTAHGVPGERIVSDFAGFDTWDSCVRAKEIFGVH---RAVLISQGF 163
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
H+ R+ + G+++ + + + A+
Sbjct: 164 HIHRAVALCEAAGVDSYGVGVTDAHDATWYYGGTREVFAAGKAV 207
>gi|188588528|ref|YP_001921214.1| GdmH [Clostridium botulinum E3 str. Alaska E43]
gi|188498809|gb|ACD51945.1| conserved hypothetical protein [Clostridium botulinum E3 str.
Alaska E43]
Length = 253
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 31/196 (15%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
L + + + + + F +L F+ K++ +
Sbjct: 51 LAFNRYFIKFNKVMRFFICIGLVLFFAI----------------EVVIISCPKSNKENTD 94
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G + S+ SR+ ++ K +S II+SGG
Sbjct: 95 YIVVLGAGLNNGD-------QLSYILKSRLDSALQCINKFKNNSY---IIVSGGKGNDER 144
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKNIILVSSA 182
++E++ LLE G+ D I +E QS +TF+N ++S +I+ ++ +V++
Sbjct: 145 ISEAMAMKKYLLEQGISEDKILMEDQSKNTFENFKYSKKLIEEQSNKNIDDLSVKIVTTD 204
Query: 183 YHLKRSQLYFQHFGIN 198
+H RS++ + G N
Sbjct: 205 FHGFRSKMLAKRNGYN 220
>gi|297160757|gb|ADI10469.1| integral membrane protein [Streptomyces bingchenggensis BCW-1]
Length = 229
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 61/185 (32%), Gaps = 16/185 (8%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ ++ + L+ + + + + V+ G G EPS
Sbjct: 23 VVMALSVVALLPATWLRLATDARVRTVADVPSAPVAVVFGAGLWNG--------EPSPYL 74
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ T LY+ K I+ GD +H E L+ GV I +
Sbjct: 75 AHRLDATAELYERGK-----IRAILVTGDNSRHDYDEPDAMRAYLVRHGVPDQRIVSDYA 129
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
DT+ + + + + +LVS +H++R+ + GI+ + +
Sbjct: 130 GFDTWDSCSRAERIFGVHR---AVLVSQDFHIRRALALCEAAGIDAYGVGVAEPHDATWL 186
Query: 214 IPLSA 218
+
Sbjct: 187 FGGAR 191
>gi|269119959|ref|YP_003308136.1| hypothetical protein Sterm_1340 [Sebaldella termitidis ATCC 33386]
gi|268613837|gb|ACZ08205.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 208
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 87/221 (39%), Gaps = 27/221 (12%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + K + ++ +++ I L K+ ++ V+LG G
Sbjct: 1 MKKINLKKLLIFIAGIIIAYVVITAISICL-----------YSKVDEKQPADVAVILGAG 49
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ P + RI + LY ++ +I +GG + + +++
Sbjct: 50 ASDEKVSPVFQ--------ERINHGISLY----KNKYVKKLIFTGGTGKGNQNSDAYTAM 97
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ GV +DDI LE S+ T +N + + ++ ILVS H+KR+ L ++
Sbjct: 98 QYAIKQGVPKDDILLEEMSVITQENIKNAKMIMDKNSYHTAILVSDPLHMKRAMLMAKNS 157
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I+ +S + Y + + F L E+ Y+G I
Sbjct: 158 KIDCYSSPT--PTTKYITLKSTLPFLLREVFF--YVGYKIY 194
>gi|125623301|ref|YP_001031784.1| hypothetical protein llmg_0434 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124492109|emb|CAL97038.1| SanA protein homolog [Lactococcus lactis subsp. cremoris MG1363]
gi|300070052|gb|ADJ59452.1| hypothetical protein LLNZ_02260 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 194
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 23/182 (12%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ ++ + I++LG+ +P+ + R+ + L Q II+
Sbjct: 34 TADKAREIDTILVLGSRINADE-------QPAKITQERLDAALLLAAKNPQ----AKIIV 82
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SG ++E+ L+ + D I E ++ DT +N +S +
Sbjct: 83 SGAKGADEPVSEAFSMKKYLMAHAISADRIISENKATDTAENLSYSKKYFHGKTV----V 138
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +HL R+ G+ + + P E +G++ A+
Sbjct: 139 VTNDFHLYRALYLASRQGLKVEGYAAKTEVINPLYYPNYYG--------HEVLGLIYAFV 190
Query: 239 RG 240
G
Sbjct: 191 FG 192
>gi|152975134|ref|YP_001374651.1| hypothetical protein Bcer98_1335 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023886|gb|ABS21656.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 193
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 90/224 (40%), Gaps = 35/224 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+L + + + ++ +I + LQ+ R + K D + +++LG
Sbjct: 1 MLTKKKSIKYSLITMFIIIGYISF----------LQYEIYR-HGHMEVKNDADYMIVLGT 49
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
A++ RI + + + I+SGG +K ++E++
Sbjct: 50 SVKGSKPSYALQY--------RIDAAA----NYLKQNERTIAILSGGQGKKEHISEALAM 97
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L++ G+ + + LE +S +T +N FS +I + K +LV++ +H+ R++ +
Sbjct: 98 KRGLMKQGISEERMILEDRSTNTDENITFSKELIPPDR-KKGLLVTNDFHMFRAKKIAEK 156
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G++ + + +I + ++EY I +
Sbjct: 157 QGLHLEGLSA--RTPKPIVIKSN---------IREYFAITKYWM 189
>gi|293568622|ref|ZP_06679937.1| integral membrane protein [Enterococcus faecium E1071]
gi|291588582|gb|EFF20415.1| integral membrane protein [Enterococcus faecium E1071]
Length = 399
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 30/223 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y + + +++ I++ G + E+I
Sbjct: 228 LINGET-------VSPLLAKRINKAIAFYGAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + + +A +YL L+EYI ILI
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILI 372
>gi|294620208|ref|ZP_06699542.1| integral membrane protein [Enterococcus faecium E1679]
gi|314940170|ref|ZP_07847348.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a04]
gi|314942413|ref|ZP_07849256.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133C]
gi|314952311|ref|ZP_07855322.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133A]
gi|314994246|ref|ZP_07859549.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133B]
gi|314997161|ref|ZP_07862147.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a01]
gi|291593561|gb|EFF25101.1| integral membrane protein [Enterococcus faecium E1679]
gi|313588735|gb|EFR67580.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a01]
gi|313591333|gb|EFR70178.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133B]
gi|313595570|gb|EFR74415.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133A]
gi|313598813|gb|EFR77658.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133C]
gi|313640609|gb|EFS05189.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a04]
Length = 399
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y++ + +++ I++ G + E+I
Sbjct: 228 LINGET-------VSPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 371
>gi|259507791|ref|ZP_05750691.1| secreted protein [Corynebacterium efficiens YS-314]
gi|259164584|gb|EEW49138.1| secreted protein [Corynebacterium efficiens YS-314]
Length = 231
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 75/217 (34%), Gaps = 29/217 (13%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+R+I + + + + + LL L ++ I++LG
Sbjct: 2 KVRRISRGTVYAAVIVGVVAQPVLRSLLYSLWRP-------GNDRRVIESILVLG----- 49
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS Q +R+ +L++ + + + GG E+ V L
Sbjct: 50 ---TAQYDGRPSRQFAARLRHAAQLWRQHESQ----RVYVVGGKLPGDRFTEAEVAREYL 102
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GVE D I S T + + S + + +++V+ H R+ + G +
Sbjct: 103 IREGVEPDLII----SQPTGNDTRGSYAPLDPADVGRVLIVTDPNHSYRAVRIARRMGFD 158
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + Y A P + F E+ G+L+
Sbjct: 159 AYPAPTPYTPA---TFPSKSFF---TTLSHEWGGVLV 189
>gi|257884113|ref|ZP_05663766.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|257819951|gb|EEV47099.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
Length = 368
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y++ + +++ I++ G + E+I
Sbjct: 197 LINGET-------VSPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 310 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 340
>gi|257879975|ref|ZP_05659628.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257893086|ref|ZP_05672739.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|257814203|gb|EEV42961.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257829465|gb|EEV56072.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
Length = 368
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y++ + +++ I++ G + E+I
Sbjct: 197 LINGET-------VSPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EY+ IL
Sbjct: 310 RQAKLKANGIGA-----------KTAFYYLPNAFLREYLAIL 340
>gi|329667272|gb|AEB93220.1| hypothetical protein LJP_0894 [Lactobacillus johnsonii DPC 6026]
Length = 346
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 93/238 (39%), Gaps = 33/238 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+++++FL L + ++ +++ I I++ + S+ L
Sbjct: 118 IIAYLFLFPLVGKLTHNNFGTYIYLFINLVIIYLI------FIMMMYTLTSWIN--LVNI 169
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + +V+LG G P + +RI + +Y+ II+SGG
Sbjct: 170 KTKKLDYVVVLGAGLMGKKVTPLL--------AARINRGIEVYRRNP----GSKIIMSGG 217
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E++ E G+ + DI +E +S T +N FS ++K +V++
Sbjct: 218 QGPGEEIPEAVAMAKYAEEKGISKQDIIVEDKSKTTRENLIFSHRLMKP--DSRFAIVTN 275
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+YH+ R+ + + G+ + + ++ ++E+I L +R
Sbjct: 276 SYHVYRALVLAKRLGLQCIGYGA-----------KTKWYFTLNAFVREFIAYLTITWR 322
>gi|290960619|ref|YP_003491801.1| hypothetical protein SCAB_62441 [Streptomyces scabiei 87.22]
gi|260650145|emb|CBG73261.1| putative secreted protein [Streptomyces scabiei 87.22]
Length = 221
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 16/166 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ G G + EPS R+ LY+S + +++
Sbjct: 44 ADVPRTEVAMVFGAGLW--------QGEPSPYLARRLDAAAELYRSGR-----IKVVLVT 90
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD + E L E GV D I + DT+ + + + +L+S
Sbjct: 91 GDNSRVEYDEPDAMRGYLTEHGVPDDRIVSDYAGFDTWDSCVRARKIFG---VDRAVLIS 147
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+H++R+ + G+ + + + + A
Sbjct: 148 QGFHIRRAVALCEEAGVESYGVGVQDRHDATWYYGATRELFAAGKA 193
>gi|329930832|ref|ZP_08284231.1| hypothetical protein HMPREF9412_4101 [Paenibacillus sp. HGF5]
gi|328934534|gb|EGG31039.1| hypothetical protein HMPREF9412_4101 [Paenibacillus sp. HGF5]
Length = 217
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 67/181 (37%), Gaps = 18/181 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +L +G ++ + RP ++ ++ ++LG
Sbjct: 15 RKRAWYRRGIYTLLSLVVLGVFW-SGYAYWKIESAVSRPA------ENADVGIILGASMW 67
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P +R R+ + Y + I+ G D ++ E+ N
Sbjct: 68 GDQPSPGLR--------ERLEHALVEYNAG---RFDTFIVTGGLDKPEYNYTEAEGMRNF 116
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+E+GV + I LE ++ T++N +S ++++ I+V+ YH R+ G
Sbjct: 117 LVEAGVPEERIFLENEATSTYENLLYSQAIMEEHGWNTAIIVTHDYHGTRAMEVATALGY 176
Query: 198 N 198
+
Sbjct: 177 D 177
>gi|329930883|ref|ZP_08284276.1| hypothetical protein HMPREF9412_5832 [Paenibacillus sp. HGF5]
gi|328934500|gb|EGG31008.1| hypothetical protein HMPREF9412_5832 [Paenibacillus sp. HGF5]
Length = 210
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 21/188 (11%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R + + ++ + + + K+ + P + ++LG
Sbjct: 12 SRRKRVLLRVVLGLIAIMLVYSVNVGYTIWKYAGRTVNIP---------SDAAIVLGAAV 62
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + + LY +I +GG + +AES
Sbjct: 63 WEGK--------PSPVFQGRIDQALWLYDQQ----YVDKLIFTGGRGSEDEVAESEAAKQ 110
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV DI +ET S T QN ++ + + ++VS H+KR+ + + G
Sbjct: 111 YAIKHGVPERDILVETTSAITEQNLYYADKLGDAAGLSSYLIVSDPLHMKRAMVMAEDMG 170
Query: 197 INTKASCS 204
+ S +
Sbjct: 171 LEANPSPA 178
>gi|294623043|ref|ZP_06701932.1| integral membrane protein [Enterococcus faecium U0317]
gi|291597599|gb|EFF28761.1| integral membrane protein [Enterococcus faecium U0317]
Length = 399
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCVPLILIYLFI---VFYNFLTISFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y++ + +++ I++ G + E+I
Sbjct: 228 LINGET-------VSPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 371
>gi|229139714|ref|ZP_04268284.1| hypothetical protein bcere0013_28240 [Bacillus cereus BDRD-ST26]
gi|228643845|gb|EEL00107.1| hypothetical protein bcere0013_28240 [Bacillus cereus BDRD-ST26]
Length = 219
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTDDSVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|69249391|ref|ZP_00604956.1| Protein of unknown function DUF218 [Enterococcus faecium DO]
gi|258614355|ref|ZP_05712125.1| hypothetical protein EfaeD_01478 [Enterococcus faecium DO]
gi|68194178|gb|EAN08708.1| Protein of unknown function DUF218 [Enterococcus faecium DO]
Length = 399
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y++ + +++ I++ G + E+I
Sbjct: 228 LINGET-------VSPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EY+ IL
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYLAIL 371
>gi|324327048|gb|ADY22308.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 210
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 6 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTDDSVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 198
>gi|228986175|ref|ZP_04146317.1| hypothetical protein bthur0001_28620 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228773556|gb|EEM21980.1| hypothetical protein bthur0001_28620 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 219
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTDDSVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|229156674|ref|ZP_04284762.1| hypothetical protein bcere0010_28590 [Bacillus cereus ATCC 4342]
gi|228626843|gb|EEK83582.1| hypothetical protein bcere0010_28590 [Bacillus cereus ATCC 4342]
Length = 219
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTDDSVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGVENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|32471470|ref|NP_864463.1| hypothetical protein RB1526 [Rhodopirellula baltica SH 1]
gi|32443311|emb|CAD72142.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
Length = 328
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 80/264 (30%), Gaps = 40/264 (15%)
Query: 3 LSWIFLIVSYWHLLCQSIR------KIFFMSCFMLLFSFIGWGIIPTILL----KHLQFS 52
L W+ ++ L Q R K ++ +G G + LQ
Sbjct: 72 LVWLGMLALTAFALRQWRRGTHSVVKALGWFTCFFVWWMVGNGDFANWMSGRVESPLQME 131
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
L + + +V+LG G++ + E R+ + Y + +
Sbjct: 132 PSPALEQRDLDRPLDAVVVLGGGSSAVAP---GFYELGRDG-ERVISAAQAYHAGATRKI 187
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI--------KLETQSLDTFQN--AQ 162
T + G + L+ GV D I + E +SL
Sbjct: 188 IVTGSSTDGYEPPWKQST-----QLLMSLGVPEDVIVRIEGVNTQAEMRSLKQLMESPPS 242
Query: 163 FSSSMIKNMQGKNIIL----VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY------- 211
S+ + + L ++SA+H+ R+ + + + +
Sbjct: 243 ESNELRPDNTDSPDELKVGLITSAFHMPRAMRLAKASSLELIPLPCAFRASSNERPWIAS 302
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
S++P + N +KE I +
Sbjct: 303 SLVPGAGNLETVAKMIKETIAKIA 326
>gi|42782182|ref|NP_979429.1| hypothetical protein BCE_3127 [Bacillus cereus ATCC 10987]
gi|42738107|gb|AAS42037.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 210
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 6 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTDDSVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGTENGIRTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 198
>gi|300786369|ref|YP_003766660.1| hypothetical protein AMED_4488 [Amycolatopsis mediterranei U32]
gi|299795883|gb|ADJ46258.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 329
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++ ++L + G+ + ++ Y + + I++LG G
Sbjct: 120 RWGSALVAIAVVLGGYFGFLFLSLLV-------YSVVYSRIGRRGGFDAIIVLGCGLDGE 172
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + R+ +RL+ + +++SGG ++E+ + L
Sbjct: 173 RVPPLL--------AGRLERAIRLHDREPEP---PLLVVSGGRGPGETVSEAEAMHAYLR 221
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ G+ D I+ E ++ T +N +FS+ ++ + ++ V+S+YH+ R+ + + G+
Sbjct: 222 DRGIPDDHIRREDRARTTEENLRFSADLL-PAGARRVVAVTSSYHVFRAAVECRRLGLPF 280
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A+ + +A ++L L+E+ +++ Y R
Sbjct: 281 HATGA-----------PTARYFLPSALLREFAALILHYRR 309
>gi|228991260|ref|ZP_04151218.1| hypothetical protein bpmyx0001_20190 [Bacillus pseudomycoides DSM
12442]
gi|228768484|gb|EEM17089.1| hypothetical protein bpmyx0001_20190 [Bacillus pseudomycoides DSM
12442]
Length = 185
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 84/208 (40%), Gaps = 34/208 (16%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L + + + + + + + + + + +++LG P
Sbjct: 4 WILLVILLFPPLCIMYMTY----RMKKVACEKLSDNAPYVLILGAKLFGDK--------P 51
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S +R+ + S + +I+SGG + + E+ N L++ G+E + I
Sbjct: 52 SLSLQNRLDVALMYLNSHPET----KVIVSGGQGEDEDIPEAHSMRNYLIKHGIEENRIF 107
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG--INTKASCSDYL 207
+E +S T++N +FS + + ++VS+ YHL R+++ + G + + A+ +
Sbjct: 108 IEDRSTSTYENLKFSMDL---YHVMHAVVVSNTYHLYRTKIIAKRLGMQMESLAAPTPRR 164
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILI 235
+ + ++EY I+
Sbjct: 165 SEKKAY-------------IREYAAIIK 179
>gi|212715681|ref|ZP_03323809.1| hypothetical protein BIFCAT_00581 [Bifidobacterium catenulatum DSM
16992]
gi|212661048|gb|EEB21623.1| hypothetical protein BIFCAT_00581 [Bifidobacterium catenulatum DSM
16992]
Length = 255
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 79/239 (33%), Gaps = 31/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + +F I+ + L + ++ + IG T+ S +
Sbjct: 47 LAFAALFAILGFGLLFRWWTILPRLVRGILIAVACIGLVAFGTV------ESCIVSKMHA 100
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q K D + +V+LG +R R+ + + I+SG
Sbjct: 101 QGKPDLDYVVVLGAQVRKSGPSLVLRY--------RLDKAIEYLDENPNTIC----IVSG 148
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ + L E G+ I E+ S T +N S MI N +I +++
Sbjct: 149 GKGPNEPFPEAQGMADYLKEHGIAEQRILEESDSKTTEENIVNSKKMI-NDDNASIGVIT 207
Query: 181 SAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +H+ R+ +G+ N + + L ++E+ +
Sbjct: 208 NNFHMFRALQIADKYGLDNAQGIAAGSPPD-----------MLVNNMVREFFAEIKFLL 255
>gi|225019145|ref|ZP_03708337.1| hypothetical protein CLOSTMETH_03097 [Clostridium methylpentosum
DSM 5476]
gi|224948092|gb|EEG29301.1| hypothetical protein CLOSTMETH_03097 [Clostridium methylpentosum
DSM 5476]
Length = 188
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 80/217 (36%), Gaps = 32/217 (14%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I + C ++ F + +I +L + R +++LG
Sbjct: 1 IHKVLCVLVAFGALFALVISCFMLFGFRSYQGRDF--------DGTVIVLGCHIKGD--- 49
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+PS R+ + K + + I+SGG + +E+ + L E G
Sbjct: 50 -----QPSVMLAGRLDKAAEFLKENPRANC----IVSGGRGKDEMYSEAEIMKKYLTEKG 100
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ I E QS++T N + S M++ GK ++V+ +H R+QL +N+++
Sbjct: 101 ISPQRILEENQSVNTQTNLRNSKQMMEEKGLGKTAVIVTDRFHQYRAQLCADRIQLNSQS 160
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ L L+E +L A+
Sbjct: 161 VPCETRPDL-----------LVAFWLREIPAVLQAWL 186
>gi|309778681|ref|ZP_07673455.1| periplasmic protein [Ralstonia sp. 5_7_47FAA]
gi|308922531|gb|EFP68154.1| periplasmic protein [Ralstonia sp. 5_7_47FAA]
Length = 207
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 78/209 (37%), Gaps = 23/209 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R I + L IG I+ ++ + + S+ P + ++LG
Sbjct: 12 RRAIVIGPLMLALLFAIGLFIVAWQIVSYGEQSFNAP---------VDAAIVLGAAVWGN 62
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI E + Y Q+ ++ +GG P +E V +
Sbjct: 63 KPSPVYR--------ERINEAITRY----QNKQVRYLVFTGGTPGADYPSEGKVGREYAI 110
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV D I ET S T+QN + ++ + ++LVS HL+R+ G+
Sbjct: 111 KHGVPPDAILAETTSRTTWQNLVNAKKLLDPLGIHTVLLVSDPLHLRRATAMANDIGLQA 170
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALK 228
+ ++ + + ANF E+ L
Sbjct: 171 LPGPTS--SSRFESLSTRANFLWREIWLY 197
>gi|293553828|ref|ZP_06674443.1| integral membrane protein [Enterococcus faecium E1039]
gi|291602034|gb|EFF32271.1| integral membrane protein [Enterococcus faecium E1039]
Length = 399
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y++ + +++ I++ G L E+I
Sbjct: 228 LINGET-------VSPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKLPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 371
>gi|65320363|ref|ZP_00393322.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|228915677|ref|ZP_04079263.1| hypothetical protein bthur0012_28950 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928153|ref|ZP_04091197.1| hypothetical protein bthur0010_28550 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228934353|ref|ZP_04097192.1| hypothetical protein bthur0009_28120 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228946697|ref|ZP_04109005.1| hypothetical protein bthur0007_28350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229046787|ref|ZP_04192429.1| hypothetical protein bcere0027_28050 [Bacillus cereus AH676]
gi|229092098|ref|ZP_04223281.1| hypothetical protein bcere0021_28900 [Bacillus cereus Rock3-42]
gi|229110541|ref|ZP_04240111.1| hypothetical protein bcere0018_27940 [Bacillus cereus Rock1-15]
gi|229122649|ref|ZP_04251860.1| hypothetical protein bcere0016_29430 [Bacillus cereus 95/8201]
gi|229128413|ref|ZP_04257394.1| hypothetical protein bcere0015_28580 [Bacillus cereus BDRD-Cer4]
gi|229145685|ref|ZP_04274067.1| hypothetical protein bcere0012_28360 [Bacillus cereus BDRD-ST24]
gi|229151285|ref|ZP_04279491.1| hypothetical protein bcere0011_28320 [Bacillus cereus m1550]
gi|229185305|ref|ZP_04312489.1| hypothetical protein bcere0004_28590 [Bacillus cereus BGSC 6E1]
gi|228598225|gb|EEK55861.1| hypothetical protein bcere0004_28590 [Bacillus cereus BGSC 6E1]
gi|228632285|gb|EEK88908.1| hypothetical protein bcere0011_28320 [Bacillus cereus m1550]
gi|228637775|gb|EEK94223.1| hypothetical protein bcere0012_28360 [Bacillus cereus BDRD-ST24]
gi|228655272|gb|EEL11129.1| hypothetical protein bcere0015_28580 [Bacillus cereus BDRD-Cer4]
gi|228660901|gb|EEL16530.1| hypothetical protein bcere0016_29430 [Bacillus cereus 95/8201]
gi|228673025|gb|EEL28299.1| hypothetical protein bcere0018_27940 [Bacillus cereus Rock1-15]
gi|228691263|gb|EEL45026.1| hypothetical protein bcere0021_28900 [Bacillus cereus Rock3-42]
gi|228724550|gb|EEL75865.1| hypothetical protein bcere0027_28050 [Bacillus cereus AH676]
gi|228812994|gb|EEM59307.1| hypothetical protein bthur0007_28350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228825521|gb|EEM71315.1| hypothetical protein bthur0009_28120 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228831570|gb|EEM77163.1| hypothetical protein bthur0010_28550 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843963|gb|EEM89026.1| hypothetical protein bthur0012_28950 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 219
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|297194511|ref|ZP_06911909.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297152286|gb|EFH31635.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 219
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 66/200 (33%), Gaps = 21/200 (10%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + R+ ++ ++L +G T + + +P ++ V+ G
Sbjct: 1 MSVRGTRRRRLVAQAVMLGCVLGLAPT-TWMHAVADSRVRTVAEAPAR----DVAVVFGA 55
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + PS R+ LY++ K +++ GD + E
Sbjct: 56 GLW--------KGRPSPYLAHRLDTAAELYRTGK-----VKVVLVTGDNSRVEYDEPDAM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L GV D I + DT+ + + + + +LVS +H++R+ +
Sbjct: 103 RTYLTGRGVPDDRIVSDYAGFDTWDSCVRAKEIFG---VERALLVSQGFHIRRAVALCRS 159
Query: 195 FGINTKASCSDYLNAYYSII 214
G+ +
Sbjct: 160 AGVEAYGVGVAEPHDATWYY 179
>gi|229197269|ref|ZP_04324000.1| hypothetical protein bcere0001_28180 [Bacillus cereus m1293]
gi|228586228|gb|EEK44315.1| hypothetical protein bcere0001_28180 [Bacillus cereus m1293]
Length = 219
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKDEDILIETKSLFTEENLKNAKEVGVENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|313633948|gb|EFS00656.1| integral membrane protein [Listeria seeligeri FSL N1-067]
Length = 344
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 20/212 (9%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
++ FI + L + + + +++LG+G +P +
Sbjct: 125 VLGIVIVFIVTLVGYFSFLFLSFLLSTFIYQYNFPRYNQDFLIVLGSGLIGGDRVPPL-- 182
Query: 88 EPSFQSYSRIFETMRLYKSC-KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
SR+ + Y+ + T I+SGG ++E+ L+ G++
Sbjct: 183 -----LASRLDRAIAFYEKQLAKKGKRATFIVSGGQGDNEIISEAEAMRGYLISKGIDET 237
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAYHLKRSQLYFQHFGINTKASCSD 205
I +E +S++T QN QFS + + + L ++ +HL R+ LY + G+ ++ +
Sbjct: 238 FIIMENKSVNTLQNMQFSKKKMDAIMPEYNSLFSTNNFHLFRASLYARKAGLKSQGIGA- 296
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+A +Y+ ++E+I + Y
Sbjct: 297 ----------KTALYYMPNALIREFIATIFMY 318
>gi|226308856|ref|YP_002768816.1| hypothetical protein RER_53690 [Rhodococcus erythropolis PR4]
gi|226187973|dbj|BAH36077.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 229
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 30/215 (13%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R +++ +L + + G I I + + D ++++LG
Sbjct: 12 PRKRRWPRWVAGIAVLGAVVYAGSIVWISVASAGHT-----SDAADAPDAPVVIVLGAQI 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ ++ R+ + L ++ K ++ GD E N
Sbjct: 67 KDGKPMAFLKG--------RLDAAVELVEAGKA-----KAVLVSGDANGGSGDEIAAMTN 113
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E G++ I + LDT+ + ++V+ YH+ R+ + G
Sbjct: 114 YLVEQGIDERRIVGDPYGLDTYDTCFRAIHTYG---VTKALIVTQGYHVPRAVALCRDVG 170
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
I+ SD A ++I +A +E++
Sbjct: 171 IDADGVNSDCGCATPTLIKNAA---------REWV 196
>gi|288916964|ref|ZP_06411336.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
gi|288351673|gb|EFC85878.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
Length = 202
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 66/216 (30%), Gaps = 28/216 (12%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ + + L + + ++ + +++LG
Sbjct: 1 MRIVLMAVALLLVGSAATFGQVWW----------VGRGDDRRASDTLIVLGA-------- 42
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
PS +R+ + LY++ +I GG+ E+ V L + G
Sbjct: 43 SQYDGRPSAILAARLDHALELYRAGVA----PRVITVGGNQPGDRFTEAEVAATYLRDHG 98
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V + Q DT + + ++ + + ++V+ +H RS+ GI AS
Sbjct: 99 VPASAVLAVPQGRDTLSSMIAVAGLMDSRHWGSAVVVTDRWHSLRSRTIAADLGIAAVAS 158
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S A L+E IG
Sbjct: 159 PSTSGPANRGFG------TQVHYILREGIGYRFYQL 188
>gi|168178023|ref|ZP_02612687.1| putative sanA protein [Clostridium botulinum NCTC 2916]
gi|182670781|gb|EDT82755.1| putative sanA protein [Clostridium botulinum NCTC 2916]
Length = 222
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 74/195 (37%), Gaps = 19/195 (9%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ I+++F + ++L I ++ Y ++P+ + I++LG
Sbjct: 1 MKNKIKRMFMVIMVIVLMGTAAIFFI-DFRVRSESKKYI---VNPKDVPEAEAILVLGAY 56
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ R+ + LYK+ K ++ GD + E
Sbjct: 57 VKPN-------GKLCDMLEDRVAVGIDLYKNNKAKK-----LLFSGDHGQANYDEVNGMK 104
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ GV+++DI L+ T+++ + + K + I+V+ YHL R+ +
Sbjct: 105 KVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKAKKI---IIVTQQYHLMRAVYIARQL 161
Query: 196 GINTKASCSDYLNAY 210
G++ SD N +
Sbjct: 162 GLDAYGVNSDQRNYW 176
>gi|302551238|ref|ZP_07303580.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
gi|302468856|gb|EFL31949.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
Length = 228
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 24/202 (11%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R++ + + + + + L+ + + P ++ V+ G G
Sbjct: 15 RKGQRRLVQAVMGACVLALLPAAWMYVVAGDRLRTAAEVP--------RTDVAVVFGAGL 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
EPS R+ LY+ + +++ GD + E
Sbjct: 67 W--------DGEPSPYLAHRLDAAAGLYREGRVE-----VVLVTGDNSREDYDEPDAMRA 113
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L GV I + DT+ + + + +L+S +H++R+ Q G
Sbjct: 114 YLTRHGVPDRRIVSDYAGFDTWDSCVRAKKIFG---VDEAVLISQGFHIRRAVALCQAAG 170
Query: 197 INTKASCSDYLNAYYSIIPLSA 218
+ + D ++ +
Sbjct: 171 VESYGVGVDAVHDATWYYGGAR 192
>gi|332676512|gb|AEE73328.1| conserved membrane-associated protein, OmpA family
[Propionibacterium acnes 266]
Length = 229
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 63/200 (31%), Gaps = 24/200 (12%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
IR + +C + +G + L + + ++ ++LG
Sbjct: 15 RRHPIRTVVVSTCIAAFVALLGPWALAGALSYG-------KVHDVADTEPRDVAIVLGAQ 67
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS R+ LY+S K +I+ GD ++ E V
Sbjct: 68 V-------LPSGTPSAYLRGRLDVAADLYRSGKA-----KVILVSGDHRETHYNEPKVMK 115
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L+ GV I + LDT+ + + I+V+ YH R+ +
Sbjct: 116 TYLVSKGVPAARIVEDVAGLDTYDTCVRARRIFG---VDRAIMVTQDYHEIRTVATCRMT 172
Query: 196 GINTKASC--SDYLNAYYSI 213
G++ + + +
Sbjct: 173 GLDAVGVPDRTQPRDNVWWY 192
>gi|167770124|ref|ZP_02442177.1| hypothetical protein ANACOL_01467 [Anaerotruncus colihominis DSM
17241]
gi|167667756|gb|EDS11886.1| hypothetical protein ANACOL_01467 [Anaerotruncus colihominis DSM
17241]
Length = 396
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 89/225 (39%), Gaps = 31/225 (13%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R + F+L + + ++ +++++ P + +V+LG+ +
Sbjct: 198 WWRWLRLAVSFVLAAAVLTGAVLSVLMIRYAW-------FMPPRAGESYTVVVLGSQSVN 250
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+R+ R+ + ++++GG + ++E++ + L
Sbjct: 251 GKPSQILRL--------RLDAA----YTYLAAHSDTPVVVTGGVDRGETISEAVAMRDYL 298
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ G+ D I +E QS +T +N +F+ + + +++V+ +H R +Y Q G+
Sbjct: 299 IARGLPADRIYMEDQSRNTLENLRFAGELITHEDLPRQLLIVTDGFHQLRGAIYAQAAGL 358
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY-YRGN 241
+ + ++P ++E + +L A +GN
Sbjct: 359 K--PCAAVSSTTPWGLLPS--------YWVRECMALLRALVLQGN 393
>gi|168217115|ref|ZP_02642740.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182624176|ref|ZP_02951962.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177910590|gb|EDT72958.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|182380858|gb|EDT78337.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 257
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 97/245 (39%), Gaps = 37/245 (15%)
Query: 1 MLLSWIFLIVSYW--HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
++L + ++ + + LL K + +L I II + Y + L
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKKVYKPIKILALICISIFIIVEGAIIF----YPKKSL 93
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + IV+LG G + R+ +T+ + + I++
Sbjct: 94 KP-----CDYIVVLGAGIRGE--------NLTATLRDRLDKTIEYLEK---TGFNGEIVV 137
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QG 173
SGG + E+ L+E+GV +D I LE ++ T++N +S +I+N+ +
Sbjct: 138 SGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKD 197
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+I++V++ +H RS L + G N + + ++P +E+
Sbjct: 198 LDILVVTTDFHAMRSNLLAKRNGYNNIDLYTS--KTQWYLVPSMYA--------REFFAF 247
Query: 234 LIAYY 238
+Y+
Sbjct: 248 CKSYF 252
>gi|313904234|ref|ZP_07837613.1| protein of unknown function DUF218 [Eubacterium cellulosolvens 6]
gi|313471036|gb|EFR66359.1| protein of unknown function DUF218 [Eubacterium cellulosolvens 6]
Length = 242
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 85/240 (35%), Gaps = 39/240 (16%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I I +++H +KI ++ I + +I +L +
Sbjct: 37 LFFLILSIAAHFHCWALLPKKIRAGILVLVALGAIIFAVIEGCILSG---------FHQK 87
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG PS R+ + K + I+SGG
Sbjct: 88 GKPGLKYIVVLGAQVF--------ETRPSRVLRYRLDTAVDYLKENPETIC----IVSGG 135
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
E+ V L ++G+ + I E +S T QN FS ++K ++ +V++
Sbjct: 136 QGANEPRPEADVMAEYLEKAGISSERILKERKSETTTQNISFSRKLMKEE--GSVAVVTN 193
Query: 182 AYHLKRSQLYFQHFGIN---TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H+ R+ + G+ A+ + + +L ++E+ + ++
Sbjct: 194 NFHVFRALQIARKNGLKDVCGIAAPTSFK-------------HLPNNMMREFFAEVKFWF 240
>gi|182417046|ref|ZP_02948424.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237668527|ref|ZP_04528511.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379055|gb|EDT76559.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237656875|gb|EEP54431.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 273
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 93/266 (34%), Gaps = 52/266 (19%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ------ 54
++L + L+ S + F I G + + +Q
Sbjct: 24 IILGVVLLLYIILINTISSSKIAFSKPICFFAVVIIAVGFMYDKIYAFIQSKSILKKLVK 83
Query: 55 -------------------RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ + I++LG G + EPS
Sbjct: 84 IIKICIALIIAVLIVIEGVIIVYPKHNISKSDYILILGAGLSNG-------SEPSLTLSG 136
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + K ++ H I++SGG ++E+ L+ G+ I +E +S
Sbjct: 137 RLDAAIEYI---KDYNNHSKIVVSGGKGNDEKISEAEAMKKYLVSKGMPEGQILMENKST 193
Query: 156 DTFQNAQFSSSMIKNMQGK-----NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-A 209
T++N +FS +I+ K N+ +V++ +H RS+L Q G N ++Y +
Sbjct: 194 TTYENFKFSKELIEEDSNKEIDEINVKVVTTDFHAFRSKLLAQKNGYNNV---TNYSSET 250
Query: 210 YYSIIPLSANFYLTELALKEYIGILI 235
+ +IP+ L+E ++
Sbjct: 251 VWYLIPVMY--------LREGFAVVK 268
>gi|325571076|ref|ZP_08146648.1| hypothetical protein HMPREF9087_2937 [Enterococcus casseliflavus
ATCC 12755]
gi|325156161|gb|EGC68347.1| hypothetical protein HMPREF9087_2937 [Enterococcus casseliflavus
ATCC 12755]
Length = 399
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 1 MLLSWIFLIVSY----WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
++L+ + ++ + H IR +F + L++ F+ + L + + + P
Sbjct: 157 LILAVVLTVLLFSDTLLHFFPYWIRTLFGVVPLSLMYLFVVFL---NFLSISVIYQFNHP 213
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC-KQHSMHCT 115
+ + + I++LG G T S RI + + Y++ K
Sbjct: 214 ------RYNQDFIIVLGAGLLNGTT-------VSPLLAKRINKAISFYEAQFKAKKTAPR 260
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+++SGG L E++ + GV +I +ET S T++N +FS ++ +++
Sbjct: 261 LLMSGGQGSDEKLPEAVAMKEYAVAQGVPEGEILVETNSTTTYENMKFSKEIMDSLKPNG 320
Query: 176 IILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
++ S+ YH+ R+ LY + + +A +YL L+E++ I
Sbjct: 321 YKVIFSSNNYHIFRAGLYADQAQLKADGIGA-----------PTAFYYLPNAFLREFVAI 369
Query: 234 LI 235
L
Sbjct: 370 LF 371
>gi|256826645|ref|YP_003150604.1| hypothetical protein Ccur_01910 [Cryptobacterium curtum DSM 15641]
gi|256582788|gb|ACU93922.1| uncharacterized membrane protein [Cryptobacterium curtum DSM 15641]
Length = 229
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 61/156 (39%), Gaps = 14/156 (8%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
Q + + +K + I++LG +PS R+ + LY+
Sbjct: 39 QSNVKPSDEIASSRKTYDCILVLGASM-------LPNGQPSTVLKDRLDVAVNLYRKGVA 91
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
I++SG D + E +E G+ +DI + ++T+ + + +
Sbjct: 92 ----PKIVMSGDDSRALSYDEVTNMKKYAVEQGIPSEDIFCDHAGINTYDSMYRARYVFN 147
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+++++V+ YH R+ FGI+ + SD
Sbjct: 148 ---VESMVVVTQTYHQYRALFDASSFGIDCVGAPSD 180
>gi|223982522|ref|ZP_03632760.1| hypothetical protein HOLDEFILI_00034 [Holdemania filiformis DSM
12042]
gi|223965497|gb|EEF69771.1| hypothetical protein HOLDEFILI_00034 [Holdemania filiformis DSM
12042]
Length = 246
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 82/220 (37%), Gaps = 35/220 (15%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +M +L+ I + + + G +++LG
Sbjct: 56 KRWMNGIWMISGVLVLILISFMVNA------------ANTHISASQDQGTTVIVLGAKIN 103
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+PS R+ + + CT+I++GG AES + N
Sbjct: 104 AD--------QPSLILERRLQAALDYANENPE----CTVIVTGGQGNGEDYAESTIMKNW 151
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-LVSSAYHLKRSQLYFQHFG 196
L+E+G+E + I E Q+ +T +N ++S +++ + +V+ ++H R+ + + G
Sbjct: 152 LVENGLETNRILEENQARNTGENLKYSLKLLRQNNLSENVVIVTDSFHQLRASILAKQLG 211
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I S + + ++E+ G++ A
Sbjct: 212 IEQI-SAVNSKTPV---------LLIPMYTVREWFGLVKA 241
>gi|269963912|ref|ZP_06178224.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831399|gb|EEZ85546.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 248
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 27/234 (11%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+F + L S +++ + LL F+ I ++ Q + +
Sbjct: 1 MLFSRIKSKWKLKFSWKRLALVLSISLLGLFVTIIAIDRWVVLQAQ---EEIFTDYEQVP 57
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ V+LG I + RI + LYK K + GD
Sbjct: 58 KHEVAVVLGTSKYIGKI-------LNTYYTHRINAAIELYKQGKVKQFLLS-----GDNA 105
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E LL++GV + I L+ T + + + + + ++V+ +H
Sbjct: 106 HRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFH 162
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+R+ + I+ + A + +E + + A+
Sbjct: 163 CERALFIADAYNIDAQCLAVAGPTASK---------QKINMRTRELMARVKAFL 207
>gi|239944530|ref|ZP_04696467.1| hypothetical protein SrosN15_26272 [Streptomyces roseosporus NRRL
15998]
gi|239990990|ref|ZP_04711654.1| hypothetical protein SrosN1_27034 [Streptomyces roseosporus NRRL
11379]
gi|291447993|ref|ZP_06587383.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291350940|gb|EFE77844.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 336
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 85/220 (38%), Gaps = 26/220 (11%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I + L + + + + L + ++ + +V+LG+G T+
Sbjct: 122 IGVATAAGGLAVYFSFLFLCFVCYAFLYGR-------LRVRRKADFVVVLGSGLVGGSTV 174
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P + SR+ ++ + +I SGG L ES + L+ G
Sbjct: 175 PPL-------LASRLKRGQAVHARLARRGGSPVLITSGGQGPDEDLPESHAMADHLVAQG 227
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
I+ E +S +T +N +FS ++++ ++V++ YH R+ L + I +
Sbjct: 228 FPAHLIEREDRSTNTEENLRFSKAIMEKAKPDYRCVVVTNNYHAFRAALTARRVRIRGQV 287
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
S +A ++ L+E+ IL+ Y R N
Sbjct: 288 VGS-----------PTAAYFWPNATLREFAAILVDYRRSN 316
>gi|229167811|ref|ZP_04295543.1| hypothetical protein bcere0007_27710 [Bacillus cereus AH621]
gi|228615627|gb|EEK72720.1| hypothetical protein bcere0007_27710 [Bacillus cereus AH621]
Length = 210
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 76/221 (34%), Gaps = 30/221 (13%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I + M+ + + + + ++LG +
Sbjct: 6 KSKKRRILQVFLLMICSIILYVSYAAYDIWSY--------RFKTDDGVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEEELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV+ +DI +ET+SL T N + + + + +VS H+KR+ +H
Sbjct: 106 YALKHGVKEEDILIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIK 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKE---YIGIL 234
I AS + + Y + KE YIG +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELCSYIGYV 199
>gi|182435761|ref|YP_001823480.1| hypothetical protein SGR_1968 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178464277|dbj|BAG18797.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 336
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 85/220 (38%), Gaps = 26/220 (11%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I + L + + + + L + ++ + +V+LG+G T+
Sbjct: 122 IGVATAAGGLAVYFSFLFLCFVCYAFLYGR-------LRVRRKADFVVVLGSGLVGGSTV 174
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P + SR+ ++ + +I SGG L ES + L+ G
Sbjct: 175 PPL-------LASRLKRGQAVHARLSRRGGSPVLITSGGQGPDEDLPESHAMADHLVAEG 227
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
I+ E +S +T +N +FS ++++ ++V++ YH R+ L + I +
Sbjct: 228 FPEHLIEREDRSTNTEENLRFSKAIMEKAKPDYRCVVVTNNYHAFRAALTARRVRIRGQV 287
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
S +A ++ L+E+ IL+ Y R N
Sbjct: 288 VGS-----------PTAAYFWPNATLREFTAILVDYRRSN 316
>gi|75764443|ref|ZP_00743940.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228901618|ref|ZP_04065796.1| hypothetical protein bthur0014_28070 [Bacillus thuringiensis IBL
4222]
gi|228908852|ref|ZP_04072684.1| hypothetical protein bthur0013_30090 [Bacillus thuringiensis IBL
200]
gi|74488069|gb|EAO51788.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228850862|gb|EEM95684.1| hypothetical protein bthur0013_30090 [Bacillus thuringiensis IBL
200]
gi|228858030|gb|EEN02512.1| hypothetical protein bthur0014_28070 [Bacillus thuringiensis IBL
4222]
Length = 219
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 75/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LY++ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYRNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIHTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|258652152|ref|YP_003201308.1| hypothetical protein Namu_1930 [Nakamurella multipartita DSM 44233]
gi|258555377|gb|ACV78319.1| protein of unknown function DUF218 [Nakamurella multipartita DSM
44233]
Length = 203
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 19/181 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG PS +R+ LY++ I+ G
Sbjct: 33 DERAAADAIVVLGAAQYNGD--------PSPVFQARLDHAAELYRAGVA----PRIVTVG 80
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E L +G++R + + DT + + ++ ++ + +++LV+
Sbjct: 81 GGQVDDATTEGAAGAAYLQAAGIDRAALTAVGEGGDTLASLRAAAPVLAELGVSSVVLVT 140
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
H RS L + G + S A + E L+E +G+L G
Sbjct: 141 DPAHSARSALMARDLGWTVQTSPVRQGPAVRDSV-------HAEYQLRETLGLLYYRVVG 193
Query: 241 N 241
Sbjct: 194 G 194
>gi|217960516|ref|YP_002339078.1| hypothetical protein BCAH187_A3129 [Bacillus cereus AH187]
gi|217066516|gb|ACJ80766.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 210
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 6 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTDDSVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 198
>gi|229030771|ref|ZP_04186797.1| hypothetical protein bcere0028_28350 [Bacillus cereus AH1271]
gi|228730533|gb|EEL81487.1| hypothetical protein bcere0028_28350 [Bacillus cereus AH1271]
Length = 219
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTNDGVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKDEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|313638523|gb|EFS03686.1| integral membrane protein [Listeria seeligeri FSL S4-171]
Length = 344
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 85/212 (40%), Gaps = 20/212 (9%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
++ FI + L + + + +++LG+G +P +
Sbjct: 125 VLGIVIVFIVTLVGYFSFLFLSFLLSTFIYQYNFPRNNQDFLIVLGSGLIGGDRVPPL-- 182
Query: 88 EPSFQSYSRIFETMRLYKSC-KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
SR+ + Y+ + T I+SGG ++E+ L+ G+E
Sbjct: 183 -----LASRLDRAIAFYEKQLAKKGKRATFIVSGGKGDNETISEAEAMRGYLISKGIEET 237
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAYHLKRSQLYFQHFGINTKASCSD 205
I +E +S++T QN QFS + + + L ++ +HL R+ LY + G+ ++ +
Sbjct: 238 FIIMENKSVNTLQNMQFSKKKMDAIMPEYNSLFSTNNFHLFRASLYARKAGLKSQGIGA- 296
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+A +Y+ ++E+I + Y
Sbjct: 297 ----------KTALYYMPNALIREFIATIFMY 318
>gi|160913536|ref|ZP_02076227.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
gi|158434088|gb|EDP12377.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
Length = 185
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 25/206 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ L F F ++ PL Q + ++ ++LG+ + ++
Sbjct: 2 MIIIICLFFLFASCYP-----------YHRFPLYIQQTHQGYDVCIVLGSPSNTDGSLSR 50
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
I+ + R+ + LY+ I+ G + E+ V + + V
Sbjct: 51 IQKQ-------RMDHAITLYQKGSIQK-----ILISGAAVANCFIEAEVMKDYAIAQNVP 98
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DI LE + +T++N ++++ + I+V+S +H++R+ + Q F +
Sbjct: 99 EKDILLEKYAKNTYENLKYAADLCNKHHFSKTIIVTSGFHIRRAGFFAQKFLTDFTFYPV 158
Query: 205 DYLNAYYSIIPLSANFYLTELALKEY 230
I + + E+
Sbjct: 159 SEKENQRYFI--TEYLRMWNTLYYEW 182
>gi|52142423|ref|YP_084406.1| hypothetical protein BCZK2819 [Bacillus cereus E33L]
gi|206974549|ref|ZP_03235465.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|222096575|ref|YP_002530632.1| epih/gdmh-related protein [Bacillus cereus Q1]
gi|51975892|gb|AAU17442.1| conserved hypothetical protein [Bacillus cereus E33L]
gi|206747192|gb|EDZ58583.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|221240633|gb|ACM13343.1| EpiH/GdmH-related protein [Bacillus cereus Q1]
Length = 210
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 6 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTDDSVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 198
>gi|224541362|ref|ZP_03681901.1| hypothetical protein CATMIT_00522 [Catenibacterium mitsuokai DSM
15897]
gi|224525696|gb|EEF94801.1| hypothetical protein CATMIT_00522 [Catenibacterium mitsuokai DSM
15897]
Length = 345
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 96/235 (40%), Gaps = 27/235 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI--LLKHLQFSYQRPLLS 59
LLS F I + +L I +L++ I + + + L + ++
Sbjct: 111 LLSLGFAIGLFVYLFVGPIFFKSSNKIMTVLYAIISFTVFYFLSVLASYCLSAFLN-TFH 169
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K+ + I++LG G P + SRI + + + K + +I+S
Sbjct: 170 LFKKRKLDYIIVLGAGIKGEQVTPLL--------ASRIDKGIEILKKNPK----ALLIMS 217
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG + + E + G++ I +E +S +T +N FSS ++ + + LV
Sbjct: 218 GGQGKGEDIPEGEAMARYAINKGIDESKILIENKSTNTKENLLFSSKLM-TKESPRVGLV 276
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++YH+ R+ + ++ GI S ++ ++ ++E++G L
Sbjct: 277 TTSYHVFRALILAKNLGIRCIGFGS-----------VTKWYFTLNALIREFMGYL 320
>gi|326776386|ref|ZP_08235651.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
gi|326656719|gb|EGE41565.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
Length = 336
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 85/220 (38%), Gaps = 26/220 (11%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I + L + + + + L + ++ + +V+LG+G T+
Sbjct: 122 IGVATAAGGLAVYFSFLFLCFVCYAFLYGR-------LRVRRKADFVVVLGSGLVGGSTV 174
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P + SR+ ++ + +I SGG L ES + L+ G
Sbjct: 175 PPL-------LASRLKRGQAVHARLSRRGGSPVLITSGGQGPDEDLPESHAMADHLVAEG 227
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
I+ E +S +T +N +FS ++++ ++V++ YH R+ L + I +
Sbjct: 228 FPEHLIEREDRSTNTEENLRFSKAIMEKAKPDYRCVVVTNNYHAFRAALTARRVRIRGQV 287
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
S +A ++ L+E+ IL+ Y R N
Sbjct: 288 VGS-----------PTAAYFWPNATLREFTAILVDYRRSN 316
>gi|228940198|ref|ZP_04102769.1| hypothetical protein bthur0008_28470 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973089|ref|ZP_04133681.1| hypothetical protein bthur0003_28520 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228979696|ref|ZP_04140020.1| hypothetical protein bthur0002_28700 [Bacillus thuringiensis Bt407]
gi|228780009|gb|EEM28252.1| hypothetical protein bthur0002_28700 [Bacillus thuringiensis Bt407]
gi|228786648|gb|EEM34635.1| hypothetical protein bthur0003_28520 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228819324|gb|EEM65378.1| hypothetical protein bthur0008_28470 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 219
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LY++ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYRNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|269216159|ref|ZP_06160013.1| putative SanA protein [Slackia exigua ATCC 700122]
gi|269130418|gb|EEZ61496.1| putative SanA protein [Slackia exigua ATCC 700122]
Length = 228
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 15/192 (7%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+L ++ + + LF + + I+L + + IV+LG
Sbjct: 13 RVLRTFVKAFIKLVFTLALFGALVVAGLNGIVLLQAHDRVSTLAEAESEGLKADCIVVLG 72
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
S R+ + LY+S +I+ GD + E +
Sbjct: 73 ASVLSD-------GSLSPILAHRVDAAVELYESG-----AAPVIVMSGDGRASNYDEPLH 120
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ GV I + TF + + + + I V+ YHL R+
Sbjct: 121 MKEYAMSKGVPESAIVCDEGGYHTFDSMWRCAHVYGA---SSAIAVTQEYHLSRAVFDGV 177
Query: 194 HFGINTKASCSD 205
G++T SD
Sbjct: 178 GTGMDTYGVISD 189
>gi|229173740|ref|ZP_04301282.1| hypothetical protein bcere0006_28400 [Bacillus cereus MM3]
gi|228609839|gb|EEK67119.1| hypothetical protein bcere0006_28400 [Bacillus cereus MM3]
Length = 219
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTNDGVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|228997359|ref|ZP_04156981.1| hypothetical protein bmyco0003_19410 [Bacillus mycoides Rock3-17]
gi|229004990|ref|ZP_04162717.1| hypothetical protein bmyco0002_19350 [Bacillus mycoides Rock1-4]
gi|228756338|gb|EEM05656.1| hypothetical protein bmyco0002_19350 [Bacillus mycoides Rock1-4]
gi|228762451|gb|EEM11376.1| hypothetical protein bmyco0003_19410 [Bacillus mycoides Rock3-17]
Length = 168
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 73/173 (42%), Gaps = 30/173 (17%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ +++LG PS +R+ + S + +I+SGG +
Sbjct: 18 NAPYVLILGAKLFGDK--------PSLSLQNRLDVALMYLNSHPET----KVIVSGGQGE 65
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E+ N L++ G+E + I +E +S T++N +FS + + ++VS+ YH
Sbjct: 66 DEDIPEAHSMRNYLIKHGIEENRIFIEDRSTSTYENLKFSMDL---YHVMHAVVVSNTYH 122
Query: 185 LKRSQLYFQHFG--INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
L R+++ + G + + A+ + + + ++EY I+
Sbjct: 123 LYRTKIIAKRLGMQMESLAAPTPRRSEKKAY-------------IREYAAIIK 162
>gi|315612721|ref|ZP_07887632.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
gi|315314831|gb|EFU62872.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
Length = 340
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 88/236 (37%), Gaps = 24/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + F+I++ + + + + F + I L Y L
Sbjct: 101 VILFFFVIMAIRVSDTKGLFYTNHLVNIIFFFLIYSYLIFGFAFAGFLL--YSILYLFIP 158
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KK + I++ G G + SRI + + Y + + II SGG
Sbjct: 159 KKKYYDFIIIHGAGLLNGEK-------VTPLLKSRIDKAVEAYHQ--SLNPNVKIISSGG 209
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-LV 179
++E+ N LLE V R+ I LE S T++N FS M + + V
Sbjct: 210 QGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTYENLLFSKEMGEKLVASPRFLFV 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + G+ +A +Y+ ++EYI + +
Sbjct: 270 TNDYHVFRTSTYARRIGMKGDGLGC-----------RTAAYYIPSAFIREYIALCV 314
>gi|332653075|ref|ZP_08418820.1| hypothetical protein HMPREF0866_00773 [Ruminococcaceae bacterium
D16]
gi|332518221|gb|EGJ47824.1| hypothetical protein HMPREF0866_00773 [Ruminococcaceae bacterium
D16]
Length = 205
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 84/226 (37%), Gaps = 34/226 (15%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q R + + +L G+ ++ D ++++LG
Sbjct: 7 KQPRRWLKILLALVLAGILCFAGLFGAVMYG----------AYDHVSGDPQVMIILGCRV 56
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
EPS R+ + T+++SGG +E+ +
Sbjct: 57 MPG-------GEPSILLQDRLDTALDYLDDHP----DITVVVSGGQGSNEPTSEAACMAD 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII----LVSSAYHLKRSQLYF 192
L E GV+ D I LE +S +T +N +S +++ +VS+ +HL RS++
Sbjct: 106 YLEEHGVDPDQILLEDKSSNTKENLIYSRELLEEQGVDVGEGGVLVVSNGFHLTRSRMLA 165
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ FG L A + IP ++ ++E + ++ +++
Sbjct: 166 ERFGYGH----VSTLAAPTTHIPS-----RIQMYIREPLALVKSFF 202
>gi|227513619|ref|ZP_03943668.1| integral membrane protein [Lactobacillus buchneri ATCC 11577]
gi|227083135|gb|EEI18447.1| integral membrane protein [Lactobacillus buchneri ATCC 11577]
Length = 351
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 94/264 (35%), Gaps = 47/264 (17%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI---------FFMSCFMLLFSF-----------IGWGI 40
++ S++FL ++ + + R + + + F F
Sbjct: 78 LIFSFVFLFINAYFAWKREGRSLSSSLTLILGIGVILVDIFFLFDPINAPKPIQNFITMF 137
Query: 41 IPTILLKHLQFSYQRPLLSPQ-----WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ + L + + K D + I++LG+G + +
Sbjct: 138 LTLFIFYILLTVWNTMVSMIVYNLYFPKYDKDYIIVLGSGLIDG-------YKVGRLLGN 190
Query: 96 RIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
RI + + Y K+ S H +I SGG + E + L+ GV D +E +S
Sbjct: 191 RINKGIEFYHLQLKKTSKHAKLIFSGGQGGDEKIPEGVAMKKYALDQGVPETDTLVEDKS 250
Query: 155 LDTFQNAQFSSSMIKN---MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
++T QN FS +IKN I+ V++ +H R + GI +
Sbjct: 251 INTRQNLIFSDRIIKNDSGRDDSKIVFVTNNFHTLRGGILAGKLGIPATEIGA------- 303
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
+ +YL ++EY+ + +
Sbjct: 304 ----KTPFYYLPNAVIREYLALFV 323
>gi|228921749|ref|ZP_04085066.1| hypothetical protein bthur0011_27460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228953412|ref|ZP_04115458.1| hypothetical protein bthur0006_27920 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229070559|ref|ZP_04203799.1| hypothetical protein bcere0025_27430 [Bacillus cereus F65185]
gi|229080263|ref|ZP_04212790.1| hypothetical protein bcere0023_29110 [Bacillus cereus Rock4-2]
gi|229179370|ref|ZP_04306724.1| hypothetical protein bcere0005_27200 [Bacillus cereus 172560W]
gi|229191184|ref|ZP_04318173.1| hypothetical protein bcere0002_28480 [Bacillus cereus ATCC 10876]
gi|228592334|gb|EEK50164.1| hypothetical protein bcere0002_28480 [Bacillus cereus ATCC 10876]
gi|228604268|gb|EEK61735.1| hypothetical protein bcere0005_27200 [Bacillus cereus 172560W]
gi|228703158|gb|EEL55617.1| hypothetical protein bcere0023_29110 [Bacillus cereus Rock4-2]
gi|228712574|gb|EEL64509.1| hypothetical protein bcere0025_27430 [Bacillus cereus F65185]
gi|228806309|gb|EEM52882.1| hypothetical protein bthur0006_27920 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228837961|gb|EEM83285.1| hypothetical protein bthur0011_27460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 219
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLGAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|30021189|ref|NP_832820.1| EpiH/GdmH-related protein [Bacillus cereus ATCC 14579]
gi|30263055|ref|NP_845432.1| hypothetical protein BA_3106 [Bacillus anthracis str. Ames]
gi|47528398|ref|YP_019747.1| hypothetical protein GBAA_3106 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185896|ref|YP_029148.1| hypothetical protein BAS2890 [Bacillus anthracis str. Sterne]
gi|49479533|ref|YP_037182.1| hypothetical protein BT9727_2858 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|165868915|ref|ZP_02213575.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167632539|ref|ZP_02390866.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167637429|ref|ZP_02395709.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170685113|ref|ZP_02876338.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170704915|ref|ZP_02895380.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177650000|ref|ZP_02933001.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190564854|ref|ZP_03017775.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196032544|ref|ZP_03099958.1| conserved hypothetical protein [Bacillus cereus W]
gi|196038177|ref|ZP_03105487.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196042737|ref|ZP_03109976.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|218232485|ref|YP_002367802.1| hypothetical protein BCB4264_A3095 [Bacillus cereus B4264]
gi|218904226|ref|YP_002452060.1| hypothetical protein BCAH820_3110 [Bacillus cereus AH820]
gi|225865058|ref|YP_002750436.1| hypothetical protein BCA_3166 [Bacillus cereus 03BB102]
gi|227814096|ref|YP_002814105.1| hypothetical protein BAMEG_1503 [Bacillus anthracis str. CDC 684]
gi|229600823|ref|YP_002867325.1| hypothetical protein BAA_3156 [Bacillus anthracis str. A0248]
gi|254685645|ref|ZP_05149504.1| hypothetical protein BantC_17565 [Bacillus anthracis str.
CNEVA-9066]
gi|254723056|ref|ZP_05184844.1| hypothetical protein BantA1_11354 [Bacillus anthracis str. A1055]
gi|254738109|ref|ZP_05195812.1| hypothetical protein BantWNA_23369 [Bacillus anthracis str. Western
North America USA6153]
gi|254742718|ref|ZP_05200403.1| hypothetical protein BantKB_17177 [Bacillus anthracis str. Kruger
B]
gi|254752426|ref|ZP_05204462.1| hypothetical protein BantV_08161 [Bacillus anthracis str. Vollum]
gi|254760943|ref|ZP_05212967.1| hypothetical protein BantA9_21746 [Bacillus anthracis str.
Australia 94]
gi|296503616|ref|YP_003665316.1| EpiH/GdmH-related protein [Bacillus thuringiensis BMB171]
gi|300118019|ref|ZP_07055768.1| hypothetical protein BCSJ1_08918 [Bacillus cereus SJ1]
gi|301054601|ref|YP_003792812.1| hypothetical protein BACI_c30540 [Bacillus anthracis CI]
gi|29896743|gb|AAP10021.1| EpiH/GdmH-related protein [Bacillus cereus ATCC 14579]
gi|30257688|gb|AAP26918.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47503546|gb|AAT32222.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179823|gb|AAT55199.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49331089|gb|AAT61735.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164715641|gb|EDR21158.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167514936|gb|EDR90302.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167532837|gb|EDR95473.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170129770|gb|EDS98632.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170671373|gb|EDT22111.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172083952|gb|EDT69011.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190564171|gb|EDV18135.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195995295|gb|EDX59249.1| conserved hypothetical protein [Bacillus cereus W]
gi|196026221|gb|EDX64889.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196031447|gb|EDX70044.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|218160442|gb|ACK60434.1| conserved hypothetical protein [Bacillus cereus B4264]
gi|218536393|gb|ACK88791.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786516|gb|ACO26733.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|227003379|gb|ACP13122.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229265231|gb|ACQ46868.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|296324668|gb|ADH07596.1| EpiH/GdmH-related protein [Bacillus thuringiensis BMB171]
gi|298724604|gb|EFI65297.1| hypothetical protein BCSJ1_08918 [Bacillus cereus SJ1]
gi|300376770|gb|ADK05674.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 210
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 6 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 198
>gi|168205486|ref|ZP_02631491.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
gi|170663020|gb|EDT15703.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
Length = 257
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/250 (16%), Positives = 99/250 (39%), Gaps = 39/250 (15%)
Query: 1 MLLSWIFLIVSYW---HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
++L + ++ + + L Q +K++ + L + I+ ++ +
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKKVYKPIKTLALICISIFIIVEGAIIFY--------- 88
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ K + IV+LG G + R+ +T+ + + I+
Sbjct: 89 -PKKSLKPCDYIVVLGAGIRGE--------NLTATLRDRLDKTIEYLEK---TGFNGEIV 136
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-----NMQ 172
+SGG + E+ L+E+GV +D I LE ++ T++N +S +I+ ++
Sbjct: 137 VSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIESLSGKPIK 196
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+I++V++ +H RS L + G + + + ++P +E+
Sbjct: 197 DLDILVVTTDFHAMRSNLLAKRNGYDNVDLYTS--KTQWYLVPSMYA--------REFFA 246
Query: 233 ILIAYYRGNR 242
+Y+ R
Sbjct: 247 FCKSYFLDKR 256
>gi|23308921|ref|NP_601474.2| hypothetical protein NCgl2194 [Corynebacterium glutamicum ATCC
13032]
gi|21325045|dbj|BAB99667.1| Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032]
Length = 225
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 25/187 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+P + + I++LG PS Q +R+ +L++ + +
Sbjct: 29 TPNNRHKIDSILVLGTA--------QYDGVPSRQFAARLRHAAKLWRLHEIQH----VYT 76
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GG E+ V L++ GV+ D I + + S + + +++
Sbjct: 77 VGGKLPGDRFTEAEVAREYLIKEGVDPDLIFVSA----VGNDTVSSYEALDPEKLGRVLI 132
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA-- 236
V+ H R+ + G + K S + Y A P F E+ G+++
Sbjct: 133 VTDPNHSYRAVRIARRMGFDAKPSPTTYSPAK---FPSIVYFLTLS---HEWGGVVVQDV 186
Query: 237 -YYRGNR 242
G R
Sbjct: 187 SRLLGER 193
>gi|317489670|ref|ZP_07948174.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|316911264|gb|EFV32869.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
Length = 218
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 67/216 (31%), Gaps = 29/216 (13%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ C +++ + + TI + D + IV+LG
Sbjct: 7 LMLGCMLVVVAVFAATNVATIAT----TKDRIVEPQSAVGFDADAIVVLGASVFAD---- 58
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS R+ + + LYK +I GD E V + + GV
Sbjct: 59 ---GTPSGILRDRLDDGIALYKEGVAPK-----LIMSGDNSTVSYNEVQVMKDYAISQGV 110
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
DI + T+++ + + + + + YHL R+ Q G+ +
Sbjct: 111 PSHDIFCDHAGFSTYESMYRAKHVFGAERIV---VATQTYHLYRALYAAQGLGLESLGVA 167
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SDY + L+E +++
Sbjct: 168 SDYH----------DYSKQLQYDLREIPARTKDFFK 193
>gi|226954131|ref|ZP_03824595.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226835172|gb|EEH67555.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 373
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 75/195 (38%), Gaps = 20/195 (10%)
Query: 49 LQFSYQRPLLSPQWKKDGN--IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS 106
L+ + K IV+LG G T+ I + + R+ T+ + K
Sbjct: 188 LESKKNKQDDHGDLKDTNQPYAIVVLGGGLTLGAN--GKDIVVNNYTRLRLERTLEVEKQ 245
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
+ I++SG E+ L E G+ LE +S++T +N +FSS
Sbjct: 246 Y-----NLPIVLSG--------VEAPYMQAWLEERGI--KAKLLENRSMNTCENTRFSSL 290
Query: 167 MIKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
+++ G +I ++ YH+ R++ F GI T + S P N+ +
Sbjct: 291 LLQKKGGAPKVIFITDEYHMPRTRRLFALNGIETVPVVAPMPTKLTSWRPSEKNYDHSRR 350
Query: 226 ALKEYIGILIAYYRG 240
A E + + G
Sbjct: 351 ANYELLATIRDVLFG 365
>gi|302560768|ref|ZP_07313110.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
gi|302478386|gb|EFL41479.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length = 233
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 61/202 (30%), Gaps = 24/202 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R++ + + + + + L + + V+ G G
Sbjct: 18 WRRLVQGVVTVCVLALLPATWLRLATDDRL--------RTTADVPRAEVAVVFGAGLW-- 67
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
EPS R+ LY++ + +++ GD + E L
Sbjct: 68 ------DGEPSPYLAHRLDAAAELYRAGRIE-----VVLVTGDNSREEYDEPDAMRAYLT 116
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + DT+ + + + +L+S +H++R+ + G+++
Sbjct: 117 RHGVPGSRIVSDYAGFDTWDSCVRAKKIFG---VDRAVLISQGFHIRRAVALCETAGVSS 173
Query: 200 KASCSDYLNAYYSIIPLSANFY 221
D + +
Sbjct: 174 YGVGVDDRHDVTWYYGTVRELF 195
>gi|251796623|ref|YP_003011354.1| hypothetical protein Pjdr2_2614 [Paenibacillus sp. JDR-2]
gi|247544249|gb|ACT01268.1| protein of unknown function DUF218 [Paenibacillus sp. JDR-2]
Length = 219
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 71/219 (32%), Gaps = 28/219 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R + F+ L +G +L L SY + + + ++LG
Sbjct: 11 SRKRRGLLLFRLFVGL-CLLGVLCCGYLLW--LINSY----DDSKPIEQADAAIVLGASL 63
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PA++ R+ +LYK K + + + D L E+
Sbjct: 64 WSDKPSPALK--------ERLDFADKLYKDGKVNMFILSGGL---DRNGSKLTEAQGMKA 112
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
LL G+ D + L+ + T++N S + +++V+ YH R+ ++
Sbjct: 113 YLLAKGIPADKMLLDNAARSTYENLLNSKVIAAEHGLNKLLVVTHDYHAPRAMEMARYLD 172
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + + S +E +
Sbjct: 173 YENVTAAAFHSEVLSPFKNQS----------REVLAYAK 201
>gi|218898164|ref|YP_002446575.1| hypothetical protein BCG9842_B2141 [Bacillus cereus G9842]
gi|218541554|gb|ACK93948.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 210
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 75/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 6 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LY++ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYRNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIHTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 198
>gi|145296228|ref|YP_001139049.1| hypothetical protein cgR_2145 [Corynebacterium glutamicum R]
gi|140846148|dbj|BAF55147.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 225
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 25/187 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+P + + I++LG PS Q +R+ +L++ + +
Sbjct: 29 TPNNRHRIDSILVLG--------TAQYDGVPSRQFAARLRHAAKLWRLHEIQH----VYT 76
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GG E+ V L++ GV+ D I + + S + + +++
Sbjct: 77 VGGKLPGDRFTEAEVAREYLIKEGVDPDLIF----ASAVGNDTVSSYEALDPEKLGRVLI 132
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA-- 236
V+ H R+ + G + K S + Y A P F E+ G+++
Sbjct: 133 VTDPNHSYRAVRIARRMGFDAKPSPTTYSPAK---FPSIVYFLTLS---HEWGGVVVQDV 186
Query: 237 -YYRGNR 242
+ G R
Sbjct: 187 SWLLGER 193
>gi|331698228|ref|YP_004334467.1| hypothetical protein Psed_4458 [Pseudonocardia dioxanivorans
CB1190]
gi|326952917|gb|AEA26614.1| protein of unknown function DUF218 [Pseudonocardia dioxanivorans
CB1190]
Length = 205
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 66/222 (29%), Gaps = 30/222 (13%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +I + + +G + + + +++LG
Sbjct: 2 RWPLRIVLGGVLVAVIIVVGTAF------RVWET------ARTDHDTPADAVIVLGAA-- 47
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS +R+ LY+ I+ GG+ E+
Sbjct: 48 ------QYDGNPSPIFAARLDHAAALYRQGLA----PRIVTVGGNRAGDEYTEASAGRRY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
LL GV + + DT + Q +++ + ILVS +H R++ + G+
Sbjct: 98 LLAKGVPAAAVVAVGEGSDTLASLQAVAAVARTGGWHTAILVSDPWHSLRARTMAEDSGL 157
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ S + S + ++E +L
Sbjct: 158 DAWTSPTRSGPVVQSRETQARY------IVRETGALLFYRIT 193
>gi|167465736|ref|ZP_02330825.1| hypothetical protein Plarl_24758 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381937|ref|ZP_08055887.1| hypothetical protein PL1_0708 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154077|gb|EFX46405.1| hypothetical protein PL1_0708 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 233
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 71/210 (33%), Gaps = 32/210 (15%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+L + + W LL P + + ++LG P +
Sbjct: 4 AVFLGILLAGLLWTFYVQWLLSR--------QDYPALPEGVDTGIVLGAKLETNQASPGL 55
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R+ + + LY K + + + E+ N L++ G+
Sbjct: 56 --------AERLDQAISLYNQRKFKHLIVSG--GLDKEGDSQITEAEGMRNYLVQKGIPE 105
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I +E Q+ +T++N FS +++ + I+++ YH R+ D
Sbjct: 106 QAITMEKQAKNTYENLVFSKRIMEQKGWTSCIIITHEYHGARAMDIA------------D 153
Query: 206 YLNAYYSIIPLSAN--FYLTELALKEYIGI 233
++ + + + + ++ ++E +
Sbjct: 154 FIALSPAYLSTTDSTHLFMPYHKIREILAF 183
>gi|325830373|ref|ZP_08163830.1| hypothetical protein HMPREF9404_3217 [Eggerthella sp. HGA1]
gi|325487840|gb|EGC90278.1| hypothetical protein HMPREF9404_3217 [Eggerthella sp. HGA1]
Length = 236
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 70/233 (30%), Gaps = 29/233 (12%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK----DG 66
L +K ++ + L ++ ++ + + D
Sbjct: 4 LLSSTLMTRRKKHGWLKTMLGLMLGCMLVVVAVFAATNVATIATTKDRIVEPQAAVGFDA 63
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG PS R+ + + LYK +I GD
Sbjct: 64 DAIVVLGASVFAD-------GTPSGILRDRLDDGIALYKEGVAPK-----LIMSGDNSTV 111
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E V + + GV DI + T+++ + + + + + YHL
Sbjct: 112 SYNEVQVMKDYAISQGVPSYDIFCDHAGFSTYESMYRAKHVFGAERIV---VATQTYHLY 168
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ Q G+ + SDY + L+E +++
Sbjct: 169 RALYAAQGLGLESLGVASDYH----------DYSKQLQYDLREIPARTKDFFK 211
>gi|251779259|ref|ZP_04822179.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243083574|gb|EES49464.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 253
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 19/203 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + + + + +H + + + F L F I L+ L
Sbjct: 32 LPIFILGITLVLYHFIKSRLAFNRYFIKFNKLMRFF----ICIGLVLFLSIEVVIISCPK 87
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K++ + IV+LG G + S+ SR+ ++ + + II+SG
Sbjct: 88 SNKENTDYIVVLGAGLNNGD-------QLSYILKSRLDSVLQCINE---FNNNSYIIVSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKN 175
G ++E++ LLE G+ D I +E QS +TF+N ++S +I+ +
Sbjct: 138 GKGNDERISEAMAMKKYLLEQGISEDKILMEDQSKNTFENFKYSKKLIEEHSNKNIDDLS 197
Query: 176 IILVSSAYHLKRSQLYFQHFGIN 198
+ +V++ +H RS++ + G N
Sbjct: 198 VKIVTTDFHGFRSKMLAKRNGYN 220
>gi|152975455|ref|YP_001374972.1| hypothetical protein Bcer98_1670 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024207|gb|ABS21977.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 185
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 81/214 (37%), Gaps = 35/214 (16%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ C + L + I + R + + + I++LG
Sbjct: 4 WIVCLLFLLPILYILYITYQM---------RKVAQKEVSNEIPYILILGAKLFGDK---- 50
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
PS +R+ ++ + I+SGG + + E+ N L+ G+
Sbjct: 51 ----PSQSLQNRLDVALKYLNENPKT----KAIVSGGQGEDEDIPEAHSMRNYLVAHGIN 102
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I +E +S T++N +FS + + I+VS+ YHL R+++ + GI +A +
Sbjct: 103 ANRILIEDRSTSTYENLKFSKDLF---HITHAIIVSNTYHLYRTKIIAKRLGIKMEALAA 159
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + ++EYI I+
Sbjct: 160 -----------STPARSKNKAYIREYIAIIKTLL 182
>gi|229085219|ref|ZP_04217462.1| hypothetical protein bcere0022_18350 [Bacillus cereus Rock3-44]
gi|228698086|gb|EEL50828.1| hypothetical protein bcere0022_18350 [Bacillus cereus Rock3-44]
Length = 185
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 83/208 (39%), Gaps = 34/208 (16%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L + + + + + + + + + +++LG P
Sbjct: 4 WILLVILLFPPLCMMYMTY----RMKKVAYEKVSDHAPYVLILGAKLFGDK--------P 51
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S +R+ + S + +I+SGG + + E+ N L++ G+E I
Sbjct: 52 SLSLQNRLDVALMYVNSHPE----AKVIVSGGQGEDEDIPEAHSMRNYLIQHGIEEGRIF 107
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG--INTKASCSDYL 207
+E +S T++N +FS + K+ ++VS+ YHL R+++ + G + + A+ +
Sbjct: 108 IEDRSTSTYENLKFSMDL---YHVKHAVVVSNTYHLYRTKIIAKRLGMQMESLAAPTPRR 164
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILI 235
+ + ++EY I+
Sbjct: 165 SKKKAY-------------IREYAAIIK 179
>gi|47564233|ref|ZP_00235278.1| EpiH/GdmH-related protein [Bacillus cereus G9241]
gi|47558385|gb|EAL16708.1| EpiH/GdmH-related protein [Bacillus cereus G9241]
Length = 210
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R++F + M+ + + + + + ++LG +
Sbjct: 6 KSKKRRVFQVFLLMICSAILYVSYAAYDIWSY--------RFKTDDSVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 198
>gi|326940847|gb|AEA16743.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 210
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 6 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LY++ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYRNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 198
>gi|294616357|ref|ZP_06696150.1| integral membrane protein [Enterococcus faecium E1636]
gi|291590871|gb|EFF22587.1| integral membrane protein [Enterococcus faecium E1636]
Length = 399
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 88/222 (39%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y++ + +++ I++ G + E+I
Sbjct: 228 LINGET-------VSPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+ G+ DI +ET S T +N +S ++ S+ YH+ R+ LY
Sbjct: 281 KQYAMGQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + +A +YL L+EYI IL
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 371
>gi|294650259|ref|ZP_06727628.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292823851|gb|EFF82685.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 373
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 18/174 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I + + R+ T+ + K + I++SG
Sbjct: 209 AIVVLGGGLTLGAN--GKDIVVNNYTRLRLERTLEVEKQY-----NLPIVLSG------- 254
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLK 186
E+ L E G+ LE +S++T +N +FSS +++ G +IL++ YH+
Sbjct: 255 -VEAPYMQAWLEERGI--KAKLLENRSMNTCENTRFSSLLLQKKGGAPKVILITDEYHMP 311
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R++ F GI T + S P N+ + A E + + G
Sbjct: 312 RTRRLFALNGIETVPVVAPMPTKLTSWRPSEKNYDHSRRANYELLATIRDVLFG 365
>gi|309799013|ref|ZP_07693269.1| integral membrane protein [Streptococcus infantis SK1302]
gi|308117363|gb|EFO54783.1| integral membrane protein [Streptococcus infantis SK1302]
Length = 313
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 88/239 (36%), Gaps = 24/239 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMS--CFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+LL + LI R F + +LF FI + Y L
Sbjct: 69 LLLGIVILIFLALVSFRMGGRNELFYTNHFLNILFVFIAYSYFIFGFAFAGFMIYSILYL 128
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
KK + I++ G G + RI + + Y K II
Sbjct: 129 FIPKKKPYDFIIIHGAGLLGGEK-------VTPLLKRRIDKAVEAYHQSKNPH--IKIIA 179
Query: 119 SGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNI 176
SGG ++E+ N L+ E+ V +D I LE QS T++N +S + + M
Sbjct: 180 SGGQGTDEKISEAQAIANYLVTETDVPQDVIILEYQSRTTYENLLYSKEIGEKMVADPQF 239
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ V++ YH+ R+ Y + + + +A +Y+ ++EY+ + +
Sbjct: 240 LFVTNDYHVFRTSTYARKLKMK-----------GDDLGCRTAGYYIPSAFIREYVALCV 287
>gi|221066959|ref|ZP_03543064.1| protein of unknown function DUF218 [Comamonas testosteroni KF-1]
gi|220711982|gb|EED67350.1| protein of unknown function DUF218 [Comamonas testosteroni KF-1]
Length = 270
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 82/242 (33%), Gaps = 36/242 (14%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
SW + V +W +++ ++ L I LSPQ
Sbjct: 58 SWKWRAVQHWRAARPLHARLWSLAWAGLALWLISLFWF--------WSRLSGLGLSPQQV 109
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
IV+LG+GT + P +R+ + +L + Q + + GG
Sbjct: 110 PPVQSIVVLGSGT--------LDGHPRPVLAARLDQAAQLARLQPQ----ALVAVCGGVD 157
Query: 124 QKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNIILV 179
+E+ V L + + + LE S T N + S ++ + +V
Sbjct: 158 WGEKESEAEVMARYLQQRHGIAAQRLVLEKLSTSTELNLKLSRPLLAERGVAADAPMAMV 217
Query: 180 SSAYHLKRSQLYFQHFGIN-TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SS +HL R+ + + +D PL+ F L+EY + ++
Sbjct: 218 SSDFHLMRAMDIAKRQDLPQVYPVAAD--------TPLATRFNAW---LREYFAMASSWL 266
Query: 239 RG 240
G
Sbjct: 267 LG 268
>gi|229817491|ref|ZP_04447773.1| hypothetical protein BIFANG_02754 [Bifidobacterium angulatum DSM
20098]
gi|229785280|gb|EEP21394.1| hypothetical protein BIFANG_02754 [Bifidobacterium angulatum DSM
20098]
Length = 253
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 81/243 (33%), Gaps = 37/243 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSI---RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
++++ +F+ + + + +L I +G + ++
Sbjct: 43 IVIACVFVAAGLAVWFGWWKALPKVVRRVCAVVLCTGLICFGAVEGWVISG--------- 93
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ + + +++LG + PS R+ + + +S I
Sbjct: 94 MRAAGEPGLDYVIVLGAQVH--------KTRPSLVLQYRLDKAIDYLESNPNTIC----I 141
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG E+ L G+ I E++S DT QN S ++ +I
Sbjct: 142 VSGGKGANEPFPEAQGMAEYLERHGIAASRIIRESKSKDTRQNIANSRRLMTKRN-ASIG 200
Query: 178 LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+++S +H+ R+ + G+ N + S L L+E+ L
Sbjct: 201 IITSDFHVARAMQIARDQGLANAQGIASGSPGD-----------MLVNNMLREFFAELKY 249
Query: 237 YYR 239
+
Sbjct: 250 LVK 252
>gi|323524387|ref|YP_004226540.1| hypothetical protein BC1001_0013 [Burkholderia sp. CCGE1001]
gi|323381389|gb|ADX53480.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 186
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 77/208 (37%), Gaps = 27/208 (12%)
Query: 34 SFIGWG--IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
I + L L + L P + +I ++ GN PS
Sbjct: 1 MLISILKWVAAVWLTTSLIVASIGLLFKP---QKSDIAIVFGNQVHAD-------GSPSS 50
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ +R+ + Y + H I G K G E+ + L++ G+ ++ I ++
Sbjct: 51 RLSARLDRARQCYDNGLCHQ-----IFVSGGIDKQGTDEARAMEDYLVKRGIPKERIVMD 105
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
LDT+ + +S+ ++ K+ ++V+ +H+ R+ L + FGIN A
Sbjct: 106 NMGLDTWDTVRNASAYMQTHHLKSALVVTQYFHVPRAALALRRFGINHVA---------- 155
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYR 239
P A++E I+ R
Sbjct: 156 GSYPQFFEIRDIYSAIRETPAIIWYCVR 183
>gi|170760763|ref|YP_001786003.1| putative sanA protein [Clostridium botulinum A3 str. Loch Maree]
gi|169407752|gb|ACA56163.1| putative SanA protein [Clostridium botulinum A3 str. Loch Maree]
Length = 222
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 73/195 (37%), Gaps = 19/195 (9%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ +++I + ++L I ++ Y ++P+ + I++LG
Sbjct: 1 MKNKMKRILTVIMVIVLMGTAAIFFI-DFRVRSESKKYI---VNPKDVPEAEAILVLGAY 56
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ R+ + LYK+ K ++ GD + E
Sbjct: 57 VKPN-------GKLCDMLEDRVAVGIDLYKNNKAKK-----LLFSGDHGQVNYDEVNGMK 104
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ GV+++DI L+ T+++ + + K + I+V+ YHL R+ +
Sbjct: 105 KVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKAKKI---IIVTQQYHLMRAVYIARQL 161
Query: 196 GINTKASCSDYLNAY 210
G++ SD N +
Sbjct: 162 GLDAYGVNSDQRNYW 176
>gi|269968233|ref|ZP_06182262.1| SanA protein [Vibrio alginolyticus 40B]
gi|269827156|gb|EEZ81461.1| SanA protein [Vibrio alginolyticus 40B]
Length = 244
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/234 (14%), Positives = 73/234 (31%), Gaps = 27/234 (11%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+F + L S ++ + L + I ++ + + +
Sbjct: 1 MLFSRIRSKWKLKFSWKRFALILSISALSLLVSVIAIDRWVVLQAK---ESIFTEYEQIP 57
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ V+LG I + RI + LY K + GD
Sbjct: 58 QHEVAVVLGTSKYIGKI-------LNTYYTHRINAAIELYNQGKVKQFLLS-----GDNA 105
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E LL++GV + I L+ T + + + + + ++V+ +H
Sbjct: 106 HRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFH 162
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+R+ + I+ + A N T + ++E + + A+
Sbjct: 163 CERALFIADAYSIDAQCLAVAGPTA---------NKQKTSMRVRELLARVKAFL 207
>gi|229824214|ref|ZP_04450283.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
gi|229786568|gb|EEP22682.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
Length = 341
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMS-CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ L F ++ Y + ++ F +++ +G I +L + F
Sbjct: 101 LALMLAFGMIGYMVIWPILANRLSLNWPIFNVIYGLMGSTIFYFAVLVGIFFVTNILNFI 160
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K + IV+LG G P + SRI + ++L++ Q T+I+S
Sbjct: 161 HFVKPRYSYIVVLGAGLNGTEVTPLL--------ASRIDKAIKLWRRRPQ---DVTLIMS 209
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG ++E L GV + I ++ QS +T +N FS +++ + ++ ++V
Sbjct: 210 GGQGPDEVISEGEAMKAYALRQGVPQSAILVDNQSRNTHENLLFSYKLMEKGR-EDFVIV 268
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ YHL RS + + G+ + + + ++ L+E+IG L +R
Sbjct: 269 TNYYHLLRSLILARRLGLKCQGYGA-----------KTKLYFSINAFLREFIGYLTLAWR 317
>gi|206969158|ref|ZP_03230113.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206736199|gb|EDZ53357.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 210
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 6 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 198
>gi|306825708|ref|ZP_07459047.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432069|gb|EFM35046.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 340
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 88/236 (37%), Gaps = 24/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + F+I++ + + + + F + I L Y L
Sbjct: 101 VILFFFVIMAVRVSDTKGLFYTNHLVNIIFFFLIYSYLIFGFAFAGFLL--YSILYLFIP 158
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KK + I++ G G + SRI + + Y + + II SGG
Sbjct: 159 KKKYYDFIIIHGAGLLNGEK-------VTPLLKSRIDKAVEAYHQ--SLNPNVKIIASGG 209
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-LV 179
++E+ N LLE V R+ I LE S T++N FS M + + V
Sbjct: 210 RGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTYENLLFSKEMGEKLVASPRFLFV 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + G+ +A +Y+ ++EYI + +
Sbjct: 270 TNDYHVFRTSTYARRIGMKGDGLGC-----------RTAAYYIPSAFIREYIALCV 314
>gi|126737417|ref|ZP_01753152.1| hypothetical protein RSK20926_13319 [Roseobacter sp. SK209-2-6]
gi|126722002|gb|EBA18705.1| hypothetical protein RSK20926_13319 [Roseobacter sp. SK209-2-6]
Length = 197
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 75/193 (38%), Gaps = 22/193 (11%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ + I ++LG E S R + L+K+ K
Sbjct: 21 DQFGINDETWNAGPTMTIAIILGAAVWPG-------GEASPTLRRRTLHGVALFKAGK-- 71
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ +I G KH +E+ V L G+ D I LE +S T +N + ++I++
Sbjct: 72 ---ISQLICSGGLGKHPPSEAAVMREICLAEGLPTDAILLEDRSHSTLENLTNAKALIED 128
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINT-KASCSDYLNAYYSIIPLSANFYLTELALKE 229
+ +I++V+ YH R+ L +H G+ T + S ++ ++ L+E
Sbjct: 129 PETTDIVIVTDHYHKWRALLTARHLGLRTRVSCPSTTGTTWHRVLKSW---------LRE 179
Query: 230 YIGILIAYYRGNR 242
+ Y+R R
Sbjct: 180 IPALAYYYWRLKR 192
>gi|328882308|emb|CCA55547.1| SanA protein [Streptomyces venezuelae ATCC 10712]
Length = 238
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 58/187 (31%), Gaps = 16/187 (8%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
++ + + + L + ++ V+ G G P+ R+
Sbjct: 28 VLALAPVTWMHTAAAGKLRTTADVPARDVAVVFGAGLWNG--------RPTPYLAHRLDT 79
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
LY+S K +++ GD + E L GV I + DT+
Sbjct: 80 AAELYRSGK-----VRVLLVTGDNSRTAYDEPSAMRAYLTARGVPDTRIVSDYAGFDTWD 134
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
+ + + +LV+ +H+KR+ G+++ + +
Sbjct: 135 SCVRARKVFG---VDRAVLVTQDFHIKRAVALCGRAGVDSYGVGVPEPHDRTWYYGTTRE 191
Query: 220 FYLTELA 226
+ A
Sbjct: 192 LFAAGKA 198
>gi|297199506|ref|ZP_06916903.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
gi|197712947|gb|EDY56981.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length = 228
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 24/195 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R++ + + + + + L + + V+ G G
Sbjct: 18 RRRLVQAVMAGCVLALLPSTWMYVVTGDRL--------RTTADVPRTEVAVVFGAGLW-- 67
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
EPS R+ +LY+ + +++ GD + E L
Sbjct: 68 ------DGEPSPYLAHRLDAAAKLYRENRIE-----VVLVTGDNSREDYDEPDAMRAYLT 116
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + DT+ + + + Q +L+S +H++R+ Q G+ +
Sbjct: 117 RHGVPDTRIVSDYAGFDTWDSCVRARKIFGVHQ---AVLISQGFHIRRAVALCQAAGVTS 173
Query: 200 KASCSDYLNAYYSII 214
D +
Sbjct: 174 YGIGVDARHDATWYY 188
>gi|118478405|ref|YP_895556.1| hypothetical protein BALH_2770 [Bacillus thuringiensis str. Al
Hakam]
gi|118417630|gb|ABK86049.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 225
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 70/188 (37%), Gaps = 20/188 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++LG +
Sbjct: 21 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLGAAS 72
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 73 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 120
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 121 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 180
Query: 197 INTKASCS 204
I AS +
Sbjct: 181 IEAYASPT 188
>gi|257883084|ref|ZP_05662737.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257818742|gb|EEV46070.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
Length = 368
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 30/222 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVY 134
T S RI + + Y++ + +++ I++ G + E+I
Sbjct: 197 LINGET-------VSPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + +A +YL L+EYI IL
Sbjct: 310 WQAKLKANGIGA-----------KTAFYYLPNAFLREYIAIL 340
>gi|50843568|ref|YP_056795.1| OmpA family membrane associated protein [Propionibacterium acnes
KPA171202]
gi|50841170|gb|AAT83837.1| conserved membrane-associated protein (OmpA family)
[Propionibacterium acnes KPA171202]
Length = 228
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 61/200 (30%), Gaps = 24/200 (12%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
IR +C + +G + L + + ++ ++LG
Sbjct: 14 RRHPIRTAIVSTCIAAFVALLGPWTLAAALSYG-------KVHDVADTEPRDVAIVLGAQ 66
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS R+ LY+S K +I+ GD ++ E V
Sbjct: 67 V-------LPSGTPSAYLRGRLDVAADLYRSGKA-----KVILVSGDNRETHYNEPKVMK 114
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L+ GV I + L T+ + + I+V+ YH R+ +
Sbjct: 115 TYLVSKGVPAARIVEDFAGLGTYDTCVRARRIFG---VDRAIMVTQDYHEIRTVATCRMT 171
Query: 196 GINTKASC--SDYLNAYYSI 213
G++ + + +
Sbjct: 172 GLDAVGVPDRTQPRDNVWWY 191
>gi|262038052|ref|ZP_06011458.1| GdmH [Leptotrichia goodfellowii F0264]
gi|261747919|gb|EEY35352.1| GdmH [Leptotrichia goodfellowii F0264]
Length = 214
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 84/214 (39%), Gaps = 30/214 (14%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
FI + P I+++ L S + K + +V+LG PS
Sbjct: 22 IFIVIFLFPFIIIQLLTIS-EMKKEKDGKDKKVDYVVVLGGRVRGEK--------PSRSL 72
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
Y RI + + + ++ SGG + ++E+ +L++ G+ + I E +
Sbjct: 73 YKRIEKAAE----YLKEHENIKVVASGGKGKGEEISEAEAIKRELVKLGISENRIITEDK 128
Query: 154 SLDTFQNAQFSSSMIKNMQGKNII------LVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
S++T +N +F+ IK + +N +V++ YH+ RS+ + G +
Sbjct: 129 SVNTMENFKFTLEKIKENESENKEKKFKILIVTNDYHVYRSRKIAELLGFEAYGLGAK-- 186
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+P S ++E I+ Y+ N
Sbjct: 187 -TPLISLPKSY--------IRESASIIKYYFTKN 211
>gi|291548174|emb|CBL21282.1| Uncharacterized conserved protein [Ruminococcus sp. SR1/5]
Length = 160
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 27/181 (14%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
KK+ + I++LG + R + + ++SGG
Sbjct: 4 KKNLDYIIVLGAHVDG--------TRMTLALLERARRALLYLEENP----GTKAVLSGGK 51
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ L G++ D + E +S T +N +FS I ++ +V++
Sbjct: 52 GDGENISEAEAMYRYLTCHGIDGDRLIREEESTSTKENLEFSCRKIGT-TDCSVGVVTNN 110
Query: 183 YHLKRSQLYFQHFGI-NTKASCSDYLNAYYS-IIPLSANFYLTELALKEYIGILIAYYRG 240
+H+ R + G S Y + IP +E + I+ G
Sbjct: 111 FHVWRGAAIARKCGFREVAMVPSRYRSWRLFIYIP------------REILAIIKDKLMG 158
Query: 241 N 241
N
Sbjct: 159 N 159
>gi|167757814|ref|ZP_02429941.1| hypothetical protein CLOSCI_00145 [Clostridium scindens ATCC 35704]
gi|167664468|gb|EDS08598.1| hypothetical protein CLOSCI_00145 [Clostridium scindens ATCC 35704]
Length = 196
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 18/207 (8%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
L + L L F + + V+ G PS
Sbjct: 8 LLWITLGFAAANLALFGLMFRKPKKRWEQDA---YDCAVVCGCQVGAD-------GTPSK 57
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ +R+ + + L+K K +I G + AE+ +E GV + I E
Sbjct: 58 RLAARVEKAVELWKDKK-----VKYLIMSGAAVYNAFAEAPAMKRYAVELGVPEEYILEE 112
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
Q++ T+ N ++S M+++ K+ ++V++ +HL+++ Y + G+ + S
Sbjct: 113 KQAVSTYHNLLYASQMMEHCGFKDCVVVTNGWHLRKADHYARKAGVKYVMAASK-RPEGD 171
Query: 212 SIIPLSANFYLTELALKEYIGILIAYY 238
S++ + T + Y+ + YY
Sbjct: 172 SLLTTIGLYLKTN--IHMYVNMWKGYY 196
>gi|153826664|ref|ZP_01979331.1| sanA protein [Vibrio cholerae MZO-2]
gi|149739526|gb|EDM53754.1| sanA protein [Vibrio cholerae MZO-2]
Length = 254
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 70/230 (30%), Gaps = 28/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + HL R++ ++ + G I + Q + Q
Sbjct: 14 VVFSALAHLRRLPWRRLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPF 70
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 QVAVVLGTSKYIGKTLNEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHR 118
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL +G+ ++I L+ T + + + +++ +H +
Sbjct: 119 SYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCE 175
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
R+ ++ I P +N ++ L+E A
Sbjct: 176 RALFIARYQDIQASCLAV----------PGPSNHSGFKVRLREVFARAYA 215
>gi|332969923|gb|EGK08925.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 189
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 77/210 (36%), Gaps = 25/210 (11%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L+ +G GI + L ++LG PA++
Sbjct: 4 WLIAIAMGAGIAGSFGCL-LWIRVSSFDGKRLLPIPRQGAIVLGTALEDHRPSPALQ--- 59
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
R+ + ++LY+ I+I G + E+ V L+E GV + D+
Sbjct: 60 -----ERMDQALKLYQRG-----LAPILILSGGSPRGTTPEARVMKEYLVERGVRKRDLI 109
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
LE +S +T +N S ++ + +++ LV+ +H+ R+ + ++ +
Sbjct: 110 LEDRSTNTAENLVRSGELLLSHGIRDVYLVTHDFHMYRALRCARRAQLSVTPAPV----- 164
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + ++ +E + ++ Y
Sbjct: 165 ------ATRSLWIPYHKARECLALVKDYVT 188
>gi|299538217|ref|ZP_07051502.1| putative cytoplasmic protein [Lysinibacillus fusiformis ZC1]
gi|298726419|gb|EFI67009.1| putative cytoplasmic protein [Lysinibacillus fusiformis ZC1]
Length = 186
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 73/203 (35%), Gaps = 23/203 (11%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
I I+L + P+ + +++LG PS SR+
Sbjct: 6 ILIGSGIVLYTWLGKEIDQGMEPKADGSADYMIILGAKVRPG-------GVPSLSLKSRL 58
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ +I+SGG E+ V + L + G++ I +E QS T
Sbjct: 59 EVAVPYLTKYPH----VKVIVSGGQGPDEDRTEASVMQDYLEQYGIDATRIIIEDQSTST 114
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
++N FS ++ + K I +VS+ +HLKR++ + + +
Sbjct: 115 YENLVFSKDLL-PKETKKITIVSNDFHLKRAKYLAESLDFEVDVLSARTPKSVE------ 167
Query: 218 ANFYLTELALKEYIGILIAYYRG 240
+L ++E +L Y G
Sbjct: 168 -----AKLRIRERAALLKTYIVG 185
>gi|256375178|ref|YP_003098838.1| hypothetical protein Amir_1036 [Actinosynnema mirum DSM 43827]
gi|255919481|gb|ACU34992.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 248
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 64/195 (32%), Gaps = 24/195 (12%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+Q + L+ + + ++LG G P+ R+ LY
Sbjct: 55 WAWVQATSAPYRLTAAEVPETPVALVLGAGIR--------DGRPTPFLAGRLDVAADLYH 106
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
K +++ GD + E N LL GV I + LDT+ + ++
Sbjct: 107 RGK-----VKVLLVSGDNSRPDYDEPTAMRNYLLRQGVPDSAIVSDYAGLDTWDSCARAN 161
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
+ + +V+ +HL R+ + GI D A S
Sbjct: 162 RIFG---VTSATVVTQRFHLPRAVALCRAAGIEAYGVGHDTWGARTS--------TTLYG 210
Query: 226 ALKEYIGILIAYYRG 240
+E + + A++ G
Sbjct: 211 YFRESVASVKAFWDG 225
>gi|149188918|ref|ZP_01867208.1| SanA protein [Vibrio shilonii AK1]
gi|148837338|gb|EDL54285.1| SanA protein [Vibrio shilonii AK1]
Length = 241
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 64/219 (29%), Gaps = 28/219 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ ++C+ L+ + I + + L S + + V+LG +
Sbjct: 19 LKRALRIACYTLVLFVVFIASIDRWVSWQAEDR---ILTSIDDIDNVQVAVVLGTSKYLG 75
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
T+ RI + LY K + GD E LL
Sbjct: 76 RTLNEYYSH-------RIEAAIDLYNEGKVSHFLLS-----GDNAHRSYNEPWTMKRDLL 123
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ V I L+ T + + + +++ +H +R+ + + IN
Sbjct: 124 RAEVPEPAIHLDYAGFRTLDSIVRAKKIFDTDDFL---IITQKFHCERALFIARSYDINA 180
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + L+E A+
Sbjct: 181 TCLAVSGPTSKSGF----------SVRLREVFARTKAFL 209
>gi|296133679|ref|YP_003640926.1| protein of unknown function DUF218 [Thermincola sp. JR]
gi|296032257|gb|ADG83025.1| protein of unknown function DUF218 [Thermincola potens JR]
Length = 202
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 17/207 (8%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+++ F G+ I+ L L PL+ + + IV+L G +
Sbjct: 8 LVITLFTGFLIL---LYTPLIQYAASPLIVKDPLQKADAIVVLSGG-------WKAKGVL 57
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ R ++L+ Q II SGG+ + + L G + +
Sbjct: 58 GTSTLERYQYGIKLF----QKKFAPVIIFSGGNLLGRPAEADAMADMALSA-GFPYEAVI 112
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
E S T++N F++ +++ + K+IILV+S YH R++ F+ + A+ N
Sbjct: 113 SENASASTYENVLFTTKILQEKRLKSIILVTSPYHTYRAKKMFEDKQVKVTAAPV--PNG 170
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L + + EY +L+
Sbjct: 171 EFEKANGLERLKLAKNIVLEYGKLLVY 197
>gi|332992233|gb|AEF02288.1| hypothetical protein ambt_03690 [Alteromonas sp. SN2]
Length = 250
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/248 (18%), Positives = 87/248 (35%), Gaps = 20/248 (8%)
Query: 2 LLSWI--FLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLL 58
L I F W L + M L + +I+L L+F +
Sbjct: 15 PLCLITAFSAAGLWLLYSSKLNSAKLMISITFLSLVIFSQSWVSSIILYPLEFGF---TD 71
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + I ++P I + S R+ + L + + II+
Sbjct: 72 ESEQLETPEFIWTPACYYATNGSVPEI-SRWNECSLQRLLQAKILSEQHQ-----IPIIL 125
Query: 119 SGGDPQ-KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+GG+ + +I L+ G+ D I + + TF +++ ++ I+
Sbjct: 126 TGGNFLLDETVNYAIKAQELLISLGMSADGIVILNEGTSTFTE---INALKRSFADVKIL 182
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGI 233
V+SA H KR + I K D+ ++ + +P +++ A EY+ +
Sbjct: 183 AVTSATHQKRVAIMLADANIQAKVKGVDFKSSGELKPFVTMPSASSLDNIRKAFYEYMAL 242
Query: 234 LIAYYRGN 241
L GN
Sbjct: 243 LKYLIFGN 250
>gi|291166939|gb|EFE28985.1| membrane protein [Filifactor alocis ATCC 35896]
Length = 198
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 82/223 (36%), Gaps = 35/223 (15%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ F+ +L+F + I IL S + + +++LG
Sbjct: 2 KKTILTFLKIGLLIFGISFFTIEGAILFSG---------FSTSHDEQIDYVIILGARLYG 52
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS +R+ + ++I++GG E+ + L
Sbjct: 53 --------TTPSPALTNRLNSALTYLNEHPST----SVIVTGGQGTDEDCTEAQASYDYL 100
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV---SSAYHLKRSQLYFQHF 195
+ G+ ++ I +ET S TF+N + ++ +I+ + V ++ +H R++L +
Sbjct: 101 VAHGIAKNRILMETTSTTTFENIRNATDIIRKQTDNPSVKVLISTNRFHCIRAELLAKRC 160
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G+ + S IP L+EY I+ +++
Sbjct: 161 GLTAYSLPS--KTPPSITIPC---------YLREYFAIIKSFF 192
>gi|293611000|ref|ZP_06693299.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826652|gb|EFF85018.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 261
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 32/246 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + + L + + FF + GW L+ L + + +
Sbjct: 36 VIPLILGAFLCLYSLFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFSFIKENK 94
Query: 61 Q---WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
I++LG+G +PS R+ L +Q I+
Sbjct: 95 DTSNNIPPVKAIIVLGSGVENG--------QPSTILAKRLDTAAALALKQQQ----AQIV 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---G 173
++GG +E++V + L + + RD + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKESEALVMSRYLEQKYHIARDQMILEDKSTSTELNLKNSKPLLEQHHITLD 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFG-INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ I +V+S +H+ R+ + G I ++ PL+ + L+EY
Sbjct: 203 QPIAIVTSDFHIPRAIAIAKKQGYIQVYGVAAE--------TPLATRYNAW---LREYFA 251
Query: 233 ILIAYY 238
+
Sbjct: 252 YASGWL 257
>gi|262370433|ref|ZP_06063759.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262314775|gb|EEY95816.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 370
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
N IV+LG G T+ I + + + R+ T+++ + K I++SG
Sbjct: 204 PNAIVVLGGGLTLDKNRKDIVV--NEYTRLRLETTLQVEQQFK-----LPIVLSG----- 251
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYH 184
E+ L GV+ LE +S++T +N++FSS +++ G +IL++ YH
Sbjct: 252 ---VEAPYMQRWLKARGVDAK--LLEDRSMNTCENSRFSSLLLQKKGGAPRVILITDQYH 306
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ R++ F GI T+ + P N+ + A E + + G
Sbjct: 307 MPRTRRLFALNGIETQPIEAPMPTQLTQWRPSEQNYDHSRRANYEMLATIRDVLVG 362
>gi|15893732|ref|NP_347081.1| hypothetical protein CA_C0441 [Clostridium acetobutylicum ATCC 824]
gi|15023296|gb|AAK78421.1|AE007558_11 Uncharacterized conserved membrane protein of SANA family
[Clostridium acetobutylicum ATCC 824]
gi|325507855|gb|ADZ19491.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
Length = 259
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 89/236 (37%), Gaps = 31/236 (13%)
Query: 1 MLLSWIFLIVSYWHLL-----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
M+L + ++ ++ + KI ++ + + +L+ + Q Y
Sbjct: 42 MILGILCILFGIFYKKHEIKAGSRLSKIDKCIKGIVCAICVVFIFTEAVLVYNGQSEY-- 99
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
K + I++LG G Y R+ + K
Sbjct: 100 -------KGKLDYIIVLGAGLRGK--------HMLGTQYERVKKAAEYVKENP----DVK 140
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK---NMQ 172
I++SGG ++E+ L G + D I +E +S +TF+N + S +++ N +
Sbjct: 141 IVVSGGKGNGEDISEAEAMKQYFLNKGFKNDSIIMEDKSKNTFENLRNSKKILEKISNKK 200
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGIN--TKASCSDYLNAYYSIIPLSANFYLTELA 226
+ +V+S+YH+ R++L + G+ + + L S FY + +
Sbjct: 201 EIRVGVVTSSYHITRAKLLGKRVGLKLYAIPAPINKLLLLQSYTREFFAFYKSIIF 256
>gi|228959326|ref|ZP_04121021.1| hypothetical protein bthur0005_28140 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228800396|gb|EEM47318.1| hypothetical protein bthur0005_28140 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 219
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 75/220 (34%), Gaps = 27/220 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+IF + M+ + + + + + ++L +
Sbjct: 15 KSKKRRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKANDDVKTDAGIVLSAAS 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 67 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I AS + + Y + KE +
Sbjct: 175 IEAYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGY 207
>gi|86140156|ref|ZP_01058718.1| hypothetical protein MED193_11777 [Roseobacter sp. MED193]
gi|85823093|gb|EAQ43306.1| hypothetical protein MED193_11777 [Roseobacter sp. MED193]
Length = 164
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 69/173 (39%), Gaps = 26/173 (15%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG PS R + +L++ + +I G +H +
Sbjct: 5 VVLGAAVWPG-------GRPSPTLRRRCLQAAKLFRRGRVSH-----VICCGGLGQHPPS 52
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ V E+GV I LE QS T +N +++ + NI+LV+ YH R+
Sbjct: 53 EAEVMRQICREAGVPDSAILLEDQSRTTLENLANIRALLARLDQPNIVLVTDRYHKWRAL 112
Query: 190 LYFQHFGINTK---ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HFG + SD ++ F + + L+E ++ ++R
Sbjct: 113 MVARHFGFQAQASCPPPSD-----------TSRFRVLKSWLREAPALIYYWWR 154
>gi|299531045|ref|ZP_07044458.1| hypothetical protein CTS44_09677 [Comamonas testosteroni S44]
gi|298721002|gb|EFI61946.1| hypothetical protein CTS44_09677 [Comamonas testosteroni S44]
Length = 268
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 83/242 (34%), Gaps = 34/242 (14%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
LSW + V +W ++++ + +L I L+PQ
Sbjct: 55 LSWKWRSVQHWRASRPLNQRLWSLGWVVLALWLISLFWF--------WSRLSGLGLAPQQ 106
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
IV+LG+GT + P +R+ + +L K Q + + GG
Sbjct: 107 VPPVQSIVVLGSGT--------LDGHPRPVLAARLEQAAQLAKLQPQAF----VAVCGGV 154
Query: 123 PQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNIIL 178
+E+ V L + + + LE S T N + S ++ + +
Sbjct: 155 DWGEKESEAEVMARYLQQHHGIAAQRLVLEKLSTSTELNLKLSRPLLAERGVAADAPMAM 214
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
VSS +HL R+ + + + PL+ F L+EY + ++
Sbjct: 215 VSSDFHLMRAMDIAKRQDL-PQVYPVAAPT------PLATRFNAW---LREYFAMASSWL 264
Query: 239 RG 240
G
Sbjct: 265 LG 266
>gi|78045108|ref|YP_360909.1| hypothetical protein CHY_2090 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77997223|gb|ABB16122.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 203
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 86/220 (39%), Gaps = 24/220 (10%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ IF L+F W L + PL + + + +V+L G T
Sbjct: 4 KKIIFAFFGLTLIFLIAAWFF-------PLNYYLALPLTIKENPQPADAVVVLSGGLT-- 54
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + + R+ + L+ + + ++ G ++ + + L
Sbjct: 55 -----KKGDLGESTRERLNLGINLW-----KNDYGRYLLLSGGSFTREPKDASLMAKEAL 104
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV + LE+ S +T++N ++++ + K I++V+SAYH R + + G+N
Sbjct: 105 KKGVPAPALLLESSSENTYENVLLTANIYYQNRWKRILVVTSAYHTLRVKKMYNDRGVNA 164
Query: 200 -KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ L ++ T + ++EY+ +L +
Sbjct: 165 TVVYPAGELPNARGLL----RLRQTIVVVEEYLKLLYYFI 200
>gi|229060751|ref|ZP_04198106.1| hypothetical protein bcere0026_28450 [Bacillus cereus AH603]
gi|228718398|gb|EEL70030.1| hypothetical protein bcere0026_28450 [Bacillus cereus AH603]
Length = 210
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 77/221 (34%), Gaps = 30/221 (13%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I + M+ + + + + ++LG +
Sbjct: 6 KSKKRRILQVFLLMICSIILYVSYAAYDIWSY--------RFKTDDDVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YALKHGVKEEDILIETKSLFTEENLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIK 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKE---YIGIL 234
I AS + + Y + KE YIG +
Sbjct: 166 IEAYASPT--PTSAYKTLDT-----EIPFFFKELCSYIGYV 199
>gi|318060469|ref|ZP_07979192.1| integral membrane protein [Streptomyces sp. SA3_actG]
Length = 262
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 34/220 (15%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + R+ + + + + + I + + + + + V+
Sbjct: 23 WPRTRRGQRRALWAVVGLCVLALLPSAWI--------RVASDGGVRAEADVGRAPVAVVF 74
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G PS R+ RLY + + T ++ GD + E
Sbjct: 75 GAGLWDGK--------PSPYLAHRLDAAARLYAAGR-----VTAVLVTGDNSRTSYDEPT 121
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L +GV R + + DT+ + + + +LVS +H++R+
Sbjct: 122 AMRDYLARAGVPRRQVVRDYAGFDTWDSCVRAHRVFG---VDRAVLVSQGFHIRRAVALC 178
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ GI+ + + + A++E +
Sbjct: 179 RAAGIDAQGVAARDPHDVTWY----------YGAIRELLA 208
>gi|303242994|ref|ZP_07329449.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
gi|302589462|gb|EFL59255.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
Length = 263
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 91/243 (37%), Gaps = 35/243 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLF-----SFIGWGIIPTILLKHLQFSYQR 55
++ + + V + L + K + I II IL++ L F+
Sbjct: 38 LIFTLLAGTVLTIYSLLKLKGKFSISKIQNIFLRRSIKIGISAFIISFILIEGLIFA--- 94
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ D + +++LG G ++ R+ + + K
Sbjct: 95 -TVRADNYTDVDYVIILGGGVKGGELSKTLQF--------RLDKGIEFLKEHP----DLK 141
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-- 173
++++GG ++E N LL++ + D I +E+++ T +N +++ +++ G
Sbjct: 142 VVVTGGKGFGETISEGEAMCNYLLQNNIPEDKIIVESEATSTMENFKYTKQILEKQTGKS 201
Query: 174 -KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+++++S +H+ RS++ G S + + P ++EY
Sbjct: 202 NYKVMVITSDFHMLRSKILASFNGFTPYGIPSK---TWIGVFP--------NCVIREYFA 250
Query: 233 ILI 235
+
Sbjct: 251 VFK 253
>gi|15641199|ref|NP_230831.1| sanA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|153823229|ref|ZP_01975896.1| sanA protein [Vibrio cholerae B33]
gi|227081358|ref|YP_002809909.1| sanA protein [Vibrio cholerae M66-2]
gi|229505220|ref|ZP_04394730.1| SanA protein [Vibrio cholerae BX 330286]
gi|229511110|ref|ZP_04400589.1| SanA protein [Vibrio cholerae B33]
gi|229518229|ref|ZP_04407673.1| SanA protein [Vibrio cholerae RC9]
gi|229529726|ref|ZP_04419116.1| SanA protein [Vibrio cholerae 12129(1)]
gi|229608239|ref|YP_002878887.1| SanA protein [Vibrio cholerae MJ-1236]
gi|254226711|ref|ZP_04920288.1| sanA protein [Vibrio cholerae V51]
gi|254848312|ref|ZP_05237662.1| sanA protein [Vibrio cholerae MO10]
gi|255745594|ref|ZP_05419542.1| SanA protein [Vibrio cholera CIRS 101]
gi|262158332|ref|ZP_06029448.1| SanA protein [Vibrio cholerae INDRE 91/1]
gi|298498712|ref|ZP_07008519.1| sanA protein [Vibrio cholerae MAK 757]
gi|9655663|gb|AAF94345.1| sanA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|125620772|gb|EAZ49129.1| sanA protein [Vibrio cholerae V51]
gi|126519243|gb|EAZ76466.1| sanA protein [Vibrio cholerae B33]
gi|227009246|gb|ACP05458.1| sanA protein [Vibrio cholerae M66-2]
gi|229333500|gb|EEN98986.1| SanA protein [Vibrio cholerae 12129(1)]
gi|229344944|gb|EEO09918.1| SanA protein [Vibrio cholerae RC9]
gi|229351075|gb|EEO16016.1| SanA protein [Vibrio cholerae B33]
gi|229357443|gb|EEO22360.1| SanA protein [Vibrio cholerae BX 330286]
gi|229370894|gb|ACQ61317.1| SanA protein [Vibrio cholerae MJ-1236]
gi|254844017|gb|EET22431.1| sanA protein [Vibrio cholerae MO10]
gi|255736669|gb|EET92066.1| SanA protein [Vibrio cholera CIRS 101]
gi|262029773|gb|EEY48421.1| SanA protein [Vibrio cholerae INDRE 91/1]
gi|297543045|gb|EFH79095.1| sanA protein [Vibrio cholerae MAK 757]
gi|327483886|gb|AEA78293.1| SanA protein [Vibrio cholerae LMA3894-4]
Length = 254
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/230 (15%), Positives = 70/230 (30%), Gaps = 28/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + HL RK+ ++ + G I + Q + Q
Sbjct: 14 VVFSALAHLRRLPWRKLSQTLLWLTIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPF 70
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 QVAVVLGTSKYIGKTLNEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHR 118
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL +G+ ++I L+ T + + + +++ +H +
Sbjct: 119 SYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCE 175
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
R+ ++ I P +N ++ L+E A
Sbjct: 176 RALFIARYQDIQASCLAV----------PGPSNHSGFKVRLREVFARAYA 215
>gi|227893937|ref|ZP_04011742.1| membrane protein [Lactobacillus ultunensis DSM 16047]
gi|227864241|gb|EEJ71662.1| membrane protein [Lactobacillus ultunensis DSM 16047]
Length = 350
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 80/205 (39%), Gaps = 28/205 (13%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+ + + +I +++ L Q + +V+LG G P +
Sbjct: 149 VFLTLVILYLITIMMMFTLTSWINLVNWHVQHL---DYVVVLGAGIMGKTVTPLL----- 200
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
SRI + +Y +I+SGG + E+ + +GV + DI +
Sbjct: 201 ---ASRISRGIEIYHKNP----GSKLIMSGGQGPGEDIPEAEAMAEYAMNAGVPKADIII 253
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S T +N +FS +++K +V+S+YH+ R+ + + G+ +
Sbjct: 254 ENKSRTTNENLRFSHALMKP--DSKFCIVTSSYHVYRALVLAKRQGLKCIGYGA------ 305
Query: 211 YSIIPLSANFYLTELALKEYIGILI 235
+ ++ ++E+I L+
Sbjct: 306 -----KTKWYFTLNAFVREFIAYLV 325
>gi|257790208|ref|YP_003180814.1| hypothetical protein Elen_0438 [Eggerthella lenta DSM 2243]
gi|257474105|gb|ACV54425.1| protein of unknown function DUF218 [Eggerthella lenta DSM 2243]
Length = 215
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 29/216 (13%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ C +++ + + TI + D + IV+LG
Sbjct: 4 LMLGCMLVVVAVFAATNVATIAT----TKDRIVEPQAAVGFDADAIVVLGASVFAD---- 55
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS R+ + + LYK +I GD E V + + GV
Sbjct: 56 ---GTPSGILRDRLDDGIALYKEGVAPK-----LIMSGDNSTVSYNEVQVMKDYAISQGV 107
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
DI + T+++ + + + + + YHL R+ Q G+++
Sbjct: 108 PSYDIFCDHAGFSTYESMYRAKHVFGAERIV---VATQTYHLYRALYAAQGLGLDSLGVA 164
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SDY + L+E +++
Sbjct: 165 SDYH----------DYSKQLQYDLREIPARTKDFFK 190
>gi|260174422|ref|ZP_05760834.1| putative protein involved in barrier function of the cell envelope
[Bacteroides sp. D2]
gi|315922690|ref|ZP_07918930.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696565|gb|EFS33400.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 211
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 27/219 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
RK+ + + + + I I+ +K + + N+ +LLG
Sbjct: 2 KRKLLYTTLIIAILCVISI-IVCNRTIKK--HTVSKLYTEVNTIPSNNVGLLLGT----- 53
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + RI T+ LYK+ K I+ GD +K E L+
Sbjct: 54 -SPKLKNGNNNLYFDYRILATVELYKAGK-----IKYILISGDNRKEDYNEPEEMKKALM 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ G+ I L+ T + + + ++S +H +R+ + GI+
Sbjct: 108 QKGIPEKSIYLDYAGFRTLDSVVRAKEVFGQNHLT---IISQRFHNERAIYLAEKNGIDA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ P + + ++E + + +
Sbjct: 165 IGYNA----------PNVNAYAGLKTNIRELLARVKMFI 193
>gi|257085374|ref|ZP_05579735.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256993404|gb|EEU80706.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 359
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P K + I
Sbjct: 129 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------KYTQDYI 179
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 180 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 232
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 233 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 292
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 293 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 333
>gi|323492448|ref|ZP_08097596.1| SanA protein [Vibrio brasiliensis LMG 20546]
gi|323313235|gb|EGA66351.1| SanA protein [Vibrio brasiliensis LMG 20546]
Length = 264
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 65/223 (29%), Gaps = 28/223 (12%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
I K+ + + ++ + + P+ + ++ V+LG
Sbjct: 14 WLGRILKLIAWLPVVFIALSASLFVVDRWISYQARHQ---VFTQPEQIEQFDVAVVLGTS 70
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ + RI + LY+ K + GD E
Sbjct: 71 KYLGKILNEYYTN-------RIDAAIELYEQGKVSHFLLS-----GDNAHRSYNEPWTMK 118
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
LL +G+ D I L+ T + + + ++S +H +R+
Sbjct: 119 RDLLRAGIPEDRIFLDYAGFRTLDSVVRAKEIFDTDNFL---IISQKFHCERALFIANSH 175
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I+ K + + + ++ ++E A+
Sbjct: 176 DIDAKCFAVAGPSRHSGL----------QVRVREVFARAKAFL 208
>gi|269219771|ref|ZP_06163625.1| protein SanA [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211013|gb|EEZ77353.1| protein SanA [Actinomyces sp. oral taxon 848 str. F0332]
Length = 377
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 70/221 (31%), Gaps = 26/221 (11%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++++ + +++ + + + + S P + I++LG
Sbjct: 154 RKKSLVKRLAKVCIAIVVTGALVFTGLNVYMTTSTDDSVVTVNSVPSE-AKADCILILGA 212
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS R+ + LY+ ++ GD E V
Sbjct: 213 SVRANRK-------PSPMLLKRLERGLELYRKKAAPK-----VLVSGDNATVAYNEVKVM 260
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L GV DI + T+++ + + K + +I+V+ YHL R+
Sbjct: 261 REWLQAKGVPPQDIFEDHAGFSTYESMYRARDVFKVKR---MIVVTQRYHLARAIYTGDA 317
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
G+ ++ + + ++E++ +
Sbjct: 318 LGLKVWGVAAN----------GNNYSGQIKRDMREWVARVK 348
>gi|258621650|ref|ZP_05716681.1| Protein sanA [Vibrio mimicus VM573]
gi|258585881|gb|EEW10599.1| Protein sanA [Vibrio mimicus VM573]
Length = 253
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 67/229 (29%), Gaps = 28/229 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ L C RK+ + ++ I + Q + Q
Sbjct: 14 VAFVAARLSCLPWRKLGQILLLSVIAVVSSLLAIDRWVTWQTQN---NIISDTQNTPPFQ 70
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 VAVVLGTSKYIGKTLNEYYTN-------RIDAAIVLYQQGKVRNFLLS-----GDNAHRS 118
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + +++ +H +R
Sbjct: 119 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKQIFDTDNFL---IITQRFHCER 175
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + I +++ ++ L+E A
Sbjct: 176 ALFIAHYQDIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 214
>gi|18310223|ref|NP_562157.1| hypothetical protein CPE1241 [Clostridium perfringens str. 13]
gi|18144902|dbj|BAB80947.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 257
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 100/247 (40%), Gaps = 33/247 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + ++ + + ++ + + + + I I I+++ Y + L P
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKTVYKPIKILALICISIF--IIVEGAIIFYPKKSLKP 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G + R+ +T+ + + I++SG
Sbjct: 96 -----CDYIVVLGAGIRGE--------NLTATLRDRLDKTIEYLEK---TGFNGEIVVSG 139
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKN 175
G + E+ L+E+GV +D I LE ++ T++N +S +I+N+ + +
Sbjct: 140 GQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKDLD 199
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I+++++ +H RS L + G N + + ++P +E+
Sbjct: 200 ILVITTDFHAMRSNLLAKRNGYNNVDLYTS--KTQWYLVPSMYA--------REFFAFCK 249
Query: 236 AYYRGNR 242
+Y+ R
Sbjct: 250 SYFLDKR 256
>gi|256375410|ref|YP_003099070.1| hypothetical protein Amir_1272 [Actinosynnema mirum DSM 43827]
gi|255919713|gb|ACU35224.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 212
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 70/229 (30%), Gaps = 30/229 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
++ L + +++ ++L G + + ++
Sbjct: 1 MTLLARLRRYVQRTLLGGIAIVLIVTGGTTF------------RVWQVARDDDRTHADMA 48
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG PS +R+ RLY+ + I+ +GG
Sbjct: 49 VVLGAA--------QYNGVPSDVLAARLEHARRLYEQ----DVVDYIVTTGGRQPGDNFT 96
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L E GV D + + DT + + + + ++VS +H R++
Sbjct: 97 EGEAGRIWLEERGVPADRVIEIGEGTDTLGSIKAVAVRAHERSLRTAVIVSDPWHSLRAR 156
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G++ S + + +E + ++ +
Sbjct: 157 TMAEDQGLDAWTSPTRSGPNVQTREMQLYYIR------RETMALMYYHL 199
>gi|326441038|ref|ZP_08215772.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
Length = 204
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 52/150 (34%), Gaps = 16/150 (10%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
R + + + ++ ++ G G + P+ R+ LY+ K
Sbjct: 20 RHVHAAEDVPAQDVALVFGAGLW--------QGRPTPYLAHRLDTAADLYRRGK-----V 66
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+I+ GD + E L+ GV I + D++ + + +
Sbjct: 67 KVILVTGDNSREEYDEPDAMRTYLVGRGVPERRIVSDHAGFDSWDSCVRAKEIFG---VD 123
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+LVS +H++R+ + GI +
Sbjct: 124 RAVLVSQGFHIRRAVALCRTAGIESYGVGV 153
>gi|163940818|ref|YP_001645702.1| hypothetical protein BcerKBAB4_2882 [Bacillus weihenstephanensis
KBAB4]
gi|229133982|ref|ZP_04262803.1| hypothetical protein bcere0014_28980 [Bacillus cereus BDRD-ST196]
gi|163863015|gb|ABY44074.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
gi|228649475|gb|EEL05489.1| hypothetical protein bcere0014_28980 [Bacillus cereus BDRD-ST196]
Length = 210
Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 20/188 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I + M+ + + + + ++LG +
Sbjct: 6 KSKKRRILQVFLLMICSIILYVSYAAYDIWSY--------RFKTDDGVKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV+ +DI +ET+SL T N + + + + +VS H+KR+ +H
Sbjct: 106 YALKHGVKEEDILIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIK 165
Query: 197 INTKASCS 204
I AS +
Sbjct: 166 IEAYASPT 173
>gi|116334676|ref|YP_796203.1| hypothetical protein LVIS_2118 [Lactobacillus brevis ATCC 367]
gi|116100023|gb|ABJ65172.1| hypothetical protein LVIS_2118 [Lactobacillus brevis ATCC 367]
Length = 357
Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 45/244 (18%), Positives = 85/244 (34%), Gaps = 33/244 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF------FMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
ML ++ L + + F++ F L L + + +
Sbjct: 110 MLTLFLGLAILLAPFFSRWAALNLSKPVDTFINLFPSLVITYVLFWFYNYLTMLVLYQFN 169
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC-KQHSMH 113
RP + + + +++LG G E S RI + Y+ +
Sbjct: 170 RP------RYNQDFLIVLGAGLLNG-------NEVSPLLGRRIDRALTFYRKQLAKTGQA 216
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--M 171
+I SGG + E + + G+ + +E QS T++N FS +I
Sbjct: 217 PMVIFSGGQGGDETVPEGRAMRDYAIAHGLPAEQALVEDQSKTTYENMVFSKQLIAATGQ 276
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
Q + V++ YH R+ + + G+ + +A F+L L+EYI
Sbjct: 277 QRPRVTFVTNGYHTFRAGMIARKAGLKANGIGA-----------HTAKFFLPNAILREYI 325
Query: 232 GILI 235
I +
Sbjct: 326 AIFV 329
>gi|119026002|ref|YP_909847.1| hypothetical protein BAD_0984 [Bifidobacterium adolescentis ATCC
15703]
gi|118765586|dbj|BAF39765.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
Length = 250
Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 86/245 (35%), Gaps = 47/245 (19%)
Query: 1 MLLSWIFLIVSY------WHLLCQSIRKIFFMSCFMLLFSFIGW--GIIPTILLKHLQFS 52
++L+ +F +++ W L + IR + + +F II +
Sbjct: 41 LVLAVVFALLAIGIACHWWVALPRIIRGAIIAVVAIGIVAFCTIEGCIIGNM-------- 92
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ Q + D + +++LG A+R R+ T+ +
Sbjct: 93 ------NAQGEPDLDYVIVLGAQVRESGPSKALRY--------RLDRTIDYLEENPDTIC 138
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I+SGG AE+ + L + G+ + I E++S T +N S +++
Sbjct: 139 ----IVSGGQGHNEPFAEAQGMADYLQKHGIAENRIIQESKSESTMENIVNSKKLMRQEN 194
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGIN-TKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
++ +V++ +H+ R+ G+ + + L ++E+
Sbjct: 195 -ASVGIVTNDFHMFRALQIAHANGLKQAQGIATSSPKD-----------MLVNNMVREFF 242
Query: 232 GILIA 236
+
Sbjct: 243 AEIKF 247
>gi|169343962|ref|ZP_02864953.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|169297870|gb|EDS79965.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
Length = 262
Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 96/242 (39%), Gaps = 34/242 (14%)
Query: 1 MLLSWIFLIVSYW--HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
++L + ++ + + LL K + +L I II + Y + L
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKKVYKPIKILALICISIFIIVEGAIIF----YPKKSL 93
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + IV+LG G + R+ +T+ + I++
Sbjct: 94 KP-----CDYIVVLGAGIRGE--------NLTATLRDRLDKTIEYLEK---TGYDGEIVV 137
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QG 173
SGG + E+ L+E+GV +D I LE ++ T++N +S +I+N+ +
Sbjct: 138 SGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKD 197
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-----NFYLTELALK 228
+I++V++ +H RS L + G N + + ++P F + ++
Sbjct: 198 LDILVVTTDFHAMRSNLLAKRNGYNKAYLYTS--KTQWYLVPSMYAREFFAFCKSYFLIR 255
Query: 229 EY 230
E+
Sbjct: 256 EF 257
>gi|262165455|ref|ZP_06033192.1| SanA protein [Vibrio mimicus VM223]
gi|262025171|gb|EEY43839.1| SanA protein [Vibrio mimicus VM223]
Length = 253
Score = 71.7 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 67/229 (29%), Gaps = 28/229 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ L C RK+ + ++ I + Q + Q
Sbjct: 14 VAFVAARLSCLPWRKLGQILLLTVIAVVSSLLAIDRWVTWQTQN---NIISDTQNTPPFQ 70
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 VAVVLGTSKYIGKTLNEYYTN-------RIDAAIVLYQQGKVRNFLLS-----GDNAHRS 118
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + +++ +H +R
Sbjct: 119 YNEPWTMKRDLLRAGIPTENISLDYAGFRTLDSIVRAKQIFDTDNFL---IITQRFHCER 175
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + I +++ ++ L+E A
Sbjct: 176 ALFIAHYQEIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 214
>gi|269120634|ref|YP_003308811.1| hypothetical protein Sterm_2025 [Sebaldella termitidis ATCC 33386]
gi|268614512|gb|ACZ08880.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 216
Score = 71.7 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 18/184 (9%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K + +LL FIG I + + + + ++LG+
Sbjct: 2 KKVVIIFKILLVLFIGAVFINIYIQYS---TKKYIFSDVEEAPKTYTGLVLGSMVFDN-- 56
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS R+ +T LYK+ K I+ GD + E N LL+
Sbjct: 57 -----GTPSGVVRQRLDKTAELYKAGK-----IKRILVSGDHGQKNYDEVNSMKNYLLKK 106
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ +DI L+ DT+ + + + + ++I+++ +HL RS + G+N
Sbjct: 107 GIPIEDIFLDHAGFDTYSSMVRAKEIFE---IDDVIVITQKFHLPRSVYIARKKGMNAYG 163
Query: 202 SCSD 205
S+
Sbjct: 164 VVSN 167
>gi|228914883|ref|ZP_04078488.1| hypothetical protein bthur0012_21100 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228844679|gb|EEM89725.1| hypothetical protein bthur0012_21100 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 166
Score = 71.7 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S +I+SGG +
Sbjct: 19 YVLILGAKLFGDK--------PSLSLQNRLDVALEYLYSHP----DVKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDLYDVKH---AVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 124 TKIIAKRLGMKMEALAAETPMRSKR-----------KMYVREYAAIMK 160
>gi|237733730|ref|ZP_04564211.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229383068|gb|EEO33159.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 255
Score = 71.7 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 68/179 (37%), Gaps = 27/179 (15%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
++ ++ K + +++LG P +R R+ + ++ I
Sbjct: 93 EINNKYNKRSDFLIVLGARLYGDKPAPLLRY--------RLDAAVEYHQKFP----DVPI 140
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GK 174
I+SGG + E+ + L+ G++ I E +S +T +N +S +I+
Sbjct: 141 IVSGGQGHGENITEAKAMKDYLINKGIDESLIIEENKSTNTNENIIYSKKIIETSTTEDY 200
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY-LTELALKEYIG 232
++++++ +H RS+L G+ + N L+E+ G
Sbjct: 201 EVVIITNGFHCYRSKLLANKHGLEAHTYAA------------RENLDTAPHYYLREFFG 247
>gi|229488511|ref|ZP_04382377.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229324015|gb|EEN89770.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length = 235
Score = 71.7 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 30/215 (13%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R +++ +L + + G I I + + D ++++LG
Sbjct: 18 PRKRRWPRWVAGIAVLGAVVYAGSIVWISVASAGHT-----SDAADAPDAPVVIVLGAQI 72
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ ++ R+ + L ++ K ++ GD E N
Sbjct: 73 KDGKPMAFLKG--------RLDAAVELVEAGKA-----KAVLVSGDANGGSGDEIAAMTN 119
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E G++ I + LDT+ + ++V+ YH+ R+ + G
Sbjct: 120 YLVEQGIDARRIVGDPYGLDTYDTCFRAIHTYG---VTKALIVTQGYHVPRAVALCRDVG 176
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
I+ SD A ++I +A +E++
Sbjct: 177 IDADGVNSDCGCATPTLIKNAA---------REWV 202
>gi|209522662|ref|ZP_03271220.1| protein of unknown function DUF218 [Arthrospira maxima CS-328]
gi|209496711|gb|EDZ97008.1| protein of unknown function DUF218 [Arthrospira maxima CS-328]
Length = 229
Score = 71.7 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 76/217 (35%), Gaps = 23/217 (10%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + +L+ S IG + P +L L + R D + ++ G G
Sbjct: 14 KWLILHWRLLLVLSVIGGLLTPFVLNLYINLITQTRRYTEIADVPDKPVAIVFGAGLWAD 73
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P+ RI + LYK + I+ GD E + +
Sbjct: 74 -------GTPTPMLADRIQGAIDLYKLGRVEK-----ILMTGDNGTPEYNEVVAMQLYAI 121
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV +DI+L+ T+++ + + + +L++ YHL R+ GI+
Sbjct: 122 DQGVPANDIRLDYAGFSTYESCYRAREIFG---IETAVLITQQYHLPRAVYICNRLGIDA 178
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + S FY +E + ++ A
Sbjct: 179 IGFGT---PDWGKFRDDSMRFYTR----RELLAVVKA 208
>gi|315652448|ref|ZP_07905435.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485286|gb|EFU75681.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 365
Score = 71.7 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 97/248 (39%), Gaps = 34/248 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIF---------FMSCFMLLFSFIGWGIIPT-ILLKHLQF 51
+LS F I ++ + ++ + L++ + + I L+
Sbjct: 106 ILSLAFSISLVIYIFVWPLFRLKSLTNVYEKPLLLIADLVYKMLSFIFIYLLFLMAMYCI 165
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
S L+ K + I++LG G P + RI + + L +++
Sbjct: 166 SAILNLIHIGRNKKLDYIIVLGAGIKGKRVTPLL--------AGRIDKGIELL----KYN 213
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+ +I+SGG + E + + + GV + I +E +S +T +N FS +I N
Sbjct: 214 PNAKLILSGGMGPGEDIPEGVAMADYAKQKGVSDEKIIIEDKSKNTKENLLFSYKLIDNK 273
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
I +V+++YH+ R+ ++ + I S + ++ ++EYI
Sbjct: 274 N-SKIAIVTTSYHVFRALVFAKKLNIPCIGYGS-----------KTKWYFTLNALIREYI 321
Query: 232 GILIAYYR 239
G L YR
Sbjct: 322 GYLSISYR 329
>gi|119486244|ref|ZP_01620303.1| hypothetical protein L8106_16359 [Lyngbya sp. PCC 8106]
gi|119456457|gb|EAW37587.1| hypothetical protein L8106_16359 [Lyngbya sp. PCC 8106]
Length = 238
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 23/199 (11%)
Query: 41 IPTILLKHLQ-FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
P L +++ +Y R + + ++ G G P RI
Sbjct: 29 TPLALRSYVEASTYTRRYTNINQVPSKPVAIVFGAGVWED-------GTPMPMLADRIQG 81
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+ LY + I+ GD E I E G+ +DIKL+ T++
Sbjct: 82 AIDLYHLGRVRK-----ILMTGDNATPEYNEVIAMQYYAYEQGIPLEDIKLDYAGFSTYE 136
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
+ + + + +L++ YHL R+ GIN + + S
Sbjct: 137 SCYRAREIFG---IQQAVLITQQYHLSRAVYTCNQLGINAVGYGT---PDWGKYQDESMR 190
Query: 220 FYLTELALKEYIGILIAYY 238
FY +E + I+ A
Sbjct: 191 FYTQ----REMLAIIKALL 205
>gi|283456241|ref|YP_003360805.1| hypothetical protein BDP_1370 [Bifidobacterium dentium Bd1]
gi|283102875|gb|ADB09981.1| Conserved hypothetical protein [Bifidobacterium dentium Bd1]
Length = 208
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 80/240 (33%), Gaps = 37/240 (15%)
Query: 3 LSWIFLIVSYWHLLCQS---IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ +F + L R I + ++ + + +G + ++ +
Sbjct: 2 FAVLFEALGGGFLFHWWDAMPRLIRDILVALICIAVVAFGTVEGCIVSKMGAQ------- 54
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K + +++LG R PS R+ + + + I+S
Sbjct: 55 --GKPGLDYVIVLGAQVH--------RARPSRVLKFRLDKAIEYLNDNPKTIC----IVS 100
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG E+ + L +G+ I E++S T +N S +I + ++ ++
Sbjct: 101 GGQGSNEPFPEAQGMADYLKTNGIAESRIVEESKSKTTEENIINSKKLIADEN-ASVGII 159
Query: 180 SSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ +H+ R+ + G+ + + + L ++E+ +
Sbjct: 160 TNDFHVFRALQIARKNGLDDAQGIAAGSPPD-----------MLVNNMVREFFAEIKFLL 208
>gi|254254401|ref|ZP_04947718.1| hypothetical protein BDAG_03699 [Burkholderia dolosa AUO158]
gi|124899046|gb|EAY70889.1| hypothetical protein BDAG_03699 [Burkholderia dolosa AUO158]
Length = 204
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 20/176 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ ++ V+ G+ P +R+ + Y+S + C +I+ G
Sbjct: 26 EPADVAVIFGSALDDD-------GAPKPVLTARLDVGVHCYRSGR-----CPVILVSGGI 73
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
GL E+ + L+ GV D I ++ Q +T AQ + + ++ + +++VS Y
Sbjct: 74 DGPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYMRAHRMSRVLIVSQYY 133
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
HL R++L F+ GI Y P + + +E + R
Sbjct: 134 HLARARLAFERVGIEPSNIYVAY--------PRAFQLRDVYSSWREVPAYAVYAVR 181
>gi|153829633|ref|ZP_01982300.1| sanA protein [Vibrio cholerae 623-39]
gi|148874909|gb|EDL73044.1| sanA protein [Vibrio cholerae 623-39]
Length = 254
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 28/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + HL R++ ++ + G I + Q + Q
Sbjct: 14 VVFSALAHLRRLPWRRLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPF 70
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 QVAVVLGTSKYIGKTLNEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHR 118
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL +G+ ++I L+ T + + + +++ +H +
Sbjct: 119 SYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCE 175
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
R+ ++ I +++ ++ L+E A
Sbjct: 176 RALFIARYQDIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 215
>gi|293364947|ref|ZP_06611664.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|307703198|ref|ZP_07640144.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|291316397|gb|EFE56833.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|307623273|gb|EFO02264.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
Length = 340
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 87/236 (36%), Gaps = 24/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + F+I++ + + + F + I L Y L
Sbjct: 101 VILFFFVIMAIRVSDTNGLFYTNHLVNIIFFFLIYSYLIFGFAFAGFLL--YSILYLFIP 158
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KK + I++ G G + SRI + + Y + + II SGG
Sbjct: 159 KKKYYDFIIIHGAGLLNGEK-------VTPLLKSRIDKAVEAYHQ--SLNPNVKIIASGG 209
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-LV 179
++E+ N LLE V R+ I LE S T++N FS M + + V
Sbjct: 210 QGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTYENLLFSKEMGEKLVASPRFLFV 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + G+ +A +Y+ ++EYI + +
Sbjct: 270 TNDYHVFRTSTYARRIGMKGDGLGC-----------RTAAYYIPSAFIREYIALCV 314
>gi|262372717|ref|ZP_06065996.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262312742|gb|EEY93827.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 378
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 18/174 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I + + R+ +T+ + + I++SG
Sbjct: 214 AIVVLGGGLTLGAN--GKDIVVNNYTRLRLEKTLEI-----EKKYDLPIVLSG------- 259
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL-VSSAYHLK 186
E+ L E G+ + LE +S++T +N++FSS +++ G +L ++ YH+
Sbjct: 260 -VEAPYMQAWLNERGI--EAKLLEKRSMNTCENSRFSSLLLQKKGGAPTVLLITDEYHMP 316
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R++ F GI T + + P N+ + A E + + G
Sbjct: 317 RTRRLFALNGIETVPVIAPMPTQLTNWRPSEQNYDHSRRANYEMLATIRDMLFG 370
>gi|226355402|ref|YP_002785142.1| hypothetical protein Deide_05490 [Deinococcus deserti VCD115]
gi|226317392|gb|ACO45388.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 256
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/238 (15%), Positives = 82/238 (34%), Gaps = 12/238 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + +I R++ C +L G++ LL + + + L
Sbjct: 27 LVLLLIIAGAVAAWFPLTRRVMQAGCVVLA------GVLAVCLLTPVLRAPLQALTLAGS 80
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++IV+LG G A S +R+ + L+++ +M +
Sbjct: 81 PVPADVIVVLGGGVQCGTRAQA------PSSAARLVRGLELWRAGYAPAMTVSEPSGLIG 134
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P + ++ ++ T A + ++ + ++LV+S
Sbjct: 135 PADCPRLSVLQRGQITSLYPRGGPEVLTLSRVTTTRDEAARVRQLAQSRGWEQVLLVTSP 194
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
H +R+ FQ +G++ + +D ++ S Y + L E + + A G
Sbjct: 195 SHSRRAARLFQAYGLSVVSVPADETLFDTTLPLPSDRLYAVRVLLYEGLSRVKASLGG 252
>gi|322374753|ref|ZP_08049267.1| putative membrane protein [Streptococcus sp. C300]
gi|321280253|gb|EFX57292.1| putative membrane protein [Streptococcus sp. C300]
Length = 340
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 88/236 (37%), Gaps = 24/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + F+I++ + + + + F + I L Y L
Sbjct: 101 VILFFFVIMAIRVSDTKGLFYTNHLVNIIFFFLIYSYLIFGFAFAGFLL--YSILYLFIP 158
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KK + I++ G G + SRI + + Y + + II SGG
Sbjct: 159 KKKYYDFIIIHGAGLLNGEK-------VTPLLKSRIDKAVEAYHQ--SLNPNVKIIASGG 209
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-LV 179
++E+ N LLE V R+ I LE S T++N FS M + + V
Sbjct: 210 QGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTYENLLFSKEMGEKLVASPRFLFV 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + G+ +A +Y+ ++EYI + +
Sbjct: 270 TNDYHVFRTSTYARCIGMKGDGLGC-----------RTAAYYIPSAFIREYIALCV 314
>gi|306822552|ref|ZP_07455930.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|309801394|ref|ZP_07695521.1| putative lipoprotein [Bifidobacterium dentium JCVIHMP022]
gi|304554097|gb|EFM42006.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|308221909|gb|EFO78194.1| putative lipoprotein [Bifidobacterium dentium JCVIHMP022]
Length = 249
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 84/242 (34%), Gaps = 37/242 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQS---IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
++ + +F + L R I + ++ + + +G + ++
Sbjct: 41 VVFAVLFEALGGGFLFHWWDAMPRLIRGILVALICIAVVAFGTVEGCIVS---------K 91
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+S Q K + +++LG R PS R+ + + + I
Sbjct: 92 MSAQGKPGLDYVIVLGAQVH--------RARPSRVLKFRLDKAIEYLNDNPKTIC----I 139
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG E+ + L +G+ I E++S T +N S +I + ++
Sbjct: 140 VSGGQGSNEPFPEAQGMADYLKTNGIAESRIVEESKSKTTEENIINSKKLIADEN-ASVG 198
Query: 178 LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++++ +H+ R+ + G+ + + + L ++E+ +
Sbjct: 199 IITNDFHVFRALQIARKNGLDDAQGIAAGSPPD-----------MLVNNMVREFFAEIKF 247
Query: 237 YY 238
Sbjct: 248 LL 249
>gi|282857535|ref|ZP_06266763.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282584622|gb|EFB89962.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 259
Score = 71.7 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 33/246 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
FL+V R + + + F+F +L L+ P + +
Sbjct: 27 FFLLVIPAGKWPPKRRLLLGLLTLL--FAFSCTDFCGKKMLAFLEA--LTPEARGERRGR 82
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++++LG G +PS S R+ + + C + + I S
Sbjct: 83 PAVVLVLGGG----AVAEGQTYQPSVSSQRRLRKAREILSCCGDGKLLLSGIESP----- 133
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-----IKNMQGKNIILVS 180
+ L + R+ + LET+SL+T N + S+ + + LV+
Sbjct: 134 -------LMARWLRA-SLPREKVLLETRSLNTEGNLRESAVLLRRLYSDERSRPQVFLVT 185
Query: 181 SAYHLKRSQLYFQHF--GINTKASCS-----DYLNAYYSIIPLSANFYLTELALKEYIGI 233
+H+ R+ + + F S + D + +P LT +A +E + +
Sbjct: 186 DRFHMARAWRWAKKFMPDFEVVPSPAPSLVRDAPWHPVNFVPTCRGLELTSMAWRETLAL 245
Query: 234 LIAYYR 239
L + R
Sbjct: 246 LRDWCR 251
>gi|229525796|ref|ZP_04415201.1| SanA protein [Vibrio cholerae bv. albensis VL426]
gi|229339377|gb|EEO04394.1| SanA protein [Vibrio cholerae bv. albensis VL426]
Length = 254
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 28/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + HL R++ ++ + G I + Q + Q
Sbjct: 14 VVFSALAHLRRLPWRRLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPF 70
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 QVAVVLGTSKYIGKTLNEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHR 118
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL +G+ ++I L+ T + + + +++ +H +
Sbjct: 119 SYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCE 175
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
R+ ++ I +++ ++ L+E A
Sbjct: 176 RALFIARYQDIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 215
>gi|73539728|ref|YP_294248.1| hypothetical protein Reut_A0022 [Ralstonia eutropha JMP134]
gi|72117141|gb|AAZ59404.1| Protein of unknown function DUF218 [Ralstonia eutropha JMP134]
Length = 337
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 86/241 (35%), Gaps = 32/241 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL+ + V+ W L + ++ + G+ + L +S
Sbjct: 122 LLLALCWHRVACWRLANPRRQLLWRALWTAFAVWLVTVGVFFHGIRSGL-------SVSV 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I++LG+GT PA+ +R+ + + + +++SG
Sbjct: 175 PTGVPIQAIIVLGSGTPDCHASPALT--------ARLEQGLIQARRLPA----AKVVVSG 222
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GKNII 177
G E+ + + L+ GV D + E +S T +N FS +++ I+
Sbjct: 223 GPDFGRHCTEADIMADYLVARGVAADRLIREGRSTSTEENLVFSRQLLEAQNVDADGPIV 282
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+V+S +H++R+ + G + + L+EY + ++
Sbjct: 283 VVTSDFHVRRAVGIARKAGFSQI-FGVGAATPL---------YLRFNAWLREYFASISSW 332
Query: 238 Y 238
Sbjct: 333 I 333
>gi|320140100|gb|EFW31959.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143369|gb|EFW35150.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
Length = 208
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + K+ +II++LG G P + +R+ + +Y+
Sbjct: 20 WTVSYRHRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS--- 68
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II+SGG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N+
Sbjct: 69 ATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLY 128
Query: 173 GKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ + +V +S +H+ R+ Q G++ S Y+ + + +K+Y
Sbjct: 129 HEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDY 177
Query: 231 IGILIAY 237
+G++ Y
Sbjct: 178 LGVMYQY 184
>gi|296138443|ref|YP_003645686.1| hypothetical protein Tpau_0710 [Tsukamurella paurometabola DSM
20162]
gi|296026577|gb|ADG77347.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 393
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 95/243 (39%), Gaps = 23/243 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M L+ + + HLL I ++ +L+ I ++ L + Y
Sbjct: 124 MGLALLAEVFLGAHLLHALTEGISAVTAVLLVALLIPGALVVLQLAAY--TVYAVVHRRL 181
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D ++V+LG+G P +R SR+ + ++ ++ SG
Sbjct: 182 PGGRDAGVVVVLGSGLNGERLTPLLR--------SRMDLGISEFRRLVDDGGDPFLVCSG 233
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM--IKNMQGKNIIL 178
G +AE L G+ + + E +S T +N ++S+ + + + +++
Sbjct: 234 GRGHDEVIAEGEAMARYALAQGIPSNRLLREVRSTTTEENLRYSAELLASEGIAWTRMLV 293
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S++H R+ + G+ A + +A ++ L+E++ +++ Y
Sbjct: 294 TTSSFHALRAGSLTRRLGLPATALGA-----------PTALYFRPAAFLREFVAVVVHYR 342
Query: 239 RGN 241
R N
Sbjct: 343 RAN 345
>gi|120436534|ref|YP_862220.1| secreted protein containing DUF218 [Gramella forsetii KT0803]
gi|117578684|emb|CAL67153.1| secreted protein containing DUF218 [Gramella forsetii KT0803]
Length = 209
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 18/214 (8%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++KI S L+ I I + + + +++LG
Sbjct: 2 RRLKKIILASVIGLVLVIFVILGIEAIFQR---QTTGLIYTNMSNVPPAKTVIILGASVH 58
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ S R+ +RLYK+ K + + GD + E
Sbjct: 59 AD-------GKLSPILQDRVDTAIRLYKNDKVSN-----FLVTGDHRSDDYNEVAAMVGY 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L E G+++ I + LDT+ + + + + +N I+V+ +HL R+ ++ G+
Sbjct: 107 LEEKGIDKKLIISDHAGLDTYDSMYRAGKLFE---VENAIVVTQKFHLPRTLFIAKNLGL 163
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ + +D AL E +
Sbjct: 164 DYRGFAADQRAYQTEYRLKQREKLANLKALWEVL 197
>gi|261367379|ref|ZP_05980262.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
gi|282570140|gb|EFB75675.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
Length = 272
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 32/241 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ + + + WH + + + ++ IL L +
Sbjct: 35 LLAAVVTVYAIWHKPLHAWLHAPGLGRVVWWGL-----VVGGILYALLIGFVAVSGYTNP 89
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++++LG G +R R+ + + +I SGG
Sbjct: 90 PTGQEKVVIVLGAGLRRDKPSTLLRY--------RLDKA----YAYAAAHPDVLVITSGG 137
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIIL 178
+ + E L+ G++ + I E S T +N FS +++ I+
Sbjct: 138 QGRDEWIPEGQAMREYLIAKGLDPEQIVAENASTSTEENFAFSLEILRQRGYDESTPIVY 197
Query: 179 VSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
VS+A+H R+ Y + G A + + S+IP L+E + + +
Sbjct: 198 VSNAFHCYRAGHYAERAGFTTVTALPA--ATPWRSVIPC---------YLREALALAYYW 246
Query: 238 Y 238
Sbjct: 247 V 247
>gi|229018413|ref|ZP_04175281.1| hypothetical protein bcere0030_29410 [Bacillus cereus AH1273]
gi|229024642|ref|ZP_04181087.1| hypothetical protein bcere0029_29550 [Bacillus cereus AH1272]
gi|228736707|gb|EEL87257.1| hypothetical protein bcere0029_29550 [Bacillus cereus AH1272]
gi|228742893|gb|EEL93025.1| hypothetical protein bcere0030_29410 [Bacillus cereus AH1273]
Length = 210
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 67/188 (35%), Gaps = 20/188 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I + M+ + + + + ++LG +
Sbjct: 6 KSKKRRILQVFLLMICSIILYVSYAAYDIWSY--------RFKTDDGMKTDAGIVLGAAS 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LYK+ II +GG + L E+
Sbjct: 58 WNGK--------PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKHGVKEEDILIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMRIAKHIK 165
Query: 197 INTKASCS 204
I AS +
Sbjct: 166 IEAYASPT 173
>gi|297566663|ref|YP_003685635.1| hypothetical protein Mesil_2261 [Meiothermus silvanus DSM 9946]
gi|296851112|gb|ADH64127.1| protein of unknown function DUF218 [Meiothermus silvanus DSM 9946]
Length = 181
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 60/187 (32%), Gaps = 29/187 (15%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
P + IV+LG PS R+ +RLY+ +
Sbjct: 17 WAQAPEYGHDPVSGTAPSWIVVLGAA--------QYNGHPSPILKGRLETALRLYRQHRA 68
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
II++GG +E V L GV ++ ET+S T+QN +
Sbjct: 69 PG----IIVTGGKQPGDRYSEGEVGCRYLKAQGVPPTALRCETESHSTWQNLNNIKDTVG 124
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
I+V+ HL R+ + GI + + + +E
Sbjct: 125 KQNV---IVVTDEPHLPRALYLAESLGIKAQGYPV-------------RGTFSSSYYWRE 168
Query: 230 -YIGILI 235
+GIL
Sbjct: 169 SVLGILA 175
>gi|254292005|ref|ZP_04962784.1| sanA protein [Vibrio cholerae AM-19226]
gi|150422082|gb|EDN14050.1| sanA protein [Vibrio cholerae AM-19226]
Length = 254
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/230 (14%), Positives = 71/230 (30%), Gaps = 28/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + HL RK+ ++++ G I + Q + Q
Sbjct: 14 VVFSALAHLRRLPWRKLSQTLLWLVIGVLAGLLAIDRWVSWQTQN---NIINDAQNTPPF 70
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 QVAVVLGTSKYIGKTLNEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHR 118
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL +G+ ++I L+ T + + + +++ +H +
Sbjct: 119 SYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCE 175
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
R+ ++ I +++ ++ L+E A
Sbjct: 176 RALFIARYQDIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 215
>gi|121728223|ref|ZP_01681256.1| sanA protein [Vibrio cholerae V52]
gi|262169490|ref|ZP_06037182.1| SanA protein [Vibrio cholerae RC27]
gi|121629474|gb|EAX61900.1| sanA protein [Vibrio cholerae V52]
gi|227013103|gb|ACP09313.1| sanA protein [Vibrio cholerae O395]
gi|262022303|gb|EEY41012.1| SanA protein [Vibrio cholerae RC27]
Length = 254
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/230 (14%), Positives = 70/230 (30%), Gaps = 28/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + HL RK+ ++ + G I + Q + Q
Sbjct: 14 VVFSALAHLRRLPWRKLSQTLLWLTIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPF 70
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 QVAVVLGTSKYIGKTLNEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHR 118
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL +G+ ++I L+ T + + + +++ +H +
Sbjct: 119 SYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCE 175
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
R+ ++ I +++ ++ L+E A
Sbjct: 176 RALFIARYQDIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 215
>gi|302519757|ref|ZP_07272099.1| integral membrane protein [Streptomyces sp. SPB78]
gi|302428652|gb|EFL00468.1| integral membrane protein [Streptomyces sp. SPB78]
Length = 254
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 34/220 (15%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + R+ + + + + + I + + + + + V+
Sbjct: 15 WPRTRRGQRRALWAVVGLCVLALLPSAWI--------RVASDGGVRAEADVGRAPVAVVF 66
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G PS R+ RLY + + T ++ GD + E
Sbjct: 67 GAGLWDGK--------PSPYLAHRLDAAARLYAAGR-----VTAVLVTGDNSRTSYDEPT 113
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L +GV R + + DT+ + + + +LVS +H++R+
Sbjct: 114 AMRDYLARAGVPRRQVVRDYAGFDTWDSCVRAHRVFG---VDRAVLVSQGFHIRRAVALC 170
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ GI+ + + + A++E +
Sbjct: 171 RAAGIDAQGVAARDPHDVTWY----------YGAIRELLA 200
>gi|153814458|ref|ZP_01967126.1| hypothetical protein RUMTOR_00671 [Ruminococcus torques ATCC 27756]
gi|317500172|ref|ZP_07958405.1| hypothetical protein HMPREF1026_00347 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087601|ref|ZP_08336529.1| hypothetical protein HMPREF1025_00112 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145848854|gb|EDK25772.1| hypothetical protein RUMTOR_00671 [Ruminococcus torques ATCC 27756]
gi|316898461|gb|EFV20499.1| hypothetical protein HMPREF1026_00347 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330399780|gb|EGG79440.1| hypothetical protein HMPREF1025_00112 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 242
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 91/253 (35%), Gaps = 35/253 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSF------------IGWGIIPTILLKHL 49
L +LI+ + +S +F++ F GW + +L
Sbjct: 11 LCVLYYLILVIYSRRLRSTFAVFWLLTGGAHLFFGCVPLPAYVESVFGWICLGLWILFLT 70
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ + ++ I++LG +++ R+ + +
Sbjct: 71 VEIKICLGMFSKPERGAQWIIILGAQVRGRKITDSLK--------RRLDAAIH----YLE 118
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ +++SGG ++E+ L+E GV + I+ E QS+ T +N FS I
Sbjct: 119 ENERTMVVVSGGRGPGEDISEADAMEQYLIEQGVAENRIRKEDQSVSTRENLSFSRRFID 178
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+ + +V++ +H R++L + G +S+ S + ++E
Sbjct: 179 PKH-ETVGIVTNNFHSYRAKLLAEQEGYAHV----------FSVSASSNYVFQINYLVRE 227
Query: 230 YIGILIAYYRGNR 242
+ +L + + R
Sbjct: 228 FFAVLAIFLKNKR 240
>gi|229155866|ref|ZP_04283967.1| hypothetical protein bcere0010_20560 [Bacillus cereus ATCC 4342]
gi|228627473|gb|EEK84199.1| hypothetical protein bcere0010_20560 [Bacillus cereus ATCC 4342]
Length = 166
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 71/168 (42%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 19 YVLILGAKLFGDK--------PSLSLQNRLDVALEYLYSHPE----AKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENVKFSIDLYDVKH---AVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY+ I+
Sbjct: 124 TKIIAKRLGMKMEALAAETPIRSKR-----------KMYVREYVAIMK 160
>gi|307324821|ref|ZP_07604027.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
gi|306889703|gb|EFN20683.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
Length = 231
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 24/195 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R++ + + + + T L + P V+ G G
Sbjct: 16 WRRLVQGGVLVCVLALLP----ATWLRLSTDDRIRTVADVPSAPVG----VVFGAGLWNG 67
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
EPS R+ +RLYK + H+ ++ GD +H E L+
Sbjct: 68 --------EPSPYLAHRLDAAVRLYKDGRVHA-----LLVTGDNSRHDYDEPDAMRAYLV 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV I + DT+ + + + + +LVS +H++R+ GI+
Sbjct: 115 KRGVPDRRIVSDFAGFDTWDSCSRARRVFGVHK---AVLVSQGFHVRRALALCGAAGIDA 171
Query: 200 KASCSDYLNAYYSII 214
+
Sbjct: 172 YGVAVAEPHDVTWYF 186
>gi|168209634|ref|ZP_02635259.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170712243|gb|EDT24425.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
Length = 257
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/247 (17%), Positives = 100/247 (40%), Gaps = 33/247 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + ++ + + ++ + + + + I I I+++ Y + L P
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKMVYKPIKILALICISIF--IIVEGAIIFYPKKSLKP 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G + R+ +T+ + + I++SG
Sbjct: 96 -----CDYIVVLGAGIRGE--------NLTATLRDRLDKTIEYLEK---TGFNGEIVVSG 139
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKN 175
G + E+ L+E+GV +D I LE ++ T++N +S +I+N+ + +
Sbjct: 140 GQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSRKPIKDLD 199
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I++V++ +H RS L + G N Y + + + + +E+
Sbjct: 200 ILIVTTDFHAMRSNLLAKRNGYN----------KAYLYTSKTQWYLVPSMYAREFFAFCK 249
Query: 236 AYYRGNR 242
+Y+ R
Sbjct: 250 SYFLDKR 256
>gi|225352283|ref|ZP_03743306.1| hypothetical protein BIFPSEUDO_03899 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157530|gb|EEG70869.1| hypothetical protein BIFPSEUDO_03899 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 249
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 81/242 (33%), Gaps = 37/242 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSI---RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
+ + +F ++ + L R + ++ + + +G + ++
Sbjct: 41 LAFAALFAVLGFGVLFQWWAMLPRLVRGVAIAVACVGLVAFGTVEGCIVSQ--------- 91
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ Q K D + +V+LG +R R+ + + I
Sbjct: 92 MHAQGKSDLDYVVVLGAQVRKSGPSLVLRY--------RLDKAIEYLDENPNTIC----I 139
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG E+ + L E G+ I E +S T +N S +I + ++
Sbjct: 140 VSGGKGPNEPFPEAQGMADYLKEHGIAEQRILEEPESKTTEENIVNSKKLISDDN-ASVG 198
Query: 178 LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++++ +H+ R+ +G+ N + + L ++E+ +
Sbjct: 199 VITNNFHMFRALQIADKYGLDNAQGIAAGSPPN-----------MLVNNMVREFFAEIKF 247
Query: 237 YY 238
Sbjct: 248 LL 249
>gi|221633222|ref|YP_002522447.1| ACR protein [Thermomicrobium roseum DSM 5159]
gi|221156511|gb|ACM05638.1| Uncharacterized ACR [Thermomicrobium roseum DSM 5159]
Length = 210
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 22/224 (9%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
I TIL+ L + + I++LG
Sbjct: 9 RRSMIGARWFVAGFLGLTALTAGTTILVLGL---AIAEHARSDERAPADAILVLGAAQYN 65
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P+ +R+ L++ TI++ GG + +E+ L
Sbjct: 66 GW--------PTRAFRARLDHAAALFRQG----YAPTIVLVGGKTDRDLESEAEAGARYL 113
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
E G+ + + + +T+Q+ + ++ + + +++VS +HL RS+L + FG
Sbjct: 114 REQGIPDNALIVVPVGRNTWQSIEAAAQPLHERGVQRLLVVSDGFHLFRSKLMARSFGFQ 173
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
S + S I + +A +E + L A+ G R
Sbjct: 174 VVGSPA-----PGSPIRPGSPLERWYIA-REAVATL-AFLLGRR 210
>gi|315221464|ref|ZP_07863385.1| integral membrane protein with DUF218 domain protein [Streptococcus
anginosus F0211]
gi|315189583|gb|EFU23277.1| integral membrane protein with DUF218 domain protein [Streptococcus
anginosus F0211]
Length = 333
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 97/236 (41%), Gaps = 31/236 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I L ++ I +S L + + + IL Y K
Sbjct: 108 IALSLALTFFFPHFIFLHKILSLTNGLLIYGSYLYVTYIL-------YGFVYNVLPVIKH 160
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + R+ + +Y+ H I++SGG
Sbjct: 161 PDYIIILGSGLIGDKVPPLL--------AQRLEKGKTMYEK---FHNHPKIVVSGGQGVD 209
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAY 183
+ E+ L + G+ ++DI +E QS +T +N +FS +++ + ++V++++
Sbjct: 210 EPITEAEAMAQYLRQVGIPQEDIIIERQSTNTLENLRFSKAILDETREKNYRCLVVTNSF 269
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H R+ +Y + G+ SI +A ++L ++E +G+++ Y++
Sbjct: 270 HSLRAGIYMRKIGLK-----------GRSIGSRTAPYFLPSSWIRETLGLIVLYWK 314
>gi|260557220|ref|ZP_05829436.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Acinetobacter
baumannii ATCC 19606]
gi|260409326|gb|EEX02628.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Acinetobacter
baumannii ATCC 19606]
Length = 178
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 28/185 (15%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ Q I++LG+G EPS R+ + S Q +I+
Sbjct: 13 ASQNLPAVKAIIVLGSGVENG--------EPSAILAKRLDTAAPVALSQPQ----AKVIL 60
Query: 119 SGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+GG E++V + L + + +D + LE +S T N + S +++
Sbjct: 61 TGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTELNLKNSKPLLEQAHISVNQ 120
Query: 178 ---LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+V+S +H R+ + G ++ PL + L+EY
Sbjct: 121 PIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAE--------TPLITRYNAW---LREYFAY 169
Query: 234 LIAYY 238
+
Sbjct: 170 ASGWL 174
>gi|225403125|ref|ZP_03760422.1| hypothetical protein CLOSTASPAR_04453 [Clostridium asparagiforme
DSM 15981]
gi|225043243|gb|EEG53489.1| hypothetical protein CLOSTASPAR_04453 [Clostridium asparagiforme
DSM 15981]
Length = 247
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 74/185 (40%), Gaps = 25/185 (13%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
LS + + D + +V+LG A+R+ RI R ++ + I
Sbjct: 86 LSAKGEPDLDYLVVLGAAVKGTEPGEALRL--------RIQAAARYLEANPRTVA----I 133
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG + E+ +LL G+ + I E +S T +N +FS ++ Q +
Sbjct: 134 VSGGRGTGEEITEAECMERELLRLGIPPERIVQENRSQSTAENIRFSYELM-PGQTARVG 192
Query: 178 LVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++S+ +H+ R+ + + Y + L ++E++ +++
Sbjct: 193 VLSNNFHIFRAVAIARKQANYPVCGIAAPY-----------SGILLPHYMVREFMTLVVD 241
Query: 237 YYRGN 241
RGN
Sbjct: 242 KLRGN 246
>gi|317490841|ref|ZP_07949277.1| hypothetical protein HMPREF0864_00039 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920388|gb|EFV41711.1| hypothetical protein HMPREF0864_00039 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 182
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
Q ++ + ++LG G EPS R+ ++ LY+ + T
Sbjct: 15 FSQEQDVRNADCAIVLGAGVKNG--------EPSPVFQERLNHSVYLYQKGYVGIIILTG 66
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
S G ++++ + LL G+ +I LE QS T +N ++ ++ Q N
Sbjct: 67 GYSIGSH----VSDAKIAKRYLLAKGIPEMNIFLEEQSTVTRENLSYAKDVMNLHQLHNA 122
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE---YIGI 233
+++S H+KR+ L + GI +S + + Y + + ++E Y G
Sbjct: 123 LIISDPLHMKRAILIAKDNGIKAWSSPT--PTSLYK-----SQYARFSFLVRESIYYSGY 175
Query: 234 LIAYY 238
L
Sbjct: 176 LTLRL 180
>gi|86147499|ref|ZP_01065810.1| SanA protein [Vibrio sp. MED222]
gi|85834667|gb|EAQ52814.1| SanA protein [Vibrio sp. MED222]
Length = 278
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 26/229 (11%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ HLL + F+ L+F +I Q R + + +
Sbjct: 7 IFRSHLLKAYKKLQGFLFGAFLVFLIGSAAVIAIDYWVSWQAE-DRIIYDIDEVPELEVA 65
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + T+ RI + L+ K + GD
Sbjct: 66 VVLGTSKYLGRTLNDYYKH-------RIEAAIELFDREKVDQFLLS-----GDNAHRSYN 113
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E LL++GV + I L+ T + + + +++ +H +R+
Sbjct: 114 EPWTMKRDLLKAGVPDERINLDYAGFRTLDSIVRAKKIFDTDNFL---IITQKFHCERAL 170
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ IN + + T + L+E A+
Sbjct: 171 FIANSYDINAQCLAVSGPTHHSG----------TSIRLREVFARTKAFL 209
>gi|332672040|ref|YP_004455048.1| hypothetical protein Celf_3550 [Cellulomonas fimi ATCC 484]
gi|332341078|gb|AEE47661.1| protein of unknown function DUF218 [Cellulomonas fimi ATCC 484]
Length = 212
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 15/146 (10%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S Q ++++ G G PS R+ LY +++
Sbjct: 30 SVQDVPPSGVVIVPGAGLRPD-------GTPSTYLRRRLDAAAELYAQG-----TVEVVL 77
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GD + E + L+E GV D + + LDT + + + ++
Sbjct: 78 VSGDNRTPQHDEPTAMRDWLVERGVPADRVVRDHAGLDTHDTCVRAHDVFG---VEEAVV 134
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCS 204
V+ +YHL+R + GI+
Sbjct: 135 VTQSYHLRRMLFSCRAAGIDVTGVGV 160
>gi|225021791|ref|ZP_03710983.1| hypothetical protein CORMATOL_01819 [Corynebacterium matruchotii
ATCC 33806]
gi|224945487|gb|EEG26696.1| hypothetical protein CORMATOL_01819 [Corynebacterium matruchotii
ATCC 33806]
Length = 244
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 72/201 (35%), Gaps = 21/201 (10%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
I I + L RP + + I++LG PS Q
Sbjct: 7 AIITSPILLAITSILVRGRIRPT---NTRHRFDTILVLG--------TTQYGGVPSRQFA 55
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+R+ L+ + I+ GG E+ V N LL++ V+ D + +
Sbjct: 56 ARLRWAAELWHMHGTQN----IVTVGGKLPGDTTTEAEVGRNYLLQAKVDPDCLIPVPEG 111
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
DT + + + + I++V+ H R++L + G+N + S + Y A
Sbjct: 112 NDTLGSYHAALERLGDDYHGTILIVTDPNHALRAELLAKQIGMNARVSPTPYCPAI---F 168
Query: 215 PLSANFYLTELALKEYIGILI 235
P F+ E G+++
Sbjct: 169 PTKGFFWTLS---HEVGGLIV 186
>gi|156974318|ref|YP_001445225.1| hypothetical protein VIBHAR_02033 [Vibrio harveyi ATCC BAA-1116]
gi|156525912|gb|ABU70998.1| hypothetical protein VIBHAR_02033 [Vibrio harveyi ATCC BAA-1116]
Length = 244
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/234 (14%), Positives = 73/234 (31%), Gaps = 27/234 (11%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+F + L S +++ + LL + I ++ Q + +
Sbjct: 1 MLFSRIKSNWKLKFSWKRLALVLSISLLGLLVTVIAIDRWVVLQAQ---EEIFTDYEQVP 57
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + V+LG I + RI + LYK K + GD
Sbjct: 58 EHEVAVVLGTSKYIGKI-------LNTYYTHRINAAIELYKQGKVKQFLLS-----GDNA 105
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E LL +GV + I L+ T + + + + + ++V+ +H
Sbjct: 106 HRSYNEPWTMKRDLLRAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFH 162
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+R+ + I+ + A + +E + + A+
Sbjct: 163 CERALFIADAYNIDAQCLAVAGPTASK---------QKLNMRTRELMARVKAFL 207
>gi|283458819|ref|YP_003363461.1| hypothetical protein RMDY18_18090 [Rothia mucilaginosa DY-18]
gi|283134876|dbj|BAI65641.1| uncharacterized conserved protein [Rothia mucilaginosa DY-18]
Length = 385
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 82/212 (38%), Gaps = 26/212 (12%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
F ++ + + F+ L +++ + +V+LG+G P +
Sbjct: 157 FGGVWGTIYFYFSLVLTYFTIYAVGFTVAAALNLVNFRQQADYVVVLGSGLIGDQVTPLL 216
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
RI + +Y+ +I+SGG + E + + G+
Sbjct: 217 --------AGRIDRGIEIYRKNP----GSKLIMSGGQGADEEVPEGVAMTRYAVSRGIPE 264
Query: 146 DDIKLETQSLDTFQNAQFSSSMI---KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
DI +E ++++T +N FS +++ + + +V+++YHL R+ L + G+
Sbjct: 265 ADIIVEDRAVNTRENLLFSYALMPEVAEGKTPKVAVVTTSYHLFRALLLARSLGLECWGV 324
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + ++ ++E+IG L
Sbjct: 325 GA-----------RTKVYFAVNAFIREFIGYL 345
>gi|218709194|ref|YP_002416815.1| hypothetical protein VS_1201 [Vibrio splendidus LGP32]
gi|218322213|emb|CAV18327.1| Protein sanA [Vibrio splendidus LGP32]
Length = 296
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 26/229 (11%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ HLL + F+ L+F +I Q R + + +
Sbjct: 25 IFRSHLLKAYKKLQGFLFGAFLVFLVGSAAVIAIDYWVSWQAE-DRIIYDIDEVPELEVA 83
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + T+ RI + L+ K + GD
Sbjct: 84 VVLGTSKYLGRTLNDYYKH-------RIEAAIELFDREKVDQFLLS-----GDNAHRSYN 131
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E LL++GV + I L+ T + + + +++ +H +R+
Sbjct: 132 EPWTMKRDLLKAGVPDERINLDYAGFRTLDSIVRAKKIFDTDNFL---IITQKFHCERAL 188
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ IN + + T + L+E A+
Sbjct: 189 FIANSYDINAQCLAVSGPTHHSG----------TSIRLREVFARTKAFL 227
>gi|312880505|ref|ZP_07740305.1| protein of unknown function DUF218 [Aminomonas paucivorans DSM
12260]
gi|310783796|gb|EFQ24194.1| protein of unknown function DUF218 [Aminomonas paucivorans DSM
12260]
Length = 263
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 72/234 (30%), Gaps = 19/234 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + L + ++ L+ + L +V+LG
Sbjct: 33 WRRPRRPALAATLGALALGVYVLSCPFGERLVTAPLEDRVRPSLPEGDAPA---AVVVLG 89
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G I P + R+ + + G G +E +
Sbjct: 90 GGVRYDERGEPIL--PGAYTLERLVTAAEVA----RDRGWPLFCCGGRVQGGTGGSEGDL 143
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L + ET S T++N ++++ + ++LV+S +H+ RS +
Sbjct: 144 MARVLRSWN-PGVAVTAETGSRTTWENLVRVGTLLQERDIRRVVLVTSTFHMPRSLASAR 202
Query: 194 HF--GINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ + L +PLS + L L+E++G+ G
Sbjct: 203 RLLPGLEVHPWPAGRLTDRSPLGAADYLPLS--LNASVLGLREWVGLGAYEVFG 254
>gi|165870553|ref|ZP_02215207.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167639676|ref|ZP_02397946.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686976|ref|ZP_02878195.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706657|ref|ZP_02897116.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|190565393|ref|ZP_03018313.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196033843|ref|ZP_03101254.1| conserved hypothetical protein [Bacillus cereus W]
gi|227814904|ref|YP_002814913.1| hypothetical protein BAMEG_2315 [Bacillus anthracis str. CDC 684]
gi|228927349|ref|ZP_04090406.1| hypothetical protein bthur0010_20610 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228933586|ref|ZP_04096436.1| hypothetical protein bthur0009_20510 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228945900|ref|ZP_04108243.1| hypothetical protein bthur0007_20530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229091270|ref|ZP_04222488.1| hypothetical protein bcere0021_20850 [Bacillus cereus Rock3-42]
gi|229121834|ref|ZP_04251054.1| hypothetical protein bcere0016_21340 [Bacillus cereus 95/8201]
gi|164713708|gb|EDR19231.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512385|gb|EDR87761.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170128388|gb|EDS97256.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669027|gb|EDT19771.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|190563420|gb|EDV17385.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195993523|gb|EDX57480.1| conserved hypothetical protein [Bacillus cereus W]
gi|227005837|gb|ACP15580.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|228661623|gb|EEL17243.1| hypothetical protein bcere0016_21340 [Bacillus cereus 95/8201]
gi|228692036|gb|EEL45777.1| hypothetical protein bcere0021_20850 [Bacillus cereus Rock3-42]
gi|228813774|gb|EEM60052.1| hypothetical protein bthur0007_20530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228826046|gb|EEM71829.1| hypothetical protein bthur0009_20510 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228832245|gb|EEM77825.1| hypothetical protein bthur0010_20610 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 166
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S +I+SGG +
Sbjct: 19 YVLILGAKLFGDK--------PSLSLQNRLDVALEYLYSHP----DVKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDLYDVKH---AVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 124 TKIIAKRLGMKMEALAAETPMRSKR-----------KMYVREYAAIMK 160
>gi|160885715|ref|ZP_02066718.1| hypothetical protein BACOVA_03719 [Bacteroides ovatus ATCC 8483]
gi|156108528|gb|EDO10273.1| hypothetical protein BACOVA_03719 [Bacteroides ovatus ATCC 8483]
Length = 211
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 27/219 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
RK+ + + + + I ++ +K + + N+ +LLG
Sbjct: 2 KRKLLYTTLIIAILCVISI-VVCNRTIKK--HTVSKLYTEVNTIPSNNVGLLLGT----- 53
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + RI T+ LYK+ K I+ GD +K E L+
Sbjct: 54 -SPKLKSGNNNLYFDYRILATVELYKAGK-----IKYILISGDNRKEDYNEPEEMKKALM 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ G+ I L+ T + + + + ++S +H +R+ + GI+
Sbjct: 108 QKGIPEKSIYLDYAGFRTLDSVVRAKEVFGQNRLT---IISQRFHNERAIYLAEKNGIDA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ P + + ++E + + +
Sbjct: 165 IGYNA----------PNVNAYAGLKTNIRELLARVKMFI 193
>gi|297578787|ref|ZP_06940715.1| sanA protein [Vibrio cholerae RC385]
gi|297536381|gb|EFH75214.1| sanA protein [Vibrio cholerae RC385]
Length = 254
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 28/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + HL R++ ++ + G I + Q + Q
Sbjct: 14 VVFSALAHLRRLPWRRLSQALLWLAVGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPF 70
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 QVAVVLGTSKYIGKTLNEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHR 118
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL +G+ ++I L+ T + + + +++ +H +
Sbjct: 119 SYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCE 175
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
R+ ++ I +++ ++ L+E A
Sbjct: 176 RALFIARYQDIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 215
>gi|110800807|ref|YP_695894.1| hypothetical protein CPF_1451 [Clostridium perfringens ATCC 13124]
gi|110675454|gb|ABG84441.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 257
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 100/247 (40%), Gaps = 33/247 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + ++ + + ++ + M + + I I I+++ Y + L P
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKTVYKPMKILALICISIF--IIVEGAIIFYPKKSLKP 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G + R+ +T+ + + I++SG
Sbjct: 96 -----CDYIVVLGAGIRGE--------NLTATLRDRLDKTIEYLEK---TGFNGEIVVSG 139
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKN 175
G + E+ L+E+GV +D I LE ++ T++N +S +I+N+ + +
Sbjct: 140 GQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKDLD 199
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I++V++ +H RS L + G N Y + + + + +E+
Sbjct: 200 ILIVTTDFHAMRSNLLAKRNGYN----------KAYLYTSKTQWYLVPSMYAREFFAFCK 249
Query: 236 AYYRGNR 242
+Y+ R
Sbjct: 250 SYFLDKR 256
>gi|312196065|ref|YP_004016126.1| hypothetical protein FraEuI1c_2217 [Frankia sp. EuI1c]
gi|311227401|gb|ADP80256.1| protein of unknown function DUF218 [Frankia sp. EuI1c]
Length = 267
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 20/177 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG PS +R+ LY++ +I G
Sbjct: 94 DQRPRSDALVVLGA--------SQYNGRPSEVFQARLDHAAELYRAGVA----PLVITVG 141
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L + GV + + DT ++ + + + ++V+
Sbjct: 142 GKIPGDHYTEAGVGATYLEKQGVPTSAVLAVPEGRDTLESLIGVAGEMNTRGLRRAVIVT 201
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY-LTELALKEYIGILIA 236
+H RS + G+ +S + P + ++E IG
Sbjct: 202 DRWHSLRSVAMARDLGLTAHSSPT-------VTGPANRGLETQVRYIIREAIGYRFY 251
>gi|289450181|ref|YP_003474931.1| hypothetical protein HMPREF0868_0608 [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184728|gb|ADC91153.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 231
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 65/195 (33%), Gaps = 17/195 (8%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ R+ + + + L L R + + I++LG
Sbjct: 22 RSKPRRRPSLNQIIVCSGLVLCLLFLAVPLWMGLAVK-GRQISNADDIPKAECIMVLGAR 80
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS R+ + LY K I+ G E+IV
Sbjct: 81 VYKD--------RPSHMLEGRLEAAISLYFKQKAPQ-----ILVSGGGAGTDFDEAIVMR 127
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L+ GV + I ++ ++T+Q+ ++ K I++ ++ YH++RS
Sbjct: 128 RYLISRGVPAESIIMDHAGINTYQSCYNAT---FKFGYKKILIATTEYHMQRSLFLATKL 184
Query: 196 GINTKASCSDYLNAY 210
G++ S AY
Sbjct: 185 GLDCYGYASPDKLAY 199
>gi|229011547|ref|ZP_04168733.1| hypothetical protein bmyco0001_19960 [Bacillus mycoides DSM 2048]
gi|229059943|ref|ZP_04197317.1| hypothetical protein bcere0026_20500 [Bacillus cereus AH603]
gi|229133107|ref|ZP_04261943.1| hypothetical protein bcere0014_20300 [Bacillus cereus BDRD-ST196]
gi|228650316|gb|EEL06315.1| hypothetical protein bcere0014_20300 [Bacillus cereus BDRD-ST196]
gi|228719356|gb|EEL70960.1| hypothetical protein bcere0026_20500 [Bacillus cereus AH603]
gi|228749702|gb|EEL99541.1| hypothetical protein bmyco0001_19960 [Bacillus mycoides DSM 2048]
Length = 166
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 71/168 (42%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + + + +I+SGG +
Sbjct: 19 YVLILGAKLFGD--------RPSLSLQNRLDIALEYLHAHPE----VKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ + I +E +S +T++N +FS + + ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDENRILIEDRSTNTYENLKFSMDLYDVK---HAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + GI +A ++ + ++EY I+
Sbjct: 124 TKIIAKRLGIKMEALAAETPRRSKK-----------KAYVREYAAIMK 160
>gi|325680889|ref|ZP_08160426.1| putative membrane protein [Ruminococcus albus 8]
gi|324107353|gb|EGC01632.1| putative membrane protein [Ruminococcus albus 8]
Length = 497
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 92/273 (33%), Gaps = 54/273 (19%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR--------KIFFMSCFMLLFSFIGWGIIPTIL------- 45
+ L +F + + R F +S +LL + + +
Sbjct: 219 LPLLLVFSLALPISNISLIRREGLNFVNVLGFILSGLILLSYLVEIFYVGRNISGSETYV 278
Query: 46 -------------LKHLQFSYQ------RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+L+ + + D +++LG +
Sbjct: 279 RITGAIDSTLTTCFAYLEDMLISAMLCGIISVKRKVAFDKTHVMILGCAISDD------- 331
Query: 87 IEPSFQSYSRIFETMRLYKSCK-QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
P R+ + + K + SGG ++E+ L+ G+
Sbjct: 332 GTPLPLLAGRVDRAIEFANAQKAATGKGIKFVPSGGQGSDEVISEAESMRRYLISKGISD 391
Query: 146 DDIKLETQSLDTFQNAQFS-SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DDI E +S +T +N +FS + + + I+ +S YH+ RS + ++ G++ S
Sbjct: 392 DDIIAEDKSANTEENMRFSLEKIRADCEEPKIVFSTSNYHVLRSGIISKNEGLDADGVGS 451
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ ++ A++E++G+L++
Sbjct: 452 -----------KTRWYFWPNAAVREFVGLLVSK 473
>gi|300361824|ref|ZP_07058001.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
gi|300354443|gb|EFJ70314.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
Length = 342
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 93/238 (39%), Gaps = 33/238 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+++++FL L + ++ + + I I++ + S+ L
Sbjct: 118 IIAYLFLFPVVGRLTRNNFGTYLYLFVNLTIIYLI------FIMMMYTLTSWIN--LINF 169
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K N IV+LG G P + +RI + +Y++ II+SGG
Sbjct: 170 KIKKLNYIVVLGAGLIGKKVTPLL--------AARINREIEIYRNNP----GSKIIMSGG 217
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E+ E G+ + DI +E +S T QN FS ++K +V++
Sbjct: 218 QGPGEEIPEAAAMAKYAEEKGISKQDIIVEDKSKTTRQNLAFSHKLMKA--DSRFAIVTN 275
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+YH+ R+ + + G++ + + ++ ++E+I L +R
Sbjct: 276 SYHVYRALVLAKRMGLDCIGYGA-----------KTKWYFTLNAFVREFIAYLTITWR 322
>gi|228474816|ref|ZP_04059547.1| putative membrane protein [Staphylococcus hominis SK119]
gi|228271479|gb|EEK12847.1| putative membrane protein [Staphylococcus hominis SK119]
Length = 318
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 103/263 (39%), Gaps = 48/263 (18%)
Query: 1 MLLSWIFLIVSYWHLLCQSI---------RKIFFMSCFMLLFSFIGWGIIPT----ILLK 47
+++S I L+V + HL R++ F+ +F ++ +P L
Sbjct: 58 IIISTIGLLVKHSHLFKIKKGTCFLNKMFRRLINGVLFIGIFIYLSTIPLPILNGMFLWI 117
Query: 48 HLQFS-----------YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
L + + K ++I++LG G P + SR
Sbjct: 118 ALILFSACYAFIIYLIFSSAFERAKTHKQYDMILILGAGIFNETVTPML--------ASR 169
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + +Y K S +C I++SGG ++E++ N L++ GV I +E+QS
Sbjct: 170 LDRALEIY---KVQSHNCNILVSGGQGPDEPISEALAMKNYLIKCGVSSSSILMESQSSS 226
Query: 157 TFQNAQFSSSMIKNMQGKNIIL--VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T++N +S S I + V+S +H+ R+ + Q I S + Y +
Sbjct: 227 TYENFLYSKSFINTSFENVPSILCVTSQFHILRALRFAQKLNIKVIGLGS---STPYHFL 283
Query: 215 PLSANFYLTELALKEYIGILIAY 237
+ L++++ ++ Y
Sbjct: 284 DKA--------LLRDFLALIYQY 298
>gi|299768888|ref|YP_003730914.1| hypothetical protein AOLE_03200 [Acinetobacter sp. DR1]
gi|298698976|gb|ADI89541.1| hypothetical protein AOLE_03200 [Acinetobacter sp. DR1]
Length = 261
Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 84/246 (34%), Gaps = 32/246 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL-- 58
++ + + L + + FF + F GW L+ L + +
Sbjct: 36 IIPFILGTFFCLYSLFYYHLERFFFYHYRLHTFWRFGWLCFWIWLI-GLGYFFSFIKENK 94
Query: 59 -SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ I++LG+G +PS R+ L +Q ++
Sbjct: 95 DTSDNIPPVRAIIVLGSGVENG--------QPSKILAKRLDTAAPLALKQQQ----AKVV 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++GG +E++V + L + + ++ + LE +S T N + S ++
Sbjct: 143 LTGGLDFSEKESEALVMSRYLQQKYHIAKERMILEDKSTSTELNLKNSQPLLAQQHINLN 202
Query: 177 I---LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+V+S +H+ R+ + G ++ PL+ + L+EY
Sbjct: 203 QPIAIVTSDFHIPRAVAIAKKQGYTQVYGVAAE--------TPLATRYNAW---LREYFA 251
Query: 233 ILIAYY 238
+
Sbjct: 252 YASGWL 257
>gi|295109560|emb|CBL23513.1| Uncharacterized conserved protein [Ruminococcus obeum A2-162]
Length = 160
Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + D + I++LG + R+ + + ++SG
Sbjct: 2 KTRSDLDYIIVLGAHVNGTK--------LTLALLERVRRALLYLEENP----DTKAVLSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++E+ L E G+ + + E QS +T +N FS +I + +I +V+
Sbjct: 50 GRGDGEQISEAEAMYRYLTEHGIAAERLIREEQSTNTKENLDFSLRLIGS-MEHSIGVVT 108
Query: 181 SAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R + G S Y + + L +E + IL
Sbjct: 109 NNFHVFRGVAIGKKCGCRKIYPVPSKYRS-----------WRLLIYVPREILAILKDKIV 157
Query: 240 GN 241
GN
Sbjct: 158 GN 159
>gi|258626405|ref|ZP_05721252.1| Protein sanA [Vibrio mimicus VM603]
gi|262171782|ref|ZP_06039460.1| SanA protein [Vibrio mimicus MB-451]
gi|258581457|gb|EEW06359.1| Protein sanA [Vibrio mimicus VM603]
gi|261892858|gb|EEY38844.1| SanA protein [Vibrio mimicus MB-451]
Length = 233
Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 66/222 (29%), Gaps = 28/222 (12%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ C RK+ + ++ I + Q + Q + V+LG
Sbjct: 1 MSCLPWRKLGQILLLTVIAVVSSLLAIDRWVTWQTQN---NIISDTQNTPPFQVAVVLGT 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
I T+ RI + LY+ K + + GD E
Sbjct: 58 SKYIGKTLNEYYTN-------RIDAAIVLYQQGKVRNFLLS-----GDNAHRSYNEPWTM 105
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL +G+ ++I L+ T + + + +++ +H +R+ +
Sbjct: 106 KRDLLRAGIPAENISLDYAGFRTLDSIVRAKQIFDTDNFL---IITQRFHCERALFIAHY 162
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I +++ ++ L+E A
Sbjct: 163 QDIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 194
>gi|239630407|ref|ZP_04673438.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301067561|ref|YP_003789584.1| hypothetical protein LCAZH_2543 [Lactobacillus casei str. Zhang]
gi|239526690|gb|EEQ65691.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439968|gb|ADK19734.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
Length = 352
Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 92/242 (38%), Gaps = 31/242 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
++ L++ + F ++ F L F + L + ++++
Sbjct: 109 IAIGLLLIEIAASFGRRFIPDPLYFSLAIFFGLGGFYVLLTLYNFLTVLILYNFRP---- 164
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC-KQHSMHCTIII 118
+ +++LG G + S SRI ++ Y+ K+ II
Sbjct: 165 --QPHNRTFLIVLGAGLLNGD-------QVSPLLASRIDAAIKFYRKQIKKGRPAPRIIF 215
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII- 177
SGG ++E++ L G+ D LE QS T +N QFS +I G++
Sbjct: 216 SGGKGSDEAISEAMAMQRYALGKGIPEGDTLLEDQSTTTLENMQFSKRLITQEIGESPYK 275
Query: 178 --LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YHL R+ ++ + GI ++ ++L ++EY+ +++
Sbjct: 276 ASFFTNNYHLFRAGIFARMAGIAANGVG-----------GATSFYFLPNAVIREYLALVV 324
Query: 236 AY 237
Y
Sbjct: 325 LY 326
>gi|313813753|gb|EFS51467.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
Length = 208
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 24/193 (12%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +C + +G ++ L + + ++ ++LG
Sbjct: 1 MVVSTCIAAFVALLGPWVLAGALSYG-------KVHDVADTEPRDVAIVLGAQV------ 47
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
PS R+ LY+S K +I+ GD ++ E V L+ G
Sbjct: 48 -LPSGTPSAYLRGRLDVAADLYRSGKA-----KVILVSGDHRETHYNEPKVMKTYLVSKG 101
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V I + LDT+ + + I+V+ YH R+ + G++
Sbjct: 102 VPAARIVEDVAGLDTYDTCVRARRIFG---VDRAIMVTQDYHEIRTVATCRMTGLDAVGV 158
Query: 203 C--SDYLNAYYSI 213
+ + +
Sbjct: 159 PDRTQPRDNVWWY 171
>gi|229167111|ref|ZP_04294854.1| hypothetical protein bcere0007_20770 [Bacillus cereus AH621]
gi|228616345|gb|EEK73427.1| hypothetical protein bcere0007_20770 [Bacillus cereus AH621]
Length = 166
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + + + +I+SGG +
Sbjct: 19 YVLILGAKLFGD--------RPSLSLQNRLDIALEYLHAHPE----VKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ + I +E S +T++N +FS + + ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDENRILIEDCSTNTYENLKFSMDLYDVK---HAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + GI +A ++ + ++EY I+
Sbjct: 124 TKIIAKRLGIKMEALAAETPRRSKK-----------KAYVREYAAIMK 160
>gi|118443232|ref|YP_877657.1| hypothetical protein NT01CX_1576 [Clostridium novyi NT]
gi|118133688|gb|ABK60732.1| conserved protein [Clostridium novyi NT]
Length = 253
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 90/236 (38%), Gaps = 30/236 (12%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ FL S+ +I ++ L+ I G + I+L+ + +
Sbjct: 36 LMGIGFLFYSFIKKFIINIYRLLNSRLKFLVKLVIIAGFVSFIILESCIIYFGI----SK 91
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ I++LG S R+ +T+ + + II+SGG
Sbjct: 92 KYVKSDYIIVLGAAVHGD--------YMSLILKERVDKTLDYLREYP----NTKIIVSGG 139
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM---IKNMQGKNIIL 178
+ E+ L+ +G+ + I E +S T +N ++SS + ++N + + +
Sbjct: 140 KGPGESITEAEAMRRYLVSNGICDNQIIKEEKSRTTAENFKYSSKIIRSMENGRTPTVSV 199
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
V++ +H+ R+++ + G+ + S + ++EY ++
Sbjct: 200 VTTNFHMLRAKMLAKRSGLVVQEVVSKGHIS-----------SAPNYYVREYFALV 244
>gi|319954081|ref|YP_004165348.1| hypothetical protein Celal_2563 [Cellulophaga algicola DSM 14237]
gi|319422741|gb|ADV49850.1| protein of unknown function DUF218 [Cellulophaga algicola DSM
14237]
Length = 186
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 81/218 (37%), Gaps = 34/218 (15%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
++ ++I+ +LL F G Y + +K +I V+LGN
Sbjct: 2 KNRKQIYKFVISILLIWFFG------------HIMYITIDGLTKNEKTADIAVILGNKVN 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
T+ R+ + ++ Q+ II+SGG K G E
Sbjct: 50 EDGTLS-----------ERLEKRLQCGLRLFQNGQVKKIIVSGGLG-KEGFYEGNKMKAY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L++ V + ++ +T + + ++ ++II+VS +HL R+++ F+ G+
Sbjct: 98 LIKKNVPDSLVIIDNFGNNTLATVHNTIKLKDSLNFESIIVVSQYFHLTRTKMLFRKQGL 157
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+S S P F +E++ +
Sbjct: 158 KNISSAS----------PEYFEFRDFYSLFREFVAYYV 185
>gi|255263139|ref|ZP_05342481.1| periplasmic protein [Thalassiobium sp. R2A62]
gi|255105474|gb|EET48148.1| periplasmic protein [Thalassiobium sp. R2A62]
Length = 153
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 60/170 (35%), Gaps = 24/170 (14%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG P ++ R LY + K II G KH +
Sbjct: 5 LILGAAVWADGPSPTLK--------RRTLHGAALYHAGKIDR-----IICCGGLGKHPPS 51
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ + L G+ DI LE QS T +N + ++ ++ +++ YH R+
Sbjct: 52 EAEAMAHLLQNEGIPTADIILEDQSTTTGENIANALPLLDT---SSVTIITDWYHAPRAC 108
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L + G+ S A T+ L+E+ ++ R
Sbjct: 109 LVARRAGLKATGSAPSLRGARIWP--------QTKATLREFPAYVVYLLR 150
>gi|325123318|gb|ADY82841.1| putative SanA protein [Acinetobacter calcoaceticus PHEA-2]
Length = 261
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 86/246 (34%), Gaps = 32/246 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L + + FF + GW L+ L + + +
Sbjct: 36 VIPLILGAFFCLYSLFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFSFIKENK 94
Query: 61 Q---WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
I++LG+G +PS R+ L +Q I+
Sbjct: 95 DTSNNIPPVKAIIVLGSGVENG--------QPSTILAKRLDTAAPLALKQQQ----AQIV 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---G 173
++GG +E++V + L + + RD + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKESEALVMSRYLEQKYHIARDQMILEDKSTSTELNLKNSKPLLEQHHITLD 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ I +V+S +H+ R+ + G ++ PL+ + L+EY
Sbjct: 203 QPIAIVTSDFHIPRAIAIAKKQGYTQVYGIAAE--------TPLATRYNAW---LREYFA 251
Query: 233 ILIAYY 238
+
Sbjct: 252 YASGWL 257
>gi|320160500|ref|YP_004173724.1| hypothetical protein ANT_10900 [Anaerolinea thermophila UNI-1]
gi|319994353|dbj|BAJ63124.1| hypothetical protein ANT_10900 [Anaerolinea thermophila UNI-1]
Length = 222
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 71/223 (31%), Gaps = 31/223 (13%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP-QWKKDGNIIVLLGNGTT 77
+S F++L ++ L Y + + P + + ++ G G +
Sbjct: 3 RRTFSRIVSMFIVLILVATTLLLAARGFTAL---YAKSRIIPVADAPEMPVAIVFGAGLS 59
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS R+ LY K ++ GD + E
Sbjct: 60 RD-------GTPSPVLRDRVETAAALYFQGKVKK-----LLMSGDNRFVDYNEPGAMRQY 107
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV ++I L+ T+ + ++ ILV+ +HL R+ G+
Sbjct: 108 ALDLGVPAENIVLDYAGRRTYDTCYRARAIFG---VTEAILVTQPFHLPRALYLCNQLGV 164
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELA--LKEYIGILIAYY 238
+D ++L ++E + L+A +
Sbjct: 165 KAWGVPADNR----------YYLKRSQLIWNIRETMATLVALW 197
>gi|260362436|ref|ZP_05775388.1| SanA protein [Vibrio parahaemolyticus K5030]
gi|260878380|ref|ZP_05890735.1| SanA protein [Vibrio parahaemolyticus AN-5034]
gi|260899033|ref|ZP_05907474.1| SanA protein [Vibrio parahaemolyticus Peru-466]
gi|260903412|ref|ZP_05911807.1| SanA protein [Vibrio parahaemolyticus AQ4037]
gi|308088640|gb|EFO38335.1| SanA protein [Vibrio parahaemolyticus Peru-466]
gi|308091255|gb|EFO40950.1| SanA protein [Vibrio parahaemolyticus AN-5034]
gi|308107629|gb|EFO45169.1| SanA protein [Vibrio parahaemolyticus AQ4037]
gi|308115571|gb|EFO53111.1| SanA protein [Vibrio parahaemolyticus K5030]
gi|328473012|gb|EGF43860.1| SanA protein [Vibrio parahaemolyticus 10329]
Length = 224
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 66/214 (30%), Gaps = 27/214 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ L + I + + + + V+LG I T
Sbjct: 1 MILSISLFGLLLSVVAIDRWVALQAKD---NIFIDYDQIPQHEVAVVLGTSKYIGKT--- 54
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ RI + LYK K + GD E LL++GV
Sbjct: 55 ----LNTYYTHRINAAIELYKQGKVKQFLLS-----GDNAHRSYNEPWTMKRDLLKAGVP 105
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I L+ T + + + + + ++V+ +H +R+ + I+ +
Sbjct: 106 EEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFHCERALFIADAYNIDAQCLAV 162
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
AN T + ++E + + A+
Sbjct: 163 AGPT---------ANKQKTSMRIRELLARVKAFL 187
>gi|153215353|ref|ZP_01949966.1| sanA protein [Vibrio cholerae 1587]
gi|124114796|gb|EAY33616.1| sanA protein [Vibrio cholerae 1587]
Length = 254
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 28/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + HL R++ ++ + G I + Q + Q
Sbjct: 14 VVFSALAHLRRLPWRRLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPF 70
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 QVAVVLGTSKYIGKTLNEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHR 118
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL +G+ ++I L+ T + + + +++ +H +
Sbjct: 119 SYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCE 175
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
R+ ++ I +++ ++ L+E A
Sbjct: 176 RALFIARYQDIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 215
>gi|93006297|ref|YP_580734.1| hypothetical protein Pcryo_1471 [Psychrobacter cryohalolentis K5]
gi|92393975|gb|ABE75250.1| protein of unknown function DUF218 [Psychrobacter cryohalolentis
K5]
Length = 257
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 83/226 (36%), Gaps = 24/226 (10%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIG--WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L + I F + ++ I + ++ L + V+LG
Sbjct: 25 LFRIINVTFLLGATTVILVLISLFTPLFSQAVVYILAHLPLPKMPPVAMSSPPTAYVVLG 84
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G T +I + S +R Y I++SG AE+
Sbjct: 85 GGLTND---NNNQIILNRYSLNRARAAATAYHDLP-----LPIVLSG--------AEAPW 128
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+E G++ + E S++T +NA+F++ + ++ L++ +YH+ R++ F
Sbjct: 129 LGQWLIEHGIDG--LISENASMNTCENARFTAK---RIPLHHVYLITDSYHMARARRQFA 183
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
GIN+ A + L + + N + A+ E L R
Sbjct: 184 LNGINSTAINAP-LPVIRDWMEPAQNLSHSRRAVYEVAAYLRDVIR 228
>gi|71066602|ref|YP_265329.1| hypothetical protein Psyc_2048 [Psychrobacter arcticus 273-4]
gi|71039587|gb|AAZ19895.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 264
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 84/250 (33%), Gaps = 40/250 (16%)
Query: 2 LLSWIFLIVSYWHLLCQSIR-------KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
LL +F+ + + + ++ M L F+ +G+ L + ++
Sbjct: 42 LLGMVFVAHGIFWRNIRRFICQNRWLSRFWYALWTMFLIWFVSFGVFIYALQQQIEQ--- 98
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
S + I++LG+GT P + R+ L S K
Sbjct: 99 ----STRPIPKVAAIIVLGSGTVAGKPTPTL--------AKRLDTAAPLIHSQKS----A 142
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I SGG +E+ + L + + I E QS T +N +S ++
Sbjct: 143 LVITSGGIGFGQTRSEANIMATYLYDTYDISLKRILQEGQSTSTAENLIYSQEILAAKGL 202
Query: 174 K---NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
I +V+S +H+ R+ +H G YL P + +EY
Sbjct: 203 SIKAPIAIVTSDFHIIRAANIARHQG---------YLQPIMLASPTPLSIRY-NAWFREY 252
Query: 231 IGILIAYYRG 240
+ + G
Sbjct: 253 FAFVSGWLFG 262
>gi|183179591|ref|ZP_02957802.1| sanA protein [Vibrio cholerae MZO-3]
gi|183013002|gb|EDT88302.1| sanA protein [Vibrio cholerae MZO-3]
Length = 254
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 28/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + HL R++ ++ + G I + Q + Q
Sbjct: 14 VVFSALAHLRRLPWRRLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPF 70
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 QVAVVLGTSKYIGRTLNEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHR 118
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL +G+ ++I L+ T + + + +++ +H +
Sbjct: 119 SYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCE 175
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
R+ ++ I +++ ++ L+E A
Sbjct: 176 RALFIARYQDIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 215
>gi|164688115|ref|ZP_02212143.1| hypothetical protein CLOBAR_01760 [Clostridium bartlettii DSM
16795]
gi|164602528|gb|EDQ95993.1| hypothetical protein CLOBAR_01760 [Clostridium bartlettii DSM
16795]
Length = 249
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 89/239 (37%), Gaps = 35/239 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + I + ++ + ++ I + ++ +I++ +
Sbjct: 34 LILGLLCFIYHFIKKYLNKKCTLYKIVKGVICCVLIIFILVESIMVLY---------PKH 84
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG +++ R+ + + II+SG
Sbjct: 85 DLDTKCDYIIVLGALVNKNKISQSLK--------ERLDSCVEYLY---LTHDNPKIIVSG 133
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-----IKNMQGKN 175
G + ++E+ + LL G++ +I +E +S T +N FS + K ++ N
Sbjct: 134 GQGRGENISEASAMKSYLLSKGIDEKNIIMEDKSRTTKENFCFSKKIIEGDSHKKIENLN 193
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I ++++ +H RS++ + G + N I+ + +E+ ++
Sbjct: 194 IKVITTDFHTLRSKIISKRVGYANTTFYTSSSNGALFILNYT----------REFFALI 242
>gi|260773007|ref|ZP_05881923.1| SanA protein [Vibrio metschnikovii CIP 69.14]
gi|260612146|gb|EEX37349.1| SanA protein [Vibrio metschnikovii CIP 69.14]
Length = 252
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 61/203 (30%), Gaps = 15/203 (7%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
L +R ++L I +I +I + + ++ V
Sbjct: 9 LMISRLKTLLRWFLRGVALLMLLFLIAVAVIFSIDRWVSWQTQPHIISDINKLPKFDVAV 68
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + T+ + RI + LY+ K + GD E
Sbjct: 69 VLGTSKYLGRTLNDYYLH-------RIEAAVELYQLNKTDYFLLS-----GDNAHRSYNE 116
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
LL++GV + I L+ T + + + +V+ +H +R+
Sbjct: 117 PWTMKRDLLKAGVPDEQIYLDYAGFRTLDSIVRAKRIFDTDNFL---IVTQRFHCERALF 173
Query: 191 YFQHFGINTKASCSDYLNAYYSI 213
QH IN +
Sbjct: 174 IAQHHEINATCLAVPGPKNHLGY 196
>gi|51893168|ref|YP_075859.1| hypothetical protein STH2030 [Symbiobacterium thermophilum IAM
14863]
gi|51856857|dbj|BAD41015.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 225
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 71/198 (35%), Gaps = 26/198 (13%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ L + + ++ + +L L+ + +++ + + +
Sbjct: 6 GFARGLARWLVRLLAVGTAAVLAI--------NALVYF---PGRSRIITADAARPAQVAL 54
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G P+ R+ + LY++ K + + GD + E
Sbjct: 55 VLGAGVYAD-------GRPTPMLRDRLETALALYEAGKARKLLLS-----GDHSRPDYDE 102
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L E GV +D+ L+ DT+ + ++++ + I+V+ +HL R+
Sbjct: 103 VNAMRRYLQERGVPPEDLFLDHAGFDTYDSMYRAAAIFQVDDV---IVVTQGFHLPRALW 159
Query: 191 YFQHFGINTKASCSDYLN 208
G++ + +D
Sbjct: 160 IAARLGLDAQGVAADQRR 177
>gi|239638178|ref|ZP_04679130.1| putative membrane protein [Staphylococcus warneri L37603]
gi|239596199|gb|EEQ78744.1| putative membrane protein [Staphylococcus warneri L37603]
Length = 320
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 95/239 (39%), Gaps = 27/239 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M LS + L + S+ + ++ L IG+ + L + + S
Sbjct: 85 MGLSVMRLTLFISACFYISLSPLLIINGIALWLCLIGFTTLFAFLCYLI---WSSVFGSR 141
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + ++I++LG G P ++ R+ + +Y +++SG
Sbjct: 142 HFNQSVDLIIVLGAGIFTEEVTPMLK--------ERLNRALEIYH---HSEHKPQLLVSG 190
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IIL 178
G + ESI L++ GV D+I LE QS +T N +S +I ++
Sbjct: 191 GQGPDEPIPESIAMQRYLIKQGVPNDNILLEQQSTNTHTNFVYSKEIILQYFNNMPKMVC 250
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q+ I T S + Y ++ +++++G++ Y
Sbjct: 251 VTSQFHILRALKLAQNLDIPTYGVGS---HTPYHFFHIA--------LIRDFLGVMYQY 298
>gi|188586776|ref|YP_001918321.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351463|gb|ACB85733.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 194
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 87/224 (38%), Gaps = 38/224 (16%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + + +++F+ I D + ++LG
Sbjct: 1 MSSKKFLIPLAVIIMLIIFAAIRIWTFGA----------------QNELVDADAAIVLGA 44
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+PS R+ + +Y ++ +I++GG + AES V
Sbjct: 45 AVW--------DGQPSPVFEERLNHAIWIY----ENEYVDKLILTGGKAEDTDRAESQVA 92
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ +++ V++DDI +ET+S T +N +++ + + ++ I+VS H++R+ +
Sbjct: 93 KDYAIKNQVQKDDILIETKSSITEENFKYAQEIAAEHELESFIVVSDPLHMRRAITIAET 152
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKE---YIGILI 235
G++ S + + Y + ++E YIG +I
Sbjct: 153 KGMDVYPSPT--PGSAYETLRS-----QVPFLIREVIFYIGYII 189
>gi|305680812|ref|ZP_07403619.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305659017|gb|EFM48517.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length = 244
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 18/175 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG PS Q +R+ L+ + I+ G
Sbjct: 30 NTRHRFDTILVLG--------TTQYGGVPSRQFAARLRWAAELWHMHGTQN----IVTVG 77
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V N LL++ V+ D + + DT + + + + I++V+
Sbjct: 78 GKLPGDTTTEAEVGRNYLLQAKVDPDCLIPVPEGNDTLGSYHAALERLGDDYHGTILIVT 137
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
H R++L + G+N + S + Y A P F+ E G+++
Sbjct: 138 DPNHALRAELLAKQIGMNARVSPTPYCPAI---FPTKGFFWTLS---HEVGGLIV 186
>gi|229520385|ref|ZP_04409810.1| SanA protein [Vibrio cholerae TM 11079-80]
gi|229342483|gb|EEO07476.1| SanA protein [Vibrio cholerae TM 11079-80]
Length = 254
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/230 (14%), Positives = 71/230 (30%), Gaps = 28/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + HL RK+ ++ + G I + Q + Q
Sbjct: 14 VVFSALAHLRRLPWRKLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPF 70
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 71 QVAVVLGTSKYIGKTLNEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHR 118
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL +G+ ++I L+ T + + + +++ +H +
Sbjct: 119 SYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCE 175
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
R+ ++ I + +++ ++ L+E A
Sbjct: 176 RALFIARYQDIQASCLAAPGPSSHSGF----------KVRLREVFARAYA 215
>gi|291246382|ref|YP_003505768.1| protein of unknown function DUF218 [Staphylococcus simulans bv.
staphylolyticus]
gi|290463913|gb|ADD24900.1| protein of unknown function DUF218 [Staphylococcus simulans bv.
staphylolyticus]
Length = 304
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 35/239 (14%)
Query: 6 IFLIVSYWHL-----LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+FL++S + + + + + I L +
Sbjct: 76 VFLLISPFITSYLVDFSNGRIPLLTLVNIYGIIASYIMIIASAFTLSSFLNFFNWK---- 131
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++D IV+LG+G P ++ SRI + + +Y+ K+ C +I+SG
Sbjct: 132 --RRDLKYIVVLGSGLRGDQVTPLLK--------SRIDKAINIYRGQKK----CKMIMSG 177
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + ES+ N + SGV ++DI ETQS +T +N Q S +++ + I +V+
Sbjct: 178 GQGEDELIPESVAMLNYAVNSGVSKEDIITETQSKNTRENIQLSYNLMMGK-PERIAIVT 236
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHL R+ L + I + + ++ ++E+IG L Y+
Sbjct: 237 NYYHLFRALLIAKENKIKCIGYGA-----------PTKLYFSLNAFIREFIGYLAMKYK 284
>gi|228985374|ref|ZP_04145533.1| hypothetical protein bthur0001_20700 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774327|gb|EEM22734.1| hypothetical protein bthur0001_20700 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 201
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 71/168 (42%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 54 YVLILGAKLFGDK--------PSLSLQNRLDVALEYLYSHPE----AKVIVSGGQGEDED 101
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 102 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENVKFSIDLYDVKH---AVVVSNTYHLYR 158
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY+ I+
Sbjct: 159 TKIIAKRLGMKMEALAAETPIRSKR-----------KMYVREYVAIMK 195
>gi|226951670|ref|ZP_03822134.1| protein of hypothetical function DUF218 [Acinetobacter sp. ATCC
27244]
gi|226837586|gb|EEH69969.1| protein of hypothetical function DUF218 [Acinetobacter sp. ATCC
27244]
Length = 284
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 83/244 (34%), Gaps = 28/244 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLK--HLQFSYQRPLL 58
+L + L + + + FF + GW L+ + +
Sbjct: 59 VLPLLLGLFFCLYSFFYYHLERFFFYHFRLHSIWRFGWLCFWVWLISLGYFFNYLNKNNS 118
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ I++LG+G +PS R+ + + + +++
Sbjct: 119 QVEVPTSVAAIIVLGSGIENG--------QPSATLAKRLDRAAPIALTQP----NAKLLL 166
Query: 119 SGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQG---K 174
+GG +E+IV + L + + I LE +S T N + S +++ + +
Sbjct: 167 TGGVDFGETESEAIVMSRYLQQQHHIPATQIILEDKSTSTELNLKNSHPLLQAHKISLQQ 226
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I +V+S +H R+ + G + S PL + L+EY +
Sbjct: 227 PIAIVTSDFHTLRAAAIAKKQGYSNI-------TTIGSTTPLQTRYNAW---LREYFAYV 276
Query: 235 IAYY 238
+
Sbjct: 277 SGWL 280
>gi|302528814|ref|ZP_07281156.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302437709|gb|EFL09525.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 218
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 74/221 (33%), Gaps = 30/221 (13%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+R+I F L+ G + + + + + IV+LG
Sbjct: 15 WVRRIVFGVVLALVAVIGGT---AFRVWQ---------VARENDRTPADAIVVLGAAQYN 62
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS +R+ + +LY T+I +GG + E+ L
Sbjct: 63 GK--------PSEIFTARLEKARQLYTEGVAK----TVITAGGKKSRDNFTEATAGARWL 110
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV + DT ++ + + +K ++++LVS +H RS+ + G+
Sbjct: 111 TKHGVPASATLPVGEGNDTLRSLRAVADQVKARGWRSVVLVSDPWHSYRSRTMSEDLGLE 170
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A+ + +S + +E +L
Sbjct: 171 AWAAPT------HSGPIVQERSTQVRYIFRETGALLFYELT 205
>gi|304392434|ref|ZP_07374375.1| periplasmic protein [Ahrensia sp. R2A130]
gi|303295538|gb|EFL89897.1| periplasmic protein [Ahrensia sp. R2A130]
Length = 189
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 19/181 (10%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG S R + L++ I++ G
Sbjct: 2 ELKSAYAIVVLGAAVWKD-------GRASPALERRTRHAIALHQQG-----LAPILVLSG 49
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+H E+ + GV + + LE +S +TF+N FS+++++ + ++++VS
Sbjct: 50 GLGRHPPTEAKAMAEICMGEGVPQAALLLEGRSTNTFENVAFSAALLREKRVNSVLVVSD 109
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
AYHL R+++ F++ G S + P + + L+E + I +
Sbjct: 110 AYHLPRAKMCFRYLGFIATGSAA-------VAGPTTPWYRTARYWLREIVAIPYYRLSLS 162
Query: 242 R 242
R
Sbjct: 163 R 163
>gi|262046176|ref|ZP_06019139.1| integral membrane protein [Lactobacillus crispatus MV-3A-US]
gi|260573506|gb|EEX30063.1| integral membrane protein [Lactobacillus crispatus MV-3A-US]
Length = 293
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 90/234 (38%), Gaps = 33/234 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ ++FL + S K ++ ++++ + +++ L
Sbjct: 68 IIFFLFLYPLVGRISHDSWLKYPYIFLWLVIIYLVTI-----MMMYTLTSWINLINWH-- 120
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV+LG G P + +RI + +Y +I+SGG
Sbjct: 121 -MPHLDYIVVLGAGIMGTKVTPLL--------AARISRGIEIYHKNP----GSKLIMSGG 167
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E+ + G+ ++DI +E +S T QN QFS +++K +V+S
Sbjct: 168 QGPGEDIPEAAAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTS 225
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+YH+ R+ + + G+ + + ++ ++E+I L+
Sbjct: 226 SYHVYRALVLAKRQGLKCTGYGA-----------KTKWYFTLNAFVREFIAYLV 268
>gi|327458054|gb|EGF04709.1| hypothetical protein HMPREF9586_00155 [Propionibacterium acnes
HL083PA2]
Length = 208
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 61/193 (31%), Gaps = 24/193 (12%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +C + +G + L + + ++ ++LG
Sbjct: 1 MVVSACIAAFVALLGPWALAGALSYG-------KVHDVADTEPRDVAIVLGAQV------ 47
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
PS R+ LY+S K +I+ GD ++ E V L+ G
Sbjct: 48 -LPSGTPSAYLRGRLDVAADLYRSGKA-----KVILVSGDHRETHYNEPKVMKTYLVSKG 101
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V I + LDT+ + + I+V+ YH R+ + G++
Sbjct: 102 VPAARIVEDVAGLDTYDTCVRARRIFG---VDRAIMVTQDYHEIRTVATCRMTGLDAVGV 158
Query: 203 C--SDYLNAYYSI 213
+ + +
Sbjct: 159 PDRTQPRDNVWWY 171
>gi|237719439|ref|ZP_04549920.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293370232|ref|ZP_06616792.1| putative protein SanA [Bacteroides ovatus SD CMC 3f]
gi|299146199|ref|ZP_07039267.1| SanA protein [Bacteroides sp. 3_1_23]
gi|229451299|gb|EEO57090.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292634729|gb|EFF53258.1| putative protein SanA [Bacteroides ovatus SD CMC 3f]
gi|298516690|gb|EFI40571.1| SanA protein [Bacteroides sp. 3_1_23]
Length = 214
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 74/219 (33%), Gaps = 27/219 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
RK+ + + + + I + + K + + N+ +LLG
Sbjct: 2 KRKLLYTTLIIAILCVISILVCNRTIKK---HTVSKLYTEVNTIPSNNVGLLLGT----- 53
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + RI T+ LYK+ K I+ GD +K E L+
Sbjct: 54 -SPKLKNGNNNLYFDYRILATVELYKAGK-----IKYILISGDNRKEDYNEPEEMKKALI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ G+ I L+ T + + + + ++S +H +R+ + GI+
Sbjct: 108 QKGIPEKFIYLDYAGFRTLDSVVRAKEVFGQNRLT---IISQRFHNERAIYLAEKNGIDA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +NAY + ++E + + +
Sbjct: 165 IGYNAQNVNAYAGLKTN----------IRELLARVKMFI 193
>gi|116629737|ref|YP_814909.1| hypothetical protein LGAS_1098 [Lactobacillus gasseri ATCC 33323]
gi|238853386|ref|ZP_04643765.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|282851809|ref|ZP_06261172.1| putative membrane protein [Lactobacillus gasseri 224-1]
gi|311110620|ref|ZP_07712017.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116095319|gb|ABJ60471.1| hypothetical protein LGAS_1098 [Lactobacillus gasseri ATCC 33323]
gi|238833958|gb|EEQ26216.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|282557051|gb|EFB62650.1| putative membrane protein [Lactobacillus gasseri 224-1]
gi|311065774|gb|EFQ46114.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 342
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 25/230 (10%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + L + ++ + L+ F+ +I I + + L K N I
Sbjct: 118 IIAYLFLFPIVGRLTRNNFGTYLYLFVNLTVIYLIFIMMMYTLTSWINLINFKTKKLNYI 177
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG G P + +RI + +Y++ II+SGG +
Sbjct: 178 VVLGAGLIGKKVTPLL--------AARINRGIEVYRNNP----GSKIIMSGGQGPGEEIP 225
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E++ E G+ DI +E +S T QN FS ++K+ +V+++YH+ R+
Sbjct: 226 EAVAMAKYAEEKGISNQDIIVEDKSKTTRQNLAFSHKLMKSN--SRFAIVTNSYHVYRAL 283
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + G++ + + ++ ++E+I L +R
Sbjct: 284 VLAKRMGLDCIGYGA-----------KTKWYFTLNAFVREFIAYLTITWR 322
>gi|116624473|ref|YP_826629.1| hypothetical protein Acid_5395 [Candidatus Solibacter usitatus
Ellin6076]
gi|116227635|gb|ABJ86344.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 195
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 85/209 (40%), Gaps = 23/209 (11%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ + L + + + + L+ ++ R + + ++I++LG
Sbjct: 4 LLWNGIALAAVVVMFYVAFLSLR-IEQQSVR-----EEAQPADVILVLGAA--------E 49
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
R PS +R+ + LY I+ +GG E V + L + GV
Sbjct: 50 YRGRPSPVLRARLDHALDLYSR----KFAPRILTTGGSGGDPIFTEGGVGRSYLTQHGVP 105
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC- 203
D I +ET+ T ++ ++ +++ M+ ++I+VS YH+ R + + G+ S
Sbjct: 106 SDAIIVETEGESTVESTTMAAEIMRRMELHSVIVVSDGYHIYRVKQMLEAHGMTAYGSPR 165
Query: 204 SDYLNAY----YSIIPLSANFYLTELALK 228
D+ + ++ + + + L + +K
Sbjct: 166 PDHSQSPLHLRWNYLKQAFGYLLWTIGVK 194
>gi|116496009|ref|YP_807743.1| hypothetical protein LSEI_2578 [Lactobacillus casei ATCC 334]
gi|191639488|ref|YP_001988654.1| hypothetical protein LCABL_27450 [Lactobacillus casei BL23]
gi|116106159|gb|ABJ71301.1| hypothetical protein LSEI_2578 [Lactobacillus casei ATCC 334]
gi|190713790|emb|CAQ67796.1| Putative uncharacterized protein precursor [Lactobacillus casei
BL23]
gi|327383585|gb|AEA55061.1| Conserved domain protein [Lactobacillus casei LC2W]
gi|327386777|gb|AEA58251.1| Conserved domain protein [Lactobacillus casei BD-II]
Length = 352
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 92/242 (38%), Gaps = 31/242 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
++ L++ + F ++ F L F + L + ++++
Sbjct: 109 IAIGLLLIEIAASFGRRFIPDPLYFSLAIFFGLGGFYVLLTLYNFLTVLILYNFRP---- 164
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC-KQHSMHCTIII 118
+ +++LG G + S SRI ++ Y+ K+ II
Sbjct: 165 --QPHNRTFLIVLGAGLLHGD-------QVSPLLASRIDAAIKFYRKQIKKGRPAPRIIF 215
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII- 177
SGG ++E++ L G+ D LE QS T +N QFS +I G++
Sbjct: 216 SGGKGSDEAISEAMAMQRYALGKGIPEGDTLLEDQSTTTLENMQFSKRLITQEIGESPYK 275
Query: 178 --LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YHL R+ ++ + GI ++ ++L ++EY+ +++
Sbjct: 276 ASFFTNNYHLFRAGIFARMAGIAANGVG-----------GATSFYFLPNAVIREYLALVV 324
Query: 236 AY 237
Y
Sbjct: 325 LY 326
>gi|229161248|ref|ZP_04289235.1| hypothetical protein bcere0009_20370 [Bacillus cereus R309803]
gi|228622344|gb|EEK79183.1| hypothetical protein bcere0009_20370 [Bacillus cereus R309803]
Length = 166
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 19 YVLILGAKLFGD--------RPSLSLQNRLDVALEYLYSHPE----AKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDDSRILIEDQSTNTYENVKFSMDLYDVKH---AVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 124 TKIIAKRLGMKMEALAAETPMRSKR-----------KMYVREYAAIMK 160
>gi|30262287|ref|NP_844664.1| hypothetical protein BA_2278 [Bacillus anthracis str. Ames]
gi|47527579|ref|YP_018928.1| hypothetical protein GBAA_2278 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185134|ref|YP_028386.1| hypothetical protein BAS2124 [Bacillus anthracis str. Sterne]
gi|49479213|ref|YP_036390.1| hypothetical protein BT9727_2062 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65319584|ref|ZP_00392543.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|118477705|ref|YP_894856.1| hypothetical protein BALH_2039 [Bacillus thuringiensis str. Al
Hakam]
gi|167632793|ref|ZP_02391119.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|177649292|ref|ZP_02932294.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|196039956|ref|ZP_03107259.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196046918|ref|ZP_03114139.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|218903420|ref|YP_002451254.1| hypothetical protein BCAH820_2304 [Bacillus cereus AH820]
gi|225864256|ref|YP_002749634.1| hypothetical protein BCA_2360 [Bacillus cereus 03BB102]
gi|229600915|ref|YP_002866624.1| hypothetical protein BAA_2343 [Bacillus anthracis str. A0248]
gi|254684861|ref|ZP_05148721.1| hypothetical protein BantC_13530 [Bacillus anthracis str.
CNEVA-9066]
gi|254722269|ref|ZP_05184057.1| hypothetical protein BantA1_07359 [Bacillus anthracis str. A1055]
gi|254737308|ref|ZP_05195012.1| hypothetical protein BantWNA_19319 [Bacillus anthracis str. Western
North America USA6153]
gi|254743507|ref|ZP_05201192.1| hypothetical protein BantKB_21307 [Bacillus anthracis str. Kruger
B]
gi|254751624|ref|ZP_05203661.1| hypothetical protein BantV_04116 [Bacillus anthracis str. Vollum]
gi|254760143|ref|ZP_05212167.1| hypothetical protein BantA9_17676 [Bacillus anthracis str.
Australia 94]
gi|30256918|gb|AAP26150.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47502727|gb|AAT31403.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179061|gb|AAT54437.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49330769|gb|AAT61415.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118416930|gb|ABK85349.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|167531605|gb|EDR94270.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|172084366|gb|EDT69424.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|196022293|gb|EDX60979.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196029215|gb|EDX67819.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|218536887|gb|ACK89285.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786065|gb|ACO26282.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|229265323|gb|ACQ46960.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 185
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S +I+SGG +
Sbjct: 38 YVLILGAKLFGDK--------PSLSLQNRLDVALEYLYSHP----DVKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDLYDVKH---AVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAAETPMRSKR-----------KMYVREYAAIMK 179
>gi|289425979|ref|ZP_06427726.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289428008|ref|ZP_06429712.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|295131649|ref|YP_003582312.1| hypothetical protein HMPREF0675_5190 [Propionibacterium acnes
SK137]
gi|289153522|gb|EFD02236.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289158891|gb|EFD07091.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|291377167|gb|ADE01022.1| conserved hypothetical protein [Propionibacterium acnes SK137]
gi|313763777|gb|EFS35141.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
gi|313771794|gb|EFS37760.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
gi|313793673|gb|EFS41704.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
gi|313802985|gb|EFS44193.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
gi|313808396|gb|EFS46863.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
gi|313810616|gb|EFS48330.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
gi|313816904|gb|EFS54618.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
gi|313818182|gb|EFS55896.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
gi|313821040|gb|EFS58754.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
gi|313824082|gb|EFS61796.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
gi|313827172|gb|EFS64886.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
gi|313829705|gb|EFS67419.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
gi|313831658|gb|EFS69372.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
gi|313834812|gb|EFS72526.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
gi|313839386|gb|EFS77100.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
gi|314916668|gb|EFS80499.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
gi|314918874|gb|EFS82705.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
gi|314920885|gb|EFS84716.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
gi|314927065|gb|EFS90896.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
gi|314932327|gb|EFS96158.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
gi|314956603|gb|EFT00855.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
gi|314959483|gb|EFT03585.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
gi|314961887|gb|EFT05988.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
gi|314964678|gb|EFT08778.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
gi|314968916|gb|EFT13014.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
gi|314975008|gb|EFT19103.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
gi|314977895|gb|EFT21989.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
gi|314979615|gb|EFT23709.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
gi|314984697|gb|EFT28789.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
gi|314988351|gb|EFT32442.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
gi|314990247|gb|EFT34338.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
gi|315079332|gb|EFT51333.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
gi|315082373|gb|EFT54349.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
gi|315083835|gb|EFT55811.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
gi|315087295|gb|EFT59271.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
gi|315089713|gb|EFT61689.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
gi|315095586|gb|EFT67562.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
gi|315100252|gb|EFT72228.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
gi|315102576|gb|EFT74552.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
gi|315109664|gb|EFT81640.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
gi|327326624|gb|EGE68412.1| putative integral membrane protein [Propionibacterium acnes
HL096PA3]
gi|327332888|gb|EGE74620.1| putative integral membrane protein [Propionibacterium acnes
HL096PA2]
gi|327335292|gb|EGE77002.1| putative integral membrane protein [Propionibacterium acnes
HL097PA1]
gi|327447716|gb|EGE94370.1| hypothetical protein HMPREF9571_00999 [Propionibacterium acnes
HL043PA2]
gi|327448591|gb|EGE95245.1| hypothetical protein HMPREF9570_00149 [Propionibacterium acnes
HL043PA1]
gi|327449557|gb|EGE96211.1| hypothetical protein HMPREF9568_00216 [Propionibacterium acnes
HL013PA2]
gi|327455902|gb|EGF02557.1| hypothetical protein HMPREF9581_00176 [Propionibacterium acnes
HL087PA3]
gi|327456005|gb|EGF02660.1| hypothetical protein HMPREF9584_00892 [Propionibacterium acnes
HL092PA1]
gi|328757215|gb|EGF70831.1| hypothetical protein HMPREF9579_00146 [Propionibacterium acnes
HL087PA1]
gi|328757406|gb|EGF71022.1| hypothetical protein HMPREF9563_00955 [Propionibacterium acnes
HL020PA1]
gi|328757598|gb|EGF71214.1| hypothetical protein HMPREF9588_01226 [Propionibacterium acnes
HL025PA2]
gi|328762014|gb|EGF75520.1| putative integral membrane protein [Propionibacterium acnes
HL099PA1]
Length = 208
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 61/193 (31%), Gaps = 24/193 (12%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +C + +G + L + + ++ ++LG
Sbjct: 1 MVVSTCIAAFVALLGPWALAGALSYG-------KVHDVADTEPRDVAIVLGAQV------ 47
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
PS R+ LY+S K +I+ GD ++ E V L+ G
Sbjct: 48 -LPSGTPSAYLRGRLDVAADLYRSGKA-----KVILVSGDHRETHYNEPKVMKTYLVSKG 101
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V I + LDT+ + + I+V+ YH R+ + G++
Sbjct: 102 VPAARIVEDVAGLDTYDTCVRARRIFG---VDRAIMVTQDYHEIRTVATCRMTGLDAVGV 158
Query: 203 C--SDYLNAYYSI 213
+ + +
Sbjct: 159 PDRTQPRDNVWWY 171
>gi|253578606|ref|ZP_04855878.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850924|gb|EES78882.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 177
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 72/200 (36%), Gaps = 28/200 (14%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
++L + + + + I++LG + R ++
Sbjct: 3 LVLAEAARNINIAAVRMRKHPNLEYIIVLGAHVEG--------TRLTKALLERTRRALQY 54
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
+ + ++SGG + E+ N L+E G++R+ + LE +S T +N +F
Sbjct: 55 MEENPET----KAVLSGGKGDGESITEAQAMCNYLVEHGIDRERLILEEKSTSTTENLKF 110
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYY-SIIPLSANFY 221
S MI ++ +V++ +H+ R + G S Y + IP
Sbjct: 111 SLGMIGLNH--SVGIVTNNFHVFRGTAIGKKCGCREIYPIPSRYRSWRLLIYIP------ 162
Query: 222 LTELALKEYIGILIAYYRGN 241
+E + I+ GN
Sbjct: 163 ------REILAIIKDKLMGN 176
>gi|59712167|ref|YP_204943.1| SanA protein [Vibrio fischeri ES114]
gi|59480268|gb|AAW86055.1| SanA protein [Vibrio fischeri ES114]
Length = 225
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 27/219 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
I K + +++ + + P + + + + + + ++LG
Sbjct: 8 IFKKWIKIVLIVVIAATSAILTPDVYMSL--STQSQLYKQVEALPEQETALVLG------ 59
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
T IR + RI + L+K K + GD E LL
Sbjct: 60 -TSKYIRRTLNPYYQYRIDAAIELFKQNKVSHFLLS-----GDNAHRSYNEPWTMKRDLL 113
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
++G+ D I L+ T + Q + + +VS +H +R+ HF ++T
Sbjct: 114 KAGIPEDRITLDYAGFRTLDSVQRAKEIFDANSLT---IVSQQFHCQRAVFIANHFDMDT 170
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
P + + T++ +E + A
Sbjct: 171 VCLVV----------PSPSGWANTKIRFREVLARTKAVL 199
>gi|29375933|ref|NP_815087.1| hypothetical protein EF1366 [Enterococcus faecalis V583]
gi|256853003|ref|ZP_05558373.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256958856|ref|ZP_05563027.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256962050|ref|ZP_05566221.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|257078888|ref|ZP_05573249.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|257082665|ref|ZP_05577026.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257086869|ref|ZP_05581230.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257415976|ref|ZP_05592970.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|257419178|ref|ZP_05596172.1| predicted protein [Enterococcus faecalis T11]
gi|257422744|ref|ZP_05599734.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|29343395|gb|AAO81157.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|256711462|gb|EEU26500.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256949352|gb|EEU65984.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256952546|gb|EEU69178.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256986918|gb|EEU74220.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256990695|gb|EEU77997.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256994899|gb|EEU82201.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257157804|gb|EEU87764.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257161006|gb|EEU90966.1| predicted protein [Enterococcus faecalis T11]
gi|257164568|gb|EEU94528.1| conserved hypothetical protein [Enterococcus faecalis X98]
Length = 359
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P K + I
Sbjct: 129 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------KYTQDYI 179
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 180 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 232
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 233 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 292
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 293 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 333
>gi|299137094|ref|ZP_07030277.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
gi|298601609|gb|EFI57764.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
Length = 222
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 18/196 (9%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
+ + + + + I + G PS ++R+ + +
Sbjct: 29 AVAWFGWVYREIKFTADIDNAQTADAIAVFGAA--------EYAGRPSPVLHARLDKAVA 80
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
LY+ + + GG + G E V + LL +GV D I ET+S DT Q +
Sbjct: 81 LYQRGIAP---VVVTLGGGGDKDSGNTEGGVGRDYLLANGVPYDKIIAETESFDTEQQVE 137
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL 222
+ + + ++I++VS HL R L + G+ + + +
Sbjct: 138 NLALIAEREHFRHIVVVSDGTHLFRIALLCRRAGLQVY-------TSPRAPLGHIDELDE 190
Query: 223 TELALKEYIGILIAYY 238
+ + E + +
Sbjct: 191 AQRIMHEMLSYTALRF 206
>gi|257454427|ref|ZP_05619689.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257448193|gb|EEV23174.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 274
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/248 (18%), Positives = 91/248 (36%), Gaps = 43/248 (17%)
Query: 3 LSWIFLI-------VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
+ IFL + + S++K++ + + I + I + L ++
Sbjct: 54 IGLIFLGHAVYWERIQLYLASQPSLKKLWQLVWLLFFVWLISFCIFVSYL--------KQ 105
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ K I++LG GT A+++ R+ + + + +
Sbjct: 106 HFNTDNHPKAAQAIIVLGGGTKDNKPTDAVKL--------RLDKASEVIRRFA----NAL 153
Query: 116 IIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG- 173
+I SGG ++E+ + L + G+ +I LE QS T N S ++
Sbjct: 154 VITSGGFDAGEDVSEAKAMADYLHDTYGISLANISLEEQSTSTELNFVHSKKILAQQGIA 213
Query: 174 --KNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ II V+S +H R+ L + G N + SD + I P + +EY
Sbjct: 214 LNQPIIAVTSDFHTLRASLIGKRQGYTNLQVVGSD---TPWYIRP--------NVWFREY 262
Query: 231 IGILIAYY 238
+ +
Sbjct: 263 FAFISGWL 270
>gi|256390075|ref|YP_003111639.1| hypothetical protein Caci_0865 [Catenulispora acidiphila DSM 44928]
gi|256356301|gb|ACU69798.1| protein of unknown function DUF218 [Catenulispora acidiphila DSM
44928]
Length = 350
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
L F ++ +G + + ++ + +V+LG G + +
Sbjct: 144 LAFLFFCYLSYGFLYRRM---------------PIRRVPDFVVILGAGLMGGRRVSPLLA 188
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+ + L ++ +I+SGG L+E+ N L+E+G D
Sbjct: 189 SRLERGRAVYESLSALAQNSGDTQRVPMLIVSGGKGSDERLSEAEAMENYLVEAGFPADR 248
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I E QS T +N +S+++++ + G ++V++ +H R+ L + + + S
Sbjct: 249 ILKEDQSSTTEENLLYSAALMRENRPEGYRCVVVTNDFHSYRAALIARDLDVPAQVVGS- 307
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+A ++L ++E+I + + Y++
Sbjct: 308 ----------PTAAYFLPSATIREFIAVFVRYWK 331
>gi|113866057|ref|YP_724546.1| hypothetical protein H16_A0026 [Ralstonia eutropha H16]
gi|113524833|emb|CAJ91178.1| hypothetical integral membrane protein [Ralstonia eutropha H16]
Length = 253
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 86/242 (35%), Gaps = 34/242 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL+W + V++W ++++ + I + + + +
Sbjct: 38 LLLAWQWPRVAHWRAASHRRQQLWQAAWIAFALWLATVAIFFYNIHRSTEAAIP------ 91
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IV+LG+GT P + +R+ + ++ + Q + +SG
Sbjct: 92 -GSSPVKAIVILGSGTPNCVASPTL--------VARLDQGLKQAQRWPQ----AKVAVSG 138
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G E+ + L++ GV D + E +S T +N FS +++ I+
Sbjct: 139 GQDFGLRCREADIMAEYLIDRGVAADRVVREGRSTSTEENLLFSRRLLEEQGIAATDPIV 198
Query: 178 LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V+S +H++R+ + G + + L+EY +
Sbjct: 199 VVTSDFHVRRAVRIARKAGFGEVAGVGAGTPL-----------YLRYNAWLREYFAAISG 247
Query: 237 YY 238
+
Sbjct: 248 WV 249
>gi|163940067|ref|YP_001644951.1| hypothetical protein BcerKBAB4_2098 [Bacillus weihenstephanensis
KBAB4]
gi|163862264|gb|ABY43323.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 185
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + + + +I+SGG + + E+ N L+ G++ +
Sbjct: 49 DRPSLSLQNRLDIALEYLHAHPE----VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDEN 104
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E +S +T++N +FS + + ++VS+ YHL R+++ + GI +A ++
Sbjct: 105 RILIEDRSTNTYENLKFSMDLYDVK---HAVVVSNTYHLYRTKIIAKRLGIKMEALAAET 161
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
+ ++EY I+
Sbjct: 162 PRRSKK-----------KAYVREYAAIMK 179
>gi|301053815|ref|YP_003792026.1| hypothetical protein BACI_c22410 [Bacillus anthracis CI]
gi|300375984|gb|ADK04888.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 185
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 68/168 (40%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S +I+SGG +
Sbjct: 38 YVLILGAKLFGDK--------PSLSLQNRLDVALEYLYSHP----DVKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDLYDVKH---AVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ + ++ ++ ++EY I+
Sbjct: 143 TKIIAKRLGMKMETLAAETPMRSKR-----------KMYVREYAAIMK 179
>gi|168213058|ref|ZP_02638683.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
gi|170715436|gb|EDT27618.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
Length = 257
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 96/249 (38%), Gaps = 37/249 (14%)
Query: 1 MLLSWIFLIVSYW--HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
++L + ++ + + LL K + +L I II +
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKTVYKPMKILALICISIFIIVEGAI---------IFY 88
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K + IV+LG G + R+ +T+ + + I++
Sbjct: 89 PKKSLKSCDYIVVLGAGIRGE--------NLTATLRDRLDKTIEYLEK---TGFNGEIVV 137
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QG 173
SGG + E+ L+E+GV +D I LE ++ T++N +S +I+N+ +
Sbjct: 138 SGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKD 197
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+I++V++ +H RS L + G N Y + + + + +E+
Sbjct: 198 LDILIVTTDFHAMRSNLLAKRNGYN----------KAYLYTSKTQWYLVPSMYAREFFAF 247
Query: 234 LIAYYRGNR 242
+Y+ R
Sbjct: 248 CKSYFLDKR 256
>gi|229138983|ref|ZP_04267560.1| hypothetical protein bcere0013_20960 [Bacillus cereus BDRD-ST26]
gi|228644338|gb|EEL00593.1| hypothetical protein bcere0013_20960 [Bacillus cereus BDRD-ST26]
Length = 162
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 26 DRPSLSLQNRLDVALEYLYSHPE----VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDER 81
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 82 RILIEDQSTNTYENVKFSIDLYDVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 138
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY+ I+
Sbjct: 139 PIRSKR-----------KMYVREYVAIMK 156
>gi|294651352|ref|ZP_06728671.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292822754|gb|EFF81638.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 284
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 83/244 (34%), Gaps = 28/244 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLK--HLQFSYQRPLL 58
+L + L + + + FF + GW L+ + +
Sbjct: 59 VLPLLLGLFFCLYSFFYYHLERFFFYHFRLHSIWRFGWLCFWVWLISLGYFFNYLNKNNS 118
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ I++LG+G +PS R+ + + + +++
Sbjct: 119 QVEVPTSVAAIIVLGSGIENG--------QPSATLAKRLDRAAPIALTQP----NAKLLL 166
Query: 119 SGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQG---K 174
+GG +E+IV + L + + I LE +S T N + S +++ + +
Sbjct: 167 TGGVDFGETESEAIVMSRYLQQQHHIPATQIILEDKSTSTELNLKNSQPLLQAHKISLQQ 226
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I +V+S +H R+ + G + S PL + L+EY +
Sbjct: 227 PIAIVTSDFHTLRAAAIAKKQGYSNI-------TTIGSTTPLQTRYNAW---LREYFAYV 276
Query: 235 IAYY 238
+
Sbjct: 277 SGWL 280
>gi|229172971|ref|ZP_04300523.1| hypothetical protein bcere0006_20790 [Bacillus cereus MM3]
gi|228610491|gb|EEK67761.1| hypothetical protein bcere0006_20790 [Bacillus cereus MM3]
Length = 201
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 54 YVLILGAKLFGD--------RPSLSLQNRLDVALEYLVSHPE----AKVIVSGGQGEDED 101
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 102 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLYDVKH---AVVVSNTYHLYR 158
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 159 TKIIAKRLGMKMEALAAETPMRSKK-----------KMYVREYAAIMK 195
>gi|318081213|ref|ZP_07988545.1| integral membrane protein [Streptomyces sp. SA3_actF]
Length = 353
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 26/172 (15%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ V+ G G PS R+ RLY + + T ++
Sbjct: 22 ADVGRAPVAVVFGAGLWDGK--------PSPYLAHRLDAAARLYAAGR-----VTAVLVT 68
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD + E + L +GV R + + DT+ + + + +LVS
Sbjct: 69 GDNSRTSYDEPTAMRDYLARAGVPRRQVVRDYAGFDTWDSCVRAHRVFG---VDRAVLVS 125
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+H++R+ + GI+ + + + A++E +
Sbjct: 126 QGFHIRRAVALCRAAGIDAQGVAARDPHDVTWY----------YGAIRELLA 167
>gi|262394509|ref|YP_003286363.1| SanA protein [Vibrio sp. Ex25]
gi|262338103|gb|ACY51898.1| SanA protein [Vibrio sp. Ex25]
Length = 224
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 27/214 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ +L + I ++ + + + + V+LG I
Sbjct: 1 MILSISVLSLLVSVIAIDRWVVLQAK---ESIFTEYEPIPQHEVAVVLGTSKYIGKI--- 54
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ RI + LY K + GD E LL++GV
Sbjct: 55 ----LNTYYTHRINAAIELYNQGKVKQFLLS-----GDNAHRSYNEPWTMKRDLLKAGVP 105
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I L+ T + + + + + ++V+ +H +R+ + I+ +
Sbjct: 106 EEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFHCERALFIADAYNIDAQCLAV 162
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
N T + ++E + + A+
Sbjct: 163 AGPTT---------NKQKTSMRIRELLARVKAFL 187
>gi|210623051|ref|ZP_03293538.1| hypothetical protein CLOHIR_01488 [Clostridium hiranonis DSM 13275]
gi|210153854|gb|EEA84860.1| hypothetical protein CLOHIR_01488 [Clostridium hiranonis DSM 13275]
Length = 251
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/244 (17%), Positives = 95/244 (38%), Gaps = 36/244 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L I L+ + + R ++ + + I + + +++ +
Sbjct: 33 VLGTICLVYHFTRDKIKKHRWLYMIVKICAAVAIIIFVTVEGMIIA----------FPKK 82
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ + I++LG EP R+ + K + C I++SGG
Sbjct: 83 STENCDYIIVLGARVMGN--------EPGLTLKGRLDRALEYV---KSNDDDCKIVVSGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKNI 176
++E+ L+E G++ + I E +S++T QN +FS I+N ++
Sbjct: 132 KGDGENISEAEAMKRYLVERGIKPEMIIKEDKSVNTMQNFEFSRDKIENDSKKKVADVDV 191
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V++ +H RS Y + G + ++ + +IP+ ++E+ I+
Sbjct: 192 KVVTTDFHAFRSDKYAKMDGYKNISFYTE--RTKWYLIPVFY--------VREFFAIIKM 241
Query: 237 YYRG 240
G
Sbjct: 242 MLVG 245
>gi|289426184|ref|ZP_06427930.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289153349|gb|EFD02064.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|313791546|gb|EFS39664.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
gi|313802367|gb|EFS43593.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
gi|313812480|gb|EFS50194.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
gi|313838950|gb|EFS76664.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
gi|314962443|gb|EFT06544.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
gi|315077359|gb|EFT49419.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
gi|327455232|gb|EGF01887.1| hypothetical protein HMPREF9584_01188 [Propionibacterium acnes
HL092PA1]
Length = 349
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 92/246 (37%), Gaps = 38/246 (15%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
L++ W L +S+ F + + + G + L +L + P
Sbjct: 104 LLVLMAWCL--RSVFSPFERWAVAGISATMALGWLSFGFLGYLASVFVIHRAKP--LPGN 159
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG+ + SR+ + +++ + H II SGG
Sbjct: 160 HQIVVLGSALVKGKVPKLL--------ASRLDRGIGQWRTDRDAGFHSVIIPSGGKGDDE 211
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---------------KNM 171
AE L+E G+ R+ + +E Q+ +T +N S ++ +
Sbjct: 212 PRAEGEAMAEYLVEHGIPRECVVVENQAANTDENISLSRQVMPTQVRSVPSRRAEAARQR 271
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
Q +++ +S+YH R+ + G+ + + +A ++L L+EYI
Sbjct: 272 QNPQVVVATSSYHAVRAAELCRRQGLRVRVLGA-----------PTATYFLPSAMLREYI 320
Query: 232 GILIAY 237
+L +
Sbjct: 321 ALLASR 326
>gi|239944014|ref|ZP_04695951.1| hypothetical protein SrosN15_23646 [Streptomyces roseosporus NRRL
15998]
Length = 357
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 92/237 (38%), Gaps = 31/237 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + +V L S F+ +L+ ++ + + + L +
Sbjct: 124 IFAVLALVVTADYLGGSDAYRSFILAVVLITGYVAFLFLCFLAYAFLYGR-------IRV 176
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII-ISGG 121
+ D + +V+LG+G +P + SR+ +R+ + ++ +SGG
Sbjct: 177 RGDVDFVVMLGSGLIGGERVPPL-------LASRLRSGLRIQERQIARGGPAPVLLVSGG 229
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVS 180
L E+ L+ G + D + E +S T +N +FS S+++ +G ++V+
Sbjct: 230 QGPDEKLPEAEAMGRWLVAEGADPDLVLEENRSRTTTENLRFSRSLMEGADEGYVCVVVT 289
Query: 181 SAYHLKRSQLYFQHFGI--NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +H R+ + + G+ S + A ++ ++E++ +
Sbjct: 290 NNFHAFRAAMTARKEGVRGQVIGSPT-------------AAYFWPSATIREFVAVFW 333
>gi|89069286|ref|ZP_01156649.1| hypothetical protein OG2516_14486 [Oceanicola granulosus HTCC2516]
gi|89045162|gb|EAR51230.1| hypothetical protein OG2516_14486 [Oceanicola granulosus HTCC2516]
Length = 156
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 21/173 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I++LG P +R R LY + + ++I G +H
Sbjct: 2 TAILILGAAVWPHGPSPTLR--------RRTLHAAGLYHAGRG-----RLLIPCGGQGRH 48
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
G E+ V LL +GV I E +S T++N F+ ++ +++V+ YH+
Sbjct: 49 GPPEAEVMRALLLGAGVPDAAILQERRSTSTWENLLFARPLLAAQGETRVLIVTDRYHVP 108
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R++L + G+ + ++ +P AL+E ++ R
Sbjct: 109 RARLAARRMGLTAAGAPPPLRGSH---VPT-----QLRQALREVPALVWYAMR 153
>gi|229096776|ref|ZP_04227746.1| hypothetical protein bcere0020_20230 [Bacillus cereus Rock3-29]
gi|229115758|ref|ZP_04245160.1| hypothetical protein bcere0017_20490 [Bacillus cereus Rock1-3]
gi|228667641|gb|EEL23081.1| hypothetical protein bcere0017_20490 [Bacillus cereus Rock1-3]
gi|228686618|gb|EEL40526.1| hypothetical protein bcere0020_20230 [Bacillus cereus Rock3-29]
Length = 166
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 30 DRPSLSLQNRLDVALEYLYSHPE----VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDES 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E +S +T++N +FS + ++VS+ YHL R+++ + GI +A ++
Sbjct: 86 RILMEDRSTNTYENLKFSMDLFDVKH---AVVVSNTYHLYRTKIIARRLGIKMEALAAET 142
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 143 PMRSKR-----------KMYVREYAAIMK 160
>gi|327330943|gb|EGE72687.1| hypothetical protein HMPREF9337_01510 [Propionibacterium acnes
HL096PA3]
Length = 349
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 92/246 (37%), Gaps = 38/246 (15%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
L++ W L +S+ F + + + G + L +L + P
Sbjct: 104 LLVLMAWCL--RSVFSPFEPWAVAGISATMALGWLSFGFLGYLASVFVIHRAKP--LPGN 159
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG+ + SR+ + +++ + H II SGG
Sbjct: 160 HQIVVLGSALVKGKVPKLL--------ASRLDRGIGQWRTDRDAGFHSVIIPSGGKGDDE 211
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---------------KNM 171
AE L+E G+ R+ + +E Q+ +T +N S ++ +
Sbjct: 212 PRAEGEAMAEYLVEHGIPRECVVVENQAANTDENISLSRQVMPTQVRSVPSRRAEAARQR 271
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
Q +++ +S+YH R+ + G+ + + +A ++L L+EYI
Sbjct: 272 QNPQVVVATSSYHAVRAAELCRRQGLRVRVLGA-----------PTATYFLPSAMLREYI 320
Query: 232 GILIAY 237
+L +
Sbjct: 321 ALLASR 326
>gi|227878475|ref|ZP_03996414.1| membrane protein [Lactobacillus crispatus JV-V01]
gi|227861926|gb|EEJ69506.1| membrane protein [Lactobacillus crispatus JV-V01]
Length = 278
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 90/234 (38%), Gaps = 33/234 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ ++FL + S K ++ ++++ + +++ L
Sbjct: 53 IIFFLFLYPLVGRISHDSWLKYPYIFLWLVIIYLVTI-----MMMYTLTSWINLINWH-- 105
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV+LG G P + +RI + +Y +I+SGG
Sbjct: 106 -MPHLDYIVVLGAGIMGTKVTPLL--------AARISRGIEIYHKNP----GSKLIMSGG 152
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E+ + G+ ++DI +E +S T QN QFS +++K +V+S
Sbjct: 153 QGPGEDIPEAAAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTS 210
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+YH+ R+ + + G+ + + ++ ++E+I L+
Sbjct: 211 SYHVYRALVLAKRQGLKCTGYGA-----------KTKWYFTLNAFVREFIAYLV 253
>gi|284049952|ref|ZP_06380162.1| hypothetical protein AplaP_00605 [Arthrospira platensis str.
Paraca]
gi|291568189|dbj|BAI90461.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 229
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 76/217 (35%), Gaps = 23/217 (10%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + +L+ S IG + P +L L + R + + ++ G G
Sbjct: 14 KWLIIHWRLLLVLSVIGGLLTPFVLNLYINLLTQTRRYTEIADVPEKPVAIVFGAGLWAD 73
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P+ RI + LYK + I+ GD E + +
Sbjct: 74 -------GTPTPMLADRIQGAIDLYKLGRVEK-----ILMTGDNGTPEYNEVVAMQLYAI 121
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV +DI+L+ T+++ + + + +L++ YHL R+ GI+
Sbjct: 122 DQGVPSNDIRLDYAGFSTYESCYRAREIFG---IETAVLITQQYHLPRAVYICNRLGIDA 178
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + S FY +E + ++ A
Sbjct: 179 IGFGT---PDWGKFRDDSMRFYTR----RELLAVVKA 208
>gi|281354944|ref|ZP_06241438.1| protein of unknown function DUF218 [Victivallis vadensis ATCC
BAA-548]
gi|281317824|gb|EFB01844.1| protein of unknown function DUF218 [Victivallis vadensis ATCC
BAA-548]
Length = 225
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 20/206 (9%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
V + + RK ++ L + + + + + +P+ ++
Sbjct: 3 FVGFKTIF--KFRKRLMIAAGFCLIAGVLFLWGADRAVAAARGR---IFSAPELIPPRDV 57
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
++LG T + P+ R+ RLY + K +I GD ++
Sbjct: 58 ALVLG-------TSKQAKYGPNLYFRYRMDAAARLYHAGKVRK-----LIVSGDNRRRDY 105
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E L+E GV +DI + L T + + + I +VS H +R+
Sbjct: 106 NEPEDMRAALIERGVAPEDIYADYAGLRTLDSVIRAKKIFGQ---TRITVVSQKDHCERA 162
Query: 189 QLYFQHFGINTKASCSDYLNAYYSII 214
++ GI+ + ++ +
Sbjct: 163 LYIARNHGIDAVGFAARDVSLRRFRL 188
>gi|257089760|ref|ZP_05584121.1| predicted protein [Enterococcus faecalis CH188]
gi|256998572|gb|EEU85092.1| predicted protein [Enterococcus faecalis CH188]
Length = 359
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P + + I
Sbjct: 129 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------RYTQDYI 179
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 180 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 232
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 233 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 292
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 293 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 333
>gi|269120765|ref|YP_003308942.1| hypothetical protein Sterm_2157 [Sebaldella termitidis ATCC 33386]
gi|268614643|gb|ACZ09011.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 243
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 75/184 (40%), Gaps = 24/184 (13%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+P + + +V+LG+G S + R + + K +
Sbjct: 75 NVKYDNPSGAQKSDFVVVLGSGLRYG-------TYLSPEGKRRSDKAIEYLKEYPHLN-- 125
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+ ++GG + ES++ LE+G++ + I LE +S +T +N +F +K+
Sbjct: 126 --VFLTGGQGIDEKVPESVIMKEYFLENGIDENRIFLEDKSTNTNENIKFYIDALKDTDM 183
Query: 174 KNIIL--VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ + V+S +H+ R+ + +H+ + CS N S IP ++E +
Sbjct: 184 EYHNILLVTSDFHMPRAGVIARHYNLTVYPLCSKTRN--ISFIPN---------IMREEL 232
Query: 232 GILI 235
+
Sbjct: 233 AFIK 236
>gi|259503279|ref|ZP_05746181.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|259168734|gb|EEW53229.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
Length = 278
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 91/233 (39%), Gaps = 30/233 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
LI L Q + + LL + +L+ L L P
Sbjct: 52 LLICLPGLLGSQPENRAGMIWQLWLLTTVTAGLATVGLLIFSLAVGLLSWRLHP---HHA 108
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ +++LG G P + +R+ + ++ TI++SGG
Sbjct: 109 DYLIVLGAGLAQGKVPPVL--------AARLTRAAQFWQRQP----TVTIVVSGGRVHGD 156
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKNIILVSSA 182
+ E+ LLE G+ + + E+Q+ +T+QN +S +I +++V+S+
Sbjct: 157 QVTEAAAMAAFLLECGLPPEKLLQESQARNTWQNLAYSQRLITQHWSGTGQPRVVVVTSS 216
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+H+ R+ +Y + G + + + +PL+ +++Y+GIL
Sbjct: 217 FHVPRAWIYSRQLGQRYQFLPA---PTPWHYLPLA--------LVRDYLGILR 258
>gi|108804095|ref|YP_644032.1| hypothetical protein Rxyl_1256 [Rubrobacter xylanophilus DSM 9941]
gi|108765338|gb|ABG04220.1| protein of unknown function DUF218 [Rubrobacter xylanophilus DSM
9941]
Length = 195
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 67/181 (37%), Gaps = 18/181 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ V+LG+ PS +R RLY+ + ++I
Sbjct: 26 PRPGGAEVAVVLGSQVLPG-------GRPSGTLMARTLHAARLYRGGR-----VRLLIPT 73
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +H +E+ + L +GV + LE ++L T+ +A++ S M + + +++V+
Sbjct: 74 GGVGRHPPSEAEIMARLLRGAGVPGRAVLLEDRALSTWDSARYVSRMARGLGVGRVLVVT 133
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
H R+ F+H G+ Y + + + + +E + R
Sbjct: 134 DPLHCVRTVAAFRHAGLEAIPEPV-YSSPMWRV-----RWLRLGQFFREMGALAWYRARH 187
Query: 241 N 241
Sbjct: 188 G 188
>gi|154502819|ref|ZP_02039879.1| hypothetical protein RUMGNA_00633 [Ruminococcus gnavus ATCC 29149]
gi|153796702|gb|EDN79122.1| hypothetical protein RUMGNA_00633 [Ruminococcus gnavus ATCC 29149]
Length = 264
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/255 (18%), Positives = 94/255 (36%), Gaps = 38/255 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFS------------FIGWGIIPTILLKHL 49
L + + I+ ++ S F+M + F + + + +L
Sbjct: 31 LFLFYYGILCFYTGKWDSTFARFWMVAGIGHFLMIPATKEEVTRKLLFFCVAGIWILFLA 90
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ + P KK+ +++LG +R E S R + LY
Sbjct: 91 VEFFIVRAMRPGRKKNCRYLIVLGA---------QVRGERITDSLKRRLDAALLYHQ--- 138
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
II+SGG + ++E+ L E V+ + I LE QS T +N +FS + ++
Sbjct: 139 VCPSVKIIVSGGQGKGEDVSEAYAMAQYLREHEVKDEQIMLEDQSRTTRENLRFSKAYLE 198
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALK 228
++ + +V++ +HL R+ L + G N + ++
Sbjct: 199 ELK-TPVGIVTNNFHLFRALLIGRSEGYENLTGIAAG-----------CNRILFLNYMVR 246
Query: 229 EYIGILIAYY-RGNR 242
E+ ++ + RG +
Sbjct: 247 EFFAVVWLWIQRGKK 261
>gi|314935744|ref|ZP_07843096.1| putative membrane protein [Staphylococcus hominis subsp. hominis
C80]
gi|313656309|gb|EFS20049.1| putative membrane protein [Staphylococcus hominis subsp. hominis
C80]
Length = 318
Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 103/263 (39%), Gaps = 48/263 (18%)
Query: 1 MLLSWIFLIVSYWHLLCQSI---------RKIFFMSCFMLLFSFIGWGIIPT----ILLK 47
+++S I L+V + HL R++ F+ +F ++ +P L
Sbjct: 58 IIISTIGLLVKHSHLFKIKKGTCFLNKMFRRLINGVLFIGIFIYLSTIPLPILNGMFLWI 117
Query: 48 HLQFS-----------YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
L + + K ++I++LG G P + SR
Sbjct: 118 ALILFSACYAFIIYLIFSSAFERAKTHKQYDMILILGAGIFNETVTPML--------ASR 169
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + +Y K S +C I++SGG ++E++ N L++ GV I +E+QS
Sbjct: 170 LDRALEIY---KVQSHNCNILVSGGQGPDEPISEALAMKNYLIKCGVSSSSILMESQSSS 226
Query: 157 TFQNAQFSSSMIKNMQGKNIIL--VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T++N +S S I + V+S +H+ R+ + Q I S + Y +
Sbjct: 227 TYENFLYSKSFINTSFENVPSILCVTSQFHILRALRFAQKLNIKIIGLGS---STPYHFL 283
Query: 215 PLSANFYLTELALKEYIGILIAY 237
+ L++++ ++ Y
Sbjct: 284 DKA--------LLRDFLALIYQY 298
>gi|256618946|ref|ZP_05475792.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256965248|ref|ZP_05569419.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256598473|gb|EEU17649.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256955744|gb|EEU72376.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
Length = 359
Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P + + I
Sbjct: 129 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------RYTQDYI 179
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 180 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 232
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 233 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 292
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 293 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 333
>gi|291439794|ref|ZP_06579184.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291342689|gb|EFE69645.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 233
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 59/195 (30%), Gaps = 24/195 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R++ + + + + L + + V+ G G
Sbjct: 18 RRRLTQAVMAACVLALLPATWLHLAADGRL--------RTTADVPRTEVAVVFGAGLW-- 67
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
EPS R+ + LY++ + +++ GD + E L
Sbjct: 68 ------DGEPSPYLARRLDAAVELYRAGRIE-----VVLVTGDNSREEYDEPDAMRAYLT 116
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + DT+ + + + +L+S +H++R+ G+++
Sbjct: 117 RHGVPDARIVSDYAGFDTWDSCVRAKKVFG---VDRAVLISQGFHIRRAVALCGAAGVSS 173
Query: 200 KASCSDYLNAYYSII 214
D +
Sbjct: 174 YGVGVDDRHDLVWYY 188
>gi|229017592|ref|ZP_04174486.1| hypothetical protein bcere0030_21400 [Bacillus cereus AH1273]
gi|229023809|ref|ZP_04180294.1| hypothetical protein bcere0029_21380 [Bacillus cereus AH1272]
gi|228737494|gb|EEL88004.1| hypothetical protein bcere0029_21380 [Bacillus cereus AH1272]
gi|228743661|gb|EEL93767.1| hypothetical protein bcere0030_21400 [Bacillus cereus AH1273]
Length = 166
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 19 YVLILGAKLFGD--------RPSLSLQNRLDVALEYLYSHPE----VKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E +S +T++N +FS + ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDESRILMEDRSTNTYENLKFSMDLFDVKH---AVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 124 TKIIARRLGMKMEALAAETPMRSKR-----------KMYVREYAAIMK 160
>gi|257455873|ref|ZP_05621092.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257446721|gb|EEV21745.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 225
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 83/232 (35%), Gaps = 24/232 (10%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWG-IIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+++Y I++I + + + + + + ++ + Y+ P +
Sbjct: 7 LINYLERFFSIIKRILTVVVLVGCLITLSFFTPLFSTIVLFILDCYRLPESAVSVNP-AT 65
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T I + + SR+ + ++Y+ II+SG
Sbjct: 66 AIVVLGGGLTNNQ---QNEIVINQFTESRLIKASQVYQQ-----TGLPIIVSG------- 110
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L + G I ++F Q + + + K +ILV+ AYH+ R
Sbjct: 111 -KEAPWMAKWLQKKG-----IMWVLAEKNSFNTCQNAKYTAEMVNVKQVILVTDAYHMNR 164
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S+ F + T S + L N + AL E + +
Sbjct: 165 SRRQFAINDVATIPSIAP-LPKANDWQHFDQNLQHSRRALYELLAFARDLVK 215
>gi|255068057|ref|ZP_05319912.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
gi|255047655|gb|EET43119.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
Length = 214
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 16/193 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L +++ + L + GI + Y + ++
Sbjct: 1 MISLFRSRNGLRYYLFRGIGLSILLVLGIFGEGAWQV----YHTGSQPLPGHVRADAALV 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG PS RI + LY+S + I+ +GG P+K + E+
Sbjct: 57 LGAAAWDK--------RPSPIFRERINHAITLYQSHRVE----KIVFTGGTPKKGYMTEA 104
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L+ G+ +I E S +T++N + +++ +II+VS YHL R+
Sbjct: 105 EVGRRYALKQGIPAHNILFENTSRNTYENIRNIRPILRAEGIGSIIIVSDPYHLARALEI 164
Query: 192 FQHFGINTKASCS 204
I S +
Sbjct: 165 ASDLDIEAYISAT 177
>gi|229515567|ref|ZP_04405026.1| SanA protein [Vibrio cholerae TMA 21]
gi|229347336|gb|EEO12296.1| SanA protein [Vibrio cholerae TMA 21]
Length = 254
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 71/233 (30%), Gaps = 30/233 (12%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ +F +++ L + + + G G++ Q + Q
Sbjct: 13 AVVFSALAHLRRLPWRRLSQTLLWLAIGV----GTGLLAIDRWVTWQTQ-NNIINDAQNT 67
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ V+LG I T+ RI + LY+ K + + GD
Sbjct: 68 PPFQVAVVLGTSKYIGKTLNEYYTN-------RINAAIALYQQGKVRNFLLS-----GDN 115
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E LL +G+ ++I L+ T + + + +++ +
Sbjct: 116 AHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRF 172
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
H +R+ ++ I +++ ++ L+E A
Sbjct: 173 HCERALFIARYQDIQASCLAVPGPSSHSGF----------KVRLREVFARAYA 215
>gi|327331177|gb|EGE72917.1| hypothetical protein HMPREF9344_01832 [Propionibacterium acnes
HL097PA1]
Length = 349
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 92/246 (37%), Gaps = 38/246 (15%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
L++ W L +S+ F + + + G + L +L + P
Sbjct: 104 LLVLMAWCL--RSVFSPFEPWAVAGISATMALGWLSFGFLGYLASVFVIHRAKP--LPGN 159
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG+ + SR+ + +++ + H II SGG
Sbjct: 160 HQIVVLGSALVKGKVPKLL--------ASRLDRGIGQWRTDRDAGFHSVIIPSGGKGDDE 211
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---------------KNM 171
AE L+E G+ R+ + +E Q+ +T +N S ++ +
Sbjct: 212 PRAEGEAMAEYLVEHGIPRECVVVENQAANTDENISLSRQVMPTQVRSVPSRRAEAARER 271
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
Q +++ +S+YH R+ + G+ + + +A ++L L+EYI
Sbjct: 272 QNPQVVVATSSYHAVRAAELCRRQGLRVRVLGA-----------PTATYFLPSAMLREYI 320
Query: 232 GILIAY 237
+L +
Sbjct: 321 ALLASR 326
>gi|239931421|ref|ZP_04688374.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 208
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 54/172 (31%), Gaps = 26/172 (15%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ V+ G G EPS R+ + LY++ + +++
Sbjct: 26 ADVPRTEVAVVFGAGLW--------DGEPSPYLARRLDAAVELYRAGRIE-----VVLVT 72
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD + E L GV I + DT+ + + + +L+S
Sbjct: 73 GDNSREEYDEPDAMRAYLTRHGVPDARIVSDYAGFDTWDSCVRAKKVFG---VDRAVLIS 129
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+H++R+ G+++ D + ++E +
Sbjct: 130 QGFHIRRAVALCGAAGVSSYGVGVDDRHDLVWY----------YGGVREILA 171
>gi|262281176|ref|ZP_06058958.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257407|gb|EEY76143.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 261
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 86/245 (35%), Gaps = 30/245 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLK--HLQFSYQRPLL 58
++ + + L + + FF + GW + L+ + +
Sbjct: 36 IIPLILGAFFCLYSLFYYHLERFFFYHYRLHTLWRFGWLCLWIWLISLGYFFDFIKENKE 95
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ Q N I++LG+G +PS R+ + Q +++
Sbjct: 96 TSQNLPPVNAIIVLGSGVENG--------QPSKTLAKRLDTAAPIALKQLQ----AKVVV 143
Query: 119 SGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GK 174
+GG +E++V + L + + ++ + LE +S T N + S ++ +
Sbjct: 144 TGGLDFSEKESEALVMSRYLEQHYHLAKERMILEDKSTSTELNLKNSKPLLAQHHITLDQ 203
Query: 175 NIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I +V+S +H R+ + G ++ PL+ + L+EY
Sbjct: 204 PIAIVTSDFHTPRAAAIAKKQGYTQVYTVAAE--------TPLATRYNSW---LREYFAF 252
Query: 234 LIAYY 238
++
Sbjct: 253 ASGWF 257
>gi|260584774|ref|ZP_05852519.1| membrane protein [Granulicatella elegans ATCC 700633]
gi|260157431|gb|EEW92502.1| membrane protein [Granulicatella elegans ATCC 700633]
Length = 342
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/241 (16%), Positives = 92/241 (38%), Gaps = 33/241 (13%)
Query: 1 MLLSWIFLIVSYWH----LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
+LL ++F+ + + + + G+ + ++ Y
Sbjct: 103 ILLFFVFMWIRVGLVTNDFFFYNPWIDILFMFIIYSYIIFGFAFVGFMM-------YSFV 155
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L K+ + I++ G G + RI + ++ ++ K +
Sbjct: 156 YLWVPKKQHYDFIIIHGAGLLDGE-------RVTPLLKKRIDKAVQAFQQSKNPH--IQL 206
Query: 117 IISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGK 174
I SGG ++E+ N L+E V ++ I LE +S T++N FS + + + +
Sbjct: 207 IASGGQGSDEKISEAQAMYNYLVEQTDVPKEAILLEDKSTTTYENLLFSKELGEQLVENP 266
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ V++ YH+ R+ Y + G+ +A++Y+ ++EY+ +
Sbjct: 267 RFLFVTNDYHVFRTSTYARQIGMQGDGLGC-----------STASYYIPSAFIREYVAMC 315
Query: 235 I 235
+
Sbjct: 316 V 316
>gi|50842156|ref|YP_055383.1| hypothetical protein PPA0669 [Propionibacterium acnes KPA171202]
gi|289426845|ref|ZP_06428571.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|295130244|ref|YP_003580907.1| hypothetical protein HMPREF0675_3738 [Propionibacterium acnes
SK137]
gi|50839758|gb|AAT82425.1| hypothetical protein PPA0669 [Propionibacterium acnes KPA171202]
gi|289159934|gb|EFD08112.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|291375530|gb|ADD99384.1| conserved hypothetical protein [Propionibacterium acnes SK137]
gi|313763888|gb|EFS35252.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
gi|313771407|gb|EFS37373.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
gi|313808239|gb|EFS46713.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
gi|313811298|gb|EFS49012.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
gi|313814824|gb|EFS52538.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
gi|313819005|gb|EFS56719.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
gi|313820836|gb|EFS58550.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
gi|313822403|gb|EFS60117.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
gi|313825802|gb|EFS63516.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
gi|313828147|gb|EFS65861.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
gi|313830950|gb|EFS68664.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
gi|313833376|gb|EFS71090.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
gi|314915093|gb|EFS78924.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
gi|314918753|gb|EFS82584.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
gi|314920554|gb|EFS84385.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
gi|314925593|gb|EFS89424.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
gi|314932228|gb|EFS96059.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
gi|314954656|gb|EFS99062.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
gi|314958523|gb|EFT02625.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
gi|314959880|gb|EFT03982.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
gi|314968297|gb|EFT12396.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
gi|314973834|gb|EFT17930.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
gi|314976488|gb|EFT20583.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
gi|314979234|gb|EFT23328.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
gi|314983400|gb|EFT27492.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
gi|314986818|gb|EFT30910.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
gi|314989379|gb|EFT33470.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
gi|315080102|gb|EFT52078.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
gi|315083984|gb|EFT55960.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
gi|315085185|gb|EFT57161.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
gi|315089022|gb|EFT60998.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
gi|315096455|gb|EFT68431.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
gi|315099022|gb|EFT70998.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
gi|315100897|gb|EFT72873.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
gi|315107172|gb|EFT79148.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
gi|315108116|gb|EFT80092.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
gi|327326860|gb|EGE68643.1| hypothetical protein HMPREF9338_01734 [Propionibacterium acnes
HL096PA2]
gi|327442936|gb|EGE89590.1| hypothetical protein HMPREF9570_02441 [Propionibacterium acnes
HL043PA1]
gi|327445060|gb|EGE91714.1| hypothetical protein HMPREF9571_02045 [Propionibacterium acnes
HL043PA2]
gi|327447433|gb|EGE94087.1| hypothetical protein HMPREF9568_00729 [Propionibacterium acnes
HL013PA2]
gi|327450039|gb|EGE96693.1| hypothetical protein HMPREF9581_02486 [Propionibacterium acnes
HL087PA3]
gi|327455410|gb|EGF02065.1| hypothetical protein HMPREF9586_01447 [Propionibacterium acnes
HL083PA2]
gi|328752707|gb|EGF66323.1| hypothetical protein HMPREF9579_02249 [Propionibacterium acnes
HL087PA1]
gi|328752927|gb|EGF66543.1| hypothetical protein HMPREF9563_02180 [Propionibacterium acnes
HL020PA1]
gi|328759376|gb|EGF72992.1| hypothetical protein HMPREF9588_00221 [Propionibacterium acnes
HL025PA2]
gi|328760301|gb|EGF73872.1| hypothetical protein HMPREF9343_01965 [Propionibacterium acnes
HL099PA1]
gi|332675082|gb|AEE71898.1| hypothetical protein PAZ_c07120 [Propionibacterium acnes 266]
Length = 349
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 92/246 (37%), Gaps = 38/246 (15%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
L++ W L +S+ F + + + G + L +L + P
Sbjct: 104 LLVLMAWCL--RSVFSPFEPWAVAGISATMALGWLSFGFLGYLASVFVIHRAKP--LPGN 159
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG+ + SR+ + +++ + H II SGG
Sbjct: 160 HQIVVLGSALVKGKVPKLL--------ASRLDRGIGQWRTDRDAGFHSVIIPSGGKGDDE 211
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---------------KNM 171
AE L+E G+ R+ + +E Q+ +T +N S ++ +
Sbjct: 212 PRAEGEAMAEYLVEHGIPRECVVVENQAANTDENISLSRQVMPTQVRSVPSRRAEAARQR 271
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
Q +++ +S+YH R+ + G+ + + +A ++L L+EYI
Sbjct: 272 QNPQVVVATSSYHAVRAAELCRRQGLRVRVLGA-----------PTATYFLPSAMLREYI 320
Query: 232 GILIAY 237
+L +
Sbjct: 321 ALLASR 326
>gi|312793878|ref|YP_004026801.1| hypothetical protein Calkr_1698 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181018|gb|ADQ41188.1| protein of unknown function DUF218 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 195
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 71/217 (32%), Gaps = 26/217 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ KI + ++ F + K + I++LG
Sbjct: 2 RKFLKISICTLATVILIFAVT------------EASIIIFGISSKPKKSDCIIVLGCAVY 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS R+ LYK II+ G ++E+
Sbjct: 50 GD--------FPSPFFRERLNRAFELYKKGYARY----IIVCGAKGPGENISEAEAGKRY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+E GV + I E +S T++N +S ++ K+ I+VS+ +HL+R+ L + +
Sbjct: 98 LVERGVLPELILKEDKSFSTYENLLYSKKIMNKKGFKSTIIVSNMFHLRRASLIAKKLKM 157
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
N S + + E + L
Sbjct: 158 NASFSGVYVKQYLHEEY--YGFVRESVAMWYEILKTL 192
>gi|255327628|ref|ZP_05368694.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
gi|255295302|gb|EET74653.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
Length = 387
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 93/236 (39%), Gaps = 28/236 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + I LIV + + + + F F ++ + + F+ L
Sbjct: 137 LAAGIALIVGPFFVPGPAENTPLGGVWGTIYFYF--SLVLTYFTIYAVGFTVSAVLNLVN 194
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+++ + +V+LG+G P + RI + +Y+ +I+SGG
Sbjct: 195 FRQQADYVVVLGSGLIGDQVTPLL--------AGRIDRGIEIYRKNP----GSKLIMSGG 242
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNIIL 178
+ E + + G+ DI +E ++++T +N FS +++ + + +
Sbjct: 243 QGADEEVPEGVAMTRYAVSRGIPETDIIVEDRAVNTRENLLFSYALMPEVAEGKTPKVAV 302
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++YHL R+ L + G+ + + + ++ ++E+IG L
Sbjct: 303 ATTSYHLFRALLLARSLGLKCWGAGA-----------RTKVYFAVNAFIREFIGYL 347
>gi|325266352|ref|ZP_08133030.1| membrane protein SanA [Kingella denitrificans ATCC 33394]
gi|324982145|gb|EGC17779.1| membrane protein SanA [Kingella denitrificans ATCC 33394]
Length = 216
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 70/224 (31%), Gaps = 28/224 (12%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ Q + F+ + F +GI + + + +LLG
Sbjct: 1 MKRQRAKYYFWAAAVAGCFLAALYGIRA----YTARVAAPYLSDHTAELPERKAALLLGT 56
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ RI LY++ K II GD +KHG E
Sbjct: 57 SPKLADGRSNTYFHL------RIRAAADLYRAGK-----VRYIIVSGDNRKHGYNEPEAM 105
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ + I + + T + + S+ I+VS +H +R+ +
Sbjct: 106 KAALVAQGIPAEKIVPDYAGIRTLDSVLRARSIFGQDSY---IVVSQKFHNERAVYLARA 162
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
GI+ + + + + ++EY+ +
Sbjct: 163 HGIDAYGYNAADV----------DRYSGFKTEVREYLARVKMLL 196
>gi|328950417|ref|YP_004367752.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
gi|328450741|gb|AEB11642.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
Length = 190
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 15/169 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG PS +R+ + LY+ TI+++G
Sbjct: 18 SAPQMADAIVVLGAA--------QYNGHPSPIFANRLNAALALYRQG----YAPTILVTG 65
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E V L +GV RD + ET+S T++N + + +++ + +V+
Sbjct: 66 GKQPGDRYSEGEVGCRYLEAAGVPRDALICETRSRSTWENLKNARALLGPARVL---IVT 122
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
A HL R+ + Q I+ + LT L E
Sbjct: 123 DAPHLPRAMMLAQRLNIDAGGYPVAGRFPLEYRWREAVLRLLTRFGLTE 171
>gi|300788436|ref|YP_003768727.1| hypothetical protein AMED_6599 [Amycolatopsis mediterranei U32]
gi|299797950|gb|ADJ48325.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 217
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 62/179 (34%), Gaps = 18/179 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++IV+LG PS +R+ + +LY + TI+ +G
Sbjct: 44 NDRTPADVIVVLGAAQYNGK--------PSDIYAARLVKAKQLYDAGIAK----TIVTAG 91
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ L GV + DT ++ + + ++ + +LVS
Sbjct: 92 GKKAEDNFTEARAGQLWLTRRGVPASATLAVGEGSDTLRSLRAVAQQVEARGWRTAVLVS 151
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+H R++ G++ + + +S + ++E +L
Sbjct: 152 DPWHSFRARTMAGDLGLDAWTAPT------HSGPIVQERVTQVRYIVRETGALLYYRLT 204
>gi|209694809|ref|YP_002262737.1| vancomycin resistance protein SanA [Aliivibrio salmonicida LFI1238]
gi|208008760|emb|CAQ78957.1| vancomycin resistance protein SanA [Aliivibrio salmonicida LFI1238]
Length = 225
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 73/229 (31%), Gaps = 32/229 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + L + ++ I +S + + I + + Q
Sbjct: 3 ILFPSKLKKWLKIILLVSGIFVAIVLLMDLYISL-------STQSQLYDDIQALPTQETA 55
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG T IR + RI + L+K K + GD
Sbjct: 56 LVLG-------TSKYIRRTLNPYYQYRIDAAIELFKQNKVSHFLLS-----GDNAHRSYN 103
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E LL++GV ++I L+ T + + + +++ +V+ +H +R+
Sbjct: 104 EPWTMKRDLLKAGVPEENITLDYAGFRTLDSVLRAKDIFD---VESLTIVTQQFHCQRAL 160
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H ++ P + T++ ++E + A
Sbjct: 161 FISNHSDMDAVCLVV----------PSPTGWANTKIRIREVLARTKAML 199
>gi|307707010|ref|ZP_07643807.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307617536|gb|EFN96706.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 339
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 24/237 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++ F ++S+ + + F + I + + Y L
Sbjct: 99 IVILLFFALMSFRLGGRHELFYTNHFLNILFAFIAYSYFIFGFAFVAFIL--YSILYLFI 156
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
KK + I++ G G + RI + + Y K II SG
Sbjct: 157 PKKKHYDFIIIHGAGLLDGEK-------VTPLLKRRIDKAVEAYHKSKNPH--IKIIASG 207
Query: 121 GDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-L 178
G ++E+ N LL+ V +D I LE QS T++N FS + + + K
Sbjct: 208 GQGGDEKISEAQAITNYLLKETDVPQDAIILEDQSRTTYENLLFSKELGEKLVAKPQFLF 267
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
V++ YH+ R+ Y + + +A +Y+ ++EY+ + +
Sbjct: 268 VTNDYHVFRTSTYARKLKMKGDGLGC-----------RTAGYYIPSAFIREYVALCV 313
>gi|315604221|ref|ZP_07879287.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313927|gb|EFU61978.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 330
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 84/236 (35%), Gaps = 26/236 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L + IV+++ L + + + G L Y S
Sbjct: 92 LPLLFACAIVAWFGALPVAHAARLPGVVVGFVLAVTACGA-WFFLSFAAMLLYSWLYRSL 150
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + I++ G G E + R+ L+ + T++ SG
Sbjct: 151 PRRRRYDFIIIHGAGLKGK--------ELTPLLAGRVERACELWNAQ---GRRATLVPSG 199
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNII 177
G + ++E+ L GV I LE +S T++N FS +I
Sbjct: 200 GQGEDEEISEAEAMARHLRALGVPASQIALEDRSTTTWENLSFSRDLIAERSSVPDPRSA 259
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
LV+S YH+ R+ +Y + G+N S +A +Y ++E+I I
Sbjct: 260 LVTSDYHVFRAAMYARAVGLNADGLGS-----------RTARYYFPTAFIREFIAI 304
>gi|326317504|ref|YP_004235176.1| hypothetical protein Acav_2700 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323374340|gb|ADX46609.1| protein of unknown function DUF218 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 272
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 77/234 (32%), Gaps = 26/234 (11%)
Query: 6 IFLIVSYWHLLCQSIR--KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ ++ W + R + ++ M + W + L+ P P
Sbjct: 56 LLVLALRWEQAARWRRGHRGRILAWRMAWCAVGLWLVSVAWFWSWLRDYGVPPAEVP--- 112
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
IV+LG GT + +P +R+ L + Q + + GG
Sbjct: 113 -PVQAIVVLGAGT--------LDGQPRPTLAARLDTAAELARRQPQ----ALVAVCGGID 159
Query: 124 QKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILV 179
+E+ + L E + I E +S T N S +++ +V
Sbjct: 160 LGETESEAAIMARYLRERHGIAPGRIVQERESTSTELNIALSRPLLQARGVGAAAPTAIV 219
Query: 180 SSAYHLKRSQLYFQHFGIN---TKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+S +HL R+ + G+ + + Y + + L+ AL+E
Sbjct: 220 TSDFHLMRATRIARRQGLAGVVPVGAPTPITTRYNAWL-REYFAMLSSWALREI 272
>gi|70725701|ref|YP_252615.1| hypothetical protein SH0700 [Staphylococcus haemolyticus JCSC1435]
gi|68446425|dbj|BAE04009.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 318
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 98/249 (39%), Gaps = 39/249 (15%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP----TILLKH-----------LQ 50
+F + + L + + + F + +++ IP L L
Sbjct: 72 LFSLQKGLNFLSKMTKHLILGVLFTSILAYLSTMPIPIINGGFLWLTMIAISTCYALLLY 131
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
S+ L K ++I++LG G P + R+ + +Y+
Sbjct: 132 MSWSSALGRISTHKQYDLIMVLGAGIFTEKVTPML--------AERLNRALSVYQHQ--- 180
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ C II+SGG ++E++ L++ GV + I +E+QS +TF+N +S +I N
Sbjct: 181 TDKCKIIVSGGQGPDEPISEALAMQRYLIQHGVPQSSIIMESQSTNTFENFYYSKKVIHN 240
Query: 171 MQGKNIIL--VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+ + + V+S +H+ R + + S + +Y ++ ++
Sbjct: 241 LYSNSPNILCVTSQFHILRGMKFAHTNRMKVDGIGS---HTHYHFFDVA--------LVR 289
Query: 229 EYIGILIAY 237
+++ ++ Y
Sbjct: 290 DFLALMYQY 298
>gi|254501304|ref|ZP_05113455.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222437375|gb|EEE44054.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 176
Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 18/178 (10%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ + IVLLG PS RI + + H+ II+ G
Sbjct: 7 PQRPADAIVLLGAAVWTG-------GRPSPTLLRRIE-----HAAALYHAGAAPIIVGCG 54
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
H AE+ V +L+ GV + I+ ET+S +T +NA FS+ +++ + +N ++VS
Sbjct: 55 GLGNHPPAEAEVMKRELIALGVPQSAIRTETRSRNTLENAVFSARILRREKLENTLIVSD 114
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L FQ G + S S PL+ Y L+E + + +
Sbjct: 115 RYHLPRAVLCFQTLGFSATGSG---PGRSVSNTPLNKWLYAC---LRETVAYPLYSVK 166
>gi|326772953|ref|ZP_08232237.1| integral membrane protein [Actinomyces viscosus C505]
gi|326637585|gb|EGE38487.1| integral membrane protein [Actinomyces viscosus C505]
Length = 337
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 81/217 (37%), Gaps = 23/217 (10%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHL-QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ + F + LL L Q + QR + +++V+ G G P +
Sbjct: 111 ALLVAALMFCACAYLGVFLLIFLGQTAVQRIWGGRRAMPHPDVVVVHGAGLIDGKVGPLL 170
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVYNNKLLESGVE 144
SRI + ++ + +++ G ++E+ + + GV
Sbjct: 171 --------GSRIAGGIEAWRDEEGLRPGVPLLVMSGGQGADEPVSEARAMADYAIARGVP 222
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ I LE +S T N ++ ++ ++LV+S++H R+ + G+ +
Sbjct: 223 PERILLEDRSTTTRTNISYTRDLLAERGMVDPQVLLVTSSFHAVRTAILASDMGVPWAVA 282
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +A FY+ L+EY+ +L R
Sbjct: 283 PA-----------RTAWFYIVNAWLREYVAVLTYRRR 308
>gi|302871560|ref|YP_003840196.1| hypothetical protein COB47_0901 [Caldicellulosiruptor obsidiansis
OB47]
gi|302574419|gb|ADL42210.1| protein of unknown function DUF218 [Caldicellulosiruptor
obsidiansis OB47]
Length = 195
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 75/218 (34%), Gaps = 33/218 (15%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +I S +L+F F+ + K + I++LG
Sbjct: 2 RKFSRILLYSMVILIFIFVIT------------EASIIVFGISAKPKKSDCIIVLGCAVY 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS R+ + LYK II+ G ++E+
Sbjct: 50 GN--------FPSPFFRERLNKAFELYKKDYARY----IIVCGAKGAGENISEAEAGKRY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV + I E +S T++N ++ K+ I+VS+ +HL+R+ L + I
Sbjct: 98 LIGKGVLPEFILKEDRSFSTYENLLNVKRIMNRRGFKSAIIVSNMFHLERAYLIAKKLKI 157
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
N S ++ + ++E + +
Sbjct: 158 NASVSGVYVQQ---------YSYEEYKGFIREIMALWY 186
>gi|299822206|ref|ZP_07054092.1| conserved domain protein [Listeria grayi DSM 20601]
gi|299815735|gb|EFI82973.1| conserved domain protein [Listeria grayi DSM 20601]
Length = 348
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 93/233 (39%), Gaps = 29/233 (12%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLL--FSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
I++I+ + ++ +++ ++ + + + + Y + P
Sbjct: 112 IIWVIIQWINIPSFLKIPSSLQVLLLVVPTTAYYFFCVALNFTSLSVIYRYAKKPRQP-- 169
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +++LG+G +P + +RI + + YK+ I+ SGG
Sbjct: 170 ----DFLIVLGSGLIGGNRVPPL-------LAARIDKAIAFYKA--SVGARPQIVFSGGK 216
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSS 181
++E+ + G+ D +E S T++N +FS+ ++ N + I ++
Sbjct: 217 GADETISEAEAMQQYAIAKGIPEQDTLVEKNSRTTYENMRFSAEIMANRKTNYEAIFFTN 276
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
YH+ R+ ++ + G+ + +A ++L L+E+I IL
Sbjct: 277 NYHVLRAGMFARKAGLAINGIGA-----------KTAFYFLPNAFLREWIAIL 318
>gi|213157818|ref|YP_002320616.1| hypothetical protein AB57_3302 [Acinetobacter baumannii AB0057]
gi|213056978|gb|ACJ41880.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
Length = 189
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 26/184 (14%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ Q I++LG+G +PS R+ + S Q +I+
Sbjct: 24 ASQNLPAVKAIIVLGSGVENG--------QPSAILAKRLDTAAPVALSQPQ----AKVIL 71
Query: 119 SGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+GG +E++V + L + + +D + LE +S T N + S +++
Sbjct: 72 TGGLDFSEKESEALVMSRYLEQHFHIAKDRMILEDKSTSTELNLKNSKPLLEQAHINANQ 131
Query: 178 ---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V+S +H R+ + G + L+EY
Sbjct: 132 PIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRY----------NAWLREYFAYA 181
Query: 235 IAYY 238
+
Sbjct: 182 SGWL 185
>gi|332885995|gb|EGK06239.1| hypothetical protein HMPREF9456_00113 [Dysgonomonas mossii DSM
22836]
Length = 217
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 73/219 (33%), Gaps = 27/219 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ ++++F++ L+ + + K S ++LG
Sbjct: 6 KKRLKRMFWVLSTGLILAVLAILFAN---WKIPHDSKGFVYNEVDSIPPQKAALVLGAAK 62
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
I P+ RI LY + K + + GD + E+
Sbjct: 63 N-------IGNRPNLYFTYRIQAAKELYDAGKVQA-----FVVSGDNSRKDYNEADDMRA 110
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E+GV I + L T + + + I+VS +H +R+ Q++G
Sbjct: 111 ALVEAGVPDSIIHCDYAGLRTLDSVVRMNEIFGQDSF---IIVSQEFHNERAVFLAQNYG 167
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + + L+ + Y T+ ++E +
Sbjct: 168 LTAYGYNAKD-------LSLNRSSYRTK--IRELFARVK 197
>gi|52143179|ref|YP_083650.1| hypothetical protein BCZK2058 [Bacillus cereus E33L]
gi|51976648|gb|AAU18198.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 185
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S +I+SGG +
Sbjct: 38 YVLILGAKLFGDK--------PSLSLQNRLDVALEYLLSHP----TAKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDLYDVKH---AVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAAETPMRSKR-----------KMYVREYAAIMK 179
>gi|332525839|ref|ZP_08401980.1| hypothetical protein RBXJA2T_08305 [Rubrivivax benzoatilyticus JA2]
gi|332109390|gb|EGJ10313.1| hypothetical protein RBXJA2T_08305 [Rubrivivax benzoatilyticus JA2]
Length = 267
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 18/236 (7%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP---LLSPQWKKDGNII 69
+L + ++ +L + L+ L + G I
Sbjct: 35 AWMLRRRALGWLPLAAGVLALWAVCTPAGSHWLVARLTQPPAALGADEVRALRDAPGTAI 94
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG G S R+ + L + + G + G +
Sbjct: 95 VVLGAGIYPEAPEY-GAAVLKPLSAQRLRYGVWLARR---TGLPLAFSGGRGHHARSGPS 150
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL---- 185
E+ V L E ET+S DT +NA S +++ I+LV++ +H+
Sbjct: 151 EAEVAAATLAEDHGMVLR-WAETRSRDTHENAVHSVALLHEAGITRIVLVTNGFHMRRAL 209
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGILI 235
+ G+ + + ++P + L+ +A+ E++G L
Sbjct: 210 AAFERAAARQGVPMQLVAAPTGTRPERPLEGGDLLPDPEAYRLSWIAMHEWLGRLA 265
>gi|71065507|ref|YP_264234.1| hypothetical protein Psyc_0947 [Psychrobacter arcticus 273-4]
gi|71038492|gb|AAZ18800.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 265
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 83/226 (36%), Gaps = 24/226 (10%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIG--WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L + I F + ++ I + ++ L + ++LG
Sbjct: 33 LFRIINATFMLGATTVILVLISLFTPLFSQAVVYILTHLPLPKMPPAAMSSPPTAYLVLG 92
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G T +I + S +R Y I++SG AE+
Sbjct: 93 GGLTND---NHNQIILNRYSLNRARTAATAYHDLP-----LPIVLSG--------AEAPW 136
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+E G++ + E S++T +NA+F++ + ++ L++ +YH+ R++ F
Sbjct: 137 LGQWLIEHGIDG--LISENASMNTCENARFTAK---RIPLHHVYLITDSYHMARARRQFA 191
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
GIN+ A + L + + N + A+ E L R
Sbjct: 192 LNGINSTAINAP-LPVRRDWMEPAQNLSHSRRAVYEVAAYLRDVIR 236
>gi|255972921|ref|ZP_05423507.1| predicted protein [Enterococcus faecalis T1]
gi|256762373|ref|ZP_05502953.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|255963939|gb|EET96415.1| predicted protein [Enterococcus faecalis T1]
gi|256683624|gb|EEU23319.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|315030014|gb|EFT41946.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
Length = 366
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P K + I
Sbjct: 136 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------KYTQDYI 186
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 187 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 239
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 240 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 299
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 300 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 340
>gi|171742688|ref|ZP_02918495.1| hypothetical protein BIFDEN_01802 [Bifidobacterium dentium ATCC
27678]
gi|171278302|gb|EDT45963.1| hypothetical protein BIFDEN_01802 [Bifidobacterium dentium ATCC
27678]
Length = 236
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 82/242 (33%), Gaps = 37/242 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQS---IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
++ + +F + L R I + ++ + + +G + ++ +
Sbjct: 28 VVFAVLFEALGGGFLFHWWDAMPRLIRDILVALICIAVVAFGTVEGCIVSKMGAQ----- 82
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
K + +++LG R PS R+ + + + I
Sbjct: 83 ----GKPGLDYVIVLGAQVH--------RARPSRVLKFRLDKAIEYLNDNPKTIC----I 126
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG E+ + L +G+ I E++S T +N S +I + ++
Sbjct: 127 VSGGQGSNEPFPEAQGMADYLKTNGIAESRIVEESKSKTTEENIINSKKLIADEN-ASVG 185
Query: 178 LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++++ +H+ R+ + G+ + + + L ++E+ +
Sbjct: 186 IITNDFHVFRALQIARKNGLDDAQGIAAGSPPD-----------MLVNNMVREFFAEIKF 234
Query: 237 YY 238
Sbjct: 235 LL 236
>gi|167957605|ref|ZP_02544679.1| hypothetical protein cdiviTM7_02994 [candidate division TM7
single-cell isolate TM7c]
Length = 204
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 30/223 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
I+ I + F + IG + P L + S + S K + IV + G
Sbjct: 2 IKAIIAVIVFAFMVLLIGTYLSPDDL-RGCDISLKGKESSNLACKRVDAIVAVSGG---- 56
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ +R E ++LYK+ +I SG K G + + L
Sbjct: 57 ------------DTDARTDEAVKLYKNG----WSNLLIFSGAAADKTGPSNAKAMRKHAL 100
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ-HFGIN 198
+ GV I +E S T +NA+ S ++ + IILV+SAYH +R+ + F+ G N
Sbjct: 101 KKGVPDSAIVIEENSNTTQENARLSRNVFSERKISRIILVTSAYHQRRAGIEFRLAAGGN 160
Query: 199 TK----ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ D + + I + LA+ E I I+ Y
Sbjct: 161 VEVINHPVAQDKQWSNWWWISPNG----WWLAMSEIIKIIATY 199
>gi|255975975|ref|ZP_05426561.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|255968847|gb|EET99469.1| conserved hypothetical protein [Enterococcus faecalis T2]
Length = 366
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P K + I
Sbjct: 136 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------KYTQDYI 186
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 187 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 239
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 240 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 299
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 300 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 340
>gi|21220935|ref|NP_626714.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289771792|ref|ZP_06531170.1| integral membrane protein [Streptomyces lividans TK24]
gi|6759567|emb|CAB69760.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289701991|gb|EFD69420.1| integral membrane protein [Streptomyces lividans TK24]
Length = 228
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 16/188 (8%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+ + ++ + L+ L + + V+ G G EPS
Sbjct: 21 LVRVVVAGCVLALLPSAWLRVVTDDRLRTVADVPRTEVAVVFGAGLW--------DGEPS 72
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ LY++ + +++ GD + E L+ GV I
Sbjct: 73 PYLAHRLDAAAELYRAGR-----IAVVLVTGDNSREEYDEPDAMRAYLVRHGVPDGRIVS 127
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+ DT+ + + + +L+S +H++R+ Q G+ + +
Sbjct: 128 DYAGFDTWDSCVRAKKIFG---VDRAVLISQGFHIRRAVALCQEAGVASYGVGVADEHDV 184
Query: 211 YSIIPLSA 218
+
Sbjct: 185 TWYYGGAR 192
>gi|237727319|ref|ZP_04557800.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434175|gb|EEO44252.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 230
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 86/230 (37%), Gaps = 17/230 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++I + + +L K ++ LLF G + + + Y RPL
Sbjct: 9 PTTYIVIFLLLGVVLKSKRWKRLCLTLSALLFLLFSNGALYQWIAEQWYKEYDRPL---P 65
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC----TII 117
+K ++LG + + R+ E +RLYK + + +II
Sbjct: 66 ERKQYTYGIVLGGYSYWDWKRSRPEF---SEIADRLLEGIRLYKHGRIRKLVLASDGSII 122
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
S G + L + G+ +D+ LET++ +T++NA F+ +I N
Sbjct: 123 ESKDGKGLQG--NAADMKQYLADLGMPLEDVILETRANNTWENATFTLELIGNSMKTEST 180
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS----IIPLSANFYL 222
L++SA H++RS F G+N +D +P
Sbjct: 181 LLITSATHMRRSLWTFHAAGLNPDTYITDTFPEIKGEKTNFLPSWHVLAS 230
>gi|332968539|gb|EGK07600.1| protein of hypothetical function DUF218 [Kingella kingae ATCC
23330]
Length = 207
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 81/216 (37%), Gaps = 26/216 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + + + + + + +Y RP P + + V+LG
Sbjct: 5 RKFGRYWLRGLGLSIALISSLQLWCVWQVY----AYSRPQPLPD---EADAAVVLGAAAW 57
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS RI + LY++ + II +GG P+ E+ V
Sbjct: 58 GNK--------PSPVFRERINHALTLYQTGRVK----KIIFTGGTPKAGFATEAEVARQY 105
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
++ G+ DI ET+S DTFQN + ++K ++I+VS YH+ R+ Q +
Sbjct: 106 AIKQGIADQDIVFETRSKDTFQNLANTRFLMKKHHLNSVIIVSDPYHMARAMNMAQDLQL 165
Query: 198 NTKAS--CSDYLNAYYSIIPLSANFYLTELALKEYI 231
N AS + N + S + + E +
Sbjct: 166 NAYASHTPTSRYNNARFFVEESYSL-----FVYELL 196
>gi|28377368|ref|NP_784260.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28270200|emb|CAD63099.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 340
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 98/238 (41%), Gaps = 28/238 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + ++ + S R + +LL ++ + I +L +
Sbjct: 106 VLVIMLVLSVINLGVWHSRRLWQLLGLALLLTAYFAFSFIAYLL--------ACVMTRLG 157
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ-HSMHCTIIISG 120
+ + +++LG G +P+ R+ + Y+ + + TI++SG
Sbjct: 158 RHRQIDYMIVLGAGLMPN-------GQPTRTLAYRLQAAAKYYRVQRARYHQPITIVVSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILV 179
G +AES L++ GV RD I+ E +S T +N +FS ++I + ++V
Sbjct: 211 GQGPDEVMAESTAMRQYLVDQGVPRDAIQEENRSTSTIENLKFSHALIVRQQPFYRAVIV 270
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+S YH+ R+ ++ + +N + + +P + +EY+ +++ Y
Sbjct: 271 TSGYHVLRANIFARQLHLNLTGIGA---HTPLYYLPFA--------MFREYLALIVMY 317
>gi|325953651|ref|YP_004237311.1| hypothetical protein Weevi_0004 [Weeksella virosa DSM 16922]
gi|323436269|gb|ADX66733.1| protein of unknown function DUF218 [Weeksella virosa DSM 16922]
Length = 225
Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 75/206 (36%), Gaps = 20/206 (9%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K F+ + +F +G L+ Y + D + V+LG T
Sbjct: 19 KTVFILSVVGMFFLVGI----NYLIVLFAKPYVS-SQVNELGDDVRVAVVLG-------T 66
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
EPS R+ ++L+KS K + + G+ ++ L+E V +E
Sbjct: 67 RFNKNGEPSDLLKDRLDAGIQLFKSNKVDYLLLS-----GESLRNKLSEVDVMEKYCVER 121
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + I ++ +LDT+ + + KN I V+ YHL R+ + I+
Sbjct: 122 GVPVEKILVDGAALDTYSTVYRTKYIYG---IKNPIFVTQEYHLSRTLFIGRMLNISCTG 178
Query: 202 SCSDYLNAYYSIIPLSANFYLTELAL 227
+D+ + A+
Sbjct: 179 YPADFHTYTDLYKDRARELVSNVKAI 204
>gi|229044023|ref|ZP_04191712.1| hypothetical protein bcere0027_20620 [Bacillus cereus AH676]
gi|228725304|gb|EEL76572.1| hypothetical protein bcere0027_20620 [Bacillus cereus AH676]
Length = 162
Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 15 YVLILGAKLFGD--------RPSLSLQNRLDVAVEYLFSHPE----AKVIVSGGQGEDED 62
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 63 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYR 119
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 120 TKIIAKRLGMKMEALAAETPIRSKR-----------KMYVREYAAIMK 156
>gi|153801022|ref|ZP_01955608.1| integral membrane protein [Vibrio cholerae MZO-3]
gi|124123492|gb|EAY42235.1| integral membrane protein [Vibrio cholerae MZO-3]
Length = 187
Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 68/179 (37%), Gaps = 10/179 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L I + + + + F L + + + T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFLPVE- 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LGNG I IP E + + R+ E +R+ + + + G
Sbjct: 77 --GTLDYVMVLGNGHVIDDDIP-PTSELTRAALMRLTEGIRISRMYPGSKLILS-----G 128
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++ + + L GV + DI L + DT++ A+ +++ ++ G +
Sbjct: 129 YAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQKTYGARHSAST 187
>gi|34499564|ref|NP_903779.1| hypothetical protein CV_4109 [Chromobacterium violaceum ATCC 12472]
gi|34105415|gb|AAQ61770.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 199
Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 16/177 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++LG PS RI ++LY+S K I+ +G
Sbjct: 36 DEVPGADAALVLGAAAWGNK--------PSPVFRERINHAVKLYQSGKVRW----IVFTG 83
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P+ AE+ V GV + +E QS T+QN + + ++ +LVS
Sbjct: 84 GTPEPGYPAEADVGREFAARQGVPMTAMLVENQSRTTWQNLSNARDLGNQFGIRSYLLVS 143
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
H++R+ L G+ + + ++ + + + F E L Y+G +
Sbjct: 144 DPLHMRRAVLMAGDLGLRAYPAPT--QSSRFRTLASWSRFLARETWL--YVGYRVFR 196
>gi|296130901|ref|YP_003638151.1| protein of unknown function DUF218 [Cellulomonas flavigena DSM
20109]
gi|296022716|gb|ADG75952.1| protein of unknown function DUF218 [Cellulomonas flavigena DSM
20109]
Length = 231
Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 15/148 (10%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ P + +++LG G PS R+ + LY+
Sbjct: 68 VPDPADVSERPTVLVLGAGLRPG-------GVPSPYLQRRLDAAVDLYERGVVER----- 115
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++ GD E LL +GV + I + +DT + + +
Sbjct: 116 VLVSGDRSGPDHDEPGAMRAHLLAAGVPDEAIARDDAGVDTHASCVRA---HEEFDVDAA 172
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCS 204
++V+ YHL+R+ + GI+
Sbjct: 173 VVVTQDYHLRRALFSCRAAGIDAVGIGV 200
>gi|282854897|ref|ZP_06264231.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|282582043|gb|EFB87426.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|314924379|gb|EFS88210.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
gi|314981627|gb|EFT25720.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
gi|315092266|gb|EFT64242.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
gi|315094842|gb|EFT66818.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
gi|327328685|gb|EGE70445.1| putative integral membrane protein [Propionibacterium acnes
HL103PA1]
Length = 206
Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 60/189 (31%), Gaps = 24/189 (12%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+C + +G + L + + ++ ++LG
Sbjct: 3 TCIAAFVALLGPWTLAAALSYG-------KVHDVADTEPRDVAIVLGAQV-------LPS 48
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS R+ LY+S K +I+ GD ++ E V L+ GV
Sbjct: 49 GTPSAYLRGRLDVAADLYRSGKA-----KVILVSGDNRETHYNEPKVMKTYLVSKGVPAA 103
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC--S 204
I + LDT+ + + I+V+ YH R+ + G++ +
Sbjct: 104 RIVEDFAGLDTYDTCVRARRIFG---VDRAIMVTQDYHEIRTVATCRMTGLDAVGVPDRT 160
Query: 205 DYLNAYYSI 213
+ +
Sbjct: 161 QPRDNVWWY 169
>gi|293401028|ref|ZP_06645173.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306054|gb|EFE47298.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 261
Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 88/221 (39%), Gaps = 35/221 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ L +R+I ++ +++ F+G IL + + K+ G ++
Sbjct: 63 IFSYLPIPLRRIVYLCTTIIIILFLGLQ--SCILYQGMHT----------DKQQGEAAII 110
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG +R R+ ++ + +I+SGG Q +E+
Sbjct: 111 LGAQLHGSSISRLLRY--------RLERGIQFAEEYPNTY----LIVSGGKGQAETCSEA 158
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L++ GV I +E S++T +N FS +++ K+ ++++ +H+ R+
Sbjct: 159 SAMKQYLIQHGVAESRILMEDASMNTQENLAFSKVLMEKYHIKSASIITNDFHMFRAGFI 218
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
G++ + S + L+ NFY +E++G
Sbjct: 219 ATSLGLSYHNYPA------RSDLDLAPNFY-----FREFLG 248
>gi|222095875|ref|YP_002529932.1| cytoplasmic protein [Bacillus cereus Q1]
gi|221239933|gb|ACM12643.1| hypothetical Cytosolic Protein [Bacillus cereus Q1]
Length = 185
Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 49 DRPSLSLQNRLDVALEYLYSHPE----VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDES 104
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 105 RILIEDQSTNTYENVKFSIDLYDVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 161
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY+ I+
Sbjct: 162 PIRSKR-----------KMYVREYVAIMK 179
>gi|291459679|ref|ZP_06599069.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417711|gb|EFE91430.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 260
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 86/243 (35%), Gaps = 40/243 (16%)
Query: 3 LSWIFL--IV--SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+S++FL ++ W LLF + W +I T +
Sbjct: 53 VSFLFLEELIRHGIWRRFPLLRGTCLLGIFTGLLFLLVSWCLIGTEFFSRGE-------- 104
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + +V+LG +R+ R+ + I+
Sbjct: 105 -----EKLDYLVVLGAQVRPSGPAAVLRL--------RLDRAFAYLSENPETLC----IV 147
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG Q +E+ + LL G+ + I LE QS +T +N S+ ++ + + + +
Sbjct: 148 SGGKGQNEPCSEAEAMRDYLLRRGISAERILLEDQSKNTRENIANSARLLNPERDR-VGI 206
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+SS +H+ R + + G + S S YL L+E + ++
Sbjct: 207 LSSDFHVYRGKAIAKKAGYREVFAVSA----------RSNRLYLLNNMLRESLALVKDKI 256
Query: 239 RGN 241
GN
Sbjct: 257 AGN 259
>gi|162454961|ref|YP_001617328.1| hypothetical protein sce6679 [Sorangium cellulosum 'So ce 56']
gi|161165543|emb|CAN96848.1| hypothetical protein sce6679 [Sorangium cellulosum 'So ce 56']
Length = 208
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 67/206 (32%), Gaps = 15/206 (7%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
IG + R + S + +V LG S
Sbjct: 16 VIGLMAFAVAAFTPVAAPLDRWMASAPDAGQADAVVALGADVDPD-------GRLPEDSL 68
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R E + LY+ + +++ G +E+ GV + E +
Sbjct: 69 RRAVEAVALYREGRA-----PLVLMLGSRNG-PASEAESRARLAQRLGVPASALLTEPRG 122
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
L T AQ S+ ++ + I+LV+ A+ + R++ F+ G A+ + S I
Sbjct: 123 LTTAVEAQRSAELLLPRGARRILLVTGAHRIARARRLFERAGFEVLAAPVP-EGSPASNI 181
Query: 215 PLSANFYLTELALKEYIGILIAYYRG 240
P L+E ++ RG
Sbjct: 182 P-GERLSAIGRLLQELAARALSRLRG 206
>gi|331700708|ref|YP_004397667.1| hypothetical protein Lbuc_0328 [Lactobacillus buchneri NRRL
B-30929]
gi|329128051|gb|AEB72604.1| protein of unknown function DUF218 [Lactobacillus buchneri NRRL
B-30929]
Length = 355
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 85/221 (38%), Gaps = 32/221 (14%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F++ + W I +++L L F +KD + I++LG+G
Sbjct: 136 FLTLLIGYVLLTVWNTISSMILYRLYF----------PRKDKDYIIVLGSGLIDG----- 180
Query: 85 IRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ +RI + Y+ K H +I SGG L E LE G+
Sbjct: 181 --YKVGRLLGNRIETALSFYRSEIKATGKHPKLIFSGGQGGDELLPEGEAMQKYALEHGI 238
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKN---MQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+ D +E +S++T QN FS +I+ +I VS+ YH+ R+ + +
Sbjct: 239 PKVDTLVEDKSINTEQNLAFSRKIIEKDSGRDDNKVIFVSNNYHILRAGVLARKLKFAAF 298
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + +P + ++E++ L+ R N
Sbjct: 299 GVGA---PTPFYFLPNA--------VIREHLAFLVMNKRAN 328
>gi|289642675|ref|ZP_06474815.1| protein of unknown function DUF218 [Frankia symbiont of Datisca
glomerata]
gi|289507505|gb|EFD28464.1| protein of unknown function DUF218 [Frankia symbiont of Datisca
glomerata]
Length = 205
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 72/208 (34%), Gaps = 20/208 (9%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
L + ++ +++ + ++ +++++LG PS
Sbjct: 3 LLRVVAILVLAGVMISVFAMIQIWVVGRSDDQRRSDVLIVLGA--------SQFNGRPSA 54
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
+R+ + LY++ I+ GG E+ N L+ GV + +
Sbjct: 55 VFAARLDHALALYRAGVA----PRIVTVGGSQVGDVYTEARAAANYLVSRGVPASAVVVV 110
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
+ DT + + + ++ + ++ ++V+ +H RS+ + I+ S +
Sbjct: 111 GEGRDTLGSLRAVARIMAVNRWRSAVVVTDPWHSLRSRTIARDLDIDAVTSPA------- 163
Query: 212 SIIPLSANFYLT-ELALKEYIGILIAYY 238
+ P + T L+E
Sbjct: 164 TTGPTTRGIATTLRYILREGAAYRFYQL 191
>gi|198277059|ref|ZP_03209590.1| hypothetical protein BACPLE_03267 [Bacteroides plebeius DSM 17135]
gi|198269557|gb|EDY93827.1| hypothetical protein BACPLE_03267 [Bacteroides plebeius DSM 17135]
Length = 220
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 73/218 (33%), Gaps = 24/218 (11%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + +KI +S + +F I+ + L + + ++L N
Sbjct: 4 LSKHTKKIILVSVAICIFPLTMILILACHIYVELVSRNHTYAFVSKIPERKIGLLLGTN- 62
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
I + Y+RI T+ LYK+ K I+ GD + +E +
Sbjct: 63 -----PISRYTKRRNPFYYNRINATVDLYKAGKIKK-----ILISGDNRHKSYSEPDLMK 112
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ G+ DI L+ T + + + ++S +H R+
Sbjct: 113 GDLIKQGIPEQDIHLDYAGFRTLDSVVRAVKVFG---LSEFTVISQKFHNARAICLANWQ 169
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
G++ + ++ ++ L+E +
Sbjct: 170 GVDAIGFNAKDISFRKG----------IKVQLRELLAR 197
>gi|315145674|gb|EFT89690.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
gi|315160239|gb|EFU04256.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
Length = 401
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 93/232 (40%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P K + I
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------KYTQDYI 221
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 222 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 274
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 275 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 334
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L+ ++E+I I++ Y
Sbjct: 335 FRAGLFARMAGLKADGIGA-----------KTAFYFLSNAFIREFIAIVVMY 375
>gi|228958546|ref|ZP_04120266.1| hypothetical protein bthur0005_20520 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801173|gb|EEM48070.1| hypothetical protein bthur0005_20520 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 162
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 15 YVLILGAKLFGD--------RPSLSLQNRLDVAVEYLFSHPE----VKVIVSGGQGEDED 62
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 63 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYR 119
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 120 TKIIAKRLGMKMEALAAETPIRSKR-----------KMYVREYAAIMK 156
>gi|114765476|ref|ZP_01444586.1| hypothetical protein 1100011001321_R2601_10319 [Pelagibaca
bermudensis HTCC2601]
gi|114542186|gb|EAU45217.1| hypothetical protein R2601_10319 [Roseovarius sp. HTCC2601]
Length = 156
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 20/171 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG EPS R + L++S + + I+ G H +
Sbjct: 3 VVLGAAVWPG-------GEPSPTLRRRAKRAVALWQSGEVGA-----ILGCGGEGAHAPS 50
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ V E+GV + + E +S T +N +F+ +++ M ++++VS AYHL R+
Sbjct: 51 EAEVICRLAREAGVPEEALFREDRSTTTEENLRFALPVLEEMGAHDVVIVSEAYHLPRAL 110
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
L + G+ + + A L+E + + RG
Sbjct: 111 LVARRLGLRARGAAPGLGGARMG--------AQARAMLREIPAFVWYWLRG 153
>gi|317489297|ref|ZP_07947813.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325832335|ref|ZP_08165334.1| putative membrane protein [Eggerthella sp. HGA1]
gi|316911603|gb|EFV33196.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325486171|gb|EGC88625.1| putative membrane protein [Eggerthella sp. HGA1]
Length = 333
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 26/185 (14%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y ++D + IV+ G G + P + +R+ + + L+++
Sbjct: 145 YSWLYRRLPKRRDYDYIVVHGAGLSGTKPTPLL--------AARLDKAVELWEA---DHR 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNM 171
II SGG ++E+ L+E V D + E +S T +N + S +++
Sbjct: 194 RAVIIASGGQGADEAVSEAEAMRTYLVEERGVPADAVIEEDRSTTTMENLRNSKAIMDAR 253
Query: 172 QG---KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
G +V+S YH+ R+ Y G+ S +A ++ ++
Sbjct: 254 SGAGAYRAAVVTSDYHVFRTAEYAHKIGLAADGVGS-----------RTARYFWPTAFIR 302
Query: 229 EYIGI 233
EY+ +
Sbjct: 303 EYVAV 307
>gi|229029997|ref|ZP_04186062.1| hypothetical protein bcere0028_20790 [Bacillus cereus AH1271]
gi|229079448|ref|ZP_04211988.1| hypothetical protein bcere0023_21020 [Bacillus cereus Rock4-2]
gi|228703818|gb|EEL56264.1| hypothetical protein bcere0023_21020 [Bacillus cereus Rock4-2]
gi|228731258|gb|EEL82175.1| hypothetical protein bcere0028_20790 [Bacillus cereus AH1271]
Length = 162
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 15 YVLILGAKLFGD--------RPSLSLQNRLDVALEYLFSHPE----AKVIVSGGQGEDED 62
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 63 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYR 119
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 120 TKIIAKRLGMKMEALAAETPIRSKR-----------KMYVREYAAIMK 156
>gi|73661853|ref|YP_300634.1| hypothetical protein SSP0544 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494368|dbj|BAE17689.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 323
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 48/233 (20%), Positives = 93/233 (39%), Gaps = 28/233 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
F +V + ++ L S I + + T + + L+ K D
Sbjct: 90 FKLVVFTLACFYISLIPIGINVIFLWISAISFSALFTFICYMM---CSSNFLNLNNKPDF 146
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG G P + SR+ + LY + I+SGG
Sbjct: 147 DVILVLGAGIFTENVTPML--------ASRLDRALTLYVQQP----NAKFIVSGGQGPDE 194
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV--SSAYH 184
++E++ L+ GVE + I LE QS T +N QFS S+I++ +V +S +H
Sbjct: 195 PISEALAMKRYLIHHGVESNHIMLEDQSTSTSENIQFSKSLIESHFECVPKIVCVTSQFH 254
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ R+ + Q F + S + Y ++ +++++ ++ Y
Sbjct: 255 IMRALRFGQKFNLKLTGVGS---HTPYHFFEIA--------LIRDFLALMYQY 296
>gi|228920990|ref|ZP_04084327.1| hypothetical protein bthur0011_20010 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228838684|gb|EEM83988.1| hypothetical protein bthur0011_20010 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 162
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 15 YVLILGAKLFGD--------RPSLSLQNRLDVALEYLFSHPES----KVIVSGGQGEDED 62
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 63 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYR 119
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 120 TKIIAKRLGMKMEALAAETPIRSKR-----------KMYVREYAAIMK 156
>gi|300769627|ref|ZP_07079511.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179587|ref|YP_003923715.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|300492780|gb|EFK27964.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045078|gb|ADN97621.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 340
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 98/238 (41%), Gaps = 28/238 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + ++ + S R + +LL ++ + I +L +
Sbjct: 106 VLVIMLVLSVINLGVWHSRRLWQLLGLALLLTAYFAFSFIAYLL--------ACVMTRLG 157
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ-HSMHCTIIISG 120
+ + +++LG G +P+ R+ + Y+ + + TI++SG
Sbjct: 158 RHRQIDYMIVLGAGLMPN-------GQPTRTLAYRLQTAAKYYRVQRARYHQPITIVVSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILV 179
G +AES L++ GV RD I+ E +S T +N +FS ++I + ++V
Sbjct: 211 GQGPDEVMAESTAMRQYLVDQGVPRDAIQEENRSTSTIENLKFSHALIVRQQPFYRAVIV 270
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+S YH+ R+ ++ + +N + + +P + +EY+ +++ Y
Sbjct: 271 TSGYHVLRANIFARQLHLNLTGIGA---HTPLYYLPFA--------MFREYLALIVMY 317
>gi|75911018|ref|YP_325314.1| hypothetical protein Ava_4822 [Anabaena variabilis ATCC 29413]
gi|75704743|gb|ABA24419.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 215
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 78/221 (35%), Gaps = 31/221 (14%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ ++ L I I + + + ++LG
Sbjct: 20 PKKWLFWILITIISALLFAISSTAISIY-----------SYGNSSYNNKADAAIVLGAAV 68
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
EPS RI + LYK+ II +GG + + AE+IV +
Sbjct: 69 WGE--------EPSPVFRERINHAINLYKNGA----ISKIIFTGGVGEINEPAEAIVGKH 116
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVSSAYHLKRSQLYFQHF 195
GV+ DI ETQS T+QN + + ++ N + +++S HLKR+ L ++
Sbjct: 117 YATARGVKTADIITETQSRTTYQNLKNAIEVVDTNEKFTKFLIISDPLHLKRAVLMARNL 176
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
GI+ S + Y E ++E I
Sbjct: 177 GIDAYPSPT--PTTRYRSFNS-----QMEFLIRETYFYFIY 210
>gi|327184361|gb|AEA32808.1| hypothetical protein LAB52_09530 [Lactobacillus amylovorus GRL
1118]
Length = 367
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 79/237 (33%), Gaps = 28/237 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ IF I+ + + + + ++ L+ L +
Sbjct: 121 IALIFSILVLVGPGRYLPHWLSALFASIPAIALYLGLVLYNFLVNLLLYQ------IYPR 174
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +++LG G + S +RI ++ Q III G
Sbjct: 175 HYKQDYLIVLGAGLLNGD-------QVSKLLAARINRAIQFSNRQYQKGRKRPIIIMSGG 227
Query: 123 P-QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
+ E++ GV D I +E QS +T+QN FS + +
Sbjct: 228 QGPDEKIPEALAMARFAQHRGVPTDQILIEDQSKNTYQNMLFSKRIATQDFDSDKFRATF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 288 FSNNYHIFRAALLAKEVGLKANGVGAF-----------TRFYYLPNAIIREFAGVFV 333
>gi|228908043|ref|ZP_04071891.1| hypothetical protein bthur0013_22050 [Bacillus thuringiensis IBL
200]
gi|228851461|gb|EEM96267.1| hypothetical protein bthur0013_22050 [Bacillus thuringiensis IBL
200]
Length = 162
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 72/168 (42%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 15 YVLILGAKLFGD--------RPSLSLQNRLDVALEYLFSHPE----AKVIVSGGQGEDED 62
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++ ++VS+ YHL R
Sbjct: 63 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVEHAVVVSNTYHLYR 119
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 120 TKIIAKRLGMKMEALAAETPMRSKR-----------KMYVREYAAIMK 156
>gi|81429248|ref|YP_396249.1| hypothetical protein LSA1636 [Lactobacillus sakei subsp. sakei 23K]
gi|78610891|emb|CAI55943.1| Hypothetical protein LCA_1636 [Lactobacillus sakei subsp. sakei
23K]
Length = 277
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/253 (17%), Positives = 90/253 (35%), Gaps = 45/253 (17%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI-----------------------L 45
W ++ + + + L + ++ + L
Sbjct: 15 AYIVWKKESHTLSNMLTLFIGLGLIALFFVPMLANLLHVPEDLRIFIGTISTVFLLYIPL 74
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+L S L + + + + I++LG+G +P + SRI M Y
Sbjct: 75 FFYLYLSSLIIYLFNRPRYNQDYIIVLGSGLIDGQYVPPL-------LASRIERAMTFYH 127
Query: 106 SC-KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
K+ ++ SGG L ES+ ++ G+ + E +S++T QN QFS
Sbjct: 128 RQVKKGRPAPKLVFSGGQGGDEKLPESVAMQRYAIDHGIPVEQTLTEEKSVNTLQNMQFS 187
Query: 165 SSMIKNMQG---KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY 221
+I+ II ++ YH R+ L+ + + + ++ ++
Sbjct: 188 KQIIEADTDKDKPRIIFSTNNYHTFRAGLFAKQAHLKADGIGA-----------KTSKYF 236
Query: 222 LTELALKEYIGIL 234
L ++E+I IL
Sbjct: 237 LPNATIREFIAIL 249
>gi|324326310|gb|ADY21570.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 185
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + S + +I+SGG +
Sbjct: 38 YVLILGAKLFGDK--------PSLSLQNRLDVALEYLYSHPE----VKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENVKFSIDLYDVKH---AVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ + G+ +A ++ ++ ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAAETPIRSKR-----------KMYVREYAAIMK 179
>gi|84391224|ref|ZP_00991555.1| sanA protein [Vibrio splendidus 12B01]
gi|84376513|gb|EAP93391.1| sanA protein [Vibrio splendidus 12B01]
Length = 266
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 68/229 (29%), Gaps = 26/229 (11%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ +LL + F+ L+F +I Q R + + +
Sbjct: 7 IFRSYLLKAYKKLQGFLFGAFLVFLVGSAAVIAIDYWVSWQAE-DRIIYDIDDVPELEVA 65
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + T+ RI + L+ K + GD
Sbjct: 66 VVLGTSKYLGRTLNDYYKH-------RIEAAIELFDREKVDQFLLS-----GDNAHRSYN 113
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E LL++GV + I L+ T + + + +++ +H +R+
Sbjct: 114 EPWTMKRDLLKAGVPDERINLDYAGFRTLDSIVRAKKIFDTDNFL---IITQKFHCERAL 170
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ I+ + + T + L+E A+
Sbjct: 171 FIANSYDIHAQCLAVSGPTHHSG----------TSIRLREVFARTKAFL 209
>gi|330470019|ref|YP_004407762.1| hypothetical protein VAB18032_00390 [Verrucosispora maris
AB-18-032]
gi|328812990|gb|AEB47162.1| hypothetical protein VAB18032_00390 [Verrucosispora maris
AB-18-032]
Length = 242
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 22/212 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R + + LL W + + + P V L GT
Sbjct: 24 RWLRRAVLAGAVGALLLVVASWASVS-WIRSGAEGRMHTAQTVPDTP------VALVLGT 76
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ P P+ +R+ LY + K + I+ GD E
Sbjct: 77 RVQPD-----GTPAPFLTARLEIARELYATGKVQA-----ILVSGDNMNADYNEPEAMQR 126
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E GV D + L+ DT+ + + + + +V+ +HL R+ +H G
Sbjct: 127 WLVEHGVPADKVVLDYAGFDTYDSCARAKRIFG---VERATVVTQQFHLARAVTVCRHLG 183
Query: 197 INTKASC--SDYLNAYYSIIPLSANFYLTELA 226
++ + A I + + + A
Sbjct: 184 VDAIGVGDETAREYARTWRISSTREYGASVKA 215
>gi|262371782|ref|ZP_06065061.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262311807|gb|EEY92892.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 261
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 45/244 (18%), Positives = 78/244 (31%), Gaps = 28/244 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLK--HLQFSYQRPLL 58
+L I L + + FF + W ++ +
Sbjct: 36 VLPFLIGLFFCIYAYFYYHFERFFFYHFRLHSIWRFAWACFWIWIISLGYFFNYLTDNNQ 95
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G +PS R+ L K +I+
Sbjct: 96 KPQSIQPVKAIIVLGTGIENG--------QPSATLAKRLDRAAPLAKVQP----DAKVIV 143
Query: 119 SGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---K 174
SGG +E+I+ + L + + I LE +S T N + S ++ +
Sbjct: 144 SGGIDFGEKDSEAIIMSRYLQQKHQIPATQILLEDKSTSTELNLKNSQPLLSAHHITLQQ 203
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I +V+S +H R+Q + G S PLS + L+EY
Sbjct: 204 PIAIVTSDFHTLRAQAIAKKQGYTQT-------ILLGSTTPLSTRYNAW---LREYFAYA 253
Query: 235 IAYY 238
+
Sbjct: 254 SGWI 257
>gi|126642829|ref|YP_001085813.1| hypothetical protein A1S_2799 [Acinetobacter baumannii ATCC 17978]
Length = 242
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 30/245 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L + + FF + GW L+ L + + +
Sbjct: 17 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFNFIKENK 75
Query: 61 QWKKD---GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
++ I++LG+G EPS R+ + S Q +I
Sbjct: 76 DASQNLPAVKAIIVLGSGVENG--------EPSAILAKRLDTAAPVALSQPQ----AKVI 123
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++GG E++V + L + + +D + LE +S T N + S +++
Sbjct: 124 LTGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTELNLKNSKPLLEQAHISVN 183
Query: 177 I---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+V+S +H R+ + G + L+EY
Sbjct: 184 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRY----------NAWLREYFAY 233
Query: 234 LIAYY 238
+
Sbjct: 234 ASGWL 238
>gi|17229308|ref|NP_485856.1| hypothetical protein all1816 [Nostoc sp. PCC 7120]
gi|17130906|dbj|BAB73515.1| all1816 [Nostoc sp. PCC 7120]
Length = 215
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 31/221 (14%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ ++ L I I S + + ++LG
Sbjct: 20 PKKWLFRILITIISALLFAISSTAISIY-----------SYGSNSYNNKADAAIVLGAAV 68
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
EPS RI + LYK+ II +GG + + LAE+IV N
Sbjct: 69 WGE--------EPSPVFRERINHAINLYKNGA----ISKIIFTGGVGEINELAEAIVGRN 116
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVSSAYHLKRSQLYFQHF 195
+ GV+ D+ ETQS T+QN + + ++ N + +++S HLKR+ L ++
Sbjct: 117 YAIARGVKAADVLTETQSRTTYQNLKNAIEVVGTNEKPTKFLIISDPLHLKRAVLMARNL 176
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
GI+ S + Y E ++E I
Sbjct: 177 GIDAYPSPT--PTTRYRSFNS-----QMEFLIRETYFYFIY 210
>gi|257464563|ref|ZP_05628934.1| SanA protein [Actinobacillus minor 202]
gi|257450223|gb|EEV24266.1| SanA protein [Actinobacillus minor 202]
Length = 237
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 82/240 (34%), Gaps = 35/240 (14%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ L++ W +S K + + +G I +K R D
Sbjct: 15 VLLLIKRWMSCGRSFIKWSVGGFIFFVLTLLGIDFITGYSVK------DRIYTDINKLPD 68
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ V+LG +P + + R+ +L K + ++ GD Q
Sbjct: 69 FHTAVVLGTAKFYSKGVPNLYYQY------RVEAASQLVKEHQIKH-----LLVSGDNQT 117
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E V LL+ GV ++ I+ + T + ++ + K I++S +H
Sbjct: 118 PYYNEPKVMTEDLLKMGVPKNIIQQDFAGYRTLDSVIRANKVFK---LAPFIIISQQFHC 174
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAYYRGNR 242
+R+ + I+ + Y ++ ++E+ IG++ Y N+
Sbjct: 175 ERALFIAKTQNIDAVCLVAKYPEG------------HVKVRIREFFARIGMIWDYIVNNQ 222
>gi|160946740|ref|ZP_02093943.1| hypothetical protein PEPMIC_00699 [Parvimonas micra ATCC 33270]
gi|158447124|gb|EDP24119.1| hypothetical protein PEPMIC_00699 [Parvimonas micra ATCC 33270]
Length = 200
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 85/218 (38%), Gaps = 36/218 (16%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+K+F F+ L + L++ L Y ++ +++LG
Sbjct: 2 KKLFKFIIFLCLCVVV--------LIQSLI--YHSKKNDIDTFEN--YVLVLGAKANNGK 49
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
S +R+ T+ K + ++ GG + L+++ L+E
Sbjct: 50 --------LSKTLINRLDTTVEYLNKHK----NAKAVLCGGKENNNELSQAEYMQRYLIE 97
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ ++ + ET S +T++N +F+ + I+++SS YHL R++L FGI K
Sbjct: 98 KGISKERLIAETNSKNTYENIKFALEKLDKK-PSEIMVISSDYHLFRAKLILYRFGILAK 156
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +++P A +E ++ +
Sbjct: 157 TVPAKTPTG--AVVPSYA---------RETFAVVKTFL 183
>gi|256787907|ref|ZP_05526338.1| integral membrane protein [Streptomyces lividans TK24]
Length = 207
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 50/158 (31%), Gaps = 16/158 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ V+ G G EPS R+ LY++ + +++
Sbjct: 30 ADVPRTEVAVVFGAGLW--------DGEPSPYLAHRLDAAAELYRAGR-----IAVVLVT 76
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD + E L+ GV I + DT+ + + + +L+S
Sbjct: 77 GDNSREEYDEPDAMRAYLVRHGVPDGRIVSDYAGFDTWDSCVRAKKIFG---VDRAVLIS 133
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+H++R+ Q G+ + + +
Sbjct: 134 QGFHIRRAVALCQEAGVASYGVGVADEHDVTWYYGGAR 171
>gi|169349938|ref|ZP_02866876.1| hypothetical protein CLOSPI_00678 [Clostridium spiroforme DSM 1552]
gi|169293506|gb|EDS75639.1| hypothetical protein CLOSPI_00678 [Clostridium spiroforme DSM 1552]
Length = 261
Score = 68.7 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 64/178 (35%), Gaps = 25/178 (14%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + K + +++LG PS R+ T+ Y+ + TI
Sbjct: 99 EANNSYCKQTDFVIVLGAKLNGA--------VPSTSLKYRLDATLEYYQQFPET----TI 146
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGK 174
I+SGG ++E+ L++ G+ + I E +S +N +S ++ +
Sbjct: 147 IVSGGQGNGENISEAKAMKQYLIDKGINNNSIIEENKSTYAKENIIYSKKIMDSLKKEKY 206
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ ++++ +H RS+L + + ++E+ G
Sbjct: 207 TVTIITNNFHCYRSKLLANKSNLTAYTYSAKQQKVLI-----------PHYYIREFFG 253
>gi|213027677|ref|ZP_03342124.1| hypothetical protein Salmonelentericaenterica_37123 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 175
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 69/185 (37%), Gaps = 12/185 (6%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
I + ++ F+S L + + LL+ ++ Y Q +
Sbjct: 1 IIGIGLALLWFSRFQKTGKVFISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQ 56
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G T P A S R+ E +RL+++ +I +GG +
Sbjct: 57 KVEYIVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GARLIFTGGVAK 111
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ + V GV R DI + DT + A I +LV+SA H
Sbjct: 112 TNTVSTAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG---DAPFLLVTSASH 168
Query: 185 LKRSQ 189
L R+
Sbjct: 169 LPRAM 173
>gi|237746467|ref|ZP_04576947.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377818|gb|EEO27909.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 203
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 79/221 (35%), Gaps = 32/221 (14%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ +S+R + + + + F + T+ KK + ++LG
Sbjct: 1 MKKSLRILVIAAFLFVAYIFCSIALFSTV----------------DQKKTADAAIILGAA 44
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS RI + LY++ +I++GG + +E+ V
Sbjct: 45 AWYK--------RPSPVFEERIRHGLWLYENG----YVRKLILTGGKSKNAPYSEAFVAR 92
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L + +DI +E S T +N + ++++ ++VS H+KR+
Sbjct: 93 RYALSHAIPENDILIEEASQTTRENLLNAKAIMQANGLSTALIVSDPIHMKRAMHIAGDI 152
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
G+ +S + Y S+ + T+ IG I
Sbjct: 153 GMTAWSSPTP-STRYASLKAKISFL--TQETWH-MIGYFIY 189
>gi|319788557|ref|YP_004148032.1| hypothetical protein Psesu_2977 [Pseudoxanthomonas suwonensis 11-1]
gi|317467069|gb|ADV28801.1| protein of unknown function DUF218 [Pseudoxanthomonas suwonensis
11-1]
Length = 202
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 13/188 (6%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ IL ++ + + ++I++LG A PS RI
Sbjct: 20 VLAILWLGGVAAWINWVGHRDQAQRADVIIVLGAA--------AYDARPSPVFEERIRHG 71
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+ LY++ ++ +GG AES V + G+ + I +ET S T QN
Sbjct: 72 LNLYRAGYAPV----LLFTGGYGTGARFAESQVAQRYAVRQGIPEEAILIETASRTTLQN 127
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
+ +++ Q + I+VS H+ R+ + GI S + + S
Sbjct: 128 LLQARELMRERQLHSAIIVSDPLHMSRALRLCRQLGIEATGSPTP-STRFRSFQTQWKFL 186
Query: 221 YLTELALK 228
Sbjct: 187 LQEVYFFH 194
>gi|315107767|gb|EFT79743.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
Length = 206
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 59/189 (31%), Gaps = 24/189 (12%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+C + +G + L + + ++ ++LG
Sbjct: 3 TCIAAFVALLGPWTLAAALSYG-------KVHDVADTEPRDVAIVLGAQV-------LPS 48
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS R+ LY+S K +I+ GD ++ E V L+ GV
Sbjct: 49 GTPSAYLRGRLDVAADLYRSGKA-----KVILVSGDNRETHYNEPKVMKTYLVSKGVPAA 103
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC--S 204
I + L T+ + + I+V+ YH R+ + G++ +
Sbjct: 104 RIVEDFAGLGTYDTCVRARRIFG---VDRAIMVTQDYHEIRTVATCRMTGLDAVGVPDRT 160
Query: 205 DYLNAYYSI 213
+ +
Sbjct: 161 QPRDNVWWY 169
>gi|315174445|gb|EFU18462.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 401
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P K + I
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------KYTQDYI 221
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 222 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 274
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 275 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 334
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 335 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 375
>gi|257785029|ref|YP_003180246.1| hypothetical protein Apar_1229 [Atopobium parvulum DSM 20469]
gi|257473536|gb|ACV51655.1| protein of unknown function DUF218 [Atopobium parvulum DSM 20469]
Length = 378
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 87/263 (33%), Gaps = 54/263 (20%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + + + + FML + + + + Y
Sbjct: 119 LILLIASPAIVSYLDPDTHRIVVVLLGLFMLEGLWFSFTFVALLF-------YSWIYRIL 171
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + I++ G G P+ RI + + L+ QH ++SG
Sbjct: 172 PRRRTYDYIIIHGAGLDGP--------RPTPLLAGRINKALELWNKQHQHG---KFVVSG 220
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-------- 172
G ++E+ + LLE V D I +E +S T++N ++S +I N
Sbjct: 221 GQGADEVVSEAQAMRDYLLEKDVPLDAILMEDKSTTTWENLKYSIGIINNDWTASANTTS 280
Query: 173 -----------------GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
+V+S +H+ R Y + G+ S
Sbjct: 281 VDTSASSGSFAASTIGTDFTTAVVTSDFHVFRCAEYAHNLGLKADGIGS----------- 329
Query: 216 LSANFYLTELALKEYIGILIAYY 238
+ +Y ++E+I I A+
Sbjct: 330 HTKGWYWPTAFIREFIAITKAHL 352
>gi|206973669|ref|ZP_03234587.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217959789|ref|YP_002338341.1| hypothetical protein BCAH187_A2388 [Bacillus cereus AH187]
gi|206747825|gb|EDZ59214.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217068109|gb|ACJ82359.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 185
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 49 DRPSLSLQNRLDVALEYLYSHPE----VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDER 104
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 105 RILIEDQSTNTYENVKFSIDLYDVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 161
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY+ I+
Sbjct: 162 PIRSKR-----------KMYVREYVAIMK 179
>gi|307279173|ref|ZP_07560231.1| hypothetical protein HMPREF9515_01492 [Enterococcus faecalis
TX0860]
gi|306504298|gb|EFM73510.1| hypothetical protein HMPREF9515_01492 [Enterococcus faecalis
TX0860]
Length = 401
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P K + I
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------KYTQDYI 221
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 222 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 274
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 275 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 334
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 335 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 375
>gi|228900868|ref|ZP_04065083.1| hypothetical protein bthur0014_20700 [Bacillus thuringiensis IBL
4222]
gi|228858794|gb|EEN03239.1| hypothetical protein bthur0014_20700 [Bacillus thuringiensis IBL
4222]
Length = 166
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + ++E+ N L+ G++
Sbjct: 30 DRPSLSLQNRLDVALEYLFSHPE----AKVIVSGGQGEDEDISEAHSMRNYLMVHGIDES 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 86 RILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 142
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 143 PIRSKR-----------KMYVREYAAIMK 160
>gi|322389504|ref|ZP_08063055.1| hypothetical protein HMPREF8577_0525 [Streptococcus parasanguinis
ATCC 903]
gi|321143779|gb|EFX39206.1| hypothetical protein HMPREF8577_0525 [Streptococcus parasanguinis
ATCC 903]
Length = 324
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 103/261 (39%), Gaps = 44/261 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFM---------------------LLFSFIGWG 39
++ S IFL+ + ++ +++ + + +L +
Sbjct: 56 IIFSSIFLLFNGRQMMLFEGKRLANLLSLLYGLFIIGALALHFLPYFPGNDILIYLTDFA 115
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ L SY +K+ + I++LG+G P + R+ +
Sbjct: 116 LFYMTFLYLSYVSYGTFCNLFPVRKEPDAIIILGSGLIGDKVPPLL--------AQRLDK 167
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+Y+ + +I+SGG +AE+ L+E GV D I +E +S TF+
Sbjct: 168 GKAIYEQFEGR---PKLIVSGGQGSDELIAEAEAMAGYLMEHGVPEDAILIENRSRTTFE 224
Query: 160 NAQFSSSMIKNMQGKNIIL-VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
N FS +++ +L V++++H R+ ++ + I SI +A
Sbjct: 225 NLTFSKRLLEEEGLGKRVLVVTNSFHALRAGVFMRRLKI-----------PGRSIGSRTA 273
Query: 219 NFYLTELALKEYIGILIAYYR 239
+YL ++E IG++ Y++
Sbjct: 274 FYYLPSAWIRETIGLVSLYWK 294
>gi|227518630|ref|ZP_03948679.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227553161|ref|ZP_03983210.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229545952|ref|ZP_04434677.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|229550144|ref|ZP_04438869.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|293383072|ref|ZP_06628990.1| putative membrane protein [Enterococcus faecalis R712]
gi|293387775|ref|ZP_06632319.1| putative membrane protein [Enterococcus faecalis S613]
gi|294779558|ref|ZP_06744952.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|300860460|ref|ZP_07106547.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307271145|ref|ZP_07552428.1| hypothetical protein HMPREF9498_03231 [Enterococcus faecalis
TX4248]
gi|307288139|ref|ZP_07568149.1| hypothetical protein HMPREF9505_01545 [Enterococcus faecalis
TX0109]
gi|307291350|ref|ZP_07571234.1| hypothetical protein HMPREF9509_01659 [Enterococcus faecalis
TX0411]
gi|312900627|ref|ZP_07759924.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312907338|ref|ZP_07766329.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312909955|ref|ZP_07768803.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|312952369|ref|ZP_07771244.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|227073925|gb|EEI11888.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227177687|gb|EEI58659.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229304730|gb|EEN70726.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|229308915|gb|EEN74902.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|291079737|gb|EFE17101.1| putative membrane protein [Enterococcus faecalis R712]
gi|291082845|gb|EFE19808.1| putative membrane protein [Enterococcus faecalis S613]
gi|294453348|gb|EFG21756.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|300849499|gb|EFK77249.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306497581|gb|EFM67114.1| hypothetical protein HMPREF9509_01659 [Enterococcus faecalis
TX0411]
gi|306500875|gb|EFM70193.1| hypothetical protein HMPREF9505_01545 [Enterococcus faecalis
TX0109]
gi|306512643|gb|EFM81292.1| hypothetical protein HMPREF9498_03231 [Enterococcus faecalis
TX4248]
gi|310626366|gb|EFQ09649.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310629753|gb|EFQ13036.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|311289913|gb|EFQ68469.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311292108|gb|EFQ70664.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315027393|gb|EFT39325.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315033767|gb|EFT45699.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
gi|315036853|gb|EFT48785.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
gi|315147862|gb|EFT91878.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315150660|gb|EFT94676.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
gi|315153332|gb|EFT97348.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315155890|gb|EFT99906.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
gi|315157942|gb|EFU01959.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|315164245|gb|EFU08262.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
gi|315166661|gb|EFU10678.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
gi|315170055|gb|EFU14072.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315575579|gb|EFU87770.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315579979|gb|EFU92170.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|323480601|gb|ADX80040.1| conserved hypothetical protein [Enterococcus faecalis 62]
gi|327535007|gb|AEA93841.1| integral membrane protein [Enterococcus faecalis OG1RF]
Length = 401
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P K + I
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------KYTQDYI 221
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 222 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 274
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 275 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 334
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 335 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 375
>gi|293607329|ref|ZP_06689669.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292814279|gb|EFF73420.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 184
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 62/175 (35%), Gaps = 22/175 (12%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
++ ++LG +PS + +R+ Y + M C ++ G
Sbjct: 30 PADVAIVLG-------NTVLPTGQPSPRLAARLDRAYDCYAA-----MQCRLVFVSGGVD 77
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
G E+ V + L+ GV + I ++ +++ A+ +S+ ++ ++V+ +H
Sbjct: 78 PAGADEAAVMRDYLIARGVPAERIVTDSAGDNSWATARHASAYMREHGYTRALVVTQYFH 137
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ R+ L + G+ P + +E + R
Sbjct: 138 VPRTVLALRRHGV----------ADVSGGYPQFFEWRDLYSIFRELPAVAWYSLR 182
>gi|253583190|ref|ZP_04860388.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251833762|gb|EES62325.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 254
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 81/223 (36%), Gaps = 38/223 (17%)
Query: 15 LLCQSIRKIFFMS--CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ ++KI + F+L F F+ I+ IL+ +++L
Sbjct: 61 RFFKFLKKICKLGYYFFILTFIFVEVIILKDILVNR------------NKDPKVKCLIVL 108
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G ++ R+ + + YK + I+SGG + ++E+
Sbjct: 109 GAGLKGDVPSEVLKY--------RLDKAVEYYKENP----NTIFIVSGGQGKDELISEAE 156
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAYHLKRSQLY 191
L + + +I E +S T++N +FS +IK I V S+++H+ R ++
Sbjct: 157 AMEIYLSKRDIPIKNIIKEDKSTSTYENLKFSDEIIKQKGITGDIAVMSNSFHMYRVKII 216
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ K ++ L+EY +L
Sbjct: 217 SEKLNFPLKTVYAETP-----------AIVFPNYMLREYFALL 248
>gi|119962310|ref|YP_949744.1| hypothetical protein AAur_4076 [Arthrobacter aurescens TC1]
gi|119949169|gb|ABM08080.1| putative integral membrane protein with DUF218 domain [Arthrobacter
aurescens TC1]
Length = 336
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 87/238 (36%), Gaps = 31/238 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FL L S + + + F + + L Y ++ +
Sbjct: 102 VFLAPVIAFLFVLSGQPVLAGIAALAFFL---CSYLGCAFVVFLG--YAVVYSKMRFSPN 156
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+++LG+G P + +R+ + + +Y + SGG
Sbjct: 157 PAAVIVLGSGLIDGKVPPLL--------AARLNKALEIYDGGTPAKPVL--VPSGGQGPD 206
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAYH 184
ES + L+ G D+ E Q+ T +N +S +++ + + +LV ++ YH
Sbjct: 207 EPRPESTAMKDYLVAKGAAAKDVLEENQATTTRENLAYSVALLADKGIQGPLLVCTNNYH 266
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ R+ L + IN + + +A +++ L+E++ + R NR
Sbjct: 267 VLRAALLSRRQKINAEVVGA-----------PTARYFVPSAFLREFVAV----MRDNR 309
>gi|289550052|ref|YP_003470956.1| membrane protein [Staphylococcus lugdunensis HKU09-01]
gi|289179584|gb|ADC86829.1| membrane protein [Staphylococcus lugdunensis HKU09-01]
Length = 317
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
F LF + I T+ L + + I++LG G P +
Sbjct: 109 VFTGLFIWFSLIAISTLTTFALYLCFSSAFGRMTNHCTFDGIIVLGAGIFTEAVTPLL-- 166
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
SR+ + +Y HCTII+SGG + ++E++ LL GV
Sbjct: 167 ------ASRLNRALSIYNQQ----SHCTIIVSGGQGKDEPISEALAMKRYLLSHGVPEQS 216
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIIL--VSSAYHLKRSQLYFQHFGINTKASCS 204
I +E S +T +N +S S+I M K L V+S +H+ R+ + Q FG+ + S
Sbjct: 217 IIMEAHSTNTAENFLYSKSIIDAMTPKPNKLLVVTSQFHILRALRFAQKFGLPVQGIGS 275
>gi|322385255|ref|ZP_08058902.1| hypothetical protein HMPREF9422_0267 [Streptococcus cristatus ATCC
51100]
gi|321270879|gb|EFX53792.1| hypothetical protein HMPREF9422_0267 [Streptococcus cristatus ATCC
51100]
Length = 337
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 94/238 (39%), Gaps = 31/238 (13%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ ++ H L +S LL + + + I+ + K
Sbjct: 105 GLAIVGLALLHFLAPRSFLAILISFADLLLFYGTFLYLSYIIYAFFLNIFPV-------K 157
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K+ I++LG G P + R+ + + +Y+ + II+SGG
Sbjct: 158 KEPQTIIILGAGLFGDKVPPLL--------AQRLDKGIAIYEK---FNRKPVIIVSGGQG 206
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSS 181
++E+ L+E GV D I LE +S T +N FS ++ + + LV++
Sbjct: 207 DDEWISEAEAMAGYLMEKGVPADSIFLENKSRTTLENLIFSKELMLSQGLEQDRVLLVTN 266
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++H R+ +Y + G+ SI +A ++L ++E G++ Y++
Sbjct: 267 SFHALRAGIYMRQVGLK-----------GRSIGSRTAFYFLPSAWIRETAGLIRIYWK 313
>gi|310642426|ref|YP_003947184.1| protein [Paenibacillus polymyxa SC2]
gi|309247376|gb|ADO56943.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
Length = 231
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 17/174 (9%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+++F +G+ + S + I ++LG
Sbjct: 34 FILGLMIFILVGFVWAGIRVWNM------NTAASTNPLQHAQIGIVLGASMWGA------ 81
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
EPS R+ E + LY++ + I+ G D E+ L++ GV
Sbjct: 82 --EPSPGLKERLEEALWLYRNGTVQRL---IVSGGLDQPDFPYTEAEGMQRYLVDRGVPV 136
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
I LE Q+ T++N +S ++K + ++++ +YH R+ Q +
Sbjct: 137 QHILLENQATSTYENLLYSQRIMKEYDWNSTVIITHSYHGPRAMEIAQFLNFDH 190
>gi|238020831|ref|ZP_04601257.1| hypothetical protein GCWU000324_00721 [Kingella oralis ATCC 51147]
gi|237867811|gb|EEP68817.1| hypothetical protein GCWU000324_00721 [Kingella oralis ATCC 51147]
Length = 212
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 66/214 (30%), Gaps = 25/214 (11%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ L ++ + + + +LLG +
Sbjct: 5 LILAIALFALLTAITLLANWHTQR--QTAPYLYTHAEQIPAQKAALLLGT------SPLL 56
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ RI LY++ K II+ GD +KHG E L+ GV
Sbjct: 57 ANGRSNLYFTHRIRAAAELYRAGK-----VRYIIASGDNRKHGYNEPEAMKAALIAQGVP 111
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I + + T + + S+ + I+VS +H +R+ + GI +
Sbjct: 112 AERIVPDYAGIRTLDSVLRARSVFGQ---ADYIVVSQKFHNERAVYLARAHGIRAVGYNA 168
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ + ++EY + Y
Sbjct: 169 PDVH---------LYAGGFKTRVREYGARMKMYL 193
>gi|226330690|ref|ZP_03806208.1| hypothetical protein PROPEN_04610 [Proteus penneri ATCC 35198]
gi|225201485|gb|EEG83839.1| hypothetical protein PROPEN_04610 [Proteus penneri ATCC 35198]
Length = 240
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 71/186 (38%), Gaps = 10/186 (5%)
Query: 37 GWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
G + LL + YQ R L ++D N IV+LG G T P A S
Sbjct: 41 GIQPVADTLLMPSEKEYQARYELRENSQQDVNYIVVLGGGFTYNPE-WAPSANLLNNSLF 99
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLY + +I G + ++ + V GV + +
Sbjct: 100 RVAEGVRLYYRNPNAT-----LIFTGGAGVNQISSAEVAAQVAQSLGVPANKTIALSTPK 154
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
DT + A +I LV+SA HL R++ +F +N + ++ L + P
Sbjct: 155 DTEEEAYEVDKLIGKQPFL---LVTSANHLARAERFFLARRMNPIVAPANQLAITSPLHP 211
Query: 216 LSANFY 221
F+
Sbjct: 212 WEKYFF 217
>gi|110801440|ref|YP_698578.1| hypothetical protein CPR_1256 [Clostridium perfringens SM101]
gi|110681941|gb|ABG85311.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 257
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 97/245 (39%), Gaps = 37/245 (15%)
Query: 1 MLLSWIFLIVSYW--HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
++L + ++ + + LL K + +L I II + Y + L
Sbjct: 38 LILGVVIILYTLFIDKLLKLQWFKNVYKPMKILALICISIFIIVEGAIIF----YPKKSL 93
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P N IV+LG G + R+ +T+ + + II+
Sbjct: 94 KP-----CNYIVVLGAGIRGE--------NLTATLKDRLDKTIEYLEK---TGFNGEIIV 137
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QG 173
SGG + E+ L+E+GV +D I LE ++ T++N +S +I+N+ +
Sbjct: 138 SGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKD 197
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+I++V++ +H RS L + G + Y + + + + +E+
Sbjct: 198 LDILVVTTDFHAMRSNLLAKRNGYD----------KAYLYTSKTQWYLVPSMYAREFFAF 247
Query: 234 LIAYY 238
+Y+
Sbjct: 248 CKSYF 252
>gi|308179164|ref|YP_003918570.1| hypothetical protein AARI_34120 [Arthrobacter arilaitensis Re117]
gi|307746627|emb|CBT77599.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis
Re117]
Length = 342
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 90/234 (38%), Gaps = 28/234 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ L V L+ + ++ F+ + S + +LL Y
Sbjct: 107 LAVFALPVIAVLLIRIESWWTYALAFFLFMASLFTASLFAMLLL------YAWVHGRFPS 160
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K D +V+LG T P +R R+ + + L QHS ++ +GG
Sbjct: 161 KADSAAVVVLGARTIKGKVTPLLRG--------RLDKGIEL--QQLQHSPRPFMVPTGGQ 210
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVSS 181
E + L E G++ I +E ++ DT +N +FS++ + + + LV+S
Sbjct: 211 GHDEVEPEGVSMAKYLQEQGIDEAQILIEDRAKDTMENLRFSNALIREQRPDGQLWLVTS 270
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
YH R + + G++ +A +A +Y L+E + I+
Sbjct: 271 DYHALRVAMASRQLGLDARAFG-----------GKTAAYYRPSAFLRECVAIVR 313
>gi|262402457|ref|ZP_06079018.1| SanA protein [Vibrio sp. RC586]
gi|262351239|gb|EEZ00372.1| SanA protein [Vibrio sp. RC586]
Length = 207
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 25/187 (13%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ + Q + V+LG I T+ RI + LY+ K
Sbjct: 3 WQTQNNIINDTQNTPPFQVAVVLGTSKYIGKTLNEYYTN-------RIDAAIELYQQGKV 55
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + GD E LL +G+ ++I L+ T + + + +
Sbjct: 56 RNFLLS-----GDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKQIFE 110
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+++ +H +R+ + I P +N ++ L+E
Sbjct: 111 TNNFL---IITQRFHCERALFIAHYQDIQASCLAV----------PGPSNHSGFKVRLRE 157
Query: 230 YIGILIA 236
A
Sbjct: 158 VFARAYA 164
>gi|315104704|gb|EFT76680.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
Length = 206
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 59/189 (31%), Gaps = 24/189 (12%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+C + +G + L + + ++ ++LG
Sbjct: 3 TCIAAFVALLGPWTLAAALSYG-------KVHDVADTEPRDVAIVLGAQV-------LPS 48
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS R+ LY+S K +I+ GD ++ E V L+ GV
Sbjct: 49 GTPSAYLRGRLDVAADLYRSGKA-----KVILVSGDNRETHYNEPKVMKTYLVSKGVPAA 103
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC--S 204
I + L T+ + + I+V+ YH R+ + G++ +
Sbjct: 104 RIVEDFAGLGTYDTCVRARRIFG---VDRAIMVTQDYHEIRTVATCRMTGLDAVGVPGRT 160
Query: 205 DYLNAYYSI 213
+ +
Sbjct: 161 QPRDNVWWY 169
>gi|93007196|ref|YP_581633.1| hypothetical protein Pcryo_2372 [Psychrobacter cryohalolentis K5]
gi|92394874|gb|ABE76149.1| protein of unknown function DUF218 [Psychrobacter cryohalolentis
K5]
Length = 259
Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 83/250 (33%), Gaps = 40/250 (16%)
Query: 2 LLSWIFLIVSYWHLLCQSIR-------KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
L+ +F+ + ++++ + I +GI L Q
Sbjct: 37 LVGMVFVAHGIFWRNIIRFICQNNWLSRLWYGLWMVFFIWLISFGIFVYAL-------QQ 89
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
+ S + I++LG+GT P + R+ L S K
Sbjct: 90 QIKQSAKPIPRVAAIIVLGSGTVAGKPTPTL--------AKRLDTAAPLINSQK----GA 137
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I SGG +E+ + L + + I E QS T +N +S ++
Sbjct: 138 LVITSGGIGFGQTHSEAYIMATYLYDTYDIPLKHILQEGQSTSTAENLIYSQEILAAKGI 197
Query: 174 K---NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
I +V+S +H+ R+ +H G + S PLS + +EY
Sbjct: 198 SIKAPIAIVTSDFHIIRAANIARHQGY-VQP------TMLASPTPLSIRYNAW---FREY 247
Query: 231 IGILIAYYRG 240
+ + G
Sbjct: 248 FAFVSGWLFG 257
>gi|229161985|ref|ZP_04289961.1| hypothetical protein bcere0009_27680 [Bacillus cereus R309803]
gi|228621466|gb|EEK78316.1| hypothetical protein bcere0009_27680 [Bacillus cereus R309803]
Length = 219
Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 70/184 (38%), Gaps = 20/184 (10%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+IF + M+ + + + + + ++LG +
Sbjct: 19 RRIFQVFLLMICSAILYVSYAAYDIWSY--------RFKTNDGVKTDAGIVLGAASWNGK 70
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS RI + LYK+ II +GG + L ES ++
Sbjct: 71 --------PSPVFKERINHAISLYKNG----DIKKIIFTGGTKFEAELEESRTARVYAMK 118
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H I
Sbjct: 119 QGVKDEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHINIEAY 178
Query: 201 ASCS 204
AS +
Sbjct: 179 ASPT 182
>gi|115372876|ref|ZP_01460181.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310818526|ref|YP_003950884.1| hypothetical protein STAUR_1253 [Stigmatella aurantiaca DW4/3-1]
gi|115370143|gb|EAU69073.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309391598|gb|ADO69057.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 210
Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 18/174 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +++V+LG PS +R+ + + LY ++
Sbjct: 42 ERAAPADVLVVLGA-------RVLPGGVPSGALLARVEKAVALYHQGLASR-----LLFS 89
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + +E+ V + GV + LE QS T QNA+FS+ +++ + + +++VS
Sbjct: 90 GGVGVNPPSEAQVMRALAVRLGVPAEACFLEEQSHSTEQNARFSAQVLRALGAERVVVVS 149
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
YHL R++ YF+ G S + + + FY T ++E +L
Sbjct: 150 DPYHLLRARQYFRLEGWEVATSPA---LLTERNLHAADRFYWT---VREAFALL 197
>gi|307277497|ref|ZP_07558589.1| hypothetical protein HMPREF9521_03090 [Enterococcus faecalis
TX2134]
gi|306505762|gb|EFM74940.1| hypothetical protein HMPREF9521_03090 [Enterococcus faecalis
TX2134]
Length = 401
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + I L + + +P K + I
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAF---IFYNFLTVSTLYQFNQP------KYTQDYI 221
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 222 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 274
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 275 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 334
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 335 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 375
>gi|229102877|ref|ZP_04233571.1| hypothetical protein bcere0019_20290 [Bacillus cereus Rock3-28]
gi|228680550|gb|EEL34733.1| hypothetical protein bcere0019_20290 [Bacillus cereus Rock3-28]
Length = 166
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ L+ G++
Sbjct: 30 DRPSLSLQNRLDVALEYLFSHPE----AKVIVSGGQGEDEDIPEAHSMRIYLMVHGIDES 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E +S +T++N +FS + ++VS+ YHL R+++ + GI +A ++
Sbjct: 86 RILMEDRSTNTYENLKFSMDLFDVKH---AVVVSNTYHLYRTKIIARRLGIKMEALAAET 142
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 143 PMRSKR-----------KMYVREYAAIMK 160
>gi|239990469|ref|ZP_04711133.1| hypothetical protein SrosN1_24383 [Streptomyces roseosporus NRRL
11379]
gi|291447482|ref|ZP_06586872.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291350429|gb|EFE77333.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 336
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 93/235 (39%), Gaps = 27/235 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + +V L S F+ +L+ ++ + + + L +
Sbjct: 103 IFAVLALVVTADYLGGSDAYRSFILAVVLITGYVAFLFLCFLAYAFLYGR-------IRV 155
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII-ISGG 121
+ D + +V+LG+G +P + SR+ +R+ + ++ +SGG
Sbjct: 156 RGDVDFVVMLGSGLIGGERVPPL-------LASRLRSGLRIQERQIARGGPAPVLLVSGG 208
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVS 180
L E+ L+ G + D + E +S T +N +FS S+++ +G ++V+
Sbjct: 209 QGPDEKLPEAEAMGRWLVAEGADPDLVLEENRSRTTTENLRFSRSLMEGADEGYVCVVVT 268
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +H R+ + + G+ + S +A ++ ++E++ +
Sbjct: 269 NNFHAFRAAMTARKEGVRGQVIGS-----------PTAAYFWPSATIREFVAVFW 312
>gi|150389466|ref|YP_001319515.1| hypothetical protein Amet_1679 [Alkaliphilus metalliredigens QYMF]
gi|149949328|gb|ABR47856.1| protein of unknown function DUF218 [Alkaliphilus metalliredigens
QYMF]
Length = 196
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 85/229 (37%), Gaps = 37/229 (16%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L + I ++ + ++ + I + + V+
Sbjct: 2 IAGRLIYLNKTIRYILGVLFIWVAVHVLITTF-------------DGLNDKTEIADAAVV 48
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG + PS + R+ + + LY+ + +I G K G E+
Sbjct: 49 LG-------NKVELDGTPSPRLQGRLDKAVELYEKGYFNY-----VIVSGGTGKEGFDEA 96
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+V + L+++ + D + L+ + ++ A+ + ++ +M +++ ++S YH+ R++L
Sbjct: 97 LVMKDYLVKNEIPDDKVILDQEGYNSMMTAKNTKIIMDHMDLESVTVISQFYHITRTKLA 156
Query: 192 FQHFGIN-TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F+ G ++ ++Y + F +E+ G +
Sbjct: 157 FRKVGFEQVYSAHAEYFD-----------FRDIYSIAREFAGYYKYLFM 194
>gi|229178646|ref|ZP_04306010.1| hypothetical protein bcere0005_20040 [Bacillus cereus 172560W]
gi|228604804|gb|EEK62261.1| hypothetical protein bcere0005_20040 [Bacillus cereus 172560W]
Length = 166
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 30 DRPSLSLQNRLDVALEYLFSHPE----AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDES 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 86 RILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 142
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 143 PIRSKR-----------KMYVREYAAIMK 160
>gi|116623760|ref|YP_825916.1| hypothetical protein Acid_4672 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226922|gb|ABJ85631.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 207
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 74/223 (33%), Gaps = 35/223 (15%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ +L + + +L+ L Y P + + I +L GT
Sbjct: 4 WLWTAVALVLGGYILSAPLAGRWMLERLANQY--PEMPVSSCPTADAIAVL-AGTGPPRA 60
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
R EP +R+ + L ++ + ++++ + GL
Sbjct: 61 GEMRRGEP----LNRMEAGITLLRAGRA----PRLVMATDGEEAKGLR------------ 100
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF------ 195
+ D + + DT A+ + +ILV+S +H+ R+ F+
Sbjct: 101 EIPDDRVLQLRPARDTADEARRIVGEARQQSWHRLILVTSGFHMGRALREFRRAAERAGV 160
Query: 196 GINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIG 232
+ +D + A S P + + + AL+E G
Sbjct: 161 ELTVIPFAADPQVYERWPPAAKSWAPSISGWEFSTRALREMFG 203
>gi|261253221|ref|ZP_05945794.1| SanA protein [Vibrio orientalis CIP 102891]
gi|260936612|gb|EEX92601.1| SanA protein [Vibrio orientalis CIP 102891]
Length = 253
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 62/226 (27%), Gaps = 29/226 (12%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q + ++ F L+ + I + Q + ++ V+L
Sbjct: 12 WLNWTQVTKVARWLPVFALILAA-SLFAIDRWVSYQAQKQ---LFTQVEQIDKFDVAVVL 67
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G + + R+ + LY K + GD E
Sbjct: 68 GTSKYLGKILNEYYSH-------RMDAAIELYNEGKVAHFLLS-----GDNAHRSYNEPW 115
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
LL + V + I L+ T + + + ++S +H +R+
Sbjct: 116 TMKRDLLRAEVPEEKIFLDYAGFRTLDSVVRAKEIFDTDNFL---IISQKFHCERALFIA 172
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ IN P + ++ ++E A
Sbjct: 173 KSHNINASCFAV----------PGPSRHSGWKVRVREVFARAKAVL 208
>gi|319893318|ref|YP_004150193.1| Integral membrane protein [Staphylococcus pseudintermedius
HKU10-03]
gi|317163014|gb|ADV06557.1| Integral membrane protein [Staphylococcus pseudintermedius
HKU10-03]
Length = 260
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 97/259 (37%), Gaps = 45/259 (17%)
Query: 1 MLLSWIFLIVSYW------HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
+++ I L ++ + + + +++ S + +IP +L Q Q
Sbjct: 4 LVIGLILLALTLYRHIQTYWHIIGRVITYHLAIVALIIGSLLVIPLIPAVLTIPFQLLVQ 63
Query: 55 R----------------PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
L I++LG G P ++ +R+
Sbjct: 64 LAIVFLTAWQTYLFMTFTFLHHLPPVTRANIIVLGAGIYTEAVTPMLK--------ARLD 115
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ L + ++ II+SGG ++E++ L++ G+ I +E QS +T
Sbjct: 116 RAIALSRQLEKFH----IIVSGGQGPDEPISEALAMQRYLIQQGIAPKQITMEDQSTNTR 171
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
QN +S + Q + I+V+S++H+ R+ + ++ + + +
Sbjct: 172 QNIYYSKHYLALHQQPHTIIVTSSFHILRALRLAERQQLHAFGYGAPTPHHW-------- 223
Query: 219 NFYLTELALKEYIGILIAY 237
++ +++Y G+L Y
Sbjct: 224 ---VSRELIRDYSGLLFQY 239
>gi|312904109|ref|ZP_07763277.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|310632585|gb|EFQ15868.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|315578454|gb|EFU90645.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 401
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P + + I
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------RYTQDYI 221
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 222 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 274
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 275 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 334
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 335 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 375
>gi|89890987|ref|ZP_01202495.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89516631|gb|EAS19290.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 221
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 61/180 (33%), Gaps = 25/180 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + + ++LG + S R+ + LY +
Sbjct: 37 NASELEPAYVGLVLGASVRPDKS-------LSPILQDRVDKAYELYDKGIIKKFLLS--- 86
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GD + E L + GV DI L+ DT+ + + + + + +I+
Sbjct: 87 --GDHGQEDYDEVNAMRRYLNDKGVPNQDIFLDHAGFDTYDSMFRAREVFQ---VEELIV 141
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ +HL R+ + G+ + +D N Y T +E++ + A+
Sbjct: 142 ITQEFHLPRAIYVGKKMGLKLQGFIADNREYP-------GNAYFTR---REWLANIKAWI 191
>gi|166031681|ref|ZP_02234510.1| hypothetical protein DORFOR_01381 [Dorea formicigenerans ATCC
27755]
gi|166028658|gb|EDR47415.1| hypothetical protein DORFOR_01381 [Dorea formicigenerans ATCC
27755]
Length = 263
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 79/251 (31%), Gaps = 45/251 (17%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIF-----FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
L + + ++ K+F + + II +++
Sbjct: 37 LVLAVFFICVALGIHFNLWKMFPDILKKGIVIIFAGCLASFLIIEGLIISQ--------- 87
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ + + +++LG P ++ R+ + + + I
Sbjct: 88 MHVAGPDNLDYLIVLGAQVYKNGPSPVLKF--------RLDKAYEYLSANPETRC----I 135
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-- 175
++GG E+ + L++ G++ I LE +S T QN S +I +
Sbjct: 136 VTGGQGSNEPFTEASCMADYLVKRGIDSGRIILEDKSTTTAQNLTNSMKLISADTINHAL 195
Query: 176 -------IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+ ++++ +H+ R+ + I Y I S YL +
Sbjct: 196 DSNTTNTVGILTNDFHMFRAMQIARAQKI----------PNTYGISCGSTKVYLPNNMFR 245
Query: 229 EYIGILIAYYR 239
EY + +
Sbjct: 246 EYFAEIKFLLK 256
>gi|254557746|ref|YP_003064163.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|308181833|ref|YP_003925961.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|254046673|gb|ACT63466.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|308047324|gb|ADN99867.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 361
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/244 (21%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK------IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
ML ++ L + L + +F++ F L F L + +
Sbjct: 112 MLTLYLGLAILILPFLGNLLSSHVPQPVSYFLTVFPNLVIFYLGFWFYNYLTMLTIYQFN 171
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMH 113
P L + I++LG G S RI +R Y+ ++
Sbjct: 172 WPRL------RQDYIIVLGAGLLDGD-------RVSPLLGQRIMRGLRFYQKQQRKTHHR 218
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I SGG + E + G+ D ETQS T QN QFS +I
Sbjct: 219 AVMIFSGGQGGDETVPEGQAMLEYAIAHGLPATDGWAETQSKTTLQNMQFSKQLIAQGPV 278
Query: 174 KNII--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
KN V++ YH R+ ++ + G+ + +A F+L + ++EYI
Sbjct: 279 KNPRTIFVTNNYHTFRAGMFAKQAGLKADGIGA-----------RTARFFLPDAIIREYI 327
Query: 232 GILI 235
I +
Sbjct: 328 AIFV 331
>gi|315039245|ref|YP_004032813.1| hypothetical protein LA2_10585 [Lactobacillus amylovorus GRL 1112]
gi|312277378|gb|ADQ60018.1| hypothetical protein LA2_10585 [Lactobacillus amylovorus GRL 1112]
Length = 367
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 79/237 (33%), Gaps = 28/237 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ IF I+ + + + + ++ L+ L +
Sbjct: 121 IALIFSILVLVGPGRYLPYWLSALLASIPAIALYLGLVLYNFLVNLLLYQ------IYPR 174
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +++LG G + S +RI ++ Q III G
Sbjct: 175 HYKQDYLIVLGAGLLNGD-------QVSKLLAARINRAIQFSNRQYQKGRKRPIIIMSGG 227
Query: 123 P-QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
+ E++ GV D I +E QS +T+QN FS + +
Sbjct: 228 QGPDEKIPEALAMARFAQHRGVPTDQILIEDQSKNTYQNMLFSKRIATQDFDSDKFRATF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 288 FSNNYHIFRAALLAKEVGLKANGVGAF-----------TRLYYLPNAIIREFAGVFV 333
>gi|307273352|ref|ZP_07554597.1| hypothetical protein HMPREF9514_02117 [Enterococcus faecalis
TX0855]
gi|306509879|gb|EFM78904.1| hypothetical protein HMPREF9514_02117 [Enterococcus faecalis
TX0855]
Length = 401
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P + + I
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------RYTQDYI 221
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 222 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 274
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 275 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 334
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 335 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 375
>gi|307702098|ref|ZP_07639105.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307707431|ref|ZP_07643913.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307616383|gb|EFN95574.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307616585|gb|EFN95775.1| integral membrane protein [Streptococcus mitis NCTC 12261]
Length = 339
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 87/237 (36%), Gaps = 24/237 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++ F ++S+ + + F + I + + Y L
Sbjct: 99 IVILLFFALMSFRLGDRNELFYTNHFLNILFAFIAYSYFIFGFAFVGFML--YSILYLFI 156
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
KK + I++ G G + RI + + Y + K II SG
Sbjct: 157 PKKKHYDFIIIHGAGLLDGEK-------VTPLLKRRIDKAVEAYHNSKNPH--IKIIASG 207
Query: 121 GDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-L 178
G ++E+ N LLE V +D I LE QS T++N FS + + + K
Sbjct: 208 GQGGDEKISEAQAITNYLLEETDVPQDGIILEDQSRTTYENLLFSKELGEKLVAKPQFLF 267
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
V++ YH+ R+ Y + + +A +Y+ ++EY+ + +
Sbjct: 268 VTNDYHVFRTSTYARKLKMKGDGLGC-----------RTAGYYIPSAFIREYVALCV 313
>gi|323497618|ref|ZP_08102635.1| hypothetical protein VISI1226_22365 [Vibrio sinaloensis DSM 21326]
gi|323317367|gb|EGA70361.1| hypothetical protein VISI1226_22365 [Vibrio sinaloensis DSM 21326]
Length = 258
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 65/226 (28%), Gaps = 31/226 (13%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ L K + +L + I + + Q + ++ V+L
Sbjct: 14 YLALSLKAAKYLLVVAILLSITLFC---IDRWISYQAKDQ---VFTHHQQVTNFDVAVVL 67
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G + + RI + LY K + + GD E
Sbjct: 68 GTSKYLGKILNEYYSH-------RIEAAIELYNEGKIDNFLLS-----GDNAHRSYNEPW 115
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
LL++ V ++I L+ T + + + ++S +H +R+
Sbjct: 116 TMKRDLLKAEVPEENIFLDYAGFRTLDSIVRAKEIFDTDNFL---IISQKFHCERALFIA 172
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
IN K + + ++ ++E A+
Sbjct: 173 NSHHINAKCFAVPGPTKHSGL----------KVRIREVFARAKAFL 208
>gi|262368832|ref|ZP_06062161.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262316510|gb|EEY97548.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 259
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 75/227 (33%), Gaps = 41/227 (18%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + IFF+ F L+ F+ G IV+LG+G
Sbjct: 66 IWRWAWAIFFVWVFSLVIFFVFLGF---------------SNQQNTPHVAAPAIVVLGSG 110
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS SR+ + + + + +++SGG + +E+
Sbjct: 111 LKHGK--------PSPTLASRLDQAA----NYAKLHPNSIVVVSGGLSFQQKNSEAEAMR 158
Query: 136 NKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRSQLY 191
L++ + I E QS T N S ++ + I +V+S +H+ RS+
Sbjct: 159 QYLIDVHHIPAQRIYTEDQSTSTELNLINSKKILAKQHISLQQPIAIVTSDFHIPRSRAI 218
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G T + PL+ + L+EY +
Sbjct: 219 AIRQGYQT-------PIMISAQTPLATRYNAW---LREYFAYWSGWL 255
>gi|242372011|ref|ZP_04817585.1| membrane protein [Staphylococcus epidermidis M23864:W1]
gi|242350280|gb|EES41881.1| membrane protein [Staphylococcus epidermidis M23864:W1]
Length = 263
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 89/232 (38%), Gaps = 27/232 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
L + S I ++ L S I + + S+ S + K+ +
Sbjct: 35 LALFLIACFYISTVSIPVINGLALWLSAIAFSTFFAFICY---VSWSSAFGSHSFHKNVD 91
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+I++LG G P + R+ + +Y S + ++SGG
Sbjct: 92 LIMVLGAGIFTEQVTPML--------AERLNRAINVYHSQAKPVY---FLVSGGQGLDEP 140
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL--VSSAYHL 185
+ E++ L+ G+ D I +E QS +T+ N +S +I+ + L V+S +H+
Sbjct: 141 ITEALAMKRYLIAKGIPEDIILMENQSTNTYTNFLYSKPIIETHFKRQSQLLCVTSQFHI 200
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
RS + G+ + S + Y + +K+++G++ Y
Sbjct: 201 LRSLRLAEKLGLKFEGIGS---HTPYHFF--------SRALIKDFLGVMYQY 241
>gi|222529669|ref|YP_002573551.1| hypothetical protein Athe_1684 [Caldicellulosiruptor bescii DSM
6725]
gi|222456516|gb|ACM60778.1| protein of unknown function DUF218 [Caldicellulosiruptor bescii DSM
6725]
Length = 195
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 24/187 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ KI + ++ F + K + I++LG
Sbjct: 2 RKFLKISLCTLATVILIFAVT------------EASIIIFGISAKPKKSDCIIVLGCAVY 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS R+ LYK+ II+ G ++E+
Sbjct: 50 GD--------FPSPFFRERLNRAFELYKNGYARY----IIVCGAKGPGENISEAEAGKRY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+E GV + + E +S T++N +S ++ K+ I+VS+ +HL+R+ L + I
Sbjct: 98 LVEMGVLPEFVLKEDKSFSTYENLLYSKRIMNKKGFKSAIIVSNMFHLERAHLIAKKLKI 157
Query: 198 NTKASCS 204
N+ S
Sbjct: 158 NSSFSGV 164
>gi|255065363|ref|ZP_05317218.1| putative SanA protein [Neisseria sicca ATCC 29256]
gi|255050188|gb|EET45652.1| putative SanA protein [Neisseria sicca ATCC 29256]
Length = 224
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 84/227 (37%), Gaps = 27/227 (11%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
++F + +L F ++P ++ +Q L + + V+L
Sbjct: 21 FHLFRIRMFKKALVFILVLFFTAALLPLWIM---WRDFQVSRLDADTVRPADAAVVLS-- 75
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T + +R+ + LY++ K ++ G + + S
Sbjct: 76 -----TRSYEGGRLNPCLVARVEAAVELYRAGKVKK-----LVMSGGLSRDFQSASGNMQ 125
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH- 194
+ GV ++DI E ++ +TF+N FS I+N +++VS+ +HL R+Q+
Sbjct: 126 AIAEKMGVSKEDIIQERRAENTFENIVFSRDFIENS--PRVVIVSAGFHLARAQMMADRQ 183
Query: 195 -FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G + + + + + Y + L+E + +G
Sbjct: 184 WQGHDIQVYAAPFCSEPYGGYGFT--------VLRESAAFVKNALKG 222
>gi|298207824|ref|YP_003716003.1| hypothetical protein CA2559_06205 [Croceibacter atlanticus
HTCC2559]
gi|83850462|gb|EAP88330.1| hypothetical protein CA2559_06205 [Croceibacter atlanticus
HTCC2559]
Length = 219
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 64/219 (29%), Gaps = 27/219 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + ++ + + + + +++LG
Sbjct: 3 KIRTYLKYIVIICVAIYTVVLFVNWRVNSIGK--PLMYNDINKAPSSYTVIVLGASVYAN 60
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
S R+ LYKS K + GD + E + L
Sbjct: 61 -------GNLSPILKDRVDTAYELYKSGKAQRFLLS-----GDHGQDNYDEVNAMKDYLN 108
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV + I L+ DT+ + + + K + I+V+ +HL R+ +N
Sbjct: 109 AKGVPDEVIFLDHAGFDTYDSMYRAKYIFK---VDSAIVVTQQFHLPRALYIANALNLNY 165
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
K +D E +E I + AY+
Sbjct: 166 KGVTADKRT--------YQYLESLER--REKIANIKAYW 194
>gi|121605279|ref|YP_982608.1| hypothetical protein Pnap_2380 [Polaromonas naphthalenivorans CJ2]
gi|120594248|gb|ABM37687.1| protein of unknown function DUF218 [Polaromonas naphthalenivorans
CJ2]
Length = 253
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/240 (15%), Positives = 76/240 (31%), Gaps = 37/240 (15%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L ++ + + W + G +L R
Sbjct: 44 VLVFLGSVQAPWQHWLAWKW-----VQAGFWLWLVSLGAFFGLLAL-------RQQGQNL 91
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+IV+LG+ T +PS R+ L + + +I+SGG
Sbjct: 92 QGLRPEVIVVLGSST--------PNAQPSPTLAERLNLAYTLAQQHPK----ARVIVSGG 139
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM---IKNMQGKNIIL 178
+ ++E+ V L G+++ I +E +S T +N +S + +L
Sbjct: 140 VDFRQTVSEASVMATYLEAKGLDKSRILVEDRSTSTHENLVYSLRLLQAGGQTPQAATVL 199
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S +H R+ ++ G + Y L+EY + +
Sbjct: 200 VTSDFHTLRASWIAKNAGWKNVVTAGAPTPLYMRY----------NAWLREYFAFVSGWL 249
>gi|67921008|ref|ZP_00514527.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
gi|67857125|gb|EAM52365.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
Length = 238
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 69/224 (30%), Gaps = 22/224 (9%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR-PLLSPQWKKDGNIIVLLGN 74
+ + F M I + ++ + ++ + + I ++LG
Sbjct: 12 ISKKKSGFFHNFVTMSSILLIAFLVLIISIDWYIGNQFNQSIYSDINQIPRKKIALVLGT 71
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ + R + R+ +LY++ K I+ GD E
Sbjct: 72 SKYVNQSE---RTRYNAYYAYRMKAAAKLYQAKKVDG-----ILVSGDNSTEFYDEPSQM 123
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L++ GV I + T + + + ++ +VS +H +R+ +
Sbjct: 124 TEDLIKLGVPAQYINQDYAGFRTLDSIVRAKEISG---LESYTIVSQKFHCQRALYIAKA 180
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G N A + + + F L+E A+
Sbjct: 181 KGQNPIAFSASDIQS----------FAGIRTRLREVFARFKAFL 214
>gi|291458721|ref|ZP_06598111.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418638|gb|EFE92357.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 382
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 91/233 (39%), Gaps = 25/233 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPT-ILLKHLQFSYQRPLLSPQ 61
+ +IFL +LL + S F + + L+ S L P+
Sbjct: 132 IVYIFLWPLNGYLLPSFQKHALLRSIGNACFGTLSFSAAYLLFLMAMYCLSALLNLFHPR 191
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++D + IV+LG G P + SRI +RL + +I+SGG
Sbjct: 192 KRRDLDYIVVLGAGIRGEAVTPLL--------ASRIERGIRLLYENPR----ALLILSGG 239
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + E L GV+ I E +SL+T QN FS +++ + I +V++
Sbjct: 240 QGEGEDIPEGEAMRRYALSQGVDPGRILTEEKSLNTRQNLLFSRALMGGEK-PKIAVVTT 298
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+YH+ R+ L + I K + + ++ ++E++ L
Sbjct: 299 SYHVFRALLLARKCHIPCKGYGA-----------RTKWYFTLNALIREFLAYL 340
>gi|28379603|ref|NP_786495.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28272443|emb|CAD65367.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 361
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/244 (21%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK------IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
ML ++ L + L + +F++ F L F L + +
Sbjct: 112 MLTLYLGLAILILPFLGNLLSSHVPQPVSYFLTVFPNLVIFYLGFWFYNYLTMLTIYQFN 171
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMH 113
P L + I++LG G S RI +R Y+ ++
Sbjct: 172 WPRL------RQDYIIVLGAGLLDGD-------RVSPLLGQRIMRGLRFYQKQQRKTHHR 218
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I SGG + E + G+ D ETQS T QN QFS +I
Sbjct: 219 AVMIFSGGQGGDETVPEGQAMLEYAIAHGLPATDGWAETQSKTTLQNMQFSKQLIAQGPV 278
Query: 174 KNII--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
KN V++ YH R+ ++ + G+ + +A F+L + ++EYI
Sbjct: 279 KNPRTIFVTNNYHTFRAGMFAKQAGLKADGIGA-----------RTARFFLPDAIIREYI 327
Query: 232 GILI 235
I +
Sbjct: 328 AIFV 331
>gi|325524355|gb|EGD02447.1| hypothetical protein B1M_21438 [Burkholderia sp. TJI49]
Length = 97
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E S T++NA+F++S++++ ILV+S+Y ++R+ L F FGI+ + ++ +A
Sbjct: 3 EPDSRTTYENAKFTASILRSRHDDARILVTSSYQMRRALLDFHRFGIDPQPVYANRRDAQ 62
Query: 211 YSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
+P N E AL E +GI + G
Sbjct: 63 TGWLPRWRNIVNAEQALHELVGIAQFHVYRLLG 95
>gi|227533012|ref|ZP_03963061.1| integral membrane protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|227189413|gb|EEI69480.1| integral membrane protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 352
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 91/240 (37%), Gaps = 31/240 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
++ L++ + F ++ F L F + L + ++++
Sbjct: 109 IAIGLLLIEIAASFGRRFIPDPLYFSLAIFFGLGGFYVLLTLYNFLTVLILYNFRP---- 164
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC-KQHSMHCTIII 118
+ +++LG G + S SRI ++ Y+ K+ II
Sbjct: 165 --QPHNRTFLIVLGAGLLHGD-------QVSPLLASRIDAAIKFYRKQIKKGRPAPRIIF 215
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII- 177
SGG ++E++ L G+ D LE QS T +N QFS +I G++
Sbjct: 216 SGGKGSDEAISEAMAMQRYALGKGIAEGDTLLEDQSTTTLENMQFSKRLITQEIGESPYK 275
Query: 178 --LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YHL R+ ++ + GI ++ ++L ++EY+ +++
Sbjct: 276 ASFFTNNYHLFRAGIFARMAGIAANGVG-----------GATSFYFLPNAVIREYLALVV 324
>gi|312877810|ref|ZP_07737760.1| protein of unknown function DUF218 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795436|gb|EFR11815.1| protein of unknown function DUF218 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 195
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 66/187 (35%), Gaps = 24/187 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ KI + ++ F + K + I++LG
Sbjct: 2 RKFLKISICTLATVILIFAVT------------EASIIIFGISSKPKKSDCIIVLGCAVY 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS R+ LYK II+ G ++E+
Sbjct: 50 GD--------FPSPFFRERLNRAFELYKKGYARY----IIVCGAKGPGENISEAEAGKRY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+E GV + I E +S T++N +S ++ K+ I+VS+ +HL+R+ L + +
Sbjct: 98 LVERGVLPELILKEDKSFSTYENLLYSKRIMNKKGFKSAIIVSNMFHLRRASLIAKKLKM 157
Query: 198 NTKASCS 204
N S
Sbjct: 158 NASFSGV 164
>gi|260776084|ref|ZP_05884979.1| SanA protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260607307|gb|EEX33572.1| SanA protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 211
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 25/182 (13%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+P+ + ++ V+LG + + RI + LY++ K + +
Sbjct: 15 YTNPEQIGNFDVAVVLGTSKYLGKILNDYYTN-------RINAAIDLYQNDKVDNFLLS- 66
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
GD E LL++ V + I L+ T + + +
Sbjct: 67 ----GDNAHRSYNEPWTMKRDLLKAEVPENHIYLDYAGFRTLDSIVRAKEIFDTDNFL-- 120
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+++ +H +R+ IN K P + + Y L+E A
Sbjct: 121 -IITQKFHCERALFIANFHNINAKCFAVP--------GPSTHSGYQIR--LREVFARAKA 169
Query: 237 YY 238
Sbjct: 170 VL 171
>gi|261365693|ref|ZP_05978576.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
gi|288565787|gb|EFC87347.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
Length = 224
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 74/226 (32%), Gaps = 25/226 (11%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+R F + + +G + Y + ++L
Sbjct: 4 LFRSRNGLRYYLFRGIGLSILLILGIFSVGAW------QVYHTGSQPLPRHVRADAALVL 57
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G PS RI + LY+S + I+ +GG +K + E+
Sbjct: 58 GAAAWDK--------RPSPVFRERINHAITLYQSHRVE----KIVFTGGTSKKGYMTEAE 105
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V L+ G+ +I E S +T++N + +++ ++II+VS YHL R+
Sbjct: 106 VGRRYALKQGIPAHNIIFENTSRNTYENIRNIRPILRAEGIESIIIVSDPYHLARALEIA 165
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I S + + + L+E + +
Sbjct: 166 SDLDIEAYVSAT--PTTRFD-----QGKEKNKFLLQESYALFLYRI 204
>gi|199597870|ref|ZP_03211296.1| hypothetical protein LRH_11467 [Lactobacillus rhamnosus HN001]
gi|258509552|ref|YP_003172303.1| hypothetical protein LGG_02557 [Lactobacillus rhamnosus GG]
gi|199591306|gb|EDY99386.1| hypothetical protein LRH_11467 [Lactobacillus rhamnosus HN001]
gi|257149479|emb|CAR88452.1| Conserved domain protein [Lactobacillus rhamnosus GG]
gi|259650819|dbj|BAI42981.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
Length = 352
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 92/241 (38%), Gaps = 22/241 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML +I + + + R+ ++ L F G G + +L + +
Sbjct: 104 MLTLYIAIGLLLLEIAASFGRRFIPEPLYVALAVFFGLGGLYVLLTLYNFLTALILYNLR 163
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC-KQHSMHCTIIIS 119
+ +++LG G + S SRI ++ Y K+ II S
Sbjct: 164 PQPHNRTFLIVLGAGLLHGD-------QVSPLLASRIDTAIKFYHKQLKKGRPAPKIIFS 216
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-- 177
GG ++E++ L G+ D LE QS T +N +FS +I G+
Sbjct: 217 GGKGADEAISEALAMQRYALGKGIPEADTLLEDQSTTTLENMRFSKRLIIQEIGEAPYKA 276
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++ YHL R+ ++ + GI + ++ ++L ++EY+ +++
Sbjct: 277 SFFTNNYHLLRAGIFARMAGIAANGVGGN-----------TSFYFLPNAVIREYLALVVL 325
Query: 237 Y 237
Y
Sbjct: 326 Y 326
>gi|206971658|ref|ZP_03232608.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206733643|gb|EDZ50815.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 185
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 49 DRPSLSLQNRLDVALEYLFSHPE----AKVIVSGGQGEDEDIPEAHSMRNYLMARGIDES 104
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 105 RILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 161
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 162 PIRSKR-----------KMYVREYAAIMK 179
>gi|261210655|ref|ZP_05924947.1| SanA protein [Vibrio sp. RC341]
gi|260840140|gb|EEX66720.1| SanA protein [Vibrio sp. RC341]
Length = 217
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 61/207 (29%), Gaps = 28/207 (13%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ + S + I + Q + + V+LG I T+
Sbjct: 2 ISVVSIVSLLAIDRWVTWQTQN---NIINDTDNTPPFQVAVVLGTSKYIGKTLNEYYTN- 57
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
RI + LY+ K + + GD E LL +GV ++I
Sbjct: 58 ------RIDAAIELYQQGKVRNFLLS-----GDNAHRSYNEPWTMKRDLLRAGVPAENIS 106
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
L+ T + + + +++ +H +R+ + I ++
Sbjct: 107 LDYAGFRTLDSIVRAKQIFDTNNFL---IITQRFHCERALFIAHYQDIQASCLAVPGPSS 163
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ ++ L+E A
Sbjct: 164 HSGF----------KVRLREVFARAYA 180
>gi|154488709|ref|ZP_02029558.1| hypothetical protein BIFADO_02016 [Bifidobacterium adolescentis
L2-32]
gi|154082846|gb|EDN81891.1| hypothetical protein BIFADO_02016 [Bifidobacterium adolescentis
L2-32]
Length = 250
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 79/239 (33%), Gaps = 31/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++++ +F +++ + + ++ IG I T+ +
Sbjct: 41 LVIAAVFALLAVGIAANWWVALPRIIRGVIIAVVCIGIAIFGTV------EGCIISNMHA 94
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + +V+LG A+R R+ ++ I+SG
Sbjct: 95 RGDQHLDYVVVLGAQVRKSGPSKALRY--------RLDTAADYLRNSPDTIC----IVSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ + L G+E I E++S T +N S +I ++ +++
Sbjct: 143 GKGANEPFPEAQGMADYLKAHGIEEGRILQESKSKTTQENIVNSKKLIAGDN-ASVGIIT 201
Query: 181 SAYHLKRSQLYFQHFGIN-TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +H+ R+ G++ + + L ++E+ +
Sbjct: 202 NDFHMFRALQIAHDNGLDEAQGIAAGSPPD-----------MLVNNMVREFFAEIKFLL 249
>gi|30020365|ref|NP_831996.1| putative cytoplasmic protein [Bacillus cereus ATCC 14579]
gi|229109718|ref|ZP_04239304.1| hypothetical protein bcere0018_19790 [Bacillus cereus Rock1-15]
gi|229127675|ref|ZP_04256664.1| hypothetical protein bcere0015_21240 [Bacillus cereus BDRD-Cer4]
gi|229144871|ref|ZP_04273268.1| hypothetical protein bcere0012_20310 [Bacillus cereus BDRD-ST24]
gi|296502841|ref|YP_003664541.1| hypothetical protein BMB171_C2008 [Bacillus thuringiensis BMB171]
gi|29895916|gb|AAP09197.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
gi|228638593|gb|EEK95026.1| hypothetical protein bcere0012_20310 [Bacillus cereus BDRD-ST24]
gi|228655752|gb|EEL11601.1| hypothetical protein bcere0015_21240 [Bacillus cereus BDRD-Cer4]
gi|228673759|gb|EEL29017.1| hypothetical protein bcere0018_19790 [Bacillus cereus Rock1-15]
gi|296323893|gb|ADH06821.1| putative cytoplasmic protein [Bacillus thuringiensis BMB171]
Length = 185
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 49 DRPSLSLQNRLDVAVEYLFSHPE----AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDES 104
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 105 RILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 161
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 162 PIRSKR-----------KMYVREYAAIMK 179
>gi|17158752|ref|NP_478263.1| hypothetical protein all7616 [Nostoc sp. PCC 7120]
gi|17134701|dbj|BAB77259.1| all7616 [Nostoc sp. PCC 7120]
Length = 228
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 22/193 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
Y+ L + + +L I I L Y +P P+ + ++
Sbjct: 12 YFKLFRYLRWILLGLVISVLAKPLIATAYIG---LMTNGDRYVQPESVPKE----QVAIV 64
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G G P+ R+ ++LYK K ++ GD E
Sbjct: 65 FGAGILPNDN-------PTPMLSDRVEAAVKLYKMGKISK-----LLMTGDNSTVSYNEV 112
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ GV +I L+ T+++ + + + ++++ YHL R+
Sbjct: 113 RSMLKYAHDLGVPMKNITLDYAGFSTYESCYRAHKVFGVHK---AVVITQNYHLPRTVYT 169
Query: 192 FQHFGINTKASCS 204
+ G+ T +
Sbjct: 170 CRQLGLKTVGLGT 182
>gi|330976846|gb|EGH76877.1| hypothetical protein PSYAP_09340 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 182
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 8/170 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + L+ P
Sbjct: 16 ILFVLLILGWWLRRTRPRLAATFFAVGLGGLWLMSLPVAVEFAARKLEQVPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ SGG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAARLAKE-----SGLPILTSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+E+ + L + + S T +NA S+++++
Sbjct: 130 LHFDQPPSEASIMAQSLQDDFAVAVRWQEGL-SRTTGENATMSAAILQPQ 178
>gi|260654419|ref|ZP_05859909.1| putative Bme2 protein [Jonquetella anthropi E3_33 E1]
gi|260631052|gb|EEX49246.1| putative Bme2 protein [Jonquetella anthropi E3_33 E1]
Length = 241
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 87/243 (35%), Gaps = 35/243 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + + W LL + R ++ +L+F + L+ ++ L P+
Sbjct: 21 PLGLLLWGTALWLLLGRRKRW---LAAGLLVFLAACTPLGGKWALRAVES-----LCPPR 72
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++L G +R S S R+ ++ I+ G
Sbjct: 73 SDQKPASVLVLSGG----AVFDGVRFTASPASVRRLRFALQQTNGGP--------ILLSG 120
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
L+ L + ++ +E S T +N +FS+ +++ LV+
Sbjct: 121 IESPLLLSW--------LSERKDLREVLIERSSRTTEENFRFSAPILR-KMSGPTALVTD 171
Query: 182 AYHLKRSQLYFQ------HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+H+ R+ L+ + F S + + + ++P S T +AL+E + +L
Sbjct: 172 KFHMARAALWARFYAPDVQFVFAPVPSYAPPVRLPFDLLPSSKGLDYTTMALREALALLR 231
Query: 236 AYY 238
Sbjct: 232 DRL 234
>gi|229190360|ref|ZP_04317361.1| hypothetical protein bcere0002_20280 [Bacillus cereus ATCC 10876]
gi|228593144|gb|EEK50962.1| hypothetical protein bcere0002_20280 [Bacillus cereus ATCC 10876]
Length = 185
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + II+SGG + + E+ N L+ G++
Sbjct: 49 DRPSLSLQNRLDVALEYLFSHPE----AKIIVSGGQGEDEDIPEAHSMRNYLMVHGIDES 104
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 105 RILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 161
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 162 PIRSKR-----------KMYVREYAAIMK 179
>gi|153855830|ref|ZP_01996816.1| hypothetical protein DORLON_02837 [Dorea longicatena DSM 13814]
gi|149751871|gb|EDM61802.1| hypothetical protein DORLON_02837 [Dorea longicatena DSM 13814]
Length = 255
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 79/233 (33%), Gaps = 28/233 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
++ + + C I CF+L+ II + L + +
Sbjct: 48 ALIRLYGMPCIVEAMIGISVCFLLI---AEIKIIKGMHRNPLGKRKEHFEEDTKTGSATR 104
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I++LG +++ R+ K + +I+SGG +
Sbjct: 105 WIIVLGAQVRGRKITDSLK--------RRLDCASEYLKEHPEVH----VIVSGGQGKDEE 152
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ L G++R I E S++T +N +FS ++I + + +VS+ +H+ R
Sbjct: 153 VTEAYAMARYLECEGLDRRRIVQEDVSVNTLENLKFSRNLIAD-VDTPVGIVSNNFHVYR 211
Query: 188 SQLYFQHFGIN-TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+Y + G + ++E + + +
Sbjct: 212 GCVYAKRAGFKEPFPIPA-----------SCHPLLFPNYFVRECFAVWKLWLK 253
>gi|325291319|ref|YP_004267500.1| protein of unknown function DUF218 [Syntrophobotulus glycolicus DSM
8271]
gi|324966720|gb|ADY57499.1| protein of unknown function DUF218 [Syntrophobotulus glycolicus DSM
8271]
Length = 216
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 26/209 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ + + + I +++ + S I++LG
Sbjct: 1 MILFLLGITISLSTYIFAVN--HYVEKQGAEYICSLDEIPQAEAILILGAYV-------L 51
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
S R+ LYK K II GD + E + L+ GV
Sbjct: 52 PNGTVSGMLEDRLAVGDELYKMGKAPK-----IIVSGDHGQSDYDEVNSMKSFLVHKGVP 106
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DI ++ T+++ + + K + I+V+ YHLKR+ + GI +
Sbjct: 107 AQDIFMDHAGFSTYESMYRARDIFKVQRL---IIVTQEYHLKRAVFDARGLGIEAGGVSA 163
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGI 233
D + + L+E I
Sbjct: 164 DRHD---------YGQVMDTYKLREIIAR 183
>gi|314967236|gb|EFT11335.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
Length = 195
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 17/160 (10%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ + ++ ++LG PS R+ LY+S K
Sbjct: 14 KVHDVADTEPRDVAIVLGAQV-------LPSGTPSAYLRGRLDVAADLYRSGKA-----K 61
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+ GD ++ E V L+ GV I + LDT+ + +
Sbjct: 62 VILVSGDNRETHYNEPKVMKTYLVSKGVPAARIVEDFAGLDTYDTCVRARRIFG---VDR 118
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASC--SDYLNAYYSI 213
I+V+ YH R+ + G++ + + +
Sbjct: 119 AIMVTQDYHEIRTVATCRMTGLDAVGVPDRTQPRDNVWWY 158
>gi|171915828|ref|ZP_02931298.1| hypothetical protein VspiD_31695 [Verrucomicrobium spinosum DSM
4136]
Length = 260
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 82/226 (36%), Gaps = 33/226 (14%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + + ++ +S LL +GI+ + S+++ S + ++LG
Sbjct: 37 AFIRRWLARLMILSVHALLIVGGCYGIVWAL-------SHKQVYRSVDDIPVRYVGLVLG 89
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+ P + +R+ +L ++ K ++ GD + G E
Sbjct: 90 CVKKVGPHD-------NAFFNARVDAAAKLLEAGKVQ-----FLLVSGDNNRDGQNEPQD 137
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L+ G+ D I + T + + + + ++S +H +R+ +
Sbjct: 138 MKDALIAKGIPADRIYCDYSGFRTLDSVVRARQIFGQRD---MTIISQNFHNERALYMAR 194
Query: 194 HFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
FG+ ++ A ++ + + ++ L+E ++A
Sbjct: 195 RFGLPDSVAFNAEDADPQWMF----------KMYLREIGARVMAVL 230
>gi|295693841|ref|YP_003602451.1| integral hypothetical protein [Lactobacillus crispatus ST1]
gi|295031947|emb|CBL51426.1| Integral membrane protein [Lactobacillus crispatus ST1]
Length = 367
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 83/237 (35%), Gaps = 28/237 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ I I+ R + + + ++ L+ L +
Sbjct: 121 LALIISIIVLLGPGKYLPRWLSLALASIPAIAIYLGLVLYNFLVNLLLYQIYPRTYHQ-- 178
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI-IISGG 121
+ +++LG G + S +RI ++ Q I I+SGG
Sbjct: 179 ----DYLIVLGAGLINGD-------QVSKLLAARINRAIQYSNRQYQKGRKRPILIMSGG 227
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
++E++ + GV D I LE QS +T++N FS + G +
Sbjct: 228 QGADEKISEALAMSRFAQRRGVSVDRILLEDQSKNTYENMLFSKRIATKDFGNSHFKARF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 288 FSNNYHIFRAALLAKEVGLKANGVGAY-----------TRFYYLPNAIIREFAGVFV 333
>gi|187777765|ref|ZP_02994238.1| hypothetical protein CLOSPO_01357 [Clostridium sporogenes ATCC
15579]
gi|187774693|gb|EDU38495.1| hypothetical protein CLOSPO_01357 [Clostridium sporogenes ATCC
15579]
Length = 242
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 60/153 (39%), Gaps = 15/153 (9%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
++P+ + I++LG + R+ + LYK+ K +
Sbjct: 59 VNPKDVPEAEAILVLGAYVKPN-------GKLCDMLEDRVAVGIDLYKNNKAKK-----L 106
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ GD + E + GV+++DI L+ T+++ + + K + I
Sbjct: 107 LFSGDHGQVNYDEVNGMKKVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKAKKI---I 163
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+V+ YHL R+ + G++ SD N +
Sbjct: 164 IVTQQYHLMRAVYIARQLGLDAYGVNSDQRNYW 196
>gi|160899211|ref|YP_001564793.1| hypothetical protein Daci_3776 [Delftia acidovorans SPH-1]
gi|160364795|gb|ABX36408.1| protein of unknown function DUF218 [Delftia acidovorans SPH-1]
Length = 280
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 82/246 (33%), Gaps = 33/246 (13%)
Query: 2 LLSWIFLIVSYWH-LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +F+ S W + + +R ++ L GW + L+ L F S
Sbjct: 59 VLGLLFMACSLWRSAIARRLRASAWLRRAWWL----GWAALAMWLVSLLVFWAHLLSASS 114
Query: 61 --QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ IV+LG+ T +PS R+ L + ++
Sbjct: 115 GLPPDQPVQAIVVLGSATR--------DGQPSLTLAQRLDRAAELAARQPK----ALVLT 162
Query: 119 SGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI- 176
SGG +E + L + + + + +E +S T N +S +++ +
Sbjct: 163 SGGVDFGESESEGAIMARYLQQRHGLPPERLLMEERSTSTALNLAWSLPLLQARGVEPQA 222
Query: 177 --ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V+S +H R+ + G +A L+EY ++
Sbjct: 223 AIAIVTSDFHTLRAGWIAERSGYG-QAFTVGAPTPVT---------IRANAWLREYFAVI 272
Query: 235 IAYYRG 240
+ G
Sbjct: 273 SGWVLG 278
>gi|317131219|ref|YP_004090533.1| protein of unknown function DUF218 [Ethanoligenens harbinense
YUAN-3]
gi|315469198|gb|ADU25802.1| protein of unknown function DUF218 [Ethanoligenens harbinense
YUAN-3]
Length = 255
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 82/235 (34%), Gaps = 35/235 (14%)
Query: 3 LSWIFLIVSYW--HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ IFL W LC ++ + +GW ++ ++ L S+ P
Sbjct: 44 VAIIFLPALLWVLRRLCGRYARVVLRLLAAACIAGLGWLLLSFGVI--LAHSF------P 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+V+LG PS RI K+ Q I SG
Sbjct: 96 GQPPQDATVVVLGAKVQGR--------TPSIDLMGRIDAAGTYLKAHPQAFC----IASG 143
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-L 178
G + + E+ + L++ G+ I L+ S +T QN + + ++I+ + L
Sbjct: 144 GKGPEEDITEAESIRDTLVQRHGIAPARIALDDTSTNTVQNLRNARTIIRQRGLPVHVAL 203
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
VS +HL R+ + + G+ +D + L+E +
Sbjct: 204 VSDGFHLFRAGIIAKRQGLEPFGVPADTDWRLNGYL-----------YLREIFAL 247
>gi|258540756|ref|YP_003175255.1| hypothetical protein LC705_02565 [Lactobacillus rhamnosus Lc 705]
gi|257152432|emb|CAR91404.1| Conserved domain protein [Lactobacillus rhamnosus Lc 705]
Length = 352
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 92/241 (38%), Gaps = 22/241 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML +I + + + R+ ++ L F G G + +L + +
Sbjct: 104 MLTLYIAIGLLLLEIAASFGRRFIPEPLYVALAVFFGLGGLYVLLTLYNFLTALILYNLR 163
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC-KQHSMHCTIIIS 119
+ +++LG G + S SRI ++ Y K+ II S
Sbjct: 164 PQPHNRTFLIVLGAGLLHGD-------QVSPLLASRIDTAIKFYHKQLKKGRPAPKIIFS 216
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-- 177
GG ++E++ L G+ D LE QS T +N +FS +I G+
Sbjct: 217 GGKGADEAISEALAMQRYALGKGIPEADTLLEDQSTTTLENMRFSKRLIIQEIGEAPYKA 276
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++ YHL R+ ++ + GI + ++ ++L ++EY+ +++
Sbjct: 277 SFFTNNYHLLRAGIFARMAGIAANGVGGN-----------TSFYFLPNAVIREYLALVVL 325
Query: 237 Y 237
Y
Sbjct: 326 Y 326
>gi|254472459|ref|ZP_05085859.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211958742|gb|EEA93942.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 239
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 79/222 (35%), Gaps = 28/222 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + F LLF L +P + K + IV+L G
Sbjct: 33 RKSFVRRAVRFFFLLFLICSVAFAAGFLWF---VEVLQPAVQAVVPKHADGIVVLTGGR- 88
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
RI +++ L ++ + + + +A
Sbjct: 89 -----------------DRISQSLDLLETGSAKRLLISGVHP--STSAKQIARLNSKRMW 129
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L + V+ D ++L+T NA+ ++S ++ Q ++++V+SAYH+ R+ Q
Sbjct: 130 LFDCCVDLDR-----KALNTIGNAEETASWVRKNQFNSLLVVTSAYHMPRALAELQVRLP 184
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S + + + +T+L L+EY+ ++ R
Sbjct: 185 EADLYPSPVYHKELDLEHWYESSSITKLLLREYVKYILVRLR 226
>gi|257789846|ref|YP_003180452.1| hypothetical protein Elen_0069 [Eggerthella lenta DSM 2243]
gi|257473743|gb|ACV54063.1| protein of unknown function DUF218 [Eggerthella lenta DSM 2243]
Length = 333
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 26/185 (14%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y ++D + IV+ G G + P + +R+ + + L+++
Sbjct: 145 YSWLYRRLPKRRDYDYIVVHGAGLSGTKPTPLL--------AARLDKAVELWEA---DHR 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNM 171
II SGG ++E+ L+E V D + E +S T +N + S +++
Sbjct: 194 RAVIIASGGQGADEEVSEAEAMRTYLVEERGVPADAVIEENRSTTTMENLRNSKAIMDAR 253
Query: 172 QG---KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
G +V+S YH+ R+ Y G+ S +A ++ ++
Sbjct: 254 SGAGAYRAAVVTSDYHVFRTAEYAHKIGLAADGVGS-----------RTARYFWPTAFIR 302
Query: 229 EYIGI 233
EY+ +
Sbjct: 303 EYVAV 307
>gi|269837462|ref|YP_003319690.1| hypothetical protein Sthe_1433 [Sphaerobacter thermophilus DSM
20745]
gi|269786725|gb|ACZ38868.1| protein of unknown function DUF218 [Sphaerobacter thermophilus DSM
20745]
Length = 216
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 18/176 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG PS +R+ L+++ I+++G
Sbjct: 54 DETAEADAIVVLG--------TAQFDGRPSPTFQARLDHARALFEAG----YAPLIVLTG 101
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + +E+ N L+E GV + + ++ + + ++ I+LVS
Sbjct: 102 GAAEGDWTSEAEAGRNYLIEQGVPSGVLLSVPAGRTSSESLREAEPELRERGISRILLVS 161
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+H+ R + + G + AS + ++ +E L
Sbjct: 162 DPFHMFRVKRIARDLGFSPLASPT--RSSPIREDSSLEY----RYMAREIGAYLAY 211
>gi|197334804|ref|YP_002156375.1| SanA protein [Vibrio fischeri MJ11]
gi|197316294|gb|ACH65741.1| SanA protein [Vibrio fischeri MJ11]
Length = 209
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 66/207 (31%), Gaps = 25/207 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+ + I I + + + + + ++LG T IR +
Sbjct: 2 VVAIIATSAILAPDIYMSLSTQSQLYKQVEALPEQETALVLG-------TSKYIRRTLNP 54
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
RI + L+K K + GD E LL++G+ D I L+
Sbjct: 55 YYQYRIDAAIELFKQNKVSHFLLS-----GDNAHRSYNEPWTMKRDLLKAGIPEDRITLD 109
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
T + Q + + +VS +H +R+ HF ++T
Sbjct: 110 YAGFRTLDSVQRAKEIFDANSLT---IVSQQFHCQRAVFIANHFDMDTVCLVV------- 159
Query: 212 SIIPLSANFYLTELALKEYIGILIAYY 238
P + + T++ +E + A
Sbjct: 160 ---PSPSGWANTKIRFREVLARTKAVL 183
>gi|229074933|ref|ZP_04207940.1| hypothetical protein bcere0024_19940 [Bacillus cereus Rock4-18]
gi|228708161|gb|EEL60327.1| hypothetical protein bcere0024_19940 [Bacillus cereus Rock4-18]
Length = 166
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
P +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 30 DRPFLSLQNRLDVALEYLYSHPE----VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDES 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E +S +T++N +FS + ++VS+ YHL R+++ + GI +A ++
Sbjct: 86 RILMEDRSTNTYENLKFSMDLFDVKH---AVVVSNTYHLYRTKIIARRLGIKMEALAAET 142
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 143 PMRSKR-----------KMYVREYAAIMK 160
>gi|326424076|ref|NP_761614.2| SanA protein [Vibrio vulnificus CMCP6]
gi|319999454|gb|AAO11141.2| SanA protein [Vibrio vulnificus CMCP6]
Length = 245
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 31/226 (13%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W L + I +LF I + + SY + ++ V+L
Sbjct: 11 WISLKRLIGGSLVAILCAILFVIIVDRWVSLQASDKIITSY-------DQVEGFDVAVVL 63
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G T I + RI + LY+ K + + GD E
Sbjct: 64 G-------TSKYIGRTLNTYYTHRIDAAIELYRQNKVQHLLLS-----GDNAHRSYNEPW 111
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
LL++GV +I L+ T + + + + +V+ +H +R+
Sbjct: 112 TMKRDLLKAGVPETNIHLDYAGFRTLDSIVRAKKIFASDHFL---IVTQRFHCERALFIA 168
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ IN + + + + +E + + A+
Sbjct: 169 NAYQINARCLAVSGPSNSK---------QIWSMRSREVLARVKAFI 205
>gi|228952619|ref|ZP_04114695.1| hypothetical protein bthur0006_20170 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229069806|ref|ZP_04203089.1| hypothetical protein bcere0025_20080 [Bacillus cereus F65185]
gi|229150501|ref|ZP_04278717.1| hypothetical protein bcere0011_20520 [Bacillus cereus m1550]
gi|228632994|gb|EEK89607.1| hypothetical protein bcere0011_20520 [Bacillus cereus m1550]
gi|228713341|gb|EEL65233.1| hypothetical protein bcere0025_20080 [Bacillus cereus F65185]
gi|228807085|gb|EEM53628.1| hypothetical protein bthur0006_20170 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 185
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 49 DRPSLSLQNRLDVALEYLFSHPE----AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDES 104
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 105 RILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 161
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 162 PIRSKR-----------KMYVREYAAIMK 179
>gi|37679647|ref|NP_934256.1| SanA protein [Vibrio vulnificus YJ016]
gi|37198391|dbj|BAC94227.1| SanA protein [Vibrio vulnificus YJ016]
Length = 245
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 31/226 (13%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W L + I +LF I + + SY + ++ V+L
Sbjct: 11 WISLKRLIGGSLVAILCAILFVIIVDRWVSLQASDKIITSY-------DQVEGFDVAVVL 63
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G T I + RI + LY+ K + + GD E
Sbjct: 64 G-------TSKYIGRTLNTYYTHRIDAAIELYRQNKVQHLLLS-----GDNAHRSYNEPW 111
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
LL++GV +I L+ T + + + + +V+ +H +R+
Sbjct: 112 TMKRDLLKAGVPETNIHLDYAGFRTLDSIVRAKKIFASDHFL---IVTQRFHCERALFIA 168
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ IN + + + + +E + + A+
Sbjct: 169 NAYQINARCLAVSGPSNSK---------QIWSMRSREVLARVKAFI 205
>gi|283471580|emb|CAQ50791.1| membrane protein [Staphylococcus aureus subsp. aureus ST398]
Length = 322
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 96/231 (41%), Gaps = 32/231 (13%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ + + I K M +L S I I + + + K+ +I
Sbjct: 98 ALLFISTIQSPIVKGMSMWLAILCLSLILTFICYLV--------WTVSYRHRSYTKEVDI 149
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG G P + +R+ + +Y+ II+SGG +
Sbjct: 150 IIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS---ATKIIVSGGQGPDEPI 198
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV--SSAYHLK 186
+E++ L+ GV++ DI +E+ S++T+ N +S +I N+ + + +V +S +H+
Sbjct: 199 SEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVL 258
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ Q G++ S Y+ + + +K+Y+G++ Y
Sbjct: 259 RALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDYLGVMYQY 298
>gi|270293195|ref|ZP_06199406.1| integral membrane protein [Streptococcus sp. M143]
gi|270279174|gb|EFA25020.1| integral membrane protein [Streptococcus sp. M143]
Length = 340
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 24/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + F+I++ + + F + I L Y L
Sbjct: 101 VILFFFVIMAIRMSDTNGLFYTNHLVNIFFFFLIYSYLIFGFAFAGFLL--YSILYLFIP 158
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KK + I++ G G + +RI + + Y+ + + +I SGG
Sbjct: 159 KKKHYDFIIIHGAGLLNGEK-------VTPLLKNRIDKAVEAYRQ--SSNPNVKLIASGG 209
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-LV 179
++E+ N LLE V R+ I LE S T++N FS M + + V
Sbjct: 210 RGGDEKISEAQAICNYLLEETDVPREAILLEESSTTTYENLLFSKEMGEKLVASPRFLFV 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + + +A +Y+ ++EY+ + +
Sbjct: 270 TNDYHVFRTSTYARQLRMKGDGLGC-----------RTAGYYIPSAFIREYVALCV 314
>gi|227902634|ref|ZP_04020439.1| integral membrane protein [Lactobacillus acidophilus ATCC 4796]
gi|227869540|gb|EEJ76961.1| integral membrane protein [Lactobacillus acidophilus ATCC 4796]
Length = 343
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 80/237 (33%), Gaps = 28/237 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ IF ++ + + + + ++ L+ L +
Sbjct: 97 IALIFSVIFILGPGRYLPHWLSALLASIPAIAIYLGLVLYNFLVNLLLYQ------IYPR 150
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +++LG G + S +RI ++ Q III G
Sbjct: 151 HYKQDYLIVLGAGLINGD-------QVSKLLAARINRAIQFSNRQYQKGRKRPIIIMSGG 203
Query: 123 P-QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
+ E++ GV D I +E QS +T+QN FS + N G
Sbjct: 204 QGPDEKVPEALAMAKFAQHRGVSPDHILIEDQSKNTYQNMLFSKQLATNDFGGPNFKATF 263
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 264 FSNNYHIFRAALLAKEVGLKANGVGAF-----------TRLYYLPNAIIREFAGVFV 309
>gi|47565636|ref|ZP_00236676.1| hypothetical protein cytosolic protein [Bacillus cereus G9241]
gi|47557272|gb|EAL15600.1| hypothetical protein cytosolic protein [Bacillus cereus G9241]
Length = 185
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 77/206 (37%), Gaps = 30/206 (14%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ + I I + R LS +++LG P
Sbjct: 4 WIFLIILLLPPIYIIYMTFRMNKVAREKLSYHSP----YVLILGAKLFGD--------RP 51
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S +R+ + S +I+SGG + + E+ N L+ G++ I
Sbjct: 52 SLSLQNRLDVALEYLVSHP----TAKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRIL 107
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 108 IEDQSTNTYENVKFSMDLYDVKH---AVVVSNTYHLYRTKIIAKRLGLKMEALAAETPMR 164
Query: 210 YYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 165 SKR-----------KMYVREYAAIMK 179
>gi|315659320|ref|ZP_07912184.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
gi|315495745|gb|EFU84076.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
Length = 317
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
F LF + I T+ L + + I++LG G P +
Sbjct: 109 VFNGLFIWFSLIAISTLTTFALYLCFSSAFGRMTNHCTFDGIIVLGAGIFTEAVTPLL-- 166
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
SR+ + +Y HCTII+SGG + ++E++ LL GV
Sbjct: 167 ------ASRLNRALSIYNQQ----SHCTIIVSGGQGKDEPISEALAMKRYLLSHGVPEQS 216
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIIL--VSSAYHLKRSQLYFQHFGINTKASCS 204
I +E S +T +N +S S+I M K L V+S +H+ R+ + Q FG+ + S
Sbjct: 217 IIMEAHSTNTAENFLYSKSIIDAMTPKPNKLLVVTSQFHILRALRFAQKFGLPVQGIGS 275
>gi|306823505|ref|ZP_07456880.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|304553212|gb|EFM41124.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
Length = 348
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 88/236 (37%), Gaps = 23/236 (9%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ +W I L++S + L + + ++ + +F+ + + +
Sbjct: 102 LPFAWGIMLLLSGYWFLWGPGQGMSGSEFYVRVMTFVSMMVNYIPIALFGVWFSNDICYK 161
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ I++LG + R+ + ++ TII S
Sbjct: 162 SGKTPETEYIIVLGCSILDD-------GTVTPLLRGRLDAAIAAWEQG---GRRATIITS 211
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIIL 178
GG ++ES N LL GV I LE +S T +N +FS +++ G + +
Sbjct: 212 GGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAIMDARGGAAHCTI 271
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S+YH R+ ++ + GIN +A F+ +EYI ++
Sbjct: 272 ATSSYHCLRAAMFARRLGINASCVG-----------GHTAAFFYPAAFFREYIALI 316
>gi|254523274|ref|ZP_05135329.1| periplasmic protein [Stenotrophomonas sp. SKA14]
gi|219720865|gb|EED39390.1| periplasmic protein [Stenotrophomonas sp. SKA14]
Length = 210
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 64/210 (30%), Gaps = 28/210 (13%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ ++F + LL + + I++LG
Sbjct: 15 WLWRLFVVLVIWLLGVTAWIVWVGER----------------DQAAKADAIIVLGAAAYD 58
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS RI + LY++ I G +ES V
Sbjct: 59 AK--------PSPVFEERIRHGLDLYEAQYAP---LLIFTGGYGGSGARFSESQVARRYA 107
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L+ GV D I +ET S +T QN + ++ +I+VS H+ R+ + GI+
Sbjct: 108 LKHGVPDDAILIETASRNTVQNLIEAKRLMDQRNLHRVIIVSDPLHMARALRLSKALGID 167
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALK 228
AS + + S
Sbjct: 168 ALASSTP-STRFRSFHTSWRFLVQEIYFFH 196
>gi|323343494|ref|ZP_08083721.1| membrane protein SanA [Prevotella oralis ATCC 33269]
gi|323095313|gb|EFZ37887.1| membrane protein SanA [Prevotella oralis ATCC 33269]
Length = 219
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 20/209 (9%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
LLF+ +G+ + + + + +R + ++ + I G + P+
Sbjct: 12 LLFTALGFCAVCIAAIVYCNYDVKR-AAEGRMYENVSQIPARRVGLLLGTNPKGRTGAPN 70
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+RI T LY+S K + I+ G E L+ GV I L
Sbjct: 71 PYYTARIDATAELYRSGK-----ISRILISGANPSETYNEPEQMKADLMAQGVPDSVIYL 125
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS-DYLNA 209
+ L T + + + ++S +H +R+ + GI+ A + D+ N
Sbjct: 126 DYAGLRTLDSVVRAKEIFGLHTFT---IISQQFHNERALYLSRAEGIDAIAFNAGDFQNR 182
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYY 238
++ + +EY+ A+
Sbjct: 183 WWQF----------RMKCREYLARTKAHI 201
>gi|319947009|ref|ZP_08021243.1| hypothetical protein HMPREF9421_1424 [Streptococcus australis ATCC
700641]
gi|319747057|gb|EFV99316.1| hypothetical protein HMPREF9421_1424 [Streptococcus australis ATCC
700641]
Length = 342
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 106/261 (40%), Gaps = 44/261 (16%)
Query: 1 MLLSWIFLIVSYWHLLC---QSIRKIFFMSCFMLLFSFIGWGIIPTI------------- 44
++ S +FL+ + ++ + + + + + + + +P
Sbjct: 74 IIFSTVFLLFNGHQMISFEGKRLANLLSLLYGIFIIGALALHFLPDFPGKDILIYPTDFA 133
Query: 45 -----LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
L Y +K+ + I++LG+G P + R+ +
Sbjct: 134 LFYSTFLYLSYVLYGTFCNYFPVRKEPDAIIVLGSGLIGDKVPPLL--------AQRLTK 185
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+Y+ + +I+SGG +E+ N L+E GV ++DI +E +S TF+
Sbjct: 186 GKAIYEQFEGR---PKLIVSGGQGADELTSEATAMANYLIEQGVPKEDILIENRSRTTFE 242
Query: 160 NAQFSSSMIKNMQGKNIILV-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
N FS +++++ +LV ++++H R+ ++ + I S+ +A
Sbjct: 243 NLTFSKAILEDQGLGKSVLVVTNSFHALRAGVFMRRLKI-----------PGRSVGSKTA 291
Query: 219 NFYLTELALKEYIGILIAYYR 239
+YL ++E +G++ Y++
Sbjct: 292 FYYLPSAWIRETVGLVSLYWK 312
>gi|261406200|ref|YP_003242441.1| hypothetical protein GYMC10_2356 [Paenibacillus sp. Y412MC10]
gi|261282663|gb|ACX64634.1| protein of unknown function DUF218 [Paenibacillus sp. Y412MC10]
Length = 217
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
++ + + ++ ++LG P +R R+ + Y +
Sbjct: 43 WKIESAVSRPAEKADVGIILGASMWGDQPSPGLR--------ERLEHALVEYNAG---RF 91
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I+ G D ++ E+ N L+E+GV + I LE ++ T++N +S ++++
Sbjct: 92 DTFIVTGGLDKPEYNYTEAEGMRNFLVEAGVPEERIFLENEATSTYENLLYSQAIMEEHG 151
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGIN 198
I+V+ YH R+ +
Sbjct: 152 WNTAIIVTHDYHGTRAMEVATALDYD 177
>gi|309802755|ref|ZP_07696859.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
gi|308220819|gb|EFO77127.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
Length = 346
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 88/236 (37%), Gaps = 23/236 (9%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ +W I L++S + L + + ++ + +F+ + + +
Sbjct: 100 LPFAWGIMLLLSGYWFLWGPGQGMSGSEFYVRVMTFVSMMVNYIPIALFGVWFSNDICYK 159
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ I++LG + R+ + ++ TII S
Sbjct: 160 SGKTPETEYIIVLGCSILDD-------GTVTPLLRGRLDAAIAAWEQG---GRRATIITS 209
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIIL 178
GG ++ES N LL GV I LE +S T +N +FS +++ G + +
Sbjct: 210 GGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAIMDARGGAAHCTI 269
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S+YH R+ ++ + GIN +A F+ +EYI ++
Sbjct: 270 ATSSYHCLRAAMFARRLGINASCVG-----------GHTAAFFYPAAFFREYIALI 314
>gi|325263793|ref|ZP_08130526.1| hypothetical protein HMPREF0240_02792 [Clostridium sp. D5]
gi|324030831|gb|EGB92113.1| hypothetical protein HMPREF0240_02792 [Clostridium sp. D5]
Length = 239
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 76/236 (32%), Gaps = 29/236 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
S + HLL + I WG+ ++ + +
Sbjct: 31 FSLFWPAAGVLHLLLAYFAPGGTAGHLAVTVVLICWGVFLYT------EAWICGAMLKKT 84
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + I++LG +++ R+ + +I+SGG
Sbjct: 85 RDEVPYIIILGAQVRGTRITNSLK--------RRLDAA----CEYLEQHTDTKVIVSGGQ 132
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E+ + L G++ I E S T++N + SS +I + + +V++
Sbjct: 133 GIGEDITEAAAMADYLEIRGIDSSRIYKEDTSTSTWENMKNSSRIIGD-PRQPCAVVTNN 191
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+HL R+ L + G + I S ++E+ +L
Sbjct: 192 FHLYRALLIGKKAGF----------TNLHGISASSNPVLQLNYMVREFFALLWLKM 237
>gi|298695620|gb|ADI98842.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 322
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ I + + + + F + C LL +FI + + + + K+
Sbjct: 99 LLFISTIQSPIVKGLSMWFAILCLSLLLTFICYLV------------WTVSYRHRSYNKE 146
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+II++LG G P + +R+ + +Y+ II+SGG
Sbjct: 147 VDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS---ATKIIVSGGQGPD 195
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV--SSAY 183
+ E++ L+ GV++ DI +E+ S++T+ N +S +I N+ + + +V +S +
Sbjct: 196 EPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTSQF 255
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
H+ R+ Q G++ S Y+ + + +K+Y+G++ Y
Sbjct: 256 HVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDYLGVMYQY 298
>gi|183219644|ref|YP_001837640.1| putative vancomycin sensitivity protein SanA [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189909782|ref|YP_001961337.1| SanA-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167774458|gb|ABZ92759.1| SanA-related protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778066|gb|ABZ96364.1| Putative vancomycin sensitivity protein SanA; putative signal
peptide [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 245
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 68/225 (30%), Gaps = 26/225 (11%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
++ F+L+F +G+ + + L + + +P + + ++ G
Sbjct: 12 LRFLSRVKWKSLFLGFILVFGILGFVSLASNLGFWIVYQNSIHTNNPSEIPEAEVAIVPG 71
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS R+ + LYK K + + GD K E
Sbjct: 72 AAVYGKI--------PSPILMDRLVCGLDLYKQGKVKKILLS-----GDNGKSDYNELRP 118
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+L V +DI ++ T + + I VS ++ L R+ +
Sbjct: 119 MLEYMLSHEVRPEDIFVDHAGFRTLDTLIRAKEVFLVK---KAIFVSQSFFLPRAIYLGK 175
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + T +E+ ++A++
Sbjct: 176 ELELELYGYECNLRT----------YKKETYYLFREFSARMLAWW 210
>gi|323142849|ref|ZP_08077561.1| putative protein SanA [Succinatimonas hippei YIT 12066]
gi|322417391|gb|EFY08013.1| putative protein SanA [Succinatimonas hippei YIT 12066]
Length = 247
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 26/217 (11%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
KI + + F + ++ + + F S + +LLG + +
Sbjct: 15 RFIKILAYLASIAILVFAMFLLLGILRISSFAF---NTYDSYDDVPYNKVGLLLGTSSNV 71
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P +P+ +RI LY+ K I+ GD + E L
Sbjct: 72 AP------GQPNEYFTNRIMAAANLYRHKKIDY-----ILVSGDNRHASYNEPRQMMQAL 120
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L++GV +D I + T + + + + ++S +H +R+ H GI+
Sbjct: 121 LKAGVPQDRIVADYAGFRTNDSVIRAHKVF---MLNKVTIISQEFHNERALFIANHLGID 177
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + S ++ L+E+ +
Sbjct: 178 AIGFNASDPYSEGS---------NFKVKLREFFARIK 205
>gi|269124570|ref|YP_003297940.1| hypothetical protein Tcur_0298 [Thermomonospora curvata DSM 43183]
gi|268309528|gb|ACY95902.1| protein of unknown function DUF218 [Thermomonospora curvata DSM
43183]
Length = 230
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 24/173 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + ++LG PS R+ LY++ K I+ GD
Sbjct: 55 EAAPVALVLGAAAWGDA--------PSPFLAGRLDAAAELYRAGK-----VRAILVTGDN 101
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ G E V N L G+ + + DT+ + + + + I+V+ +
Sbjct: 102 SREGYDEPTVMWNYLTAKGIPGHKVVRDYAGFDTWDSCVRAKRIFG---VERAIVVTQTF 158
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
HL R+ + G+ D + +P + +E + L A
Sbjct: 159 HLPRAVALCRAAGLEATGVGHDSMATAA--LPTCYGY------FRETLASLKA 203
>gi|218295589|ref|ZP_03496385.1| protein of unknown function DUF218 [Thermus aquaticus Y51MC23]
gi|218243748|gb|EED10275.1| protein of unknown function DUF218 [Thermus aquaticus Y51MC23]
Length = 211
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 16/173 (9%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
LLSP + IV+LG PS R+ + LY+
Sbjct: 12 FLLSPVLAAEYAWIVVLGAA--------QYGGRPSPALERRLLAALALYQKGLA----PR 59
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I ++GG L+E L+ GV ++ + ET+S T+QN F +
Sbjct: 60 IAVAGGKAAGDTLSEGEAGCRYLMARGVPQEALLCETRSQSTYQNLLFL----RPHLEGR 115
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
I+LV+ A HL R+ + G+ + + S L L+
Sbjct: 116 ILLVTDAPHLPRALFLARLLGLKAEGYPVPGRYPPQYWLRESLYRLWLYLGLR 168
>gi|295106342|emb|CBL03885.1| Uncharacterized conserved protein [Gordonibacter pamelaeae
7-10-1-b]
Length = 333
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 26/185 (14%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y ++D + IV+ G G + P + +R+ + + L+++ +
Sbjct: 145 YSWLYRRLPKRRDYDYIVVHGAGLSGTKPTPLL--------AARLDKGVELWEAGARR-- 194
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNM 171
II SGG + E+ L+E V D I E +S T +N + S +++
Sbjct: 195 -AIIIASGGQGADEEVPEAQAMRAYLMEERGVPVDAIIEEDRSTTTMENLRNSKAIMDAR 253
Query: 172 QGKNII---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
G +V+S YH+ R+ Y G+ S +A ++ ++
Sbjct: 254 SGAGQYRAAVVTSDYHVFRTAEYAHKIGLAADGVGS-----------KTARYFWPTAFIR 302
Query: 229 EYIGI 233
E++ +
Sbjct: 303 EFVAV 307
>gi|116334369|ref|YP_795896.1| hypothetical protein LVIS_1800 [Lactobacillus brevis ATCC 367]
gi|116099716|gb|ABJ64865.1| hypothetical protein LVIS_1800 [Lactobacillus brevis ATCC 367]
Length = 329
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 30/210 (14%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
F+ +FS + ++ +L + + + IV+LG G
Sbjct: 124 LSFIPIFSIYLGILFGASIIGYL-------RANVWRARRADTIVILGAGLRHG------- 169
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ +R+ ++L T+I++GG L E+ L+ G ++
Sbjct: 170 SQIGRTLANRLDAALKLAHRQSTP---TTLIVTGGQGPDEHLTEAEAMTTYLVNHGWPQE 226
Query: 147 DIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I E+++ T N +S + QG +++V++ YHL R++ G+ +
Sbjct: 227 RIIQESRATSTLTNLLYSQRLWSQLPHQGGRVVIVTNNYHLFRAEHLASQLGLLLGGYPA 286
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+P + +E++ I+
Sbjct: 287 ---PTRRGYLPAAWA--------REFLAII 305
>gi|295838336|ref|ZP_06825269.1| SanA protein [Streptomyces sp. SPB74]
gi|197695869|gb|EDY42802.1| SanA protein [Streptomyces sp. SPB74]
Length = 229
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 67/197 (34%), Gaps = 17/197 (8%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
L++ + ++ + ++ + + + V+ G G PS
Sbjct: 23 LWAVMALCVLALLPSAWIRVASGGAVRDEADVDPAPVAVVFGAGLR--------DGRPSP 74
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
R+ RLY + + + ++ GD + G E + L +GV + +
Sbjct: 75 YLAHRLDVAARLYAAGR-----VSAVLVTGDHGRAGYDEPTAMRDYLARAGVPGRQVVWD 129
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS-DYLNAY 210
DT+ + + + +LVS +H++R+ + G+ + + D +
Sbjct: 130 HAGFDTWDSCVRARRVFG---VDRAVLVSQGFHIRRAVALCRAAGVEAQGVAARDPRDVT 186
Query: 211 YSIIPLSANFYLTELAL 227
+ + AL
Sbjct: 187 WYYGASQEILAAPKAAL 203
>gi|218233505|ref|YP_002366978.1| hypothetical protein BCB4264_A2261 [Bacillus cereus B4264]
gi|218161462|gb|ACK61454.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 185
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 49 DRPSLSLQNRLDVALEYLFSHPE----AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDES 104
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 105 RILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 161
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 162 PIRSKR-----------KMYVREYAAIMK 179
>gi|170737710|ref|YP_001778970.1| hypothetical protein Bcenmc03_5353 [Burkholderia cenocepacia MC0-3]
gi|169819898|gb|ACA94480.1| protein of unknown function DUF218 [Burkholderia cenocepacia MC0-3]
Length = 230
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 66/178 (37%), Gaps = 20/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ V+ GN P +R+ +R Y++ + C + G
Sbjct: 50 PSDPADVAVIFGNALDD-------TGAPKPVLAARLDVGVRCYRAGQ-----CPAFLVSG 97
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
GL E+ + L+ GV D I ++ Q +T AQ + + + + +++VS
Sbjct: 98 AIDGPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLHAHRLSRVLIVSQ 157
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R++L F+ GI + + P + + +E + R
Sbjct: 158 YYHLARARLAFERVGIA--------RSNISAAYPRRFQWRDVYSSWREVPAYAVYAVR 207
>gi|146298194|ref|YP_001192785.1| hypothetical protein Fjoh_0430 [Flavobacterium johnsoniae UW101]
gi|146152612|gb|ABQ03466.1| protein of unknown function DUF218 [Flavobacterium johnsoniae
UW101]
Length = 219
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 75/218 (34%), Gaps = 29/218 (13%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+K F ++ ++ + I + + + + S + ++ ++ G G
Sbjct: 2 KKYFKIAFYLAIIGLIAVVTVNYWVKSSTET---KIYYSIKKLPKNDVGIIFGAGINGD- 57
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+PS R+ + L+K+ + + + + GD + E V N
Sbjct: 58 -------QPSKYLKDRLDAGIMLWKAKRINKILLS-----GDNGRDEYDELTVMKNYCYN 105
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV+ I ++ DT+ + + K K L+S YHL R+ I +
Sbjct: 106 QGVDTTKIFVDYAGFDTYSTMYRAKHIFK---IKKATLISQEYHLNRAVYIGNKLEIKSV 162
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ + +EY+ + +++
Sbjct: 163 GFSAN----------NGEYLGYKYVTFREYLSVFKSFF 190
>gi|84494933|ref|ZP_00994052.1| conserved membrane-associated protein (OmpA family protein)
[Janibacter sp. HTCC2649]
gi|84384426|gb|EAQ00306.1| conserved membrane-associated protein (OmpA family protein)
[Janibacter sp. HTCC2649]
Length = 226
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 61/176 (34%), Gaps = 23/176 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + ++LG G PS +R+ LY K +++
Sbjct: 46 ADAPETPVALVLGAGLQGG--------RPSPFLGARLDAAKELYDGGK-----VKVLLVS 92
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD + H E + L+ +GV + I L+ DT+ + Q + + + ++S
Sbjct: 93 GDNRTHAYDEPTAMRDYLVAAGVPTEAIVLDFAGRDTYDSCQRAHRIFGVDKVT---VIS 149
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
YH+ R+ + G+ T + P T +E + + A
Sbjct: 150 QGYHVGRAVALCRAAGMTTDGVG---DTSMRERYPREWWIGWT----REKLANIKA 198
>gi|324998768|ref|ZP_08119880.1| hypothetical protein PseP1_08384 [Pseudonocardia sp. P1]
Length = 346
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 32/236 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL + L V+ +L + L F+ + + + Y R
Sbjct: 114 LLIVVLLAVAVPVMLTGPVWLRALWILCALAAYFLAFQFVAFL-------GYARLYRWLV 166
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +V+LG+G P + RI M +++SGG
Sbjct: 167 RDRPADWVVVLGSGLHGSAVPPLL--------ADRIRAGMTELDR----RGARMLVLSGG 214
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILV 179
LAE ++ G + ++ ET S T QN + S +++ ++V
Sbjct: 215 KGDDERLAEGEAMRRWAVDHGADPALLRAETASRTTEQNLRLSDELVRGDPDPAGPGLIV 274
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+S YH+ R+ + + G++ +A+ + +A +Y L+E++ IL
Sbjct: 275 TSDYHVFRAAVLARRLGVDAQAAGA-----------PTAGYYWPSAVLREFVAILR 319
>gi|253730030|ref|ZP_04864195.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726243|gb|EES94972.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 171
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+ +R+ + +Y+ II+SGG ++E++ L+ GV++ DI
Sbjct: 11 VTPMLAARLDRALDIYQQQAS---ATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDI 67
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDY 206
+E+ S++T+ N +S +I N+ + + +V +S +H+ R+ Q G++ S
Sbjct: 68 LMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS-- 125
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
Y+ + + +K+Y+G++ Y
Sbjct: 126 HTPYHFFL---------HVLIKDYLGVMYQY 147
>gi|169794855|ref|YP_001712648.1| hypothetical protein ABAYE0681 [Acinetobacter baumannii AYE]
gi|215482402|ref|YP_002324584.1| hypothetical protein ABBFA_000666 [Acinetobacter baumannii
AB307-0294]
gi|301344954|ref|ZP_07225695.1| hypothetical protein AbauAB0_01897 [Acinetobacter baumannii AB056]
gi|301512264|ref|ZP_07237501.1| hypothetical protein AbauAB05_11802 [Acinetobacter baumannii AB058]
gi|301594344|ref|ZP_07239352.1| hypothetical protein AbauAB059_00995 [Acinetobacter baumannii
AB059]
gi|332853463|ref|ZP_08434782.1| hypothetical protein HMPREF0021_02365 [Acinetobacter baumannii
6013150]
gi|332870554|ref|ZP_08439296.1| hypothetical protein HMPREF0020_02948 [Acinetobacter baumannii
6013113]
gi|169147782|emb|CAM85645.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii AYE]
gi|213988119|gb|ACJ58418.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332728669|gb|EGJ60037.1| hypothetical protein HMPREF0021_02365 [Acinetobacter baumannii
6013150]
gi|332732114|gb|EGJ63383.1| hypothetical protein HMPREF0020_02948 [Acinetobacter baumannii
6013113]
Length = 261
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 80/245 (32%), Gaps = 30/245 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L + + FF + GW L+ L + + +
Sbjct: 36 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFNFIKENK 94
Query: 61 QWKKD---GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
++ I++LG+G +PS R+ + S Q +I
Sbjct: 95 DASQNLPAVKAIIVLGSGVENG--------QPSAILAKRLDTAAPVALSQPQ----AKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++GG +E++V + L + + +D + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKESEALVMSRYLEQHFHIAKDRMILEDKSTSTELNLKNSKPLLEQAHINAN 202
Query: 177 I---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+V+S +H R+ + G + L+EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRY----------NAWLREYFAY 252
Query: 234 LIAYY 238
+
Sbjct: 253 ASGWL 257
>gi|54309183|ref|YP_130203.1| putative SanA protein [Photobacterium profundum SS9]
gi|46913615|emb|CAG20401.1| Putative SanA protein [Photobacterium profundum SS9]
Length = 233
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 64/207 (30%), Gaps = 27/207 (13%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+L + ++ + + R +I ++LG I T+
Sbjct: 9 LFAVLCIILVSTSLLIDRWVSA--STSDRIFYDVSHIPSRSIGLVLGTSKYIAKTLNPYY 66
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
R+ + LYK K + + + GD E LL+SG+
Sbjct: 67 SY-------RMEAALELYKQGKIN-----VFLLSGDNAHRSYNEPWTMKRDLLKSGIPDS 114
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
DI L+ T + + + + +++ +H +R+ + I+
Sbjct: 115 DIVLDYAGFRTLDSVVRAKEVFEADHFV---IITQKFHCERALFIAESNNIDAICLAV-- 169
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGI 233
P F ++ L+E +
Sbjct: 170 --------PEPRGFAGFKIRLREVLAR 188
>gi|189467152|ref|ZP_03015937.1| hypothetical protein BACINT_03536 [Bacteroides intestinalis DSM
17393]
gi|189435416|gb|EDV04401.1| hypothetical protein BACINT_03536 [Bacteroides intestinalis DSM
17393]
Length = 220
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 68/225 (30%), Gaps = 26/225 (11%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + S + ++H ++ + +
Sbjct: 4 LIKSSKWARRIKWSILTGTILIFAVIVCANYAVRHTAKAFIYQNIDSIPQNKA------- 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + + P+ +RI T+ LYK+ K +++ GD + G E
Sbjct: 57 -GLLLGTSKLLRSGLPNQYFQNRIQATVDLYKAGKIE-----VVVISGDNSRKGYNEPED 110
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
++L+ G+ D I L+ T + + ++S +H +R+
Sbjct: 111 MKSELMLRGIPEDKIYLDYAGFRTLDSVVRMEKIFGQKSFT---IISQKFHNQRAIYIAH 167
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G+ ++ +NAY L+E + +
Sbjct: 168 AKGLQVVGYNAEDVNAYSGFKTQ----------LREKFARVKLFL 202
>gi|269102596|ref|ZP_06155293.1| putative SanA protein [Photobacterium damselae subsp. damselae CIP
102761]
gi|268162494|gb|EEZ40990.1| putative SanA protein [Photobacterium damselae subsp. damselae CIP
102761]
Length = 224
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 70/218 (32%), Gaps = 28/218 (12%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+R IF + + ++ + R ++ ++LG I
Sbjct: 2 KLRNIFPAFAVLCIIFVGSLLLVNRWVSAETSNQIYR---DISQIPSRSVGLVLGTSKYI 58
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
T+ RI + LYK K + + + GD + E L
Sbjct: 59 AKTLNPYYEY-------RIQAALELYKQDKIN-----VFLLSGDNRHRSYNEPWTMKRDL 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L++GV ++I L+ T + + + + +++ +H +R+ Q+ I+
Sbjct: 107 LKAGVPDNEIVLDYAGFRTLDSIVRAKKVFEANHFV---IITQKFHCERALFIAQNKNID 163
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
P +L ++E + + A
Sbjct: 164 AICLAV----------PEPKGMAGLKLRIREVLARVKA 191
>gi|256843883|ref|ZP_05549370.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|312984074|ref|ZP_07791422.1| putative membrane protein [Lactobacillus crispatus CTV-05]
gi|256613788|gb|EEU18990.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|310894576|gb|EFQ43650.1| putative membrane protein [Lactobacillus crispatus CTV-05]
Length = 367
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 84/237 (35%), Gaps = 28/237 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ I I+ R + + + ++ L+ L +
Sbjct: 121 LALIISIIVLLGPGKYLPRWLSLALASIPAIAIYLGLVLYNFLVNLLLYQIYPRTYHQ-- 178
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI-IISGG 121
+ +++LG+G + S +RI ++ Q I I+SGG
Sbjct: 179 ----DYLIVLGSGLINGD-------QVSKLLAARINRAIQYSNRQYQKGRKRPILIMSGG 227
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
++E++ + GV D I LE QS +T++N FS + G +
Sbjct: 228 QGADEKISEALAMSRFAQRRGVSVDRILLEDQSKNTYENMLFSKRIATKDFGNSHFRARF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 288 FSNNYHIFRAALLAKEVGLKANGVGAY-----------TRFYYLPNAIIREFAGVFV 333
>gi|172063895|ref|YP_001811546.1| hypothetical protein BamMC406_4882 [Burkholderia ambifaria MC40-6]
gi|171996412|gb|ACB67330.1| protein of unknown function DUF218 [Burkholderia ambifaria MC40-6]
Length = 219
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 80/224 (35%), Gaps = 28/224 (12%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ Q +++ +L +F I+ ++L + ++ V+ GN
Sbjct: 1 MKQRLKRGCMARIGRVLAAFACLWIVAAVVLVGAGMRMPS--------EPADVAVIFGNA 52
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P +R+ +R Y+ + C + G GL E+
Sbjct: 53 LDDH-------GAPKPVLAARLDVGVRCYREGQ-----CPAFLVSGAIDGPGLNEATAMR 100
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ L+ GV + I ++ Q +T AQ + + ++ + ++++S YHL R++L F+
Sbjct: 101 DYLVARGVPAERIAVDDQGDNTLATAQHTRAYLQAHRLSRVLIISQYYHLARARLAFERV 160
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
GI + Y P + +E + R
Sbjct: 161 GIAGANISAAY--------PHHFQLRDIYSSWREVPAYAVYVLR 196
>gi|184159372|ref|YP_001847711.1| hypothetical protein ACICU_03052 [Acinetobacter baumannii ACICU]
gi|332876210|ref|ZP_08443987.1| hypothetical protein HMPREF0022_03636 [Acinetobacter baumannii
6014059]
gi|183210966|gb|ACC58364.1| uncharacterized conserved protein [Acinetobacter baumannii ACICU]
gi|322509284|gb|ADX04738.1| putative membrane protein [Acinetobacter baumannii 1656-2]
gi|323519312|gb|ADX93693.1| hypothetical protein ABTW07_3273 [Acinetobacter baumannii
TCDC-AB0715]
gi|332735605|gb|EGJ66655.1| hypothetical protein HMPREF0022_03636 [Acinetobacter baumannii
6014059]
Length = 261
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 79/245 (32%), Gaps = 30/245 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L + + FF + GW L+ L + + +
Sbjct: 36 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFNFIKENK 94
Query: 61 QWKKD---GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
++ I++LG+G +PS R+ + S Q +I
Sbjct: 95 DASQNLPAVKAIIVLGSGVENG--------QPSAILAKRLDTAAPVALSQPQ----AKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++GG E++V + L + + +D + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKEPEALVMSRYLEQHFHIAKDRMILEDKSTSTELNLKNSKPLLEQAHINVN 202
Query: 177 I---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+V+S +H R+ + G + L+EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRY----------NAWLREYFAY 252
Query: 234 LIAYY 238
+
Sbjct: 253 ASGWL 257
>gi|260589199|ref|ZP_05855112.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
gi|260540280|gb|EEX20849.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
Length = 250
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 94/270 (34%), Gaps = 55/270 (20%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGII--PTILLKHLQFSY------- 53
+ ++ VS + L R S F L++ +G G + + ++
Sbjct: 4 ICFLLGFVSVLYFLGI-WRMTGLSSKFPLVWLLLGSGFFLAGSFIYFGIEIPVWFSGLIG 62
Query: 54 ----------------QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + K+ + IV+LG +++ RI
Sbjct: 63 IFLGGFLLLLVFSECLIISAMRQKEVKNLDYIVVLGAQVRGNVPSKSLQY--------RI 114
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ + + +++SGG + G++E+ +L G+ + + LE +S +T
Sbjct: 115 DRA----EKYLKENKKTKVVLSGGKGEDEGISEAQCMAEELGRKGIAFNRLLLEKKSRNT 170
Query: 158 FQNAQFSSSMIKNMQGKN-----IILVSSAYHLKRSQLYF-QHFGINTKASCSDYLNAYY 211
QN F+ +I+ K+ I +V++ +H+ R + +
Sbjct: 171 EQNITFTIPIIQQDSKKDLKELKIGIVTNGFHIYRGSGIAQKKMQCKVYGIAA------- 223
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ F L+E+ G++ GN
Sbjct: 224 ----KNSRFLQVNYLLREFFGVMKDRLLGN 249
>gi|254975478|ref|ZP_05271950.1| hypothetical protein CdifQC_09212 [Clostridium difficile QCD-66c26]
gi|255092865|ref|ZP_05322343.1| hypothetical protein CdifC_09464 [Clostridium difficile CIP 107932]
gi|255314608|ref|ZP_05356191.1| hypothetical protein CdifQCD-7_09675 [Clostridium difficile
QCD-76w55]
gi|255517281|ref|ZP_05384957.1| hypothetical protein CdifQCD-_09254 [Clostridium difficile
QCD-97b34]
gi|255650388|ref|ZP_05397290.1| hypothetical protein CdifQCD_09414 [Clostridium difficile
QCD-37x79]
gi|260683502|ref|YP_003214787.1| hypothetical protein CD196_1762 [Clostridium difficile CD196]
gi|260687098|ref|YP_003218231.1| hypothetical protein CDR20291_1737 [Clostridium difficile R20291]
gi|306520344|ref|ZP_07406691.1| hypothetical protein CdifQ_10684 [Clostridium difficile QCD-32g58]
gi|260209665|emb|CBA63373.1| putative membrane protein [Clostridium difficile CD196]
gi|260213114|emb|CBE04521.1| putative membrane protein [Clostridium difficile R20291]
Length = 248
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 92/239 (38%), Gaps = 35/239 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ I LI+ +K+F+ +++ F+ ++ L+
Sbjct: 34 LVVGIVLIIYQIFKKKIKEKKVFYRVLKIIISIFLIVFVVTESLI--------IFYPKNS 85
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LG + PS R+ + + + +C +++SGG
Sbjct: 86 LESKSDYLLILGASVK--------KTTPSTTLKGRLDTAL----KYLKINDNCYVVVSGG 133
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKNI 176
+ E+ + L+++ ++++ I E +S +T++N ++S I+ +
Sbjct: 134 KGSGEKITEAKAMKDYLIKNSIDKNRIIEEDKSTNTYENFKYSKLKIEEHSQRKLSDLKV 193
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+V++ +H+ RS++ G + + + S +P +E+ +
Sbjct: 194 KIVTTDFHVLRSKILAYRNGYKNTSFYAS--KSKLSFVPTYYT--------REFFALWK 242
>gi|258514186|ref|YP_003190408.1| hypothetical protein Dtox_0889 [Desulfotomaculum acetoxidans DSM
771]
gi|257777891|gb|ACV61785.1| protein of unknown function DUF218 [Desulfotomaculum acetoxidans
DSM 771]
Length = 236
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 24/180 (13%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
R + + + I++LG S R+ LY+ K
Sbjct: 45 SRYITNENDVPKSDAILILGAYVYPN-------GIVSTMLNDRLTVGFELYQRGKAAK-- 95
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I GD K E L++ G +D+ ++ T+++ + + +
Sbjct: 96 ---LIVSGDHGKFSYDEVNAMKKFLIDKGARNEDVFMDHAGFSTYESLYRARDIFQAKNI 152
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I+V+ YHL R+ + G+ +D + + + L+E
Sbjct: 153 ---IIVTQQYHLLRAVFIARELGLKAYGVAADRQD---------YGIVMEKYKLREIAAR 200
>gi|42781376|ref|NP_978623.1| hypothetical protein BCE_2312 [Bacillus cereus ATCC 10987]
gi|229196506|ref|ZP_04323250.1| hypothetical protein bcere0001_20640 [Bacillus cereus m1293]
gi|42737298|gb|AAS41231.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|228586862|gb|EEK44936.1| hypothetical protein bcere0001_20640 [Bacillus cereus m1293]
Length = 185
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 49 DRPSLSLQNRLDVALEYLVSHPE----AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDES 104
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 105 RILIEDQSTNTYENLKFSIDLYDVKH---AVVVSNTYHLYRTKIIAKRLGMRMEALAAET 161
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 162 PMRSKR-----------KMYVREYAAIMK 179
>gi|261401556|ref|ZP_05987681.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
gi|269208394|gb|EEZ74849.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
Length = 218
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 79/229 (34%), Gaps = 20/229 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L F + + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAV----YRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q II +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIIFTGGRSKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ G+ +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGIPPRNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
G+ S + I L + L+ L+++ G +
Sbjct: 168 DLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGGRFWGWL 216
>gi|205374987|ref|ZP_03227778.1| hypothetical protein Bcoam_18347 [Bacillus coahuilensis m4-4]
Length = 200
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 31/215 (14%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
LF F+ ++ IL L L+ ++I++L G
Sbjct: 12 VWFLFIFVMVLVLAMIL---LFKRSHTLLVEKNPPVPADVILVLSGGAQG---------- 58
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
R E +LY TI++S + + L+ GV + I
Sbjct: 59 ------EREAEAAKLYHEG----YTDTIVVSMAKVGWNTYT-GDIMREHLIHLGVPDNAI 107
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF----GINTKASCS 204
T + A+ + +++ + + +IL +S++H R++ F+ GI +
Sbjct: 108 LTYGDVTSTREEAEQAVPLLEELAVRKMILTTSSFHSGRAKWIFERTLKEKGIEVISVPV 167
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ E + + ++R
Sbjct: 168 REEEFGSDW---WQTHETRKQGASELLKYVWEWFR 199
>gi|227878426|ref|ZP_03996366.1| integral membrane protein [Lactobacillus crispatus JV-V01]
gi|256849554|ref|ZP_05554986.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262046222|ref|ZP_06019185.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
gi|227861955|gb|EEJ69534.1| integral membrane protein [Lactobacillus crispatus JV-V01]
gi|256713670|gb|EEU28659.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260573552|gb|EEX30109.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
Length = 361
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 84/237 (35%), Gaps = 28/237 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ I I+ R + + + ++ L+ L +
Sbjct: 121 LALIISIIVLLGPGKYLPRWLSLALASIPAIAIYLGLVLYNFLVNLLLYQIYPRTYHQ-- 178
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI-IISGG 121
+ +++LG+G + S +RI ++ Q I I+SGG
Sbjct: 179 ----DYLIVLGSGLINGD-------QVSKLLAARINRAIQYSNRQYQKGRKRPILIMSGG 227
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
++E++ + GV D I LE QS +T++N FS + G +
Sbjct: 228 QGADEKISEALAMSRFAQRRGVSVDRILLEDQSKNTYENMLFSKRIATKDFGNSHFRARF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 288 FSNNYHIFRAALLAKEVGLKANGVGAY-----------TRFYYLPNAIIREFAGVFV 333
>gi|227529308|ref|ZP_03959357.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
gi|227350736|gb|EEJ41027.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
Length = 315
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 94/240 (39%), Gaps = 28/240 (11%)
Query: 3 LSWIFL-IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+FL + LL + + + ++L + I GI L+
Sbjct: 84 FGLMFLNLFICLPLLFKYQGYFTWFNHQVILTALIVNGITTLGLVIFWGA--IITAQLLS 141
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ ++ LG G P + ++ +C + + + TII++GG
Sbjct: 142 RPVKADYLIALGAGLRQGKVPPV------------LTARLQQAIACWKLNHNATIIVTGG 189
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-- 179
L+E+ L+ G+ +D I LE Q+++T+ N + +++ +V
Sbjct: 190 ILHGEQLSEAQAMAKYLINHGIPQDRIILEEQAMNTWDNLRNCQRLLQKQADPKQKIVVI 249
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+S++H+ R+ Y + ++ + + PL+ +++Y+GI+ +YR
Sbjct: 250 TSSFHIFRTFNYLRKLKLS---WPLVSSKTPWKLQPLT--------VVRDYLGIIRDHYR 298
>gi|91226499|ref|ZP_01261248.1| SanA protein [Vibrio alginolyticus 12G01]
gi|91189131|gb|EAS75412.1| SanA protein [Vibrio alginolyticus 12G01]
Length = 224
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 66/214 (30%), Gaps = 27/214 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ L + I ++ + + + + V+LG I
Sbjct: 1 MILSISALSLLVSVIAIDRWVVLQAK---ESIFTEYEQIPQHEVAVVLGTSKYIGKI--- 54
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ RI + LY K + GD E LL++GV
Sbjct: 55 ----LNTYYTHRINAAIELYNQGKVKQFLLS-----GDNAHRSYNEPWTMKRDLLKAGVP 105
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I L+ T + + + + + ++V+ +H +R+ + I+ +
Sbjct: 106 EEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFHCERALFIADAYSIDAQCLAV 162
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
A N T + ++E + + A+
Sbjct: 163 AGPTA---------NKQKTSMRVRELLARVKAFL 187
>gi|253568622|ref|ZP_04846033.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251842695|gb|EES70775.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 214
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 74/219 (33%), Gaps = 27/219 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+K+F+++ + + I I +K + N+ +LLG + +
Sbjct: 2 KKKLFYITLIIAILCVISI-FICDWTIKK--NAASCIYTEISDIPANNVGLLLGTSSKLK 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + RI + LYK+ K + I+ GD +K E L+
Sbjct: 59 SGNNNLYFDY------RIDAAVELYKAGKINY-----ILISGDNRKEDYNEPEEMKKALM 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV I L+ T + + + + ++S +H +R+ + GI
Sbjct: 108 QKGVPEKSIYLDYAGFRTLDSVVRAKEVFGQ---TRLTIISQRFHNERAIYLAEKNGITA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ ++ Y + ++E + +
Sbjct: 165 IGFNARDVDVYAGLKTN----------IRELFARVKMFI 193
>gi|126699451|ref|YP_001088348.1| hypothetical protein CD1842 [Clostridium difficile 630]
gi|255101014|ref|ZP_05329991.1| hypothetical protein CdifQCD-6_09404 [Clostridium difficile
QCD-63q42]
gi|255306869|ref|ZP_05351040.1| hypothetical protein CdifA_09792 [Clostridium difficile ATCC 43255]
gi|115250888|emb|CAJ68713.1| conserved hypothetical protein, DUF218 family [Clostridium
difficile]
Length = 248
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 93/239 (38%), Gaps = 35/239 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ I LI+ +K+F+ +++ F+ ++ L+
Sbjct: 34 LVVGIVLIIYQIFKKKIKEKKVFYRVLKIIISIFLIVFVVTESLI--------IFYPKNS 85
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LG + PS R+ + + + +C +++SGG
Sbjct: 86 LESKSDYLLILGASVK--------KTTPSTTLKGRLDTAL----KYLKINDNCYVVVSGG 133
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKNI 176
+ E+ + L+++G++++ I E +S +T++N ++S I+ +
Sbjct: 134 KGSGEKITEAKAMKDYLIKNGIDKNRIIEEDKSTNTYENFKYSKLKIEEHSQRKLSDLKV 193
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+V++ +H+ RS++ G + + + S +P +E+ +
Sbjct: 194 KIVTTDFHVLRSKILAYRNGYKNTSFYAS--KSKLSFVPTYYT--------REFFALWK 242
>gi|302333991|gb|ADL24184.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 171
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+ +R+ + +Y+ II+SGG + E++ L+ GV++ DI
Sbjct: 11 VTPMLAARLDRALDIYQQQAS---ATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDI 67
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDY 206
+E+ S++T+ N +S +I N+ + + +V +S +H+ R+ Q G++ S
Sbjct: 68 LMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS-- 125
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
Y+ + + +K+Y+G++ Y
Sbjct: 126 HTPYHFFL---------HVLIKDYLGVMYQY 147
>gi|224477345|ref|YP_002634951.1| hypothetical protein Sca_1860 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421952|emb|CAL28766.1| hypothetical protein SCA_1860 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 329
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 93/237 (39%), Gaps = 31/237 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+F++ ++LL L + + L+ +L S+ ++ K
Sbjct: 93 VFILAYGFYLLSWLPVLFLNGLFLWLCWIAVSTLF---ALIHYL--SWSSTYSMIEFTKP 147
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
N+I++LG G + R+ + LY + +Q II+SGG +
Sbjct: 148 TNLIIVLGAGLYREKVTQML--------AWRLDRAVALYFAQEQPVY---IIVSGGKGEG 196
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNIILVSSA 182
++E+ L+E + + I +E +S T++N + ++ + + +N+ +V+S
Sbjct: 197 EHVSEAEAMKAYLIEEHIPENHILMEDESHSTYENLANTKQILHDRLAFRPENMTIVTSQ 256
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI-AYY 238
+H+ R+ + Q I S A++ +++++ ++
Sbjct: 257 FHILRALRFAQILKIKASGISSRTPYAFFD-----------TALIRDFLALMYCYKL 302
>gi|312622108|ref|YP_004023721.1| hypothetical protein Calkro_1031 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202575|gb|ADQ45902.1| protein of unknown function DUF218 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 195
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 71/217 (32%), Gaps = 26/217 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ KI + +++ F + K + I++LG
Sbjct: 2 RRFLKILLCTLVIVILIFAVT------------EASIIIFGISAKPKKSDCIIVLGCAVY 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS R+ LYK I++ G ++E+
Sbjct: 50 GD--------FPSPFFRERLNRAFELYKKGYARY----IVVCGAKGPGENISEAEAGKRY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+E GV + E +S T++N + ++ K+ I+VS+ +HL+R+ L + I
Sbjct: 98 LVEMGVLPKFVLKEDKSFSTYENLLHAKRVMNKKGFKSAIIVSNMFHLERAHLIAKKLKI 157
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
N+ S + + E + L
Sbjct: 158 NSSFSGVYVKQYLHEEY--YGFMRESVAVWYEILKTL 192
>gi|315659410|ref|ZP_07912273.1| membrane protein [Staphylococcus lugdunensis M23590]
gi|315495529|gb|EFU83861.1| membrane protein [Staphylococcus lugdunensis M23590]
Length = 334
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 94/237 (39%), Gaps = 30/237 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L +F + + + ++ ++ F G I+ LL +
Sbjct: 102 VILIALFPVSFIVNNDVSKYIFVTYLFTTLIFTYFFG-LILSCWLLA-------IFYSTL 153
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K +I ++LG+G P + SRI + +Y KQ++ ++SG
Sbjct: 154 NSNKSIDIFLVLGSGLINNKVTPLL--------ASRIDAGLEIY--QKQNNKQHLFLVSG 203
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL-- 178
G ES+ L++ G+ D+I E QS T++N FS MI+N+ +
Sbjct: 204 GQGDDELRPESVAMKEYLVDKGIVEDEIICEQQSKTTYENLYFSKEMIENLPLNKPNILI 263
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +H+ R+ + +YS+ + +++ T ++E + I+
Sbjct: 264 CTNDFHILRAMFLAKKLHFK----------NFYSVGGKTKSYFFTNAFIREVVAIIK 310
>gi|269793790|ref|YP_003313245.1| hypothetical protein Sked_04460 [Sanguibacter keddieii DSM 10542]
gi|269095975|gb|ACZ20411.1| uncharacterized membrane protein [Sanguibacter keddieii DSM 10542]
Length = 216
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 60/182 (32%), Gaps = 21/182 (11%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ L + ++ +Q + + + ++LG
Sbjct: 2 RVGVGVVAGLTLLAVAGPVV------FVQARAADHMYTADDVPATPVALVLGARVYDD-- 53
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS +R+ + LY + +++ GD + E L+E
Sbjct: 54 -----GTPSQFLRARLDLAVELYGAGSVE-----VLLVPGDGRPDHNDEPAAMRRYLVEQ 103
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + I ++ DT+ + + + + +V+ ++HL R+ + G++
Sbjct: 104 GVPAEAIIQDSAGFDTYDSCVRADKVYG---VGALTVVTQSFHLARAVTTCRAVGVDAVG 160
Query: 202 SC 203
Sbjct: 161 VG 162
>gi|315151722|gb|EFT95738.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
Length = 193
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKENALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N ++ L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITAASSFPKDIKNFGRELLSLGYAL 189
>gi|300769543|ref|ZP_07079429.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300492958|gb|EFK28140.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 361
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 52/244 (21%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK------IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
ML ++ L + L + +F++ F L F L + +
Sbjct: 112 MLTLYLGLAILILPFLGNLLSSHVPQPVSYFLTVFPNLVIFYLGFWFYNYLTMLTIYQFN 171
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMH 113
P L + I++LG G S RI +R Y+ ++
Sbjct: 172 WPRL------RQDYIIVLGAGLLDGD-------RVSPLLGQRIMRGLRFYQKQQRKTHHR 218
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I SGG + E + G+ D ETQS T QN QFS +I
Sbjct: 219 AVMIFSGGQGGDETVPEGQAMLEYAIAHGLPATDGWAETQSKTTLQNMQFSKQLIAQGPV 278
Query: 174 KNII--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
KN V++ YH R+ ++ + G+ + +A F+L + ++EYI
Sbjct: 279 KNPRTIFVTNNYHTFRAGMFAKQAGLKADGIGA-----------RTARFFLPDAIIREYI 327
Query: 232 GILI 235
I +
Sbjct: 328 AIFV 331
>gi|229544814|ref|ZP_04433539.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
gi|256854151|ref|ZP_05559516.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|229310086|gb|EEN76073.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
gi|256711094|gb|EEU26137.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|315030796|gb|EFT42728.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
Length = 193
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + +V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLFSFKRLV---IVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N ++ L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITAASSFPKDIKNFGRELLSLGYAL 189
>gi|107025790|ref|YP_623301.1| hypothetical protein Bcen_3433 [Burkholderia cenocepacia AU 1054]
gi|116693029|ref|YP_838562.1| hypothetical protein Bcen2424_4935 [Burkholderia cenocepacia
HI2424]
gi|105895164|gb|ABF78328.1| protein of unknown function DUF218 [Burkholderia cenocepacia AU
1054]
gi|116651029|gb|ABK11669.1| protein of unknown function DUF218 [Burkholderia cenocepacia
HI2424]
Length = 230
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 66/178 (37%), Gaps = 20/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ V+ GN P +R+ +R Y++ + C + G
Sbjct: 50 PSNPADVAVIFGNALDD-------TGAPKPVLAARLDVGVRCYRAGQ-----CPAFLVSG 97
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
GL E+ + L+ GV D I ++ Q +T AQ + + + + +++VS
Sbjct: 98 AIDGPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLHAHRLSRVLIVSQ 157
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R++L F+ GI + + P + + +E + R
Sbjct: 158 YYHLARARLAFERVGIA--------RSNISAAYPRRFQWRDVYSSWREVPAYAVYAVR 207
>gi|257421586|ref|ZP_05598576.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|257163410|gb|EEU93370.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|315156481|gb|EFU00498.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
Length = 193
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N ++ L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITVASSFPKDIKNFGRELLSLGYAL 189
>gi|220908126|ref|YP_002483437.1| hypothetical protein Cyan7425_2730 [Cyanothece sp. PCC 7425]
gi|219864737|gb|ACL45076.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 279
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 80/224 (35%), Gaps = 37/224 (16%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + + +++ + I L +L L + IV+LG G
Sbjct: 65 FRWKQPLIKGTIALVVLALIATFPPVVTLANYLL----VSPLPQDTGARVDAIVVLGRG- 119
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
S R L+++ + + + G ++
Sbjct: 120 --------------PISGDRAAVAAELWQAGRAPKVFVS-----------GRGDAPYLVK 154
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+L + GV + E S T +NAQF++ +++ ++I+L++ + H+ RS + F+ G
Sbjct: 155 ELRKYGVSASALASEDCSQTTEENAQFTARLLQPQGVQHILLITDSPHMLRSWMTFERVG 214
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ NA + + +EY G++ +G
Sbjct: 215 FQVIP----HGNALPHWLSHRKHALTVY---REYAGLISYTLQG 251
>gi|58338180|ref|YP_194765.1| hypothetical protein LBA1938 [Lactobacillus acidophilus NCFM]
gi|58255497|gb|AAV43734.1| hypothetical protein LBA1938 [Lactobacillus acidophilus NCFM]
Length = 367
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 80/237 (33%), Gaps = 28/237 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ IF ++ + + + + ++ L+ L +
Sbjct: 121 IALIFSVIFILGPGRYLPHWLSALLASIPAIAIYLGLVLYNFLVNLLLYQ------IYPR 174
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +++LG G + S +RI ++ Q III G
Sbjct: 175 HYKQDYLIVLGAGLINGD-------QVSKLLAARINRAIQFSNRQYQKGRKRPIIIMSGG 227
Query: 123 P-QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
+ E++ GV D I +E QS +T+QN FS + N G
Sbjct: 228 QGPDEKVPEALAMAKFAQHRGVSPDHILIEDQSKNTYQNMLFSKQLATNDFGGPNFKATF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 288 FSNNYHIFRAALLAKEVGLKANGVGAF-----------TRLYYLPNAIIREFAGVFV 333
>gi|169349813|ref|ZP_02866751.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
gi|169293381|gb|EDS75514.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
Length = 196
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 78/215 (36%), Gaps = 28/215 (13%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ + CF+L+ I + + Q + + ++ G
Sbjct: 10 YVVLCFVLINVLIFITVF-------------KKTQKRQKQSKYDCAIVCG-------FPA 49
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS SR+ + + LY K II G + E+ + + G+
Sbjct: 50 NSDGSPSLIMKSRVEKAIELYCHNKIDY-----IIFSGGKVHNTYEEAAIMEKYAISLGL 104
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
++ I E +++ TF N + + ++ + ++V++ +HL+++ Y + +N
Sbjct: 105 DKKIIIKENKAISTFHNLLYCTEIMNEHNFNSCLVVTNGWHLRKANHYARKNKLNYAMVV 164
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+D + + + L + YI + YY
Sbjct: 165 ADNPSEFNKLKILYLYLKTNLIM---YINLFKGYY 196
>gi|159899964|ref|YP_001546211.1| hypothetical protein Haur_3447 [Herpetosiphon aurantiacus ATCC
23779]
gi|159893003|gb|ABX06083.1| protein of unknown function DUF218 [Herpetosiphon aurantiacus ATCC
23779]
Length = 233
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 27/192 (14%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+ + P + ++ G G +PS R+ ++LY+
Sbjct: 34 WATADYRFADVASIPSQP----VAIVFGAGIRYN--------QPSAALRERLDGAIQLYQ 81
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+ + ++ GD + E V + + G+ I + T++ +
Sbjct: 82 AGRVQH-----LLMSGDNSQTNYDEVSVMRDYAIAHGIPASAITRDYAGFSTYETCYRAK 136
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFY 221
++ Q ILV+ YHL R+ + G+ N + P +
Sbjct: 137 AIFGVNQ---AILVTQDYHLPRAIYTCRELGVAAIGLSIPDWNFKPEQSTTYYPPATQIR 193
Query: 222 LTELALKEYIGI 233
T +E++
Sbjct: 194 YTT---REWLAR 202
>gi|254250125|ref|ZP_04943445.1| hypothetical protein BCPG_05008 [Burkholderia cenocepacia PC184]
gi|124876626|gb|EAY66616.1| hypothetical protein BCPG_05008 [Burkholderia cenocepacia PC184]
Length = 204
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 20/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ V+ GN P +R+ +R Y + + C + G
Sbjct: 24 PSDPADVAVIFGNALDD-------TGAPKPVLAARLDVGVRCYHAGQ-----CPAFLVSG 71
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
GL E+ + L+ GV D I ++ Q +T AQ + + + + +++VS
Sbjct: 72 AIDGPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLHAHRLSRVLIVSQ 131
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R++L F+ GI + + P + + +E + R
Sbjct: 132 YYHLARARLAFERVGIA--------RSNISAAYPRRFQWRDVYSSWREVPAYAVYAVR 181
>gi|29377330|ref|NP_816484.1| hypothetical protein EF2862 [Enterococcus faecalis V583]
gi|227554286|ref|ZP_03984333.1| conserved hypothetical protein [Enterococcus faecalis HH22]
gi|229549029|ref|ZP_04437754.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
gi|255974796|ref|ZP_05425382.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256960950|ref|ZP_05565121.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256963911|ref|ZP_05568082.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|257079971|ref|ZP_05574332.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|257081584|ref|ZP_05575945.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257087767|ref|ZP_05582128.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257091087|ref|ZP_05585448.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|293382461|ref|ZP_06628396.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|293387155|ref|ZP_06631716.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|294779524|ref|ZP_06744919.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|307268328|ref|ZP_07549709.1| hypothetical protein HMPREF9498_00468 [Enterococcus faecalis
TX4248]
gi|307272101|ref|ZP_07553364.1| hypothetical protein HMPREF9514_00848 [Enterococcus faecalis
TX0855]
gi|307280587|ref|ZP_07561635.1| hypothetical protein HMPREF9515_01629 [Enterococcus faecalis
TX0860]
gi|307286850|ref|ZP_07566932.1| hypothetical protein HMPREF9505_00382 [Enterococcus faecalis
TX0109]
gi|312901401|ref|ZP_07760678.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312904386|ref|ZP_07763547.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|312906516|ref|ZP_07765518.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312910460|ref|ZP_07769306.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|29344797|gb|AAO82554.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227176576|gb|EEI57548.1| conserved hypothetical protein [Enterococcus faecalis HH22]
gi|229305822|gb|EEN71818.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
gi|255967668|gb|EET98290.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256951446|gb|EEU68078.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256954407|gb|EEU71039.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256988001|gb|EEU75303.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256989614|gb|EEU76916.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256995797|gb|EEU83099.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|256999899|gb|EEU86419.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|291080145|gb|EFE17509.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|291083426|gb|EFE20389.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|294453403|gb|EFG21810.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|306502065|gb|EFM71351.1| hypothetical protein HMPREF9505_00382 [Enterococcus faecalis
TX0109]
gi|306503953|gb|EFM73170.1| hypothetical protein HMPREF9515_01629 [Enterococcus faecalis
TX0860]
gi|306511217|gb|EFM80224.1| hypothetical protein HMPREF9514_00848 [Enterococcus faecalis
TX0855]
gi|306515354|gb|EFM83888.1| hypothetical protein HMPREF9498_00468 [Enterococcus faecalis
TX4248]
gi|310627459|gb|EFQ10742.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310632285|gb|EFQ15568.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|311289232|gb|EFQ67788.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311291477|gb|EFQ70033.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315026569|gb|EFT38501.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315148855|gb|EFT92871.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315162808|gb|EFU06825.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
gi|315166292|gb|EFU10309.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
gi|315169149|gb|EFU13166.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
gi|315171876|gb|EFU15893.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315575243|gb|EFU87434.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315576853|gb|EFU89044.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
gi|315582397|gb|EFU94588.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|327536019|gb|AEA94853.1| hypothetical protein OG1RF_12166 [Enterococcus faecalis OG1RF]
gi|329577167|gb|EGG58637.1| hypothetical protein HMPREF9520_00991 [Enterococcus faecalis
TX1467]
Length = 193
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N ++ L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITAASSFPKDIKNFGRELLSLGYAL 189
>gi|289549962|ref|YP_003470866.1| hypothetical protein SLGD_00591 [Staphylococcus lugdunensis
HKU09-01]
gi|289179494|gb|ADC86739.1| hypothetical protein SLGD_00591 [Staphylococcus lugdunensis
HKU09-01]
Length = 334
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 94/237 (39%), Gaps = 30/237 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L +F + + + ++ ++ F G I+ LL +
Sbjct: 102 VILIALFPVSFIVNNDVSKYIFVTYLFTTLIFTYFFG-LILSCWLLA-------IFYSTL 153
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K +I ++LG+G P + SRI + +Y KQ++ ++SG
Sbjct: 154 NSNKSIDIFLVLGSGLINNKVTPLL--------ASRINAGLEIY--QKQNNKQHLFLVSG 203
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL-- 178
G ES+ L++ G+ D+I E QS T++N FS MI+N+ +
Sbjct: 204 GQGDDELRPESVAMKEYLVDKGIVEDEIICEQQSKTTYENLYFSKKMIENLPLNKPNILI 263
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +H+ R+ + +YS+ + +++ T ++E I I+
Sbjct: 264 CTNDFHILRAMFLAKKLHFK----------NFYSVGSKTKSYFFTNAFIREVIAIIK 310
>gi|193078251|gb|ABO13211.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
Length = 261
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 30/245 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L + + FF + GW L+ L + + +
Sbjct: 36 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFNFIKENK 94
Query: 61 QWKKD---GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
++ I++LG+G EPS R+ + S Q +I
Sbjct: 95 DASQNLPAVKAIIVLGSGVENG--------EPSAILAKRLDTAAPVALSQPQ----AKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++GG E++V + L + + +D + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTELNLKNSKPLLEQAHISVN 202
Query: 177 I---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+V+S +H R+ + G + L+EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRY----------NAWLREYFAY 252
Query: 234 LIAYY 238
+
Sbjct: 253 ASGWL 257
>gi|169632529|ref|YP_001706265.1| hypothetical protein ABSDF0656 [Acinetobacter baumannii SDF]
gi|169151321|emb|CAP00033.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii]
Length = 261
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 79/245 (32%), Gaps = 30/245 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L + + FF + GW L+ L + + +
Sbjct: 36 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWFCFWIWLI-GLGYFFNFIKENK 94
Query: 61 QWKKD---GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
++ I++LG+G +PS R+ + S Q +I
Sbjct: 95 DASQNLPAVKAIIVLGSGVENG--------QPSAILAKRLDTAAPVALSQPQ----AKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++GG E++V + L + + +D + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTELNLKNSKPLLEQAHINVN 202
Query: 177 I---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+V+S +H R+ + G + L+EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRY----------NAWLREYFAY 252
Query: 234 LIAYY 238
+
Sbjct: 253 ASGWL 257
>gi|323467478|gb|ADX71165.1| Integral membrane protein [Lactobacillus helveticus H10]
Length = 374
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 90/242 (37%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLC---QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
++ ++ LI+S L R + + + + ++ L+ L +
Sbjct: 123 LIFGFVALILSLMFLFGPGQYLPRWLSVLLASIPAIAIYLGLVLYNFLINLLLYQ----- 177
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTI 116
+ + +++LG G S +RI ++ + ++ I
Sbjct: 178 -IYPRRYKQDYLIVLGAGLINGD-------RVSKLLAARINRAIQYSNRQYQKGRKRPII 229
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
IISGG + E++ + G++ + + +E +S +T+QN FS + G +
Sbjct: 230 IISGGQGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSN 289
Query: 177 I---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ L + G+ + + +YL ++E+ G+
Sbjct: 290 FRSTFFSNNYHIFRAALLAKEVGLKANGVGAF-----------TRLYYLPNAIIREFAGV 338
Query: 234 LI 235
+
Sbjct: 339 FV 340
>gi|295695151|ref|YP_003588389.1| protein of unknown function DUF218 [Bacillus tusciae DSM 2912]
gi|295410753|gb|ADG05245.1| protein of unknown function DUF218 [Bacillus tusciae DSM 2912]
Length = 188
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 69/176 (39%), Gaps = 22/176 (12%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++++LG EP +R+ + LY+ I++SGG
Sbjct: 25 PPRPADVLLILGAKIMGR--------EPGAALRARLEAGLDLYRRG----YAPRILVSGG 72
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ +E+ V + L GV + +E S DT +N FSS ++K + ++V+S
Sbjct: 73 QRRPGAPSEADVMADYLRVRGVPPRALIVEDLSSDTVENLLFSSRLMKIHGWRRAVVVTS 132
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
AYHL R+ + G++ + AL+E +Y
Sbjct: 133 AYHLPRALWLARLAGLDASGYAPA----------SADVLGTWMYALREIPAFWRSY 178
>gi|170703279|ref|ZP_02894076.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
gi|170131818|gb|EDT00349.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
Length = 219
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 78/224 (34%), Gaps = 28/224 (12%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ Q ++ +L SF I+ ++L + ++ V+ GN
Sbjct: 1 MNQRFKRGSVARIGRVLASFACLWIVAAVVLVGAGMRMPS--------EPADVAVIFGNA 52
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P +R+ +R Y+ + C + G GL E+
Sbjct: 53 LDDH-------GAPKPVLAARLDVGVRCYREGQ-----CPAFLVSGAIDGPGLNEATAMR 100
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ L+ GV D I ++ Q +T AQ + + + + ++++S YHL R++L F+
Sbjct: 101 DYLVAHGVPADRIAVDDQGDNTLATAQHTRAYLLAHRMSRVLIISQYYHLARARLAFERV 160
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
GI + Y P + +E + R
Sbjct: 161 GIAGANISAAY--------PHHFQLRDIYSSWREVPAYAVYVLR 196
>gi|111022641|ref|YP_705613.1| hypothetical protein RHA1_ro05676 [Rhodococcus jostii RHA1]
gi|110822171|gb|ABG97455.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 300
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 12/150 (8%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ P P + I++LG G + +R+ + +
Sbjct: 124 FTPPNPLPAIQGPSTAIIVLGYGLLPD-------GAMRPELINRLQAALVQSWASPMSP- 175
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II G ++G+ E+ L GV I E ++ T NA S + +++
Sbjct: 176 ----IIVTGGNPQNGITEAAAMQGWLQSHGVPAQRIHPEHRAGSTVGNALNSVPLARSLG 231
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I+V+SA H++R+ + F G+ +
Sbjct: 232 AGGAIIVTSANHIRRATVDFNVAGLPVVGA 261
>gi|108762577|ref|YP_635041.1| putative SanA protein [Myxococcus xanthus DK 1622]
gi|108466457|gb|ABF91642.1| putative SanA protein [Myxococcus xanthus DK 1622]
Length = 225
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 16/162 (9%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
YQ ++ + + ++ G G PS R+ + L++ K +
Sbjct: 46 YQDRIVPLEQAPQAPVALVFGAGLARGAV-------PSPVLAQRLDAAIALWQQGKVQT- 97
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++ GD K E+ L+E GV I + L T+ + ++++ +
Sbjct: 98 ----VLVSGDQTKPFHHETRAMRRYLVEHGVPESAILGDEAGLSTYDSCLRAATVFGAKR 153
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-LNAYYSI 213
+LV+ +HL R+ GI+ +D + +
Sbjct: 154 ---AVLVTQRFHLTRALFIANSVGIDAWGVAADEGRSTPWRY 192
>gi|326939983|gb|AEA15879.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 185
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 30/206 (14%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ + + I + R LS +++LG P
Sbjct: 4 WIFLMILLLPPLYIIYMTFRMNKVAREKLSYHSP----YVLILGAKLFGD--------RP 51
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S +R+ + S + +I+SGG + + E+ N L+ G++ I
Sbjct: 52 SLSLQNRLDVALEYLFSHPE----AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRIL 107
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 108 IEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAETPIR 164
Query: 210 YYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 165 SKR-----------KMYVREYAAIMK 179
>gi|257084233|ref|ZP_05578594.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256992263|gb|EEU79565.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 193
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSEKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N ++ L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITAASSFPKDIKNFGRELLSLGYAL 189
>gi|261407512|ref|YP_003243753.1| hypothetical protein GYMC10_3711 [Paenibacillus sp. Y412MC10]
gi|261283975|gb|ACX65946.1| protein of unknown function DUF218 [Paenibacillus sp. Y412MC10]
Length = 210
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 22/188 (11%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + + + + + K+ + P + ++LG
Sbjct: 13 RRKRVLLRVLLGLIAIMLVYSIN-VGYTIWKYAGRTVNIP---------SDAAIVLGAAV 62
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LY +I +GG + +AES
Sbjct: 63 WKGK--------PSPVFQGRIDHALWLYDQQ----YVDKLIFTGGRGSEEEVAESEAAKQ 110
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+E GV DI +ET S T QN +++ + + ++VS H+KR+ + G
Sbjct: 111 YAIEHGVPERDILVETSSTITEQNLYYANKIGDAAGLSSYLIVSDPLHMKRAMAMAEDMG 170
Query: 197 INTKASCS 204
+ S +
Sbjct: 171 LEANPSPA 178
>gi|312127289|ref|YP_003992163.1| hypothetical protein Calhy_1067 [Caldicellulosiruptor
hydrothermalis 108]
gi|311777308|gb|ADQ06794.1| protein of unknown function DUF218 [Caldicellulosiruptor
hydrothermalis 108]
Length = 195
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 24/187 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ KI + ++ F + K + I++LG
Sbjct: 2 RKFLKISLCTLASVILIFAVT------------EASIIIFGISAKPKKSDCIIVLGCAVY 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS R+ LYK II+ G ++E+
Sbjct: 50 GD--------FPSPFFRERLNRAFELYKKGYARY----IIVCGAKGPGENISEAEAGKRY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ESGV + + E +S T++N + ++ K+ I+VS+ +HL+R+ L + I
Sbjct: 98 LVESGVLPEFVLKEDKSFSTYENLLHAKRIMNKKGFKSAIIVSNMFHLERAHLIAKKLKI 157
Query: 198 NTKASCS 204
N+ S
Sbjct: 158 NSSFSGV 164
>gi|171741210|ref|ZP_02917017.1| hypothetical protein BIFDEN_00283 [Bifidobacterium dentium ATCC
27678]
gi|171276824|gb|EDT44485.1| hypothetical protein BIFDEN_00283 [Bifidobacterium dentium ATCC
27678]
Length = 348
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 23/236 (9%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ +W I L+ S + L + + ++ + +F+ + + +
Sbjct: 102 LPFAWGIMLLFSGYWFLWGPGQGMSGSEFYVRVMTFVSMMVNYIPIALFGVWFSNDICYK 161
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ I++LG + R+ + ++ TII S
Sbjct: 162 SGKAPETEYIIVLGCSILDD-------GTVTPLLRGRLDAAIAAWEQG---GRRATIITS 211
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIIL 178
GG ++ES N LL GV I LE +S T +N +FS +++ G + +
Sbjct: 212 GGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAIMDARGGAAHCTI 271
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S+YH R+ ++ + GIN +A F+ +EYI ++
Sbjct: 272 ATSSYHCLRAAMFARRLGINASCVG-----------GHTAAFFYPAAFFREYIALI 316
>gi|315173909|gb|EFU17926.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 193
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 65/167 (38%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG T + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILG---TRVLGTSKETALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N ++ L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITAASSFPKDIKNFGRELLSLGYAL 189
>gi|315646581|ref|ZP_07899699.1| hypothetical protein PVOR_14364 [Paenibacillus vortex V453]
gi|315278224|gb|EFU41544.1| hypothetical protein PVOR_14364 [Paenibacillus vortex V453]
Length = 217
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 11/147 (7%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
++ + ++ ++LG P +R R+ + + Y +
Sbjct: 43 WKIESAESSPAEKADVGIILGASMWGDQPSPGLR--------ERLEQALVEYNAG---RF 91
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I+ G D + E+ N L+E+GV + I LE ++ T++N +S +++N
Sbjct: 92 DTFIVSGGLDKPGYTYTEAEGMRNFLVEAGVPEERIYLENEATSTYENLLYSQDIMENNG 151
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINT 199
K I+++ YH RS G +
Sbjct: 152 WKTAIIITHDYHGTRSMEVATTLGYDH 178
>gi|37520492|ref|NP_923869.1| hypothetical protein glr0923 [Gloeobacter violaceus PCC 7421]
gi|35211486|dbj|BAC88864.1| glr0923 [Gloeobacter violaceus PCC 7421]
Length = 239
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 82/229 (35%), Gaps = 36/229 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+W I ++ +LL F L Y + + IV+
Sbjct: 43 WWIRPLPWKIPISVLAIALLLVYFAAVSPPALALADAQLGDYPEAPSNL----KADAIVV 98
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G + T R+ RL+++ + + + G ++
Sbjct: 99 LGRGERLRHT--------------RVELAARLWRAGRAPRIFIS-----------GRNDA 133
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L G+ + E S T +NA+F++ +++ + ++LV+ A H+ RS
Sbjct: 134 DTMVADLRRMGLPAKAVAGEECSRTTQENAEFTARILRPAGVRTLLLVTDAPHMLRSLRT 193
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
F+ G N+ A S + + + ++EY+G+L + G
Sbjct: 194 FKEAGFNSAAVTSPFPEKL-------SELRERLIVVREYLGLLTYRWLG 235
>gi|283455426|ref|YP_003359990.1| hypothetical protein BDP_0493 [Bifidobacterium dentium Bd1]
gi|283102060|gb|ADB09166.1| hypothetical protein BDP_0493 [Bifidobacterium dentium Bd1]
Length = 346
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 87/236 (36%), Gaps = 23/236 (9%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ +W I L+ S + L + + ++ + +F+ + + +
Sbjct: 100 LPFAWGIMLLFSGYWFLWGPGQGMSGSEFYVRVMTFVSMMVNYIPIALFGVWFSNDICYK 159
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ I++LG + R+ + ++ TII S
Sbjct: 160 SGKAPETEYIIVLGCSILDD-------GTVTPLLRGRLDAAIAAWEQG---GRRATIITS 209
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIIL 178
GG ++ES N LL GV I LE +S T +N +FS +++ G + +
Sbjct: 210 GGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAIMDARGGAAHCTI 269
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S+YH R+ ++ + GIN +A F+ +EYI ++
Sbjct: 270 ATSSYHCLRAAMFARRLGINASCVG-----------GHTAAFFYPAAFFREYIALI 314
>gi|325068099|ref|ZP_08126772.1| hypothetical protein AoriK_09771 [Actinomyces oris K20]
Length = 219
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 52/157 (33%), Gaps = 16/157 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ ++LG +PS R+ LY S + + ++ GD
Sbjct: 39 ARAPVAIVLGAAVHAD-------GQPSPWLAHRLDAAAELYTSGRVEA-----VLVSGDN 86
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
++ G E V + LL G+ I L+ DT+ + + + +LV+ +
Sbjct: 87 RRAGYDEPTVMRSYLLSRGIPEQAIALDYAGFDTYDTCVRARRIFG---IERALLVTQDF 143
Query: 184 HLKRSQLYFQHFGINTKASC-SDYLNAYYSIIPLSAN 219
H R+ + G++ S +
Sbjct: 144 HEPRAVAICRSVGLDVDGVGDSRARSDRIGWAVSWTR 180
>gi|111019419|ref|YP_702391.1| hypothetical protein RHA1_ro02428 [Rhodococcus jostii RHA1]
gi|110818949|gb|ABG94233.1| possible membrane protein [Rhodococcus jostii RHA1]
Length = 222
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/217 (11%), Positives = 68/217 (31%), Gaps = 29/217 (13%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +R++ + + + + + + + + ++++LG
Sbjct: 4 RRIVRRLVGIGAGLGALAVLVVAASTVWISREA----SGHVYDVDDAPEAPVVIVLGAQV 59
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P R+ +RL + + ++ GD E +
Sbjct: 60 RDGK--------PREYLAGRLDVAVRLVQDGRA-----RAVLVSGDGAGRSGDEIAAMTD 106
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E G++R+ I + LDT+ + ++V+ +H+ R+ + G
Sbjct: 107 YLVEKGIDRNKIVGDRYGLDTYDTCARAVQTYG---VTKALIVTQGFHVPRAVALCRGAG 163
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I+ + + + ++E +
Sbjct: 164 IDVAGVNAGCECRPIT---------MARNTVRESLAR 191
>gi|307289790|ref|ZP_07569727.1| hypothetical protein HMPREF9509_00109 [Enterococcus faecalis
TX0411]
gi|306499175|gb|EFM68653.1| hypothetical protein HMPREF9509_00109 [Enterococcus faecalis
TX0411]
Length = 193
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N + L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITAASSFPKDIKNFGRELFSLGYAL 189
>gi|331701646|ref|YP_004398605.1| hypothetical protein Lbuc_1288 [Lactobacillus buchneri NRRL
B-30929]
gi|329128989|gb|AEB73542.1| protein of unknown function DUF218 [Lactobacillus buchneri NRRL
B-30929]
Length = 351
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F++ + W + ++LL L F + + + I++LG G +
Sbjct: 136 FLTMLIAYILLTVWNTLSSMLLYQLYF----------PRSNKDYIIVLGAGLVDGHKVGR 185
Query: 85 IRIEPSFQSYSRIFETMRLYKSC-KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ RI + + Y + + ++ SGG L ES+ + LE G
Sbjct: 186 L-------LGGRINKGIAFYNQQIHRTNKRAKLVFSGGQGGDELLPESVAMRDYALEHGA 238
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHLKRSQLYFQHFGINTK 200
D +E QS++TFQN +FS ++I G V+S YH R+ + + G++
Sbjct: 239 RGADTLIEDQSVNTFQNMKFSKALIDKDAGSTNHRIVFVTSNYHTLRAGILSREVGMHAF 298
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S + +YL ++EY+ +++
Sbjct: 299 GIGS-----------KTPFYYLPNAVIREYLALVV 322
>gi|323435882|ref|ZP_01048691.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|321496197|gb|EAQ39925.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 207
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 61/206 (29%), Gaps = 28/206 (13%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
G I+ + + + +++LG S
Sbjct: 3 LLACGIFILSGHVKSSTKNQ---TYNNIAEVPQAYTVIVLGASVRSNGD-------LSTM 52
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ + LY++ K + GD E L+ GV +DI L+
Sbjct: 53 LEDRVSSALSLYRAGKVSRFLLS-----GDNGTKSYNEPKAMQQYLINQGVPEEDIFLDY 107
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
DT+ + +SS+ + I+V+ +HL R+ G++ D
Sbjct: 108 AGFDTYDSMYRASSVFNVKE---AIVVTQKFHLPRALFIANRLGLDYYGFIGDKHIYQRE 164
Query: 213 IIPLSANFYLTELALKEYIGILIAYY 238
+E + + AY
Sbjct: 165 NANKR----------RELLANVKAYL 180
>gi|29345977|ref|NP_809480.1| hypothetical protein BT_0567 [Bacteroides thetaiotaomicron
VPI-5482]
gi|298387372|ref|ZP_06996925.1| protein SanA [Bacteroides sp. 1_1_14]
gi|29337871|gb|AAO75674.1| putative protein involved in barrier function of the cell envelope
[Bacteroides thetaiotaomicron VPI-5482]
gi|298260041|gb|EFI02912.1| protein SanA [Bacteroides sp. 1_1_14]
Length = 214
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 27/219 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+K+F+++ + + I I +K + N+ +LLG
Sbjct: 2 KKKLFYITLIIAILCVISI-FICDWTIKK--NAASCIYTEISDIPANNVGLLLGT----- 53
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + RI + LYK+ K + I+ GD +K E L+
Sbjct: 54 -SPKLKSGNNNLYFDYRIDAAVELYKAGKINY-----ILISGDNRKEDYNEPEEMKKALM 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV I L+ T + + + + ++S +H +R+ + GI
Sbjct: 108 QKGVPEKSIYLDYAGFRTLDSVVRAKEVFGQ---TRLTIISQRFHNERAIYLAEKNGITA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ ++ Y + ++E + +
Sbjct: 165 IGFNARDVDVYAGLRTN----------IRELFARVKMFI 193
>gi|113475668|ref|YP_721729.1| hypothetical protein Tery_2008 [Trichodesmium erythraeum IMS101]
gi|110166716|gb|ABG51256.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 213
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 22/182 (12%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + I ++ G G P+ R+ + LY
Sbjct: 41 YQNSEEVPVKAIAIVFGAGIWED-------GTPTPMLADRVQGAINLYNIGSIQK----- 88
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+ GD E + GV +DI L++ T+++ + +
Sbjct: 89 ILMTGDNSTPDYNEVKAMQEYAINHGVSVEDIILDSSGFSTYKSCYRAKEIFG---ITQA 145
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LV+ YHL R+ + G++ N + +++E +L A
Sbjct: 146 VLVTQNYHLPRAVYTCRQLGVDVVGLG-------MPDWGKFRNDSMRRYSIREVFAVLKA 198
Query: 237 YY 238
++
Sbjct: 199 FW 200
>gi|329571446|gb|EGG53133.1| hypothetical protein HMPREF9520_02827 [Enterococcus faecalis
TX1467]
Length = 401
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 91/232 (39%), Gaps = 31/232 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P K + I
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------KYTQDYI 221
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 222 DVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 274
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 275 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 334
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L+ + G+ + +A ++L ++E+I I++ Y
Sbjct: 335 FRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMY 375
>gi|293380584|ref|ZP_06626640.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|290922852|gb|EFD99798.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
Length = 367
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 84/237 (35%), Gaps = 28/237 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ I I+ R + + + ++ L+ L +
Sbjct: 121 LALIISIIVLLGPGKYLPRWLSLALASIPAIAIYLGLVLYNFLVNLLLYQIYPRTYHQ-- 178
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI-IISGG 121
+ +++LG+G + S +RI ++ Q I I+SGG
Sbjct: 179 ----DYLIVLGSGLINGD-------QVSKLLAARINRAIQYSNRQYQKGRKRPILIMSGG 227
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
++E++ + GV D I LE QS +T++N FS + G +
Sbjct: 228 QGADKKISEALAMSRFAQRRGVSVDRILLEDQSKNTYENMLFSKRIATKDFGNSHFRARF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 288 FSNNYHIFRAALLAKEVGLKANGVGAY-----------TRFYYLPNAIIREFAGVFV 333
>gi|313124735|ref|YP_004034994.1| hypothetical protein LDBND_2002 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312281298|gb|ADQ62017.1| Hypothetical protein LDBND_2002 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 366
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 94/241 (39%), Gaps = 34/241 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF--MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
ML W+F+ + ++ + ++ + + + + + +LL +
Sbjct: 125 MLGLWVFIFIGHFTRSTPAGLRLILDIFPTVAVYLAAVMYNFLVNLLLYQI--------- 175
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTII 117
+ N +++LG G + S +RI ++ Y ++ I
Sbjct: 176 -VPRRYQQNYLIVLGAGLIHGD-------QISNIQAARINRAIQFAYHQQEKGQPLPKFI 227
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI- 176
+SGG ++E+ ++ GV ++ I LE QS +T QN +FS + N G +
Sbjct: 228 MSGGQGPNEKISEAAAMAAYAIKRGVPKELILLEDQSRNTEQNMEFSQIVAYNDYGNDNF 287
Query: 177 --ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S YH+ RS +Y + G++ S +YL L+E+ G+
Sbjct: 288 KACFFTSNYHVFRSAIYAKRAGLDANGIGSYTRP-----------YYLPNAVLREFAGMF 336
Query: 235 I 235
+
Sbjct: 337 V 337
>gi|170017164|ref|YP_001728083.1| integral membrane protein [Leuconostoc citreum KM20]
gi|169804021|gb|ACA82639.1| Integral membrane protein [Leuconostoc citreum KM20]
Length = 353
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 94/238 (39%), Gaps = 23/238 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++ + +++ L + F+ S+ + +L L + ++ P
Sbjct: 113 LVIGILLIMMPVLFNLLNHYLPNNKIVTFIENVSYSCQNYLVFWVLAFLASYFLTKIVKP 172
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI-IIS 119
K + ++LG+G T S SRI + S I I+S
Sbjct: 173 --KYNKEYAIVLGSGLINGDT-------VSPLLGSRILVAAKFKAKQLAKSKKKMILIMS 223
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS--MIKNMQGKNII 177
GG L ES+ +++GV DI ++ QS +T+QN FS + + + I
Sbjct: 224 GGQGSDEKLPESVAMKAYAIKNGVPESDILVDDQSKNTYQNMLFSKQVIIDNGLDLQKGI 283
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ + + G+N S ++ ++L ++EYI IL+
Sbjct: 284 FTTNDYHVFRAAGFARLVGLNIDGIGS-----------KTSKYFLPNALIREYIAILV 330
>gi|297625459|ref|YP_003687222.1| hypothetical protein PFREUD_02530 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921224|emb|CBL55774.1| Hypothetical secreted protein [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 223
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 15/179 (8%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R++ +L+ + ++ T + + + + + + ++ ++LG G
Sbjct: 2 RRRVSHPLRVILVGMVVLACLVLTGSWALVHGAARDRVFTAHSAPNRDVALVLGAGLNAD 61
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
PS R+ LY S K +I+ GD + +E + L
Sbjct: 62 -------GSPSLYLAGRLRAAYDLYVSQK-----VKVILVSGDNRTVTYSEPGAMRSYLR 109
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
GV D+ + LDT+ + + ++ +V +YHL R+ + GI+
Sbjct: 110 LLGVPDRDVVADYAGLDTYDSCYRARNIFGVNSVT---VVGQSYHLDRAVATCRSIGID 165
>gi|256763425|ref|ZP_05504005.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|257417033|ref|ZP_05594027.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|256684676|gb|EEU24371.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|257158861|gb|EEU88821.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|295113736|emb|CBL32373.1| Uncharacterized conserved protein [Enterococcus sp. 7L76]
gi|315145741|gb|EFT89757.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
Length = 193
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKKHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N ++ L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITAASSFPKDIKNFGRELLSLGYAL 189
>gi|269213925|ref|ZP_05983151.2| putative periplasmic protein [Neisseria cinerea ATCC 14685]
gi|269145137|gb|EEZ71555.1| putative periplasmic protein [Neisseria cinerea ATCC 14685]
Length = 181
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 19/186 (10%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y+ + ++LG PS RI + LY Q
Sbjct: 2 YRLNEGVLPAGTRADAALVLGAAAWDK--------RPSPVFRERINHAIALY----QGHR 49
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II +GG +K + E+ V L+ GV +I E S +T++N +++
Sbjct: 50 VGKIIFTGGRSKKGYMTEAEVGRRYALKQGVPAHNILFENTSRNTYENLNNIRPILQANG 109
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++++VS YHL R+ + G+ S + + ++ L E
Sbjct: 110 ISSVVIVSDPYHLARAAEMAEDLGVRVYVSAT-----PTTRFDTASG--KKNFILHEGYA 162
Query: 233 ILIAYY 238
+ +
Sbjct: 163 LTLYRL 168
>gi|114320844|ref|YP_742527.1| hypothetical protein Mlg_1691 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227238|gb|ABI57037.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 204
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 16/177 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + V+LG PS RI + LY++ + +I +G
Sbjct: 25 EDDTAADAAVILGAAAWNG--------RPSPVLRERIHHALSLYEAGQVD----LLIFTG 72
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G LAES+ L G+ +D E S DT+ N + +++++ +++VS
Sbjct: 73 GQAPGEPLAESVAAARYALARGLAAEDAYCEVASADTWNNLRGAAAVVAEHDLGRVLVVS 132
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
HL+R+ + G++ + + + + + NF E+ L Y G L+
Sbjct: 133 DPLHLRRAVAMARDLGLDAHPAPT--PTSRFRGLEAKRNFLWAEVRL--YGGYLLQR 185
>gi|225027612|ref|ZP_03716804.1| hypothetical protein EUBHAL_01869 [Eubacterium hallii DSM 3353]
gi|224955068|gb|EEG36277.1| hypothetical protein EUBHAL_01869 [Eubacterium hallii DSM 3353]
Length = 250
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 24/181 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S + ++ +++LG S R+ + + I+
Sbjct: 93 SAKKPQENATLIVLGCKVYGE--------HASRSLRERLDAALIYLEENPNSQC----IV 140
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNII 177
SGG + ++E+ L + G+ I E +S T +N +FS +++ G NI
Sbjct: 141 SGGMGEGEKISEAECMYRYLTKKGINSSRIIKEDKSTSTRENLRFSKKIMEEKGLGNNIA 200
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +S YH R+ + G + A + + + P ++E GIL
Sbjct: 201 IATSEYHQYRASQIAKSLGFSVGAVS---GHTAWWLFP--------TFYMRELYGILYQA 249
Query: 238 Y 238
Sbjct: 250 L 250
>gi|15672559|ref|NP_266733.1| hypothetical protein L171552 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723467|gb|AAK04675.1|AE006291_9 hypothetical protein L171552 [Lactococcus lactis subsp. lactis
Il1403]
Length = 310
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 81/218 (37%), Gaps = 23/218 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+++ L + + + I+++ ++LL I + +L Y
Sbjct: 107 LLIAFPALFMLFTFSTKTIPQIIWYILLYILLIDIILCFLFAAYIL------YSWMSQMI 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+K + I++LG+G P ++ SR+ + + Y+ ++SG
Sbjct: 161 PLQKKIDYIIILGSGVRSEEVPPLLK--------SRLDKGIEYYQKNP----TAKFVVSG 208
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-----GKN 175
G ++E+ L + I E + T++N FS +I +
Sbjct: 209 GQGADEPVSEAFAMRKYLHSQNIPNHQILFEDKFTTTYENMLFSKRIINEDWSDKEMPPS 268
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
II ++ YH+ R LY Q + + + + +
Sbjct: 269 IIFSTNNYHVLRGSLYAQRVKLKAQGVGGTHSTLFLTY 306
>gi|229012351|ref|ZP_04169528.1| hypothetical protein bmyco0001_27960 [Bacillus mycoides DSM 2048]
gi|228748987|gb|EEL98835.1| hypothetical protein bmyco0001_27960 [Bacillus mycoides DSM 2048]
Length = 210
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 17/176 (9%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
LL + + ++ + ++LG +
Sbjct: 15 VFLLMICSIILYVSYAAYDIWSYRFKT-----DDGVKTDAGIVLGAASWNGK-------- 61
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS RI + LYK+ II +GG + L E+ L+ GV+ +DI
Sbjct: 62 PSPVFKERINHAISLYKNG----NIKKIIFTGGTKFEAELEEARTARVYALKHGVKEEDI 117
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ET+SL T N + + + + +VS H+KR+ +H I AS +
Sbjct: 118 LIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIKIEAYASPT 173
>gi|114705471|ref|ZP_01438379.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
gi|114540256|gb|EAU43376.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
Length = 234
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 79/230 (34%), Gaps = 35/230 (15%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + + RK F +++ G+ + L++ + + + + + IV+L
Sbjct: 18 WAQMLRRGRKRRFAILCLVVLVAGGFIVGS--FLRYAETTAA--VSRLENVPPADAIVVL 73
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G +RI + L K+ + + + + +A +
Sbjct: 74 TGG------------------ANRIERAISLLKNGYGKRLLISGV--NENTSARAIARAT 113
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L E V+ D +LDT NA + +ILV+S YH++RS + F
Sbjct: 114 NTDLDLFECCVDID-----VAALDTVGNAMEAVRWAAENGFDELILVTSDYHMQRSLIEF 168
Query: 193 QHFG--INTKASCSDYLNAYY-SIIPLSANFYLTELALKEYIGILIAYYR 239
G + IP E+ + EY ++ A R
Sbjct: 169 DRVGDLDRITPVAVRLDELWQDDTIPTRRGL---EVLVMEYAKLMAARVR 215
>gi|161508196|ref|YP_001578167.1| hypothetical protein lhv_2072 [Lactobacillus helveticus DPC 4571]
gi|160349185|gb|ABX27859.1| hypothetical protein lhv_2072 [Lactobacillus helveticus DPC 4571]
Length = 367
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 83/237 (35%), Gaps = 28/237 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ I ++ + R + + + + ++ L+ L +
Sbjct: 121 VALILSLMFLFGSGQYLPRWLSVLLASIPAIAIYLGLVLYNFLINLLLYQ------IYPR 174
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +++LG G S +RI ++ Q III G
Sbjct: 175 RYKQDYLIVLGAGLINGD-------RVSKLLAARINRAIQYSNRQYQKGRKRPIIIMSGG 227
Query: 123 P-QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
+ E++ + G++ + + +E +S +T+QN FS + G +
Sbjct: 228 QGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSNFRSTF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 288 FSNNYHIFRAALLAKEVGLKANGVGAF-----------TRLYYLPNAIIREFAGVFV 333
>gi|239502384|ref|ZP_04661694.1| hypothetical protein AbauAB_08717 [Acinetobacter baumannii AB900]
Length = 261
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 80/245 (32%), Gaps = 30/245 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L + + FF + GW L+ L + + +
Sbjct: 36 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFNFIKENK 94
Query: 61 QWKKD---GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
++ I++LG+G +PS R+ + S Q +I
Sbjct: 95 DASQNLPAVKAIIVLGSGVENG--------QPSAILAKRLNTAAPVALSQPQ----AKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++GG +E++V + L + + +D + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKESEALVMSRYLEQHFHIAKDRMILEDKSTSTELNLKNSKPLLEQAHINAN 202
Query: 177 I---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+V+S +H R+ + G + L+EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRY----------NAWLREYFAY 252
Query: 234 LIAYY 238
+
Sbjct: 253 ASGWL 257
>gi|320161035|ref|YP_004174259.1| hypothetical protein ANT_16330 [Anaerolinea thermophila UNI-1]
gi|319994888|dbj|BAJ63659.1| hypothetical protein ANT_16330 [Anaerolinea thermophila UNI-1]
Length = 202
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 74/224 (33%), Gaps = 30/224 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
K + +LL I I LL + L+ + + IV+L G
Sbjct: 2 KTKSLWSILAILLGIVISCLCITPFLLGSIGS----LLVISTPLQPADAIVVLSGGRD-- 55
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
R+ + + L K + I+ D + G + ++
Sbjct: 56 --------------LQRLEKAVNLMKEGQA---GYLILTKTEDITESGRQTADYLASEAH 98
Query: 140 ESGVERDDIKLETQ-SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF----QH 194
+ G+ I + + S +T Q A + +++ K +I+V+ YH RS++ F +
Sbjct: 99 QRGIPVPKIVITQKTSKNTEQEAIATLEILRERGWKTLIVVTDPYHTLRSRIIFREVMRK 158
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I S + + + N +E + +L
Sbjct: 159 DSIKVYTVPSKKPDVPSWLWYIDGN--SRRAVWREILSLLAYLL 200
>gi|226361567|ref|YP_002779345.1| hypothetical protein ROP_21530 [Rhodococcus opacus B4]
gi|226240052|dbj|BAH50400.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 222
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/188 (12%), Positives = 63/188 (33%), Gaps = 20/188 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +R++ + + + + + + + + + ++++LG
Sbjct: 4 RRIVRRLVGIGAGLGALAVLVVAASTVWISREA----SGHVYDVEDAPEAPVVIVLGAQV 59
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P R+ +RL + + ++ GD E +
Sbjct: 60 RDGK--------PQEYLAGRLDVAVRLVRDGRA-----RAVLVSGDGNGRSGDEIAAMTD 106
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E+G++R I + LDT+ + ++V+ +H+ R+ + G
Sbjct: 107 YLVENGIDRSKIVGDRYGLDTYDTCARAVQTYG---VTKALIVTQGFHVPRAVALCRGAG 163
Query: 197 INTKASCS 204
I+ +
Sbjct: 164 IDVAGVNA 171
>gi|168234855|ref|ZP_02659913.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734850|ref|YP_002113116.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194710352|gb|ACF89573.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197291873|gb|EDY31223.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 206
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 72/218 (33%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + I + + + ++ G G +
Sbjct: 2 KYRYITRIAAGIILIMATVFINNAIAIY-------QFSQQDQTCVADCAIVAGAGVSGK- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 54 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ + + Q + +LVS H+ R + Q GI+++
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQIQRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 162
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 163 SSPTRSTRYKSWW-------AKTRFLLRETFYYSGYRL 193
>gi|308069364|ref|YP_003870969.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305858643|gb|ADM70431.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 228
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 17/174 (9%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ +++F +G + S + I ++LG
Sbjct: 31 LVLCLMIFILVGLVWAGIRVWDM------NTAASTTPLQQVQIGIVLGASMWGA------ 78
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
EPS R+ E +RLY++ + I+ G D E+ L++ GV
Sbjct: 79 --EPSPGLKERLEEALRLYRNGTVQRL---IVSGGLDKPDFPYTEAEGMQRYLVDRGVPV 133
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
I LE + T++N +S ++ + ++++ +YH R+ Q +
Sbjct: 134 QHIVLENHATSTYENLLYSQRIMSEYGWISTVIITHSYHGPRAMEIAQFLKFDH 187
>gi|291302129|ref|YP_003513407.1| hypothetical protein Snas_4671 [Stackebrandtia nassauensis DSM
44728]
gi|290571349|gb|ADD44314.1| protein of unknown function DUF218 [Stackebrandtia nassauensis DSM
44728]
Length = 225
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 72/218 (33%), Gaps = 27/218 (12%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L S R++ ++ L G+ + P ++++LG
Sbjct: 4 LRWWSFRRLVVLALVASLGLSAVVGVARWWVAAGADGHVYGVGEVP----KAPVVMVLGA 59
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS +R+ RLY++ K +++ GD + E
Sbjct: 60 RVYEG-------GRPSPFLEARLELARRLYEAGKAE-----VVLVSGDNGQEEYNEVDPM 107
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+E GV + + + DT+ + + + + + +V+ +H++R+ +
Sbjct: 108 REWLIERGVPGERVVGDYAGFDTYDSCVRAREVFG---VEALTVVTQGFHVERAVTLCRQ 164
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
GI D + Y + ++E+
Sbjct: 165 AGIEANGVGDDSVRRYPRPWKVGT--------VREWAA 194
>gi|253734225|ref|ZP_04868390.1| membrane protein [Staphylococcus aureus subsp. aureus TCH130]
gi|253727920|gb|EES96649.1| membrane protein [Staphylococcus aureus subsp. aureus TCH130]
Length = 322
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + K+ +II++LG G P + +R+ + +Y+
Sbjct: 134 WTVSYRHRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS--- 182
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II+SGG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N+
Sbjct: 183 ATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLY 242
Query: 173 GKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ + +V +S +H+ R+ Q G++ S Y+ + + +K+Y
Sbjct: 243 HEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDY 291
Query: 231 IGILIAY 237
+G++ Y
Sbjct: 292 LGVMYQY 298
>gi|104774771|ref|YP_619751.1| hypothetical protein Ldb2161 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514906|ref|YP_813812.1| hypothetical protein LBUL_1995 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103423852|emb|CAI98885.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116094221|gb|ABJ59374.1| hypothetical protein LBUL_1995 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 366
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 94/241 (39%), Gaps = 34/241 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF--MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
ML W+F+ + ++ + ++ + + + + + +LL +
Sbjct: 125 MLGLWVFIFIGHFTRSTPTGLRLILDIFPTVAVYLAAVMYNFLVNLLLYQI--------- 175
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTII 117
+ N +++LG G + S +RI ++ Y ++ I
Sbjct: 176 -VPRRYQQNYLIVLGAGLIHGD-------QISNIQAARINRAIQFAYHQQEKGQPLPKFI 227
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI- 176
+SGG ++E+ ++ GV ++ I LE QS +T QN +FS + N G +
Sbjct: 228 MSGGQGPNEKISEAAAMAAYAIKRGVPKELILLEDQSRNTEQNMEFSQIVAYNDYGNDNF 287
Query: 177 --ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S YH+ RS +Y + G++ S +YL L+E+ G+
Sbjct: 288 KACFFTSNYHVFRSAIYAKRAGLDANGIGSYTRP-----------YYLPNAVLREFAGMF 336
Query: 235 I 235
+
Sbjct: 337 V 337
>gi|15925348|ref|NP_372882.1| hypothetical protein SAV2358 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927938|ref|NP_375471.1| hypothetical protein SA2148 [Staphylococcus aureus subsp. aureus
N315]
gi|21284008|ref|NP_647096.1| hypothetical protein MW2279 [Staphylococcus aureus subsp. aureus
MW2]
gi|49487141|ref|YP_044362.1| hypothetical protein SAS2249 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650902|ref|YP_187160.1| hypothetical protein SACOL2354 [Staphylococcus aureus subsp. aureus
COL]
gi|87162083|ref|YP_494939.1| hypothetical protein SAUSA300_2304 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196279|ref|YP_501100.1| hypothetical protein SAOUHSC_02638 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268795|ref|YP_001247738.1| hypothetical protein SaurJH9_2382 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394865|ref|YP_001317540.1| hypothetical protein SaurJH1_2428 [Staphylococcus aureus subsp.
aureus JH1]
gi|151222471|ref|YP_001333293.1| hypothetical protein NWMN_2259 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156980673|ref|YP_001442932.1| hypothetical protein SAHV_2342 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161510552|ref|YP_001576211.1| hypothetical protein USA300HOU_2340 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141291|ref|ZP_03565784.1| hypothetical protein SauraJ_06573 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253314698|ref|ZP_04837911.1| hypothetical protein SauraC_00695 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255007134|ref|ZP_05145735.2| hypothetical protein SauraM_11715 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257794700|ref|ZP_05643679.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258407380|ref|ZP_05680523.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258422292|ref|ZP_05685204.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258439684|ref|ZP_05690430.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258446541|ref|ZP_05694696.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258450342|ref|ZP_05698434.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|258452631|ref|ZP_05700635.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|262049818|ref|ZP_06022682.1| hypothetical protein SAD30_0164 [Staphylococcus aureus D30]
gi|262052093|ref|ZP_06024302.1| hypothetical protein SA930_1560 [Staphylococcus aureus 930918-3]
gi|269203990|ref|YP_003283259.1| hypothetical protein SAAV_2423 [Staphylococcus aureus subsp. aureus
ED98]
gi|282925248|ref|ZP_06332907.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282926912|ref|ZP_06334539.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|284025381|ref|ZP_06379779.1| hypothetical protein Saura13_12367 [Staphylococcus aureus subsp.
aureus 132]
gi|294848900|ref|ZP_06789645.1| hypothetical protein SKAG_00971 [Staphylococcus aureus A9754]
gi|295405045|ref|ZP_06814858.1| hypothetical protein SMAG_00190 [Staphylococcus aureus A8819]
gi|296275444|ref|ZP_06857951.1| hypothetical protein SauraMR_03830 [Staphylococcus aureus subsp.
aureus MR1]
gi|297209823|ref|ZP_06926219.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297244102|ref|ZP_06927992.1| hypothetical protein SLAG_00189 [Staphylococcus aureus A8796]
gi|300910835|ref|ZP_07128285.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|304379551|ref|ZP_07362285.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|13702309|dbj|BAB43450.1| SA2148 [Staphylococcus aureus subsp. aureus N315]
gi|14248132|dbj|BAB58520.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|21205451|dbj|BAB96144.1| MW2279 [Staphylococcus aureus subsp. aureus MW2]
gi|49245584|emb|CAG44062.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285088|gb|AAW37182.1| membrane protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|87128057|gb|ABD22571.1| putative membrane protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203837|gb|ABD31647.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741864|gb|ABQ50162.1| protein of unknown function DUF218 [Staphylococcus aureus subsp.
aureus JH9]
gi|149947317|gb|ABR53253.1| protein of unknown function DUF218 [Staphylococcus aureus subsp.
aureus JH1]
gi|150375271|dbj|BAF68531.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156722808|dbj|BAF79225.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160369361|gb|ABX30332.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257788672|gb|EEV27012.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257840892|gb|EEV65343.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257841723|gb|EEV66160.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257847460|gb|EEV71462.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257854609|gb|EEV77557.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257856434|gb|EEV79343.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257859703|gb|EEV82547.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|259159994|gb|EEW45029.1| hypothetical protein SA930_1560 [Staphylococcus aureus 930918-3]
gi|259162125|gb|EEW46703.1| hypothetical protein SAD30_0164 [Staphylococcus aureus D30]
gi|262076280|gb|ACY12253.1| hypothetical protein SAAV_2423 [Staphylococcus aureus subsp. aureus
ED98]
gi|269941943|emb|CBI50354.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282591363|gb|EFB96436.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282592649|gb|EFB97658.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|285818021|gb|ADC38508.1| Integral membrane protein [Staphylococcus aureus 04-02981]
gi|294824279|gb|EFG40703.1| hypothetical protein SKAG_00971 [Staphylococcus aureus A9754]
gi|294969990|gb|EFG46008.1| hypothetical protein SMAG_00190 [Staphylococcus aureus A8819]
gi|296885496|gb|EFH24433.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297178880|gb|EFH38125.1| hypothetical protein SLAG_00189 [Staphylococcus aureus A8796]
gi|300887815|gb|EFK83010.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|302752229|gb|ADL66406.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341896|gb|EFM07801.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312830705|emb|CBX35547.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128719|gb|EFT84720.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315198096|gb|EFU28427.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|329315045|gb|AEB89458.1| Membrane protein, putative [Staphylococcus aureus subsp. aureus
T0131]
gi|329723592|gb|EGG60121.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21172]
gi|329726055|gb|EGG62528.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21189]
gi|329730403|gb|EGG66793.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21193]
Length = 322
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + K+ +II++LG G P + +R+ + +Y+
Sbjct: 134 WTVSYRHRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS--- 182
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II+SGG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N+
Sbjct: 183 ATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLY 242
Query: 173 GKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ + +V +S +H+ R+ Q G++ S Y+ + + +K+Y
Sbjct: 243 HEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDY 291
Query: 231 IGILIAY 237
+G++ Y
Sbjct: 292 LGVMYQY 298
>gi|300811552|ref|ZP_07092040.1| putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497470|gb|EFK32504.1| putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 366
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 94/241 (39%), Gaps = 34/241 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF--MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
ML W+F+ + ++ + ++ + + + + + +LL +
Sbjct: 125 MLGLWVFIFIGHFTRSTPTGLRLILDIFPTVAVYLAAVMYNFLVNLLLYQI--------- 175
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTII 117
+ N +++LG G + S +RI ++ Y ++ I
Sbjct: 176 -VPRRYQQNYLIVLGAGLIHGD-------QISNIQAARINRAIQFAYHQQEKGQPLPKFI 227
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI- 176
+SGG ++E+ ++ GV ++ I LE QS +T QN +FS + N G +
Sbjct: 228 MSGGQGPNEKISEAAAMAAYAIKRGVPKELILLEDQSRNTEQNMEFSQIVAYNDYGNDNF 287
Query: 177 --ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S YH+ RS +Y + G++ S +YL L+E+ G+
Sbjct: 288 KACFFTSNYHVFRSAIYAKRAGLDANGIGSYTRP-----------YYLPNAVLREFAGMF 336
Query: 235 I 235
+
Sbjct: 337 V 337
>gi|163840431|ref|YP_001624836.1| hypothetical protein RSal33209_1686 [Renibacterium salmoninarum
ATCC 33209]
gi|162953907|gb|ABY23422.1| hypothetical membrane protein [Renibacterium salmoninarum ATCC
33209]
Length = 282
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 98/236 (41%), Gaps = 25/236 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ L + + +L + + LLF + + ++
Sbjct: 41 LIAGVALLTLPVFAVLLVLTWQPIAIGLAALLFFLCSYFGVVFVVFLVY----AVVYGRM 96
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++++ + +V+LG+ P +R SR+ + + LY+ +I SG
Sbjct: 97 RYQRSPDAVVVLGSQIINGKAPPLLR--------SRLDKGLELYRE-ISVGAAPLLIPSG 147
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILV 179
G E L+++G D+ E ++++T QN QFS+++ + + ++++V
Sbjct: 148 GQGVGESRPEGAAMAEYLVDAGAPPHDVVPELRAVNTAQNLQFSAAVAREYERLGSLVVV 207
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ L + GIN + S +A ++L L+E++ IL
Sbjct: 208 TNNYHVLRAALLSRKLGINAEVVGS-----------PTAGYFLPSAFLREFVAILK 252
>gi|194367604|ref|YP_002030214.1| hypothetical protein Smal_3832 [Stenotrophomonas maltophilia
R551-3]
gi|194350408|gb|ACF53531.1| protein of unknown function DUF218 [Stenotrophomonas maltophilia
R551-3]
Length = 210
Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 21/211 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + + + I + ++ + + I++LG
Sbjct: 7 RHRTGLLGWLWRLFVLLVIWLLGVTAWIVWVGER---------DQAAKADAIIVLGAAAY 57
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS RI + LY++ I G +ES V
Sbjct: 58 DAK--------PSPVFEERIRHGLDLYEARYAP---LLIFTGGYGGTGARFSESQVARRY 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ G+ D I +ET S +T QN + +++ +I+VS H+ R+ + GI
Sbjct: 107 ALKHGIPDDAILIETASRNTVQNLVEAKRLMEQRDLHRVIIVSDPLHMARALRLSKALGI 166
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+ AS + + S
Sbjct: 167 DALASSTP-STRFRSFHTSWRFLVQEIYFFH 196
>gi|323463635|gb|ADX75788.1| membrane protein [Staphylococcus pseudintermedius ED99]
Length = 317
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/259 (16%), Positives = 97/259 (37%), Gaps = 45/259 (17%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI------FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
+++ I L ++ + + I +++ S + +IP +L Q Q
Sbjct: 61 LVIGLILLALTLYRHIQTYWHIIGHVITYHLAIVALIIGSLLVIPLIPAVLTIPFQLLVQ 120
Query: 55 R----------------PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
L I++LG G P ++ +R+
Sbjct: 121 LAIVFLTAWQTYLFMTFTFLHHLPPVTRANIIVLGAGIYTEAVTPMLK--------ARLD 172
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ L + ++ II+SGG ++E++ L++ G+ I +E QS +T
Sbjct: 173 RAIALSRQLEKFH----IIVSGGQGPDEPISEALAMQRYLIQQGIAPKQITMEDQSTNTR 228
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
QN +S + Q + I+V+S++H+ R+ + ++ + + +
Sbjct: 229 QNIYYSKHYLALHQQPHTIIVTSSFHILRALRLAERQQLHAFGYGAPTPHHW-------- 280
Query: 219 NFYLTELALKEYIGILIAY 237
++ +++Y G+L Y
Sbjct: 281 ---VSRELIRDYSGLLFQY 296
>gi|206564007|ref|YP_002234770.1| hypothetical protein BCAM2170 [Burkholderia cenocepacia J2315]
gi|198040047|emb|CAR56028.1| putative exported protein [Burkholderia cenocepacia J2315]
Length = 219
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 67/178 (37%), Gaps = 20/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ V+ GN P +R+ +R Y++ + C + G
Sbjct: 39 PSDPADVAVIFGNALDE-------TGAPKPVLAARLDVGVRCYRAGQ-----CPAFLVSG 86
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
GL E+ + L+ GV D I ++ Q +T AQ + + ++ + +++VS
Sbjct: 87 AIDGPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLRTHRLSRVLIVSQ 146
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R++L F+ GI + Y P + + +E + R
Sbjct: 147 YYHLARARLAFERVGIARSTISAAY--------PRRFQWRDVYSSWREVPAYAVYAVR 196
>gi|291296072|ref|YP_003507470.1| hypothetical protein Mrub_1689 [Meiothermus ruber DSM 1279]
gi|290471031|gb|ADD28450.1| protein of unknown function DUF218 [Meiothermus ruber DSM 1279]
Length = 176
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 28/175 (16%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L+F +G P SP + + IV+LG EP
Sbjct: 6 ALVFVAVGLVFFS-------------PKASPGTLQKADWIVVLGAA--------QYNGEP 44
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S +R+ +RLY+ I ++GG +E V + L GV +
Sbjct: 45 SVIFRNRLEAALRLYQQG----YAPRIAVTGGRAPGDRYSEGGVGCSYLEAKGVPPAALY 100
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
E QS T +N + ++ + I+V+ HL R+ + + G+
Sbjct: 101 CEQQSRRTVENLTNIAPVVGKSRL---IIVTDEPHLPRALILAEQLGLQATGFAV 152
>gi|166714094|ref|ZP_02245301.1| hypothetical protein Xoryp_22305 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 205
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 68/199 (34%), Gaps = 16/199 (8%)
Query: 33 FSFIGWGI---IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
GWG +P ++ + + ++I++LG A P
Sbjct: 12 LGLFGWGWRLCMPALIWLVAVTGWIVWIGDRDQAAPADVIIVLGAA--------AYDARP 63
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY ++ +GG AES V L G+ + I
Sbjct: 64 SPVFEERIRHALDLYAQG----YAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIV 119
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ET S T QN + + ++++ I+VS H+ R+ Q GI+ AS +
Sbjct: 120 IETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMARALRLSQELGIDALASSTP-STR 178
Query: 210 YYSIIPLSANFYLTELALK 228
+ S
Sbjct: 179 FRSFHTSWRFLLQEVYYFH 197
>gi|32034567|ref|ZP_00134723.1| COG2949: Uncharacterized membrane protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207926|ref|YP_001053151.1| SanA protein [Actinobacillus pleuropneumoniae L20]
gi|126096718|gb|ABN73546.1| SanA protein [Actinobacillus pleuropneumoniae serovar 5b str. L20]
Length = 229
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 70/222 (31%), Gaps = 28/222 (12%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
C SI + F ++F + + + V+L
Sbjct: 15 LWKRCLSICPRIALVSFAIVFLLSITVFVIDYATGI--YVKDNIYTDIEKLPKHRNAVVL 72
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G P + + R+ ++L K ++ GD + E
Sbjct: 73 GTSKFYAKGTPNLYYKY------RLEAAVQLINKGKAKK-----LLVSGDNKTPYYNEPK 121
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V N L G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 122 VMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERALFIA 178
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ IN + Y + + L+E++ +
Sbjct: 179 KYHNINAVCFAAKYPEGHIKVR------------LREFLARI 208
>gi|196232487|ref|ZP_03131340.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196223559|gb|EDY18076.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 193
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 81/216 (37%), Gaps = 35/216 (16%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+++F +L F +G ++ L+ ++ ++LG+
Sbjct: 8 KRLFLSLVAVLGFLHLGTIVLVIAGLR-------------DDLGHADVGLVLGSKVETN- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS + +R+ T+ Y++ + II G K G E+IV + L+
Sbjct: 54 ------GTPSTRLRARLDRTLECYRAG-----YFPEIIVSGGIGKEGYDEAIVMRDYLVA 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ + I L+ + + TF +A+ + + + ++ ++S +HL R++L FG
Sbjct: 103 HGLPGEHILLDNKGVTTFASARNTRDIAQQRNFHSVFVISQYFHLPRARLALHRFGF--- 159
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
YS A +E G L
Sbjct: 160 -------TTVYSAHAQYFELRDIYSAPRELFGYLSY 188
>gi|314934418|ref|ZP_07841777.1| putative membrane protein [Staphylococcus caprae C87]
gi|313652348|gb|EFS16111.1| putative membrane protein [Staphylococcus caprae C87]
Length = 320
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 100/263 (38%), Gaps = 48/263 (18%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFM----LLFSFIGWGIIPTI------------ 44
ML++ +F+++ + HL ++F F+ ++ I T+
Sbjct: 58 MLIASLFILIKHRHLFNFKRGRLFLKHMFIYLYRIILLLSACIYISTVEIPIINGLALWF 117
Query: 45 --------LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
S+ S K+ ++I++LG G P + R
Sbjct: 118 ATIAYSTTFAFICYISWSSAYGSHLCSKNVDLIMVLGAGIFTEEVTPML--------AER 169
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ +++Y+S K +++SGG + E++ L+ GV I +E QS +
Sbjct: 170 LNCAIKVYESQK---HSPYMLVSGGQGPDEPITEALAMKRYLIAKGVPEKRILMEAQSTN 226
Query: 157 TFQNAQFSSSMIKNMQGKNIIL--VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T+ N +S +I+ G+ V+S +H+ RS G+ S + Y
Sbjct: 227 TYTNFLYSKPIIEEHFGRRAQFLCVTSQFHILRSLRLANKVGLEFYGLGS---HTPYHFF 283
Query: 215 PLSANFYLTELALKEYIGILIAY 237
++ +K+++G++ Y
Sbjct: 284 SIA--------LIKDFLGLMYQY 298
>gi|153806679|ref|ZP_01959347.1| hypothetical protein BACCAC_00949 [Bacteroides caccae ATCC 43185]
gi|149131356|gb|EDM22562.1| hypothetical protein BACCAC_00949 [Bacteroides caccae ATCC 43185]
Length = 212
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 77/219 (35%), Gaps = 27/219 (12%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
RK+ +++ + + I I + K + Q+ N+ +LLG
Sbjct: 2 KRKLLYITLIITILCVISIIICNRRIKK---NASQKLYTEITETPKNNVGLLLGT----- 53
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + RIF T+ LYK+ K + I+ GD +K E L+
Sbjct: 54 -SPKLKNGNNNLYFDYRIFATLELYKAGKINY-----ILISGDNRKENYNEPEEMKKALM 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV I L+ T + + + + ++S +H +R+ + GIN
Sbjct: 108 QRGVPEKYIYLDYAGFRTLDSVVRAKEVFGQSRLT---IISQRFHNERAIYLAEKNGINA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +NAY + ++E + +
Sbjct: 165 IGYNAKDVNAYSGLKTN----------IRELFARVKMFI 193
>gi|282917710|ref|ZP_06325461.1| hypothetical protein SATG_02569 [Staphylococcus aureus subsp.
aureus D139]
gi|283767447|ref|ZP_06340362.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
gi|282318465|gb|EFB48824.1| hypothetical protein SATG_02569 [Staphylococcus aureus subsp.
aureus D139]
gi|283461326|gb|EFC08410.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
Length = 322
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 24/187 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + K+ +II++LG G P + +R+ + +Y+
Sbjct: 134 WTVSYRHRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS--- 182
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II+SGG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+
Sbjct: 183 ATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLY 242
Query: 173 GKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ + +V +S +H+ R+ Q G++ S Y+ + + +K+Y
Sbjct: 243 HEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDY 291
Query: 231 IGILIAY 237
+G++ Y
Sbjct: 292 LGVMYQY 298
>gi|258442759|ref|ZP_05691319.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|282893804|ref|ZP_06302036.1| hypothetical protein SGAG_01156 [Staphylococcus aureus A8117]
gi|257851880|gb|EEV75814.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|282763862|gb|EFC03990.1| hypothetical protein SGAG_01156 [Staphylococcus aureus A8117]
Length = 322
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + K+ +II++LG G P + +R+ + +Y+
Sbjct: 134 WTVSYRHRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS--- 182
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II+SGG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N+
Sbjct: 183 ATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLY 242
Query: 173 GKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ + +V +S +H+ R+ Q G++ S Y+ + + +K+Y
Sbjct: 243 HEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDY 291
Query: 231 IGILIAY 237
+G++ Y
Sbjct: 292 LGVMYQY 298
>gi|291556404|emb|CBL33521.1| Uncharacterized conserved protein [Eubacterium siraeum V10Sc8a]
Length = 262
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 80/239 (33%), Gaps = 30/239 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + I + + ++++ + I L +
Sbjct: 52 VTVLLGIFTPKLFSNAKKAVRYIFRAVLIIYGVLAVYAI------TLSAFMIANMNDAPE 105
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K +++LG PS R+ S I+SGG
Sbjct: 106 KDGSRTVIVLGCQVRRDG--------PSLMLRRRLDAA----CSYLSTDTKADCIVSGGK 153
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVSS 181
++E+ L+ G+ I E +S T++N FS ++++ + I +V+
Sbjct: 154 GDNEHISEAEAMYEALVNDGISESRITKEDKSSSTYENLLFSKQILEDSEKPLRIAIVTD 213
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H R++L + G + K + + ++P+ ++E+ + + G
Sbjct: 214 GFHQWRARLQAESLGYDVKCVSA---ATPWYLVPV--------YWVREWFALSYLFVFG 261
>gi|227519414|ref|ZP_03949463.1| conserved hypothetical protein [Enterococcus faecalis TX0104]
gi|227073121|gb|EEI11084.1| conserved hypothetical protein [Enterococcus faecalis TX0104]
Length = 193
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL GI+ + D N ++ L
Sbjct: 143 SDFHMYRSQLLANRAGISNVSGITAASSFPKDIKNFGRELLSLGYAL 189
>gi|325917198|ref|ZP_08179425.1| hypothetical protein XVE_3418 [Xanthomonas vesicatoria ATCC 35937]
gi|325536588|gb|EGD08357.1| hypothetical protein XVE_3418 [Xanthomonas vesicatoria ATCC 35937]
Length = 183
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 13/186 (6%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
++ ++ + ++I++LG A PS RI +
Sbjct: 3 ALIWLVAVAAWIVWVGDRDQAAPADVIIVLGAA--------AYDARPSPVFEERIRHALD 54
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
LY ++ +GG AES V L GV + I +ET S T QN
Sbjct: 55 LYGQG----YAPRLLFTGGFGNGARFAESQVARRYALRHGVPPEAIVIETSSRTTRQNLL 110
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL 222
+ ++++ I+VS H+ R+ Q G++ AS + + S
Sbjct: 111 QARALMERHGMHRAIIVSDPLHMARALRLCQELGVDALASSTP-STRFRSFHTSWRFLLQ 169
Query: 223 TELALK 228
Sbjct: 170 EVYFFH 175
>gi|300860463|ref|ZP_07106550.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307276161|ref|ZP_07557292.1| hypothetical protein HMPREF9521_01790 [Enterococcus faecalis
TX2134]
gi|300849502|gb|EFK77252.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306507155|gb|EFM76294.1| hypothetical protein HMPREF9521_01790 [Enterococcus faecalis
TX2134]
Length = 193
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N + L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITAASSFPKDIKNFGRELFSLGYAL 189
>gi|226941137|ref|YP_002796211.1| transmembrane protein [Laribacter hongkongensis HLHK9]
gi|226716064|gb|ACO75202.1| Probable transmembrane protein [Laribacter hongkongensis HLHK9]
Length = 253
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 13/168 (7%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
+ L + L+ + + IV+LG G S + R+
Sbjct: 58 PVTAGWLNRTLEAH----VAVLPPDARFDAIVVLGGGKRPQAVEFGG-DTVSADTLLRLR 112
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
RL + + ++ G G E+++ L E V +E+ SL T
Sbjct: 113 YAARLARQSGKP------VLVTGGAPLGGPPEAVLMAAALAEWQVSAR--WVESASLTTA 164
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
NA+ S+ +++ + I LVS A+HL R+ F+ G+ + + +
Sbjct: 165 DNARLSAGLLRQAGVQRIALVSQAWHLPRAIRAFERQGLTVLPAPTAF 212
>gi|331082614|ref|ZP_08331737.1| hypothetical protein HMPREF0992_00661 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400233|gb|EGG79875.1| hypothetical protein HMPREF0992_00661 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 250
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 94/246 (38%), Gaps = 32/246 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLSPQ 61
++L++ L S I+F + FS + LL + Y + +
Sbjct: 29 FPLVWLLIGGGFFLAGSC--IYFGIEIPVWFSGFIGIFLGGFLLLLVFTEYLIISAMKQK 86
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ + IV+LG +++ RI + + + + ++SGG
Sbjct: 87 EVRNLDYIVVLGAQVNGKIPSKSLQY--------RIDRA----EKYLRENENTKAVLSGG 134
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-----KNMQGKNI 176
+ G++E+ +L+ GV + LE +S +T QN F+ +I KN++ I
Sbjct: 135 KGEDEGISEAQCMAEELVRKGVASKRLLLEAKSRNTEQNIAFTIPIIQQDSKKNLKELKI 194
Query: 177 ILVSSAYHLKRSQLYF-QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+V++ +H+ RS + + ++ F L+E+ G++
Sbjct: 195 GIVTNGFHIYRSSRIAQKKMQCKVYGIAA-----------KNSRFLQVNYLLREFFGVIK 243
Query: 236 AYYRGN 241
GN
Sbjct: 244 DRLVGN 249
>gi|229829927|ref|ZP_04455996.1| hypothetical protein GCWU000342_02033 [Shuttleworthia satelles DSM
14600]
gi|229791225|gb|EEP27339.1| hypothetical protein GCWU000342_02033 [Shuttleworthia satelles DSM
14600]
Length = 342
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/241 (18%), Positives = 93/241 (38%), Gaps = 33/241 (13%)
Query: 1 MLLSWIFLIVSYW----HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
++ ++ +I+ Q+ F F+ + G+ +L Y
Sbjct: 103 LIFAFFGVILIRAYGSNLYFYQNHWINIFFIFFVYSYLIFGFAFAGFML-------YSIL 155
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L +K + I++ G G + RI + + YK K ++ + +
Sbjct: 156 YLLIPKRKHYDFIIIHGAGLLDGE-------RVTPLLKRRIDKAVEAYK--KSNNPNMKL 206
Query: 117 IISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I SGG ++E+ N LLE + ++ + LE QS T++N FS + + + +
Sbjct: 207 IASGGQGPDEKISEAQAILNYLLEETDIPKEAVLLEDQSKTTYENLLFSKRIGEKLVDQP 266
Query: 176 II-LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
V++ YH+ R+ Y + GI +A +Y+ ++E+I +
Sbjct: 267 RFLFVTNDYHVFRTSTYAKKIGIKGDGLGC-----------STAGYYIPSAFIREFIALC 315
Query: 235 I 235
+
Sbjct: 316 V 316
>gi|291529907|emb|CBK95492.1| Uncharacterized conserved protein [Eubacterium siraeum 70/3]
Length = 262
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 81/239 (33%), Gaps = 30/239 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + I + + ++++ + I L +
Sbjct: 52 VTVLLGIFTPKLFSNAKKAVRYIFRAVLIIYGVLAVYAI------TLSAFMIANMNDAPE 105
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K +++LG PS R+ S I+SGG
Sbjct: 106 KDGSRTVIVLGCQVRRDG--------PSLMLRRRLDAA----CSYLSADTKADCIVSGGK 153
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSS 181
++E+ L+ G+ + I E +S T++N FS ++++ + I +V+
Sbjct: 154 GDNEHISEAEAMYEALVNDGISENRITKEDKSSSTYENLLFSKQILEDSGKPLRIAIVTD 213
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H R++L + G + K + + ++P+ ++E+ + + G
Sbjct: 214 GFHQWRARLQAESLGYDVKCVSA---ATPWYLVPV--------YWVREWFALSYLFVFG 261
>gi|255971798|ref|ZP_05422384.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|312951115|ref|ZP_07770020.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|255962816|gb|EET95292.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|310630891|gb|EFQ14174.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|315154145|gb|EFT98161.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315158992|gb|EFU03009.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|323481728|gb|ADX81167.1| conserved hypothetical protein [Enterococcus faecalis 62]
Length = 193
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LYFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N + L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITAASSFPKDIKNFGRELFSLGYAL 189
>gi|256958084|ref|ZP_05562255.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256948580|gb|EEU65212.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|315036298|gb|EFT48230.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
Length = 193
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKQHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N + L
Sbjct: 143 SDFHMYRSQLLAKRAGISNASGITAASSFPKDIKNFGRELFSLGYAL 189
>gi|94264714|ref|ZP_01288494.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93454823|gb|EAT05073.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 78
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIG 232
LV+SA H+ RS F+ GIN + +D+ ++P + + + + ALKEY+G
Sbjct: 9 LVTSAQHMPRSLATFRAVGINAVPAPADFEVIPQPLHPLRLLPDAHSLHQSTSALKEYLG 68
Query: 233 ILIAYYRG 240
+L+ RG
Sbjct: 69 LLVYRLRG 76
>gi|322615919|gb|EFY12836.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620704|gb|EFY17564.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623945|gb|EFY20782.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627393|gb|EFY24184.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322630700|gb|EFY27464.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638080|gb|EFY34781.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640566|gb|EFY37217.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647705|gb|EFY44190.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648055|gb|EFY44522.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656912|gb|EFY53198.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657377|gb|EFY53649.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663697|gb|EFY59897.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666530|gb|EFY62708.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672311|gb|EFY68423.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676377|gb|EFY72448.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679530|gb|EFY75575.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686141|gb|EFY82125.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323194985|gb|EFZ80171.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200106|gb|EFZ85193.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201073|gb|EFZ86142.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209470|gb|EFZ94403.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212278|gb|EFZ97102.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216583|gb|EGA01309.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222478|gb|EGA06848.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225789|gb|EGA10009.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228670|gb|EGA12799.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236716|gb|EGA20792.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239783|gb|EGA23830.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242169|gb|EGA26198.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249406|gb|EGA33322.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252259|gb|EGA36110.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256650|gb|EGA40380.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261316|gb|EGA44903.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265504|gb|EGA49000.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323271708|gb|EGA55126.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 206
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + I + + + + ++ G G +
Sbjct: 2 KYRYITRIAAGIILIMATVFINNAIAIY-------QFSQQDQTRVADCAIVAGAGVSGK- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 54 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 162
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 163 SSPTRSTRYKSWW-------AQTRFLLRETFYYSGYRL 193
>gi|313669320|ref|YP_004049604.1| periplasmic protein [Neisseria lactamica ST-640]
gi|313006782|emb|CBN88252.1| putative periplasmic protein [Neisseria lactamica 020-06]
Length = 218
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L F + + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAV----YRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q II +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFQERINHAIALY----QSRRVGKIIFTGGRSKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ G+ +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGIPPRNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEIAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|325133332|gb|EGC55998.1| hypothetical protein NMBM13399_2155 [Neisseria meningitidis M13399]
Length = 218
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L + + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCL----SVFPLLLVFTSSVWAVYRTGGQVLPPHVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q II +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIIFTGGRSKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|218897246|ref|YP_002445657.1| hypothetical protein BCG9842_B3064 [Bacillus cereus G9842]
gi|228939435|ref|ZP_04102023.1| hypothetical protein bthur0008_20940 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228965253|ref|ZP_04126347.1| hypothetical protein bthur0004_20910 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228972289|ref|ZP_04132901.1| hypothetical protein bthur0003_20630 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978903|ref|ZP_04139269.1| hypothetical protein bthur0002_21040 [Bacillus thuringiensis Bt407]
gi|218541132|gb|ACK93526.1| conserved hypothetical protein [Bacillus cereus G9842]
gi|228780777|gb|EEM28989.1| hypothetical protein bthur0002_21040 [Bacillus thuringiensis Bt407]
gi|228787434|gb|EEM35401.1| hypothetical protein bthur0003_20630 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228794487|gb|EEM41999.1| hypothetical protein bthur0004_20910 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228820135|gb|EEM66172.1| hypothetical protein bthur0008_20940 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 178
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS +R+ + S + +I+SGG + + E+ N L+ G++
Sbjct: 42 DRPSLSLQNRLDVALEYLFSHPE----AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDES 97
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I +E QS +T++N +FS + ++VS+ YHL R+++ + G+ +A ++
Sbjct: 98 RILIEDQSTNTYENLKFSMDLYNVKH---AVVVSNTYHLYRTKIIAKRLGMKMEALAAET 154
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++EY I+
Sbjct: 155 PIRSKR-----------KMYVREYAAIMK 172
>gi|82751953|ref|YP_417694.1| hypothetical protein SAB2237 [Staphylococcus aureus RF122]
gi|258425099|ref|ZP_05687970.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|82657484|emb|CAI81926.1| probable membrane protein [Staphylococcus aureus RF122]
gi|257844933|gb|EEV68976.1| conserved hypothetical protein [Staphylococcus aureus A9635]
Length = 322
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 24/187 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + K+ +II++LG G P + +R+ + +Y+
Sbjct: 134 WTVSYRHRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS--- 182
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II+SGG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+
Sbjct: 183 ATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLY 242
Query: 173 GKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ + +V +S +H+ R+ Q G++ S Y+ + + +K+Y
Sbjct: 243 HEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDY 291
Query: 231 IGILIAY 237
+G++ Y
Sbjct: 292 LGVMYQY 298
>gi|323443681|gb|EGB01294.1| hypothetical protein SAO46_0340 [Staphylococcus aureus O46]
Length = 322
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 83/187 (44%), Gaps = 24/187 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + K+ +II++LG G P + +R+ + +Y+
Sbjct: 134 WTVSYRHRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS--- 182
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II+SGG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+
Sbjct: 183 ATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLY 242
Query: 173 GKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
K + +V +S +H+ R+ Q G++ S Y+ + + +K+Y
Sbjct: 243 HKAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDY 291
Query: 231 IGILIAY 237
+G++ Y
Sbjct: 292 LGVMYQY 298
>gi|325685025|gb|EGD27163.1| hypothetical protein HMPREF5505_1175 [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 366
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 94/241 (39%), Gaps = 34/241 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF--MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
ML W+F+ + ++ + ++ + + + + + +LL +
Sbjct: 125 MLGLWVFIFIGHFTRSTPTGLRLILDIFPTVAVYLAAVMYNFLVNLLLYQI--------- 175
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTII 117
+ N +++LG G + S +RI ++ Y ++ I
Sbjct: 176 -VPRRYQQNYLIVLGAGLIHGD-------QISNIQAARINRAIQFAYHQQEKGQPLPKFI 227
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI- 176
+SGG ++E+ ++ GV ++ I LE QS +T QN +FS + N G +
Sbjct: 228 MSGGQGPNEKISEAAAMAAYAIKRGVPKELILLEDQSRNTEQNMEFSQIVAYNDYGNDNF 287
Query: 177 --ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S YH+ RS +Y + G++ S +YL L+E+ G+
Sbjct: 288 KACFFTSNYHVFRSAIYAKRAGLDANGIGSYTRP-----------YYLPNAVLREFAGMF 336
Query: 235 I 235
+
Sbjct: 337 V 337
>gi|325283041|ref|YP_004255582.1| hypothetical protein Deipr_0809 [Deinococcus proteolyticus MRP]
gi|324314850|gb|ADY25965.1| protein of unknown function DUF218 [Deinococcus proteolyticus MRP]
Length = 265
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 68/226 (30%), Gaps = 17/226 (7%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
++ + +L + + ++P L + P + I++LG
Sbjct: 54 WRPGRAALWAGLGTVALLYGAALFTPLVPRALTALTEAQAPAP---------ADAIIVLG 104
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + S +R+ L+++ ++ + S S +
Sbjct: 105 GGLSCA------EGSLEPASAARLSRGTDLWRAGYADTLVFS-SQSDALTPPECPRMSDL 157
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+L I DT A+ ++ + + ++LV+S H R+ F+
Sbjct: 158 QAAQLRRWFDRPPRILTLRGVTDTADEARQAARLEAEYGWRRVLLVTSPSHSARAAALFR 217
Query: 194 H-FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ ++ S + + L E + + A
Sbjct: 218 RELSAEVLSVPAEEWRFSLSGETAQSRLAGLNVVLYEALSRVKARL 263
>gi|325127259|gb|EGC50197.1| hypothetical protein NMXN1568_2007 [Neisseria meningitidis N1568]
Length = 214
Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 12/190 (6%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + + ++L + + + + Y+ + ++LG
Sbjct: 1 MKKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA 60
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS RI + LY Q II +GG +K + E+ V
Sbjct: 61 AAWDK--------RPSPVFRERINHAIALY----QSRRVGKIIFTGGRSKKGYMTEAEVG 108
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 109 RRYALKQGIPPRNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAED 168
Query: 195 FGINTKASCS 204
G+ S +
Sbjct: 169 LGVRVYMSAT 178
>gi|223042665|ref|ZP_03612714.1| membrane protein [Staphylococcus capitis SK14]
gi|222444328|gb|EEE50424.1| membrane protein [Staphylococcus capitis SK14]
Length = 320
Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 104/266 (39%), Gaps = 54/266 (20%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFM---------------------------LLF 33
ML++ +F+++ + HL ++F F+ L F
Sbjct: 58 MLIASLFILIKHRHLFNFKRGRLFLKHMFIYLYRIMLFLSACIYISTVDIPIINGLALWF 117
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ I + I + S+ S + K+ ++I++LG G P +
Sbjct: 118 ATIAYSTIFAFICYI---SWSSAYGSHLFSKNVDLIMVLGAGIFTEEVTPML-------- 166
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ +++Y+S K +++SGG + E++ L+ GV I +E Q
Sbjct: 167 AERLNCAIKVYESQK---HSPYMLVSGGQGPDEPITEALAMKRYLIAKGVPEKRILMEEQ 223
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIIL--VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
S +T+ N Q+S +I+ G+ V+S +H+ RS G+ S + Y
Sbjct: 224 STNTYTNFQYSKPIIEKHFGRRAQFLCVTSQFHILRSLRLANKVGLEFYGLGS---HTPY 280
Query: 212 SIIPLSANFYLTELALKEYIGILIAY 237
++ +K+++G++ Y
Sbjct: 281 HFFSIA--------LIKDFLGLMYQY 298
>gi|325135386|gb|EGC58007.1| periplasmic protein [Neisseria meningitidis M0579]
gi|325201201|gb|ADY96655.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
gi|325207058|gb|ADZ02510.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
Length = 214
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCL----SVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|295134706|ref|YP_003585382.1| hypothetical protein ZPR_2866 [Zunongwangia profunda SM-A87]
gi|294982721|gb|ADF53186.1| secreted protein containing DUF218 [Zunongwangia profunda SM-A87]
Length = 209
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 18/190 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++K + +++ + + + + R ++LG
Sbjct: 2 RFLKKSILYTVILIVLGIFITLGLEAFIKQDI---ASRMYAEINEVPSAKTAIVLGASVH 58
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ S R+ + L K K I+ GD E N
Sbjct: 59 SD-------GKLSPILQDRVDTAIDLLKHHKVEE-----ILISGDHGSDDYNEVDAIANY 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L E+G+ D + L+ DT+ + +S + K+ I+++ +HL R+ +H G+
Sbjct: 107 LTENGIPSDILILDHAGFDTYDSMYRASKVFN---IKDAIVITQQFHLPRALFIAKHLGL 163
Query: 198 NTKASCSDYL 207
+ +
Sbjct: 164 DYYGFEAKER 173
>gi|49484573|ref|YP_041797.1| hypothetical protein SAR2444 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257423840|ref|ZP_05600269.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426523|ref|ZP_05602925.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429159|ref|ZP_05605546.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257431805|ref|ZP_05608168.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257434765|ref|ZP_05610816.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282902270|ref|ZP_06310163.1| putative membrane protein [Staphylococcus aureus subsp. aureus
C160]
gi|282906699|ref|ZP_06314547.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909675|ref|ZP_06317484.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911921|ref|ZP_06319717.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282915217|ref|ZP_06322994.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M899]
gi|282920941|ref|ZP_06328659.1| hypothetical protein SASG_01122 [Staphylococcus aureus subsp.
aureus C427]
gi|282925847|ref|ZP_06333495.1| hypothetical protein SARG_01174 [Staphylococcus aureus subsp.
aureus C101]
gi|283959139|ref|ZP_06376580.1| putative membrane protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293497613|ref|ZP_06665467.1| hypothetical protein SCAG_00186 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511192|ref|ZP_06669888.1| membrane protein [Staphylococcus aureus subsp. aureus M809]
gi|293549800|ref|ZP_06672472.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M1015]
gi|295428939|ref|ZP_06821563.1| hypothetical protein SIAG_02182 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589565|ref|ZP_06948206.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|49242702|emb|CAG41426.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272858|gb|EEV04960.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276154|gb|EEV07605.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279640|gb|EEV10227.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282684|gb|EEV12816.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285361|gb|EEV15477.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282312676|gb|EFB43080.1| hypothetical protein SARG_01174 [Staphylococcus aureus subsp.
aureus C101]
gi|282315356|gb|EFB45740.1| hypothetical protein SASG_01122 [Staphylococcus aureus subsp.
aureus C427]
gi|282320938|gb|EFB51272.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M899]
gi|282323617|gb|EFB53933.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326249|gb|EFB56553.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329598|gb|EFB59119.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596729|gb|EFC01688.1| putative membrane protein [Staphylococcus aureus subsp. aureus
C160]
gi|283788731|gb|EFC27558.1| putative membrane protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290918847|gb|EFD95923.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M1015]
gi|291096544|gb|EFE26802.1| hypothetical protein SCAG_00186 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291465818|gb|EFF08348.1| membrane protein [Staphylococcus aureus subsp. aureus M809]
gi|295127288|gb|EFG56930.1| hypothetical protein SIAG_02182 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297578076|gb|EFH96789.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|312437225|gb|ADQ76296.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH60]
gi|315193624|gb|EFU24020.1| hypothetical protein CGSSa00_14298 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 322
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + + K+ +II++LG G P + +R+ + +Y+
Sbjct: 134 WTVSYRNRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS--- 182
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II+SGG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+
Sbjct: 183 ATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLY 242
Query: 173 GKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ + +V +S +H+ R+ Q G++ S Y+ + + +K+Y
Sbjct: 243 HEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDY 291
Query: 231 IGILIAY 237
+G++ Y
Sbjct: 292 LGVMYQY 298
>gi|329118151|ref|ZP_08246863.1| protein of hypothetical function DUF218 [Neisseria bacilliformis
ATCC BAA-1200]
gi|327465811|gb|EGF12084.1| protein of hypothetical function DUF218 [Neisseria bacilliformis
ATCC BAA-1200]
Length = 222
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 82/222 (36%), Gaps = 19/222 (8%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R+ + + I ++ + Y+ G+ V+LG
Sbjct: 5 KRFFRRPHILWGSLWRGFAISVALVLLFFVWCAWSVYRTGRDGLPQGYTGDAAVVLGAAA 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS RI + LY+S + ++ +GG +K ++E V
Sbjct: 65 WDA--------RPSPVFRERINHAVGLYRSGRVR----KLVFTGGAVKKGYMSEGEVGRR 112
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV +DI LE +S T++N + + ++ + I++VS HL R+ + G
Sbjct: 113 YALKQGVPAEDILLENKSRTTYENLAYLRAPLREAGLRKIVIVSDPPHLARAAAVARDLG 172
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ + S + + + L+E + + Y
Sbjct: 173 LDAQVSPTPTTRY-------AEGGSRFKFQLRETVLLAGYYL 207
>gi|115374286|ref|ZP_01461571.1| SanA protein [Stigmatella aurantiaca DW4/3-1]
gi|115368707|gb|EAU67657.1| SanA protein [Stigmatella aurantiaca DW4/3-1]
Length = 212
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 67/209 (32%), Gaps = 23/209 (11%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+R+ LL L + +Q Y +L Q + + ++ G G
Sbjct: 10 WMRRGVLAGALSLLGVLA--------LSRFVQVRYADRILPRQGAPEAPMALVFGAGLAP 61
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS R+ + L++ K ++ GD E+ L
Sbjct: 62 G-------GVPSPVLAQRLDTAIALWREKKVGG-----VLVSGDNSDRFHDETRAMRRYL 109
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
LE G+ ++ + L T+ + + + + +LV+ +HL R+ G++
Sbjct: 110 LERGLPETAVQGDNSGLSTYDSCVRAYDVFGMRR---ALLVTQRFHLPRALYIANSVGMD 166
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELAL 227
+D + L F +
Sbjct: 167 AWGVAADEGHPSTQRYVLRETFSRVLALI 195
>gi|257467698|ref|ZP_05631794.1| hypothetical protein FulcA4_00092 [Fusobacterium ulcerans ATCC
49185]
gi|317061992|ref|ZP_07926477.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313687668|gb|EFS24503.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 244
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 86/260 (33%), Gaps = 58/260 (22%)
Query: 3 LSWIFLIVS-YWHLLCQSIRKIFFMSCFMLL--------------------------FSF 35
+ IFL + R +F +++ F
Sbjct: 7 IILIFLFICSLLVKSSFGFRFLFLFYASLIIYKNIVLKADKNKFFKFLKKICKLGYCLFF 66
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ I+ I+LK + L++ +++LG G ++
Sbjct: 67 FSFIIVEGIILKDI-------LVNRNNSPKVKYLIVLGAGLKGDIPSEVLKY-------- 111
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + ++ +K I+SGG + ++E+ L E G+ +I E +S
Sbjct: 112 RLNKAVKYFKENP----DTIFIVSGGQGKDELISEAEAMEIYLSERGIPIKNIIKEDKST 167
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVS-SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T++N +FS +IK + I V +++H+ R ++ + K ++
Sbjct: 168 STYENLKFSDKIIKEKEITGDIAVMFNSFHMYRVKMISKKLNFPLKTVYAETP------- 220
Query: 215 PLSANFYLTELALKEYIGIL 234
L+EY
Sbjct: 221 ----AIVFPNYMLREYFAFF 236
>gi|94264712|ref|ZP_01288492.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93454821|gb|EAT05071.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 96
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALK 228
++LV+SA H+ RS F+ GIN + +D+ ++P + + + + ALK
Sbjct: 23 HPVLLVTSAQHMPRSLATFRAVGINAVPAPTDFEVIPQPLHPLRLLPDAHSLHQSTSALK 82
Query: 229 EYIGILIAYYRG 240
EY+G+L+ RG
Sbjct: 83 EYLGLLVYRLRG 94
>gi|240949339|ref|ZP_04753682.1| SanA protein [Actinobacillus minor NM305]
gi|240296290|gb|EER46939.1| SanA protein [Actinobacillus minor NM305]
Length = 231
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/236 (16%), Positives = 79/236 (33%), Gaps = 35/236 (14%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ W +S K + + +G I +K R D +
Sbjct: 13 IKKWGTCGRSFIKWSVGGFVFFILALLGIDFITGYSVK------DRIYTDINKLPDYHTA 66
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG +P + + R+ +L K + ++ GD Q
Sbjct: 67 VVLGTAKFYSKGVPNLYYQY------RVEAASQLVKEHQIKH-----LLVSGDNQTPYYN 115
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V LL+ GV ++ I+ + T + ++ + K I++S +H +R+
Sbjct: 116 EPKVMTEDLLKMGVPKNIIQQDFAGYRTLDSVIRANKVFK---LAPFIIISQQFHCERAL 172
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAYYRGNR 242
+ I+ + Y ++ ++E+ IG++ Y N+
Sbjct: 173 FIAKTQNIDAVCLVAKYPEG------------HVKVRIREFFARIGMIWDYIVNNQ 216
>gi|167750336|ref|ZP_02422463.1| hypothetical protein EUBSIR_01310 [Eubacterium siraeum DSM 15702]
gi|167656696|gb|EDS00826.1| hypothetical protein EUBSIR_01310 [Eubacterium siraeum DSM 15702]
Length = 234
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 80/239 (33%), Gaps = 30/239 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + I + + ++++ + I L +
Sbjct: 24 VTVLLGIFTPKLFSNAKKAVRYIFRAVLIIYGVLAVYAI------TLSAFMIANMNDAPE 77
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K +++LG PS R+ S I+SGG
Sbjct: 78 KDGSRTVIVLGCQVRRDG--------PSLMLRRRLDAA----CSYLSTDTKADCIVSGGK 125
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSS 181
++E+ L+ G+ I E +S T++N FS ++++ + I +V+
Sbjct: 126 GDNEHISEAEAMYEALVNDGISESRISKEDKSSSTYENLLFSKQILEDSGKPLRIAIVTD 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H R++L + G + K + + ++P+ ++E+ + + G
Sbjct: 186 GFHQWRARLQAESLGYDVKCVSA---ATPWYLVPV--------YWVREWFALSYLFVFG 233
>gi|90410373|ref|ZP_01218389.1| Putative SanA protein [Photobacterium profundum 3TCK]
gi|90328614|gb|EAS44898.1| Putative SanA protein [Photobacterium profundum 3TCK]
Length = 226
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 64/207 (30%), Gaps = 27/207 (13%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+L + ++ + + R +I ++LG I T+
Sbjct: 9 FFAVLCIILVSTSLLIDRWVSA--STSDRIFYDVSHIPSRSIGLVLGTSKYIAKTLNPYY 66
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
R+ + LY+ K + + + GD E LL+SG+
Sbjct: 67 SY-------RMEAALELYQQGKIN-----VFLLSGDNAHRSYNEPWTMKRDLLKSGIPDS 114
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
DI L+ T + + + + +++ +H +R+ + I+
Sbjct: 115 DIVLDYAGFRTLDSVVRAKEVFEADHFV---IITQKFHCERALFIAESNNIDAICLAV-- 169
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGI 233
P F ++ L+E +
Sbjct: 170 --------PEPRGFAGFKIRLREVLAR 188
>gi|150016674|ref|YP_001308928.1| hypothetical protein Cbei_1801 [Clostridium beijerinckii NCIMB
8052]
gi|149903139|gb|ABR33972.1| protein of unknown function DUF218 [Clostridium beijerinckii NCIMB
8052]
Length = 251
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 86/239 (35%), Gaps = 33/239 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L +I + +S + I+ + + IG L
Sbjct: 36 ILGVTLIIYHFIKRRIESNKFIYRYFRVLKVLICIGGIFF-------LGIEIFIINYPKY 88
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + + I++LG G PS R+ + Q + I++SGG
Sbjct: 89 NKGNADYIIVLGAGLDTNSN-------PSLILQGRLDAALE----YIQEDDYRFIVLSGG 137
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-----NI 176
L ES LL GV+ + + +E S +T +N +FS + I+ GK NI
Sbjct: 138 QGSDEKLPESHAMKKYLLNRGVDEEKVIIEDNSRNTDENLKFSKAKIEENSGKSLDKLNI 197
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+V+S +H RS + + G + + +IP++ +E I+
Sbjct: 198 KIVTSDFHALRSSILAKRNG--YVNYSNYSSRTVWYLIPITYT--------REAFAIVK 246
>gi|257420188|ref|ZP_05597182.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|257162016|gb|EEU91976.1| conserved hypothetical protein [Enterococcus faecalis T11]
Length = 193
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 17/167 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKQHSET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANF 220
S +H+ RSQL + GI+ + D N ++ L
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGITAASSFPKDIKNFGRELLSLGYAL 189
>gi|15675952|ref|NP_273070.1| EpiH/GdmH-related protein [Neisseria meningitidis MC58]
gi|7225229|gb|AAF40483.1| EpiH/GdmH-related protein [Neisseria meningitidis MC58]
gi|316984529|gb|EFV63495.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325129274|gb|EGC52113.1| hypothetical protein NMBOX9930304_1979 [Neisseria meningitidis
OX99.30304]
gi|325139474|gb|EGC62014.1| periplasmic protein [Neisseria meningitidis CU385]
gi|325199239|gb|ADY94694.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
Length = 214
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L F + + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAV----YRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|315503734|ref|YP_004082621.1| hypothetical protein ML5_2953 [Micromonospora sp. L5]
gi|315410353|gb|ADU08470.1| protein of unknown function DUF218 [Micromonospora sp. L5]
Length = 211
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 58/181 (32%), Gaps = 19/181 (10%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ ++ T + + L + + ++LG
Sbjct: 1 MLATAAVMLLGAATVASATWVRGAAEGR----LFDAADVPETPVALVLGTKVEPD----- 51
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
P+ +R+ +LY + K +++ GD E L+E GV
Sbjct: 52 --GTPAPFLAARLEIARQLYAAGKVQ-----VLLLSGDHMDWDYDEPDAMRRWLVERGVP 104
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ L+ DT+ + + + + +V+ ++HL R+ + GI
Sbjct: 105 AEKTVLDHAGFDTYDSCVRAHRVFGVRR---ATVVTQSFHLPRAVALCRDAGIEAVGVGD 161
Query: 205 D 205
D
Sbjct: 162 D 162
>gi|256616694|ref|ZP_05473540.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256596221|gb|EEU15397.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|315033112|gb|EFT45044.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
Length = 193
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + K + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAIPYIKKHPET----PVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---LSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGI 197
S +H+ RSQL + GI
Sbjct: 143 SDFHMYRSQLLAKRAGI 159
>gi|227544579|ref|ZP_03974628.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A]
gi|300910291|ref|ZP_07127751.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
gi|227185458|gb|EEI65529.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A]
gi|300892939|gb|EFK86299.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
Length = 271
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 29/238 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL+ I ++ + LL + + S L + + + L +
Sbjct: 45 MLLNLIVVLPIFAFLL----KNLPIQSVSWLSSLVVATIDVLSTFNLILFCVFSCCTRLR 100
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++LG P + +R+ + + +C + II+SG
Sbjct: 101 KCPATVQGFLVLGAAVKHGQVPPVL--------ATRLDKAI----NCWKTHQSAKIIVSG 148
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G QK +E+ V L+ G+ I E ++L+T+QN F+S +IK + +++V+
Sbjct: 149 GIVQKAKESEAEVMAAYLIAHGIPARKIIRENKALNTWQNLAFASQLIKPQ--ETVVVVT 206
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S +H+ R++ Y + G+N S + PL+ +++Y+GI+ ++
Sbjct: 207 SDFHVLRARAYARKMGLNWSFISSK---TPWRYCPLT--------FIRDYLGIIRDHW 253
>gi|121635807|ref|YP_976052.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|120867513|emb|CAM11290.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|254672612|emb|CBA06344.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
gi|325131248|gb|EGC53960.1| hypothetical protein NMBM6190_2077 [Neisseria meningitidis M6190]
gi|325137422|gb|EGC60010.1| hypothetical protein NMBES14902_2053 [Neisseria meningitidis
ES14902]
Length = 218
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L F + + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAV----YRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|308388228|gb|ADO30548.1| putative periplasmic protein [Neisseria meningitidis alpha710]
Length = 214
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 12/190 (6%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + + ++L + + + + Y+ + ++LG
Sbjct: 1 MKKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA 60
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 61 AAWDK--------HPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEVG 108
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 109 RRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAED 168
Query: 195 FGINTKASCS 204
G+ S +
Sbjct: 169 LGVRVYMSAT 178
>gi|226309010|ref|YP_002768970.1| hypothetical protein RER_55230 [Rhodococcus erythropolis PR4]
gi|226188127|dbj|BAH36231.1| hypothetical protein RER_55230 [Rhodococcus erythropolis PR4]
Length = 242
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 12/143 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
G IV+LG G R+ ++L + Q II+
Sbjct: 106 DLNPVGTNIVVLGAGLFDD-------GTMRPMLVDRLQAALQLARQYPQSP-----IITS 153
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G K G+ E+ L+ +GV+ I E S T +NA S+ ++ + +++VS
Sbjct: 154 GGAPKAGVTEARAMREWLVANGVDPGRITEEGTSWSTVENALNSARILADRGATGVVVVS 213
Query: 181 SAYHLKRSQLYFQHFGINTKASC 203
SA H++R+ + F+ +
Sbjct: 214 SANHVERAMVDFRVAVLGRIPVA 236
>gi|153812550|ref|ZP_01965218.1| hypothetical protein RUMOBE_02949 [Ruminococcus obeum ATCC 29174]
gi|149831475|gb|EDM86563.1| hypothetical protein RUMOBE_02949 [Ruminococcus obeum ATCC 29174]
Length = 160
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 25/180 (13%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+++ + I++LG + R + + ++SGG
Sbjct: 4 RENLDYIIVLGAHVDG--------TRMTLALLERTRRALLYLEENPGTRA----VLSGGM 51
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ L E G++ + E +S +T +N +S +I + + +V++
Sbjct: 52 GDGERISEAEAMYRYLTEHGIDGGRLIREERSTNTKENLDYSLELIGSTEPAI-GVVTNN 110
Query: 183 YHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+H+ R + + G S Y + + L +E + I+ GN
Sbjct: 111 FHVFRGVMIGRKCGCREIYPVPSRYRS-----------WRLLLYIPREILAIIKDKIVGN 159
>gi|260101912|ref|ZP_05752149.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260084275|gb|EEW68395.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 367
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 83/237 (35%), Gaps = 28/237 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ I ++ + R + + + + ++ L+ L +
Sbjct: 121 VALILSLMFLFGSGQYLPRWLSVLLASIPAIAIYLGLVLYNFLINLLLYQ------IYPR 174
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +++LG G S +RI ++ Q III G
Sbjct: 175 RYKQDYLIVLGAGLINGD-------RVSKLLAARINRAIQYSNRQYQKGRKRPIIIMSGS 227
Query: 123 P-QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
+ E++ + G++ + + +E +S +T+QN FS + G +
Sbjct: 228 QGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSNFRSTF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ I
Sbjct: 288 FSNNYHIFRAALLAKEVGLKANGVGAF-----------TRLYYLPNAIIREFAGVFI 333
>gi|84621867|ref|YP_449239.1| hypothetical protein XOO_0210 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188574494|ref|YP_001911423.1| hypothetical protein PXO_03633 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58424447|gb|AAW73484.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84365807|dbj|BAE66965.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188518946|gb|ACD56891.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 205
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 63/199 (31%), Gaps = 16/199 (8%)
Query: 33 FSFIGWGI---IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+GWG +P ++ + + ++I++LG A P
Sbjct: 12 LGLLGWGWRLCMPALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAA--------AYDARP 63
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY + T G L G+ + I
Sbjct: 64 SPVFEERIRHALDLYAQGYAPRLLFTGGFGNGARFAESQV----ARRYALRHGIPPEAIV 119
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ET S T QN + + ++++ I+VS H+ R+ Q GI+ AS +
Sbjct: 120 IETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMARALRLSQELGIDALASSTP-STR 178
Query: 210 YYSIIPLSANFYLTELALK 228
+ S
Sbjct: 179 FRSFHTSWRFLLQELYYFH 197
>gi|229824294|ref|ZP_04450363.1| hypothetical protein GCWU000282_01599 [Catonella morbi ATCC 51271]
gi|229786267|gb|EEP22381.1| hypothetical protein GCWU000282_01599 [Catonella morbi ATCC 51271]
Length = 229
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 15/158 (9%)
Query: 47 KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS 106
Q + + + W D I++LG G EPS R+ + L ++
Sbjct: 31 AQFQTKTPQQIQATDWASDQVPILVLGAGIIDNK-------EPSKVLAGRLNSALTLAQT 83
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
+I GD E V + L++ GV + I L+ T+ +
Sbjct: 84 FPN-----KALIMSGDHTNQYYNEVAVMKDYLVQHGVASERIYLDHAGYSTYDSLYRLKH 138
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
++ + I+V+ YHL R+ + + G+ +
Sbjct: 139 VLGQNRV---IIVTQGYHLSRALMLARGLGLQAVGLAA 173
>gi|313609567|gb|EFR85104.1| integral membrane protein [Listeria monocytogenes FSL F2-208]
Length = 157
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 98 FETMRLY-KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ Y K + T I+SGG ++E+ + L+ G++ I +E QS++
Sbjct: 1 NRAIAFYEKQYSKTGKRATFIVSGGQGANETVSEAQAMRDYLISKGIDETFIIMEDQSVN 60
Query: 157 TFQNAQFSSSMIKNMQGKNIILV-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T QN QFS + + + L ++ +HL R+ LY + G+ ++ +
Sbjct: 61 TLQNMQFSKAKMDAIMPVYNSLFSTNNFHLFRAGLYARKAGLKSQGIGA----------- 109
Query: 216 LSANFYLTELALKEYIGILIAY 237
+A +Y+ ++E+I I + Y
Sbjct: 110 KTALYYMPNALIREFIAITVMY 131
>gi|115359113|ref|YP_776251.1| hypothetical protein Bamb_4365 [Burkholderia ambifaria AMMD]
gi|115284401|gb|ABI89917.1| protein of unknown function DUF218 [Burkholderia ambifaria AMMD]
Length = 210
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 34/219 (15%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R ++ F L+ ++ + + ++ V+ GN
Sbjct: 3 RIGRVLAAFACLWIVAAVVLVGAGMRMPSE--------------PADVAVIFGNALDD-- 46
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
R P +R+ +R Y+ + C + G GL E+ + L+
Sbjct: 47 -----RGAPKPVLAARLDVGVRCYREGQ-----CPAFLVSGAIDGPGLNEATAMRDYLVA 96
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV + I ++ Q +T AQ + + ++ + ++++S YHL R++L F+ GI
Sbjct: 97 RGVPAERIAVDDQGDNTLATAQHTRAYLQAHRLSRVLIISQYYHLARARLAFERVGIAGA 156
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ Y P + +E I R
Sbjct: 157 NISAAY--------PHHFQLRDIYSSWREVPAYAIYVLR 187
>gi|78061607|ref|YP_371515.1| hypothetical protein Bcep18194_B0757 [Burkholderia sp. 383]
gi|77969492|gb|ABB10871.1| protein of unknown function DUF218 [Burkholderia sp. 383]
Length = 207
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 74/215 (34%), Gaps = 34/215 (15%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ L+ ++ + + ++ V+ GN
Sbjct: 4 LLAVIACLWIAAAVALVAYGMRMPSE--------------PADVAVIFGNALDEA----- 44
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
P +R+ +R Y++ + C + G GL E+ + L+ GV
Sbjct: 45 --GAPKPVLAARLDVGVRCYRTGQ-----CPAFLVSGAIDGPGLNEATAMRDYLVARGVP 97
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
D I ++ Q +T AQ + + ++ + +++VS YHL R++L F+ GI +
Sbjct: 98 ADRITVDDQGDNTLATAQHTLAYLQAHRQSRVLIVSQYYHLARARLAFERVGIARADISA 157
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
Y P + +E + R
Sbjct: 158 AY--------PRRFQLRDVYSSWREVPAYAVYAVR 184
>gi|312866618|ref|ZP_07726833.1| putative membrane protein [Streptococcus parasanguinis F0405]
gi|311097917|gb|EFQ56146.1| putative membrane protein [Streptococcus parasanguinis F0405]
Length = 342
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/261 (18%), Positives = 104/261 (39%), Gaps = 44/261 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFM---------------------LLFSFIGWG 39
++ S IFL+ + ++ +++ + + +L +
Sbjct: 74 IIFSSIFLLFNGRQMMLFEGKRLANLLSLLYGLFIIGALALHFLPYFPGNDILIYLTDFA 133
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ L SY +K+ + I++LG+G P + R+ +
Sbjct: 134 LFYMTFLYLSYVSYGTFCNLFPVRKEPDAIIILGSGLIGDKVPPLL--------AQRLEK 185
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+Y+ ++ +I+SGG +AE+ L+E GV D I +E +S TF+
Sbjct: 186 GKAIYEQFERR---PKLIVSGGQGSDELIAEAEAMAGYLIEHGVPEDAILIENRSRTTFE 242
Query: 160 NAQFSSSMIKNMQGKNIIL-VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
N FS +++ +L V++++H R+ ++ + I SI +A
Sbjct: 243 NLTFSKRILEEEGLGKRVLVVTNSFHALRAGVFMRRLKI-----------PGRSIGSKTA 291
Query: 219 NFYLTELALKEYIGILIAYYR 239
+YL ++E +G++ Y++
Sbjct: 292 FYYLPSAWIRETVGLVSLYWK 312
>gi|311894949|dbj|BAJ27357.1| hypothetical protein KSE_15300 [Kitasatospora setae KM-6054]
Length = 240
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 18/172 (10%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
+ +L + + + + + V+ G G + EPS
Sbjct: 34 VLLCSVLGLAPNAWLYL--TQSAKVGTVASAPEAPVAVVFGAGL--------VDGEPSPY 83
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ + LY++ K I+ GD E+ L+ GV + +
Sbjct: 84 LAHRLDAALELYRAHK-----VRAILVTGDNGTVQYDETDAMRGYLIGRGVPAVRVVGDY 138
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DT+ + + + +LVS +H++R+ + GI+ A
Sbjct: 139 AGFDTWDSCTRAHRIFG---VDRAVLVSQTFHVRRALALCEAAGIDAYAVGV 187
>gi|300858936|ref|YP_003783919.1| hypothetical protein cpfrc_01519 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686390|gb|ADK29312.1| hypothetical protein cpfrc_01519 [Corynebacterium
pseudotuberculosis FRC41]
gi|302331185|gb|ADL21379.1| Hypothetical protein Cp1002_1509 [Corynebacterium
pseudotuberculosis 1002]
Length = 258
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 72/221 (32%), Gaps = 30/221 (13%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L + + +++ + +L + + IV+LG
Sbjct: 22 RLRFPGSRKDALYPVVVVLCLAALPSVAVVLRGRI--------RPKNKRGRFGSIVVLGT 73
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS Q +R+ + Q + +I GG E+ V
Sbjct: 74 A--------QYDGVPSRQFAARLRWAADQW----QTARVQKVITVGGKLPGDRFTEAQVG 121
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL++ V+ D + DT+ + ++ +++V+ H RS+L +
Sbjct: 122 REYLLKAHVDSDLVLEVPHGNDTWSSLNAVKEVVTE----PVLIVTDPNHALRSELIARL 177
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
GI AS + Y P A L E+ G+L+
Sbjct: 178 QGIKAVASSTPYSPTR---FPSKA---WWITFLHEHGGLLV 212
>gi|94984590|ref|YP_603954.1| hypothetical protein Dgeo_0483 [Deinococcus geothermalis DSM 11300]
gi|94554871|gb|ABF44785.1| protein of unknown function DUF218 [Deinococcus geothermalis DSM
11300]
Length = 259
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 56/184 (30%), Gaps = 14/184 (7%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG G S +R+ + L+++ T+
Sbjct: 78 QPPVRADAIIVLGGGVQCGAR------TLESSSLTRLLRGLELWRAGYAP--VLTVSEQS 129
Query: 121 GDPQKHGLAESIVYNNKLLESGVER--DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + + + ++ T A + + + ++L
Sbjct: 130 GLLGPPNCVKLSELERAQVRALYPTGGPEVLTLPNVTTTRDEAARVRDLARERGWRRVLL 189
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S H +R+ F G+N + + +++ + + L E +
Sbjct: 190 VTSPSHSRRAARLFAAQGVNVVSVPAPETRFDTALLLPADRLSALRVLLYEGLA----RV 245
Query: 239 RGNR 242
+ R
Sbjct: 246 KAGR 249
>gi|313674752|ref|YP_004052748.1| hypothetical protein Ftrac_0638 [Marivirga tractuosa DSM 4126]
gi|312941450|gb|ADR20640.1| protein of unknown function DUF218 [Marivirga tractuosa DSM 4126]
Length = 204
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/219 (13%), Positives = 76/219 (34%), Gaps = 31/219 (14%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++ IR F+ ++F+ I + + + + I ++LG
Sbjct: 1 MIKFFIRLGLFLLISAIVFAIFSNVFI-------ITKTSSYIYENINNIPEKEIALVLGT 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
++ E + +R+ L+ K + + GD + E
Sbjct: 54 SKRN------MKGEANSFFDNRMDAAAELFHKGKVKGLLLS-----GDNRTRYYNEPSDM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L++ GV + I ++T L T ++ + K+ +++ +H R+ Q+
Sbjct: 103 KKALMKKGVPENVISIDTAGLSTIESVYRCKEIFKHQDVA---IITQEFHAFRALYISQY 159
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ ++ A + + + T++ ++E+
Sbjct: 160 YEMDAIAFPAAEVPV----------YSSTKVTIREFFAR 188
>gi|296876546|ref|ZP_06900597.1| GdmH protein [Streptococcus parasanguinis ATCC 15912]
gi|296432539|gb|EFH18335.1| GdmH protein [Streptococcus parasanguinis ATCC 15912]
Length = 342
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 106/261 (40%), Gaps = 44/261 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFM---------------------LLFSFIGWG 39
++ S IFL+ + ++ +++ + + +L +
Sbjct: 74 IIFSSIFLLFNGRQMMLFEGKRLANLLSLLYGLFIIGALALHFLPYFPGNDILIYLTDFA 133
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ L SY K+ + I++LG+G P + R+ +
Sbjct: 134 LFYMTFLYLSYVSYGTFCNLFPVGKEPDAIIILGSGLIGDKVPPLL--------AQRLEK 185
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+Y+ ++ +I+SGG +AE+ L+E GV D I +E +S TF+
Sbjct: 186 GKAIYEQFERR---PKLIVSGGQGSDELIAEAEAMAGYLIEHGVPEDAILIENRSRTTFE 242
Query: 160 NAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
N FS +++ GK ++LV++++H R+ ++ + I SI +A
Sbjct: 243 NLTFSKRILEEEGLGKRVLLVTNSFHALRAGVFMRRLKI-----------PGRSIGSRTA 291
Query: 219 NFYLTELALKEYIGILIAYYR 239
+YL ++E +G++ Y++
Sbjct: 292 FYYLPSAWIRETVGLVSLYWK 312
>gi|300854922|ref|YP_003779906.1| hypothetical protein CLJU_c17410 [Clostridium ljungdahlii DSM
13528]
gi|300435037|gb|ADK14804.1| uncharacterized conserved membrane protein [Clostridium ljungdahlii
DSM 13528]
Length = 204
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 84/215 (39%), Gaps = 22/215 (10%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
++ I + +++ I + + + + + ++I++LG
Sbjct: 6 FIILLKYMAISVLFFIIIVLVVINLYPL----------LFYKSPETKLKRDRYDVIIILG 55
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+PS R+ + + L+ ++ II G + E+ +
Sbjct: 56 -------FPALQDGKPSPIMRERVIKAVELFNKGYANN-----IICSGGGVYNKYIEADI 103
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
N G+ + E +S +T+QN Q S ++++ + + ++V+S +HL+RS +
Sbjct: 104 MANFAESLGIPNSCLIREDKSRNTYQNIQNSIKIMEDKKWSSAMIVTSPWHLRRSNYFLS 163
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
F I + SDY + I ++ + + +K
Sbjct: 164 KFNITYQMEKSDYPREFSYIYIIAMYMWENYVMIK 198
>gi|295425794|ref|ZP_06818475.1| integral membrane protein [Lactobacillus amylolyticus DSM 11664]
gi|295064487|gb|EFG55414.1| integral membrane protein [Lactobacillus amylolyticus DSM 11664]
Length = 366
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 89/237 (37%), Gaps = 31/237 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ W+ ++ L + + + + + L+ + + +
Sbjct: 123 VVWVITLLGPAKYLPHWLNVLLTAAPTIAFYLVFLM---YNYLVNSILYQFVP------R 173
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK-QHSMHCTIIISGG 121
+ + + +++LG G + RI ++ + + II+SGG
Sbjct: 174 RYNQDYLIVLGAGLINGE-------RVTPLLAGRINRAIQFAQKQVDKGRKMPKIIMSGG 226
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---L 178
++E+ N + G++RDD+ LE +S +T+QN +S + G +
Sbjct: 227 RGGDEKISEAQAMMNYAISRGIKRDDLLLEDKSENTYQNMLYSKRVATKDFGSDKFKAKF 286
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ LY + G+ S + ++L ++E+ G+ +
Sbjct: 287 FSNNYHIFRAALYAKKVGLRANGVGSY-----------TRFYFLPNAIIREFAGVFV 332
>gi|210608912|ref|ZP_03288049.1| hypothetical protein CLONEX_00228 [Clostridium nexile DSM 1787]
gi|210152829|gb|EEA83835.1| hypothetical protein CLONEX_00228 [Clostridium nexile DSM 1787]
Length = 248
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 85/237 (35%), Gaps = 26/237 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+W + + ++ + + + +L + ++ L +
Sbjct: 30 FTWFWAVFGLANIGIGILTRGIPVWLEYILTGIFIVLWMIFFCVEVL----ILCAMISVA 85
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K+ I++LG A++ R+ +R + +I+SGG
Sbjct: 86 PKNMKYIIILGAQIRGKRVTEALK--------RRLDRGIRYLNENPETI----VIVSGGR 133
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ + E+ L G++ + I LE +S T++N + S + I + + I +V++
Sbjct: 134 GKGEDITEAEAMAEYLENCGIDANRICLEEKSTSTYENLKKSLAFIDDERRDKIGIVTNN 193
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+H+ R+ + G Y+I S ++E+ +L + R
Sbjct: 194 FHIYRAVKLAKSIGY----------RKVYAITASSNLAVFPNYMVREFFAVLALFLR 240
>gi|226365146|ref|YP_002782929.1| hypothetical protein ROP_57370 [Rhodococcus opacus B4]
gi|226243636|dbj|BAH53984.1| hypothetical protein [Rhodococcus opacus B4]
Length = 280
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 12/150 (8%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ P P + I++LG G + +R+ M
Sbjct: 104 FTPPNPLPAIQGPSTAIIVLGFGLLPD-------GTMRPELVNRLQAAMVQSWVSPMSP- 155
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II G ++G+ E+ L GV D I E ++ T NA S + +++
Sbjct: 156 ----IIVTGGNPQNGITEAAAMEGWLRSHGVPADRIHPEHRAGSTVGNALNSVPLARSLG 211
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
ILV+SA H++R+ + F G+ +
Sbjct: 212 AGGAILVTSANHIRRATVDFNVAGLPVVGA 241
>gi|121587797|ref|ZP_01677556.1| sanA protein [Vibrio cholerae 2740-80]
gi|153819088|ref|ZP_01971755.1| sanA protein [Vibrio cholerae NCTC 8457]
gi|121547961|gb|EAX58042.1| sanA protein [Vibrio cholerae 2740-80]
gi|126510371|gb|EAZ72965.1| sanA protein [Vibrio cholerae NCTC 8457]
Length = 221
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/214 (13%), Positives = 64/214 (29%), Gaps = 32/214 (14%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +++ ++ + + + Q + V+LG I T+
Sbjct: 1 MLWLTIGVVAGLLAIDRWVS-------WQTQNNIINDAQNTPPFQVAVVLGTSKYIGKTL 53
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + LY+ K + + GD E LL +G
Sbjct: 54 NEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHRSYNEPWTMKRDLLRAG 101
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ ++I L+ T + + + +++ +H +R+ ++ I
Sbjct: 102 IPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCERALFIARYQDIQASCL 158
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
P +N ++ L+E A
Sbjct: 159 AV----------PGPSNHSGFKVRLREVFARAYA 182
>gi|200389290|ref|ZP_03215902.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199606388|gb|EDZ04933.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 237
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 33 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 85 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 133
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 193
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 194 SSPTRSTRYKSWW-------AKTRFLLRETFYYSGYRL 224
>gi|325524364|gb|EGD02455.1| hypothetical protein B1M_21433 [Burkholderia sp. TJI49]
Length = 138
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+L F+++ +L + R++ ++ + LF + G + L+ + P+ P
Sbjct: 1 MILFDSFVLLFIGFMLFRKWRRLIALA-AVALFGLLATGWLAAPLIAWAEAG-VAPVARP 58
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+IV+ G GT T + P +RI +T LY++C+Q + CT+++SG
Sbjct: 59 DMHGQTTLIVI-GAGTRRTDTG----LRPPPDGDARIRKTAALYRACRQQAQRCTVVMSG 113
Query: 121 GDPQKHGLAESIVYNNKLLE 140
GDPQ HG E+ VY +L+
Sbjct: 114 GDPQHHGETEAAVYGRQLVA 133
>gi|161612436|ref|YP_001586401.1| hypothetical protein SPAB_00125 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194469326|ref|ZP_03075310.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197262481|ref|ZP_03162555.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198242615|ref|YP_002214051.1| hypothetical protein SeD_A0103 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205357053|ref|ZP_02344474.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205357529|ref|ZP_02571064.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205358348|ref|ZP_02655427.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|161361800|gb|ABX65568.1| hypothetical protein SPAB_00125 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194455690|gb|EDX44529.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197240736|gb|EDY23356.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197937131|gb|ACH74464.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205324427|gb|EDZ12266.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331506|gb|EDZ18270.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205335130|gb|EDZ21894.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|321222331|gb|EFX47403.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
Length = 237
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 33 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 85 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 133
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 193
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 194 SSPTRSTRYKSWW-------AQTRFLLRETFYYSGYRL 224
>gi|144900194|emb|CAM77058.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 167
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
PS R+ L S + ++ G H E++V + + +G++
Sbjct: 22 DGTPSPALARRVAHAATLVHSGRVAH-----LLMSGGAVNHPTPEALVMRDLAMAAGIDA 76
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
D I +E QS +T NA++ + +I ++LV+ ++HL R++L F G+ S +
Sbjct: 77 DRIVVEDQSRNTIGNARYCAPIIVAQGWTRLLLVTDSFHLPRARLIFARHGLKVALSGA- 135
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
P S N L+E ++ R
Sbjct: 136 --------RPESVNAEWVMAHLREIPAMMKTLVR 161
>gi|309379839|emb|CBX21615.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 218
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L F + + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAV----YRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q II +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIIFTGGRSKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ G+ +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGIPPRNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEIAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|223986622|ref|ZP_03636616.1| hypothetical protein HOLDEFILI_03938 [Holdemania filiformis DSM
12042]
gi|223961417|gb|EEF65935.1| hypothetical protein HOLDEFILI_03938 [Holdemania filiformis DSM
12042]
Length = 363
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 87/240 (36%), Gaps = 34/240 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL W + + H +L+ ++ + + ++ L +
Sbjct: 113 LLGWFVIPMGLSHSQSLPWILNLAFLAGAVLYLYLIFTFVCYLVSSWL-------FKLNR 165
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC--------KQHSMH 113
+ + + +++LG T P ++ R + Y+
Sbjct: 166 PRLNQDFLIILGCKVTEQGLTPLLKQ--------RCDRALAFYRRQEAKKTRFFPGRKKE 217
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQ 172
+I SGG AE+ V + LLE GV I++E QS++T++N FS ++ + +
Sbjct: 218 LILIPSGGQGPDEPRAEAEVMKDYLLEQGVPEVRIRVENQSVNTYENMVFSKKIMDSMKK 277
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ +S YH+ R+ L + GI I + ++ ++EY+
Sbjct: 278 NYKCLFCTSDYHVFRAGLLSRKAGI----------RRCSGIGSRTVAYFSYNAFIREYVA 327
>gi|190576261|ref|YP_001974106.1| hypothetical protein Smlt4469 [Stenotrophomonas maltophilia K279a]
gi|190014183|emb|CAQ47827.1| conserved hypothetical exported protein [Stenotrophomonas
maltophilia K279a]
Length = 210
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 65/213 (30%), Gaps = 28/213 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + ++F + LL + + I++LG
Sbjct: 12 LLGWLWRLFVLLVIWLLGVTAWIVWVGER----------------DQAAKADAIIVLGAA 55
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS RI + LY++ I G +ES V
Sbjct: 56 AYDAK--------PSPVFEERIRHGLDLYEARYAP---LLIFTGGYGGTGARFSESQVAR 104
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L+ GV D I +ET S +T QN + ++ +I+VS H+ R+ +
Sbjct: 105 RYALKHGVPDDAILIETASRNTVQNLVEAKRLMDQRGLHRVIVVSDPLHMARALRLSKAL 164
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
GI+ AS + + S
Sbjct: 165 GIDALASSTP-STRFRSFHTSWRFLVQEIYFFH 196
>gi|312135433|ref|YP_004002771.1| hypothetical protein Calow_1424 [Caldicellulosiruptor owensensis
OL]
gi|311775484|gb|ADQ04971.1| protein of unknown function DUF218 [Caldicellulosiruptor owensensis
OL]
Length = 210
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 63/176 (35%), Gaps = 16/176 (9%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K + I++LG PS R+ + LYK II+
Sbjct: 47 SAKPKKSDCIIVLGCAVYGN--------FPSPFFRERLNKAFELYKKGYARY----IIVC 94
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + E+ L+ GV + + E +S T++N + ++ K+ I+V
Sbjct: 95 GAKGPGENIFEAEAGKRYLIGKGVLPEFVLKEDKSFSTYENLLHAKRIMNEKGFKSAIIV 154
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA-LKEYIGIL 234
S+ +HL+R+ L + IN S + F +A E + L
Sbjct: 155 SNIFHLERACLIARKLKINASFSGVYVKQ---YLHEEYYGFVRESVAVWYEILKTL 207
>gi|325661886|ref|ZP_08150507.1| hypothetical protein HMPREF0490_01245 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471864|gb|EGC75081.1| hypothetical protein HMPREF0490_01245 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 241
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 87/233 (37%), Gaps = 35/233 (15%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
FL+ + H + ++ I F+ F F +I + L K
Sbjct: 42 FLLAAIVHFSPRWLQYILLTLNFIAYFVFFAVQVIICSAMLTL------------PPKKL 89
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG +++ R+ + K + +++SGG +
Sbjct: 90 DVIIVLGAQVRGKKITNSLK--------RRLDRGIEYLKENPET----RVVVSGGQGKGE 137
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E+ L+ G+ + I LE +S +T++N ++S +++ + I +VS+ +H+
Sbjct: 138 DVTEAFAMAQYLVSHGIAEEQISLEEKSRNTYENLKYS-ALLVDSMDDRIGIVSNNFHIY 196
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
RS L + G Y I ++E+ ++ Y
Sbjct: 197 RSLLLGRQIGY----------TRLYGIAAGCNPILFLNYMVREFFAVMRMYLT 239
>gi|262191641|ref|ZP_06049819.1| SanA protein [Vibrio cholerae CT 5369-93]
gi|262032483|gb|EEY51043.1| SanA protein [Vibrio cholerae CT 5369-93]
Length = 221
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/214 (12%), Positives = 64/214 (29%), Gaps = 32/214 (14%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +++ +L + + + Q + V+LG I T+
Sbjct: 1 MLWLTIGVLAGLLAIDRWVS-------WQTQNNIINDAQNTPPFQVAVVLGTSKYIGKTL 53
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + LY+ K + + GD E LL +G
Sbjct: 54 NEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHRSYNEPWTMKRDLLRAG 101
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ ++I L+ T + + + +++ +H +R+ ++ I
Sbjct: 102 IPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCERALFIARYQDIQASCL 158
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+++ ++ L+E A
Sbjct: 159 AVPGPSSHSGF----------KVRLREVFARAYA 182
>gi|213966760|ref|ZP_03394911.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|213928610|gb|EEB62154.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 166
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + ++LG+ T PS + +R+ + LY+ + + II
Sbjct: 5 SDNAQTSDAAIVLGSKVTPD-------GVPSARLQARLDRAVELYRQGRVRN-----IIV 52
Query: 120 GGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G G +E++ N L E + R+ I L+ Q T A+ S+ ++K K+ ++
Sbjct: 53 SGGTGVEGFSEAVGMANYLAERSGLPREAILLDEQGNTTKDTARNSAQIMKQRGFKSAVV 112
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+ +H+ RS+ G+ ++ + + L+ +E + ++
Sbjct: 113 VTQYFHITRSRYALYQAGVTQVSTAHARYFEWRDLYSLA----------REVAALPAYWW 162
>gi|325143566|gb|EGC65887.1| hypothetical protein NMBM01240013_2108 [Neisseria meningitidis
M01-240013]
gi|325205110|gb|ADZ00563.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
Length = 218
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCL----SVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|301383268|ref|ZP_07231686.1| hypothetical protein PsyrptM_11552 [Pseudomonas syringae pv. tomato
Max13]
gi|302062492|ref|ZP_07254033.1| hypothetical protein PsyrptK_21113 [Pseudomonas syringae pv. tomato
K40]
gi|302133475|ref|ZP_07259465.1| hypothetical protein PsyrptN_18884 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 189
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + ++LG+ T PS + +R+ + LY+ + + II
Sbjct: 28 SDNAQTSDAAIVLGSKVTPD-------GVPSARLQARLDRAVELYRQGRVRN-----IIV 75
Query: 120 GGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G G +E++ N L E + R+ I L+ Q T A+ S+ ++K K+ ++
Sbjct: 76 SGGTGVEGFSEAVGMANYLAERSGLPREAILLDEQGNTTKDTARNSAQIMKQRGFKSAVV 135
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+ +H+ RS+ G+ ++ + + L+ +E + ++
Sbjct: 136 VTQYFHITRSRYALYQAGVTQVSTAHARYFEWRDLYSLA----------REVAALPAYWW 185
>gi|228472898|ref|ZP_04057655.1| SanA protein [Capnocytophaga gingivalis ATCC 33624]
gi|228275480|gb|EEK14257.1| SanA protein [Capnocytophaga gingivalis ATCC 33624]
Length = 206
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 24/211 (11%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
F+L +G +I + + + + +LLG G +
Sbjct: 2 FFILFALLLGIVVIHNANSTIHKNAEGKLYTEVDSIPKNKVALLLGTGKYLKD------G 55
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+P+ R+ L+K+ K I+ GD + G E L+ G+
Sbjct: 56 QPNLYFRYRVEAAAALFKAQKVD-----FILISGDNSRQGYDEPTDMKEALVAMGIPEGK 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I L+ T + + + + +VS A+H +R+ + +GI C+ +
Sbjct: 111 IYLDYAGFRTLDSVVRAKEIFD---LTALTVVSQAFHDERAIYLAEKYGIKAIGFCARDV 167
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + + L+EY ++
Sbjct: 168 DK----------YSGMKTRLREYFARAKVFW 188
>gi|302671055|ref|YP_003831015.1| hypothetical protein bpr_I1696 [Butyrivibrio proteoclasticus B316]
gi|302395528|gb|ADL34433.1| hypothetical protein bpr_I1696 [Butyrivibrio proteoclasticus B316]
Length = 265
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 75/229 (32%), Gaps = 27/229 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
L + ++ Q + ++ +L+ + + +
Sbjct: 60 LFFGFLFVMDQKKLWSRVPKA---VRYAFRTVVVAGVLVFTICQVCILTAFFSKGAPGAD 116
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I++LG PS R+ + ++ ++++GG
Sbjct: 117 YIIVLGAQMRSSG--------PSIIYKYRLNSAIEYLRNNP----DTKVVVTGGQGSNEP 164
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++E L+E + D I +E+ SLDT +N + +I + I +V++ +HL R
Sbjct: 165 ISEGEGGKIYLMEKEISEDRIIVESTSLDTDENIVNAMKLINPDKDMTIGIVTNNFHLFR 224
Query: 188 SQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + + Y +P ++E GIL
Sbjct: 225 GMMLARRHTDAEITGIAAF---TEYQFLP--------NNMVRETFGILK 262
>gi|59802238|ref|YP_208950.1| hypothetical protein NGO1925 [Neisseria gonorrhoeae FA 1090]
gi|161869022|ref|YP_001598188.1| periplasmic protein [Neisseria meningitidis 053442]
gi|194099817|ref|YP_002002952.1| Periplasmic protein [Neisseria gonorrhoeae NCCP11945]
gi|239999990|ref|ZP_04719914.1| Periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|240013062|ref|ZP_04719975.1| Periplasmic protein [Neisseria gonorrhoeae DGI18]
gi|240017631|ref|ZP_04724171.1| Periplasmic protein [Neisseria gonorrhoeae FA6140]
gi|240081888|ref|ZP_04726431.1| Periplasmic protein [Neisseria gonorrhoeae FA19]
gi|240114167|ref|ZP_04728657.1| Periplasmic protein [Neisseria gonorrhoeae MS11]
gi|240116805|ref|ZP_04730867.1| Periplasmic protein [Neisseria gonorrhoeae PID18]
gi|240119033|ref|ZP_04733095.1| Periplasmic protein [Neisseria gonorrhoeae PID1]
gi|240122252|ref|ZP_04735214.1| Periplasmic protein [Neisseria gonorrhoeae PID24-1]
gi|240122429|ref|ZP_04735385.1| Periplasmic protein [Neisseria gonorrhoeae PID332]
gi|240126722|ref|ZP_04739608.1| Periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|240127142|ref|ZP_04739803.1| Periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|254493442|ref|ZP_05106613.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|260441598|ref|ZP_05795414.1| Periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|268595796|ref|ZP_06129963.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268597985|ref|ZP_06132152.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268600240|ref|ZP_06134407.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|268602480|ref|ZP_06136647.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268604748|ref|ZP_06138915.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268681017|ref|ZP_06147879.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268685301|ref|ZP_06152163.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|268685499|ref|ZP_06152361.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044968|ref|ZP_06570677.1| periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|293398039|ref|ZP_06642245.1| periplasmic protein [Neisseria gonorrhoeae F62]
gi|296313265|ref|ZP_06863206.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|59719133|gb|AAW90538.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|161594575|gb|ABX72235.1| periplasmic protein [Neisseria meningitidis 053442]
gi|193935107|gb|ACF30931.1| Periplasmic protein [Neisseria gonorrhoeae NCCP11945]
gi|226512482|gb|EEH61827.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|268549185|gb|EEZ44603.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268551773|gb|EEZ46792.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268584371|gb|EEZ49047.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|268586611|gb|EEZ51287.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268588879|gb|EEZ53555.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268621301|gb|EEZ53701.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268625585|gb|EEZ57985.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|268625783|gb|EEZ58183.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011862|gb|EFE03858.1| periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|291611985|gb|EFF41054.1| periplasmic protein [Neisseria gonorrhoeae F62]
gi|296840237|gb|EFH24175.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|317165286|gb|ADV08827.1| hypothetical protein NGTW08_1872 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 218
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L F + + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAV----YRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|218767273|ref|YP_002341785.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|121051281|emb|CAM07557.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|319409538|emb|CBY89825.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
WUE 2594]
Length = 218
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCL----SVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 60 AAAWDK--------HPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|260548892|ref|ZP_05823114.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260408060|gb|EEX01531.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 261
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 79/245 (32%), Gaps = 30/245 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL-- 58
++ + + L + + FF + GW L+ L + +
Sbjct: 36 IVPLILGAFFCLYALFYYHLERFFFYHYRLHSVWRFGWLCFWIWLI-GLGYFFSFIKENK 94
Query: 59 -SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
S Q I++LG+G PS R+ + S Q +I
Sbjct: 95 NSSQNLPAVKAIIVLGSGVENG--------RPSAILAKRLDTAAPVALSQPQ----AKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---G 173
++GG E++V + L + + ++ + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKEPEALVMSRYLEQHFHIAKERMILEDKSTSTELNLKNSKPLLEQAHISID 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ I +V+S +H R+ + G S L+EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTHI-YTVAAETPLVSRY---------NAWLREYFAY 252
Query: 234 LIAYY 238
+
Sbjct: 253 ASGWI 257
>gi|195873701|ref|ZP_02698260.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195632873|gb|EDX51327.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 237
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 33 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 85 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 133
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 193
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 194 SSPTRATRYKSWW-------AQTRFLLRETFYYSGYRL 224
>gi|165975902|ref|YP_001651495.1| SanA protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|303252686|ref|ZP_07338849.1| SanA protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|165876003|gb|ABY69051.1| SanA protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|302648654|gb|EFL78847.1| SanA protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
Length = 229
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 77/225 (34%), Gaps = 31/225 (13%)
Query: 15 LLCQSIRKIFFMSC---FMLLFSFIGWGIIPTILLKHLQFSYQR--PLLSPQWKKDGNII 69
L S+ K C ++ F+ + + I ++ + Y + +
Sbjct: 10 LPKTSLWKRCLSICPRIALVSFAIVLFLSIAIFIIDYATGIYVKDNIYTDIEKLPKHRNA 69
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG P + + R+ ++L K ++ GD +
Sbjct: 70 VVLGTSKFYAKGTPNLYYKY------RLEAAVQLINKGKAKK-----LLVSGDNKTPYYN 118
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V N L G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 119 EPKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERAL 175
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ IN + Y + + L+E++ +
Sbjct: 176 FIAKYHNINAVCFAAKYPEGHIKVR------------LREFLARI 208
>gi|296119849|ref|ZP_06838403.1| putative secreted protein [Corynebacterium ammoniagenes DSM 20306]
gi|295967003|gb|EFG80274.1| putative secreted protein [Corynebacterium ammoniagenes DSM 20306]
Length = 204
Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 16/173 (9%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG PS +R+ ET L + K + G +
Sbjct: 4 AIVVLGA--------SQYDGRPSRVLTARLNET--LATAKKHPGADIHFVTLGANMPGDR 53
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V LL+ GVE + + DT + + + + + +++ H R
Sbjct: 54 FTEAGVARTYLLDRGVESHQVHAVPEGNDTQGSLEAAIKTHQELVDAPSTIITDPLHTLR 113
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+L + G + + + YS L E G++I +G
Sbjct: 114 VKLIARQLGWKAQVKGA--RDCPYSFPQR----EWWGGMLHEAGGLVIVVLQG 160
>gi|241896247|ref|ZP_04783543.1| integral membrane protein [Weissella paramesenteroides ATCC 33313]
gi|241870488|gb|EER74239.1| integral membrane protein [Weissella paramesenteroides ATCC 33313]
Length = 359
Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 31/210 (14%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+L F I + +L L + K + + I++LG G
Sbjct: 149 VILYLVFWFLAFITSFILTRL----------YRPKYNQDYIIVLGAGLLNGKD------- 191
Query: 89 PSFQSYSRIFETMRLYKSC-KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
S SRI + ++ + +I SGG L E + + G +
Sbjct: 192 VSPLLASRIQIALDFANKQFEKTGYYPWLIFSGGQGGDEKLPEGVAMAEYAKQHGAQSSH 251
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ +E QS T++N FS +++ N + +S YH R+ Y + G+ +
Sbjct: 252 VLIEDQSKTTYENMLFSKKILQARDLNLANGLFATSDYHTFRAAGYARLVGLQIDGLGA- 310
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ F++ ++EYI +L
Sbjct: 311 ----------KTSRFFIPNAFIREYIALLA 330
>gi|77745325|gb|ABB02563.1| unknown [Lactobacillus reuteri]
Length = 271
Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 94/236 (39%), Gaps = 25/236 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + ++ W + ++ + S L + + + L + +
Sbjct: 43 VLMLLNLIVVWPIFAFLLKNLPIQSVSWLSSLVVATIDVLSTFNLILFCVFSCCTRLRKC 102
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++LG P + +R+ + + +C + II SGG
Sbjct: 103 PATVQGFLVLGAAVKHGQVPPVL--------ATRLDKAI----NCWKTHQSAKIIGSGGI 150
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
QK +E+ V L+ G+ I E + L+T+QN F+S +IK + +++V+S
Sbjct: 151 VQKAKESEAEVMAGYLIAHGIPARKIIRENKGLNTWQNLAFASQLIKPQ--ETVVVVTSD 208
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H+ R++ Y + G+N S + PL+ +++Y+GI+ ++
Sbjct: 209 FHVLRARAYARKMGLNWSFISSK---TPWRYCPLT--------FIRDYLGIIRDHW 253
>gi|261379601|ref|ZP_05984174.1| putative periplasmic protein [Neisseria subflava NJ9703]
gi|284798080|gb|EFC53427.1| putative periplasmic protein [Neisseria subflava NJ9703]
Length = 218
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 12/164 (7%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ ++ I L Y+ + + V+LG PS
Sbjct: 19 LALSVLLVCGIFLSGTWQIYRTGSHTLPKDAHADAAVVLGAAAWDK--------RPSPVF 70
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
RI + LY+S + II +GG P+K + E+ V L+ G+ +I E
Sbjct: 71 RERINHAITLYQSHRVG----KIIFTGGTPKKGFMTEAEVGRRYALKQGIPAHNILFENT 126
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
S +T++N + ++ +II+VS YHL R++ G+
Sbjct: 127 SRNTYENLRNIVPIMHANGVGSIIVVSDPYHLARAEEMAADLGL 170
>gi|13473042|ref|NP_104609.1| hypothetical protein mlr3524 [Mesorhizobium loti MAFF303099]
gi|14023790|dbj|BAB50395.1| mlr3524 [Mesorhizobium loti MAFF303099]
Length = 241
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 74/231 (32%), Gaps = 40/231 (17%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
L ++R + + G+G + L +P + + I++L
Sbjct: 28 ISRLKTALRISALSLLILAVLFAGGFGWFANKVAH---------LTTPANPEKADAIIVL 78
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G SR+ M L S K + + + + L +
Sbjct: 79 TGG------------------QSRLDAAMDLLASGKGERLLISGVHPSA--SRRQLQAAT 118
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L V+ D +LDT NA+ S+ +++ +ILV++ YH+ RS L
Sbjct: 119 GGDKNLFSCCVDIDR-----AALDTIGNAEESAKWVESHAYGTVILVTNNYHMPRSLLEM 173
Query: 193 QH--FGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G + + + + EY L+A RG
Sbjct: 174 GRLLHGAKLEPYPVVNSNLDNGGWLTKPRAL---RVLFTEYTKYLLALARG 221
>gi|325197310|gb|ADY92766.1| conserved hypothetical protein [Neisseria meningitidis G2136]
Length = 218
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L + + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCL----SVFPLLLVFTSSVWAVYRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|224581941|ref|YP_002635739.1| secreted protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224466468|gb|ACN44298.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 237
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 33 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRIADCAIVAGAGVSGK- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 85 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 133
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 193
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 194 SSPTRSTRYKSWW-------AQTRFLLRETFYYSGYRL 224
>gi|254453829|ref|ZP_05067266.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198268235|gb|EDY92505.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 158
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 23/172 (13%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG P +R R LY+S H T ++ G +H +
Sbjct: 5 IILGAAVWREGPSPTLR--------RRTLHAAALYQSG-----HITSLVLCGGVGQHPPS 51
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV--SSAYHLKR 187
E+ V + LL +GV D + LE S T +N +F+ +I I +V + YH R
Sbjct: 52 EAAVMQDILLGAGVPMDAMVLEDHSTTTGENIRFARDLIHETDVAIIEVVIITDWYHAPR 111
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++L + G++ +S A + T+ AL+E + R
Sbjct: 112 AKLIARRAGLHATSSSPSLRGAKFWP--------QTKSALREIPAYIAYAIR 155
>gi|2194196|gb|AAB61133.1| GdmH [Staphylococcus gallinarum]
gi|86371663|gb|ABC94900.1| GdmH [Staphylococcus gallinarum]
Length = 330
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/233 (20%), Positives = 90/233 (38%), Gaps = 31/233 (13%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFM--SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
WI + + +S+ F+ + L + I +L +
Sbjct: 103 WIIVTSPVAFFINKSLASYIFVVYIFIVSLLIYFLSLFISCFILSLFYSR-------RKV 155
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I++LG+G P ++ SRI + S K ++SGG
Sbjct: 156 NNNIRYILVLGSGLIEDKVPPLLQ--------SRIDIGKNFFDSKKDA--DIKFLLSGGQ 205
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ++E+ N L+ GV + I E +S T++N QFS +IK NI++ S+
Sbjct: 206 GKDERISEAQAMKNYLISQGVNENKIICENKSQSTYENLQFSKKLIKKN--TNILICSNN 263
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+H+ R+ + +YS+ + N++ T ++E I IL
Sbjct: 264 FHILRAVFIAKKLKYQH----------FYSLGSKTKNYFFTNAFIRELIAILK 306
>gi|16763488|ref|NP_459103.1| secreted protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|205351438|ref|YP_002225239.1| secreted protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207855611|ref|YP_002242262.1| hypothetical protein SEN0100 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|16418596|gb|AAL19062.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205271219|emb|CAR36007.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206707414|emb|CAR31687.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261245331|emb|CBG23119.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|301156727|emb|CBW16201.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911068|dbj|BAJ35042.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|323128416|gb|ADX15846.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326621795|gb|EGE28140.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326626461|gb|EGE32804.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987050|gb|AEF06033.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 206
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 2 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 54 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 162
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 163 SSPTRSTRYKSWW-------AQTRFLLRETFYYSGYRL 193
>gi|257067909|ref|YP_003154164.1| hypothetical protein Bfae_07170 [Brachybacterium faecium DSM 4810]
gi|256558727|gb|ACU84574.1| uncharacterized conserved protein [Brachybacterium faecium DSM
4810]
Length = 338
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 82/257 (31%), Gaps = 45/257 (17%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-------------- 52
FLI + ++ + R + + + + + I+ L + L +
Sbjct: 75 FLIANGLTMVRKEGRSLGNLLSGIAGLALLAAPIVSLALARTLTPAGLGIGALLALIALH 134
Query: 53 ----------YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
P + I++ G+G +R R
Sbjct: 135 VGIAFLVFLCASVPYQLFPKQLSTTGIIVHGSGLIRGQVTKLLRGRLDRAVAER------ 188
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNA 161
+ + + ++ SGG + +E L E G+ + I ET S T +N
Sbjct: 189 --ERLLRLGIDPLLVPSGGRGEDEPRSEGSAMAEYLQEEAGIPAERIHAETASRTTEENL 246
Query: 162 QFSSSMIKNMQGKNIILV-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
S ++ +V +S YH R+ L + G + +A +A +
Sbjct: 247 TLSHRILDEAGHHGPYVVSTSRYHAFRAALLARGLGYDDEAIG-----------GPTAFY 295
Query: 221 YLTELALKEYIGILIAY 237
Y+ L+E+I ++
Sbjct: 296 YVPSATLREFIAVMSYR 312
>gi|229827667|ref|ZP_04453736.1| hypothetical protein GCWU000182_03056 [Abiotrophia defectiva ATCC
49176]
gi|229788127|gb|EEP24241.1| hypothetical protein GCWU000182_03056 [Abiotrophia defectiva ATCC
49176]
Length = 319
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 34/242 (14%)
Query: 2 LLSWIFLIVSYWH------LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
+L F I+ + + + F++ I LL L +++
Sbjct: 78 ILIIAFYIMIFVRAYGTDNYIFYQNPWLNIFFIFVIYSYIIFGFAFAGFLLYSLLYNFIP 137
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
K+ + I++ G G + RI + + +K K + +
Sbjct: 138 K------GKNYDFIIIHGAGLLNGE-------RVTPLLKRRIDKAVEAFK--KSRNSNIK 182
Query: 116 IIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM-QG 173
+I SGG ++E+ N L+E V + + +E QS T+QN FS + +++ +
Sbjct: 183 LIASGGQGADEKISEARAIFNYLMEETDVPGEAVLMEDQSKTTYQNLLFSKKLGESLVEN 242
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ V++ YH+ R+ Y + GI +A++YL ++EY+ +
Sbjct: 243 PRFLFVTNDYHVFRTSTYAKKIGIRGDGLGC-----------STASYYLPSAFIREYVAL 291
Query: 234 LI 235
+
Sbjct: 292 CV 293
>gi|267991770|gb|ACY86655.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
Length = 250
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 46 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 97
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 98 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 146
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 147 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 206
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 207 SSPTRSTRYKSWW-------AQTRFLLRETFYYSGYRL 237
>gi|225076794|ref|ZP_03719993.1| hypothetical protein NEIFLAOT_01845 [Neisseria flavescens
NRL30031/H210]
gi|224951892|gb|EEG33101.1| hypothetical protein NEIFLAOT_01845 [Neisseria flavescens
NRL30031/H210]
Length = 218
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 12/164 (7%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ ++ I L Y+ L + + V+LG PS
Sbjct: 19 LALSVLLVCGIFLTGTWQIYRTGLQTLPKDAHADAAVVLGAAAWDK--------RPSPVF 70
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
RI + LY+S + II +GG P+K + E+ V L+ G+ +I E
Sbjct: 71 RERINHAITLYQSHRVG----KIIFTGGTPKKGFMTEAEVGRRYALKQGIPAHNILFENT 126
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
S +T++N ++ +II+VS YHL R++ G+
Sbjct: 127 SRNTYENMLNIVPIMHANGVGSIIVVSDPYHLARAEEMAADLGL 170
>gi|42527834|ref|NP_972932.1| sanA protein, putative [Treponema denticola ATCC 35405]
gi|41818662|gb|AAS12851.1| sanA protein, putative [Treponema denticola ATCC 35405]
Length = 226
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 20/189 (10%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I+KI F+ IG I +L Y +P + V++
Sbjct: 1 MKSKPIKKIALCIIFLFALILIGIVSINIYMLS-----YSKPYIYKNISALPEKYVVIVP 55
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + S RI + K+ K ++ GD + G E
Sbjct: 56 GAKV------YKNTVSHVVRDRIEAAVNCLKNKKAER-----VLISGDHGRKGYDEVNRM 104
Query: 135 NNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + G + + I ++ T++ + + ++ ++V+ A+H R+ +
Sbjct: 105 RIFMQDVYGTDENLIFMDHAGFSTYETMYRAREIF---CIEDAVVVTQAFHTARAVYIGR 161
Query: 194 HFGINTKAS 202
G++ A
Sbjct: 162 KLGLDVIAY 170
>gi|171317689|ref|ZP_02906873.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
gi|171097164|gb|EDT42015.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
Length = 219
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 78/224 (34%), Gaps = 28/224 (12%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ Q ++ +L +F I+ ++L + ++ V+ GN
Sbjct: 1 MKQRFKRGSVARIGRVLAAFACLWIVAAVVLVGAGMRMPS--------EPADVAVIFGNA 52
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P +R+ +R Y+ + C + G GL E+
Sbjct: 53 LDDH-------GAPKPVLAARLDVGVRCYRDGQ-----CPAFLVSGAIDGPGLNEATAMR 100
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ L+ GV I ++ Q +T AQ + + ++ + ++++S YHL R++L F+
Sbjct: 101 DYLVAHGVPAGRIAVDDQGDNTLATAQHARAYLQAHRMSRVLIISQYYHLARARLAFERV 160
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
GI + P + + +E I R
Sbjct: 161 GIA--------RANISAAYPHHFQWRDIYSSWREVPAYAIYVLR 196
>gi|238911156|ref|ZP_04654993.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 206
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 2 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 54 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 162
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 163 SSPTRSTCYKSWW-------AKTRFLLRETFYYSGYRL 193
>gi|258455282|ref|ZP_05703242.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|257862493|gb|EEV85261.1| conserved hypothetical protein [Staphylococcus aureus A5937]
Length = 322
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 24/187 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + K+ +II++LG G P + +R+ + +Y+
Sbjct: 134 WTVSYRHRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS--- 182
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II+SGG ++E + L+ GV++ DI +E+ S++T+ N +S +I N+
Sbjct: 183 ATKIIVSGGQGPDEPISEVLAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLY 242
Query: 173 GKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ + +V +S +H+ R+ Q G++ S Y+ + + +K+Y
Sbjct: 243 HEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDY 291
Query: 231 IGILIAY 237
+G++ Y
Sbjct: 292 LGVMYQY 298
>gi|205360555|ref|ZP_02684196.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205348825|gb|EDZ35456.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 237
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 33 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 85 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 133
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILREQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 193
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 194 SSPTRSTRYKSWW-------AQTRFLLRETFYYSGYRL 224
>gi|62178663|ref|YP_215080.1| hypothetical protein SC0093 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126296|gb|AAX63999.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322713116|gb|EFZ04687.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 206
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 2 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRIADCAIVAGAGVSGK- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 54 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 162
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 163 SSPTRSTRYKSWW-------AQTRFLLRETFYYSGYRL 193
>gi|268590269|ref|ZP_06124490.1| protein SanA [Providencia rettgeri DSM 1131]
gi|291314553|gb|EFE55006.1| protein SanA [Providencia rettgeri DSM 1131]
Length = 234
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 64/215 (29%), Gaps = 22/215 (10%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++FF + +F ++ + + + ++ ++LG
Sbjct: 2 RKRLFFGLIILAGIAFTTIMLLDRWIS---WDTAPYIYEDVEKLPARDVGMVLGTSKYYA 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + RI Y S K + + GD H E I L+
Sbjct: 59 SGVNNLYYTY------RIKGAAEAYHSGKVKYLLLS-----GDNGAHNYNEPINMRKDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV I L+ T + + + +++ +H +R+ +H GI+
Sbjct: 108 KEGVPASKIVLDFAGFRTLDSVVRTKKVFDTDNFT---IITQRFHCERAVFIAKHKGIDA 164
Query: 200 KASCSD-----YLNAYYSIIPLSANFYLTELALKE 229
+ Y + + +E
Sbjct: 165 QCLAVPTPSGMYRVRVREVFARLGALADLYILKRE 199
>gi|254671270|emb|CBA08572.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 218
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 12/190 (6%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + + ++L + + + + Y+ + ++LG
Sbjct: 1 MKKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA 60
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS RI + LY Q II +GG +K + E+ V
Sbjct: 61 AAWDK--------RPSPVFRERINHAIALY----QSRRVGKIIFTGGRSKKGYMTEAEVG 108
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 109 RRYALKQGIPPRNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAED 168
Query: 195 FGINTKASCS 204
G+ S +
Sbjct: 169 LGVRVYMSAT 178
>gi|154500224|ref|ZP_02038262.1| hypothetical protein BACCAP_03888 [Bacteroides capillosus ATCC
29799]
gi|150270956|gb|EDM98230.1| hypothetical protein BACCAP_03888 [Bacteroides capillosus ATCC
29799]
Length = 230
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 85/225 (37%), Gaps = 33/225 (14%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + + + ++ I + I+ I+ + +++LG
Sbjct: 13 KKLHPVLRVIVGLIGLGLICFAILAAIVYAG---------ERTSMQGTPKAMIILGCKVE 63
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS R+ + +I+SGG ++E+ +
Sbjct: 64 KSG--------PSQLLRDRLDTALDYLN---GLDSPIPVIVSGGQGLDEPVSEAASMADY 112
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----IILVSSAYHLKRSQLYFQ 193
L+E+G D I LE S +T +N +S ++++++ I++VS+ +HL R+++ +
Sbjct: 113 LIEAGYSDDYIYLEDNSHNTAENLGYSVALLESLSLDPAEDEILIVSNGFHLTRARMLAE 172
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
FG L A S +P + +E + ++ ++
Sbjct: 173 RFGYGH----VSTLAAPSSHLPS-----RISMFFREPLALVKSFL 208
>gi|319638788|ref|ZP_07993547.1| periplasmic protein [Neisseria mucosa C102]
gi|317400029|gb|EFV80691.1| periplasmic protein [Neisseria mucosa C102]
Length = 218
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ ++ I L Y+ L + + V+LG PS
Sbjct: 19 LALSVLLVCGIFLSGTWQIYRTGLQTLPKDVHADAAVVLGAAAWDK--------RPSPVF 70
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
RI + LY+S + II +GG P+K + E+ V L+ G+ +I E
Sbjct: 71 RERINHAITLYQSHRVG----KIIFTGGTPKKGFMTEAEVGRRYALKQGIPAHNILFENT 126
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
S +T++N + ++ +II+VS YHL R++ G+
Sbjct: 127 SRNTYENLRNIVPIMHANGVGSIIVVSDPYHLARAEEMAADLGL 170
>gi|54025784|ref|YP_120026.1| hypothetical protein nfa38140 [Nocardia farcinica IFM 10152]
gi|54017292|dbj|BAD58662.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 218
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G + R+ + + II++GG+
Sbjct: 76 RGPDTAIVVLGYGLLPD-------GAMRPELVERLRAG----YAQALLAPASPIIVTGGN 124
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++G E+ + L+ G+ + + ++ T +NA++++ ++ + ++ ++V+S
Sbjct: 125 -PRNGTTEAAAMADWLVARGIPPARVHRDDRATTTRENAEYAARILAALGARDAVVVTSG 183
Query: 183 YHLKRSQLYFQHFGINTKAS 202
H+ R+ F+ GI A+
Sbjct: 184 DHVPRAVALFRAAGIEVAAA 203
>gi|302522754|ref|ZP_07275096.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302431649|gb|EFL03465.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 327
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 82/222 (36%), Gaps = 24/222 (10%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + +G + +L Y + ++ + +V+LG G
Sbjct: 110 ARTLLVLAGTITAIAGYFGFLFACMLA-----YAFLYGHVRVRRRTDYVVVLGAGLLGGE 164
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
S +R+ + ++ + +++SGG L E+ + E
Sbjct: 165 -------RVSPLLAARLDRALSAHRKLTKRGREPLLLLSGGKGGDEALPEAEAMARYVRE 217
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G + E S T +N + S +++ K G ++V+S YH+ R+ + + G+
Sbjct: 218 KGFPERLLVREEHSATTGENLRNSHALMAKARPGYRCVVVTSNYHVFRTAVTARRVGVRG 277
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ +A ++ ++E++ +L+ Y R N
Sbjct: 278 HVVGA-----------PTAPYFWPSATIREFVALLVDYRRTN 308
>gi|108763026|ref|YP_634765.1| hypothetical protein MXAN_6648 [Myxococcus xanthus DK 1622]
gi|108466906|gb|ABF92091.1| hypothetical protein MXAN_6648 [Myxococcus xanthus DK 1622]
Length = 292
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 75/216 (34%), Gaps = 30/216 (13%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ ++ + +L G + + + +++V+LG
Sbjct: 91 RLFRLLMVGAGVLTCGVFGLAWVVDRFGQR------------EQAAPADVLVVLGA---- 134
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS +R + LY ++ G + +E+
Sbjct: 135 ---RVLPGGVPSGALRARTEHAVALYHRG-----VAPRLVFSGGVGVNPPSEARAMLALA 186
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
GV + LE S T NA+ ++ +++ + + +++VS YHL R++ YF+ +G
Sbjct: 187 TRMGVPAEACVLEEGSHSTDDNARLTAEVLRGLGARRVVVVSDPYHLLRARNYFRLYGWE 246
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
S + + Y T ++E + +L
Sbjct: 247 VATSPA---LETERNLDTFDRIYWT---VREAVALL 276
>gi|325143399|gb|EGC65728.1| hypothetical protein NMB9615945_0016 [Neisseria meningitidis
961-5945]
Length = 218
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L F + + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAV----YRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q II +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIIFTGGRSKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ G+ +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGIPPRNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|304388801|ref|ZP_07370857.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|304337253|gb|EFM03431.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
Length = 218
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCL----SVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|298370445|ref|ZP_06981761.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281905|gb|EFI23394.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 199
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 21/176 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RKI ++ +++ + +G + ++ R + + V+LG
Sbjct: 2 LRKILWIGTGLVILWLLLFGWV-------WGNNFYRSRQPVESIAPADTAVILGISVHD- 53
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ SR+ + L+K+ K +I G G +
Sbjct: 54 ------EGRQNPCLISRVEAGVELWKAGKVKK-----LIMSGGMNHDGYVGAQSMMQTAE 102
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ G+ R+ I+LE S T QN +++ MI+ K++++VSSAYH+ R++
Sbjct: 103 KMGIPREVIELEDHSETTHQNILYTAPMIEQ--DKSVVIVSSAYHIPRARWIAGKL 156
>gi|237809576|ref|YP_002894016.1| hypothetical protein Tola_2837 [Tolumonas auensis DSM 9187]
gi|237501837|gb|ACQ94430.1| protein of unknown function DUF218 [Tolumonas auensis DSM 9187]
Length = 227
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 70/228 (30%), Gaps = 27/228 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
I + +R+I + L + + ++ H + Y + +
Sbjct: 5 FIQFVTTIFTPRLRRIIRRTVITLSVTLFLLLWLANQVISH-ERQYTYDNV--EKVPYNK 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG + I + +RI T L+ S K II GD
Sbjct: 62 VAVVLGT------SKYLISGGLNQYFQNRIDATADLWFSGKISQ-----IIVSGDNAHMS 110
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E +LL+ G+ I + T + + + +VS + +R
Sbjct: 111 YNEPREMRRELLKRGIPARAIYSDYAGFRTLDSILRAHGVFGQ---TRFTVVSQRFQNER 167
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +H ++ + ++AY + +E L
Sbjct: 168 AIYLARHHKLDVIGFNARDVDAYTGFKTRT----------REIFARLW 205
>gi|333023541|ref|ZP_08451605.1| hypothetical protein STTU_1045 [Streptomyces sp. Tu6071]
gi|332743393|gb|EGJ73834.1| hypothetical protein STTU_1045 [Streptomyces sp. Tu6071]
Length = 334
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 82/222 (36%), Gaps = 24/222 (10%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + +G + +L Y + ++ + +V+LG G
Sbjct: 117 ARTLLVLAGTITAIAGYFGFLFACMLA-----YAFLYGHVRVRRRTDYVVVLGAGLLGGE 171
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
S +R+ + ++ + +++SGG L E+ + E
Sbjct: 172 -------RVSPLLAARLDRGLSAHRKLTKRGREPLLLLSGGKGGDEALPEAEAMARYVRE 224
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G + E S T +N + S +++ K G ++V+S YH+ R+ + + G+
Sbjct: 225 KGFPERLLVREEHSATTGENLRNSHALMAKARPGYRCVVVTSNYHVFRTAVTARRVGVRG 284
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ +A ++ ++E++ +L+ Y R N
Sbjct: 285 HVVGA-----------PTAPYFWPSATIREFVALLVDYRRTN 315
>gi|117618289|ref|YP_855049.1| sanA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559696|gb|ABK36644.1| sanA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 341
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 18/160 (11%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ + I P+ RI LY + K I+ GD E
Sbjct: 65 ALVLGTSKYLIGGSPNHYFKYRIKAAAELYNNGKVDY-----ILVSGDNATVQYNEPRQM 119
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+++G+ + I + T + + + + +VS A+H +R+ +H
Sbjct: 120 RRALIQAGIPANAIYSDYAGFRTLDSIVRAKEVFGQ---AHFTVVSQAFHNERAIFIARH 176
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
FGI + + P + T ++E L
Sbjct: 177 FGIEAVGFNA--------VDPSAYQGIKTR--VREVFARL 206
>gi|302206636|gb|ADL10978.1| Putative secreted protein [Corynebacterium pseudotuberculosis C231]
Length = 258
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 72/221 (32%), Gaps = 30/221 (13%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L + + +++ + +L + + IV+LG
Sbjct: 22 RLRFPGSRKDALYPVVVVLCLAALPSVAVVLRGRI--------RPKNKRGRFGSIVVLG- 72
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS Q +R+ + Q + +I GG E+ V
Sbjct: 73 -------TAQYDGVPSRQFAARLRWAADQW----QTARVQKVITVGGKLPGDRFTEAQVG 121
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL++ V+ D + DT+ + ++ +++V+ H RS+L +
Sbjct: 122 REYLLKAHVDSDLVLEVPHGNDTWSSLNAVKEVVT----GPVLIVTDPNHALRSELIARL 177
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
GI AS + Y P A L E+ G+L+
Sbjct: 178 QGIKAVASSTPYSPTR---FPSKA---WWITFLHEHGGLLV 212
>gi|147673100|ref|YP_001216757.1| sanA protein [Vibrio cholerae O395]
gi|146314983|gb|ABQ19522.1| sanA protein [Vibrio cholerae O395]
Length = 221
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/214 (12%), Positives = 64/214 (29%), Gaps = 32/214 (14%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +++ ++ + + + Q + V+LG I T+
Sbjct: 1 MLWLTIGVVAGLLAIDRWVS-------WQTQNNIINDAQNTPPFQVAVVLGTSKYIGKTL 53
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + LY+ K + + GD E LL +G
Sbjct: 54 NEYYTN-------RIDAAIALYQQGKVRNFLLS-----GDNAHRSYNEPWTMKRDLLRAG 101
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ ++I L+ T + + + +++ +H +R+ ++ I
Sbjct: 102 IPAENISLDYAGFRTLDSIVRAKEIFDTDNFL---IITQRFHCERALFIARYQDIQASCL 158
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+++ ++ L+E A
Sbjct: 159 AVPGPSSHSGF----------KVRLREVFARAYA 182
>gi|313884387|ref|ZP_07818148.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620171|gb|EFR31599.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
Length = 236
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/228 (12%), Positives = 69/228 (30%), Gaps = 29/228 (12%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ + + + ++ L + ++ + L + D +V
Sbjct: 3 ALFKFIQILAKGSAYLILAFLALVIMINL---AMIAYGYSRTVVIDQLQSKGYGDQVPVV 59
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G EPS R+ + ++++ I GD + E
Sbjct: 60 VLGAGVINNE-------EPSQILKLRLDKAYQVFEEAPDRK-----FIMSGDHLQDNYNE 107
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
V N L++ G+ + I L+ T+ + ++ I ++ YHL R+
Sbjct: 108 VAVMKNYLIDKGIPANQIYLDHVGTSTYNT---IYRLKHVLKIDKAIFITQNYHLSRTLY 164
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G+ + + + +E + +
Sbjct: 165 IAKQLGVQALGVAAQETYS-----------TRFQRESREILARIKDVL 201
>gi|91217293|ref|ZP_01254254.1| hypothetical protein P700755_08017 [Psychroflexus torquis ATCC
700755]
gi|91184636|gb|EAS71018.1| hypothetical protein P700755_08017 [Psychroflexus torquis ATCC
700755]
Length = 198
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 77/199 (38%), Gaps = 14/199 (7%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+++ ++ Y + I +LG G + P +PA+ + S SR+ E +R+
Sbjct: 1 MIVTTIEKHYSVLDPQALDQNKTYFIHVLGAGYNLNPDLPALT-QLGSTSLSRLSEGIRV 59
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
++ + ++++ + +++ V +E GV I++ T + AQ
Sbjct: 60 FRL-----LDKPVLVTSAYSKYGLESQASVTRKAAIELGVSSQHIRMLENPSTTLEEAQA 114
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN--AYYSI----IPLS 217
S +I+ + A H+ R+ ++ G A+ +++ + +P
Sbjct: 115 FKSRFG--TSAQVIIATDAMHMSRAMDIYRDLGYEPIAAPTNFQVHFGPKAYNGLSMPSY 172
Query: 218 ANFYLTELALKEYIGILIA 236
+F L+ + +
Sbjct: 173 QSFQLSNRIFRTVLKQGYY 191
>gi|194446096|ref|YP_002039329.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194404759|gb|ACF64981.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 206
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + I + + + + ++ G G +
Sbjct: 2 KYRYITRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 54 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 162
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 163 SSPTRSTRYKSWW-------AQTRFLLRETFYYSGYRL 193
>gi|261364338|ref|ZP_05977221.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
gi|288567599|gb|EFC89159.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
Length = 197
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 78/212 (36%), Gaps = 24/212 (11%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+F + + + L + + L + + V+L T +
Sbjct: 6 LVFILVLFFTAALLPLWIMWRDFWVSRLDADTVRPADAAVVLS-------TRAYEGGRLN 58
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+R+ + LY++ K ++ G + + + + GV + DI
Sbjct: 59 PCLVARVEAAVELYRARKVKK-----LVMTGGVSRDLQSSAGNMQMIAEKMGVSKADIIQ 113
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH--FGINTKASCSDYLN 208
E ++ +TF+N FS I+N +++VS+ +HL R+++ G + + + + +
Sbjct: 114 EREAGNTFENIVFSRKFIENS--PRVVIVSAGFHLARARMMADRQWQGHDIQVYAAPFCS 171
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Y + L+E + +G
Sbjct: 172 EPYGGYGFT--------VLRESAAFVKNALKG 195
>gi|330828173|ref|YP_004391125.1| SanA protein [Aeromonas veronii B565]
gi|328803309|gb|AEB48508.1| SanA protein [Aeromonas veronii B565]
Length = 315
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 55/174 (31%), Gaps = 24/174 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ V+LG + P+ RI LY + K II
Sbjct: 42 DKVPYNRVAVVLGTSKYLSGGG------PNHYFKYRIKAAAELYNNAKVD-----FIIVS 90
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD E L+++G+ I ++ T + + + + +VS
Sbjct: 91 GDNATVQYNEPRQMRRALIKAGIPASAIYMDFAGFRTLDSVVRAKEVFGQ---ERFTVVS 147
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+H +R+ +HFGI+ ++ + + ++E L
Sbjct: 148 QGFHNERAIFIARHFGIDAVGFNAEDPS----------AYQGIRTRVREVFARL 191
>gi|311029687|ref|ZP_07707777.1| hypothetical protein Bm3-1_03874 [Bacillus sp. m3-13]
Length = 192
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 83/222 (37%), Gaps = 36/222 (16%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ ++ + ++ MLL I ++ L + + K + +++LG
Sbjct: 4 KKRVKTLMKITMVMLLIYII--------IVHSLIYQ----TAKQEPPKGVDYLIVLGARV 51
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
A+ R+ + K + +I SGG + E+
Sbjct: 52 KGEVMTKALLF--------RVEAALEYLKENP----NTKVIASGGQGPGEDITEAEAMRR 99
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ G++ + I LE +S TF+N +S +++++ G ++ +VS+ +H+ R+ L +
Sbjct: 100 YFVKHGIKEERIILEDRSTTTFENLSYSKALMED--GASVAIVSNDFHMYRASLIGKRLD 157
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ P A F L +EY + +
Sbjct: 158 FAEV-------HTLAGKTPKIAIFKLWS---REYFAVAKTWI 189
>gi|330464951|ref|YP_004402694.1| hypothetical protein VAB18032_04840 [Verrucosispora maris
AB-18-032]
gi|328807922|gb|AEB42094.1| hypothetical protein VAB18032_04840 [Verrucosispora maris
AB-18-032]
Length = 250
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 64/172 (37%), Gaps = 21/172 (12%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++++LG T P IR+ R+ L + + +++SG
Sbjct: 70 DEAPVADVVIVLGTAVTEDGRQPGIRL------AGRLETAAELVRQQRARV----VLVSG 119
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + + + GV+ I + LDT+ + + + + + ++V+
Sbjct: 120 DGHGASGDETAAMTAHLTEQLGVDPQRIVADPYGLDTYDSCRRAREVYG---VERALIVT 176
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+YHL R+ + G++ + ++ E A+++Y
Sbjct: 177 QSYHLSRAVTLCRQLGVDADGVPARCTGCGTGLL--------LEKAVRDYFA 220
>gi|255655858|ref|ZP_05401267.1| hypothetical protein CdifQCD-2_09204 [Clostridium difficile
QCD-23m63]
gi|296450861|ref|ZP_06892611.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296879136|ref|ZP_06903131.1| conserved hypothetical protein [Clostridium difficile NAP07]
gi|296260332|gb|EFH07177.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296429679|gb|EFH15531.1| conserved hypothetical protein [Clostridium difficile NAP07]
Length = 248
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 93/239 (38%), Gaps = 35/239 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ I LI+ +K+F+ +++ F+ ++ L+
Sbjct: 34 LVVGIILIIYQIFKKKIKEKKVFYRVLKIIISVFLIVFVVTESLI--------IFYPKNS 85
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LG + PS R+ + + + +C +++SGG
Sbjct: 86 LESKSDYLLILGASVK--------KTIPSTTLKGRLNTAL----KYLKVNDNCYVVVSGG 133
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKNI 176
+ E+ + L+++G++++ I E +S +T++N ++S I+ +
Sbjct: 134 KGSGENITEAKAMKDYLIKNGIDKNRIIEEDKSTNTYENFKYSKFKIEERSERKLSDLKV 193
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+V++ +H+ RS++ G + + + S +P +E+ +
Sbjct: 194 KIVTTDFHVLRSKILAYRNGYKNTSFYAS--KSKLSFVPTYYT--------REFFALWK 242
>gi|325284148|ref|YP_004256689.1| hypothetical protein Deipr_1940 [Deinococcus proteolyticus MRP]
gi|324315957|gb|ADY27072.1| protein of unknown function DUF218 [Deinococcus proteolyticus MRP]
Length = 212
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 26/183 (14%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
PL P+ K +V+LG PA ++ R+ + LY++ T
Sbjct: 23 PLGVPREKPHPT-LVVLGAAQYAGRPSPAFQV--------RLDHALELYRAG----GVHT 69
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+++GG E V + L GV + +K E +S T QN +++ ++
Sbjct: 70 IVVTGGRQAGDPYTEGGVGVSYLQRRGVPAEVLKAEERSRTTAQNLNYAAELLPPH--AA 127
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +V+ H R+ + G N AS S + P ++ L+E +
Sbjct: 128 VTVVTDRAHAPRALAMARDIGFNANASPSP-------LWPHAS----LRYRLRERLAWAA 176
Query: 236 AYY 238
Sbjct: 177 YML 179
>gi|303249806|ref|ZP_07336010.1| SanA protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307251995|ref|ZP_07533896.1| hypothetical protein appser6_5150 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651373|gb|EFL81525.1| SanA protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860687|gb|EFM92699.1| hypothetical protein appser6_5150 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 229
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 28/222 (12%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
C SI + F ++F + + + V+L
Sbjct: 15 LWKRCLSICPRIALVSFGIVFLLSITVFVIDYATGI--YVKDNIYTDIEKLPKHRNAVVL 72
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G P + + R+ ++L K ++ GD + E
Sbjct: 73 GTSKFYAKGTPNLYYKY------RLEAAVQLINKGKA-----KTLLVSGDNKTPYYNEPK 121
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V N L + G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 122 VMLNDLYKMGIPKNIIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERALFIA 178
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ IN + Y + + L+E++ +
Sbjct: 179 KYHNINAVCFAAKYPEGHIKVR------------LREFLARI 208
>gi|261391563|emb|CAX48996.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
8013]
Length = 218
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L F + + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAV----YRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 60 AAAWDK--------RPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|331085682|ref|ZP_08334765.1| hypothetical protein HMPREF0987_01068 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406605|gb|EGG86110.1| hypothetical protein HMPREF0987_01068 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 241
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 87/233 (37%), Gaps = 35/233 (15%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
FL+ + H + ++ I F+ F F +I + L K
Sbjct: 42 FLLAAIVHFSPRWLQYILLTLNFIAYFVFFAVQVIICSAMLTL------------PPKKL 89
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG +++ R+ + K + +++SGG +
Sbjct: 90 DVIIVLGAQVRGKKITNSLK--------RRLDRGVAYLKENPET----RVVVSGGQGKGE 137
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E+ L+ G+ + I LE +S +T++N ++S +++ + I +VS+ +H+
Sbjct: 138 DVTEAFAMAQYLVSHGIAEEQISLEEKSRNTYENLKYS-ALLVDSMDDRIGIVSNNFHIY 196
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
RS L + G Y I ++E+ ++ Y
Sbjct: 197 RSLLLGRQIGY----------TRLYGIAAGCNPILFLNYMVREFFAVMRMYLT 239
>gi|325474935|gb|EGC78121.1| SanA protein [Treponema denticola F0402]
Length = 226
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 20/189 (10%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I+KI F+ IG I +L +Y +P + V++
Sbjct: 1 MKSKPIKKIALCIIFLFALILIGIVSINIYML-----NYSKPYIYKNISALPEKYVVIVP 55
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + S RI + K+ K ++ GD + G E
Sbjct: 56 GAKV------YKNTVSHVVRDRIEAAVNCLKNKKAER-----VLISGDHGRKGYDEVNRM 104
Query: 135 NNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + G + + I ++ T++ + + ++ ++V+ A+H R+ +
Sbjct: 105 RIFMQDIYGTDENLIFMDHAGFSTYETMYRAREIF---CIEDAVVVTQAFHTARAVYIGR 161
Query: 194 HFGINTKAS 202
G++ A
Sbjct: 162 KLGLDVIAY 170
>gi|323359408|ref|YP_004225804.1| hypothetical protein MTES_2960 [Microbacterium testaceum StLB037]
gi|323275779|dbj|BAJ75924.1| uncharacterized conserved protein [Microbacterium testaceum
StLB037]
Length = 337
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 74/181 (40%), Gaps = 21/181 (11%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + IV+LG+G P +R R+ + ++ + +
Sbjct: 149 YAALPAPRRPRAIVVLGSGLIRGEVPPLLRG--------RLDRAIAAWRRAVRAGGAAPV 200
Query: 117 II-SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGK 174
++ SGG E L + G+ D I+ ET+SL+T +N +FS ++ G
Sbjct: 201 LVPSGGQGPDEPRPEGEAMAEYLRDQGIPGDLIRPETRSLNTRENLEFSRVIVDGIDGGG 260
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++V+S YH+ R+ L + + + +A +++ L+EY+ +L
Sbjct: 261 PVLIVTSDYHMLRAGLLARRRIPRARVVGA-----------RTAAYFVPSAFLREYVALL 309
Query: 235 I 235
Sbjct: 310 A 310
>gi|260665181|ref|ZP_05866030.1| integral membrane protein [Lactobacillus jensenii SJ-7A-US]
gi|260560918|gb|EEX26893.1| integral membrane protein [Lactobacillus jensenii SJ-7A-US]
Length = 363
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 92/239 (38%), Gaps = 31/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ W++ ++W L + I ++ + + I + I+ L Y +
Sbjct: 124 LIGLWLYQKFTHWLHLPPYLAPILGLAPTIATYLIIVM--LSFIINVFLYQFYPKKYCE- 180
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS-CKQHSMHCTIIIS 119
N +++LG G + S +RI ++ K K+ II+S
Sbjct: 181 ------NYLIVLGAGLING-------TKVSTLLANRINASINYAKKVKKKTGNWPKIIMS 227
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNI 176
GG L+E+ +++G+ R+ I LE QS T +N FS +I+ +
Sbjct: 228 GGQGPDEELSEAAAMAEYAIKAGIPREIIILENQSTTTLENMTFSKKIIEKDTKTKPYTC 287
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ + + ++ + + +YL L+E+ I +
Sbjct: 288 KFFSNNYHIFRAAILAKKANLSANGVGA-----------PTRLYYLPNALLREFAAIFV 335
>gi|297559448|ref|YP_003678422.1| hypothetical protein Ndas_0469 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843896|gb|ADH65916.1| protein of unknown function DUF218 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 201
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 56/179 (31%), Gaps = 18/179 (10%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ + + L + +R + + + V+LG
Sbjct: 1 MGLWIAAVGAGACALALGPYAWTFLGSAGRRGEVDTVPHRP--VAVVLGAAAWNDG---- 54
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
PS R+ +RLY++ + II GD ++ E+ L+ GV
Sbjct: 55 ----PSPLLARRLDLAVRLYENGRVER-----IIVSGDNREVSRRETDTMTAYLVAQGVP 105
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
D I + T+ + + V+ ++HL R+ + GI+
Sbjct: 106 ADRIDADRHGYRTWDTCVRVRDLFGVREATM---VTQSFHLPRTVALARAAGIDAVGVG 161
>gi|302524814|ref|ZP_07277156.1| predicted protein [Streptomyces sp. AA4]
gi|302433709|gb|EFL05525.1| predicted protein [Streptomyces sp. AA4]
Length = 329
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 82/190 (43%), Gaps = 24/190 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y + +V+LG+G P + SR+ +++ +Q S
Sbjct: 145 YSILYSRVTRRLRAAAVVVLGSGLQGDRVPPLL--------ASRLDRAVQV----QQRSP 192
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+++SGG +E+ L+E+GV + + LE ++ T +N +FS +++
Sbjct: 193 GAVLVVSGGQGADELTSEAAAMARYLVEAGVPEEQLVLEDRATTTSENLRFSVALLAERG 252
Query: 173 GKNIIL-VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
IL V++ YH+ R+ + + G+ + +A++++ L+E++
Sbjct: 253 FSGPILAVTNNYHVFRTAVLARQLGLRLNVIGA-----------RTASYFVPSAFLREFV 301
Query: 232 GILIAYYRGN 241
+L+ Y + N
Sbjct: 302 ALLVEYRKTN 311
>gi|194448844|ref|YP_002044067.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205359241|ref|ZP_02668425.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194407148|gb|ACF67367.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205337510|gb|EDZ24274.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 249
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 26/218 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 45 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 96
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 97 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 145
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q GI+++
Sbjct: 146 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSR 205
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S + T L+E
Sbjct: 206 SSPTRSTRYKSWW-------AQTRFLLRETFYYSGYRL 236
>gi|296118003|ref|ZP_06836585.1| putative integral membrane protein with DUF218 domain protein
[Corynebacterium ammoniagenes DSM 20306]
gi|295968889|gb|EFG82132.1| putative integral membrane protein with DUF218 domain protein
[Corynebacterium ammoniagenes DSM 20306]
Length = 359
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 88/215 (40%), Gaps = 29/215 (13%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
F + ++L I + + + ++R P+ +++LG+G P
Sbjct: 144 FALHLSVVLIVLYFGFIFAAFIAAFVLYRWRRYRTEPE------AVIVLGSGLINGEVPP 197
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ +R+ +++ + K+ S H II SGG E + LL GV
Sbjct: 198 LL--------AARLDKSLEV---QKKFSNHPVIITSGGQGSDEPRPEGEAMRDYLLSKGV 246
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
E + ET+S +T +N FS ++ + + ++ +S+YH+ R+ L + G+
Sbjct: 247 EPARVVAETESRNTEENLHFSRKLLTDPSDQV-VVATSSYHVFRAALLTRTLGMRAHVVG 305
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +A +Y L+E++GI+
Sbjct: 306 A-----------RTAWYYFPSALLREFVGIIRDRL 329
>gi|256831370|ref|YP_003160097.1| hypothetical protein Jden_0119 [Jonesia denitrificans DSM 20603]
gi|256684901|gb|ACV07794.1| protein of unknown function DUF218 [Jonesia denitrificans DSM
20603]
Length = 348
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 89/250 (35%), Gaps = 44/250 (17%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + V + ++ Q + S L+ + G + +L +++ + ++
Sbjct: 97 IALMCAPVVPFAMISQHSPGRIWAS----LWLVMIIGYLGFAFTCYLAYTFLYAAVPERF 152
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG+ P + SR+ + LY + I++SGG
Sbjct: 153 I--SSYIVVLGSELDGDQVTPVL--------ASRLNYAITLYANYSAFHGETAIVVSGGT 202
Query: 123 PQKH------------------GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
P+ +AE+ + L G+ DI +E +L T N S
Sbjct: 203 PEPPTDAPAQSPESAPVAPGPASVAEAHAMRDYLTNHGIPARDIVVEDTALTTEDNLIQS 262
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
++ + +V+S YH+ R+ + G+ + P F L
Sbjct: 263 -RLLIPEPDAPLAVVTSNYHVYRTTTLARQLGVRAHVYGA----------PTPRGF-LAG 310
Query: 225 LALKEYIGIL 234
L+E+ IL
Sbjct: 311 SLLREFAAIL 320
>gi|28871767|ref|NP_794386.1| hypothetical protein PSPTO_4635 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855019|gb|AAO58081.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 189
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 81/213 (38%), Gaps = 31/213 (14%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+ ++ L S I+ LL K ++ ++LG+ T
Sbjct: 3 TIYLTLLSLGTLFILSASLL--------VIDGVSDTAKTSDVAIVLGSKVTPD------- 47
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG-VER 145
PS + +R+ + LY+ + + II G G +E++ N L E + R
Sbjct: 48 GVPSARLQARLDRAVELYRQGRVRN-----IIVSGGTGVEGFSEAVGMANYLAERSGLPR 102
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ I L+ Q T A+ S+ ++K K+ ++V+ +H+ RS+ G+ ++
Sbjct: 103 EAILLDEQGNTTKDTARNSAQIMKQRGFKSAVVVTQYFHITRSRYALYQAGVTQVSTAHA 162
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + L+ +E + ++
Sbjct: 163 RYFEWRDLYSLA----------REVAALPAYWW 185
>gi|302336857|ref|YP_003802063.1| protein of unknown function DUF218 [Spirochaeta smaragdinae DSM
11293]
gi|301634042|gb|ADK79469.1| protein of unknown function DUF218 [Spirochaeta smaragdinae DSM
11293]
Length = 240
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 70/230 (30%), Gaps = 26/230 (11%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ + + + + ++ + F + + + + +R S
Sbjct: 17 AILIFRFMKRKSFIVVGIAIICVFFLLLILMLFIDRSISVVAR--ERLYDSISEVPSVKT 74
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
++LG + RI L+ + K ++ GD +
Sbjct: 75 ALVLGTSRYRPGGKTNLYFRY------RIEAAKALFDAGK-----VRYLLVSGDNARKSY 123
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E + L+E GV D I L+ T + + I+VS +H +R+
Sbjct: 124 NEPVEMRQALVEMGVPIDRIVLDYAGFRTLDSVVRCQEVFGQDHF---IIVSQRFHNERA 180
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+HFGI+ A + + Y +EY + A
Sbjct: 181 LYIARHFGIDAVAFNAKDVGGYSGRRIRG----------REYFARVKALL 220
>gi|94313597|ref|YP_586806.1| hypothetical protein Rmet_4675 [Cupriavidus metallidurans CH34]
gi|93357449|gb|ABF11537.1| conserved hypothetical protein; putative membrane protein
[Cupriavidus metallidurans CH34]
Length = 270
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 77/225 (34%), Gaps = 28/225 (12%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ ++ L+ + + +H++ + IV+LG+G
Sbjct: 69 WRQWLWRAGWAGLIVWLVSV----AMFFQHMRHGIADLAPNASAAGAPVAIVILGSG--- 121
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ E S +R+ E ++ S+ + G E+ + + L
Sbjct: 122 -----SPNCEVSPTLAARLDEGLQQASRFPAASVVVSGGQDFGRLP---CTEAGIMGDYL 173
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSM---IKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L G+ + + E +S T +N QFS + +++V+S +HL R++ +
Sbjct: 174 LAHGLVPERLIREDRSTSTAENMQFSREVLARHGVRATDPVLVVTSDFHLLRAERIARKA 233
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G T + + Y L+EY + + G
Sbjct: 234 GFTTLSGAAAATPLYIRY----------NAWLREYFAYISGWVLG 268
>gi|318058341|ref|ZP_07977064.1| hypothetical protein SSA3_10385 [Streptomyces sp. SA3_actG]
gi|318079249|ref|ZP_07986581.1| hypothetical protein SSA3_21722 [Streptomyces sp. SA3_actF]
Length = 335
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 80/223 (35%), Gaps = 26/223 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + + G+ + L + ++ + +V+LG G
Sbjct: 119 RTLLVLAGTITAIAGYFGFLFACVLAYAFL-------YGHVRVRRRTDYVVVLGAGLLGG 171
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
S +R+ + ++ + +++SGG L E+ +
Sbjct: 172 E-------RVSPLLAARLDRGLSAHRKLTKRGREPLLLLSGGKGGDEALPEAEAMARYVR 224
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
E G + E S T +N + S +++ K G ++V+S YH+ R+ + + G+
Sbjct: 225 EKGFPERLLVREEHSATTGENLRNSHALMAKARPGYRCVVVTSNYHVFRTAVTARRVGVR 284
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ +A ++ ++E++ +L+ Y R N
Sbjct: 285 GHVVGA-----------PTAPYFWPSATIREFVALLVDYRRTN 316
>gi|157149755|ref|YP_001450471.1| GdmH [Streptococcus gordonii str. Challis substr. CH1]
gi|157074549|gb|ABV09232.1| GdmH [Streptococcus gordonii str. Challis substr. CH1]
Length = 340
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 106/261 (40%), Gaps = 44/261 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF--------FMSCFMLLFSFIGWGIIPTILLKHLQFS 52
++ S +FL+ + ++ +++ L F+ + +L+ F+
Sbjct: 74 IIFSTVFLLFNGRQMMSFEGKRLGNLLSLLYGIFIIGALALHFLPYFPGKDLLIYPTDFA 133
Query: 53 -------------YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
Y + + + I++LG+G P + R+ +
Sbjct: 134 LFYSTFLYLSYVLYGTFCNYFPVRIEPDAIIVLGSGLIGDKVPPLL--------AQRLTK 185
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+Y+ + +I+SGG +E+ N L+E GV++D I +E +S TF+
Sbjct: 186 GKTIYEQFEGR---PKLIVSGGQGADELTSEAAAMANYLMEQGVQKDAILIENRSRTTFE 242
Query: 160 NAQFSSSMIKNMQGKNIILV-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
N FS ++++ +LV ++++H R+ ++ + I S+ +A
Sbjct: 243 NLTFSKAILEEQGLGKSVLVVTNSFHALRAGVFMRRLKI-----------PGRSVGSKTA 291
Query: 219 NFYLTELALKEYIGILIAYYR 239
+YL ++E +G++ Y++
Sbjct: 292 FYYLPSAWIRETVGLVSLYWK 312
>gi|320093548|ref|ZP_08025440.1| protein of hypothetical function DUF218 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319979504|gb|EFW10974.1| protein of hypothetical function DUF218 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 338
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 87/239 (36%), Gaps = 32/239 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSI---RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
+ L + + ++ L S+ + + MLL ++ W + L Y
Sbjct: 92 LPLLFGVAVAGWFAALPLSVGLHAPEWVLGAAMLLTAWGAWFFMSFTALLL----YSTFY 147
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
K+ + I++ G G P +R RI +RL+ ++
Sbjct: 148 RLLPRKRVYDYIIIHGAGLNGEEPTPLLRG--------RIETAIRLWDRQ---GRRAVLV 196
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGK 174
SGG ++E+ + L +GV + I E +S T +N F+ +I+
Sbjct: 197 PSGGQGPDEVVSEAEAMHRFLRTNGVGEESILDEDRSTTTMENLVFAKQLIEERQRGFPY 256
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+V+S YH+ R+ Y + GI + +A +Y ++E+I
Sbjct: 257 RCAMVTSDYHVFRTATYARAAGIRGDGVGA-----------KTAFYYFPTAFIREFIAF 304
>gi|320156601|ref|YP_004188980.1| SanA protein [Vibrio vulnificus MO6-24/O]
gi|319931913|gb|ADV86777.1| SanA protein [Vibrio vulnificus MO6-24/O]
Length = 205
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 24/184 (13%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
+ + S + ++ V+LG T I + RI + LY+ K +
Sbjct: 6 KIITSYDQVEGFDVAVVLG-------TSKYIGRTLNTYYTHRIDAAIELYRQNKVQHLLL 58
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ GD E LL++GV +I L+ T + + + +
Sbjct: 59 S-----GDNAHRSYNEPWTMKRDLLKAGVPETNIHLDYAGFRTLDSIVRAKKIFASDHFL 113
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V+ +H +R+ + IN + + + + +E + +
Sbjct: 114 ---IVTQRFHCERALFIANAYQINARCLAVSGPSNSK---------QIWSMRSREVLARV 161
Query: 235 IAYY 238
A+
Sbjct: 162 KAFI 165
>gi|72162724|ref|YP_290381.1| hypothetical protein Tfu_2325 [Thermobifida fusca YX]
gi|71916456|gb|AAZ56358.1| similar to Uncharacterized membrane protein [Thermobifida fusca YX]
Length = 270
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 23/191 (12%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+ L + + + + ++LG G T EP+ R+ LY+
Sbjct: 70 IGWLHLTTAADRYTLGEAPERPVALVLGAGVTP-------EGEPTRLLERRLETAAELYR 122
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
S + + ++ GD + E+ V + L+ +GV I + T+++ +
Sbjct: 123 SGRVEA-----LLVSGDNSQEHYNETEVMYDYLVAAGVPAVKIARDYAGFSTWESCVRAR 177
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
++ +++ +V+ +HL R+ + G+ A+ P Y
Sbjct: 178 AVFG---VESVTVVTQTFHLPRAVALCRAAGLEVVGVG---DPAWEDRAPAMLYGYA--- 228
Query: 226 ALKEYIGILIA 236
+E + A
Sbjct: 229 --REVPASVKA 237
>gi|323188468|gb|EFZ73753.1| sanA [Escherichia coli RN587/1]
Length = 230
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKIGC--LLLLIAGATLFIADRVMVNASQQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKAIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFY 186
>gi|46202066|ref|ZP_00208367.1| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 173
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 20/182 (10%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
++ + ++LG PS R+ +RL + K +
Sbjct: 2 MTASPVDSFDAAIILGAMVRPD-------GSPSPALARRVELGVRLARDGKVAH-----L 49
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ G +H E+ V L+SG++ D + +E S +T NA S MI+ ++
Sbjct: 50 LMSGGAVRHTTPEAHVMRAMALQSGLDPDRLHVEDASRNTIGNALMSRPMIEARGWTRLL 109
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+++ A H+ R+ F G+ + + + L+E +
Sbjct: 110 IITDACHMARALYIFHRLGLKARPAAAWPETNP--------GPEWYMAWLREAFALPWTV 161
Query: 238 YR 239
R
Sbjct: 162 IR 163
>gi|307260919|ref|ZP_07542605.1| hypothetical protein appser12_4900 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869486|gb|EFN01277.1| hypothetical protein appser12_4900 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 229
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 69/222 (31%), Gaps = 28/222 (12%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
C I + F ++F + + + V+L
Sbjct: 15 LRKRCLLICPRIALVSFGIVFLLSITIFVIDYATGI--YVKDNIYTDIEKLPKHRNAVVL 72
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G P + + R+ ++L K ++ GD + E
Sbjct: 73 GTSKFYAKGTPNLYYKY------RLEAAVQLINKGKAKK-----LLVSGDNKTPYYNEPK 121
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V N L G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 122 VMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERALFIA 178
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ IN + Y + + L+E++ +
Sbjct: 179 KYHNINAVCFAAKYPEGHIKVR------------LREFLARI 208
>gi|313897329|ref|ZP_07830872.1| conserved hypothetical protein [Clostridium sp. HGF2]
gi|312957699|gb|EFR39324.1| conserved hypothetical protein [Clostridium sp. HGF2]
Length = 192
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 61/145 (42%), Gaps = 12/145 (8%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ Y PQ + ++ ++LG + S +R+ + LYK +
Sbjct: 19 YHYFPTPPKPQSDRVYDVAIVLG-------SPAEEDGSLSRVQKTRMDAAITLYKEKR-- 69
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
I+ G ++ E+ + + + + LE Q+ +T++N ++ ++
Sbjct: 70 ---VRCILISGGSVRNTYTEADIMAAYAIRCSIPSTALLLERQAKNTYENLLYAKTLCDA 126
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHF 195
K++I+V+S +H++R+ + F
Sbjct: 127 HAWKHVIVVTSCFHVRRASYMVRKF 151
>gi|226311001|ref|YP_002770895.1| hypothetical protein BBR47_14140 [Brevibacillus brevis NBRC 100599]
gi|226093949|dbj|BAH42391.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 213
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 69/179 (38%), Gaps = 23/179 (12%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + + ++LG P +R R+ + LYK +
Sbjct: 41 TIEKANARHATVGIVLGAAVWGEGPSPGLR--------ERLEQAAILYKEG----YVSKL 88
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+++GG + + E+ V N L+ G+ +DI LE++S T++N + +++ ++
Sbjct: 89 LVTGGLGEGKTITEAAVSRNYLVAKGIPEEDILLESKSTSTYENLLYGQQVLEEHHIQDA 148
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++S YHL R+ + GI + S + +E + +
Sbjct: 149 LIISHDYHLARAMVMADSLGIVASPVGT-----------TSHVLFGPYHKAREVLALTY 196
>gi|294627587|ref|ZP_06706170.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667213|ref|ZP_06732434.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292598218|gb|EFF42372.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602994|gb|EFF46424.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 183
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 63/186 (33%), Gaps = 13/186 (6%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
++ + + ++I++LG A PS RI +
Sbjct: 3 ALIWLVAVAGWIVWVGDRDQAAPADVIIVLGAA--------AYDARPSPVFEERIRHALD 54
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
LY ++ +GG AES V L G+ D I +ET S T QN +
Sbjct: 55 LYAQG----YAPRLLFTGGFGNGARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNLE 110
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL 222
+ ++++ I+VS H+ R+ Q GI+ AS + + S
Sbjct: 111 QARTLMERHGLHRAIIVSDPLHMARALRLSQELGIDALASSTP-STRFRSFHTSWRFLLQ 169
Query: 223 TELALK 228
Sbjct: 170 EVYYFH 175
>gi|254804041|ref|YP_003082262.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
alpha14]
gi|254667583|emb|CBA03327.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
alpha14]
Length = 218
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 16/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L C +++ L + + Y+ + ++LG
Sbjct: 4 RLFCSRNGLRYYLLGGFCL----SVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 60 AAAWDK--------HPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEV 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 108 GRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAE 167
Query: 194 HFGINTKASCS 204
G+ S +
Sbjct: 168 DLGVRVYMSAT 178
>gi|289811795|ref|ZP_06542424.1| hypothetical protein Salmonellaentericaenterica_48822 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 177
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 10/158 (6%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
+ + V GV R DI + DT + A
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQ 174
>gi|325203138|gb|ADY98591.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
Length = 218
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 12/190 (6%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + + ++L + + + + Y+ + ++LG
Sbjct: 1 MKKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA 60
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS RI + LY Q I+ +GG +K + E+ V
Sbjct: 61 AAWDK--------HPSPVFRERINHAIALY----QSRRVGKIVFTGGRTKKGYMTEAEVG 108
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ GV +I E S +T++N +++ ++++VS YHL R+ +
Sbjct: 109 RRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAED 168
Query: 195 FGINTKASCS 204
G+ S +
Sbjct: 169 LGVRVYMSAT 178
>gi|295835719|ref|ZP_06822652.1| membrane protein [Streptomyces sp. SPB74]
gi|295825649|gb|EDY45722.2| membrane protein [Streptomyces sp. SPB74]
Length = 335
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 28/224 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + +G + + LL Y + ++ + +V+LG G
Sbjct: 118 ARALLVLAGTVTAIAGYFGFLFSCLLA-----YAFLYGHLRVRRRTDYVVVLGAGLLGGE 172
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
S +R+ + ++ + +++SGG L E+ +LE
Sbjct: 173 -------RVSPPLAARLDRGLAALRTLTRRGREPLLLLSGGKGGDETLPEAEAMARYVLE 225
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGIN- 198
G + E S T +N + S +++ K G ++V+S YH+ R+ + + G+
Sbjct: 226 KGFPDRLLVREPDSATTGENLRNSHALMAKAKPGYRCVVVTSNYHVFRTAVTPRRAGVRG 285
Query: 199 -TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + A ++ ++E++ +L Y R N
Sbjct: 286 HVIGAPT-------------ATYFWPSATIREFVALLADYRRTN 316
>gi|190149786|ref|YP_001968311.1| SanA protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|307256494|ref|ZP_07538275.1| hypothetical protein appser10_4990 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|189914917|gb|ACE61169.1| SanA protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|306864904|gb|EFM96806.1| hypothetical protein appser10_4990 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 229
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 77/225 (34%), Gaps = 31/225 (13%)
Query: 15 LLCQSIRKIFFMSC---FMLLFSFIGWGIIPTILLKHLQFSYQR--PLLSPQWKKDGNII 69
L S+ K C ++ F+ + + I ++ + Y + +
Sbjct: 10 LPKTSLWKRCLSICPRIALVSFAIVLFLSIAIFIIDYATGIYVKDNIYTDIEKLPKHRNA 69
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG P + + R+ ++L K ++ GD +
Sbjct: 70 VVLGTSKFYAKGTPNLYYKY------RLEAAVQLINKGKAKK-----LLVSGDNKTPYYN 118
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V N L G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 119 EPKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERAL 175
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ IN + Y + + L+E++ +
Sbjct: 176 FIAKYHNINAVCFTAKYPEGHIKVR------------LREFLARI 208
>gi|324112073|gb|EGC06051.1| hypothetical protein ERIG_03041 [Escherichia fergusonii B253]
Length = 230
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 67/227 (29%), Gaps = 33/227 (14%)
Query: 11 SYWHLLCQS-IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
++ L + + +LL I + + ++ ++ ++
Sbjct: 4 AFARLFRRVCFSRRTLKIACLLLLVAGATIFIADRAMVNASKQLTWSDVNAVPARNVGLL 63
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
+ G + RI LY + K ++ GD +
Sbjct: 64 LGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKNYD 104
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ L+ GV I + T + + + ++S +H +R+
Sbjct: 105 EASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAI 161
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + + L+E + + A
Sbjct: 162 WLAKQYGIDAIGFNAPDLNMKHGLYTQ----------LREKLARVSA 198
>gi|257482212|ref|ZP_05636253.1| hypothetical protein PsyrptA_03022 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 141
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I+ +GG +E+ + L + + S T++NA ++++++ +
Sbjct: 7 LPILTTGGLHFDQPPSEASIMAQSLHDDFGVTARWQEGL-SRTTWENATMTAAVLQPLGI 65
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALK 228
K ++LV+ A+H++R++ F+ G ++ +L + +P S F + + L
Sbjct: 66 KRVVLVTQAWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLN 125
Query: 229 EYIGILIA 236
E G+L+
Sbjct: 126 EAAGLLVY 133
>gi|94969638|ref|YP_591686.1| hypothetical protein Acid345_2611 [Candidatus Koribacter versatilis
Ellin345]
gi|94551688|gb|ABF41612.1| protein of unknown function DUF218 [Candidatus Koribacter
versatilis Ellin345]
Length = 202
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 72/199 (36%), Gaps = 23/199 (11%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ I + F W + +++ + +RP+ + IV+ G
Sbjct: 6 FARRKIAALVLTVVVAGALFFYAWTCV--RVMQQAETDERRPV---------DAIVVFGA 54
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS +R+ + L++ M +I +GG +E V
Sbjct: 55 AEYSG--------RPSPVLKARLDHGLDLFRQ----DMAPFVITTGGAGGDLHFSEGGVG 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ LL++GV + ETQ DT Q+A+ + +++ K + VS AYHL R + +
Sbjct: 103 RDYLLKNGVPDASLIGETQGGDTAQSAERVAVIMRTNGMKTCLAVSDAYHLFRVKRMMEE 162
Query: 195 FGINTKASCSDYLNAYYSI 213
G+ S
Sbjct: 163 QGMECYGSPRPGSVPRTFW 181
>gi|307245277|ref|ZP_07527367.1| hypothetical protein appser1_4840 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307258689|ref|ZP_07540423.1| hypothetical protein appser11_4890 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853818|gb|EFM86033.1| hypothetical protein appser1_4840 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306867242|gb|EFM99096.1| hypothetical protein appser11_4890 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 229
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 29/213 (13%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+I +S + LF I II +++ V+LG
Sbjct: 25 RIALVSFAIALFLSITIFIIDYATGIYVKD---NIYTDINKLPKHQNAVVLGTSKFYAKG 81
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
P + + R+ ++L K ++ GD + E V N L +
Sbjct: 82 TPNLYYKY------RLEAAVQLINKGK-----VKTLLVSGDNKTPYYNEPKVMLNDLYKM 130
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ ++ I+ + T + +S + K + I+VS +H +R+ ++ IN
Sbjct: 131 GIPKNIIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERALFIAKYHNINAVC 187
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ Y + + L+E++ +
Sbjct: 188 FAAKYPEGHIKVR------------LREFLARI 208
>gi|297625646|ref|YP_003687409.1| hypothetical protein PFREUD_04300 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921411|emb|CBL55964.1| Hypothetical membrane protein [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 261
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 21/208 (10%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
++ ++ +++ + +R + ++LG G
Sbjct: 48 VATLAVVAVLTAITAGCNVVVHAVAAGRRRTPGQLHAGVTPDTAMVLGAGVRG------- 100
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTII-ISGGDPQKHGLAESIVYNNKLLESGVE 144
P+ +R+ +RL++ + + + GD E V + L+ GV
Sbjct: 101 -QRPTPYLAARLDLAVRLWREGAISRILVSGWAEAPGDAAGVRYDEPAVMADYLVAHGVA 159
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
R + + LDT+ +A + + +++V+ AYHL R+ + GI+
Sbjct: 160 RGAVLRDPAGLDTWTSAVRARRLHG---LDAMVVVTQAYHLPRALAAARMAGIDALGVAD 216
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIG 232
+ N L+E
Sbjct: 217 TTRD---------HNAKWWRYRLREVPA 235
>gi|223939730|ref|ZP_03631602.1| protein of unknown function DUF218 [bacterium Ellin514]
gi|223891601|gb|EEF58090.1| protein of unknown function DUF218 [bacterium Ellin514]
Length = 343
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 76/245 (31%), Gaps = 37/245 (15%)
Query: 1 MLLSWIFL--IVSYWHLLCQS----IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
+ +S L ++ + + + L + +L
Sbjct: 123 LPISLFILAGLILICRAASRPDFHPAQARATVRTTGLFLLCLLAFPFAQMLC-------- 174
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
+++ ++ V+LG PS R+ +LY+
Sbjct: 175 --FGKTDYRRPADVAVVLGA-------RAYADGRPSDALADRVRTACQLYRDGLVKK--- 222
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+I G P + E+ ++ GV+ DI + L+T + + + +
Sbjct: 223 --LIFSGGPGDGSVHETESMTRMAVQLGVKPQDILTDRAGLNTQATVNNTERLFSQINAR 280
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+I++VS YHL R ++ ++ G + + + +E I
Sbjct: 281 HILVVSHFYHLPRIKMAYRRDGWDVYTVPARETYLLR---------ETPYMMAREVAAIW 331
Query: 235 IAYYR 239
+ Y +
Sbjct: 332 VYYLK 336
>gi|298370494|ref|ZP_06981810.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281954|gb|EFI23443.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 220
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ L F++ + L + + + + Y+ + + V+L
Sbjct: 3 FPLFHSRNGLRFYLLRGIALSILLVLAVFAGNVWQV----YRTGNQTLPAAATADAAVVL 58
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G +PS RI + LY+S + I+ +GG P+K + E+
Sbjct: 59 GAAAWNK--------QPSPVFLERINHAIALYQSHRVG----KIVFTGGTPKKGYMTEAE 106
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V L+ G+ +I E S +T++N + +++ +II+VS YHL R+Q
Sbjct: 107 VGRRYALKQGIPAKNILFENTSRNTYENLRNIKPILRANSVDSIIIVSDPYHLARAQAIA 166
Query: 193 QHFGINTKASCS 204
+ +N + S +
Sbjct: 167 RDLDLNAEVSAT 178
>gi|227537805|ref|ZP_03967854.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227242419|gb|EEI92434.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 187
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 10/159 (6%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P I+++LG S + R+ Y++ M CT
Sbjct: 19 PVNYGMNTIVLILGA-------PNDAMGNLSQIAKDRLDHACNFYQANPDVRMVCTGGFG 71
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
L++ G+ I S +T ++ + S +I + +I++
Sbjct: 72 A-HFNNTEKPHYFYSRKYLIDKGIPDTAILDGPLSTNTVEDFKLSKELISQLNPDILIVI 130
Query: 180 SSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPL 216
+S +H++R+ + ++ F G + + +IPL
Sbjct: 131 TSDFHMQRAGILYRRFIDGAKVLFMPAPSSLSEAELIPL 169
>gi|148544180|ref|YP_001271550.1| hypothetical protein Lreu_0951 [Lactobacillus reuteri DSM 20016]
gi|184153552|ref|YP_001841893.1| hypothetical protein LAR_0897 [Lactobacillus reuteri JCM 1112]
gi|227364609|ref|ZP_03848669.1| conserved hypothetical protein [Lactobacillus reuteri MM2-3]
gi|325682276|ref|ZP_08161793.1| hypothetical protein HMPREF0536_10714 [Lactobacillus reuteri
MM4-1A]
gi|148531214|gb|ABQ83213.1| protein of unknown function DUF218 [Lactobacillus reuteri DSM
20016]
gi|183224896|dbj|BAG25413.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227070353|gb|EEI08716.1| conserved hypothetical protein [Lactobacillus reuteri MM2-3]
gi|324978115|gb|EGC15065.1| hypothetical protein HMPREF0536_10714 [Lactobacillus reuteri
MM4-1A]
Length = 271
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ +R+ + + +C + II+SGG QK +E+ V L+ G+
Sbjct: 119 GQVPPVLATRLDKAI----NCWKTHQSAKIIVSGGIVQKAKESEAEVMAAYLIAHGIPAR 174
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I ETQ+L+T+QN F+ +IK + I++V+S +H+ R++ Y + G+N S
Sbjct: 175 KIICETQALNTWQNLTFARQLIKPQ--ETIVVVTSDFHVLRARAYARKMGLNWSFISSK- 231
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ PL+ +++Y+GI+ ++
Sbjct: 232 --TPWRYCPLT--------FIRDYLGIIRDHW 253
>gi|315640651|ref|ZP_07895756.1| integral membrane protein [Enterococcus italicus DSM 15952]
gi|315483590|gb|EFU74081.1| integral membrane protein [Enterococcus italicus DSM 15952]
Length = 399
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 86/222 (38%), Gaps = 29/222 (13%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
KI F ++L + II L L + + P K + + +++LG G
Sbjct: 177 SPWYIKIPFTYLSIVLGYLLMNFII--FLTATLLYQFYYP------KYNQDFLIVLGAGL 228
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK-QHSMHCTIIISGGDPQKHGLAESIVYN 135
+ RI + Y + + + +I+SGG + E++
Sbjct: 229 INGE-------RVTPLLAKRIDRAILFYHTQRTKSGHPLKLIMSGGQGADEKVPEAVAMK 281
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQ 193
E GV D+ LE S T++N +FS +I+ I VS+ YH+ R+ ++ +
Sbjct: 282 QYACEQGVPESDVLLEANSSTTYENMRFSKELIEQSAVNDPKAIFVSNNYHIFRAGIFAR 341
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ + +A +YL L+E+ IL+
Sbjct: 342 QAKLSAEGIGC-----------KTALYYLPNATLREFAAILV 372
>gi|213418993|ref|ZP_03352059.1| hypothetical protein Salmonentericaenterica_14604 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 184
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 10/158 (6%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYPTW----QGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRANP----GARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
+ + V GV R DI + DT + A
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQ 174
>gi|300775301|ref|ZP_07085163.1| SanA protein [Chryseobacterium gleum ATCC 35910]
gi|300506041|gb|EFK37177.1| SanA protein [Chryseobacterium gleum ATCC 35910]
Length = 214
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 18/153 (11%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+P+ Y+RI LYKS K II GD E L++ GV +
Sbjct: 62 NGQPNAYFYNRIKAAADLYKSGKIQY-----IIVSGDNSTKDYNEPEDMQFALIQEGVPK 116
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
D I L+ T + + + +I++S +H +R+ + G+ +
Sbjct: 117 DKIILDHAGFRTLDSVVRAKDIFSQ---TKLIIISQKFHNERAVFLARKNGMEAFGYNAA 173
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+N Y + ++EY AY+
Sbjct: 174 DVNKYAGLKTN----------MREYAAKAKAYW 196
>gi|26249675|ref|NP_755715.1| hypothetical protein c3844 [Escherichia coli CFT073]
gi|227887811|ref|ZP_04005616.1| membrane protein [Escherichia coli 83972]
gi|300973024|ref|ZP_07172048.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301048072|ref|ZP_07195112.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|26110103|gb|AAN82289.1|AE016767_49 Hypothetical protein ygjQ [Escherichia coli CFT073]
gi|227835207|gb|EEJ45673.1| membrane protein [Escherichia coli 83972]
gi|300300086|gb|EFJ56471.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300410916|gb|EFJ94454.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|315294962|gb|EFU54299.1| conserved hypothetical protein [Escherichia coli MS 153-1]
Length = 233
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 7 AFARLLLRICFSRRTLKIGC--LLLLIAGATLFIADRVMVNASQQLTWSDVNAVPARNVG 64
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 65 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 105
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 106 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 162
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 163 AIWLAKQYGIDAIGFNAPDLNMKHGFY 189
>gi|301163592|emb|CBW23143.1| putative transport-related membrane protein [Bacteroides fragilis
638R]
Length = 212
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 68/215 (31%), Gaps = 26/215 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+KI M +LL + + ++ +Y +S G +
Sbjct: 2 KKIVLMGIPLLLIVLVITIYVCNRTIQKNSETYIYSTVSDIPYNKV--------GLLLGT 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ + + RI LY + K I+ GD +++ E L+
Sbjct: 54 SPKLKSGKANLYFDYRIKAATELYNAGK-----VKYILVSGDNRRNSYNEPEEMKKALIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+G+ I L+ L T + + + + L+S +H +R+ Q +
Sbjct: 109 AGIPDQRIILDYAGLRTLDSVVRAHLIFG---LERFTLISQQFHNERAIYLAQQSHLQAI 165
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ ++AY L+E + +
Sbjct: 166 GYSAQDVSAYAGFKTN----------LRELLARVK 190
>gi|293416524|ref|ZP_06659163.1| ygjQ protein [Escherichia coli B185]
gi|291431880|gb|EFF04863.1| ygjQ protein [Escherichia coli B185]
Length = 230
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 67/229 (29%), Gaps = 34/229 (14%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATLFIADRVMVNASKQLTWSDVNVVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + +GI+ + LN + L+E + + A
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFYTQ----------LREKLARISA 198
>gi|225619978|ref|YP_002721235.1| hypothetical protein BHWA1_01048 [Brachyspira hyodysenteriae WA1]
gi|225214797|gb|ACN83531.1| hypothetical protein BHWA1_01048 [Brachyspira hyodysenteriae WA1]
Length = 273
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 71/192 (36%), Gaps = 16/192 (8%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR--PLLSPQWKKDGNIIVLLGNGTTIIP 80
+ F+S F L I +I ++L Y + S + ++ ++LG +
Sbjct: 41 LIFISLFTFLPEIIILSLISAVILYSSVSLYSKRYIYSSIEEIPYNDVALVLGTSKYLHN 100
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ + R+ LYKS K I+ GD + E L++
Sbjct: 101 GQVNMYFQF------RMEAAYELYKSGK-----VKYILVSGDNRYKSYNEPRQMRLDLIK 149
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV + I L+ T + ++ + + N +VS +H +R+ L + IN
Sbjct: 150 LGVNKKHIFLDFAGFRTRDSIIRANKVFE---LTNFTIVSQPFHNERAILIARQKNINAI 206
Query: 201 ASCSDYLNAYYS 212
A ++ + Y
Sbjct: 207 AYNANNVRKLYR 218
>gi|325922970|ref|ZP_08184680.1| hypothetical protein XGA_3712 [Xanthomonas gardneri ATCC 19865]
gi|325546551|gb|EGD17695.1| hypothetical protein XGA_3712 [Xanthomonas gardneri ATCC 19865]
Length = 205
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 62/213 (29%), Gaps = 29/213 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L ++ ++ L+ I ++I++LG
Sbjct: 14 LWGWGWRLCMLAAIWLVGVAGWIVWIGDR----------------DQAAPADVIIVLGAA 57
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
A PS RI + LY + T G
Sbjct: 58 --------AYDARPSPVFEERIRHALDLYAQGYAPRLLFTGGFGNGARFAESQV----AR 105
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L G+ + I +ET+S T QN Q + ++++ I+VS H+ R+ Q
Sbjct: 106 RYALRHGIPPEAIVIETESRTTRQNLQQARALMERHGMHRAIIVSDPLHMARALRLSQEL 165
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
G++ AS + + S
Sbjct: 166 GVDALASSTP-STRFRSFHTSWRFLLQEVYYFH 197
>gi|295115532|emb|CBL36379.1| Uncharacterized conserved protein [butyrate-producing bacterium
SM4/1]
Length = 275
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 76/208 (36%), Gaps = 50/208 (24%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
KK + +++LG EPS R+ + ++ +++SG
Sbjct: 90 STKKSMDYVIVLGAKVNG--------TEPSNSLKKRLDRAIDYAENNPNTF----LVLSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI------------ 168
G + +AE+ V L +GV + LET+S +T +N ++S +I
Sbjct: 138 GQGKDEEIAEAEVMYEYLRYNGVPETQLLLETRSTNTRENIRYSLEVIRSQEQWKERVFQ 197
Query: 169 --------------KNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSI 213
+ +I +++S +HL R++ + G+ N +
Sbjct: 198 QIFKEVGENAYAPGDELDSIHIGILTSDFHLFRAKAIAKKQGVRNVYGISA--------- 248
Query: 214 IPLSANFYLTELALKEYIGILIAYYRGN 241
S + L L+E IL + GN
Sbjct: 249 --PSDPLLIPNLWLRECFAILKDKFMGN 274
>gi|332882613|ref|ZP_08450225.1| protein SanA [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679413|gb|EGJ52398.1| protein SanA [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 212
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + +P+ RI ++LY++ K I+ GD ++ E
Sbjct: 56 GLLLGTNPYLKNGQPNKYFLYRIEAAVQLYEAKKIQY-----ILVSGDNHRNDYNEPEEM 110
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L++ GV +I L+ T + + + + +++S +H +R+ QH
Sbjct: 111 KKALMQRGVPEANIILDYAGFRTLDSVVRAKKVFGK---ERFLIISQRFHNQRALYLAQH 167
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I + + AYY + ++EY+ +
Sbjct: 168 HHIEAVGFNAQDVTAYYGLKTR----------VREYLARFKLFI 201
>gi|323439958|gb|EGA97673.1| hypothetical protein SAO11_1094 [Staphylococcus aureus O11]
Length = 322
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 82/187 (43%), Gaps = 24/187 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + K+ +II++LG G P + +R+ + +Y+
Sbjct: 134 WTVSYRHRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQAS--- 182
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II+SG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+
Sbjct: 183 ATKIIVSGRQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLY 242
Query: 173 GKNIILV--SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
K + +V +S +H+ R+ Q G++ S Y+ + + +K+Y
Sbjct: 243 HKAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS--HTPYHFFL---------HVLIKDY 291
Query: 231 IGILIAY 237
+G++ Y
Sbjct: 292 LGVMYQY 298
>gi|309775431|ref|ZP_07670434.1| putative periplasmic protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308916820|gb|EFP62557.1| putative periplasmic protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 193
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 73/170 (42%), Gaps = 21/170 (12%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
++ +++F I+ + Y P+ + + ++LG +
Sbjct: 4 LAAILIVFLIAANLIL---------YHYFPKPKKPKAGRVYDAAIVLG-------SPAKE 47
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
S +R+ +RLY+ II G ++ AE+ + + G+ +
Sbjct: 48 DGSLSRLQKTRMDAAIRLYRQHTVQR-----IIISGGSVRNDYAEAEIMAAYAITCGIAK 102
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ + LE ++ +T++N +++ + + ++++V+S++H++R+ + F
Sbjct: 103 EVLLLERKARNTYENLKYAKEICIAHEWHSVVVVTSSFHVRRASYMVRKF 152
>gi|78045951|ref|YP_362126.1| hypothetical protein XCV0395 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325929410|ref|ZP_08190538.1| hypothetical protein XPE_4644 [Xanthomonas perforans 91-118]
gi|78034381|emb|CAJ22026.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540185|gb|EGD11799.1| hypothetical protein XPE_4644 [Xanthomonas perforans 91-118]
Length = 183
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 13/186 (6%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
++ + + ++I++LG A PS RI +
Sbjct: 3 ALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAA--------AYDARPSPVFEERIRHALD 54
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
LY ++ +GG AES V L G+ + I +ET S T QN +
Sbjct: 55 LYAQG----YAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLE 110
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL 222
+ ++++ I+VS H+ R+ Q GI+ AS + + S
Sbjct: 111 QARTLMERHGLHRAIIVSDPLHMARALRLSQELGIDALASSTP-STRFRSFHTSWRFLLQ 169
Query: 223 TELALK 228
Sbjct: 170 EVYYFH 175
>gi|21229858|ref|NP_635775.1| hypothetical protein XCC0380 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66766735|ref|YP_241497.1| hypothetical protein XC_0392 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188989803|ref|YP_001901813.1| hypothetical protein xccb100_0407 [Xanthomonas campestris pv.
campestris str. B100]
gi|21111359|gb|AAM39699.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572067|gb|AAY47477.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167731563|emb|CAP49738.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 205
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 60/213 (28%), Gaps = 29/213 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L ++ ++ L+ + ++I++LG
Sbjct: 14 LWGWGWRLCMLALIWLVGVAGWIVWVGDR----------------DQAAPADVIIVLGAA 57
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
A PS RI + LY + T G
Sbjct: 58 --------AYDARPSPVFEERIRHALDLYARGYAPHLLFTGGFGNGARFAESQV----AR 105
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L GV + I +ET S T QN + ++++ I+VS H+ R+ Q
Sbjct: 106 RYALRHGVPSEAIVIETSSRTTRQNLLQARALMERHGMHRAIIVSDPLHMARALRLCQEL 165
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
G++ AS + + S
Sbjct: 166 GVDALASSTP-STRFRSFHTSWRFLLQEVYYFH 197
>gi|289664371|ref|ZP_06485952.1| hypothetical protein XcampvN_15203 [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289668148|ref|ZP_06489223.1| hypothetical protein XcampmN_06538 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 205
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 67/213 (31%), Gaps = 29/213 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L ++ ++ L+ I ++I++LG
Sbjct: 14 LWGWGWRLCMLALIWLVAVAGWIVWIGDR----------------DQAAPADVIIVLGAA 57
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
A PS RI + LY ++ +GG AES V
Sbjct: 58 --------AYDARPSPVFEERIRHALDLYAQG----YAPRLLFTGGFGNGARFAESQVAR 105
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L G+ + I +ET S T QN + + ++++ I+VS H+ R+ Q
Sbjct: 106 RYALRHGIPPEAIVIETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMARALRLSQEL 165
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
GI+ AS + + S
Sbjct: 166 GIDALASSTP-STRFRSFHTSWRFLLQEVYYFH 197
>gi|149920330|ref|ZP_01908800.1| hypothetical protein PPSIR1_08516 [Plesiocystis pacifica SIR-1]
gi|149818772|gb|EDM78214.1| hypothetical protein PPSIR1_08516 [Plesiocystis pacifica SIR-1]
Length = 221
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 27/190 (14%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ + ++++LG PS R+ + LY+S +
Sbjct: 31 TRAEPKTHALDDAPAREVVLVLGARVHGD--------RPSNMLEDRLAAALELYESGRAQ 82
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ + G + E V L + GV DD+ L+ L T + + +
Sbjct: 83 KLILS-----GAHHRDDYDEVTVMRRWLEDRGVPPDDLYLDHAGLRTLDSMVRAREVFGV 137
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKAS--CSDYLNAYYSIIPLSANFYLTELALK 228
+ +VS +HL R+ + G++T A + Y A A +
Sbjct: 138 ERLA---VVSQDFHLPRAVYLGEQVGMDTIAVVAPAGYRYAEK---------VHRYNAAR 185
Query: 229 EYIGILIAYY 238
E++ A+
Sbjct: 186 EHLARTRAWL 195
>gi|238855462|ref|ZP_04645772.1| integral membrane protein [Lactobacillus jensenii 269-3]
gi|282932170|ref|ZP_06337620.1| putative membrane protein [Lactobacillus jensenii 208-1]
gi|238831952|gb|EEQ24279.1| integral membrane protein [Lactobacillus jensenii 269-3]
gi|281303710|gb|EFA95862.1| putative membrane protein [Lactobacillus jensenii 208-1]
Length = 363
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 92/239 (38%), Gaps = 31/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ W++ ++W L + I ++ + + I + I+ L Y +
Sbjct: 124 LIGLWLYQKFTHWLHLPPYLAPILGLAPTIATYLIIVM--LSFIINVFLYQFYPKKYCE- 180
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS-CKQHSMHCTIIIS 119
N +++LG G + S +RI ++ K K+ II+S
Sbjct: 181 ------NYLIVLGAGLING-------TKVSTLLANRINASINYAKKVKKKTGNWPKIIMS 227
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNI 176
GG L+E+ +++G+ R+ I LE QS T +N FS +I+ +
Sbjct: 228 GGQGPDEELSEAAAMAEYAIKAGIPREIIILENQSTTTLENMTFSKKIIEKDTKTKPYTC 287
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ + + ++ + + +YL L+E+ I +
Sbjct: 288 KFFSNNYHIFRAAILAKKANLSANGVGA-----------PTRLYYLPNALLREFAAIFV 335
>gi|325957712|ref|YP_004293124.1| hypothetical protein LAC30SC_10460 [Lactobacillus acidophilus 30SC]
gi|325334277|gb|ADZ08185.1| hypothetical protein LAC30SC_10460 [Lactobacillus acidophilus 30SC]
Length = 367
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 79/241 (32%), Gaps = 29/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL--LKHLQFSYQRPLL 58
+++ ++ LI S L+ ++S L + +
Sbjct: 116 LIVGFVVLIFSILVLVGPGKYLPHWLSA-----LLASIPATALYLGLVLYNFLLNLLLYQ 170
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + +++LG G + S +RI ++ Q III
Sbjct: 171 IYPRRYKQDYLIVLGAGLLNGD-------QVSKLLAARINRAIQFSNRQYQKGRKRPIII 223
Query: 119 SGGDP-QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
G + E + GV D I +E QS +T+QN FS + G
Sbjct: 224 MSGGQGPDEKIPEGLAMARFAQHRGVPTDQILIEDQSKNTYQNMLFSKRVATKDFGSEKF 283
Query: 178 ---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
S+ YH+ R+ L + G+ + + +YL ++E+ G+
Sbjct: 284 RATFFSNNYHIIRAALLAKEVGLKANGVGAF-----------TRLYYLPNAIIREFAGVF 332
Query: 235 I 235
+
Sbjct: 333 V 333
>gi|317506557|ref|ZP_07964352.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
gi|316255154|gb|EFV14429.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
Length = 330
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
IV LG G T+P + + R+ +T+ + ++ I+ G ++
Sbjct: 167 TTIVALGAGLHPDGTMPQVLV-------DRLRKTLEVAQADPAAP-----IVVTGGKPQN 214
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
G+ E+ + L+ GV+ I E S T QNA S+ ++++++ ++++V+SA H++
Sbjct: 215 GVTEADAMADWLVGQGVDPGRIHKEDHSASTVQNALNSAEILRSLRPAHLVIVTSANHVR 274
Query: 187 RSQLYFQ 193
R+ F+
Sbjct: 275 RASALFE 281
>gi|260768719|ref|ZP_05877653.1| SanA protein [Vibrio furnissii CIP 102972]
gi|260616749|gb|EEX41934.1| SanA protein [Vibrio furnissii CIP 102972]
Length = 235
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 64/211 (30%), Gaps = 28/211 (13%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
LL G I + Q + + + V+LG + T+ I
Sbjct: 2 SLTLLACIAGIYGIDRWVSWQTQDH---IISNIYNVPKFQVAVVLGTSKYLGRTLNDYYI 58
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
RI + L++ K + + GD E LL++GV +
Sbjct: 59 H-------RINAAIDLFEQGKVNGFLLS-----GDNAHRSYNEPWTMKRDLLKAGVPNEQ 106
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I L+ T + + + +++ +H +R+ H IN
Sbjct: 107 IYLDYAGFRTLDSIVRAKRIFDTDNFL---IITQRFHCERALFIANHHDINATCLAV--- 160
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
P N ++ L+E A++
Sbjct: 161 -------PGPTNHSGFQVRLREVFARTKAFF 184
>gi|283796161|ref|ZP_06345314.1| conserved hypothetical protein [Clostridium sp. M62/1]
gi|291076380|gb|EFE13744.1| conserved hypothetical protein [Clostridium sp. M62/1]
gi|295092203|emb|CBK78310.1| Uncharacterized conserved protein [Clostridium cf. saccharolyticum
K10]
Length = 275
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 76/207 (36%), Gaps = 48/207 (23%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
KK + +++LG EPS R+ + ++ +++SG
Sbjct: 90 STKKSMDYVIVLGAKVNG--------TEPSNSLKKRLDRAIDYAENNPNTF----LVLSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI------------ 168
G + +AE+ V L +GV + LET+S +T +N ++S +I
Sbjct: 138 GQGKDEEIAEAEVMYEYLRYNGVPETQLLLETRSTNTRENIRYSLEVIRSQEQWKERVFQ 197
Query: 169 --------------KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
+ +I +++S +HL R++ + G+ Y I
Sbjct: 198 QIFKEVGENAYAPGDELDSIHIGILTSDFHLFRAKAIAKKQGV----------RNVYGIS 247
Query: 215 PLSANFYLTELALKEYIGILIAYYRGN 241
S + L L+E IL + GN
Sbjct: 248 APSDPLLIPNLWLRECFAILKDKFMGN 274
>gi|225568744|ref|ZP_03777769.1| hypothetical protein CLOHYLEM_04823 [Clostridium hylemonae DSM
15053]
gi|225162243|gb|EEG74862.1| hypothetical protein CLOHYLEM_04823 [Clostridium hylemonae DSM
15053]
Length = 201
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 75/213 (35%), Gaps = 21/213 (9%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L ++ + + +F + I + ++RP + +V
Sbjct: 3 LYKAKKTAGILGRLTAVFLLLNICIFTAV--------FRRPKRRWKKHTYDCAVVCG--- 51
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS +R+ + L + K ++ + G + E+ V
Sbjct: 52 -----YYAEEDGSPSPFMRTRVEKGAGLLREGKVKALLLS-----GGAVSNSHVEAEVMR 101
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ L+ GV D I E +S+ T+ N ++S +++ K+ ++V++ +HL+++ Y F
Sbjct: 102 DHALKLGVPADVIYTEPRSVSTYHNMKYSKALMSENGLKDCVVVTNGWHLRKADHYAGKF 161
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
++ +D + +
Sbjct: 162 RMDHVMCRADDPTGQTWRTKIMLYIKTWWNMYR 194
>gi|116630379|ref|YP_819532.1| hypothetical protein LGAS_1839 [Lactobacillus gasseri ATCC 33323]
gi|238852784|ref|ZP_04643190.1| integral membrane protein [Lactobacillus gasseri 202-4]
gi|282850700|ref|ZP_06260075.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|311111615|ref|ZP_07713012.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116095961|gb|ABJ61113.1| hypothetical protein LGAS_1839 [Lactobacillus gasseri ATCC 33323]
gi|238834634|gb|EEQ26865.1| integral membrane protein [Lactobacillus gasseri 202-4]
gi|282558108|gb|EFB63695.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|311066769|gb|EFQ47109.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 373
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/241 (16%), Positives = 91/241 (37%), Gaps = 30/241 (12%)
Query: 1 MLLSWIFLIVSYWHL--LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
++ ++ + + + L + + + L +F ++ LL + +
Sbjct: 123 IIGLFLVALWTLYRLGVFHKLPGWLHSLVAGAALIAFYLLFVMYNFLLNLVLYQ------ 176
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTII 117
+ + +++LG G + + SRI + + +I
Sbjct: 177 IVPRRYKQDYLIVLGAGLINGKKVSRL-------LGSRIDRAIAFSNKQYDKGHKRPKLI 229
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG + L+E+ N ++ G + D I LE +S +T+QN +S ++ G +
Sbjct: 230 MSGGQGKDEDLSEAEAMKNYAVKRGYDPDLILLEDKSTNTYQNMIYSKAVAIKDYGSDKF 289
Query: 178 ---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ YHL R+ LY + + S + ++L ++E+ G+
Sbjct: 290 KAKFFTNNYHLFRAGLYAKMAHLKANGIGS-----------TTRFYFLPNATIREFAGVF 338
Query: 235 I 235
I
Sbjct: 339 I 339
>gi|222034815|emb|CAP77558.1| Uncharacterized protein ygjQ [Escherichia coli LF82]
gi|307555191|gb|ADN47966.1| hypothetical protein YgjQ [Escherichia coli ABU 83972]
gi|312947655|gb|ADR28482.1| putative thioredoxin-like protein [Escherichia coli O83:H1 str. NRG
857C]
Length = 230
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKIGC--LLLLIAGATLFIADRVMVNASQQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFY 186
>gi|315180420|gb|ADT87334.1| sanA protein [Vibrio furnissii NCTC 11218]
Length = 235
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 64/211 (30%), Gaps = 28/211 (13%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
LL G I + Q + + + V+LG + T+ I
Sbjct: 2 SLTLLACIAGIYGIDRWVSWQTQDH---IISNIYNVPKFQVAVVLGTSKYLGRTLNDYYI 58
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
RI + L++ K + + GD E LL++GV +
Sbjct: 59 H-------RINAAIDLFEQGKVNGFLLS-----GDNAHRSYNEPWTMKRDLLKAGVPNEQ 106
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I L+ T + + + +++ +H +R+ H IN
Sbjct: 107 IYLDYAGFRTLDSIVRAKRIFDTDNFL---IITQRFHCERALFIANHHDINATCLAV--- 160
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
P N ++ L+E A++
Sbjct: 161 -------PGPTNHSGFQVRLREVFARTKAFF 184
>gi|255009581|ref|ZP_05281707.1| putative transport-related membrane protein [Bacteroides fragilis
3_1_12]
gi|313147358|ref|ZP_07809551.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313136125|gb|EFR53485.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 212
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 69/215 (32%), Gaps = 26/215 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+KI F+ +LL + + ++ +Y +S G +
Sbjct: 2 KKIIFIGAPLLLTVLVITIYVCNRTIQKNSEAYLYSTVSDIPYNKV--------GLLLGT 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ + + RI LY + K I+ GD +++ E L+
Sbjct: 54 SPKLKNGKNNLYFDYRIKAATELYNAGK-----IKYILVSGDNRRNDYNEPEEMKQALIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+G+ I L+ L T + + + + L+S +H +R+ Q +
Sbjct: 109 TGIPEQQIILDYAGLRTLDSVIRAHLIFG---LERFTLISQEFHNERAIFLAQQNHLQVI 165
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ ++AY L+E + +
Sbjct: 166 GYNAQDVSAYAGFKTN----------LRELLARVK 190
>gi|60682122|ref|YP_212266.1| putative transport-related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|253567093|ref|ZP_04844544.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265764260|ref|ZP_06092828.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|60493556|emb|CAH08343.1| putative transport-related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|251944217|gb|EES84726.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263256868|gb|EEZ28214.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 212
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 68/215 (31%), Gaps = 26/215 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+KI M +LL + + ++ +Y +S G +
Sbjct: 2 KKIVLMGIPLLLIVLVITIYVCNRTIQKNSETYIYSTVSDIPYNKV--------GLLLGT 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ + + RI LY + K I+ GD +++ E L+
Sbjct: 54 SPKLKSGKANLYFDYRIKAATELYNAGK-----VKYILVSGDNRRNSYNEPEEMKKALIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+G+ I L+ L T + + + + L+S +H +R+ Q +
Sbjct: 109 AGIPDQRIILDYAGLRTLDSVVRAHLIFG---LERFTLISQQFHNERAIYLAQQSHLQAI 165
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ ++AY L+E + +
Sbjct: 166 GYNAQDVSAYAGFKTN----------LRELLARVK 190
>gi|187736193|ref|YP_001878305.1| protein of unknown function DUF218 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426245|gb|ACD05524.1| protein of unknown function DUF218 [Akkermansia muciniphila ATCC
BAA-835]
Length = 217
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 24/181 (13%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
R + + +++LG P P+ ++R+ L+K K
Sbjct: 33 RIVEHSRDVPVRAPVLVLGC-------SPTFMGSPNGYFHNRMDTASELWKDGKA----- 80
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
T+ I GD H E L+E GV + I + L T + +
Sbjct: 81 TVFIVSGDNSSHAYNEPEWMKQALVERGVPEERIVCDFAGLRTLDSVVRMKEIFG---VS 137
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+I+VS +H +R+ H G+ A + + S + +E +
Sbjct: 138 TMIVVSQEFHNERALAIAAHEGMAAWAVSAPDVPNRRSRMKSW---------FRERAARV 188
Query: 235 I 235
Sbjct: 189 W 189
>gi|300362750|ref|ZP_07058925.1| integral membrane protein [Lactobacillus gasseri JV-V03]
gi|300353178|gb|EFJ69051.1| integral membrane protein [Lactobacillus gasseri JV-V03]
Length = 373
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 90/241 (37%), Gaps = 30/241 (12%)
Query: 1 MLLSWIFLIVSYWHL--LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
++ ++ + + + L + + + L +F ++ LL + +
Sbjct: 123 IIGLFLVALWTLYRLGVFHKLPGWLHSLVAGAALIAFYLLFVMYNFLLNLVLYQ------ 176
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTII 117
+ + +++LG G + + SRI + + +I
Sbjct: 177 IVPRRYKQDYLIVLGAGLIDGKKVSRL-------LGSRIDRAIAFSNKQYDKGHKRPKLI 229
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG + L+E+ + ++ G + D I LE +S +T+QN +S ++ G
Sbjct: 230 MSGGQGKDEDLSEAEAMKDYAVKRGYDPDLILLEDKSTNTYQNMVYSKAVAIKDYGNEKF 289
Query: 178 ---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ YHL R+ LY + + + + ++L ++E+ G+
Sbjct: 290 KVKFFTNNYHLFRAGLYAKMAHLKANGIGA-----------TTRFYFLPNATIREFAGVF 338
Query: 235 I 235
I
Sbjct: 339 I 339
>gi|153008321|ref|YP_001369536.1| hypothetical protein Oant_0986 [Ochrobactrum anthropi ATCC 49188]
gi|151560209|gb|ABS13707.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 302
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 84/238 (35%), Gaps = 43/238 (18%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+++ ++ + + ++ + + +LL +G+ + + P +
Sbjct: 86 FLWSVMM---RMFRRLQPVSIVLFVILLAFLVGFVAFGEKVTS---------MQPPAIDE 133
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ I++L G SRI + L K + + + +
Sbjct: 134 PADAIIVLTGG------------------QSRIQAAVDLLKDKRGKRLLISGVHPA--TN 173
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ L + + L + V+ D +L+T NA S I+ + +ILV++ YH
Sbjct: 174 EKALQRATHADQSLFDCCVDLDR-----SALNTIGNATESERWIRTNNYRRVILVTNNYH 228
Query: 185 LKRS--QLYFQHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ RS ++ ++ + + +S + + + EY+ L A R
Sbjct: 229 IPRSTLEMSYRMKDVEFIPYPVVNGDRREHSWVSEGDTLRVLFI---EYVKYLGAAVR 283
>gi|53713914|ref|YP_099906.1| hypothetical protein BF2622 [Bacteroides fragilis YCH46]
gi|52216779|dbj|BAD49372.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 212
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 68/215 (31%), Gaps = 26/215 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+KI M +LL + + ++ +Y +S G +
Sbjct: 2 KKIVLMGIPLLLIVLVITIYVCNRTIQKNSETYIYSTVSDIPYNKV--------GLLLGT 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ + + RI LY + K I+ GD +++ E L+
Sbjct: 54 SPKLKSGKANLYFDYRIKAATELYNAGK-----VKYILVSGDNRRNSYNEPEEMKKALIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+G+ I L+ L T + + + + L+S +H +R+ Q +
Sbjct: 109 AGIPDQRIILDYAGLRTLDSVVRAHLIFG---LERFTLISQQFHNERAIYLAQQSHLQAI 165
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ ++AY L+E + +
Sbjct: 166 GYNAQDVSAYAGFKTN----------LRELLARVK 190
>gi|331002899|ref|ZP_08326412.1| hypothetical protein HMPREF0491_01274 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413192|gb|EGG92566.1| hypothetical protein HMPREF0491_01274 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 268
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 94/262 (35%), Gaps = 53/262 (20%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ F+ + L+ + K + + +++ G++ I+ + L + +
Sbjct: 33 VFAFVFFALGKLIKFYLNKRIPLWSVVSVYTLATLGVLIFIITSIV----IALSLPKEDE 88
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ +++LG + P + E S Y R+ + + T II G
Sbjct: 89 SGLDFLIVLG-------SKPDMENEGSQAKY-RLDKAIDYIDKNPD-----TTIIISGGL 135
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII------ 177
+K + ES+ + L+E GV+ ++I +ET+S +T +N +S ++I
Sbjct: 136 RKEEIIESLEMADYLIERGVDANNILVETESHNTRENLIYSKALIDKYNVDMKRNADITI 195
Query: 178 ------------------LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSA 218
++++ +H+ R+ + G + S
Sbjct: 196 VNDVRSVLEVEDRPQTIGILTNDFHIFRAMHVAKKLGYTQVFPIRAG-----------SN 244
Query: 219 NFYLTELALKEYIGILIAYYRG 240
N + ++E IL + G
Sbjct: 245 NILYLHMLVRETFAILKYKFLG 266
>gi|261343423|ref|ZP_05971068.1| protein SanA [Providencia rustigianii DSM 4541]
gi|282568566|gb|EFB74101.1| protein SanA [Providencia rustigianii DSM 4541]
Length = 234
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 62/214 (28%), Gaps = 28/214 (13%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
RK +L I+ + + + ++ ++LG
Sbjct: 2 RKRLLYGLLILAGIAFATVILLDRWIS--WDTAPYIYEDVEQLPARDVGMVLGTSKYYAS 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ +RI Y S K + + GD H E I L++
Sbjct: 60 GATNLYYT------NRIKGAADAYHSGKVKYLLLS-----GDNGAHNYNEPIAMRKDLIK 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV I L+ T + + + +++ +H +R+ +H GI+ +
Sbjct: 109 AGVPASKIVLDFAGFRTLDSVVRTKKVFDTDNFT---IITQRFHCERALFIAKHKGIDAQ 165
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
P + ++E L
Sbjct: 166 CLAV----------PTPDGMFKVR--IREVFARL 187
>gi|323158291|gb|EFZ44368.1| hypothetical protein ECE128010_5377 [Escherichia coli E128010]
Length = 180
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 10/140 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 47 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 101
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 102 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 156
Query: 129 AESIVYNNKLLESGVERDDI 148
+ + V GV R+ I
Sbjct: 157 STAEVGARVAQSLGVPREQI 176
>gi|331659378|ref|ZP_08360320.1| conserved hypothetical protein [Escherichia coli TA206]
gi|315297783|gb|EFU57057.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|331053960|gb|EGI25989.1| conserved hypothetical protein [Escherichia coli TA206]
Length = 230
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 63/207 (30%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKIGC--LLLLIAGATLFIADRVMVNASQQLTWSDVNAVPTRNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + ++ + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKAIFCDYAGFSTLDSVVRANKVFSENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN + +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGLY 186
>gi|229491563|ref|ZP_04385384.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321244|gb|EEN87044.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length = 140
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 12/143 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
G IV+LG G R+ ++L + Q II+
Sbjct: 4 DLNPVGTNIVVLGAGLFDD-------GTMRPMLVDRLQAALQLARQYPQSP-----IITS 51
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G K G+ E+ L+ +GV I E S T +NA S+ ++ + +++VS
Sbjct: 52 GGAPKAGVTEARAMREWLVANGVNPGRITEEGTSWSTVENAINSARILADRGATGVVVVS 111
Query: 181 SAYHLKRSQLYFQHFGINTKASC 203
SA H++R+ + F+ +
Sbjct: 112 SANHVERAMVDFRVAVLGRIPVA 134
>gi|2181195|emb|CAA73878.1| hypothetical protein [Bordetella pertussis]
Length = 179
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 8/156 (5%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
++ +L L L+ Y P L P + IV+LG
Sbjct: 30 FRLRKTGAALIAGGLLWALAWSLPATSLWLGGALESRY--PHLPPDQSPTADAIVVLGGN 87
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T + + R+ L+++ + + + GD ++E+
Sbjct: 88 TANGRANWFLPYDKETAVV-RVDTATELFQAGRASKVVLSGGALEGD-----ISEARGMA 141
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
++ + GV + LE S T++NA + ++
Sbjct: 142 YRMRQHGVPESALILENASRTTYENAALTEDTLRQH 177
>gi|218691389|ref|YP_002399601.1| putative thioredoxin-like [Escherichia coli ED1a]
gi|218428953|emb|CAR09902.2| putative thioredoxin-like [Escherichia coli ED1a]
Length = 230
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 63/207 (30%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKIGC--LLLLIAGATLFIADRVMVNASQQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + ++ + ++S +H +R
Sbjct: 103 YDEAPGMQQALIAKGVPAKAIFCDYAGFSTLDSVVRANKVFSENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN + +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGLY 186
>gi|215488415|ref|YP_002330846.1| predicted thioredoxin-like [Escherichia coli O127:H6 str. E2348/69]
gi|312968569|ref|ZP_07782778.1| sanA [Escherichia coli 2362-75]
gi|215266487|emb|CAS10926.1| predicted thioredoxin-like [Escherichia coli O127:H6 str. E2348/69]
gi|312286787|gb|EFR14698.1| sanA [Escherichia coli 2362-75]
Length = 230
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/207 (13%), Positives = 62/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
L +C S R + +LL I ++ + ++ ++
Sbjct: 4 LFAHLLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDSAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFY 186
>gi|322514334|ref|ZP_08067386.1| SanA protein [Actinobacillus ureae ATCC 25976]
gi|322119769|gb|EFX91805.1| SanA protein [Actinobacillus ureae ATCC 25976]
Length = 235
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 70/226 (30%), Gaps = 31/226 (13%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ--RPLLSPQWKKDGNIIVLLGNGT 76
FF + + +++ Y R N V+LG
Sbjct: 19 KRCGRFFAKSMVCAAWVSVILTLFVLVIDGATGIYVKDRIYTDIDKLPKYNDAVVLGTSK 78
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P + + R+ + L K K ++ GD + E V N
Sbjct: 79 YYAKGSPNLYYKY------RLEAAISLLKHGKVSH-----LLVSGDNKTPYYNEPKVMQN 127
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L G ++ IK + T + + + K + ++V+ +H +R+ ++
Sbjct: 128 DLRRMGARKEQIKQDFAGYRTLDSIVRAREVYK---LEPFVIVTQQFHCERALFIAKYHH 184
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAYYR 239
IN + Y + + ++E+ +G+L +
Sbjct: 185 INAVCFAAKYPEGHIKVR------------IREFFARLGMLWDFLM 218
>gi|325519750|gb|EGC99059.1| hypothetical protein B1M_38501 [Burkholderia sp. TJI49]
Length = 210
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 71/178 (39%), Gaps = 20/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ V+ GN P +R+ +R Y + + C ++ G
Sbjct: 30 PDGPADLAVIFGNALDDN-------GAPKPVLAARLDVGVRCYHAGR-----CPTLLVSG 77
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
GL E+ + L+ GV + I ++ +T AQ + + ++ + ++++VS
Sbjct: 78 AIDGPGLNEAAAMRDYLVARGVPAERIVVDELGDNTLATAQHTLAYMRAQRLSSVLIVSQ 137
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+YHL R++L F+ GI + +D AY P + + +E + R
Sbjct: 138 SYHLARARLAFERVGI----ARADLRAAY----PRGFQWRDLYSSWREVPAYAVYAVR 187
>gi|291517930|emb|CBK73151.1| Uncharacterized conserved protein [Butyrivibrio fibrisolvens 16/4]
Length = 245
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/244 (17%), Positives = 85/244 (34%), Gaps = 45/244 (18%)
Query: 3 LSWIFLIVS-----------YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQF 51
+ WIF + W + ++I+ F + L F+ IL +
Sbjct: 33 IIWIFAAIFWGFLYLMDKKSLWPKIPKAIKYAFRSIVAICLTIFVICQ--GCILTQFF-- 88
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
+ + I++LG PS +R+ + +
Sbjct: 89 --------SKGESGAEYIIVLGAQMR--------DWGPSVVYKARLDSAVEYLNNNP--- 129
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+I++GG ++E LL G+ +D I +E S+DT +N + S+I
Sbjct: 130 -DTKVIVTGGQGANESISEGEGGQEYLLSQGINKDRILVEKDSVDTDENISNALSLIDTD 188
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
I +V++ +H+ R + + ++ + + + YL ++E
Sbjct: 189 NDMKICIVTNNFHVFRGVMIAKR--------YTNAQISGIAAF--TQYQYLPNNMVRETF 238
Query: 232 GILI 235
GIL
Sbjct: 239 GILK 242
>gi|124268119|ref|YP_001022123.1| hypothetical protein Mpe_A2935 [Methylibium petroleiphilum PM1]
gi|124260894|gb|ABM95888.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 266
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 69/187 (36%), Gaps = 10/187 (5%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
I+++G G + + S R+ +RL + +
Sbjct: 83 PPKAEPAPTTAILVIGGGRIPRAPE-SGTADLQPASLERLRYAVRL-SRQTGLPLAFSGG 140
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ G GL+E+ + + +ET S DT +NA+ S + ++I+
Sbjct: 141 LGWGQHDDGGLSEAEIAQRIAERDFLRPIK-WVETASRDTRENARLSVKQLHTAGVRHIV 199
Query: 178 LVSSAYHLKRSQLYFQH-FG--INTKASCSDYLNA----YYSIIPLSANFYLTELALKEY 230
LV+ A+H+ R+ F+ G + A+ Y +P SA F + L+E
Sbjct: 200 LVTHAWHMPRALRAFRQEAGESMQITAAPMGYFVPADRGVLEWLPSSAGFGEVRVVLREL 259
Query: 231 IGILIAY 237
+ + Y
Sbjct: 260 LARGVGY 266
>gi|310287895|ref|YP_003939153.1| hypothetical protein [Bifidobacterium bifidum S17]
gi|309251831|gb|ADO53579.1| conserved hypothetical protein, domain DUF218 [Bifidobacterium
bifidum S17]
Length = 200
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 22/166 (13%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y K+ + I++ G G P+ R+ + + L++ + +
Sbjct: 13 YSTLYRLLPRKRVYDYIIIHGAGLMPD-------GTPTPLLRGRVDKGVALWEKQGKTGV 65
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+ SGG ++E+ L E V D + +E +S T +N +FS ++
Sbjct: 66 ---FVASGGQGSDEVVSEAESMRRYLTESRHVPADAVLMEDRSTTTMENLRFSKEIMDAR 122
Query: 172 QG-----------KNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
G LV+S YH+ R+ Y H G+ Y
Sbjct: 123 SGVQSVPGRRGLAYRCALVTSDYHVFRASEYAHHIGLKADGVRQPY 168
>gi|157162562|ref|YP_001459880.1| putative SanA protein [Escherichia coli HS]
gi|157068242|gb|ABV07497.1| putative SanA protein [Escherichia coli HS]
gi|323941817|gb|EGB37996.1| hypothetical protein ERDG_01592 [Escherichia coli E482]
Length = 227
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 66/225 (29%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ ++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ V I + T + + + ++S +H +R+
Sbjct: 104 SGMQQALIAKDVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + L+E + + A
Sbjct: 161 AKQYGIDAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 195
>gi|331654688|ref|ZP_08355688.1| conserved hypothetical protein [Escherichia coli M718]
gi|331048070|gb|EGI20147.1| conserved hypothetical protein [Escherichia coli M718]
Length = 230
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 67/229 (29%), Gaps = 34/229 (14%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + +GI+ + LN + L+E + + A
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFYTQ----------LREKLARISA 198
>gi|328464062|gb|EGF35549.1| hypothetical protein AAULH_11576 [Lactobacillus helveticus MTCC
5463]
Length = 367
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 86/239 (35%), Gaps = 32/239 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++LS +FL S +L + + + + + + +LL +
Sbjct: 123 LILSLMFLFGSGQYLPRWLSVLLASIPAIAIYLGLVLYNFLINLLLYQI----------Y 172
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG G S +RI ++ Q III
Sbjct: 173 PRRYKQDYLIVLGAGLINGD-------RVSKLLAARINRAIQYSNRQYQKGRKRPIIIMS 225
Query: 121 GDP-QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-- 177
G + E++ + G++ + + +E +S +T+QN FS + G +
Sbjct: 226 GSQGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSNFRS 285
Query: 178 -LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 TFFSNNYHIFRAALLSKEVGLKANGVGAF-----------TRLYYLPNAIIREFAGVFV 333
>gi|191172218|ref|ZP_03033761.1| putative SanA protein [Escherichia coli F11]
gi|300977564|ref|ZP_07173964.1| hypothetical protein HMPREF9553_01084 [Escherichia coli MS 200-1]
gi|190907528|gb|EDV67124.1| putative SanA protein [Escherichia coli F11]
gi|300308254|gb|EFJ62774.1| hypothetical protein HMPREF9553_01084 [Escherichia coli MS 200-1]
gi|324008841|gb|EGB78060.1| hypothetical protein HMPREF9532_01443 [Escherichia coli MS 57-2]
gi|324012056|gb|EGB81275.1| hypothetical protein HMPREF9533_03948 [Escherichia coli MS 60-1]
Length = 230
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 63/207 (30%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKIGC--LLLLIAGATLFIADRVMVNASQQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + ++ + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKAIFCDYAGFSTLDSVVRANKVFSENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN + +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGLY 186
>gi|302869784|ref|YP_003838421.1| hypothetical protein Micau_5339 [Micromonospora aurantiaca ATCC
27029]
gi|302572643|gb|ADL48845.1| protein of unknown function DUF218 [Micromonospora aurantiaca ATCC
27029]
Length = 237
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 56/177 (31%), Gaps = 19/177 (10%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
++ T + + L D + ++LG
Sbjct: 31 AAVMLLGAATVASATWVRGAAEGR----LFDAADVPDTPVALVLGTKVEPD-------GT 79
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P+ +R+ +LY + K +++ GD E L+E GV +
Sbjct: 80 PAPFLAARLEIARQLYAAGKVQ-----VLLLSGDHMDWDYDEPDAMRRWLVERGVPAEKT 134
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
L+ DT+ + + + + +V+ ++HL R+ + GI D
Sbjct: 135 VLDHAGFDTYDSCVRAHRVFGVRR---ATVVTQSFHLPRAVALCRDAGIEAVGVGDD 188
>gi|229827993|ref|ZP_04454062.1| hypothetical protein GCWU000342_00042 [Shuttleworthia satelles DSM
14600]
gi|229792587|gb|EEP28701.1| hypothetical protein GCWU000342_00042 [Shuttleworthia satelles DSM
14600]
Length = 203
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 72/214 (33%), Gaps = 29/214 (13%)
Query: 27 SCFMLLFSFIGWGIIPTILLKH-LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ ++ + + + F+ +R + ++LLG
Sbjct: 3 LLAIFIYILFSLLVFAFAIATGTMLFAARRLQPDRITGHIPDTLILLGCKIRTRSIE--- 59
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
SRI K I SGG + ++E+ L G++
Sbjct: 60 ---------SRIRTAADWMKDHPDTIC----ICSGGQGKDEDISEAEYMKEGLTAQGIDW 106
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ +E S +T +N S +I ++ +G + I+++SA+H R+ + G++ A +
Sbjct: 107 KRLPMERNSTNTRENLALSHRVIASLGRGDSAIIITSAFHCYRAVFLGRREGLHCLALPA 166
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +E + I + +
Sbjct: 167 PNPRKSFLFF-----------YAREVVAIWVTWL 189
>gi|326789428|ref|YP_004307249.1| hypothetical protein Clole_0304 [Clostridium lentocellum DSM 5427]
gi|326540192|gb|ADZ82051.1| protein of unknown function DUF218 [Clostridium lentocellum DSM
5427]
Length = 239
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/232 (17%), Positives = 85/232 (36%), Gaps = 22/232 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+ W+ + + L + I F + F IG + ++ +
Sbjct: 28 MVPVWLGVGIVATLLSFKRIFNKCFRIKLIKAFFAIGILVFV-----GVESFIVWSGVKS 82
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG ++ R+ Q ++SG
Sbjct: 83 VPGEACDFIIVLGAQVRGDTPSVTLQY--------RLESAYDYLMVNPQT----KAVLSG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILV 179
G E+ L+E G+E + + LE QS T++N ++S ++I N+ +V
Sbjct: 131 GQGPDEITTEAEAMRRYLVEKGIEEERLILEEQSTSTYENLKYSFAIIDEIKANSNVSIV 190
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
++ +H+ R+++ G + +Y+ +IP F +KE I
Sbjct: 191 TNRFHVLRARMIASDMGRKVDGIGAK---SYFYLIPN-YYFREFFAVMKEII 238
>gi|239627755|ref|ZP_04670786.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517901|gb|EEQ57767.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 241
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 91/263 (34%), Gaps = 55/263 (20%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+FL+ W+ R ++ ++ G + + + + KK
Sbjct: 7 LLFLVYGRWYYSRNMDRIPRWVPVSVVTTCVAGVVALAVLCVLVFLGAAS------SDKK 60
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + +++LG S R+ + + + +++SGG
Sbjct: 61 NLDYVIVLGARVK--------EHTVSNSLKKRLDKAIEYAEENP----DTILVLSGGRGP 108
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII------- 177
++E+ V L +GV + + +E +S+ T +N +S +I+ + ++
Sbjct: 109 GEDVSEAEVMRQYLEYNGVRPEQLLIEDRSVSTVENIAYSKVVIEEHRNRDKKELVPLTR 168
Query: 178 ------------------LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSA 218
+++S +H+ R++L + +GI N +D + +
Sbjct: 169 RTTSVPYAIAPDKPLEIGVLTSNFHIYRARLTAEKWGIENVYGISADSDPVLFIHLC--- 225
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
++E I+ GN
Sbjct: 226 --------VRECASIVKDRLMGN 240
>gi|241760602|ref|ZP_04758694.1| periplasmic protein [Neisseria flavescens SK114]
gi|241318783|gb|EER55309.1| periplasmic protein [Neisseria flavescens SK114]
Length = 218
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 12/164 (7%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ ++ I L Y+ L + + V+LG PS
Sbjct: 19 LALSVLLVCGIFLAGTWQIYRTGLQTLPKDAHADAAVVLGAAAWDK--------RPSPVF 70
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
RI + LY+S + II +G +K + E+ V L+ G+ +I E
Sbjct: 71 RERINHAITLYQSHRVG----KIIFTGSTSKKGFMTEAEVGRRYALKQGIPAHNILFENT 126
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
S +T++N + ++ +II+VS YHL R++ G+
Sbjct: 127 SRNTYENLRNIIPIMHANGVGSIIVVSDPYHLARAEEMAADLGL 170
>gi|86142614|ref|ZP_01061053.1| hypothetical protein MED217_06861 [Leeuwenhoekiella blandensis
MED217]
gi|85830646|gb|EAQ49104.1| hypothetical protein MED217_06861 [Leeuwenhoekiella blandensis
MED217]
Length = 220
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 18/155 (11%)
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
E S R+ + LY K + GD + E + LLE GV
Sbjct: 62 RRNGELSTMLRDRVESALLLYNKGK-----IKRFLVSGDNRTTNYNEPVAMKKYLLERGV 116
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+DI ++ DT+ + +S + + + I+VS +HL R+ + G+N
Sbjct: 117 PEEDIFMDFAGFDTYDSVYRASYIFE---VDSAIVVSQRFHLPRAVYIARSMGLNFYGYN 173
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
D + +E + A+
Sbjct: 174 GDRR----------EYELESRNRFREVAANVKAWI 198
>gi|293400746|ref|ZP_06644891.1| putative periplasmic protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305772|gb|EFE47016.1| putative periplasmic protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 189
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 21/171 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ F++LF + +L + +P P ++ ++LG
Sbjct: 2 ILLIFIILFVLLANL--------YLYHHFPKPK-HPLQDISYDVAIVLGYPCNAD----- 47
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
S R+ + LY H + + G ++ E+ L +
Sbjct: 48 --GSLSTVQKKRMETAINLYHKHCVHHLLIS-----GSCVQNTYIEAEKMAAYALTQKIP 100
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ I LET++ +T++N +++ + Q +NII+++S H++R+ + F
Sbjct: 101 KQAIVLETKARNTYENLKYAKCICDENQWENIIVITSPSHMRRAAFFVHKF 151
>gi|255036407|ref|YP_003087028.1| hypothetical protein Dfer_2646 [Dyadobacter fermentans DSM 18053]
gi|254949163|gb|ACT93863.1| protein of unknown function DUF218 [Dyadobacter fermentans DSM
18053]
Length = 201
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 31/202 (15%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+F + + + Y S + ++ ++LG +
Sbjct: 2 VFILLCNFWVV-----YCTRQYS--YFSIESLPPNDVALVLGTSKKSEKGTE------NL 48
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
R+ T RL+K K II G+ E + LL G+ + + L+
Sbjct: 49 FFKYRMEATARLFKEGK-----IKYIILSGNNDSQYYNEPLDMQRALLNLGIPENVMTLD 103
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
TF + + ++S +H R+ + GIN + + + Y
Sbjct: 104 YAGFRTFDSIVRCKQVFNQDNFT---VISQNFHNARALYIAHNEGINAISFAAQDVPDGY 160
Query: 212 SIIPLSANFYLTELALKEYIGI 233
S ++EY+
Sbjct: 161 SF----------RTLVREYLAR 172
>gi|302346708|ref|YP_003815006.1| putative protein SanA [Prevotella melaninogenica ATCC 25845]
gi|302150354|gb|ADK96615.1| putative protein SanA [Prevotella melaninogenica ATCC 25845]
Length = 223
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 74/224 (33%), Gaps = 25/224 (11%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ RK + + + +G I+ L + + + + L
Sbjct: 13 MKRNKQRKKQIILSTTAIIALLGTIIL---LCNIIVDKNAKGRTFNDINEVPTMQTALLL 69
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT PS +RI T LYK K + + ++ G E
Sbjct: 70 GTN---PKARDGKRPSSFYMARIKATTELYKHGKFKQLIISG------DKREGYDEPQTM 120
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ L+E GV I ++ Q T + + + +N + N+I++S +H +RS
Sbjct: 121 RHDLIERGVPDSIITMDGQGYRTLLSMRN---IKQNFRVNNMIIISQKWHNERSIFLADK 177
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I +D + +I ++E + + +
Sbjct: 178 MNIKAVGYNADDVRHPRAIWTH----------IRELLARVKLFI 211
>gi|218555654|ref|YP_002388567.1| putative thioredoxin-like [Escherichia coli IAI1]
gi|256018999|ref|ZP_05432864.1| putative thioredoxin-like protein [Shigella sp. D9]
gi|260869837|ref|YP_003236239.1| putative thioredoxin-like protein [Escherichia coli O111:H- str.
11128]
gi|293449423|ref|ZP_06663844.1| ygjQ protein [Escherichia coli B088]
gi|300818854|ref|ZP_07099060.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300821683|ref|ZP_07101829.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300905768|ref|ZP_07123502.1| hypothetical protein HMPREF9536_03759 [Escherichia coli MS 84-1]
gi|301301868|ref|ZP_07208002.1| hypothetical protein HMPREF9347_00430 [Escherichia coli MS 124-1]
gi|307310291|ref|ZP_07589939.1| protein of unknown function DUF218 [Escherichia coli W]
gi|331669890|ref|ZP_08370735.1| conserved hypothetical protein [Escherichia coli TA271]
gi|331679161|ref|ZP_08379833.1| conserved hypothetical protein [Escherichia coli H591]
gi|332280096|ref|ZP_08392509.1| conserved hypothetical protein [Shigella sp. D9]
gi|218362422|emb|CAR00046.1| putative thioredoxin-like [Escherichia coli IAI1]
gi|257766193|dbj|BAI37688.1| predicted thioredoxin-like protein [Escherichia coli O111:H- str.
11128]
gi|291322513|gb|EFE61942.1| ygjQ protein [Escherichia coli B088]
gi|300402367|gb|EFJ85905.1| hypothetical protein HMPREF9536_03759 [Escherichia coli MS 84-1]
gi|300525821|gb|EFK46890.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300528639|gb|EFK49701.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300842849|gb|EFK70609.1| hypothetical protein HMPREF9347_00430 [Escherichia coli MS 124-1]
gi|306909186|gb|EFN39681.1| protein of unknown function DUF218 [Escherichia coli W]
gi|315062392|gb|ADT76719.1| predicted thioredoxin-like [Escherichia coli W]
gi|315257002|gb|EFU36970.1| SanA protein [Escherichia coli MS 85-1]
gi|323377020|gb|ADX49288.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|331062803|gb|EGI34717.1| conserved hypothetical protein [Escherichia coli TA271]
gi|331073226|gb|EGI44549.1| conserved hypothetical protein [Escherichia coli H591]
gi|332102448|gb|EGJ05794.1| conserved hypothetical protein [Shigella sp. D9]
Length = 227
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 67/225 (29%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ ++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + ++S +H +R+
Sbjct: 104 SGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + L+E + + A
Sbjct: 161 AKQYGIDAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 195
>gi|21241154|ref|NP_640736.1| hypothetical protein XAC0380 [Xanthomonas axonopodis pv. citri str.
306]
gi|21106459|gb|AAM35272.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 201
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 67/213 (31%), Gaps = 29/213 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L ++ ++ L+ I ++I++LG
Sbjct: 10 LWGWGWRLCMLALIWLVAVAGWIVWIGDR----------------DQAAPADVIIVLGAA 53
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
A PS RI + LY ++ +GG AES V
Sbjct: 54 --------AYDARPSPVFEERIRHALDLYAQG----YAPRLLFTGGFGNGARFAESQVAR 101
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L G+ D I +ET S T QN + + ++++ I+VS H+ R+ Q
Sbjct: 102 RYALRHGIPPDAIVIETTSRTTRQNLEQARTLMERHGLHRAIIVSDPLHMARALRLSQEL 161
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
GI+ AS + + S
Sbjct: 162 GIDALASSTP-STRFRSFHTSWRFLLQEVYYFH 193
>gi|225869237|ref|YP_002745185.1| membrane protein [Streptococcus equi subsp. zooepidemicus]
gi|225702513|emb|CAX00445.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus]
Length = 327
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 97/258 (37%), Gaps = 51/258 (19%)
Query: 3 LSWIFLIVSYWHLLCQ---SIRKIFFMSCFMLLFS--FIG-------------------- 37
+ +FL + L+ + S R + + +LLF FI
Sbjct: 64 ILLLFLSFNGIRLIKREGLSFRNLLLIGSAVLLFVHPFISRLLLESIGDSKLLRIMYETS 123
Query: 38 -WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
I +L+ + K + I++LG+G P + SR
Sbjct: 124 DLLIFYLLLIVSVYTISSMLNTFYLRKTKEDYIIVLGSGLNGDQVTPLL--------ASR 175
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I + +++Y+ +I+SGG +AE ++ G++ +DI +E QS +
Sbjct: 176 INKGIQVYRKNP----GSKLIMSGGKGADELIAEGEAMCRYAVQQGIKSEDILVENQSRN 231
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T +N FS +I G + LV++ YHL R+ L + + + +
Sbjct: 232 TRENILFSKQLIPA--GASFCLVTNRYHLFRALLLAKELALPCRGYGA-----------K 278
Query: 217 SANFYLTELALKEYIGIL 234
+ ++ ++E +G L
Sbjct: 279 TKLYFSMNAFIREIVGYL 296
>gi|331684739|ref|ZP_08385331.1| conserved hypothetical protein [Escherichia coli H299]
gi|320195248|gb|EFW69877.1| SanA protein [Escherichia coli WV_060327]
gi|331078354|gb|EGI49560.1| conserved hypothetical protein [Escherichia coli H299]
Length = 227
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 67/225 (29%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + +S ++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNTSKQLTWSDVSAVPARNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + ++S +H +R+
Sbjct: 104 SGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + L+E + + A
Sbjct: 161 AKQYGIDAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 195
>gi|331664700|ref|ZP_08365605.1| conserved hypothetical protein [Escherichia coli TA143]
gi|331057948|gb|EGI29930.1| conserved hypothetical protein [Escherichia coli TA143]
Length = 227
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 67/225 (29%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ ++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATLFIADRVMVNTSKQLTWSDVNAVPARNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + ++S +H +R+
Sbjct: 104 SGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + L+E + + A
Sbjct: 161 AKQYGIDAIGFNAPNLNMKHGFYTQ----------LREKLARVSA 195
>gi|183598256|ref|ZP_02959749.1| hypothetical protein PROSTU_01641 [Providencia stuartii ATCC 25827]
gi|188020426|gb|EDU58466.1| hypothetical protein PROSTU_01641 [Providencia stuartii ATCC 25827]
Length = 233
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 64/215 (29%), Gaps = 22/215 (10%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ + +L + + ++ + + ++ ++LG
Sbjct: 2 RKRLLYGLIAILGIALVTIILLDRWI---AWDTAPDIYEDVADLPIRDVGMVLGTSKYYS 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + RI Y S K + + GD H E I L+
Sbjct: 59 SGVQNLYYSY------RIQGAADAYHSGKVKYLLLS-----GDNGAHSYNEPIAMRKDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
++GV I L+ T + + + +++ +H +R+ +H GI+
Sbjct: 108 KAGVPASKIVLDFAGFRTLDSVVRTRKVFDTDNFT---IITQRFHCERALFIAKHKGIDA 164
Query: 200 KASCSD-----YLNAYYSIIPLSANFYLTELALKE 229
+ + + + +E
Sbjct: 165 QCLAVPTPKAMFKVRIREVFARLGALADLYVLNRE 199
>gi|90420238|ref|ZP_01228146.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335572|gb|EAS49322.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 244
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 83/229 (36%), Gaps = 36/229 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + +R++ + + + G + ++ + L P + IV+L
Sbjct: 29 RWMPRGVRRLCLAAVLVGVLL---GGYLAGGFVRFAEE--VSLLAKPAPIGAADGIVVLT 83
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G RI + + L K + + + + G + + +
Sbjct: 84 GG------------------ALRIDQAIDLLKEGRGRRLLISGV-------NPGTSAATL 118
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + + L+ +L+T NA+ + + + +++ILV+S YH+ RS F
Sbjct: 119 ARMTDTDRDLFACCVDLDYAALNTVGNAEIARNWAREQGFRDLILVTSDYHMPRSLREFD 178
Query: 194 HFG--INTKASCSDYLNAYYS-IIPLSANFYLTELALKEYIGILIAYYR 239
G + + + + ++P +A + L EY ++ A R
Sbjct: 179 RIGELRSVTPYAVRRDDLWSAELMPNTAGL---RVLLTEYAKLIAARVR 224
>gi|320352842|ref|YP_004194181.1| hypothetical protein Despr_0715 [Desulfobulbus propionicus DSM
2032]
gi|320121344|gb|ADW16890.1| protein of unknown function DUF218 [Desulfobulbus propionicus DSM
2032]
Length = 212
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 65/188 (34%), Gaps = 20/188 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ I K + L + I W I + + + ++LG
Sbjct: 4 KRISKRMTGAFLFLCVAAIAW---ANITINRYEQ---YTFDHLEQIPPAYCAIVLGT--- 54
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
T + +RI +RLY++ K II GD + H E+ N
Sbjct: 55 ---TKFLKNGRENHYYTNRITAAVRLYRAGKCQK-----IIVSGDNRTHAYNEARDMKND 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+++ GV DI + L T + + +G I+VS +H R+ + +GI
Sbjct: 107 IVKQGVNERDIVCDFAGLRTLDSIVRFKEVFNQQKG---IVVSQKFHNSRAIYIGRSWGI 163
Query: 198 NTKASCSD 205
+D
Sbjct: 164 ELYGYNAD 171
>gi|291541508|emb|CBL14618.1| Uncharacterized conserved protein [Ruminococcus bromii L2-63]
Length = 256
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/235 (19%), Positives = 89/235 (37%), Gaps = 28/235 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFM-LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++L+ + +I+ F F ++F + G I + + S
Sbjct: 39 FLCLWLLCVLIPPVHGAIKAFCFKHLFTKIVFRVVNIGFIAFAVYGAIVTSAMVWATCQA 98
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ IVL P PS RI KS S + ++SGG
Sbjct: 99 PPENSTAIVL------GAQVKPWG---PSVILRGRIDAA----KSYLDDSPNANAVLSGG 145
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVS 180
++E+ N L ES ++ + +E +S +T +N + S +I++ +I +V+
Sbjct: 146 QGSDEVMSEAQCMYNVLTESKIDSSRLYMEDKSTNTTENIRNSMKIIEDNNLNTDITIVT 205
Query: 181 SAYHLKRSQLYFQHFGI--NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+H R+++ GI N A SD + Y+ A++E+ +
Sbjct: 206 DGFHQLRARIICSQLGIKGNVGAVSSD-----------TRLLYVPTYAVREWFAL 249
>gi|218701857|ref|YP_002409486.1| putative thioredoxin-like [Escherichia coli IAI39]
gi|300916707|ref|ZP_07133423.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|218371843|emb|CAR19698.1| putative thioredoxin-like [Escherichia coli IAI39]
gi|300416002|gb|EFJ99312.1| conserved hypothetical protein [Escherichia coli MS 115-1]
Length = 227
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 67/225 (29%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ ++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASKQLTWNDVNAVPARNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + ++S +H +R+
Sbjct: 104 SGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + L+E + + A
Sbjct: 161 AKQYGIDAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 195
>gi|126657368|ref|ZP_01728527.1| Putative SanA protein [Cyanothece sp. CCY0110]
gi|126621355|gb|EAZ92067.1| Putative SanA protein [Cyanothece sp. CCY0110]
Length = 211
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 21/182 (11%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
I ++LG I + + R+ +LY++ K
Sbjct: 29 YSDINQVPKRKIALVLGTSKYI---QQSGETYYNAYYAYRVQAAAKLYQAGKIDG----- 80
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++ GD E L++ GV I + T + + + +N
Sbjct: 81 VLVSGDNSTQFYDEPSQMTQDLIKLGVPSQYITQDYAGFRTLDSIVRAKKVFG---LENY 137
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+VS +H +R+ Q G N A + +F + L+E + A
Sbjct: 138 TIVSQKFHCQRAIYIAQSKGQNPIAFSA----------SNVQSFAGLKTRLREVLARFKA 187
Query: 237 YY 238
+
Sbjct: 188 FL 189
>gi|312883604|ref|ZP_07743329.1| SanA protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368827|gb|EFP96354.1| SanA protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 242
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/228 (13%), Positives = 68/228 (29%), Gaps = 28/228 (12%)
Query: 12 YWHLLCQSIRKIFFMSCFMLL---FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+H ++F+ + F +G + I + + + ++
Sbjct: 4 LFHKDKPKKNWLYFIGKILAWMPMFVVLGCLTLFAIDRWVSYQARDHVYTNMSQIESFDV 63
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
V+LG + + RI ++LY+ K + + GD
Sbjct: 64 AVVLGTSKYLGKILNEYYTH-------RIEAAIQLYQKHKVENFLLS-----GDNAHRSY 111
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E LL++ + +D I L+ T + + + ++S +H +R+
Sbjct: 112 NEPWTMKRDLLKANIPKDKIFLDYAGFRTLDSIVRAKEIFDTDNFL---IISQKFHCERA 168
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I+ K P + + L+E A
Sbjct: 169 IFIANSHNIDAKCFAV----------PGPSRHSGLRVRLREVFARARA 206
>gi|89074929|ref|ZP_01161379.1| Putative SanA protein [Photobacterium sp. SKA34]
gi|89049326|gb|EAR54889.1| Putative SanA protein [Photobacterium sp. SKA34]
Length = 248
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 27/213 (12%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
++ F+ ++ + + R ++ ++LG I T+
Sbjct: 6 LIRISAVICILFVSTLLLFDRWVSA--RTSDRIYHEISTVPKHSVGLVLGTSKYIAKTLN 63
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
RI + LYK K + GD E LL++GV
Sbjct: 64 PYYEY-------RITAALDLYKQGKIDYFLLS-----GDNAHRSYNEPWTMKRDLLKAGV 111
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
D I L+ T + + + + +++ +H +R+ + I +
Sbjct: 112 PDDKIVLDYAGFRTLDSIVRAKEVFEADNFT---IITQQFHCERALFIADTYKIKARCLA 168
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
N ++ ++E + + A
Sbjct: 169 VHEPN----------GTAQLKIRIREVLARVKA 191
>gi|284037116|ref|YP_003387046.1| hypothetical protein Slin_2226 [Spirosoma linguale DSM 74]
gi|283816409|gb|ADB38247.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 222
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 66/217 (30%), Gaps = 26/217 (11%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K L+F ++ + + + + ++ ++LG +
Sbjct: 12 KRVIKLTIALVFIGATVVLVSNWWVVY--NTRNQIYFDIHELPANDVGLVLGTSKFVRTG 69
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ R+ T RL+K K + + G+ E + L++
Sbjct: 70 KE------NLFFRYRMEATARLWKEGKVKYLILS-----GNNDSEYYNEPVDMQRALVKL 118
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ + L+ TF + + + ++S +H R+ H GI A
Sbjct: 119 GIPASVMTLDYAGYRTFDSVVRCKDVFNQEKIT---IISQNFHNARALYIGNHEGIEAIA 175
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + YS ++EY+ A
Sbjct: 176 FAAQDVPDGYSF----------RTLIREYLARPYALL 202
>gi|255592437|ref|XP_002535694.1| conserved hypothetical protein [Ricinus communis]
gi|223522259|gb|EEF26690.1| conserved hypothetical protein [Ricinus communis]
Length = 194
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 59/185 (31%), Gaps = 28/185 (15%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R F + + + I + + +++ GN
Sbjct: 7 PKPFRIAFTFIALSITLAALSLSAIGL----------------NDHIEPADAVIVPGNTV 50
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
S + R+ + ++++ C +I G G+ E+
Sbjct: 51 NPD-------GTLSERLKGRLDAALEIFQAG-----GCKVIFVSGAVGAEGIDEAEAMRR 98
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
LLE GV+ I ++ +T A ++ + ++ VS +H+ R Q + G
Sbjct: 99 YLLERGVDSQAIIQDSSGFNTAATAANAALALHQRGYSKVLAVSQFFHVPRLQWLLEAQG 158
Query: 197 INTKA 201
+N
Sbjct: 159 LNVVG 163
>gi|184155411|ref|YP_001843751.1| hypothetical protein LAF_0935 [Lactobacillus fermentum IFO 3956]
gi|183226755|dbj|BAG27271.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|299783224|gb|ADJ41222.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
5716]
Length = 308
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 76/202 (37%), Gaps = 17/202 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + + + + S ++ +G + ++ +L + L
Sbjct: 84 FFLVGGFLVMVFAPLFPVLWLLWRSVLIVKLMLAIYGYVAVLIDAYLLATVINALPLTIK 143
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
I++LG G P +R R+ + LY+ + +I+SGG
Sbjct: 144 PTK---ILILGAGLIKGGVGPVLR--------RRLLGGLALYQRFPK----AELIMSGGQ 188
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
E++ + + GV I+LET S +T N + I G ++LV+S
Sbjct: 189 GDDEPEPEAVAMHRFARQKGVPESAIRLETNSTNTATNLSEAKRFI--NSGDRVVLVTSD 246
Query: 183 YHLKRSQLYFQHFGINTKASCS 204
YHL RS LY + G+N +
Sbjct: 247 YHLLRSLLYARRQGVNCQGLAV 268
>gi|320661836|gb|EFX29244.1| putative SanA protein [Escherichia coli O55:H7 str. USDA 5905]
Length = 230
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 67/229 (29%), Gaps = 34/229 (14%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + ++ + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRANKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + +GI+ + L I L+E + + A
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLEKGRGKIVR----------LRETLARVSA 198
>gi|330445903|ref|ZP_08309555.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490094|dbj|GAA04052.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 250
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 28/218 (12%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ + +S + + ++ + + R ++ ++LG I
Sbjct: 2 KLLNLIRISAVICILFVSSLLLLDRWVSA---RTSDRIYHDISAVPKHSVGLVLGTSKYI 58
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
T+ RI + LYK K + GD E L
Sbjct: 59 AKTLNPYYEY-------RITAALDLYKQGKIDYFLLS-----GDNAHRSYNEPWTMKRDL 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L++GV D I L+ T + + + +++ +H +R+ + I
Sbjct: 107 LKAGVPDDKIALDYAGFRTLDSVVRAKEVFDADNFT---IITQQFHCERALFIADSYKIK 163
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
N ++ ++E + + A
Sbjct: 164 AICLAVHEPN----------GTAQLKIRIREVLARVKA 191
>gi|194431622|ref|ZP_03063913.1| putative SanA protein [Shigella dysenteriae 1012]
gi|194419978|gb|EDX36056.1| putative SanA protein [Shigella dysenteriae 1012]
gi|320177710|gb|EFW52699.1| SanA protein [Shigella boydii ATCC 9905]
gi|332086758|gb|EGI91896.1| hypothetical protein SD15574_3621 [Shigella dysenteriae 155-74]
Length = 230
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATIFIADRVMVNASKQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFY 186
>gi|50084012|ref|YP_045522.1| hypothetical protein ACIAD0798 [Acinetobacter sp. ADP1]
gi|49529988|emb|CAG67700.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter sp. ADP1]
Length = 221
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 71/223 (31%), Gaps = 34/223 (15%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ + F + I + Q D I++LG+G
Sbjct: 25 VKRWIKFAWFGFWIWLLSVLIFFIYIDHSTQN--------IPKTNDVKAIIVLGSGVENG 76
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+PS R+ K II+SGG + E+ V L
Sbjct: 77 --------QPSAILAERLNTAAHFAKDHPA----ALIILSGGLDHREQQTEAEVMRRYLK 124
Query: 140 ESGVE-RDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRSQLYFQHF 195
+ R+ + LE QS T N + S +++ Q I++V+S +H RS+
Sbjct: 125 QQFPALRNTLALEDQSTSTELNLKNSKPILEQHQILLNDPIVIVTSDFHTIRSKAIAHKQ 184
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Y AY P L+EY + +
Sbjct: 185 ---------QYQQAYMLSSPTPV-MTRYNAWLREYFAFISGWI 217
>gi|57865386|ref|YP_189508.1| hypothetical protein SERP1950 [Staphylococcus epidermidis RP62A]
gi|251811935|ref|ZP_04826408.1| membrane protein [Staphylococcus epidermidis BCM-HMP0060]
gi|282875226|ref|ZP_06284099.1| putative membrane protein [Staphylococcus epidermidis SK135]
gi|57636044|gb|AAW52832.1| membrane protein, putative [Staphylococcus epidermidis RP62A]
gi|251804534|gb|EES57191.1| membrane protein [Staphylococcus epidermidis BCM-HMP0060]
gi|281295991|gb|EFA88512.1| putative membrane protein [Staphylococcus epidermidis SK135]
Length = 318
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ L + I + I + + S+ + Q+ K +I++LG G
Sbjct: 106 PLIIINSLALWAAIIAFSTIYSFIGYL---SWSTAFENHQYYKHVKLIMVLGAGIFSE-- 160
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +R+ + + +Y S II+SGG ++E++ L+
Sbjct: 161 ------EVTTLLAARLDKALSVYHSQ---RTKPIIIVSGGQGPDEPISEALAMKRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINT 199
V + I +E QS +T N +S S+I +M ++ V+S +H+ R+ + + ++
Sbjct: 212 NVPENHIFMENQSTNTRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRALKFAKKAHLSF 271
Query: 200 KASCS 204
S
Sbjct: 272 DGIGS 276
>gi|271967291|ref|YP_003341487.1| hypothetical protein Sros_6010 [Streptosporangium roseum DSM 43021]
gi|270510466|gb|ACZ88744.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 226
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 65/205 (31%), Gaps = 20/205 (9%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ + + L S R + + G ++ A PS
Sbjct: 16 VLLSVLAVAPLTWAWLTSSGHRAVADSAPGWMSG---VPGAPVALVLGAAAWGTTPSPML 72
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ + LY++ K I+ GD + G E V + LL V + L+
Sbjct: 73 ARRLDISAELYRAGK-----VKAILLSGDNSRAGYDEPTVMRDYLLARRVPAGALVLDYA 127
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
DT+ + + + + +V+ +HL R+ + G+ T D + S
Sbjct: 128 GFDTWDSCVRARDVFGA---TRLTVVTQVFHLPRAVALCRAAGLETFGVGDDSARRWVST 184
Query: 214 IPLSANFYLTELALKEYIGILIAYY 238
A +E++ +
Sbjct: 185 Y---------SYAAREFLASAKGFL 200
>gi|167757031|ref|ZP_02429158.1| hypothetical protein CLORAM_02580 [Clostridium ramosum DSM 1402]
gi|237735899|ref|ZP_04566380.1| membrane associated protein [Mollicutes bacterium D7]
gi|167703206|gb|EDS17785.1| hypothetical protein CLORAM_02580 [Clostridium ramosum DSM 1402]
gi|229381644|gb|EEO31735.1| membrane associated protein [Coprobacillus sp. D7]
Length = 190
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
IG+GI+ LL L +++P ++KK I+ I EPS
Sbjct: 5 VIIGFGILN--LLAFLLV-FKKPYKKQRYKKYDCAIICG--------YPANIDGEPSTIM 53
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
SR+ + LYK K +I G K+ E+ + + + GV+++DI +E Q
Sbjct: 54 KSRVEMGVTLYKKDK-----IKFLILSGGAVKNEYQEAKIMASYAISLGVKKEDILIEGQ 108
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
S T+ N +S +++ KN ++V++++HL+++ Y + F ++ + +Y
Sbjct: 109 SRSTYHNLMYSRDIMQINGLKNALVVTNSWHLRKADHYARKFKLDYAMVSASAPKSYCW 167
>gi|262275794|ref|ZP_06053603.1| putative SanA protein [Grimontia hollisae CIP 101886]
gi|262219602|gb|EEY70918.1| putative SanA protein [Grimontia hollisae CIP 101886]
Length = 219
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 73/220 (33%), Gaps = 28/220 (12%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
S+RK FF+ ++ F + ++ + + + R +I ++LG I
Sbjct: 2 SLRKAFFV---IMTFVVASFIVVAAMDVWVSFQAKDRIFTRVDDTPTRHIGLVLGTSKYI 58
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
T + RI LY + K +++ GD E +
Sbjct: 59 GKT-------LNPYYTHRIDAAQDLYLNKKVD-----VLLLSGDNAHRSYNEPWTMKRDM 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L++G+ + I L+ T + + + + LV+ A+H +R+ + I+
Sbjct: 107 LKAGIPDEKIFLDYAGFRTLDSIIRAKKVFDADEFT---LVTQAFHCERALFIADFYDID 163
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
P ++ +E + + A
Sbjct: 164 AICLAV----------PSPGGMAGVKIRAREALARVKAVL 193
>gi|293367067|ref|ZP_06613739.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291318797|gb|EFE59171.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733884|gb|EGG70208.1| putative membrane protein [Staphylococcus epidermidis VCU028]
gi|329735064|gb|EGG71360.1| putative membrane protein [Staphylococcus epidermidis VCU045]
Length = 318
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 90/230 (39%), Gaps = 37/230 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFM---------SCFMLLFSFIGWGII----PTILLK 47
++++ I L++ Y ++ + F + F + + +I + L
Sbjct: 58 IIVAMILLLIKYRYIFKLQTGRFFILQLSHHFYTVGLFAVSYLYISTIPLIIINSLALWA 117
Query: 48 HLQF-----------SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+ S+ + Q+ K +I++LG G E + +R
Sbjct: 118 AIIAFSTIYSFIGYLSWSTAFENHQYYKHVKLIMVLGAGIFSE--------EVTTLLAAR 169
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + + +Y S II+SGG ++E++ L+ V + I +E QS +
Sbjct: 170 LDKALSVYHSQ---RTKPIIIVSGGQGPDEPISEALAMKRYLIAHNVPENHIFMENQSTN 226
Query: 157 TFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKASCS 204
T N +S S+I +M ++ V+S +H+ R+ + + ++ S
Sbjct: 227 TRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRALKFAKKAHLSFDGIGS 276
>gi|27468856|ref|NP_765493.1| membrane protein [Staphylococcus epidermidis ATCC 12228]
gi|27316404|gb|AAO05579.1|AE016750_184 membrane protein [Staphylococcus epidermidis ATCC 12228]
Length = 318
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 79/185 (42%), Gaps = 16/185 (8%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ L + I + I + + S+ + Q+ K +I++LG G
Sbjct: 106 PLIIINSLALWAATIAFSTIYSFIGYL---SWSTAFENHQYYKHVKLIMVLGAGIFSE-- 160
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +R+ + + +Y S II+SGG ++E++ L+
Sbjct: 161 ------EVTTLLAARLDKALSVYHSQ---RTKPIIIVSGGQGPDEPISEALAMKRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINT 199
V + I +E QS +T N +S S+I +M +++ V+S +H+ R+ + + ++
Sbjct: 212 NVPENHIFMENQSTNTRTNFLYSKSIIHSMMPTSNHMLCVTSQFHVLRALKFAKKAHLSF 271
Query: 200 KASCS 204
S
Sbjct: 272 DGIGS 276
>gi|134103151|ref|YP_001108812.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915774|emb|CAM05887.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 196
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 18/177 (10%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII---VLLGNGTTIIPTIPAIRIE 88
+G + +L LQ++ R + +D ++LG G
Sbjct: 6 WLVALGGFALAAFVLLPLQWALARSAGRIRTAEDVPATEFGLVLGAGVRYD-------GR 58
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS R+ + L+++ + +I G P G +E +V + L+ GV +D+
Sbjct: 59 PSRILQGRLNVALALHRAGRVRR-----LIVSGSPHSRGYSEPVVMRDYLVARGVPPEDV 113
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
L+ +DT +A+ ++ +V++ +HL+RS F+ GI+T D
Sbjct: 114 LLDESGVDTCSSARAAARTFGLRAIT---VVTTNFHLRRSVALFRRAGIDTYGVGHD 167
>gi|224585025|ref|YP_002638824.1| hypothetical protein SPC_3298 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224469553|gb|ACN47383.1| hypothetical protein SPC_3298 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 230
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 34/227 (14%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ LC R+ ++CF+L+ + + L+ + + ++ +++
Sbjct: 8 FIRRLCF-TRRALTVACFLLVAAAVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLG 65
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD K E
Sbjct: 66 AKPG--------------NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEP 106
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + + ++S A+H +R+
Sbjct: 107 SAMQQALIAKGVPEAAIFCDYAGFSTLDSVVRARKVFGENRIT---IISQAFHNQRAIWL 163
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q +GI+ + LN + T L+E + + A
Sbjct: 164 AQQYGIDAIGVNAPDLNKRHG----------TYTRLREKLARVSAVL 200
>gi|218706710|ref|YP_002414229.1| putative thioredoxin-like [Escherichia coli UMN026]
gi|293406697|ref|ZP_06650623.1| SanA protein [Escherichia coli FVEC1412]
gi|298382440|ref|ZP_06992037.1| ygjQ protein [Escherichia coli FVEC1302]
gi|300901472|ref|ZP_07119555.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|218433807|emb|CAR14724.1| putative thioredoxin-like [Escherichia coli UMN026]
gi|291426703|gb|EFE99735.1| SanA protein [Escherichia coli FVEC1412]
gi|298277580|gb|EFI19096.1| ygjQ protein [Escherichia coli FVEC1302]
gi|300355110|gb|EFJ70980.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 227
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 67/225 (29%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ ++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNTSKQLTWSDVNAVPARNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + ++S +H +R+
Sbjct: 104 SGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + L+E + + A
Sbjct: 161 AKQYGIDAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 195
>gi|294672924|ref|YP_003573540.1| hypothetical protein PRU_0141 [Prevotella ruminicola 23]
gi|294472636|gb|ADE82025.1| conserved domain protein [Prevotella ruminicola 23]
Length = 447
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI +LYK+ K I+ISG + G+ E + L+ GV I L+ +
Sbjct: 58 RIDAAEQLYKAGKIEQ----ILISGDENSLDGVNEPECMRDSLVARGVPSSAIILDGKGY 113
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + ++ + K+ ++S +H +R+ +H G++ + + AY + +P
Sbjct: 114 RTINSIVDANKVFG---LKSFTIISQEFHNERAIYQAEHLGLDVE-----NIQAYNAEMP 165
Query: 216 LSANFYLTELALKEYIGILIAYY 238
+ +LT ++EY + +
Sbjct: 166 KARRAFLTT--IREYFARVKLFI 186
>gi|194468048|ref|ZP_03074034.1| protein of unknown function DUF218 [Lactobacillus reuteri 100-23]
gi|194452901|gb|EDX41799.1| protein of unknown function DUF218 [Lactobacillus reuteri 100-23]
Length = 271
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 96/227 (42%), Gaps = 28/227 (12%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ L +++ L+ + I ++L + R P +D ++
Sbjct: 55 IFAFLLKNLPVQSVSWLSALVVATIDVLGTFNLILFCVFSCCTRLRKCPATVQD---FLV 111
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG P + +R+ + + +C + II+SGG QK +E+
Sbjct: 112 LGAAVKHGQVPPVL--------ATRLDKAI----NCWKTHQSAKIIVSGGIVQKAKESEA 159
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L+ G+ I E ++L+T+QN F+S +IK + +++V+S +H+ R++ Y
Sbjct: 160 EVMAAYLIAHGIPARKIIRENKALNTWQNLAFASQLIKPQ--ETVVVVTSDFHVLRARAY 217
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G+N S + PL+ +++Y+GI+ ++
Sbjct: 218 ARKMGLNWSFISSK---TPWRYCPLT--------FIRDYLGIIRDHW 253
>gi|110635418|ref|YP_675626.1| hypothetical protein Meso_3089 [Mesorhizobium sp. BNC1]
gi|110286402|gb|ABG64461.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 218
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 38/229 (16%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ +R + G+GI +++ L +P + IV+L
Sbjct: 5 RRMWVGVRSAAATIFLFFVLYVAGFGIFADHVVR---------LRAPAELNPADGIVVLT 55
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G SRI M L K+ K + + + L +
Sbjct: 56 GG------------------QSRIDTGMDLLKAGKAKRLLISGVNPVARV--DDLRLATG 95
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L V+ D +L+T NAQ S+ + +II+V++ YH+ RS L +
Sbjct: 96 GDRALFNCCVDIDR-----AALNTVGNAQESAKWVSANTYGSIIVVTNNYHMPRSLLEMR 150
Query: 194 HF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + +N +N + L EY + A RG
Sbjct: 151 RILPNADLQPYPV--VNTPLDDGAWISNPDALRVLLIEYTKYIAALARG 197
>gi|54025401|ref|YP_119643.1| hypothetical protein nfa34310 [Nocardia farcinica IFM 10152]
gi|54016909|dbj|BAD58279.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 315
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 12/147 (8%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P P IV+LG G + +R+ +
Sbjct: 145 PNPLPALVGPQTGIVVLGYGLLPD-------GSLRPELVNRLTAAWIQAIASPFSP---- 193
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++ G ++G+ E+ N L+ G+ I +E ++ T QNA FS+ +++++ +
Sbjct: 194 -VVVTGGNPQNGITEAEAMRNWLVGRGLPAARIHVENRAGSTVQNALFSTRLLRDIGASS 252
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKAS 202
++V+S H++R+ F GI +
Sbjct: 253 AVVVTSPNHIRRAVADFIVAGIPVVGA 279
>gi|172057015|ref|YP_001813475.1| hypothetical protein Exig_0978 [Exiguobacterium sibiricum 255-15]
gi|171989536|gb|ACB60458.1| protein of unknown function DUF218 [Exiguobacterium sibiricum
255-15]
Length = 195
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 24/186 (12%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ P +++LG G PS +RI R K
Sbjct: 33 FVAKGERPLANGKHPYVIVLGAGVKGE--------TPSLILSNRIEAAARYGKQFP---- 80
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
T I+SGG ++E+ ++++G+ + + LE QS T +N FS ++
Sbjct: 81 DTTFILSGGQGDGEAISEAEAMRRGMIQAGISEERLLLEDQSTSTTENLTFSKRLL-PAS 139
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ +V+S +HL R++ + T A + PLS ++E +
Sbjct: 140 ENRVSIVTSDFHLYRARKEAAQMNLKTDAIPAA--------TPLSGVL---RYGMRERVA 188
Query: 233 ILIAYY 238
I++ Y+
Sbjct: 189 IVVKYF 194
>gi|329726589|gb|EGG63052.1| hypothetical protein SEVCU144_2221 [Staphylococcus epidermidis
VCU144]
Length = 318
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 79/185 (42%), Gaps = 16/185 (8%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ L + I + I + + S+ + Q+ K +I++LG G
Sbjct: 106 PLIIINSLALWAATIAFSTIYSFIGYL---SWSTAFENHQYYKHVKLIMVLGAGIFSE-- 160
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +R+ + + +Y S II+SGG ++E++ L+
Sbjct: 161 ------EVTTLLAARLDKALSVYHSQ---RTKPIIIVSGGQGPDEPISEALAMKRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINT 199
V + I +E QS +T N +S S+I +M +++ V+S +H+ R+ + + ++
Sbjct: 212 NVPENHIFMENQSTNTRTNFLYSKSIIHSMMPTSSHMLCVTSQFHVLRALKFAKKAHLSF 271
Query: 200 KASCS 204
S
Sbjct: 272 DGIGS 276
>gi|301021896|ref|ZP_07185857.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300397812|gb|EFJ81350.1| conserved hypothetical protein [Escherichia coli MS 69-1]
Length = 191
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 31 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 85
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 86 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 142
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 143 KHGFYTQ----------LREKLARVSA 159
>gi|15805246|ref|NP_293934.1| hypothetical protein DR_0210 [Deinococcus radiodurans R1]
gi|6457880|gb|AAF09796.1|AE001883_2 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 278
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 10/182 (5%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+LG G + S +R+ +RL+++ T+
Sbjct: 101 QPPVKADAIVVLGGGVNCGAA------QLESSSVARLLGGLRLWQAGYAP--VITVSEQS 152
Query: 121 GDPQKHGLAESIVYNNKLLE--SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G H + V +L+ G ++ T AQ S + + + ++L
Sbjct: 153 GLIGPHNCPKMSVLERELVRELYGAGGPEVLTLPHVTTTRDEAQRVSVLARERGWRRVLL 212
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S H +R+ F +G+ + + S+ S + L E + + +
Sbjct: 213 VTSPSHSRRAAALFAGYGVPVVSVPTFESRYDQSLQTPSDRLFALRTLLYEGLSRVKSAL 272
Query: 239 RG 240
G
Sbjct: 273 GG 274
>gi|306816561|ref|ZP_07450693.1| putative thioredoxin-like protein [Escherichia coli NC101]
gi|305850126|gb|EFM50585.1| putative thioredoxin-like protein [Escherichia coli NC101]
Length = 230
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 63/207 (30%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASQQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + ++ + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKAIFCDYAGFSTLDSVVRANKVFSENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN + +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGLY 186
>gi|294668207|ref|ZP_06733314.1| putative periplasmic protein [Neisseria elongata subsp. glycolytica
ATCC 29315]
gi|291309915|gb|EFE51158.1| putative periplasmic protein [Neisseria elongata subsp. glycolytica
ATCC 29315]
Length = 194
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 70/186 (37%), Gaps = 19/186 (10%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y+ + +G+ V+LG A PS RI + LY+S K
Sbjct: 13 YRSGAAALPQDYNGDAAVVLGAA--------AWDSRPSPVFRERINHAIVLYQSGKVR-- 62
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ +GG + ++E+ V + GV DI +E S T++N ++
Sbjct: 63 --KLAFTGGAIKPGFMSEAEVGMRYAVRQGVPVHDILIEKTSRTTYENLYNIRPLLNEQG 120
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+N ++VS HL R+ + + G+ + S + Y + + L+E
Sbjct: 121 LQNNVIVSDPLHLARAGVMAEDLGMEAELSAT--PTTRY-----TDRADKIKFWLRETFL 173
Query: 233 ILIAYY 238
+ Y
Sbjct: 174 LAGYYI 179
>gi|2196513|gb|AAB61159.1| putative membrane protein [Staphylococcus epidermidis]
Length = 330
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/233 (20%), Positives = 91/233 (39%), Gaps = 31/233 (13%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMS--CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
WI + + +S+ F+ + LF++ I +L +
Sbjct: 103 WIIVTSPLSFFINKSLAAYIFVIHIFIVSLFTYFFSLFISCFILSLFYSR-------RKI 155
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I++LG+G P ++ SRI + S K ++SGG
Sbjct: 156 DMSISYIIVLGSGLIEDKVPPLLQ--------SRIDIGKNFWDSKKDKH--TKFLLSGGQ 205
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ++ES L+ GV + I E +S T++N +FS S+I II+ S+
Sbjct: 206 GKDERISESQAMKKYLIAQGVNENRIICENKSQSTYENLKFSKSLISKN--ATIIICSNN 263
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
YH+ R+ + + +YS+ + N++ T ++E + IL
Sbjct: 264 YHILRAVFIAKKLKY----------SHFYSLGSKTKNYFFTNAFIRELVAILK 306
>gi|320533701|ref|ZP_08034320.1| hypothetical protein HMPREF9057_02210 [Actinomyces sp. oral taxon
171 str. F0337]
gi|320134096|gb|EFW26425.1| hypothetical protein HMPREF9057_02210 [Actinomyces sp. oral taxon
171 str. F0337]
Length = 265
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 55/176 (31%), Gaps = 16/176 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + + + ++ G I + + ++LG
Sbjct: 40 RRLLRFSLAAMGVVTLLAAGASIWA-WTVSAGHIEVAGEDSGDGEAVRAPVAIVLGAAVH 98
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+PS R+ LY S + + I+ GD ++ G E V
Sbjct: 99 AD-------GQPSPWLAHRLDVAADLYTSGRVEA-----ILVSGDNRRAGYDEPTVMRRY 146
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
LL G+ + ++ DT+ + + + +LV+ +H R+ +
Sbjct: 147 LLSQGIPDQAVAVDYAGFDTYDTCVRARRVFG---IERALLVTQDFHEPRAVAICR 199
>gi|42519856|ref|NP_965786.1| hypothetical protein LJ1807 [Lactobacillus johnsonii NCC 533]
gi|41584146|gb|AAS09752.1| hypothetical protein LJ_1807 [Lactobacillus johnsonii NCC 533]
Length = 373
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 88/245 (35%), Gaps = 34/245 (13%)
Query: 1 MLLSWIFLIVSYWH------LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
+L I L + + + + + L +F ++ LL + +
Sbjct: 119 LLTLIIGLFLVGIWTLNRLGVFHRLPDWLHSLVAGATLIAFYLLFVMYNFLLNLVLYQIT 178
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMH 113
+ + +++LG G + + +RI + +
Sbjct: 179 P------RRYKQDYLIVLGAGLIDGKKVSRL-------LGARIDRAIAFSNKQYDKGHKR 225
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + L+E+ + ++ G + + I LE +S +T+QN +S + + G
Sbjct: 226 PKLIMSGGQGKDEDLSEAAAMKDYAVKHGYDPNLILLEDKSTNTYQNMLYSKKVATSDWG 285
Query: 174 KNII---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
++ YHL R+ LY + + + + ++L ++E+
Sbjct: 286 NPNFKAKFFTNNYHLFRAGLYAKMAHLKANGVGA-----------TTRFYFLPNATIREF 334
Query: 231 IGILI 235
G+ I
Sbjct: 335 AGVFI 339
>gi|145300590|ref|YP_001143431.1| SanA protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142853362|gb|ABO91683.1| SanA protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 299
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 50/160 (31%), Gaps = 18/160 (11%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ + I + RI LY + K I+ GD E
Sbjct: 50 ALVLGTSKYLIGGSSNHYFKYRIKAAAELYNNGKVDY-----ILVSGDNATVQYNEPRQM 104
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+++G+ I + T + + + + +VS A+H +R+ +H
Sbjct: 105 RRALIQAGIPAKVIYSDYAGFRTLDSIVRAKEVFGQ---AHFTVVSQAFHNERAIFIARH 161
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
FGI + + + + ++E L
Sbjct: 162 FGIEAVGFNAKDPS----------AYQGIKTRVREVFARL 191
>gi|323178792|gb|EFZ64368.1| sanA [Escherichia coli 1180]
Length = 191
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 31 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 85
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 86 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 142
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 143 KHGFYTQ----------LREKLARVSA 159
>gi|260662077|ref|ZP_05862973.1| conserved hypothetical protein [Lactobacillus fermentum 28-3-CHN]
gi|260553460|gb|EEX26352.1| conserved hypothetical protein [Lactobacillus fermentum 28-3-CHN]
Length = 308
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 76/202 (37%), Gaps = 17/202 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + + + + S ++ +G + ++ +L + L
Sbjct: 84 FFLVGGFLVMVFAPLFPVLWLLWRSVLIVKLMLAIYGYVAVLIDAYLLATVINALPLTIK 143
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
I++LG G P +R R+ + LY+ + +I+SGG
Sbjct: 144 PTK---ILILGAGLIKGGVGPVLR--------RRLLGGLALYQCFPK----AELIMSGGQ 188
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
E++ + + GV I+LET S +T N + I G ++LV+S
Sbjct: 189 GDDEPEPEAVAMHRFARQKGVPESAIRLETNSTNTATNLSEAKRFI--NSGDRVVLVTSD 246
Query: 183 YHLKRSQLYFQHFGINTKASCS 204
YHL RS LY + G+N +
Sbjct: 247 YHLLRSLLYARRQGVNCQGLAV 268
>gi|312870586|ref|ZP_07730701.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
gi|311093901|gb|EFQ52230.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
Length = 280
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 32/243 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M L+ + + W L + K LL +++ L R P
Sbjct: 47 MSLNMLVCLPGLWSLPLARLPK--LGQQLWLLVITTDSLATAGLIMMGLSVLLLRVWPHP 104
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G T P + +R+ R +K + +I+SG
Sbjct: 105 RA---TDYLVVLGAGLTKGQVPPVL--------AARLDSAYRFWKVHPETV----VIVSG 149
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG----KNI 176
GD + ++ + L GV I LE+Q+ +T+QN S +I +
Sbjct: 150 GDVHGDQVTQARAMADYLQRLGVVATKILLESQARNTWQNLVNSRKLIAQHWHREGKPRV 209
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V+S++H+ R+ LY G+N + + +PL +++Y+GI+
Sbjct: 210 TVVTSSFHVPRAMLYTHRLGLNWHFLSA---PTPWPYLPL--------NLVRDYLGIIRD 258
Query: 237 YYR 239
+ R
Sbjct: 259 HRR 261
>gi|168797681|ref|ZP_02822688.1| putative SanA protein [Escherichia coli O157:H7 str. EC508]
gi|189379690|gb|EDU98106.1| putative SanA protein [Escherichia coli O157:H7 str. EC508]
gi|209759082|gb|ACI77853.1| hypothetical protein ECs3968 [Escherichia coli]
gi|326337790|gb|EGD61624.1| SanA protein [Escherichia coli O157:H7 str. 1125]
Length = 230
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 59/197 (29%), Gaps = 24/197 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + ++ + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRANKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCS 204
+ + +GI+ +
Sbjct: 160 AIWLAKQYGIDAIGFNA 176
>gi|153010699|ref|YP_001371913.1| hypothetical protein Oant_3378 [Ochrobactrum anthropi ATCC 49188]
gi|151562587|gb|ABS16084.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 206
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 20/169 (11%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ + P R E RL+K + ++ GD +
Sbjct: 27 LQDDGGRADVIVVPGGDGPPRAAEAARLWKEGRSP---VILVTGDGDCLSN--------K 75
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ GV I +E QS T+QNA+FS+ +++ +Q ++ ++V++ YH +R+ F+
Sbjct: 76 RIMVRKGVTPSAIFVECQSGSTWQNARFSAPLMREIQARSALIVTNWYHSRRAIASFRAA 135
Query: 196 ----GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ D + P EL +KEY+ + G
Sbjct: 136 CPQMRFISSPIGGDDGRPGFPTTPT-----DMELVVKEYVKLGWYLISG 179
>gi|254436861|ref|ZP_05050355.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198252307|gb|EDY76621.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 221
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 85/228 (37%), Gaps = 27/228 (11%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
LL +S+ ++F + + + L +++ P + + + IV LG
Sbjct: 2 LLVRSVGRLFKFAILAFVLMTLSI----------LAWTFMWPQPELRALQPADAIVCLGG 51
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G S + +R+ ++L+++ I+ SGG + +G +
Sbjct: 52 GMNAN-------GALSAPTLTRVERCVQLFEAGLAPV----IVFSGGIARPNGPSAGRQM 100
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ G+ ++ I E + T QNA FS +I N + II+V+ A+HL RS F+
Sbjct: 101 GRIAMTLGLPQNAIVQEGLAQSTLQNALFSLPLIPNA--ERIIIVTEAFHLPRSWASFRW 158
Query: 195 FGINTKASCSDYLNAYYSIIPLSANF---YLTELALKEYIGILIAYYR 239
++ S + ++E + I R
Sbjct: 159 ARWE-LGHPANSFTLVMSEDVRRDPLTGDVRWNIIVRESLAIWFNAVR 205
>gi|15803627|ref|NP_289660.1| hypothetical protein Z4439 [Escherichia coli O157:H7 EDL933]
gi|15833222|ref|NP_311995.1| hypothetical protein ECs3968 [Escherichia coli O157:H7 str. Sakai]
gi|168749322|ref|ZP_02774344.1| putative SanA protein [Escherichia coli O157:H7 str. EC4113]
gi|168754061|ref|ZP_02779068.1| putative SanA protein [Escherichia coli O157:H7 str. EC4401]
gi|168762043|ref|ZP_02787050.1| putative SanA protein [Escherichia coli O157:H7 str. EC4501]
gi|168769498|ref|ZP_02794505.1| putative SanA protein [Escherichia coli O157:H7 str. EC4486]
gi|168773253|ref|ZP_02798260.1| putative SanA protein [Escherichia coli O157:H7 str. EC4196]
gi|168781224|ref|ZP_02806231.1| putative SanA protein [Escherichia coli O157:H7 str. EC4076]
gi|168785964|ref|ZP_02810971.1| putative SanA protein [Escherichia coli O157:H7 str. EC869]
gi|195937232|ref|ZP_03082614.1| hypothetical protein EscherichcoliO157_12386 [Escherichia coli
O157:H7 str. EC4024]
gi|208808971|ref|ZP_03251308.1| putative SanA protein [Escherichia coli O157:H7 str. EC4206]
gi|208812247|ref|ZP_03253576.1| putative SanA protein [Escherichia coli O157:H7 str. EC4045]
gi|208821014|ref|ZP_03261334.1| putative SanA protein [Escherichia coli O157:H7 str. EC4042]
gi|209400696|ref|YP_002272559.1| putative SanA protein [Escherichia coli O157:H7 str. EC4115]
gi|217327782|ref|ZP_03443865.1| putative SanA protein [Escherichia coli O157:H7 str. TW14588]
gi|254795037|ref|YP_003079874.1| putative thioredoxin-like protein [Escherichia coli O157:H7 str.
TW14359]
gi|261228098|ref|ZP_05942379.1| predicted thioredoxin-like protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254954|ref|ZP_05947487.1| predicted thioredoxin-like protein [Escherichia coli O157:H7 str.
FRIK966]
gi|12517673|gb|AAG58219.1|AE005538_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13363441|dbj|BAB37391.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187770753|gb|EDU34597.1| putative SanA protein [Escherichia coli O157:H7 str. EC4196]
gi|188016392|gb|EDU54514.1| putative SanA protein [Escherichia coli O157:H7 str. EC4113]
gi|189000998|gb|EDU69984.1| putative SanA protein [Escherichia coli O157:H7 str. EC4076]
gi|189358584|gb|EDU77003.1| putative SanA protein [Escherichia coli O157:H7 str. EC4401]
gi|189361482|gb|EDU79901.1| putative SanA protein [Escherichia coli O157:H7 str. EC4486]
gi|189367600|gb|EDU86016.1| putative SanA protein [Escherichia coli O157:H7 str. EC4501]
gi|189373918|gb|EDU92334.1| putative SanA protein [Escherichia coli O157:H7 str. EC869]
gi|208728772|gb|EDZ78373.1| putative SanA protein [Escherichia coli O157:H7 str. EC4206]
gi|208733524|gb|EDZ82211.1| putative SanA protein [Escherichia coli O157:H7 str. EC4045]
gi|208741137|gb|EDZ88819.1| putative SanA protein [Escherichia coli O157:H7 str. EC4042]
gi|209162096|gb|ACI39529.1| putative SanA protein [Escherichia coli O157:H7 str. EC4115]
gi|209759080|gb|ACI77852.1| hypothetical protein ECs3968 [Escherichia coli]
gi|209759086|gb|ACI77855.1| hypothetical protein ECs3968 [Escherichia coli]
gi|217320149|gb|EEC28574.1| putative SanA protein [Escherichia coli O157:H7 str. TW14588]
gi|254594437|gb|ACT73798.1| predicted thioredoxin-like protein [Escherichia coli O157:H7 str.
TW14359]
gi|320189438|gb|EFW64097.1| SanA protein [Escherichia coli O157:H7 str. EC1212]
gi|320640159|gb|EFX09731.1| putative thioredoxin-like protein [Escherichia coli O157:H7 str.
G5101]
gi|326347355|gb|EGD71080.1| SanA protein [Escherichia coli O157:H7 str. 1044]
Length = 230
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 59/197 (29%), Gaps = 24/197 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + ++ + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRANKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCS 204
+ + +GI+ +
Sbjct: 160 AIWLAKQYGIDAIGFNA 176
>gi|328948744|ref|YP_004366081.1| hypothetical protein Tresu_1898 [Treponema succinifaciens DSM 2489]
gi|328449068|gb|AEB14784.1| protein of unknown function DUF218 [Treponema succinifaciens DSM
2489]
Length = 273
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 81/225 (36%), Gaps = 23/225 (10%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
W+++ V + L RK+ + C + + + + + + L +
Sbjct: 38 VWLWIAVFFVLLFVLERRKVLKIICSRISKRIKIILIFLFFAGVFISGLNLFFICNPRLS 97
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K++ +++LG G T + +R+ +K+ ++++G
Sbjct: 98 DGKENVRYVIVLGGGITKDAK-------LTDSVKNRVRVASEYFKAHSA----ALVVVTG 146
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G + ES V L G++ + I E ++ DT QN FS+ + G ++
Sbjct: 147 GKGKFSPCPESDVLKPVLASYGIDENRILAENKAKDTIQNFMFSAKLFAEYDGISMEEVL 206
Query: 178 -----LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+V+S +H+ R++ G + ++
Sbjct: 207 ASPVAVVTSDFHIARAERLASRMGFSDV-YGVASKTPPLFVLNSY 250
>gi|291284464|ref|YP_003501282.1| putative SanA protein [Escherichia coli O55:H7 str. CB9615]
gi|209759078|gb|ACI77851.1| hypothetical protein ECs3968 [Escherichia coli]
gi|209759084|gb|ACI77854.1| hypothetical protein ECs3968 [Escherichia coli]
gi|290764337|gb|ADD58298.1| Putative SanA protein [Escherichia coli O55:H7 str. CB9615]
gi|320645456|gb|EFX14465.1| putative SanA protein [Escherichia coli O157:H- str. 493-89]
gi|320650767|gb|EFX19224.1| putative SanA protein [Escherichia coli O157:H- str. H 2687]
gi|320656146|gb|EFX24058.1| putative SanA protein [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320666987|gb|EFX33963.1| putative SanA protein [Escherichia coli O157:H7 str. LSU-61]
Length = 230
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 59/197 (29%), Gaps = 24/197 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + ++ + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRANKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCS 204
+ + +GI+ +
Sbjct: 160 AIWLAKQYGIDAIGFNA 176
>gi|90579756|ref|ZP_01235565.1| Putative SanA protein [Vibrio angustum S14]
gi|90439330|gb|EAS64512.1| Putative SanA protein [Vibrio angustum S14]
Length = 248
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 63/213 (29%), Gaps = 27/213 (12%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
++ F+ ++ + + R ++ ++LG I T+
Sbjct: 6 LIRISAVICILFVSTLLLFDRWVSA--RTSDRIYHDISAVPKHSVGLVLGTSKYIAKTLN 63
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
RI + L+K K + GD E LL++GV
Sbjct: 64 PYYEY-------RITAALDLFKQGKIDYFLLS-----GDNAHRSYNEPWTMKRDLLKAGV 111
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
D I L+ T + + + + +++ +H +R+ + I
Sbjct: 112 PDDKIVLDYAGFRTLDSIVRAKEVFETDNFT---IITQQFHCERALFIADSYKIKATCLA 168
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
N ++ ++E + + A
Sbjct: 169 VHEPN----------GTAQLKIRIREVLARVKA 191
>gi|153803842|ref|ZP_01958428.1| integral membrane protein [Vibrio cholerae MZO-3]
gi|124120623|gb|EAY39366.1| integral membrane protein [Vibrio cholerae MZO-3]
Length = 94
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKE 229
++LV+SA H+KR+ F+ G+ + ++YL + IP S TE E
Sbjct: 1 MVLVTSASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHE 60
Query: 230 YIGILIAYYR 239
+G++ R
Sbjct: 61 TLGLMWQTLR 70
>gi|326774031|ref|ZP_08233313.1| hypothetical protein HMPREF0059_02437 [Actinomyces viscosus C505]
gi|326636170|gb|EGE37074.1| hypothetical protein HMPREF0059_02437 [Actinomyces viscosus C505]
Length = 227
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 18/178 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKH-LQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+S+ +I ++ G I + ++ + +RP + ++LG
Sbjct: 2 RSLVRISAAVMGVMALLAAGASIWAWTISAGHIETAGERPGD--GEAARAPVAIVLGAAV 59
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+PS R+ LY S + + I+ GD ++ G E V
Sbjct: 60 DAD-------GQPSPWLAHRLDTAAELYTSGRVEA-----ILVSGDNRRAGYDEPTVMRR 107
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL G+ I ++ DT+ + + + +LV+ +H R+ +
Sbjct: 108 YLLSQGIPDQAIAVDYAGFDTYDTCVRARRIFG---IERALLVTQDFHEPRAVAICRA 162
>gi|291003905|ref|ZP_06561878.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 189
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 18/175 (10%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII---VLLGNGTTIIPTIPAIRIEPS 90
+G + +L LQ++ R + +D ++LG G PS
Sbjct: 1 MALGGFALAAFVLLPLQWALARSAGRIRTAEDVPATEFGLVLGAGVRYD-------GRPS 53
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ + L+++ + +I G P G +E +V + L+ GV +D+ L
Sbjct: 54 RILQGRLNVALALHRAGRVRR-----LIVSGSPHSRGYSEPVVMRDYLVARGVPPEDVLL 108
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ +DT +A+ ++ +V++ +HL+RS F+ GI+T D
Sbjct: 109 DESGVDTCSSARAAARTFGLRAIT---VVTTNFHLRRSVALFRRAGIDTYGVGHD 160
>gi|110806968|ref|YP_690488.1| hypothetical protein SFV_3127 [Shigella flexneri 5 str. 8401]
gi|110616516|gb|ABF05183.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|332998695|gb|EGK18291.1| hypothetical protein SFVA6_3977 [Shigella flexneri VA-6]
gi|332999851|gb|EGK19435.1| hypothetical protein SFK272_3936 [Shigella flexneri K-272]
gi|333000191|gb|EGK19774.1| hypothetical protein SFK218_4113 [Shigella flexneri K-218]
gi|333015721|gb|EGK35060.1| hypothetical protein SFK227_3624 [Shigella flexneri K-227]
Length = 230
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATIFIADRVMVNASKQLTWGDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFY 186
>gi|110643330|ref|YP_671060.1| hypothetical protein ECP_3177 [Escherichia coli 536]
gi|110344922|gb|ABG71159.1| hypothetical protein YgjQ [Escherichia coli 536]
Length = 227
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 69/225 (30%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ ++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATLFIADRVMVNASKQLTWSDVNVVPARNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + ++ + ++S +H +R+
Sbjct: 104 SGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRANKVFSENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + + L+E + + A
Sbjct: 161 AKQYGIDAIGFNAPDLNMKHGLYTQ----------LREKLARVSA 195
>gi|331648889|ref|ZP_08349977.1| conserved hypothetical protein [Escherichia coli M605]
gi|330909152|gb|EGH37666.1| SanA protein [Escherichia coli AA86]
gi|331042636|gb|EGI14778.1| conserved hypothetical protein [Escherichia coli M605]
Length = 230
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 70/227 (30%), Gaps = 33/227 (14%)
Query: 11 SYWHLLCQS-IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ HLL + + +LL I ++ + ++ ++ ++
Sbjct: 4 VFAHLLRRVCFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLL 63
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
+ G + RI LY + K ++ GD +
Sbjct: 64 LGARPG--------------NRYFTRRIDSAAELYHAGKVKW-----LLVSGDNGRKNYD 104
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ L+ GV I + T + ++ + ++S +H +R+
Sbjct: 105 EASGMQQALIAKGVPAKAIFCDYAGFSTLDSVVRANKVFSENHIT---IISQEFHNQRAI 161
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + + L+E + + A
Sbjct: 162 WLAKQYGIDAIGFNAPDLNMKHGLYTQ----------LREKLARVSA 198
>gi|300931974|ref|ZP_07147271.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300460397|gb|EFK23890.1| conserved hypothetical protein [Escherichia coli MS 187-1]
Length = 230
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 61/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL +I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATILIADRVMVNASKQLTWNDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ V I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKSVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFY 186
>gi|160878990|ref|YP_001557958.1| hypothetical protein Cphy_0832 [Clostridium phytofermentans ISDg]
gi|160427656|gb|ABX41219.1| protein of unknown function DUF218 [Clostridium phytofermentans
ISDg]
Length = 251
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 82/260 (31%), Gaps = 47/260 (18%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKH-------------- 48
+S + ++ + L + F L S + T L+K+
Sbjct: 11 VSVLSILYFFIVLFYSGPKTSFLWFWIALALSLFSASFVLTYLMKYPSTFHNSLRLVIQY 70
Query: 49 ----------LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
L + + + +++LG PS +RI
Sbjct: 71 SVWIGLSIFLLAEGFLVAKSLQTPVPNADYVIILGAQVRGR--------TPSLTLNARIN 122
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ I SGG + E+ L+ GV+ + I LE S +T
Sbjct: 123 TAADYLLKNP----NTKAICSGGQGDGEDVTEAYAIKRGLIARGVKEERILLEEHSTNTV 178
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+N FS S I + ++++V+S +H R+ G + S +
Sbjct: 179 ENLTFSQSFIDD-PNSSVVVVTSNFHTYRASRIAMKLGYKNLSLSSAHEFL--------- 228
Query: 219 NFYLTELALKEYIGILIAYY 238
F + ++E+ ++ +
Sbjct: 229 -FTTPQYYVREFFALVKDWI 247
>gi|194439812|ref|ZP_03071878.1| putative SanA protein [Escherichia coli 101-1]
gi|194421260|gb|EDX37281.1| putative SanA protein [Escherichia coli 101-1]
gi|323961045|gb|EGB56661.1| hypothetical protein ERGG_02513 [Escherichia coli H489]
gi|323970147|gb|EGB65420.1| hypothetical protein ERHG_03763 [Escherichia coli TA007]
Length = 230
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 67/229 (29%), Gaps = 34/229 (14%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL +I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATILIADRVMVNASKQLTWNDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ V I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKSVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + +GI+ + LN + L+E + + A
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 198
>gi|16130981|ref|NP_417557.1| conserved protein, SanA family, DUF218 superfamily [Escherichia
coli str. K-12 substr. MG1655]
gi|89109855|ref|AP_003635.1| predicted thioredoxin-like [Escherichia coli str. K-12 substr.
W3110]
gi|170082628|ref|YP_001731948.1| thioredoxin-like protein [Escherichia coli str. K-12 substr. DH10B]
gi|188493858|ref|ZP_03001128.1| putative SanA protein [Escherichia coli 53638]
gi|238902196|ref|YP_002927992.1| putative thioredoxin-like protein [Escherichia coli BW2952]
gi|253772079|ref|YP_003034910.1| hypothetical protein ECBD_0656 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254038256|ref|ZP_04872314.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|254163032|ref|YP_003046140.1| putative thioredoxin-like protein [Escherichia coli B str. REL606]
gi|256024335|ref|ZP_05438200.1| predicted thioredoxin-like protein [Escherichia sp. 4_1_40B]
gi|297518029|ref|ZP_06936415.1| predicted thioredoxin-like protein [Escherichia coli OP50]
gi|300950697|ref|ZP_07164588.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300958477|ref|ZP_07170615.1| hypothetical protein HMPREF9547_04190 [Escherichia coli MS 175-1]
gi|301644788|ref|ZP_07244763.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|307139773|ref|ZP_07499129.1| predicted thioredoxin-like protein [Escherichia coli H736]
gi|331643784|ref|ZP_08344915.1| conserved hypothetical protein [Escherichia coli H736]
gi|1176123|sp|P42598|YGJQ_ECOLI RecName: Full=Uncharacterized protein ygjQ
gi|606024|gb|AAA57887.1| ORF_o230 [Escherichia coli str. K-12 substr. MG1655]
gi|1789468|gb|AAC76121.1| conserved protein, SanA family, DUF218 superfamily [Escherichia
coli str. K-12 substr. MG1655]
gi|85675886|dbj|BAE77136.1| predicted thioredoxin-like [Escherichia coli str. K12 substr.
W3110]
gi|169890463|gb|ACB04170.1| predicted thioredoxin-like protein [Escherichia coli str. K-12
substr. DH10B]
gi|188489057|gb|EDU64160.1| putative SanA protein [Escherichia coli 53638]
gi|226839880|gb|EEH71901.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|238863133|gb|ACR65131.1| predicted thioredoxin-like protein [Escherichia coli BW2952]
gi|242378634|emb|CAQ33422.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253323123|gb|ACT27725.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974933|gb|ACT40604.1| predicted thioredoxin-like protein [Escherichia coli B str. REL606]
gi|253979089|gb|ACT44759.1| predicted thioredoxin-like protein [Escherichia coli BL21(DE3)]
gi|260447880|gb|ACX38302.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|300314873|gb|EFJ64657.1| hypothetical protein HMPREF9547_04190 [Escherichia coli MS 175-1]
gi|300449993|gb|EFK13613.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|301076942|gb|EFK91748.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|309703516|emb|CBJ02856.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
gi|315137678|dbj|BAJ44837.1| putative thioredoxin-like protein [Escherichia coli DH1]
gi|323935914|gb|EGB32209.1| hypothetical protein ERCG_02677 [Escherichia coli E1520]
gi|331037255|gb|EGI09479.1| conserved hypothetical protein [Escherichia coli H736]
gi|332345042|gb|AEE58376.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 230
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 62/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL +I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFY 186
>gi|320531184|ref|ZP_08032171.1| integral membrane protein with DUF218 domain protein [Actinomyces
sp. oral taxon 171 str. F0337]
gi|320136601|gb|EFW28562.1| integral membrane protein with DUF218 domain protein [Actinomyces
sp. oral taxon 171 str. F0337]
Length = 355
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 78/217 (35%), Gaps = 23/217 (10%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ + F + LL L + QR + +++V+ G G P +
Sbjct: 129 ALLVAALMFCACAYLGAFLLIFLGQTVVQRIWGGRRTVPHPDVVVVHGAGLINGKVGPLL 188
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ-KHGLAESIVYNNKLLESGVE 144
SRI + ++ + +++ G ++E+ + + G+
Sbjct: 189 --------GSRIAGGIDAWREEEALRPGAPLLVMSGGQGVDEPVSEARAMADYAIARGIP 240
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I LE +S T N + ++ ++LV+S++H R+ + G+ +
Sbjct: 241 PKRILLEDRSTTTRTNISCTRDLLAERGMVDPQVLLVTSSFHAVRTAILASDMGVPWAVA 300
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +A FY+ L+EY+ +L R
Sbjct: 301 PA-----------RTAWFYIVNAWLREYVAVLTYRRR 326
>gi|212712140|ref|ZP_03320268.1| hypothetical protein PROVALCAL_03222 [Providencia alcalifaciens DSM
30120]
gi|212685187|gb|EEB44715.1| hypothetical protein PROVALCAL_03222 [Providencia alcalifaciens DSM
30120]
Length = 234
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/214 (13%), Positives = 60/214 (28%), Gaps = 21/214 (9%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
RK +L I+ + + + ++ ++LG
Sbjct: 2 RKRLLYGLLILAGIAFATVILLDR-WISWESA-PYIYEDVEQLPARDVGMVLGTSRYYAS 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ RI Y S K + + GD H E I L++
Sbjct: 60 GATNLYYTY------RIKGAADAYHSGKVKYLLLS-----GDNGAHNYNEPIAMRKDLIK 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV I L+ T + + + +++ +H +R+ +H GI+ +
Sbjct: 109 AGVPASKIVLDFAGFRTLDSVVRTKKVFDTDNFT---IITQRFHCERALFIAKHKGIDAQ 165
Query: 201 ASCSD-----YLNAYYSIIPLSANFYLTELALKE 229
+ + + +E
Sbjct: 166 CLAVPTPEGMFKVRVREVFARLGALADLYILQRE 199
>gi|319401654|gb|EFV89863.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
Length = 318
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ L + I + I + + S+ + Q+ K +I++LG G
Sbjct: 106 PLIIINSLALWVATIAFSTIYSFIGYL---SWSTAFENHQYHKHVKLIMVLGAGIFSE-- 160
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +R+ + + +Y S II+SGG ++E++ L+
Sbjct: 161 ------EVTTLLAARLDKALSVYHSQ---RTKPIIIVSGGQGPDEPISEALAMKRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINT 199
V + I +E QS +T N +S S+I +M ++ V+S +H+ R+ + + ++
Sbjct: 212 NVPENHIFMENQSTNTRTNFLYSKSIIHSMMPASSQMLCVTSQFHVLRALKFAKKAHLSF 271
Query: 200 KASCS 204
S
Sbjct: 272 DGIGS 276
>gi|56415161|ref|YP_152236.1| hypothetical protein SPA3090 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364091|ref|YP_002143728.1| hypothetical protein SSPA2886 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56129418|gb|AAV78924.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095568|emb|CAR61133.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 230
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 34/227 (14%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ LC R+ ++CF+L+ + + L+ + + ++ +++
Sbjct: 8 FIRRLCF-TRRALTVACFLLVAAAVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLG 65
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD K E
Sbjct: 66 AKPG--------------NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEP 106
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + + ++S A+H +R+
Sbjct: 107 SAMQQALIAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWL 163
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q +GI+ + LN + T L+E + + A
Sbjct: 164 AQQYGIDAIGVNAPDLNKRHG----------TYTRLREKLARVSAVL 200
>gi|218670399|ref|ZP_03520070.1| hypothetical protein RetlG_01442 [Rhizobium etli GR56]
Length = 90
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSA 218
+ + + +L++S +H+ RS F+ GI+ +DY +
Sbjct: 1 TKEFLAGQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPNL 60
Query: 219 NFYLTELALKEYIGILIAYYRG 240
N A++E+ G++ Y G
Sbjct: 61 NAQNMATAIREWYGLVGYYLAG 82
>gi|195977434|ref|YP_002122678.1| hypothetical protein Sez_0289 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974139|gb|ACG61665.1| hypothetical protein Sez_0289 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 342
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 97/258 (37%), Gaps = 51/258 (19%)
Query: 3 LSWIFLIVSYWHLLCQ---SIRKIFFMSCFMLLFS--FIG-------------------- 37
+ +FL + L+ + S R + + +LLF FI
Sbjct: 79 ILLLFLSFNGIRLIKREGLSFRNLLLIGSAVLLFVHPFISRLLLESIGDSKLLRIMYETS 138
Query: 38 -WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
I +L+ + K + I++LG+G P + SR
Sbjct: 139 DLLIFYLLLIVSVYTISSMLNTFYLRKTKEDYIIVLGSGLNGDQVTPLL--------ASR 190
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I + +++Y+ +I+SGG +AE ++ G++ +DI +E QS +
Sbjct: 191 INKGIQVYRKNP----GSKLIMSGGKGADELIAEGEAMCRYAVQQGIKSEDILVENQSRN 246
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T +N FS +I G + LV++ YHL R+ L + + + +
Sbjct: 247 TRENILFSKQLIPA--GASFCLVTNRYHLFRALLLAKELALPCRGYGA-----------K 293
Query: 217 SANFYLTELALKEYIGIL 234
+ ++ ++E +G L
Sbjct: 294 TKLYFSMNAFIREIVGYL 311
>gi|118591370|ref|ZP_01548768.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
gi|118436042|gb|EAV42685.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
Length = 241
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 85/226 (37%), Gaps = 39/226 (17%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
++ F+ + + + G + F+ + + + IV+L G
Sbjct: 43 RKKRFGLRVLFVAVVTALLAGTAGQFAM----FAQKVANARVPATANADAIVVLTGGH-- 96
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+R+ E +RL + + + + + + G ++ + L
Sbjct: 97 ----------------ARVNEAVRLLEEGRANRLLISGVHPGTTREQLAAVTASNMP--L 138
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--G 196
+ V+ D + +L+T NA +++ ++ ++++V+SAYHL R+++
Sbjct: 139 ETNSVDLDRV-----ALNTAGNAVETANWVRKNGFSSLLVVTSAYHLPRAKVELAGALPD 193
Query: 197 INTKASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ A D ++ P + ++EY+ ++A R
Sbjct: 194 VSLIAYPVFSKDLKLDHWYREPATMRL-----LMREYVKYILARLR 234
>gi|156741328|ref|YP_001431457.1| hypothetical protein Rcas_1343 [Roseiflexus castenholzii DSM 13941]
gi|156232656|gb|ABU57439.1| protein of unknown function DUF218 [Roseiflexus castenholzii DSM
13941]
Length = 213
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 69/227 (30%), Gaps = 32/227 (14%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L + I + +L+ + I + L+ + I++LG
Sbjct: 10 RLPTRRIPGYETLVALILVLAIITIPFLA-----------APWLIVDDAVDTADAIIVLG 58
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+R + LY + + T G + + + V
Sbjct: 59 G---------------EAYPPNRTIHALALYHQHRAPVVVFTGGAPPG--RPPETSSAQV 101
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L G+ D L + T+ A ++ +++++V+ YH +R+ F+
Sbjct: 102 ARRLALARGLPPDVALLADGAQSTYDEAVLVRELVAAHGWRSLMIVTDPYHTRRAVRTFR 161
Query: 194 HF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ AS + +L+ P + A E + +
Sbjct: 162 TLIPNAHVTASAAPFLSPCAD--PWRCGARIWRYAASELVKMGFYRL 206
>gi|315617162|gb|EFU97771.1| conserved hypothetical protein [Escherichia coli 3431]
Length = 203
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 43 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 97
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 98 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 154
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 155 KHGFYTQ----------LREKLARVSA 171
>gi|68250208|ref|YP_249320.1| SanA [Haemophilus influenzae 86-028NP]
gi|68058407|gb|AAX88660.1| SanA [Haemophilus influenzae 86-028NP]
Length = 244
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 69/229 (30%), Gaps = 25/229 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + +L + + F + LL++ I+L L + + + +
Sbjct: 16 FFIMFTAMLVKKLSPKFTVLFRALLYAI-----FALIILCLLVDRGVSFYVRDKIFTNID 70
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ + + + +P+ SR+ L + K + + + GD +
Sbjct: 71 ELPFRPCALVLGTSKYTVSGKPNVYYDSRLMAAKSLIEQQKVNYLLLS-----GDNRTLQ 125
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E L + GV + + T + + + + +VS +H +R
Sbjct: 126 YNEPRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVKTFT---IVSQKFHCER 182
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ L Q I+ + ++E + A
Sbjct: 183 ALLIAQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 219
>gi|295112887|emb|CBL31524.1| Uncharacterized conserved protein [Enterococcus sp. 7L76]
Length = 371
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 78/200 (39%), Gaps = 20/200 (10%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ LL + ++ F+L + + L + + +P K + I
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAF---VFYNFLTVSTLYQFNQP------KYTQDYI 221
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGL 128
V+LG+G +P + +RI + ++ YK + I++SGG L
Sbjct: 222 VVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPDELL 274
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHL 185
ES+ L G+ DDI +E S +T +N +FS + G ++ YHL
Sbjct: 275 PESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHL 334
Query: 186 KRSQLYFQHFGINTKASCSD 205
R+ L+ + G+ +
Sbjct: 335 FRAGLFARMAGLKADGIGAK 354
>gi|332086562|gb|EGI91707.1| hypothetical protein SB521682_3686 [Shigella boydii 5216-82]
Length = 171
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 11 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 65
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 66 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 122
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 123 KHGFYTQ----------LREKLARVSA 139
>gi|329668109|gb|AEB94057.1| hypothetical protein LJP_1741 [Lactobacillus johnsonii DPC 6026]
Length = 373
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 89/245 (36%), Gaps = 34/245 (13%)
Query: 1 MLLSWIFLIVSYWH------LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
+L I L + + + + + L +F ++ LL + +
Sbjct: 119 LLTLIIGLFLVGIWTLNRLGIFHRLPDWLHSLVAGATLIAFYLLFVMYNFLLNLVLYQ-- 176
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMH 113
+ + +++LG G + + +RI + +
Sbjct: 177 ----IVPRRYHQDYLIVLGAGLIEGKKVSRL-------LGARIDRAIAFSNKQYDKGHKR 225
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + L+E+ + ++ G + + I LE +S +T+QN +S + N G
Sbjct: 226 PKLIMSGGQGKDEDLSEAAAMKDYAVKHGYDPNLILLEDKSTNTYQNMLYSKKVAVNDWG 285
Query: 174 KNII---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ ++ YHL R+ LY + + + + ++L ++E+
Sbjct: 286 NSNFKAKFFTNNYHLFRAGLYAKMAHLKANGIGA-----------TTRFYFLPNATIREF 334
Query: 231 IGILI 235
G+ I
Sbjct: 335 AGVFI 339
>gi|225024219|ref|ZP_03713411.1| hypothetical protein EIKCOROL_01091 [Eikenella corrodens ATCC
23834]
gi|224943244|gb|EEG24453.1| hypothetical protein EIKCOROL_01091 [Eikenella corrodens ATCC
23834]
Length = 221
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 25/198 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
L + LL Q R I +L+ + L+ + +
Sbjct: 1 MLAIFRGSLLRQVWRGIKLCLLVLLVQAAWCT-----WLVYS--------YSTRTASRRA 47
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG PS RI + LY++ + +I +GG P+
Sbjct: 48 DAAVVLGAAAWGK--------NPSPVFRERINHGITLYRNNRVG----KLIFTGGTPKAG 95
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E+ V GV DI LET S DT QN + + +++ N ++++++S YHL
Sbjct: 96 YMTEAEVARRYARGHGVPNKDILLETTSRDTQQNLENTKALMYNNGLESVVIISDPYHLA 155
Query: 187 RSQLYFQHFGINTKASCS 204
R+ + G++ + +
Sbjct: 156 RAAAVADYVGLDYQTEPT 173
>gi|332753148|gb|EGJ83532.1| hypothetical protein SF434370_3328 [Shigella flexneri 4343-70]
Length = 203
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 43 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 97
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 98 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 154
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 155 KHGFYTQ----------LREKLARVSA 171
>gi|254500805|ref|ZP_05112956.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436876|gb|EEE43555.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 243
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 71/228 (31%), Gaps = 42/228 (18%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ F+ + +F + + + IV+L G
Sbjct: 46 KRRFALRTFLVACVTVFVVGTTIQFANFANR-------VSTATVPVSTQADAIVVLTGG- 97
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
R+ E +RL + + + + + +A
Sbjct: 98 -----------------QERVSEAVRLLEEGHAGRLLISGVHP--GTTRKQIAVVTASAK 138
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF- 195
L E VE D + +L+T NA +++ ++ ++++V+SAYHL R+
Sbjct: 139 PLEEGSVELDRV-----ALNTAGNATETANWVRKNGFDSLLVVTSAYHLPRATAELSGAL 193
Query: 196 -GINTKASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ D + P + L ++EY+ +A R
Sbjct: 194 PDVTLIGYPVFAKDLQLEAWHTKPAT-----IRLLIREYVKYTVARLR 236
>gi|227889206|ref|ZP_04007011.1| integral membrane protein [Lactobacillus johnsonii ATCC 33200]
gi|227850435|gb|EEJ60521.1| integral membrane protein [Lactobacillus johnsonii ATCC 33200]
Length = 373
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 89/244 (36%), Gaps = 33/244 (13%)
Query: 1 MLLSWIFLIVSYWHL-----LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
+ L +V W L + + + L +F ++ LL + +
Sbjct: 120 LTLIIGLFLVGIWTLNRLGVFHRLPDWLHSLVAGATLIAFYLLFVMYNFLLNLVLYQITP 179
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHC 114
+ + +++LG G + + +RI + +
Sbjct: 180 ------RRYKQDYLIVLGAGLIDGKKVSRL-------LGARIDRAIAFSNKQYDKGHKRP 226
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+I+SGG + L+E+ + ++ G + + I LE +S +T+QN +S + + G
Sbjct: 227 KLIMSGGQGKDEDLSEAAAMKDYAVKHGYDSNLILLEDKSTNTYQNMLYSKKVAISDWGN 286
Query: 175 NII---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ ++ YHL R+ LY + + + + ++L ++E+
Sbjct: 287 SKFKAKFFTNNYHLFRAGLYAKMAHLKANGVGA-----------TTRFYFLPNATIREFA 335
Query: 232 GILI 235
G+ I
Sbjct: 336 GVFI 339
>gi|331674630|ref|ZP_08375389.1| conserved hypothetical protein [Escherichia coli TA280]
gi|331068069|gb|EGI39465.1| conserved hypothetical protein [Escherichia coli TA280]
Length = 230
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENYIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFY 186
>gi|300871750|ref|YP_003786623.1| sanA protein [Brachyspira pilosicoli 95/1000]
gi|300689451|gb|ADK32122.1| sanA protein [Brachyspira pilosicoli 95/1000]
Length = 273
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 71/209 (33%), Gaps = 23/209 (11%)
Query: 6 IFLIVS--YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
IFL + + + I + + I + + + K++ S +
Sbjct: 31 IFLKIINYILLAIYSFYQFILEFVIIFVFIALISYFSVSSYSKKYI-------YDSIEEI 83
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ ++LG + + + R+ LY + K I+ GD
Sbjct: 84 PYNDVALVLGTSKYLSDGRINMYFKF------RMDAAYELYTNGK-----VKYILVSGDN 132
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E L++ GV++ I L+ T + ++ + N +VS +
Sbjct: 133 RHRSYNEPRQMRLDLIKLGVDKRHIFLDFAGFRTRDSILRANRVFD---LTNFTIVSQPF 189
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYS 212
H +R+ + IN A +D + Y
Sbjct: 190 HNERAVFIAREKKINAIAYSADNVRKLYR 218
>gi|220921160|ref|YP_002496461.1| hypothetical protein Mnod_1152 [Methylobacterium nodulans ORS 2060]
gi|219945766|gb|ACL56158.1| protein of unknown function DUF218 [Methylobacterium nodulans ORS
2060]
Length = 245
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 78/232 (33%), Gaps = 42/232 (18%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + R++ ++ S + +G+ + L + ++P + IV L
Sbjct: 19 AIRARPWRRLVLTLAALVGASGLAFGVGFLAFVGCLARTERQP------HAPADGIVALT 72
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G RI + + L + + T + + +A
Sbjct: 73 GG------------------AQRIGDAIDLLAAGYGRRLLITGV--NERTSREEIARLNP 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ V+ D ++ +T NA + ++ + + +V+S YH+ R+ L
Sbjct: 113 GQQHLIACCVDLD-----YRARNTIGNAIETRRWMRENGFRTVAVVTSNYHMPRTLLELG 167
Query: 194 HF---GINTKASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H G + + P SA ++ EY+ L+A+ R
Sbjct: 168 HALADGNRVVPHPVVHDGFDPDAWWHHPASARLLVS-----EYVKFLVAWIR 214
>gi|24378805|ref|NP_720760.1| hypothetical protein SMU.302 [Streptococcus mutans UA159]
gi|290581191|ref|YP_003485583.1| hypothetical protein SmuNN2025_1665 [Streptococcus mutans NN2025]
gi|24376679|gb|AAN58066.1|AE014879_3 conserved hypothetical protein; putative membrane protein
[Streptococcus mutans UA159]
gi|254998090|dbj|BAH88691.1| conserved hypothetical protein [Streptococcus mutans NN2025]
Length = 337
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 92/242 (38%), Gaps = 33/242 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLL---FSFIGWGIIPTILLKHLQFSYQRPL 57
M+ S+ +V H + F S + LL F I +L Y
Sbjct: 101 MITSFFLFMVIRIHHSTHLLFNRFIASLYALLSASFLIFSVAFIAFML-------YSILY 153
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
L K + I++ G G + + RI + + ++ K + +I
Sbjct: 154 LIIPKNKHYDYIIIHGAGLLHG-------NQVTPLLKRRIDKALEAFRQSK--NSQVKLI 204
Query: 118 ISGGDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
SGG ++E+ N + + + D + LE QS T++N FS + + K
Sbjct: 205 ASGGLGSGETISEAAAIANYIRKQASDIPNDRLLLEEQSHSTYENLLFSKQLAEKEMKKP 264
Query: 176 II-LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
V++AYH+ R+ +Y + + A + +A +Y+ ++E+I I+
Sbjct: 265 RFLFVTNAYHVFRTSVYARRLHM-----------AGDGLGCSTAAYYIPSAFIREFIAIV 313
Query: 235 IA 236
+
Sbjct: 314 VY 315
>gi|218462839|ref|ZP_03502930.1| hypothetical protein RetlK5_26822 [Rhizobium etli Kim 5]
Length = 236
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 76/232 (32%), Gaps = 48/232 (20%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +R F + F G+ L P + + IV+L G
Sbjct: 28 IRRLLRWGGFGCVLAIALLFGGFLRFAD----------SVTTLKPPVEPKADAIVVLTGG 77
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
Y RI + + L + + + + + + +
Sbjct: 78 ------------------YQRIDQAVELLQKGAGKRLLISGVHPT--TTPAQIRKMTQGS 117
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR--SQLYFQ 193
L V+ + ++DT NA+ +S+ I +++++V++ YH+ R ++L +
Sbjct: 118 ADLFSCCVD-----IGHDAIDTIGNAEETSNWIHAKGYRSVLVVTNNYHMPRTLAELSYV 172
Query: 194 HFGINTKASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
I D + P + + L EY+ +L G R
Sbjct: 173 DPDIEFIPYPVVNSDLKTRNWFTDPNA-----MRVMLAEYLKVL---LAGAR 216
>gi|218459892|ref|ZP_03499983.1| hypothetical protein RetlK5_10494 [Rhizobium etli Kim 5]
Length = 165
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 9/158 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
LS FL+V + L + +F + L+ + +L++ L+ + +P
Sbjct: 14 PLSLAFLLVFFALLAGLRRWRALSLFATAGGALILFVTLYTTAGNLLMQGLEQRFPKPAG 73
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P ++ +++LG IE + + R E +RL + Q + +
Sbjct: 74 DP---ENLQCMIVLGGAFENEVNTARHGIEFNA-AADRFVEALRLAQKFPQSRILISG-- 127
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
G ++ G+ +D + E QS
Sbjct: 128 GDGSLSGIYEGDAAASERFFPLFGIGKDRLIEERQSRT 165
>gi|163753469|ref|ZP_02160593.1| putative transport-related membrane protein [Kordia algicida OT-1]
gi|161327201|gb|EDP98526.1| putative transport-related membrane protein [Kordia algicida OT-1]
Length = 226
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 74/223 (33%), Gaps = 31/223 (13%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ + + +++I F ++ + L ++ + P K +LL
Sbjct: 14 FVAMKKWLKRIGFTFLVFIIGIIACNTYVE---LISNGKTFNKVAEIPSNKVG----LLL 66
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G + + RI T++LYKS K I+ GD E
Sbjct: 67 GTG------KYLKNGKVNLFYSYRINATVKLYKSGK-----IKYILVSGDNGSKTYDEPT 115
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L+ +G+ + I L+ T + S + + ++S +H +R+
Sbjct: 116 TFKEDLIAAGIPENKIILDYAGFRTLDSVVRSKEIFQQENIT---IISQQFHNERAIAIA 172
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
GIN + + ++ ++E + +
Sbjct: 173 NAKGINAVGFNAKNVGGRSGF----------KIKVREVLARVA 205
>gi|284923114|emb|CBG36207.1| conserved hypothetical protein [Escherichia coli 042]
Length = 227
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 67 NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 121
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 122 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 178
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 179 KHGFYTQ----------LREKLARVSA 195
>gi|170018663|ref|YP_001723617.1| hypothetical protein EcolC_0614 [Escherichia coli ATCC 8739]
gi|169753591|gb|ACA76290.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
Length = 227
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 67/225 (29%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ ++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + ++S +H +R+
Sbjct: 104 SGMQQALITKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + L+E + + A
Sbjct: 161 AKQYGIDAIGFNAPDLNMKHVFYTQ----------LREKLARVSA 195
>gi|170682034|ref|YP_001745356.1| putative SanA protein [Escherichia coli SMS-3-5]
gi|170519752|gb|ACB17930.1| putative SanA protein [Escherichia coli SMS-3-5]
Length = 227
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 69/225 (30%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ ++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASQQLTWSDVNAVPARNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDSAAELYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + ++ + ++S +H +R+
Sbjct: 104 SGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRANKVFSENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +GI+ + LN + + L+E + + A
Sbjct: 161 AKQYGIDAIGFNAPDLNMKHGLYTQ----------LREKLARVSA 195
>gi|227515109|ref|ZP_03945158.1| membrane protein [Lactobacillus fermentum ATCC 14931]
gi|227086441|gb|EEI21753.1| membrane protein [Lactobacillus fermentum ATCC 14931]
Length = 308
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 76/202 (37%), Gaps = 17/202 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + + + + S + +G + ++ +L + L
Sbjct: 84 FFLVGGFLVMVFAPLFPVLWLLWRSVLTVKLMLAIYGYVAVLIDAYLLATVINALPLTIK 143
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
I++LG G P +R R+ + LY+ + +I+SGG
Sbjct: 144 PTK---ILILGAGLIKGGVGPVLR--------RRLLGGLALYQRFPK----AELIMSGGQ 188
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
E++ + + GV + I+LET S +T N + I G ++LV+S
Sbjct: 189 GDDEPEPEAVAMHRFARQKGVPKSAIRLETNSTNTATNLSEAKRFI--NSGDRVVLVTSD 246
Query: 183 YHLKRSQLYFQHFGINTKASCS 204
YHL RS LY + G+N +
Sbjct: 247 YHLLRSLLYARRQGVNCQGLAV 268
>gi|85713578|ref|ZP_01044568.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
gi|85699482|gb|EAQ37349.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
Length = 239
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 73/223 (32%), Gaps = 31/223 (13%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + + +F+G G+ L L+ +P+ + + IV+L
Sbjct: 15 GMSARRRGMLLATLVAAAGIAFVGAGVGFVGFLSQLRGVETKPV------NNADGIVVLT 68
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G+ SRI + + L + + + +
Sbjct: 69 GGS------------------SRISDAVELLAGGYGKRLLISGVHPTNGVSDISRSLPDS 110
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
LL V+ D +++T NA + + +++I+V+S YH+ R+ +
Sbjct: 111 QQ--LLTCCVDLDR-----SAVNTRSNASETRRWVDEQGFRSLIVVTSNYHMPRAIVELS 163
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
H N + + P + L L EY+ L A
Sbjct: 164 HAMPNVTLIPFAVIGDKWREEPWWTSGTTLRLLLSEYVKYLAA 206
>gi|304311070|ref|YP_003810668.1| Putative SanA protein [gamma proteobacterium HdN1]
gi|301796803|emb|CBL45015.1| Putative SanA protein [gamma proteobacterium HdN1]
Length = 247
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/215 (12%), Positives = 72/215 (33%), Gaps = 21/215 (9%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ + R F++ F+ + F+ + + + +++V+L
Sbjct: 13 LASIFRIARWGSFVAGFVSIVLFLCDFSVSA-------STQSAIKTQIGEVPEHSVVVVL 65
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G +P+ ++ P +R+ +LY++ K + ++ GD E
Sbjct: 66 GTSWR----LPSGKVNP--YYKARVDAVDQLYRAGKVQA-----VVVSGDNATPQYNEPR 114
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L+ G+ I ++ T + + + + + ++VS + ++R+
Sbjct: 115 KLRKDLIARGIPAGMITMDFAGFRTLDSVVRAREVFR---LDHFVVVSQRFQIERALYIA 171
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+ + + + F L
Sbjct: 172 KAHQIDAIGFVAKDPQTFGWRVRSREVFARFLAVL 206
>gi|330793832|ref|XP_003284986.1| hypothetical protein DICPUDRAFT_148822 [Dictyostelium purpureum]
gi|325085107|gb|EGC38521.1| hypothetical protein DICPUDRAFT_148822 [Dictyostelium purpureum]
Length = 549
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 13/141 (9%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S Q + I++LG P+ R+ + Y + + +I+
Sbjct: 122 SQQPVEYDTAIIVLGYSLHPD-------GMPTQILKERVVLAAQYYAQLQGEGSNIKLIL 174
Query: 119 SGGDPQKHGL------AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
SG +E+ N L + V DI +E S +T +NA+++ +K
Sbjct: 175 SGKSKATSFEEDQGFNSEAEAMNEIALHNDVPARDIMIENNSTNTAENAKYTLEFLKQHN 234
Query: 173 GKNIILVSSAYHLKRSQLYFQ 193
+ + +V+S +H+ RSQ FQ
Sbjct: 235 IQRLFIVTSDFHVLRSQYIFQ 255
>gi|242243837|ref|ZP_04798281.1| membrane protein [Staphylococcus epidermidis W23144]
gi|242232681|gb|EES34993.1| membrane protein [Staphylococcus epidermidis W23144]
Length = 318
Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ L + I + I + + S+ + Q+ K +I++LG G
Sbjct: 106 PLIIINSLALWVATIAFSTIYSFIGYL---SWSTAFENHQYHKHVKLIMVLGAGIFSE-- 160
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +R+ + + +Y S II+SGG ++E++ L+
Sbjct: 161 ------EVTTLLAARLDKALSVYHSQ---RTKPIIIVSGGQGPDEPISEALAMKRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINT 199
V + I +E QS +T N +S S+I +M ++ V+S +H+ R+ + + ++
Sbjct: 212 NVPENYIFMENQSTNTRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRALKFAKKAHLSF 271
Query: 200 KASCS 204
S
Sbjct: 272 DGIGS 276
>gi|329297902|ref|ZP_08255238.1| vancomycin high temperature exclusion protein [Plautia stali
symbiont]
Length = 241
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 59/186 (31%), Gaps = 16/186 (8%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
I K F F+++ + + + + + V+LG
Sbjct: 2 RILKRVFFGLFIIILLVMATALGLDRWIS--WRTAPFIYEDVASLPHRQVGVVLGTA--- 56
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ RI + Y S K + + + GD E + L
Sbjct: 57 ---KYYRTGVINQYYLYRIQGALNAYNSGKVNYLLLS-----GDNALQSYNEPMTMRRAL 108
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+++GV+ DI L+ T + + + I+++ +H +R+ QH GI
Sbjct: 109 IKAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALYIAQHLGIQ 165
Query: 199 TKASCS 204
+
Sbjct: 166 AQCYAV 171
>gi|198242619|ref|YP_002217203.1| SanA protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|197937135|gb|ACH74468.1| SanA protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
Length = 230
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 34/227 (14%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ LC R+ ++CF+L+ + + L+ + + ++ +++
Sbjct: 8 FIRRLCF-TRRALTVACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLG 65
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD K E
Sbjct: 66 AKPG--------------NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEP 106
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + + ++S A+H +R+
Sbjct: 107 SAMQQALIAKGVPEAAIFCDYAGFSTLDSVVRARKVFGERRIT---IISQAFHNQRAIWL 163
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q +GI+ + LN + T L+E + + A
Sbjct: 164 AQQYGIDAIGVNAPDLNKRHG----------TYTRLREKLARVSAVL 200
>gi|332686094|ref|YP_004455868.1| hypothetical protein MPTP_0591 [Melissococcus plutonius ATCC 35311]
gi|332370103|dbj|BAK21059.1| hypothetical protein MPTP_0591 [Melissococcus plutonius ATCC 35311]
Length = 196
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 20/183 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ I+KI + M+ + + + L +++PL S NII++LG
Sbjct: 2 KRIKKIAYCLLGMI------FTYGCFLFICILSNIHEKPLSSSP-----NIILVLGARIY 50
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A P +R+ T+ K+HS II+ GG E+ V
Sbjct: 51 GTEKRKAY---PGSVLKTRLDTTLAYI---KKHSSTTKIIVCGGKGALEPTTEASVMATY 104
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L + G+ R + E +S T +N Q++ ++ + +L++S +HL RS+ + GI
Sbjct: 105 LNKHGIPRQKLIQEKRSTRTKENIQYAMKLVN---LDHALLITSDFHLYRSKWLAKQLGI 161
Query: 198 NTK 200
++
Sbjct: 162 HSI 164
>gi|328469464|gb|EGF40410.1| hypothetical protein VP10329_11286 [Vibrio parahaemolyticus 10329]
Length = 365
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 68/178 (38%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV LG ++ I + R+ T+ + K+ III G
Sbjct: 188 KLDNKGAIVTLGYALNPDGSMHQILV-------ERLETTLAMAKANPDA-----IIILTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+E GV +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLIEKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL +E E +GI R
Sbjct: 296 ASHVRRGQTLFEIASWQTGPQGITFDTVSYPDKPLKDLAKASES---ELLGIYRDALR 350
>gi|281180139|dbj|BAI56469.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 230
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 63/207 (30%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDSAAELYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + ++ + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKAIFCDYAGFSTLDSVVRANKVFSENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN + +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGLY 186
>gi|257125972|ref|YP_003164086.1| hypothetical protein Lebu_1204 [Leptotrichia buccalis C-1013-b]
gi|257049911|gb|ACV39095.1| protein of unknown function DUF218 [Leptotrichia buccalis C-1013-b]
Length = 221
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 31/205 (15%)
Query: 47 KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS 106
+ Y S K + +++LG ++ RI K
Sbjct: 25 YFIIKEYINDRKSVNENKKVDYVIILGARVKGEKPTKSLM--------ERIKAATEYLKK 76
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
+ +I +GG + +AE + +LL++G+ D I LE +S +T +N +FS
Sbjct: 77 NPE----VKVIATGGQGKNENVAEGLAIKRELLKNGISEDRIVLEDKSKNTVENFRFSLE 132
Query: 167 MIKN-------------MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
IKN Q +++V++ YH+ RS+ + G + + Y +
Sbjct: 133 KIKNIENSKNILNNNKKNQKIKVLIVTNDYHVFRSKNIARKVGFDNENY------EIYGL 186
Query: 214 IPLSANFYLTELALKEYIGILIAYY 238
+ + + +E++ + +
Sbjct: 187 PAKTPLISIPKSYFREFLSNVNYFI 211
>gi|312972649|ref|ZP_07786822.1| sanA [Escherichia coli 1827-70]
gi|310332591|gb|EFP99804.1| sanA [Escherichia coli 1827-70]
Length = 207
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 46/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ V I
Sbjct: 47 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKDVPAKVIF 101
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 102 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 158
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 159 KHGFYTQ----------LREKLARVSA 175
>gi|296393440|ref|YP_003658324.1| hypothetical protein Srot_1020 [Segniliparus rotundus DSM 44985]
gi|296180587|gb|ADG97493.1| protein of unknown function DUF218 [Segniliparus rotundus DSM
44985]
Length = 344
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKD-----GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+L +Q PL D IV LG G ++P + R+
Sbjct: 149 DRMLTAIQSQASAPLSEEVPAADSLRGAATTIVTLGAGLRPDGSMPQV-------LLERL 201
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+T+ L + + S II G ++GL E+ + L+ GV+ + E +S T
Sbjct: 202 KKTLDLALADPEAS-----IIVTGGKPQNGLTEADAMADWLVGQGVDPARVHKEDRSAST 256
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ-------HFGINTKASCS 204
QNA S+S++++++ +++V+SA H +R+ + G + + S
Sbjct: 257 VQNALNSASILRSLKPSQLVVVTSANHARRASALLELVAQTALDPGFDLISVAS 310
>gi|227496423|ref|ZP_03926709.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
gi|226834042|gb|EEH66425.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
Length = 363
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 88/252 (34%), Gaps = 36/252 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL I L+ + + + + +++ Q QR +
Sbjct: 104 LLLGIGLVAAPVCAVVLVSLTQAWSIAAAAELFAACLYLGSFLIILLAQTLVQRVWGGRR 163
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT------ 115
+ +V+ G G P + SRI + +++ +
Sbjct: 164 AVPHPDAVVVHGAGLINGAVTPLL--------ASRITTGVEIWQDEAARRQKSSSDGEAA 215
Query: 116 -----IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM--- 167
+++SGG +E+ + GV R+DI LE +S T +N F+ +
Sbjct: 216 SGRPVLVMSGGQGDDEPTSEASAMAEYAVGLGVPREDIVLEDRSTTTRENIAFTRELLAD 275
Query: 168 ---IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
N+ ++LV+S+YH R+ + SD ++ +A +Y+
Sbjct: 276 LGARHNVSYDQVLLVTSSYHAVRTAILA-----------SDMETSWAVAPAPTARYYVIN 324
Query: 225 LALKEYIGILIA 236
L+EY+ +L
Sbjct: 325 AWLREYVAVLTY 336
>gi|298244343|ref|ZP_06968149.1| protein of unknown function DUF218 [Ktedonobacter racemifer DSM
44963]
gi|297551824|gb|EFH85689.1| protein of unknown function DUF218 [Ktedonobacter racemifer DSM
44963]
Length = 239
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 77/221 (34%), Gaps = 26/221 (11%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+ I + I + L ++ + + + IV+L GT ++E +
Sbjct: 7 VLWAISAITLSFIFIWLLFYTRGKRFALRDKLQKVDAIVVL-AGTRGNVEFLHKKVE-TA 64
Query: 92 QSYSRIFETMRLYKSCK-----------QHSMHCTIIISGGDPQKHGLAES--------- 131
R + K + + G Q+ +A +
Sbjct: 65 ARLYRDGWAKHIICGGKFSAKVTDSPQLMSQEELRLAVDQGRIQEKDIARAAATWDIALG 124
Query: 132 -IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+K + GV D I LE +SL T + A++ +++ + IILV+S +H R+ L
Sbjct: 125 ARYMRDKAMAYGVPDDAIVLEEESLHTRETAEYVLDIVQKHKWYKIILVTSPFHQLRTYL 184
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
F + S+Y S P++ + +E +
Sbjct: 185 TFAKVFLPYDIQISNYYADSDSWHPMAWFLSKSN---RELL 222
>gi|297623587|ref|YP_003705021.1| hypothetical protein Trad_1356 [Truepera radiovictrix DSM 17093]
gi|297164767|gb|ADI14478.1| protein of unknown function DUF218 [Truepera radiovictrix DSM
17093]
Length = 176
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 28/183 (15%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + ++++G PS R+ LY++ I+++
Sbjct: 22 PTPGCPADTLLVMGAA--------QYDGVPSPAFARRLDRAFELYEAG----CAEKILVT 69
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG E L GV + ET+S + QN ++S +++ G+ +++V
Sbjct: 70 GGKRPGDRFTEGEAGVRYLAARGVPETALLKETKSRSSLQNLRYSLPLVR---GERVLIV 126
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ H R+ Q G++ + + L+E + AY
Sbjct: 127 TDDLHTYRTGFLAQELGLDATVTGVPTKGPRLPYL------------LRE-AASVTAYLL 173
Query: 240 GNR 242
G R
Sbjct: 174 GRR 176
>gi|300722464|ref|YP_003711752.1| putative vancomycin sensitivity, oxidoreductase [Xenorhabdus
nematophila ATCC 19061]
gi|297628969|emb|CBJ89554.1| putative vancomycin sensitivity, oxidoreductase [Xenorhabdus
nematophila ATCC 19061]
Length = 240
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 68/220 (30%), Gaps = 33/220 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I + F+ ++L + + + + + + + ++LG
Sbjct: 1 MWKRLITSVIFIISVLVLTAIMLDRWVS-------WKTAPYIFDDLRQLPEREVGMVLGT 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
RI + Y S K + + GD +H E I
Sbjct: 54 SKYYRGGKYNQYYFY------RIQGAVNAYNSGKVKYLLLS-----GDNAQHNYNEPITM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+++G+ +I ++ T + + + +++ +H +R+ L H
Sbjct: 103 RKDLIKAGIPASNIVMDFAGFRTLDSIIRTRKVFDTDDFT---IITQRFHCERALLIAIH 159
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
FGI + P N +E + L
Sbjct: 160 FGIEAQCYAV----------PSPKNMMTIR--FREVLARL 187
>gi|262204353|ref|YP_003275561.1| hypothetical protein Gbro_4535 [Gordonia bronchialis DSM 43247]
gi|262087700|gb|ACY23668.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 334
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P +P+ IV+LG G + + + +R+ KS + +
Sbjct: 129 PDTTPKNVSGRPTIVILGYGLGAD-------GKMAAELINRVRAG----KSQAELTTSAP 177
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I++S G K G+ E+ L+++GV+ I E +S T NAQ +++++ ++
Sbjct: 178 IVVS-GGVPKKGITEASAMQKWLVDNGVDASRITTEDKSGSTVANAQNTAAILAGKGVRD 236
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCS 204
IILV+S H++R+ F G+ AS +
Sbjct: 237 IILVTSPSHIRRAAADFAATGLRVVASVT 265
>gi|169628519|ref|YP_001702168.1| hypothetical protein MAB_1428 [Mycobacterium abscessus ATCC 19977]
gi|169240486|emb|CAM61514.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 188
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 23/182 (12%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ + + + +I + + +P IV+LG G ++
Sbjct: 8 RWATAAVVSAVLALCVPVIASAEPLAAGKDFSKP-----------AIVILGYGLKPDGSM 56
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+ R+ + + II G ++G++E+ N L+ G
Sbjct: 57 RDKLYQ-------RVATGRAIANMFPN-----SFIIVTGGNPQNGVSEADQMRNMLVGLG 104
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
D I +E ++ T QNAQFS + K IILV+++ H +R+ F G N A+
Sbjct: 105 YPSDRIIVEPRANSTVQNAQFSVPLAKQAGASGIILVTNSTHQQRADRNFADAGGNVLAT 164
Query: 203 CS 204
S
Sbjct: 165 AS 166
>gi|74313520|ref|YP_311939.1| hypothetical protein SSON_3119 [Shigella sonnei Ss046]
gi|73856997|gb|AAZ89704.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 191
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 46/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY K ++ GD + E+ L+ GV I
Sbjct: 31 NRYFTRRIDTAAALYHVGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 85
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 86 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 142
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 143 KHGFYTQ----------LREKLARVSA 159
>gi|260466676|ref|ZP_05812863.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259029539|gb|EEW30828.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 241
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 72/229 (31%), Gaps = 40/229 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L +IR + G+G + L +P + I++L
Sbjct: 30 RLKAAIRISALSLLVLATLFAGGFGWFANKVSH---------LTTPANPTKADAIIVLTG 80
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ M L S K + + + + L +
Sbjct: 81 G------------------QSRLDAAMELLASGKGERLLISGVHPSA--SRRQLQAATGG 120
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ KL V+ D +LDT NA+ S+ + N +ILV++ YH+ RS L
Sbjct: 121 DKKLFSCCVDIDR-----AALDTIGNAEQSAKWVTNHAYGTVILVTNNYHMPRSLLEMGR 175
Query: 195 --FGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G + + + + EY L+A RG
Sbjct: 176 LLHGARLEPYPVVNSNLDNGGWLTKPRAL---RVLFTEYTKYLLALARG 221
>gi|307943505|ref|ZP_07658849.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773135|gb|EFO32352.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 245
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 82/218 (37%), Gaps = 38/218 (17%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
++C + +G + + + + IV+L G
Sbjct: 54 LACVLGFIVVVGLVVGS--FASFAER---VATIETPRDPRADAIVVLTGGK--------- 99
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
RI + MRL + + + + + G + +A++ + L V+
Sbjct: 100 ---------ERISKAMRLLEEGRAERLLISGVHPGSSAR--QIAQATSSDLPLFTCCVDL 148
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKA 201
D +L+T NA ++S + + + +++V+SAYHL R++L + G+
Sbjct: 149 DR-----AALNTLGNATETASWVAEHEFETLLVVTSAYHLPRAELELAEVLPNAGL--LP 201
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ + ++F +L ++EY+ +A R
Sbjct: 202 YPV--FSSERDLTAWYSSFDTLKLLMREYVKYTLARLR 237
>gi|320106656|ref|YP_004182246.1| hypothetical protein AciPR4_1429 [Terriglobus saanensis SP1PR4]
gi|319925177|gb|ADV82252.1| protein of unknown function DUF218 [Terriglobus saanensis SP1PR4]
Length = 223
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 76/221 (34%), Gaps = 27/221 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ F+LL G + + + + + + I + G
Sbjct: 12 KKSHPLWMFFLFVLLLCIAWCGWVYFQINR---------VARGDEARGADAIAVFGAA-- 60
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS ++R+ + LY+ I + G ++ G E V +
Sbjct: 61 ------QYLGHPSPVYHARLDHAVTLYRRSIAP---IVITLGGSGDKRSGATEGGVGRDY 111
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
LL +G+ D I ET+S+DT Q A+ +++ I++VS + HL R + G+
Sbjct: 112 LLANGIPFDHIIAETRSIDTEQQAESLATIAHVRGLHRIVVVSDSTHLFRIRELCHEQGL 171
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ L + + + + + E
Sbjct: 172 DV-------LTSPRPTLGRISAYDAFTRTMHEIFSYTFLRM 205
>gi|24114381|ref|NP_708891.1| hypothetical protein SF3126 [Shigella flexneri 2a str. 301]
gi|30064429|ref|NP_838600.1| hypothetical protein S3333 [Shigella flexneri 2a str. 2457T]
gi|24053550|gb|AAN44598.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30042688|gb|AAP18411.1| hypothetical protein S3333 [Shigella flexneri 2a str. 2457T]
gi|281602471|gb|ADA75455.1| putative membrane protein [Shigella flexneri 2002017]
gi|313648419|gb|EFS12862.1| hypothetical protein SF2457T_3144 [Shigella flexneri 2a str. 2457T]
gi|332754353|gb|EGJ84719.1| hypothetical protein SF274771_3702 [Shigella flexneri 2747-71]
gi|333014857|gb|EGK34202.1| hypothetical protein SFK304_3931 [Shigella flexneri K-304]
Length = 230
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATIFIADRVMVNASKQLTWGDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 160 TIWLAKQYGIDAIGFNAPDLNMKHGFY 186
>gi|332086610|gb|EGI91752.1| hypothetical protein SD15574_3629 [Shigella dysenteriae 155-74]
Length = 203
Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 46/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 43 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 97
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + +S +H +R+ + +GI+ + LN
Sbjct: 98 CDYAGFSTLDSVVRAKKVFGENHITT---ISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 154
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 155 KHGFYTQ----------LREKLARVSA 171
>gi|300937981|ref|ZP_07152763.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300457022|gb|EFK20515.1| conserved hypothetical protein [Escherichia coli MS 21-1]
Length = 230
Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 64/209 (30%), Gaps = 26/209 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+F + + KI +LL I ++ + ++ ++
Sbjct: 4 VFARLLLRICFSRRTLKI----GCLLLLIAGATLFIADRVMVNASQQLTWSDVNAVPARN 59
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+++ G + RI LY + K ++ GD +
Sbjct: 60 VGLLLGARPG--------------NRYFTRRIDSAAALYHAGKVKW-----LLVSGDNGR 100
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E+ L+ GV I + T + ++ + ++S +H
Sbjct: 101 KNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRANKVFSENHIT---IISQEFHN 157
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSII 214
+R+ + +GI+ + LN + +
Sbjct: 158 QRAIWLAKQYGIDAIGFNAPDLNMKHGLY 186
>gi|322613625|gb|EFY10566.1| hypothetical protein SEEM315_07855 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621218|gb|EFY18076.1| hypothetical protein SEEM971_20584 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624281|gb|EFY21115.1| hypothetical protein SEEM973_20700 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627981|gb|EFY24770.1| hypothetical protein SEEM974_20590 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633099|gb|EFY29841.1| hypothetical protein SEEM201_11685 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636324|gb|EFY33032.1| hypothetical protein SEEM202_14388 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643499|gb|EFY40061.1| hypothetical protein SEEM954_04770 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647610|gb|EFY44098.1| hypothetical protein SEEM054_00615 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648592|gb|EFY45039.1| hypothetical protein SEEM675_03746 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653644|gb|EFY49970.1| hypothetical protein SEEM965_21391 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657752|gb|EFY54020.1| hypothetical protein SEEM19N_17516 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663853|gb|EFY60052.1| hypothetical protein SEEM801_03806 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669136|gb|EFY65287.1| hypothetical protein SEEM507_10771 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672871|gb|EFY68978.1| hypothetical protein SEEM877_00015 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678139|gb|EFY74202.1| hypothetical protein SEEM867_02802 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681315|gb|EFY77348.1| hypothetical protein SEEM180_21294 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687755|gb|EFY83722.1| hypothetical protein SEEM600_15091 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195567|gb|EFZ80744.1| hypothetical protein SEEM581_10355 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199752|gb|EFZ84842.1| hypothetical protein SEEM501_16935 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202500|gb|EFZ87540.1| hypothetical protein SEEM460_17505 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208012|gb|EFZ92958.1| hypothetical protein SEEM020_19130 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212436|gb|EFZ97253.1| hypothetical protein SEEM6152_09408 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215082|gb|EFZ99830.1| hypothetical protein SEEM0077_03989 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222812|gb|EGA07177.1| hypothetical protein SEEM0047_10245 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224107|gb|EGA08400.1| hypothetical protein SEEM0055_22220 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230431|gb|EGA14549.1| hypothetical protein SEEM0052_19224 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235217|gb|EGA19303.1| hypothetical protein SEEM3312_06763 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239258|gb|EGA23308.1| hypothetical protein SEEM5258_06650 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244384|gb|EGA28390.1| hypothetical protein SEEM1156_00557 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247001|gb|EGA30967.1| hypothetical protein SEEM9199_20625 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323254066|gb|EGA37886.1| hypothetical protein SEEM8282_00135 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256177|gb|EGA39913.1| hypothetical protein SEEM8283_11271 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262647|gb|EGA46203.1| hypothetical protein SEEM8284_02776 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267257|gb|EGA50741.1| hypothetical protein SEEM8285_20762 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269341|gb|EGA52796.1| hypothetical protein SEEM8287_11652 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 230
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 73/227 (32%), Gaps = 34/227 (14%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ LC R+ ++CF+L+ + + L+ + + ++ +++
Sbjct: 8 FIRRLCF-TRRALTVACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLG 65
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD K E
Sbjct: 66 AKPG--------------NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEP 106
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + + ++S A+H +R+
Sbjct: 107 SAMQQALIAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWL 163
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q +GI+ + LN + T ++E + + A
Sbjct: 164 AQQYGIDAIGVNAPDLNKRHG----------TYTRIREKLARVSAVL 200
>gi|285017167|ref|YP_003374878.1| hypothetical protein XALc_0349 [Xanthomonas albilineans GPE PC73]
gi|283472385|emb|CBA14890.1| hypothetical protein XALc_0349 [Xanthomonas albilineans]
Length = 204
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 61/176 (34%), Gaps = 13/176 (7%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y + + I++LG PS RI + LY+
Sbjct: 34 YIVWVGDRDQAAPADAIIVLGAAAYDAK--------PSPVFEERIRHALDLYRRG----Y 81
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
T+I +GG AE+ V L GV D + +ET S T QN + +++
Sbjct: 82 APTLIFTGGFGNGARFAEAQVARRYALRQGVPADAVLIETISRTTRQNLIQARQIMRAHG 141
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+ +I+VS H+ R+ + I+ AS + + + S
Sbjct: 142 LRRVIVVSDPLHMARALRLCRELQIDALASSTP-SSRFRSFQTRWPFLLQEVYFFH 196
>gi|260581178|ref|ZP_05848998.1| sanA protein [Haemophilus influenzae RdAW]
gi|1175853|sp|P45130|SANA_HAEIN RecName: Full=Protein sanA homolog
gi|1574720|gb|AAC22915.1| sanA protein (sanA) [Haemophilus influenzae Rd KW20]
gi|260092206|gb|EEW76149.1| sanA protein [Haemophilus influenzae RdAW]
Length = 244
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 68/229 (29%), Gaps = 25/229 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + +L + F LL++ I+L L + + + +
Sbjct: 16 FFIMFTTMLVKKFSPKFTALFRTLLYAI-----FALIILCLLVDRGISFYVRDKIFTNID 70
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ + + + +P+ SR+ L + K + + + GD +
Sbjct: 71 ELPFRPCALVLGTSKYTVSGKPNVYYDSRLMAAKSLIEQQKVNYLLLS-----GDNRTLQ 125
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E L + GV + + + T + + + + +VS +H +R
Sbjct: 126 YNEPRAMFRDLRKMGVPKTLMFRDFAGFRTLDSVIRADKIFQVKTFT---IVSQKFHCER 182
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ L Q I+ + ++E + A
Sbjct: 183 ALLIAQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 219
>gi|16761994|ref|NP_457611.1| hypothetical protein STY3402 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143481|ref|NP_806823.1| hypothetical protein t3142 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|167553271|ref|ZP_02347021.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|168243055|ref|ZP_02667987.1| SanA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194442486|ref|YP_002042489.1| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194450555|ref|YP_002047259.1| hypothetical protein SeHA_C3517 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|213053187|ref|ZP_03346065.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213427203|ref|ZP_03359953.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213583081|ref|ZP_03364907.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
gi|213621929|ref|ZP_03374712.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
gi|213646097|ref|ZP_03376150.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|238910024|ref|ZP_04653861.1| SanA protein [Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
gi|25306413|pir||AD0894 conserved hypothetical protein STY3402 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504297|emb|CAD07746.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139115|gb|AAO70683.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194401149|gb|ACF61371.1| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194408859|gb|ACF69078.1| SanA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205322260|gb|EDZ10099.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205337915|gb|EDZ24679.1| SanA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|320087676|emb|CBY97440.1| Uncharacterized protein ygjQ [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|326624979|gb|EGE31324.1| SanA protein [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 230
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 34/227 (14%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ LC R+ ++CF+L+ + + L+ + + ++ +++
Sbjct: 8 FIRRLCF-TRRALTVACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLG 65
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD K E
Sbjct: 66 AKPG--------------NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEP 106
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + + ++S A+H +R+
Sbjct: 107 SAMQQALIAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWL 163
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q +GI+ + LN + T L+E + + A
Sbjct: 164 AQQYGIDAIGVNAPDLNKRHG----------TYTRLREKLARVSAVL 200
>gi|194471333|ref|ZP_03077317.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197248296|ref|YP_002148153.1| SanA protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|194457697|gb|EDX46536.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197211999|gb|ACH49396.1| SanA protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
Length = 230
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 34/227 (14%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ LC R+ ++CF+L+ + + L+ + + ++ +++
Sbjct: 8 FIRRLCF-TRRALTVACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLG 65
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD K E
Sbjct: 66 AKPG--------------NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEP 106
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + + ++S A+H +R+
Sbjct: 107 SAMQQALIAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWL 163
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q +GI+ + LN + T L+E + + A
Sbjct: 164 AQQYGIDAIGVNAPDLNKRHG----------TYTRLREKLARVSAVL 200
>gi|126642093|ref|YP_001085077.1| hypothetical protein A1S_2048 [Acinetobacter baumannii ATCC 17978]
gi|126387977|gb|ABO12475.1| hypothetical protein A1S_2048 [Acinetobacter baumannii ATCC 17978]
Length = 114
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLYF 192
L GV+ LE +S++T +N +FSS +++ G ++LV+ YH+ R++ F
Sbjct: 1 MQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLLQKKGGAPTVMLVTDEYHMPRTRRLF 58
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
GI T + P N+ + A E + + G
Sbjct: 59 ALNGIETIPVTAPMPTPLTRWQPSIQNYDHSRRANYELLATIRDMLFG 106
>gi|163801101|ref|ZP_02195001.1| SanA protein [Vibrio sp. AND4]
gi|159175450|gb|EDP60247.1| SanA protein [Vibrio sp. AND4]
Length = 244
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 71/234 (30%), Gaps = 27/234 (11%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+F ++ L S +++ LL I + Q +
Sbjct: 1 MLFSRMASNWKLKFSWKRLALALSIFLLSLLFAVIAIDRWVALQAQD---KIYTDYVQLP 57
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + V+LG I + RI + LYK K + GD
Sbjct: 58 EHEVAVVLGTSKYIGKI-------LNTYYSHRINAAIELYKKGKVRQFLLS-----GDNA 105
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E LL++GV D I L+ T + + + + + ++V+ +H
Sbjct: 106 HRSYNEPWTMKRDLLKAGVPEDVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFH 162
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+R+ + I+ + A + +E + + A+
Sbjct: 163 CERALFIADAYNIDAQCLAVAGPTASK---------QKLNMRARELMARVKAFL 207
>gi|251790002|ref|YP_003004723.1| hypothetical protein Dd1591_2403 [Dickeya zeae Ech1591]
gi|247538623|gb|ACT07244.1| protein of unknown function DUF218 [Dickeya zeae Ech1591]
Length = 251
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 52/191 (27%), Gaps = 16/191 (8%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
K F + + + + Q + V+LG
Sbjct: 2 WKRLIFGLFATILVLACSAFLLDRCIS--WRTAPYIYEDVQDLPPRQVGVVLGTA----- 54
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ RI + Y S K + + GD + E + L+
Sbjct: 55 -KYYRTGVINQYYLFRIQGALNAYNSGKVSYLLLS-----GDNAQQSYNEPMTMRRDLIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV +I L+ T + + + +++ +H +R+ H GI +
Sbjct: 109 AGVPPANIVLDYAGFRTLDSIVRTRKVFDTNDFT---IITQRFHCERALFIALHKGIQAQ 165
Query: 201 ASCSDYLNAYY 211
+
Sbjct: 166 CFAVPSPKDIW 176
>gi|332827361|gb|EGK00118.1| hypothetical protein HMPREF9455_03525 [Dysgonomonas gadei ATCC
BAA-286]
Length = 218
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 24/177 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
++LG I + RI LY + K +
Sbjct: 45 HTDSIPPQKAALVLGAARY-------IGGRQNLYFTYRIRAAKELYDAGK-----VKAFV 92
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GD E+ ++ L+E+GV D I ++ L T + S + I+
Sbjct: 93 VSGDNSTKDYNEAQDMHDALVEAGVPGDIIYMDYAGLRTLDSVVRMSEIFGQKSF---II 149
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
VS +H +R+ Q++G+ + I L+ Y T+ ++E +
Sbjct: 150 VSQEFHNERAIFLAQYYGLEAYGYNAKD-------IDLNRFSYRTK--IRELFARVK 197
>gi|260582931|ref|ZP_05850715.1| SanA protein [Haemophilus influenzae NT127]
gi|260094031|gb|EEW77935.1| SanA protein [Haemophilus influenzae NT127]
Length = 244
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 67/229 (29%), Gaps = 25/229 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + +L + F LL++ I+L L + + + +
Sbjct: 16 FFIMFTAMLVKKFSPKFTALFRALLYAI-----FALIILCLLVDRGVSFYVRDKIFTNID 70
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ + + + +P+ SR+ L + K + + + GD +
Sbjct: 71 ELPFRPYALVLGTSKYTVSGKPNVYYDSRLTAAKNLIEQQKVNYLLLS-----GDNRTLQ 125
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E L + GV + + T + + + + +VS +H +R
Sbjct: 126 YNEPRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVKTFT---IVSQKFHCER 182
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ L Q I+ + ++E + A
Sbjct: 183 ALLIAQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 219
>gi|167757485|ref|ZP_02429612.1| hypothetical protein CLORAM_03035 [Clostridium ramosum DSM 1402]
gi|237735048|ref|ZP_04565529.1| membrane-spanning protein [Mollicutes bacterium D7]
gi|167702482|gb|EDS17061.1| hypothetical protein CLORAM_03035 [Clostridium ramosum DSM 1402]
gi|229381824|gb|EEO31915.1| membrane-spanning protein [Coprobacillus sp. D7]
Length = 351
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 94/239 (39%), Gaps = 27/239 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ I L+++ L + + M+ + L I + L ++ L P
Sbjct: 107 LVAVGIILLITLSSFLGRINPPLPIMALWSGLIVMILFLTFHIFL--FIETLILTNLFHP 164
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIIS 119
+K+ N I++LG+G I S RI ++ K ++ +++S
Sbjct: 165 --RKNLNYIIVLGSGL--------INGNVSPLLAKRIQAALKFAKKQEKKKGFAPYLLMS 214
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNI 176
GG AE++ +E G + I E +S +T +N QFS ++++
Sbjct: 215 GGQGSDETRAEALAMKEYAIEQGYSEELIITEEKSKNTLENMQFSKAVMEEKSHGENYKC 274
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
SS+YHL R+ +Y + G+ +A +YL L+EYI L
Sbjct: 275 AYASSSYHLMRAGIYARQVGLIMSGLG-----------GKTAFYYLANAVLREYIAYLA 322
>gi|241206553|ref|YP_002977649.1| hypothetical protein Rleg_3867 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860443|gb|ACS58110.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 238
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 77/232 (33%), Gaps = 48/232 (20%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +R F + F G+ L P + + IV+L G
Sbjct: 30 IRRLLRWGGFACLLAIALVFGGFLRFAD----------SVTTLKPPAEPKADAIVVLTGG 79
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
Y RI + + L + + + + + + +
Sbjct: 80 ------------------YQRIDQAVELLQKGAGKRLLISGVHPT--TTPAQIRKMTQGS 119
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR--SQLYFQ 193
L V+ ++DT NA+ +S+ I +++++V++ YH+ R ++L +
Sbjct: 120 ADLFSCCVDI-----GYDAIDTIGNAEEASNWIHTKGYRSVLIVTNNYHMPRSLAELSYV 174
Query: 194 HFGINTKASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
I A D + + P + + L EY+ +L G R
Sbjct: 175 DPDIEFIAYPVVNSDLKSRNWFTDPNA-----MRVMLAEYVKVL---LTGAR 218
>gi|89053049|ref|YP_508500.1| hypothetical protein Jann_0558 [Jannaschia sp. CCS1]
gi|88862598|gb|ABD53475.1| protein of unknown function DUF218 [Jannaschia sp. CCS1]
Length = 153
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I++LG P +R R L+ + ++I G +
Sbjct: 2 TAILILGAAVWPDGPSPTLR--------RRTLHGAALFHGGRGD-----VVIPCGGLGRF 48
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E+ L ++GV D I+LE S +T +N + + ++ + +++VS AYHL
Sbjct: 49 PPTEAEAMAALLRDAGVPEDRIRLERTSTNTVENIRHALPLLAGE--RCVLIVSDAYHLP 106
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R++L + G+ S + P + + L+E G++ R
Sbjct: 107 RARLIARREGLEVSVSA--PPLTGARVWPQAKGW------LREIPGLIAVLLR 151
>gi|259047668|ref|ZP_05738069.1| membrane protein [Granulicatella adiacens ATCC 49175]
gi|259035859|gb|EEW37114.1| membrane protein [Granulicatella adiacens ATCC 49175]
Length = 343
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 94/236 (39%), Gaps = 25/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ F ++ L Q + +++ F++ F + + Y +
Sbjct: 105 LILLFFGVIIIRALNNQYFYENHWLNIFLIFFI---YSYVIFGFAFFGFLFYSILYVFIP 161
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+K + I++ G G + RI + + +K K + + +I SGG
Sbjct: 162 KRKQYDFIIIHGAGLLDGE-------RVTPLLKCRIDKAVEAFK--KSKNPNIKLIASGG 212
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILV 179
++E+ N L+E V R+ + LE +S T++N FS + + ++ + V
Sbjct: 213 KGADEKISEAHAILNYLMEETDVPRESVLLEEESRTTYENLLFSKRLGETFLKEPRFLFV 272
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + G+ +A++Y+ ++EY+ + +
Sbjct: 273 TNDYHVFRTSTYAKMIGMQGDGLGC-----------TTASYYIPSAFIREYVALCV 317
>gi|170717821|ref|YP_001784882.1| hypothetical protein HSM_1562 [Haemophilus somnus 2336]
gi|168825950|gb|ACA31321.1| protein of unknown function DUF218 [Haemophilus somnus 2336]
Length = 231
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 69/203 (33%), Gaps = 17/203 (8%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+S+ + ++++ +F+F II + ++Q +
Sbjct: 8 LSFPQWIITLVKRLLHYGFAFSIFTFFSLIIIDRCIAWYVQDR---IYTKIEELPSRPYG 64
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG P + +R+ T+ L+K K + + GD +
Sbjct: 65 IVLGTAKYFSKNNPNLYYN------NRLTATVELFKQEKIDYLLLS-----GDNRTMQYN 113
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E I L + + D + ++ T + + + K + +++ +H +R+
Sbjct: 114 EPITMFKDLRKMDIPEDVMYMDFAGFRTLDSVIRADKVFKAQP---MTIITQQFHCERAL 170
Query: 190 LYFQHFGINTKASCSDYLNAYYS 212
+ + I+ + Y S
Sbjct: 171 FIAKFYDIDAICFAAKSPANYLS 193
>gi|302847168|ref|XP_002955119.1| hypothetical protein VOLCADRAFT_106645 [Volvox carteri f.
nagariensis]
gi|300259647|gb|EFJ43873.1| hypothetical protein VOLCADRAFT_106645 [Volvox carteri f.
nagariensis]
Length = 251
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 77/256 (30%), Gaps = 46/256 (17%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ +S LF + + L+ L ++ ++LG
Sbjct: 3 RVSLLSTAGALFVGLLAFALSPACLRWLHGLLAARTPPLPKDAIADVAIVLGYALCRN-- 60
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ R+ + + + + + GG + E+ V +
Sbjct: 61 -----GSLTEPLKGRVQAGVDAFLQGRARHLLFSGSHPGGVVVRR--TEANVMREYAEQL 113
Query: 142 GV------ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ-- 193
+ E S T++NA FS ++ K K +++V+S +H RS+L F+
Sbjct: 114 MPAGEAAGWAERWLEEDASTSTYENALFSLAICKEKGWKTLLIVTSPFHQLRSELVFRRL 173
Query: 194 -----------------------------HFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
H + + + + PL+
Sbjct: 174 VSEATKAAAGLAGQEAASAGGAGLARKDEHLAMEVFMARAAMVPHAGYFSPLANRLVDLW 233
Query: 225 LALKEYIGILIAYYRG 240
++E + ++ Y +G
Sbjct: 234 DWIRELLALVYYYTKG 249
>gi|291618091|ref|YP_003520833.1| SanA [Pantoea ananatis LMG 20103]
gi|291153121|gb|ADD77705.1| SanA [Pantoea ananatis LMG 20103]
Length = 252
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 63/191 (32%), Gaps = 17/191 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+L + ++++F F++L + + + + + V+LG
Sbjct: 9 RVLRRMLKRVFIALLFIILTMVATALGLDRWIS---WKTAPYIYDNLASLPHRQVGVVLG 65
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+ R+ + Y S K + + + GD + E +
Sbjct: 66 TA------KYYRTGVINQYYLYRMQGALNAYNSGKVNYLLLS-----GDNAQQSYNEPMT 114
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L++ GV+ DI L+ T + + + I+++ +H +R+
Sbjct: 115 MRRDLIKGGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAL 171
Query: 194 HFGINTKASCS 204
H GI +
Sbjct: 172 HLGIQAQCYAV 182
>gi|329925094|ref|ZP_08280038.1| hypothetical protein HMPREF9412_6526 [Paenibacillus sp. HGF5]
gi|328940213|gb|EGG36545.1| hypothetical protein HMPREF9412_6526 [Paenibacillus sp. HGF5]
Length = 194
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LG + P ++ R+ E +L++ II G
Sbjct: 28 QPGKADALIVLGYVSKDGRIHPLLK--------ERLDEAYKLFRQY-----GHKYIIVSG 74
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L+E G+ + E +S +T QN FS +++ K+ +++++
Sbjct: 75 GAVGSRRSEAELMEKYLVEKGIPAKRVLKEDKSNNTVQNLIFSKQLMEQYHLKSFVIITN 134
Query: 182 AYHLKRSQLYFQHFGIN 198
+H++R++ GI
Sbjct: 135 LFHVRRTKYIMHRLGIK 151
>gi|150397743|ref|YP_001328210.1| hypothetical protein Smed_2545 [Sinorhizobium medicae WSM419]
gi|150029258|gb|ABR61375.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 232
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 78/224 (34%), Gaps = 35/224 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + +R+ FF+ L G+ + L P + IV+L G
Sbjct: 21 LRKLLRRSFFVLLAFLAVFIAGFLQFADTVAS----------LQPPPTPKADAIVVLTGG 70
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
RI + + L K + + + + + + +
Sbjct: 71 FQ------------------RIDQAVDLLKLGAGKRLLISGVHP--STTRSQIRRNTQSS 110
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L + V+ +++DT NA +S I++ + I++V++ YH+ RS L +
Sbjct: 111 ADLFKCCVDIGR-----EAVDTIGNATETSHWIRSRGYRTILVVTNNYHMPRSLLELRRA 165
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
T+ +N+ N + + L EY+ ++ R
Sbjct: 166 RPETEFVAYPVVNSDLKTTNWLRNPLVLKAILLEYVKYSVSSLR 209
>gi|307247447|ref|ZP_07529493.1| hypothetical protein appser2_4420 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306856063|gb|EFM88220.1| hypothetical protein appser2_4420 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 196
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 28/199 (14%)
Query: 38 WGIIPTILLKHLQFSYQR--PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ I ++ + Y + + V+LG P + +
Sbjct: 3 FLSIAIFIIDYATGIYVKDNIYTDIEKLPKHRNAVVLGTSKFYAKGTPNLYYKY------ 56
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ ++L K ++ GD + E V N L G+ ++ I+ +
Sbjct: 57 RLEAAVQLINKGKAKK-----LLVSGDNKTPYYNEPKVMLNDLYNMGIPKNMIEQDFAGY 111
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + +S + K + I+VS +H +R+ ++ IN + Y + +
Sbjct: 112 RTLDSIVRASKVYK---LEPFIIVSQQFHCERALFIAKYHNINAVCFAAKYPEGHIKVR- 167
Query: 216 LSANFYLTELALKEYIGIL 234
L+E++ +
Sbjct: 168 -----------LREFLARI 175
>gi|39937792|ref|NP_950068.1| hypothetical protein RPA4734 [Rhodopseudomonas palustris CGA009]
gi|39651652|emb|CAE30174.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 255
Score = 58.6 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 36/225 (16%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTIL--LKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ R + + L +G G L L+ + + + + IV+L
Sbjct: 33 RRGGRLRATIVAVLALGFLVGAGGFVVFLSQLRGAEQK---------PRHNADGIVVLTG 83
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G+ SR+ + + L + + + + + +
Sbjct: 84 GS------------------SRVSDAVELLAAGYGKRLLISGVHRTNGARDISRSVPESR 125
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ V+ D ++DT NA + ++ +++I+V+S YH+ R+ H
Sbjct: 126 DWF--SCCVDLDR-----SAVDTRSNASETRRWVQERGFRSLIVVTSNYHMPRAIAEMSH 178
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + + P + L L EY L R
Sbjct: 179 AMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELR 223
>gi|82545342|ref|YP_409289.1| hypothetical protein SBO_2947 [Shigella boydii Sb227]
gi|81246753|gb|ABB67461.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 227
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 64/223 (28%), Gaps = 32/223 (14%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
LL + +LL I ++ + ++ ++ +++
Sbjct: 5 LLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLLLGAR 64
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + RI LY + K ++ GD + E+
Sbjct: 65 PG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASG 105
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV I + T + + + ++S +H +R+ +
Sbjct: 106 MQKALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAK 162
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ I+ + LN + L+E + + A
Sbjct: 163 QYSIDAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 195
>gi|332752765|gb|EGJ83150.1| hypothetical protein SFK671_3724 [Shigella flexneri K-671]
gi|332765079|gb|EGJ95306.1| hypothetical protein SF293071_3656 [Shigella flexneri 2930-71]
Length = 203
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 43 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 97
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 98 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRTIWLAKQYGIDAIGFNAPDLNM 154
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 155 KHGFYTQ----------LREKLARVSA 171
>gi|167855131|ref|ZP_02477903.1| SanA protein [Haemophilus parasuis 29755]
gi|167853766|gb|EDS25008.1| SanA protein [Haemophilus parasuis 29755]
Length = 235
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 67/222 (30%), Gaps = 32/222 (14%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ L + K CF L ++ + + ++
Sbjct: 19 WATRLSIWLVKGILGLCFPLFLLMFAIDFATGYWVR------DQIYTDVRQLPQREYALV 72
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG P + + R+ +++ K + ++ GD + E
Sbjct: 73 LGTAKYYPSGSPNLYYKY------RLDAAKAVFEHNKVNY-----LLVSGDNKTAYYNEP 121
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ L + G+ I+ + +T + + + + I++S +H +R+
Sbjct: 122 KMMTRDLRQMGIPWQRIRQDYAGYNTLDSIIRADKVFQLHPF---IIISQQFHCERALFI 178
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ I + Y +A+Y + ++E+
Sbjct: 179 AKFHQIEAVCFAAKYPDAHYKVR------------IREFFAR 208
>gi|222149964|ref|YP_002550921.1| hypothetical protein Avi_4029 [Agrobacterium vitis S4]
gi|221736946|gb|ACM37909.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 246
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 45/229 (19%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + +R + ++ G+ + P + + IV+L G
Sbjct: 34 LRRLLRYGGYAILLLMACLVAGFLHFAD----------DVTAMMPPAEPKADAIVVLTGG 83
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
Y RI + + L + + + + + + +
Sbjct: 84 ------------------YQRIDQAVDLLRKGSGRRLLISGVHP--STSPATIRKMTQAS 123
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L V+ +++DT NA ++ I + ++++V+S YH++RS + +
Sbjct: 124 PDLFACCVDM-----GYRAIDTIGNANETAQWIHDKGFSSVLVVTSNYHMRRSLMELRRT 178
Query: 196 GINT--KASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
T D + P + + EY ILIAY R
Sbjct: 179 DHETQFIPYPVVTADLRTRAWYADPNA-----LRTLMSEYAKILIAYTR 222
>gi|16766521|ref|NP_462136.1| integral membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161616217|ref|YP_001590182.1| hypothetical protein SPAB_04021 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|16421779|gb|AAL22095.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|161365581|gb|ABX69349.1| hypothetical protein SPAB_04021 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|261248389|emb|CBG26226.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995419|gb|ACY90304.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159774|emb|CBW19293.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914249|dbj|BAJ38223.1| hypothetical protein STMDT12_C32800 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|323131582|gb|ADX19012.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332990087|gb|AEF09070.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 230
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 34/227 (14%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ LC R+ ++CF+L+ + + L+ + + ++ +++
Sbjct: 8 FIRRLCF-TRRALTVACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLG 65
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD K E
Sbjct: 66 AKPG--------------NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEP 106
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + + ++S A+H +R+
Sbjct: 107 SAMQQALMAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWL 163
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q +GI+ + LN + T L+E + + A
Sbjct: 164 AQQYGIDAIGVNAPDLNKRHG----------TYTRLREKLARVSAVL 200
>gi|167625319|ref|YP_001675613.1| hypothetical protein Shal_3408 [Shewanella halifaxensis HAW-EB4]
gi|167355341|gb|ABZ77954.1| protein of unknown function DUF218 [Shewanella halifaxensis
HAW-EB4]
Length = 166
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+I++LG + + + S + SR + Y+ Q + T +
Sbjct: 4 VIIVLG-------SPNDDQGKLSDIALSRCQAALATYQKQPQSKLLLTGGFGA-HFNQTT 55
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++ L++ GV D S TF++A + +I+ + I LV+S +H++R
Sbjct: 56 TPHALYCQRYLIKHGVLADAFTDIALSRFTFEDATLAKPIIEQHRFNEITLVTSEFHMQR 115
Query: 188 SQLYF 192
++L F
Sbjct: 116 AKLIF 120
>gi|145638833|ref|ZP_01794441.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae PittII]
gi|145271805|gb|EDK11714.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae PittII]
gi|309750816|gb|ADO80800.1| SanA protein [Haemophilus influenzae R2866]
Length = 226
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 70/227 (30%), Gaps = 25/227 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + + F LL++ I+L L + + + + +
Sbjct: 2 FTAMLVKKLSPKFTALFRALLYAI-----FALIILCLLVDRGVSFYVRDKIFTNIDELPF 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+ + + +P+ SR+ L + K + + + GD + E
Sbjct: 57 RPCALVLGTSKYTVSGKPNVYYDSRLMAAKSLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + T + + + K +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVPETLMFRDFAGFRTLDSVVRADKIFKVQAFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ I+ + +L+ ++E + A
Sbjct: 169 AKAHNIDAICFVAKQPE-----------LHLSTR-IREVFARIKAVL 203
>gi|323165039|gb|EFZ50829.1| hypothetical protein SS53G_4502 [Shigella sonnei 53G]
Length = 203
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 46/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY K ++ GD + E+ L+ GV I
Sbjct: 43 NRYFTRRIDTAAALYHVGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 97
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 98 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 154
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 155 KHGFYTQ----------LREKLARVSA 171
>gi|163787816|ref|ZP_02182263.1| putative protein involved in barrier function of the cell envelope
[Flavobacteriales bacterium ALC-1]
gi|159877704|gb|EDP71761.1| putative protein involved in barrier function of the cell envelope
[Flavobacteriales bacterium ALC-1]
Length = 183
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 20/159 (12%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + A + RI ++LY++ K I+ GD + G E +
Sbjct: 22 GLVLGTGKYAASGNINLYYKYRIDAAVKLYRAGKIEY-----ILVSGDNGRKGYDEPTDF 76
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ L+ G+ D I L+ T + + + +I ++S +H +R+ H
Sbjct: 77 KSDLIAKGIPEDKIFLDYAGFRTLDSVIRAKEIFGQ---TSITIISQEFHNQRAVYIANH 133
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
F I A + N I + +EY+
Sbjct: 134 FDIKAVAFNA--KNPRQGKITRA----------REYLAR 160
>gi|148974941|ref|ZP_01811921.1| hypothetical protein VSWAT3_25489 [Vibrionales bacterium SWAT-3]
gi|145965450|gb|EDK30699.1| hypothetical protein VSWAT3_25489 [Vibrionales bacterium SWAT-3]
Length = 365
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 67/175 (38%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D IV LG ++ I R+ T+ + K+ I+ G
Sbjct: 191 DHGAIVTLGYALNPDGSMHQI-------LIERLETTLAMAKANPDAM-----IVLTGGVP 238
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
K+ E + + L+E GV +D I E + T NA FSS + K+ ++SSA H
Sbjct: 239 KNHKTEGKLMADWLIEKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL+ ++ E +GI R
Sbjct: 299 VRRGQTLFEVASWQTGPQGITFDTVSYPDKPLADLKKASDG---ELLGIYRDALR 350
>gi|148658348|ref|YP_001278553.1| hypothetical protein RoseRS_4260 [Roseiflexus sp. RS-1]
gi|148570458|gb|ABQ92603.1| protein of unknown function DUF218 [Roseiflexus sp. RS-1]
Length = 193
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 67/203 (33%), Gaps = 19/203 (9%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
G ++ L+ L L+ + + IV+LG +
Sbjct: 3 FGVLVLIASLILPLLV--APWLIVDDAGETADAIVVLGG---------------EAYPPN 45
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R + LYK + + T G Q ++ + V L G+ + + +
Sbjct: 46 RTIHALNLYKQQRAPVVVFTGGALPG--QPPEISSARVALRYALARGLPAEVALVVDTAQ 103
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T+ A + + +++I+V+ YH +R+ F+ + + + S P
Sbjct: 104 STYDEATLVRDLAAHHGWRSLIIVTDPYHTRRAVRTFRSIIPDVQVTASVAPFLDTFADP 163
Query: 216 LSANFYLTELALKEYIGILIAYY 238
LS + A E I +
Sbjct: 164 LSRGVRVWRYAAAELIKMAFYRL 186
>gi|329945798|ref|ZP_08293485.1| hypothetical protein HMPREF9056_01374 [Actinomyces sp. oral taxon
170 str. F0386]
gi|328528246|gb|EGF55224.1| hypothetical protein HMPREF9056_01374 [Actinomyces sp. oral taxon
170 str. F0386]
Length = 280
Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ ++LG +PS R+ LY S + + I+
Sbjct: 96 NSDTAGAPVAIVLGAAVHAD-------GQPSPWLSYRLDTAADLYTSGRVEA-----ILV 143
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GD ++ G E V + L G+ I L+ DT+ + + + +LV
Sbjct: 144 SGDNRRVGYDEPTVMRDYLTSKGIPSQAIALDYAGFDTYDTCVRARRIFG---IERALLV 200
Query: 180 SSAYHLKRSQLYFQ 193
+ +H R+ +
Sbjct: 201 TQDFHEPRAVAICR 214
>gi|148979911|ref|ZP_01815769.1| SanA protein [Vibrionales bacterium SWAT-3]
gi|145961515|gb|EDK26817.1| SanA protein [Vibrionales bacterium SWAT-3]
Length = 253
Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 26/225 (11%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+LL + F+ ++F +I Q R + + + V+LG
Sbjct: 14 YLLKAYKKLQGFLYGAFIVFLIGSATVIAIDYWVSWQAE-DRIIYDIDEVPEVEVAVVLG 72
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+ T+ RI + L+ K + GD E
Sbjct: 73 TSKYLGRTLNDYYKH-------RIEAAIELFDREKVDQFLLS-----GDNAHRSYNEPWT 120
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
LL++GV + I L+ T + + + +++ +H +R+
Sbjct: 121 MKRDLLKAGVPDERINLDYAGFRTLDSIVRAKKIFDTDNFL---IITQKFHCERALFIAN 177
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ I+ + + T + L+E A+
Sbjct: 178 SYDIHAQCLAVSGPTHHSG----------TSIRLREVFARTKAFL 212
>gi|315634363|ref|ZP_07889650.1| membrane protein SanA [Aggregatibacter segnis ATCC 33393]
gi|315476953|gb|EFU67698.1| membrane protein SanA [Aggregatibacter segnis ATCC 33393]
Length = 240
Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 68/219 (31%), Gaps = 33/219 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + R + F + I I + + + ++LG
Sbjct: 18 MKRLSRYMALFMAFFAILLVIVDQTIGYYV-------RNDIYYDIEKVPNRPYGLVLGTS 70
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ Y+R+ RL++ K + + GD + E
Sbjct: 71 KYFSDN------TLNLFYYNRLLTAQRLFEKRKVDYLLLS-----GDNRTLQYNEPRTML 119
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L + GV ++ I L+ T + + + + ++S +H +R+ +
Sbjct: 120 KDLKKMGVPQEFIYLDFAGFRTLDSVVRADQVFQAHSLT---IISQKFHCERALFIAKFH 176
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I+ +DY Y T++ ++E+ L
Sbjct: 177 DIDAICFVADYPQGY------------TKVRVREFFARL 203
>gi|192293574|ref|YP_001994179.1| hypothetical protein Rpal_5216 [Rhodopseudomonas palustris TIE-1]
gi|192287323|gb|ACF03704.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 241
Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 36/225 (16%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTIL--LKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ R + + L +G G L L+ + + + + IV+L
Sbjct: 19 RRGGRLRATIVAVLALGFLVGAGGFVVFLSQLRGAEQK---------PRHNADGIVVLTG 69
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G+ SR+ + + L + + + + + +
Sbjct: 70 GS------------------SRVSDAVELLAAGYGKRLLISGVHRTNGARDISRSVPESR 111
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ V+ D ++DT NA + ++ +++I+V+S YH+ R+ H
Sbjct: 112 DWF--SCCVDLDR-----SAVDTRSNASETRRWVQERGFRSLIVVTSNYHMPRAIAEMSH 164
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + + P + L L EY L R
Sbjct: 165 AMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELR 209
>gi|187731370|ref|YP_001881843.1| putative SanA protein [Shigella boydii CDC 3083-94]
gi|187428362|gb|ACD07636.1| putative SanA protein [Shigella boydii CDC 3083-94]
Length = 227
Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 64/223 (28%), Gaps = 32/223 (14%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
LL + +LL I ++ + ++ ++ +++
Sbjct: 5 LLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLLLGAR 64
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + RI LY + K ++ GD + E+
Sbjct: 65 PG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASG 105
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV I + T + + + ++S +H +R+ +
Sbjct: 106 MQKALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAK 162
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ I+ + LN + L+E + + A
Sbjct: 163 QYSIDAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 195
>gi|225869812|ref|YP_002745759.1| membrane protein [Streptococcus equi subsp. equi 4047]
gi|225699216|emb|CAW92492.1| putative membrane protein [Streptococcus equi subsp. equi 4047]
Length = 327
Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 100/261 (38%), Gaps = 57/261 (21%)
Query: 3 LSWIFLIVSYWHLLCQ---SIRKIFFMSCFMLLFSFIGWGIIPTILL------KHLQFSY 53
+ +FL + L+ + S R + + +LLF I +LL K L+ Y
Sbjct: 64 ILLLFLSFNGIRLIKREGLSFRNLLLIGSAVLLFVH---PFISRLLLESIGDSKLLRIMY 120
Query: 54 QRPLLSPQ--------------------WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ L K + I++LG+G P +
Sbjct: 121 ETSDLLILYLLLIVSVYTISSMLNTFYFRKTKEDYIIVLGSGLNGDQVTPLL-------- 172
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
SRI + +++Y+ +I+SGG +AE ++ G++ +DI +E Q
Sbjct: 173 ASRINKGIQIYQKNP----GSKLIMSGGKGADELIAEGEAMCRYAIQQGIKSEDILVENQ 228
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
S +T +N S +I + G + LV++ YHL R+ L + + + +
Sbjct: 229 SRNTRENILLSKQLIPS--GASFCLVTNRYHLFRALLLAKELALPCRCYGA--------- 277
Query: 214 IPLSANFYLTELALKEYIGIL 234
+ ++ ++E +G L
Sbjct: 278 --KTKLYFSMNAFIREIVGYL 296
>gi|307254226|ref|ZP_07536069.1| hypothetical protein appser9_4770 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306862816|gb|EFM94767.1| hypothetical protein appser9_4770 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
Length = 193
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 26/180 (14%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
V+LG P + + R+ ++L K
Sbjct: 19 NIYTDINKLPKHQNAVVLGTSKFYAKGTPNLYYKY------RLEAAVQLINKGK-----V 67
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
++ GD + E V N L + G+ ++ I+ + T + +S + K +
Sbjct: 68 KTLLVSGDNKTPYYNEPKVMLNDLYKMGIPKNIIEQDFAGYRTLDSIVRASKVYK---LE 124
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I+VS +H +R+ ++ IN + Y + + L+E++ +
Sbjct: 125 PFIIVSQQFHCERALFIAKYHNINAVCFAAKYPEGHIKVR------------LREFLARI 172
>gi|62181739|ref|YP_218156.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62129372|gb|AAX67075.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322716225|gb|EFZ07796.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 230
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 34/227 (14%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ LC R+ ++CF+L+ + + L+ + + ++ +++
Sbjct: 8 FIRRLCF-TRRALTVACFLLVAAAVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLG 65
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD K E
Sbjct: 66 AKPG--------------NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEP 106
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + + ++S A+H +R+
Sbjct: 107 SAIQQALIAKGVPEAAIFCDYAGFSTLDSVVRARKVFGENRIT---IISQAFHNQRAIWL 163
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q +GI+ + LN + T L+E + + A
Sbjct: 164 AQQYGIDAIGVNAPDLNKRHG----------TYTRLREKLARVSAVL 200
>gi|113461220|ref|YP_719289.1| SanA protein [Haemophilus somnus 129PT]
gi|112823263|gb|ABI25352.1| SanA protein [Haemophilus somnus 129PT]
Length = 231
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 69/203 (33%), Gaps = 17/203 (8%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+S+ + ++++ +F+F II + ++Q +
Sbjct: 8 LSFPQWIITLVKRLLHYGFAFSIFTFFSLIIIDRSIAWYVQDR---IYTKIEELPYRPYG 64
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG P + +R+ T+ L+K K + + GD +
Sbjct: 65 IVLGTAKYFSKNNPNLYYN------NRLTATVELFKQEKIDYLLLS-----GDNRTMQYN 113
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E I L + + D + ++ T + + + K + +++ +H +R+
Sbjct: 114 EPITMFKDLRKMDIPEDVMYMDFAGFRTLDSVIRADKVFKAQP---MTIITQQFHCERAL 170
Query: 190 LYFQHFGINTKASCSDYLNAYYS 212
+ + I+ + Y S
Sbjct: 171 FIAKFYDIDAICFAAKSPANYLS 193
>gi|319781280|ref|YP_004140756.1| hypothetical protein Mesci_1548 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167168|gb|ADV10706.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 241
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 72/229 (31%), Gaps = 40/229 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L ++R + G+G + L +P + I++L
Sbjct: 30 RLRATLRLSALSVLILATLFAGGFGWFANKVSH---------LTTPANPARADAIIVLTG 80
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ M L S K + + + + L +
Sbjct: 81 G------------------QSRLDAAMDLLASGKGERLLISGVHPSA--SRRQLQAATGG 120
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ L V+ D +LDT NA+ S+ +++ +ILV++ YH+ RS L
Sbjct: 121 DKNLFSCCVDIDR-----AALDTIGNAEESAKWVESHAYGTVILVTNNYHMPRSLLEMGR 175
Query: 195 --FGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G + + + + EY L+A RG
Sbjct: 176 LLHGAKLEPYPVVNSNLDNGGWLTKPRAL---RVLFTEYNKYLLALARG 221
>gi|207858479|ref|YP_002245130.1| hypothetical protein SEN3064 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|206710282|emb|CAR34640.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 230
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 34/227 (14%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ LC R+ ++CF+L+ + + L+ + + ++ +++
Sbjct: 8 FIRRLCF-TRRALTVACFLLVAAGVALFY-SNWLIVNASQHLTWNGIQTVPARNVGLVLG 65
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD K E
Sbjct: 66 AKPG--------------NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEP 106
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + + ++S A+H +R+
Sbjct: 107 SAMQQALIAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWL 163
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q +GI+ + LN + T L+E + + A
Sbjct: 164 AQQYGIDAIGVNAPDLNKRHG----------TYTRLREKLARVSAVL 200
>gi|307130739|ref|YP_003882755.1| hypothetical protein Dda3937_03495 [Dickeya dadantii 3937]
gi|306528268|gb|ADM98198.1| predicted protein [Dickeya dadantii 3937]
Length = 251
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/216 (13%), Positives = 63/216 (29%), Gaps = 23/216 (10%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R IF + +L+ + + + I + + Q + V+LG
Sbjct: 2 WKRLIFGLFTAILVMACGAFLLDRCISWR----TAPYIYEDVQDLPPRQVGVVLGTAKYY 57
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ RI + Y S K + + GD + E + L
Sbjct: 58 RA------GVINQYYLFRIQGALNAYNSGKVSYLLLS-----GDNAQQSYNEPMTMRRDL 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ +GV +I L+ T + + + +++ +H +R+ H GI
Sbjct: 107 IAAGVPPTNIVLDYAGFRTLDSIVRTRKVFDTNDFT---IITQRFHCERALFIALHKGIQ 163
Query: 199 TKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
+ + + + +E
Sbjct: 164 AQCFAVPSPKDIWQVRLREFGARLGTLFDLYILKRE 199
>gi|255523534|ref|ZP_05390502.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296186506|ref|ZP_06854909.1| SanA family protein [Clostridium carboxidivorans P7]
gi|255512791|gb|EET89063.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296048953|gb|EFG88384.1| SanA family protein [Clostridium carboxidivorans P7]
Length = 231
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 25/188 (13%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ ++ I++ G S R+ + +YK
Sbjct: 41 NKANKYIVDKHSVPRVECIIIPGAYVYPD-------GRLSDILKDRVDTALEIYKENSNL 93
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
I+ GD E L + G++ I L+ T+++ + + K
Sbjct: 94 K-----ILVTGDHGNLQYDEVNNMRKYLEQRGIKSSSIFLDHAGFSTYESIYRAKHIFKV 148
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
++V+ YHLKR+ + GI +D + + L+E
Sbjct: 149 NS---AVIVTQDYHLKRAVYSAKGMGIECYGVKADKHI----------YVDIVKYKLRES 195
Query: 231 IGILIAYY 238
+ I +
Sbjct: 196 LAIYKDFI 203
>gi|191166833|ref|ZP_03028658.1| putative SanA protein [Escherichia coli B7A]
gi|193062133|ref|ZP_03043229.1| putative SanA protein [Escherichia coli E22]
gi|194427757|ref|ZP_03060304.1| putative SanA protein [Escherichia coli B171]
gi|209920557|ref|YP_002294641.1| hypothetical protein ECSE_3366 [Escherichia coli SE11]
gi|218696790|ref|YP_002404457.1| putative thioredoxin-like [Escherichia coli 55989]
gi|260845898|ref|YP_003223676.1| putative thioredoxin-like protein [Escherichia coli O103:H2 str.
12009]
gi|190903075|gb|EDV62799.1| putative SanA protein [Escherichia coli B7A]
gi|192932353|gb|EDV84951.1| putative SanA protein [Escherichia coli E22]
gi|194414265|gb|EDX30540.1| putative SanA protein [Escherichia coli B171]
gi|209913816|dbj|BAG78890.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218353522|emb|CAU99654.1| putative thioredoxin-like [Escherichia coli 55989]
gi|257761045|dbj|BAI32542.1| predicted thioredoxin-like protein [Escherichia coli O103:H2 str.
12009]
gi|323946845|gb|EGB42863.1| hypothetical protein EREG_01643 [Escherichia coli H120]
gi|324018193|gb|EGB87412.1| hypothetical protein HMPREF9542_03119 [Escherichia coli MS 117-3]
gi|324119692|gb|EGC13573.1| hypothetical protein ERBG_00478 [Escherichia coli E1167]
Length = 227
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 67/225 (29%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ +++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASKQLTWSDVNAVPERNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + ++S +H +R+
Sbjct: 104 SGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + I+ + LN + L+E + + A
Sbjct: 161 AKQYSIDAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 195
>gi|116254067|ref|YP_769905.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258715|emb|CAK09820.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 236
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 76/232 (32%), Gaps = 48/232 (20%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +R F + F G+ L P + + IV+L G
Sbjct: 28 IRRLLRWGGFACLLAIALVFGGFLRFAD----------SVTTLKPPTEPKADAIVVLTGG 77
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
Y RI + + L + + + G A+
Sbjct: 78 ------------------YQRIDQAVELLQKGAGKRLLIS-----GAHPTTTPAQIRKMT 114
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR--SQLYFQ 193
+ DI ++DT NA+ +S+ I +++++V++ YH+ R ++L +
Sbjct: 115 QGSADLFSCCVDI--GYDAIDTIGNAEEASNWIHAKGYRSVLIVTNNYHMPRSLAELSYV 172
Query: 194 HFGINTKASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
I A D + + P + + L EY+ +L G R
Sbjct: 173 DPDIEFIAYPVVNSDLKSRNWFTDPNA-----MRVMLAEYVKVL---LTGAR 216
>gi|323979003|gb|EGB74082.1| hypothetical protein ERFG_00182 [Escherichia coli TW10509]
Length = 230
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 70 NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 124
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 125 CDYAGFSTLDSVVRAKKVFGESHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 181
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 182 KHGFYTQ----------LREKLARVSA 198
>gi|269959273|ref|ZP_06173657.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835975|gb|EEZ90050.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 365
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D IV LG ++ I + R+ T+ + K+ +I+ G
Sbjct: 188 KLDDKGAIVTLGYALNPDGSMHQILV-------ERLETTLAMAKANPDA-----LIVLTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+E G+ +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL ++ E +GI R
Sbjct: 296 ASHVRRGQTLFEIASWQTGPQGITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 350
>gi|260590748|ref|ZP_05856206.1| SanA protein [Prevotella veroralis F0319]
gi|260537234|gb|EEX19851.1| SanA protein [Prevotella veroralis F0319]
Length = 197
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 76/215 (35%), Gaps = 26/215 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
++ + LL + I++ + + R +P +LLG
Sbjct: 2 KRKVIYTVTALLVIVVAIIATCNIIVNN--NAKGRVFDNPAEVPAMKTAILLGTS----- 54
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P+ +RI + LYK+ K + + ++ G E L+
Sbjct: 55 PKSRYSEGPNLFFQARINAAVELYKNHKYKQLIISG------EKRKGYDEPSAMKKNLIV 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ + I ++ TF + + + + +II++S +H +RS H GI
Sbjct: 109 RGIPANIIHMDGSGHRTFLSMRN---IQEEYHADSIIIISQKWHNQRSIYLADHLGIYAV 165
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ ++ +++ + ++E + +
Sbjct: 166 GYNAEDVHDFFAQLTH----------IRELLARVK 190
>gi|120403947|ref|YP_953776.1| hypothetical protein Mvan_2964 [Mycobacterium vanbaalenii PYR-1]
gi|119956765|gb|ABM13770.1| protein of unknown function DUF218 [Mycobacterium vanbaalenii
PYR-1]
Length = 233
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G ++R+ M + Q II G ++G
Sbjct: 84 AIVILGYGLKPD-------GTMRLILHTRVLAGMAVGHMFPQSP-----IIVTGGNPRNG 131
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ N L G+ + I +E ++ T QNA FS + K IILV+S+ H R
Sbjct: 132 KTEARQMRNMLRLYGIPDERIIVEDRANSTVQNAAFSVPLAKQAGTTGIILVTSSSHQDR 191
Query: 188 SQLYFQHFGINTKA 201
+ F G N A
Sbjct: 192 ADGNFADAGGNVLA 205
>gi|46198505|ref|YP_004172.1| hypothetical protein TTC0197 [Thermus thermophilus HB27]
gi|55980534|ref|YP_143831.1| hypothetical protein TTHA0565 [Thermus thermophilus HB8]
gi|46196127|gb|AAS80545.1| hypothetical conserved protein [Thermus thermophilus HB27]
gi|55771947|dbj|BAD70388.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 181
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 16/166 (9%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++ + IV+LG PS R+ + L++ + I ++GG
Sbjct: 19 QETYDWIVVLGAA--------QYGGRPSPALERRLQAALHLFREGRGR----RIAVAGGK 66
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +E V L GV + + ET+S T++N F K ++LV+ A
Sbjct: 67 APEDLYSEGEVGCRYLAARGVPEEALFCETRSRSTYENLLFL----KPHLEGRLLLVTDA 122
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
HL R+ + G+ + + L L+
Sbjct: 123 PHLPRALFLARLLGLEAEGYPVPGNYPLGYWAKEALYRLWLYLGLR 168
>gi|323173666|gb|EFZ59295.1| hypothetical protein ECLT68_1983 [Escherichia coli LT-68]
Length = 230
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 61/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ +C S R + +LL I ++ + ++ ++
Sbjct: 4 AFARFLLRICFSRRTLKI--ACLLLLVAGATIFIADRVMVNASKQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQKALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + + I+ + LN +
Sbjct: 160 AIWLAKQYSIDAIGFNAPDLNMKHGFY 186
>gi|227823233|ref|YP_002827205.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
gi|227342234|gb|ACP26452.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
Length = 242
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 77/222 (34%), Gaps = 35/222 (15%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +R+ FF+ L G+ + L P + IV+L G
Sbjct: 33 KILRRGFFVLLAFLAVFVAGFLYFADTVAS----------LQPPAAPKADAIVVLTGGFQ 82
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
RI + + L KS + + + + + + +
Sbjct: 83 ------------------RIEQAVELLKSGAGNRLLISGVNPA--TTGSQIRRNTQSSAD 122
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L + V+ +++DT NA + I + +++++V++ YH+ RS L +
Sbjct: 123 LFKCCVDI-----GHEAVDTIGNATEAGQWIHDHGYRSVLVVTNNYHMPRSLLELRRVRP 177
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+T+ +N+ N + L EY IA+ R
Sbjct: 178 DTEFIAYPVVNSDLKTSNWLRNPRFIKAILLEYAKYSIAFLR 219
>gi|325499862|gb|EGC97721.1| hypothetical protein ECD227_3959 [Escherichia fergusonii ECD227]
Length = 203
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 48/147 (32%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 43 NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKNYDETSGMQQALIAKGVPAKVIF 97
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 98 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 154
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ + L+E + + A
Sbjct: 155 KHGLYTQ----------LREKLARVSA 171
>gi|319953636|ref|YP_004164903.1| hypothetical protein Celal_2110 [Cellulophaga algicola DSM 14237]
gi|319422296|gb|ADV49405.1| protein of unknown function DUF218 [Cellulophaga algicola DSM
14237]
Length = 211
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 66/214 (30%), Gaps = 26/214 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K F I ++ + ++ S + + ++LG +
Sbjct: 3 KKILKVIAACTVLFFALLFICNYIIDA--STEEQTYTSVEKIPANRVGLILGTAKRLTS- 59
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
P+ +RI T+ LYK+ K ++ GD E L++
Sbjct: 60 -----GHPNPYYTNRIIATVALYKASKIE-----FVLVSGDNGSIYYNEPKAIKKDLVKG 109
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ D I L+ T + + + ++ ++S +H R+ G+
Sbjct: 110 GIPEDKIFLDYAGFRTLDSMMRAKHVFG---LTSVTVISQEFHNDRAIYLAHKKGLKAIG 166
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + ++ L+EY +
Sbjct: 167 FNAKDITGTNGF----------KVQLREYFARVK 190
>gi|301025123|ref|ZP_07188716.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299880175|gb|EFI88386.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 230
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 62/207 (29%), Gaps = 24/207 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+C S R + +LL +I ++ + ++ ++
Sbjct: 4 AFARLLLRICFSRRTLKI--ACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVG 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++ G + RI LY + K ++ GD +
Sbjct: 62 LLLGARPG--------------NRYFTRRIDTVAALYHAGKVKW-----LLVSGDNGRKN 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + + + ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ + +GI+ + LN +
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLNMKHGFY 186
>gi|253990372|ref|YP_003041728.1| hypothetical protein PAU_02897 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781822|emb|CAQ84985.1| sana protein [Photorhabdus asymbiotica]
Length = 258
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 28/217 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S+ K + + I I+ + + + + + ++LG
Sbjct: 11 KSMWKRLIIGLLFITGMLILTAIVLDRWIS--WKTAPYIFDDLKQLPEREVGMVLGT--- 65
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ + P+ RI + Y S K ++ GD + E I
Sbjct: 66 ---SKYYLSGAPNQYYMYRIQGAVNAYNSDK-----IKYLLLSGDNAQQSYNEPITMRRD 117
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ +G+ +I L+ T + + + +++ +H +R+ H GI
Sbjct: 118 LVRAGIPATNIVLDFAGFRTLDSIVRTRKVFDTNDFT---IITQRFHCERALFIAMHMGI 174
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + L+E I L
Sbjct: 175 TAQCYAVSTPK------------NMITVRLREIIARL 199
>gi|229845344|ref|ZP_04465476.1| SanA [Haemophilus influenzae 6P18H1]
gi|229811797|gb|EEP47494.1| SanA [Haemophilus influenzae 6P18H1]
Length = 226
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 68/225 (30%), Gaps = 25/225 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + + F + LL++ I+L L + + + + +
Sbjct: 2 FTAMLVKKLSPKFTVLFRALLYAI-----FALIILCLLVDRGVSFYVRDKIFTNIDELPF 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+ + + +P+ SR+ L + K + + + GD + E
Sbjct: 57 RPCALVLGTSKYTVSGKPNVYYDSRLMAAKSLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVKTFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 169 AQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|268320221|ref|YP_003293877.1| hypothetical protein FI9785_1759 [Lactobacillus johnsonii FI9785]
gi|262398596|emb|CAX67610.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length = 373
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 89/244 (36%), Gaps = 33/244 (13%)
Query: 1 MLLSWIFLIVSYWHL-----LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
+ L +V W L + + + L +F ++ LL + +
Sbjct: 120 LTLIIGLFLVGIWTLNRLGVFHRLPDWLHSLVAGATLIAFYLLFVMYNFLLNLVLYQITP 179
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHC 114
+ N +++LG G + + +RI + +
Sbjct: 180 ------RRYKQNYLIILGAGLIDGKKVSRL-------LGARIDRAIAFSNKQYDKGHKRP 226
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+I+SGG + L+E+ + ++ G + + I LE +S +T+QN +S + + G
Sbjct: 227 KLIMSGGQGKDEDLSEAAAMKDYAVKHGYDPNLILLEDKSTNTYQNMLYSKKVAISDWGN 286
Query: 175 NII---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ ++ YHL R+ LY + + + + ++L ++E+
Sbjct: 287 SKFKAKFFTNNYHLFRAGLYAKMAHLKANGVGA-----------TTRFYFLPNATIREFA 335
Query: 232 GILI 235
G+ I
Sbjct: 336 GVFI 339
>gi|157158500|ref|YP_001464548.1| putative SanA protein [Escherichia coli E24377A]
gi|193067263|ref|ZP_03048231.1| putative SanA protein [Escherichia coli E110019]
gi|300922298|ref|ZP_07138423.1| hypothetical protein HMPREF9548_00564 [Escherichia coli MS 182-1]
gi|301325559|ref|ZP_07219027.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|157080530|gb|ABV20238.1| putative SanA protein [Escherichia coli E24377A]
gi|192959220|gb|EDV89655.1| putative SanA protein [Escherichia coli E110019]
gi|300421360|gb|EFK04671.1| hypothetical protein HMPREF9548_00564 [Escherichia coli MS 182-1]
gi|300847610|gb|EFK75370.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|320201996|gb|EFW76571.1| SanA protein [Escherichia coli EC4100B]
Length = 227
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 67/225 (29%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ +++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASKQLTWSDVNAVPERNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + ++S +H +R+
Sbjct: 104 SGMQKALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + I+ + LN + L+E + + A
Sbjct: 161 AKQYSIDAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 195
>gi|205354136|ref|YP_002227937.1| hypothetical protein SG3118 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205273917|emb|CAR38919.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629256|gb|EGE35599.1| hypothetical protein SG9_3160 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 230
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 24/201 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ LC R+ ++CF+L+ + + L+ + + ++ +++
Sbjct: 8 FIRRLCF-TRRALTVACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLG 65
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD K E
Sbjct: 66 AKPG--------------NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEP 106
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + + ++S A+H +R+
Sbjct: 107 SAMQQALIAKGVPEAAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWL 163
Query: 192 FQHFGINTKASCSDYLNAYYS 212
Q +GI+ + LN +
Sbjct: 164 AQQYGIDAIGVNAPDLNKRHG 184
>gi|323966614|gb|EGB62047.1| hypothetical protein ERJG_02203 [Escherichia coli M863]
gi|327251872|gb|EGE63558.1| hypothetical protein ECSTEC7V_3725 [Escherichia coli STEC_7v]
Length = 230
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 70 NRYFTRRIDTAAELYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 124
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 125 CDYAGFSTLDSVVRAKKVFGESHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 181
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 182 KHGFYTQ----------LREKLARVSA 198
>gi|261410038|ref|YP_003246279.1| hypothetical protein GYMC10_6269 [Paenibacillus sp. Y412MC10]
gi|261286501|gb|ACX68472.1| protein of unknown function DUF218 [Paenibacillus sp. Y412MC10]
Length = 194
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LG + P ++ R+ E + ++ II G
Sbjct: 28 QPGKADALIVLGYVSKDGRIHPLLK--------ERLDEACKQFRQYGHEY-----IIVSG 74
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L+E G+ + E +S +T QN FS +++ Q K+ +++++
Sbjct: 75 GAVGSRRSEAELMKKYLVEKGIPAKRVLKEDKSNNTVQNLIFSKQLMEQYQLKSFVIITN 134
Query: 182 AYHLKRSQLYFQHFGIN 198
+H++R++ GI
Sbjct: 135 LFHVRRTKYIMHRLGIK 151
>gi|118474006|ref|YP_889974.1| hypothetical protein MSMEG_5741 [Mycobacterium smegmatis str. MC2
155]
gi|118175293|gb|ABK76189.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 211
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 16/166 (9%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN----IIVLLGNGTTIIPTIPAIRIEPS 90
IG I L+ + + IV+LG G T+ I
Sbjct: 25 LIGTVAIAMALICGALVQQTPVASAAPPVAAKDFTKPAIVILGYGLKPDGTMRQILYH-- 82
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R + + ++ Q +I++GG+PQ+ G+ E+ N LL G + I +
Sbjct: 83 -----RTLTGLVIAQAFPQS----PVIVTGGNPQR-GVTEAAAMRNLLLMLGFPANRIIV 132
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
E ++ T QNAQFS + K IILV+S+ H R+ F G
Sbjct: 133 EDRANSTVQNAQFSVPLAKKAGTTGIILVTSSSHQGRADQNFADAG 178
>gi|315652504|ref|ZP_07905488.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485220|gb|EFU75618.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 268
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/260 (13%), Positives = 91/260 (35%), Gaps = 53/260 (20%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+++F + + R + + + +G I ++ +Q S P +
Sbjct: 34 FAFVFFAMGKLIKFYLNKRIPLWSVVSVYTLATLGILIF---IITSIQISLSLPK---ED 87
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +++LG + + R+ + + + TII+ G
Sbjct: 88 EPGLDFLIILGTKPDLEKKGSECKY--------RLDKAIEYIDNNPD-----TIIVISGG 134
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---------- 172
+ ES+ + L+++G+++++I +E QS +T QN +S ++I
Sbjct: 135 IGRDKKIESMEMADYLIKNGIDKNNILVEIQSHNTRQNLIYSKALIDRYNSDIKRRTDIT 194
Query: 173 --------------GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+ I ++++ +H+ RS L + G + + +
Sbjct: 195 IVNDMGPVLEVEDKPQTIGILTNDFHIFRSMLIAKRVGYT-QVYPISARSNRVLYL---- 249
Query: 219 NFYLTELALKEYIGILIAYY 238
+ ++E I +
Sbjct: 250 -----HMLVRETFAIFKYKF 264
>gi|153838447|ref|ZP_01991114.1| transporter [Vibrio parahaemolyticus AQ3810]
gi|149748167|gb|EDM59026.1| transporter [Vibrio parahaemolyticus AQ3810]
Length = 365
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 67/178 (37%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV LG ++ I + R+ T+ + K+ III G
Sbjct: 188 KLDNKGAIVTLGYALNPDGSMHQILV-------ERLETTLAMAKANPDA-----IIILTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+ GV +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLIGKGVSKDRIIEENYATSTVGNALFSSYALARHYIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL +E E +GI R
Sbjct: 296 ASHVRRGQTLFEIASWQTGPQGITFDTVSYPDKPLKDLAKASES---ELLGIYRDALR 350
>gi|251792634|ref|YP_003007360.1| PurR protein [Aggregatibacter aphrophilus NJ8700]
gi|247534027|gb|ACS97273.1| PurR protein [Aggregatibacter aphrophilus NJ8700]
Length = 237
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 72/219 (32%), Gaps = 33/219 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ +++R + F I I + K + + ++ P G
Sbjct: 18 IKRAVRYLAIFVAFFAFLLIILDQTIGYYVRKDIYYDIEKIPNRP-------------YG 64
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ + + Y+R+ RL+++ K + + GD + E
Sbjct: 65 LVLGTSKYFANNTLNLFYYNRLLAAQRLFEAKKVDYLLLS-----GDNRTLQYNEPRTML 119
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L + GV ++ I L+ T + + + K ++S +H +R+ +
Sbjct: 120 KDLKKMGVPQEFIYLDFAGFRTLDSVIRADQVFKAHSLT---IISQKFHCERALFIAKFH 176
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I+ +DY P +F ++E+ L
Sbjct: 177 NIDAICFVADY--------PQVYSFVR----VREFFARL 203
>gi|293412464|ref|ZP_06655187.1| conserved hypothetical protein [Escherichia coli B354]
gi|291469235|gb|EFF11726.1| conserved hypothetical protein [Escherichia coli B354]
Length = 230
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 70 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 124
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + +GI+ + LN
Sbjct: 125 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 181
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 182 KHGFYTQ----------LREKLARVSA 198
>gi|261867930|ref|YP_003255852.1| PurR protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|293390202|ref|ZP_06634536.1| PurR protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|261413262|gb|ACX82633.1| PurR protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|290950736|gb|EFE00855.1| PurR protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 237
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 20/200 (10%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
+ LL + + D + + G + + + Y
Sbjct: 24 YFALFFAGFALLLIVVDQIIGYYVRKDIYYDIDKVPNRPYGLVLGTSKYFSNNTLNLFYY 83
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+R+ RL+++ K + + GD + E L + GV ++ I L+
Sbjct: 84 NRLLAAQRLFEARKVDYLLLS-----GDNRTLQYNEPRTMLQDLKKMGVPQEFIYLDFAG 138
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T + + + K ++S +H +R+ + I+ +DY
Sbjct: 139 FRTLDSVIRADQVFKAHSLT---IISQKFHCERALFIAKFHNIDAICFAADY-------- 187
Query: 215 PLSANFYLTELALKEYIGIL 234
P +F ++E+ L
Sbjct: 188 PQVYSFVR----VREFFARL 203
>gi|260900089|ref|ZP_05908484.1| transporter [Vibrio parahaemolyticus AQ4037]
gi|308110058|gb|EFO47598.1| transporter [Vibrio parahaemolyticus AQ4037]
Length = 365
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 67/178 (37%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV LG ++ I + R+ T+ + K+ III G
Sbjct: 188 KLDNKGAIVTLGYALNPDGSMHQILV-------ERLETTLAMAKANPDA-----IIILTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+ GV +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLIGKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL +E E +GI R
Sbjct: 296 ASHVRRGQTLFEIASWQTGPQGITFDTVSYPDKPLKDLAKASES---ELLGIYRDALR 350
>gi|28901535|ref|NP_801190.1| hypothetical protein VPA1680 [Vibrio parahaemolyticus RIMD 2210633]
gi|260363086|ref|ZP_05775955.1| transporter [Vibrio parahaemolyticus K5030]
gi|260880373|ref|ZP_05892728.1| transporter [Vibrio parahaemolyticus AN-5034]
gi|260894740|ref|ZP_05903236.1| transporter [Vibrio parahaemolyticus Peru-466]
gi|28810082|dbj|BAC63023.1| putative exported protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308089437|gb|EFO39132.1| transporter [Vibrio parahaemolyticus Peru-466]
gi|308092057|gb|EFO41752.1| transporter [Vibrio parahaemolyticus AN-5034]
gi|308112354|gb|EFO49894.1| transporter [Vibrio parahaemolyticus K5030]
Length = 365
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 67/178 (37%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV LG ++ I + R+ T+ + K+ III G
Sbjct: 188 KLDNKGAIVTLGYALNPDGSMHQILV-------ERLETTLAMAKANPDA-----IIILTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+ GV +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLIGKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL +E E +GI R
Sbjct: 296 ASHVRRGQTLFEIASWQTGPQGITFDTVSYPDKPLKDLAKASES---ELLGIYRDALR 350
>gi|163801450|ref|ZP_02195349.1| hypothetical protein 1103602000598_AND4_11294 [Vibrio sp. AND4]
gi|159174939|gb|EDP59739.1| hypothetical protein AND4_11294 [Vibrio sp. AND4]
Length = 365
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 64/178 (35%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ I+ LG R+ T+ + ++ +I+ G
Sbjct: 188 KLDNKGAIITLGYALNPD-------GSMHPILIERLETTLAMAQANPDA-----LIVLTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+E G+ +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL ++ E +GI R
Sbjct: 296 ASHVRRGQTLFEVASWQTGPQGITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 350
>gi|309793653|ref|ZP_07688079.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|308122610|gb|EFO59872.1| conserved hypothetical protein [Escherichia coli MS 145-7]
Length = 227
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 68/225 (30%), Gaps = 34/225 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+C S R + +LL I ++ + ++ +++ +++
Sbjct: 5 LLLRICFSRRTLKIGC--LLLLIAGATIFIADRVMVNASKQLTWSDVNAVPERNVGLLLG 62
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G + RI LY + K ++ GD + E+
Sbjct: 63 ARPG--------------NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEA 103
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ GV I + T + + + ++S +H +R+
Sbjct: 104 SGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWL 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + I+T + LN + L+E + + A
Sbjct: 161 AKQYSIDTIGFNAPDLNMKHGFYTQ----------LREKLARVSA 195
>gi|322832144|ref|YP_004212171.1| hypothetical protein Rahaq_1421 [Rahnella sp. Y9602]
gi|321167345|gb|ADW73044.1| protein of unknown function DUF218 [Rahnella sp. Y9602]
Length = 307
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 60/215 (27%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
I+++ +++ + + Q Q + V+LG
Sbjct: 2 IKRLIAGVFGIIILMLAVAIGLDQWISLRTQ---PYIYDEVQTLPHRQVGVVLGTA---- 54
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + GD + E L+
Sbjct: 55 --KYYRTGVINQYYLYRIQGAINAYNSGKVKYLLLS-----GDNAQQSYNEPSTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+G+ DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 AAGIPASDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ P N +E L
Sbjct: 165 QCFAV----------PSPKNMLSVRS--REIFARL 187
>gi|228474759|ref|ZP_04059490.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|228271422|gb|EEK12790.1| conserved hypothetical protein [Staphylococcus hominis SK119]
Length = 185
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S + + + ++LG + ++ R+ ++ K+ + II+
Sbjct: 21 STDFNNNHHAYIVLGTSLSKD-------GTLKRETIKRLATCLKA----KKQNEKAYIIV 69
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG +G ++ L++ V+ DI E S DT +NA + + ++ L
Sbjct: 70 SGGR-PVNGNTQANEMKKWLIQHCVKEKDIITEQNSSDTIENAIETLKIADKRGFNSLSL 128
Query: 179 VSSAYHLKRSQLYFQHF--GINT--KASCSDYLNAYYSI 213
++S H++R+ L F+ I D ++ +S
Sbjct: 129 ITSGDHVRRATLIFEKLDKNIKVNEIIIPKDEVDTKFSY 167
>gi|145636873|ref|ZP_01792538.1| SanA [Haemophilus influenzae PittHH]
gi|145269954|gb|EDK09892.1| SanA [Haemophilus influenzae PittHH]
Length = 226
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 65/225 (28%), Gaps = 25/225 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + F L ++ I+L L + + + + +
Sbjct: 2 FTAMLVKKFSPKFTALFRALFYAI-----FALIILCLLVDRGVSFYVRDKIFTNIDELPF 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+ + + +P+ SR+ L + K + + + GD + E
Sbjct: 57 RPCALVLGTSKYTVSGKPNVYYDSRLMAAKSLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVQTFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 169 AQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|213865184|ref|ZP_03387303.1| hypothetical protein SentesT_35716 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 169
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 18/149 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD K E L+ GV I
Sbjct: 9 NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIF 63
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + + ++S A+H +R+ Q +GI+ + LN
Sbjct: 64 CDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWLAQQYGIDAIGVNAPDLNK 120
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYY 238
+ T L+E + + A
Sbjct: 121 RHG----------TYTRLREKLARVSAVL 139
>gi|38234275|ref|NP_940042.1| hypothetical protein DIP1704 [Corynebacterium diphtheriae NCTC
13129]
gi|38200538|emb|CAE50233.1| Putative secreted protein [Corynebacterium diphtheriae]
Length = 225
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 22/177 (12%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+K IV+LG PS Q +R+ + + + ++
Sbjct: 30 PKNSRKRFPTIVVLGTA--------QYDGVPSRQFAARLKWAAEQWHTQRSQ----KVVT 77
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GG + E+ V L++ V+ D I Q DT + + + S ++ I++
Sbjct: 78 VGGKLPEDRFTEAAVAREYLIKEHVDSDLIVAVEQGHDTRGSLRAALSELEQ----PILI 133
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ H R++L + GI AS + Y + + + E G+ +
Sbjct: 134 ITDPNHSLRAELIARSEGIAAWASSTPYCPTTFP------RWQWWWTFVHEQGGLCV 184
>gi|91975425|ref|YP_568084.1| hypothetical protein RPD_0945 [Rhodopseudomonas palustris BisB5]
gi|91681881|gb|ABE38183.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 241
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 72/227 (31%), Gaps = 33/227 (14%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ + L F+ L L+ + +P + + IV+L G+
Sbjct: 19 RRPGRLRAVIVATLALGFVATAAGFVAFLAQLRGAELKPN------RTADGIVVLTGGS- 71
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
SR+ + + L S + + + + +
Sbjct: 72 -----------------SRVSDAVELLASGYGKRLLISGVHRTNGASDISRSVPDSKDWL 114
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ V+ D +++T NA + ++I+V+S YH+ R+ + H
Sbjct: 115 --DCCVDLDR-----SAVNTRSNAAETRRWAHERGFHSLIVVTSNYHMPRAIVEMSHAMP 167
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI--AYYRGNR 242
+ + + + P + L L EY + A R R
Sbjct: 168 DVELIPFAVIGDKWRDEPWWTSGATLRLLLSEYAKYVAVEARVRLAR 214
>gi|307263104|ref|ZP_07544726.1| hypothetical protein appser13_5270 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306871730|gb|EFN03452.1| hypothetical protein appser13_5270 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 196
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 28/199 (14%)
Query: 38 WGIIPTILLKHLQFSYQR--PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ I ++ + Y + + V+LG P + +
Sbjct: 3 FLSIAIFIIDYATGIYVKDNIYTDIEKLPKHRNAVVLGTSKFYAKGTPNLYYKY------ 56
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ ++L K ++ GD + E V N L G+ ++ I+ +
Sbjct: 57 RLEAAVQLINKGKAKK-----LLVSGDNKTPYYNEPKVMLNDLYNMGIPKNMIEQDFAGY 111
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + +S + K + I+VS +H +R+ ++ IN + Y + +
Sbjct: 112 RTLDSIVRASKVYK---LEPFIIVSQQFHCERALFIAKYHNINAVCFTAKYPEGHIKVR- 167
Query: 216 LSANFYLTELALKEYIGIL 234
L+E++ +
Sbjct: 168 -----------LREFLARI 175
>gi|213419370|ref|ZP_03352436.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 249
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 33/213 (15%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+CF+L+ + + L+ + + ++ +++ G
Sbjct: 1 MACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLGAKPG---------- 49
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+ RI LY + K ++ GD K E L+ GV
Sbjct: 50 ----NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEPSAMQQALIAKGVPE 100
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I + T + + + + ++S A+H +R+ Q +GI+ +
Sbjct: 101 AAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWLAQQYGIDAIGVNAP 157
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
LN + T L+E + + A
Sbjct: 158 DLNKRHG----------TYTRLREKLARVSAVL 180
>gi|145223836|ref|YP_001134514.1| hypothetical protein Mflv_3249 [Mycobacterium gilvum PYR-GCK]
gi|145216322|gb|ABP45726.1| protein of unknown function DUF218 [Mycobacterium gilvum PYR-GCK]
Length = 202
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G ++R+ + + + Q II++GG+ ++G
Sbjct: 53 AIVILGYGLKPD-------GTMRLILHTRVLAGLAVAQMFPQ----APIIVTGGN-PRNG 100
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L G R+ I LE ++ T QNA FS + + IILV+S+ H R
Sbjct: 101 NTEAEQMGKMLRLYGTPRERIILEERANSTVQNAAFSVPLAEQAGASGIILVTSSSHQDR 160
Query: 188 SQLYFQHFGINTKA 201
+ F G N A
Sbjct: 161 ADGIFADAGGNVLA 174
>gi|305665201|ref|YP_003861488.1| putative transport-related membrane protein [Maribacter sp.
HTCC2170]
gi|88709954|gb|EAR02186.1| putative transport-related membrane protein [Maribacter sp.
HTCC2170]
Length = 217
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 18/161 (11%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + +P+ +RI T+ L+ S K ++ GD E
Sbjct: 54 GLVLGTSKKIATGQPNPYYSNRIKATVELFMSNKID-----FVLVSGDNGSIYYNEPTTI 108
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ + I L+ T + ++ + ++ ++S +H +R+
Sbjct: 109 KKDLVAKGIPEEKIFLDYAGFRTLDSMVRANVVFG---LDSVTVISQKFHNERAIYIANK 165
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
G+N + + ++ +EY +
Sbjct: 166 KGLNAIGYNAQDIKGQQGF----------KVQFREYFARVK 196
>gi|329123313|ref|ZP_08251879.1| membrane protein SanA [Haemophilus aegyptius ATCC 11116]
gi|327471409|gb|EGF16859.1| membrane protein SanA [Haemophilus aegyptius ATCC 11116]
Length = 226
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 67/225 (29%), Gaps = 25/225 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + + F LL++ I+L L + + + + +
Sbjct: 2 FTAMLVKKLSPKFTALFRALLYAI-----FALIILCLLVDRGVSFYVRDKIFTNIDELPF 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+ + + +P+ SR+ L + K + + + GD + E
Sbjct: 57 RPCALVLGTSKYTVSGKPNVYYDSRLMAAKSLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVQAFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 169 AQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|167758901|ref|ZP_02431028.1| hypothetical protein CLOSCI_01247 [Clostridium scindens ATCC 35704]
gi|167663641|gb|EDS07771.1| hypothetical protein CLOSCI_01247 [Clostridium scindens ATCC 35704]
Length = 235
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 82/246 (33%), Gaps = 41/246 (16%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSF---------------IGWGIIPTILLKHLQFS 52
++ S F+++ + L+ + + ++ L+
Sbjct: 14 AVLCVALKKWDSTFSRFWLAAGLGLWLYDYAAVRLGMEAAARKALLLPVAVFVVTELR-- 71
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ P+ +K+ + +++LG ++ Y R+ + + K+
Sbjct: 72 -IVMGMVPRGQKEYDYLIILGAHVEGRKITDSL--------YRRLNKALIYLKAHPGTRA 122
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG + E+ + L+ G+ I E S T +N +FS + N
Sbjct: 123 ----VVSGGQGTGEDVTEAQAMEDYLIAQGIASYRIIKEEASTTTQENLKFSKRYM-NCG 177
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++ +VS+ +HL R+ Y + G + L ++E
Sbjct: 178 EADVGIVSNNFHLYRACAYARRLGYGH-PYP---------LAASCHPALLVNYMVRECFA 227
Query: 233 ILIAYY 238
+ +
Sbjct: 228 VWKMWL 233
>gi|260777035|ref|ZP_05885929.1| hypothetical protein VIC_002425 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606701|gb|EEX32975.1| hypothetical protein VIC_002425 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 365
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D IV LG ++ I I+ R+ T+ + K+ +I+ G
Sbjct: 188 KLDDKGAIVTLGYALNPDGSMHEILIQ-------RLETTLAMAKANPDA-----LIVLTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+ GV +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLISKGVSKDRIIEENYATSTVGNALFSSYALARHGIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL ++ E +GI R
Sbjct: 296 ASHVRRGQTLFEVASWQTGPQGITFDTVGYPDKPLKELAKASDS---ELLGIYRDALR 350
>gi|312138245|ref|YP_004005581.1| integral membrane protein [Rhodococcus equi 103S]
gi|325674847|ref|ZP_08154534.1| hypothetical protein HMPREF0724_12316 [Rhodococcus equi ATCC 33707]
gi|311887584|emb|CBH46896.1| putative integral membrane protein [Rhodococcus equi 103S]
gi|325554433|gb|EGD24108.1| hypothetical protein HMPREF0724_12316 [Rhodococcus equi ATCC 33707]
Length = 220
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 12/140 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
IV+LG G SR+ + L + + II G
Sbjct: 87 PLTTNIVVLGAGLYAD-------GTMRPLLVSRLQAALALAQRFP-----LSPIIVTGGV 134
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ G+ E+ L+ +G+ I E S T +NA ++ ++ ++V+S
Sbjct: 135 PQSGVTEAQAMRQWLVANGIPAFRITEENTSRSTVENAVNTNRILAGRAASGAVVVTSPD 194
Query: 184 HLKRSQLYFQHFGINTKASC 203
HL+R+ + F+
Sbjct: 195 HLQRAMVDFRVAVAGRIPIA 214
>gi|288802314|ref|ZP_06407754.1| SanA protein [Prevotella melaninogenica D18]
gi|288335281|gb|EFC73716.1| SanA protein [Prevotella melaninogenica D18]
Length = 211
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 19/158 (12%)
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +RI T+ LYK K + + ++ G E + L+
Sbjct: 61 PKARGGKRPSSFYMARIKATVELYKHGKFKQLIISG------DKREGYDEPQTMRHDLIV 114
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I ++ Q T + + + ++ ++I++S +H +RS I
Sbjct: 115 RGVPDSIITMDGQGYRTLLSMRN---IKQHFGVNDMIIISQKWHNERSIFLADKMNIKAV 171
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+D + +I ++E + + +
Sbjct: 172 GYNADDVRHPRAIWTH----------IRELLARVKLFI 199
>gi|67924001|ref|ZP_00517453.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
gi|67854141|gb|EAM49448.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
Length = 237
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 41/194 (21%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
L + +K F + L+ +L++ L + I++L
Sbjct: 19 ARLTKRKWKKRFKLLFLALIGFIFSSLAF-NVLVR----------LPINTNHTVDGILVL 67
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G R ++ ++ II+S G ++
Sbjct: 68 GGSIR------------------REIYAAQIASDYQE----VPIIVSQG-------SKPP 98
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
D++ +E + TF N F +++ + + +++S HL R+QL
Sbjct: 99 CIKLIFQREQTPMDNVWVEQCAYSTFDNFFFCVPLLQKHRVHKVKVITSQSHLPRAQLLA 158
Query: 193 Q-HFGINTKASCSD 205
Q HFG A D
Sbjct: 159 QIHFGAKGIAVEVD 172
>gi|317048843|ref|YP_004116491.1| hypothetical protein Pat9b_2635 [Pantoea sp. At-9b]
gi|316950460|gb|ADU69935.1| protein of unknown function DUF218 [Pantoea sp. At-9b]
Length = 239
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 17/185 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
I++IF F++L + + + + + V+LG
Sbjct: 2 IKRIFIGLLFIILLMMATALGLDRWIS---WKTAPFIYENVAALPHREVGVVLGTA---- 54
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + + GD E + L+
Sbjct: 55 --KYYRTGVINQYYLYRIQGALNAYNSGKVNYLLLS-----GDNALQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
++GV+ DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 KAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHLGIQA 164
Query: 200 KASCS 204
+
Sbjct: 165 QCYAV 169
>gi|307249667|ref|ZP_07531652.1| hypothetical protein appser4_4760 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858300|gb|EFM90371.1| hypothetical protein appser4_4760 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 196
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 66/199 (33%), Gaps = 28/199 (14%)
Query: 38 WGIIPTILLKHLQFSYQR--PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ I ++ + Y + + V+LG + +
Sbjct: 3 FLSIAIFIIDYATGIYVKDNIYTDIEKLPKHRNAVVLGTSKFYAKGTANLYYKY------ 56
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ ++L K ++ GD + E V N L G+ ++ I+ +
Sbjct: 57 RLEAAVQLINKGKAKK-----LLVSGDNKTPYYNEPKVMLNDLYNMGIPKNMIEQDFAGY 111
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + +S + K + I+VS +H +R+ ++ IN + Y + +
Sbjct: 112 RTLDSIVRASKVYK---LEPFIIVSQQFHCERALFIAKYHNINAVCFAAKYPEGHIKVR- 167
Query: 216 LSANFYLTELALKEYIGIL 234
L+E++ +
Sbjct: 168 -----------LREFLARI 175
>gi|197284538|ref|YP_002150410.1| hypothetical protein PMI0641 [Proteus mirabilis HI4320]
gi|227356718|ref|ZP_03841104.1| membrane protein [Proteus mirabilis ATCC 29906]
gi|194682025|emb|CAR41516.1| putative transport protein [Proteus mirabilis HI4320]
gi|227163226|gb|EEI48157.1| membrane protein [Proteus mirabilis ATCC 29906]
Length = 241
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 63/210 (30%), Gaps = 20/210 (9%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ F+ LF + +I + SP +D + + G +
Sbjct: 5 LIYLFLTLFILVAVALIAC-------DRWIGVKTSPYIFEDIDKLPAKKVGMVLGTAKYY 57
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ RI + Y S K + + GD +H E L+++G+
Sbjct: 58 TTGYLNQFYQYRIQGAVNAYNSGKVQYLLLS-----GDNAQHSYNEPNTMRKDLIKAGIP 112
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I ++ T + + + +++ +H +R+ GI+ +
Sbjct: 113 ASRIVMDFAGFRTLDSVVRTKEVFGTDGFT---IITQRFHCERAVFIALEKGIDAQCFAV 169
Query: 205 D-----YLNAYYSIIPLSANFYLTELALKE 229
+ ++ + + +E
Sbjct: 170 ASPKSMFKVRVREVLARAGAVVDLYILKRE 199
>gi|319442862|ref|ZP_07992018.1| hypothetical protein CvarD4_13984 [Corynebacterium variabile DSM
44702]
Length = 341
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 80/226 (35%), Gaps = 24/226 (10%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ F + + + + W ++++L + + + +++LG G
Sbjct: 130 VRFSLVIIGVAALVLWVCAVVSMIRYL--RDVGRGRRRRAPERADAVIVLGAGLVHD--- 184
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLE 140
S R + S +H +I++GG E+ + L
Sbjct: 185 -----RVSDLLACRCDRGAAAWHSVTEHRPARSTPLIVTGGRGDDEPCTEAEAMHRYLAS 239
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV--SSAYHLKRSQLYFQHF--- 195
G R + E + DT +N FS ++K ++ +V +S +H+ R++
Sbjct: 240 RGFPRGAVLEERYATDTTENLHFSLDLLKERGVRDPHVVVCTSDFHVLRTERIVAALEAE 299
Query: 196 -GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G N + L A + A++ L+EY+ + I G
Sbjct: 300 RGDNGVPFSAVVLGAPTPKPAIPASY------LREYVALTIHRIIG 339
>gi|218187877|gb|EEC70304.1| hypothetical protein OsI_01148 [Oryza sativa Indica Group]
Length = 247
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 58/184 (31%), Gaps = 16/184 (8%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
K +S F+++ +G I + + Q + V+LG
Sbjct: 2 WKRLIISLFIIIAVLMGSAIALDRWIS--WKTAPYVYDELQELPHRQVGVVLGTAKYYRT 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ RI + Y S K + + GD + E + L+
Sbjct: 60 GVINQYYRY------RIQGAINAYNSGKVKYLLLS-----GDNAQQSYNEPMTMRRDLIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV DI L+ T + + + I+++ +H +R+ H GI +
Sbjct: 109 AGVAPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHMGIQAQ 165
Query: 201 ASCS 204
Sbjct: 166 CYAV 169
>gi|90426336|ref|YP_534706.1| hypothetical protein RPC_4865 [Rhodopseudomonas palustris BisB18]
gi|90108350|gb|ABD90387.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB18]
Length = 240
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 69/221 (31%), Gaps = 34/221 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
C +R + + ++ L+ + Q ++ + IV+L G
Sbjct: 19 RCSGLRAAIVATLAIGFVGMASGFVVFLSQLRGAE---------IQPGRNADGIVVLTGG 69
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ SR+ + + L + + + + +
Sbjct: 70 S------------------SRVSDAIELLAAGYGRRLLISGVHPTNGANDISRSLPDSQQ 111
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
LL V+ D +++T NA + ++I+V+S YH+ R+ + H
Sbjct: 112 --LLSCCVDLDR-----SAINTRSNAAEARRWAHERGFHSLIVVTSNYHMPRAIVEMSHA 164
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + + + P + L L EY + A
Sbjct: 165 MPDIELIPFAVVGDKWRDDPWWTSGATFRLLLSEYAKYIAA 205
>gi|261251880|ref|ZP_05944454.1| hypothetical protein VIA_001901 [Vibrio orientalis CIP 102891]
gi|260938753|gb|EEX94741.1| hypothetical protein VIA_001901 [Vibrio orientalis CIP 102891]
Length = 365
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D IV LG ++ I + R+ T+++ K +I+ G
Sbjct: 188 KLDDKGAIVTLGYALNPDGSMHQILV-------ERLETTLQMAKDNPDA-----LIVLTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+E G++++ I E + T NA FSS + ++ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLIEKGIKKERIIEENYATSTVGNALFSSYALARHNIQHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL LT+ + E +GI R
Sbjct: 296 ASHVRRGQTLFEIASWQTGPQDITFDTVSYPDKPLK---ELTKASASELLGIYRDALR 350
>gi|30995434|ref|NP_439417.2| SanA [Haemophilus influenzae Rd KW20]
Length = 226
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 67/225 (29%), Gaps = 25/225 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + F LL++ I+L L + + + + +
Sbjct: 2 FTTMLVKKFSPKFTALFRTLLYAI-----FALIILCLLVDRGISFYVRDKIFTNIDELPF 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+ + + +P+ SR+ L + K + + + GD + E
Sbjct: 57 RPCALVLGTSKYTVSGKPNVYYDSRLMAAKSLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + + T + + + + +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVPKTLMFRDFAGFRTLDSVIRADKIFQVKTFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 169 AQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|296138203|ref|YP_003645446.1| hypothetical protein Tpau_0466 [Tsukamurella paurometabola DSM
20162]
gi|296026337|gb|ADG77107.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 183
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 25/176 (14%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
PL SP + + G P R+ +RLY+ K
Sbjct: 19 PLYSPDDAPPAPVAIAFGASVRGG--------RPGSFVEGRLEAALRLYRIGKVQR---- 66
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+ G+ E V L E GV + + + +LDT+ + +
Sbjct: 67 -ILVSGNANGLSGDEIEVMTRWLRERGVPDEALLTDGAALDTYLSCVHAR---DRFGIDR 122
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
++LVS +H +R+ + +H G++ A ++ + + + +EY+
Sbjct: 123 VLLVSQFFHARRAVVLARHLGLDADAVRAEAGCSRRAWV---------RNLAREYL 169
>gi|262195869|ref|YP_003267078.1| hypothetical protein Hoch_2653 [Haliangium ochraceum DSM 14365]
gi|262079216|gb|ACY15185.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 199
Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 66/170 (38%), Gaps = 23/170 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + + IV+LG S R+ + LY+ + T
Sbjct: 30 VPDAIEPADAIVVLGA-------PVLAPGRLSEVGRERVDAAVSLYQRGAGPRLCVTGGG 82
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + +A + +++E Q+ +T +NA+F+++M++ +++ L
Sbjct: 83 PAGRVEADAMAAHARARGL------PEEALRIERQARNTEENARFAAAMLRAEGCRSVWL 136
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
VS +HL R+ ++F+ G+ + + P S F A+K
Sbjct: 137 VSQPFHLARACVWFRRCGLEARPWHA----------PDSVQFREPRRAIK 176
>gi|197286351|ref|YP_002152223.1| hypothetical protein PMI2504 [Proteus mirabilis HI4320]
gi|227357403|ref|ZP_03841758.1| transporter [Proteus mirabilis ATCC 29906]
gi|194683838|emb|CAR44949.1| putative exported protein [Proteus mirabilis HI4320]
gi|227162408|gb|EEI47405.1| transporter [Proteus mirabilis ATCC 29906]
Length = 379
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 12/165 (7%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
L + K N IV LG T+ I R+ +T+ + K
Sbjct: 194 PADLATLNKTKGNNAIVTLGYALNPDGTMNQI-------LIDRLNKTLEVAKQLPDAM-- 244
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I+ G K E + + L++ G+ + I + + T +NA FS + +
Sbjct: 245 ---IVVTGGVPKAHQTEGKLMADWLVKKGIPAERIFQDNYARSTVENALFSRYALTKHRI 301
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
K +++SS H++R+ F + S YL PL+
Sbjct: 302 KTAVIISSGSHVRRADAIFTVASWQSGPSDITYLTVVAPDKPLAE 346
>gi|312140170|ref|YP_004007506.1| hypothetical protein REQ_28070 [Rhodococcus equi 103S]
gi|311889509|emb|CBH48826.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length = 172
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 16/149 (10%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
P R+ T RL + K +++ GD E+ L+E GV
Sbjct: 7 RDGRPMKFLQGRLDTTARLVRDGKVA-----VVLVSGDAHGRSGDETAAMVEYLVEVGVP 61
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
R I + LDT+ ++ +N + V+ +HL R+ + GI +
Sbjct: 62 RTSIVADPYGLDTYDTCVRAAETFG---IRNALFVTQPFHLPRTVALARAAGIEAHGVYA 118
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGI 233
S + ++E +
Sbjct: 119 GRAGGRRSTL--------VRNTVREVLAY 139
>gi|213025781|ref|ZP_03340228.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 172
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 18/149 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD K E L+ GV I
Sbjct: 33 NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIF 87
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + + ++S A+H +R+ Q +GI+ + LN
Sbjct: 88 CDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWLAQQYGIDAIGVNAPDLNK 144
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYY 238
+ T L+E + + A
Sbjct: 145 RHG----------TYTRLREKLARVSAVL 163
>gi|169830663|ref|YP_001716645.1| hypothetical protein Daud_0467 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637507|gb|ACA59013.1| protein of unknown function DUF218 [Candidatus Desulforudis
audaxviator MP104C]
Length = 264
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 76/223 (34%), Gaps = 36/223 (16%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ + +R + + + ++ + L+ ++V
Sbjct: 23 GGFAFWRRRLRNLALGTLVLAAVVWLSLPAVGRFLV------------VADKPAPAEVLV 70
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+L R+ RLY+ + + G P L E
Sbjct: 71 VLSG-----------------DRGERLEYAFRLYQEGLADRLLLS-----GGPLYADLTE 108
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + L GV I +E ++ +T+QNA +S M++ + I++SS YH++R +
Sbjct: 109 ADLLRRHALMLGVPEYKIIMEPRATNTYQNALYSREMMEYYGLDSAIVISSPYHMRRVRA 168
Query: 191 YFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
F G + + ++++ + + L EY+
Sbjct: 169 LFDEVYRGSDIRLVYLPVEDSWFDPERWWESAAGRRVVLAEYL 211
>gi|300717554|ref|YP_003742357.1| hypothetical protein [Erwinia billingiae Eb661]
gi|299063390|emb|CAX60510.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 288
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 68/215 (31%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++++ + ++ + + + + + + + V+LG
Sbjct: 2 VKRLIYGLIIIITLMVLTALGLDRWMS---WKTAPYIYENLKSLPHRQVGVVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ R+ + Y S K + + + GD H E + L+
Sbjct: 59 GGG------INQYYLYRMQGALNAYNSGKVNYLLLS-----GDNALHSYNEPMTMRKDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV+ DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 AAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ P N + + ++E L
Sbjct: 165 QCYAV----------PSPKN--MLNIRVREVGARL 187
>gi|300778324|ref|ZP_07088182.1| SanA protein [Chryseobacterium gleum ATCC 35910]
gi|300503834|gb|EFK34974.1| SanA protein [Chryseobacterium gleum ATCC 35910]
Length = 205
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 68/227 (29%), Gaps = 31/227 (13%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ I+ IF + L + + + + R I ++LG
Sbjct: 2 RVIKNIFNLGFISLELGILMICLCNAWV---FGLTNGRTYTKISKIPPREIALVLGTSPK 58
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ + R+ LY K + + S G E N
Sbjct: 59 MRSGKS------NPYFTKRMDAAALLYHHGKIKKIIVSGEKSKG------YNEPGAMRNY 106
Query: 138 LLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ V D I + + +T+++ + K I+VS YH R+ + ++
Sbjct: 107 LVNQEGVPEDIIVEDPKGFNTYKSILRCKDVYKKKNV---IIVSQGYHNLRALFFARNND 163
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI---LIAYYRG 240
+N + + S A +E + ++ + G
Sbjct: 164 MNALGFDAQDVTKPESFYRNQA---------REILARVIAVVYFILG 201
>gi|156975997|ref|YP_001446903.1| hypothetical protein VIBHAR_04767 [Vibrio harveyi ATCC BAA-1116]
gi|156527591|gb|ABU72676.1| hypothetical protein VIBHAR_04767 [Vibrio harveyi ATCC BAA-1116]
Length = 365
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D IV LG ++ I + R+ T+ + K+ +I+ G
Sbjct: 188 KLDDKGAIVTLGYALNPDGSMHQILV-------ERLETTLAMAKANPDA-----LIVLTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+E G+ +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL ++ E +GI R
Sbjct: 296 ASHVRRGQTLFEIASWQTGPQDITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 350
>gi|219870725|ref|YP_002475100.1| SanA protein, membrane protein [Haemophilus parasuis SH0165]
gi|219690929|gb|ACL32152.1| SanA protein, membrane protein [Haemophilus parasuis SH0165]
Length = 235
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/220 (11%), Positives = 68/220 (30%), Gaps = 32/220 (14%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + K CF L ++ + + + ++LG
Sbjct: 21 ARVSIWLMKGILGLCFPLFLLMFAIDFATGYWVR------DQIYIDVRQLPQREYALVLG 74
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
P + + R+ +++ K + ++ GD + E +
Sbjct: 75 TAKYYPSGSPNLYYKY------RLDAAKAVFEHNKVNY-----LLVSGDNKTAYYNEPKM 123
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L + G+ I+ + +T + + + + + I++S +H +R+ +
Sbjct: 124 MTRDLRQMGIPWQRIRQDYAGYNTLDSIIRADKVFQ---LQPFIIISQQFHCERALFIAK 180
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I + Y +A+Y + ++E+
Sbjct: 181 FHQIEAVCFAAKYPDAHYKVR------------IREFFAR 208
>gi|271500869|ref|YP_003333894.1| hypothetical protein Dd586_2338 [Dickeya dadantii Ech586]
gi|270344424|gb|ACZ77189.1| protein of unknown function DUF218 [Dickeya dadantii Ech586]
Length = 252
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 51/191 (26%), Gaps = 16/191 (8%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
K F + + + + + + V+LG
Sbjct: 2 WKRLIFGLFATILVLACSAFLLDRCIS--WRTAPYIYEDVEDLPPRQVGVVLGTAKYYRA 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ RI + + S K + + GD + E + L+
Sbjct: 60 ------GVINQYYLFRIQGALNAFNSGKVSYLLLS-----GDNAQQSYNEPMTMRRDLIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV I L+ T + + + +++ +H +R+ H GI +
Sbjct: 109 AGVPPASIVLDYAGFRTLDSIVRTRKVFDTNDFT---IITQRFHCERALFIALHKGIQAQ 165
Query: 201 ASCSDYLNAYY 211
+
Sbjct: 166 CFAVPSPKDIW 176
>gi|315444167|ref|YP_004077046.1| hypothetical protein Mspyr1_25770 [Mycobacterium sp. Spyr1]
gi|315262470|gb|ADT99211.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 185
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G ++R+ + + + Q II++GG+ ++G
Sbjct: 36 AIVILGYGLKPD-------GTMRLILHTRVLAGLAVAQMFPQ----APIIVTGGN-PRNG 83
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L G R+ I LE ++ T QNA FS + + IILV+S+ H R
Sbjct: 84 NTEAEQMGKMLRLYGTPRERIILEERANSTVQNAAFSVPLAEQAGASGIILVTSSSHQDR 143
Query: 188 SQLYFQHFGINTKA 201
+ F G N A
Sbjct: 144 ADGIFADAGGNVLA 157
>gi|24216823|ref|NP_714304.1| SanA-like protein [Leptospira interrogans serovar Lai str. 56601]
gi|45659108|ref|YP_003194.1| vancomycin resistance protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24198192|gb|AAN51322.1| SanA-related protein [Leptospira interrogans serovar Lai str.
56601]
gi|45602354|gb|AAS71831.1| vancomycin resistance protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 230
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 16/167 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K + V+ G EPS R+ + LY K + +
Sbjct: 48 RSAKPATVAVVPGASVYKN--------EPSAVLKDRLDCALELYHQGKVKKILLS----- 94
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD E +L++ V DI ++ T + + + +++I VS
Sbjct: 95 GDNGSIYYNEVKPMLLYILKNEVNEKDIFVDHAGFRTLDTLVRAKEIFQ---IQDLIFVS 151
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ R+ G+ +A SD F+ LA
Sbjct: 152 QRVYQPRAAFLANKIGLKFQAFESDRRIYTSGPFSRFREFFARTLAW 198
>gi|145633280|ref|ZP_01789011.1| SanA [Haemophilus influenzae 3655]
gi|144986126|gb|EDJ92716.1| SanA [Haemophilus influenzae 3655]
Length = 226
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 66/225 (29%), Gaps = 25/225 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + F LL++ I+L L + + + + +
Sbjct: 2 FSAMLVKKFSPKFTALFRALLYAI-----FALIILCLLVDRGVSFYVRDKIFTNIDELPF 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+ + + +P+ SR+ L + K + + + GD + E
Sbjct: 57 RPYALVLGTSKYTVSGKPNVYYDSRLTAAKSLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVQAFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 169 AQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|91223050|ref|ZP_01258316.1| hypothetical protein V12G01_04386 [Vibrio alginolyticus 12G01]
gi|91191863|gb|EAS78126.1| hypothetical protein V12G01_04386 [Vibrio alginolyticus 12G01]
Length = 365
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D IV LG ++ I + R+ T+ + K+ +I+ G
Sbjct: 188 KLDDKGAIVTLGYALNPDGSMHQILV-------ERLETTLAMAKANPDA-----LIVLTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+E G+ +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL ++ E +GI R
Sbjct: 296 ASHVRRGQTLFEIASWQTGPQDITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 350
>gi|318040918|ref|ZP_07972874.1| hypothetical protein SCB01_04389 [Synechococcus sp. CB0101]
Length = 183
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 65/203 (32%), Gaps = 37/203 (18%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
I T L ++ SP + V+LG G A + R
Sbjct: 15 PIGTTALTTWMEEQIPTSTSSPGPLHPPAVAVVLGRG-----PQIAAASTRLAAALLRDQ 69
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ +Y S ++ L GV D I ++ + T+
Sbjct: 70 DAAAVYVSG----------------------DATSTAEALERQGVASDQIAGDSCARTTW 107
Query: 159 QNAQFSSSMIK-NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+NA +++ ++ + ++L++ + L R+ F+ G+ + + P
Sbjct: 108 ENATHTAAWLRIHHPLAPVLLITDPWQLPRATAAFRRQGLEVQPMAIN---------PHL 158
Query: 218 ANFYLTELALKEYIGILIAYYRG 240
LAL+E + +G
Sbjct: 159 TARQRNRLALRETAATWLYRLQG 181
>gi|320184632|gb|EFW59429.1| SanA protein [Shigella flexneri CDC 796-83]
gi|332091879|gb|EGI96957.1| hypothetical protein SB359474_3411 [Shigella boydii 3594-74]
Length = 203
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 46/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 43 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQKALIAKGVPAKVIF 97
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + + I+ + LN
Sbjct: 98 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYSIDAIGFNAPDLNM 154
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 155 KHGFYTQ----------LREKLARVSA 171
>gi|110597117|ref|ZP_01385406.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
gi|110341308|gb|EAT59773.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length = 599
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 74/228 (32%), Gaps = 29/228 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ ++ ++L+ I + + L + + IV+
Sbjct: 392 RHRSAWLMPLTVLLMLYLVIFHSPLFWFIGDQLVVRHAPL--------KTDAIVVFSG-- 441
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ R + +R Y+ I +S G Q L+E V
Sbjct: 442 ------NGESAYRNDSYQRRALDAVRFYRQGYAPH----IFLSSGKEQD--LSEVDVIKL 489
Query: 137 KLLESGVERDDIKLETQ-SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L + GV I + + T +N + ++ +I+ ++S YH +R+ ++
Sbjct: 490 YLEDKGVAASAIHILDKYPKSTSENVEMVMQQLRRQGVHSILFLTSPYHGRRALWTWRKQ 549
Query: 196 GINT---KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + D A A + + EY+ I+ +++G
Sbjct: 550 APDITVLTPAVVDTPPADPQW---GATVDQISVIVYEYVAIVYNWFQG 594
>gi|15602732|ref|NP_245804.1| SanA [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721178|gb|AAK02951.1| SanA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 238
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 70/218 (32%), Gaps = 33/218 (15%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++IR I ++ + I + K++ + P V+LG
Sbjct: 16 KRAIRYILVAVSSFIVLLVLIDQAIGFYVRKNIYTDINKLPYRP-------YGVVLGTSK 68
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ ++R+ ++ + K + + GD + + E
Sbjct: 69 YFEKN------TLNLFYHNRLLAAHEVFSARKIDYLLLS-----GDNRTNQYNEPRNMFK 117
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L + G+ + + ++ T + + + K +++ +H +R+ ++
Sbjct: 118 DLRKMGIAAEFMYMDFAGFRTLDSVIRAQQVFKAHSFT---IITQKFHCERALFIAKYHN 174
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I+ +DY +Y + +E+ +
Sbjct: 175 IDAICFAADYPQGHYFVR------------FREFFARI 200
>gi|301170000|emb|CBW29604.1| predicted protein [Haemophilus influenzae 10810]
Length = 226
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 67/225 (29%), Gaps = 25/225 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + + F LL++ I+L L + + + + +
Sbjct: 2 FTAMLVKKLSPKFTALFRALLYAI-----FALIILCLLVDRGVSFYVRDKIFTNIDELPF 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+ + + +P+ SR+ L + K + + + GD + E
Sbjct: 57 RPYALVLGTSKYTVSGKPNVYYDSRLTAAKNLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVPETLMFRDFAGFRTLDSVVRADKIFQVQAFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 169 AQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|270261051|ref|ZP_06189324.1| vancomycin sensitivity [Serratia odorifera 4Rx13]
gi|270044535|gb|EFA17626.1| vancomycin sensitivity [Serratia odorifera 4Rx13]
Length = 247
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 55/185 (29%), Gaps = 17/185 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ ++ + + + + Q + V+LG
Sbjct: 2 WKRLIISLFIIIAVLMLSALALDRWIS---WKTAPYVYDELQGLPHRQVGVVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + GD + E + L+
Sbjct: 59 TGVINQYYRY------RIQGAINAYNSGKVKYLLLS-----GDNAQQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 AAGVAPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHMGIQA 164
Query: 200 KASCS 204
+
Sbjct: 165 QCYAV 169
>gi|242279972|ref|YP_002992101.1| hypothetical protein Desal_2506 [Desulfovibrio salexigens DSM 2638]
gi|242122866|gb|ACS80562.1| protein of unknown function DUF218 [Desulfovibrio salexigens DSM
2638]
Length = 214
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 67/219 (30%), Gaps = 31/219 (14%)
Query: 32 LFSFIGWGIIPTILLKHLQFSY-QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L + IG + IL + F + L + + IV+LG
Sbjct: 7 LLTLIGALTVAGILAAAVLFFFAPVLLQQEDELEKADAIVVLGGHYY------------- 53
Query: 91 FQSYSRIFETMRLYKSCKQHSMHC------TIIISGGDPQKHGLAESIVYNNKLLESGVE 144
R LY + I + D H + V+ + LL+ V
Sbjct: 54 -----RPLYAADLYNKGYAPRILASKPVITPEIEAVRDLDIHFPYQWEVFRDVLLKKDVP 108
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKA 201
+ I+ ++ + + Q K+IILV+S H +R+ + F+ +
Sbjct: 109 AERIEFFGKANISTLDEAEKLRDKLTPQIKSIILVTSPMHTRRAGIIFREILPPNVKIIV 168
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ Y NF + E L + G
Sbjct: 169 VGTPYEVTPERW---WTNFRAAPFVVLEVAKTLYYEFGG 204
>gi|158426237|ref|YP_001527529.1| hypothetical protein AZC_4613 [Azorhizobium caulinodans ORS 571]
gi|158333126|dbj|BAF90611.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 256
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 77/223 (34%), Gaps = 42/223 (18%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ L F+G ++ T + + P K + IV+L
Sbjct: 27 FWLRRAALSLAFVSGTLALLFVGGFVVFTTAIAPRE---------PAGLKPADGIVVLTG 77
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SRI + ++L S + + + + + ++
Sbjct: 78 G------------------ASRIADGVQLLASGHGQRLLISGVNRA--TSQDEIRRTLPD 117
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
N LL+ V+ ++L+TF NA ++ + +++++V+SA+H+ R+ +
Sbjct: 118 NEHLLDCCVDL-----GHRALNTFGNAIEAAEWTRAQGFRSLVVVTSAWHMPRALVELGR 172
Query: 195 F----GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +D + + +L LKEY+
Sbjct: 173 ALPEVELVAYPVVTDRMQSGGWWTDP----QTVKLLLKEYLKY 211
>gi|91212515|ref|YP_542501.1| hypothetical protein UTI89_C3524 [Escherichia coli UTI89]
gi|91074089|gb|ABE08970.1| hypothetical protein YgjQ [Escherichia coli UTI89]
Length = 233
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 49/147 (33%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 73 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 127
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + ++ + ++S +H +R+ + +GI+ + LN
Sbjct: 128 CDYAGFSTLDSVVRANKVFSENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 184
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ + L+E + + A
Sbjct: 185 KHGLYTQ----------LREKLARVSA 201
>gi|167724441|ref|ZP_02407677.1| hypothetical protein BpseD_35807 [Burkholderia pseudomallei DM98]
Length = 111
Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ + L+ + + F IG G++P LL+ LQ Y
Sbjct: 5 LLTVVALVAVLLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYA--ARPAI 62
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
+ N IV+LG GT +EP SYSR+ E LY+ C++
Sbjct: 63 EWGERNAIVMLGLGTE--KIAATGAVEPGTFSYSRVVEAASLYRDCRRAR 110
>gi|325281519|ref|YP_004254061.1| hypothetical protein Odosp_2910 [Odoribacter splanchnicus DSM
20712]
gi|324313328|gb|ADY33881.1| protein of unknown function DUF218 [Odoribacter splanchnicus DSM
20712]
Length = 227
Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 54/161 (33%), Gaps = 18/161 (11%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + P+ RI + L+++ K + I+ GD ++ E +
Sbjct: 64 GVLLGTSPKLRGGRPNLYFNYRITAAVELFQAGK-----ISRILVSGDNRRMNYNEPVEM 118
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ I ++ + T + + + + ++S +H +R+
Sbjct: 119 RKALIAHGIPDSVIVMDFAGIRTLDSVIRAKKVFGQDRFT---IISQRFHNERALYIAGR 175
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
GI + + + + ++E + +
Sbjct: 176 NGIEAVGFNAKDV----------DVYSGVKTRVRELLARVK 206
>gi|319409380|emb|CBI83024.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 225
Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 73/229 (31%), Gaps = 36/229 (15%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ + ++ L + + G + ++ L P + I++L
Sbjct: 28 ALRFYKRFSRYVPLTVLALFITILLIGATFVTFSEKIEH-----LTPPNPLPQADAIIVL 82
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G RI L + + + + S D + L ++
Sbjct: 83 TGGEN------------------RIKTGFDLLQKGLGSRLLISGVNSTIDL--NKLIDAT 122
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
N LL + ++ +T NA+ S++ IK K + +V+ YH+ RS L
Sbjct: 123 YINPHLL-----VSRVDFGYEATNTKGNAEESAAWIKQHNYKTVYIVTHDYHMVRSLLEL 177
Query: 193 QHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ I+ A I + + EYI + Y R
Sbjct: 178 KYLMPHIDFIAYPIKENTTGSWI----KQINQMRILVSEYIKNIGVYIR 222
>gi|255535094|ref|YP_003095465.1| SanA protein [Flavobacteriaceae bacterium 3519-10]
gi|255341290|gb|ACU07403.1| SanA protein [Flavobacteriaceae bacterium 3519-10]
Length = 206
Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 70/226 (30%), Gaps = 30/226 (13%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ F L+ + ++ I + L R ++LG +
Sbjct: 2 KKLLDILRTFFTLVEIMVLLMVLANIWVYALTNG--RTFTRISKIPPRETALVLGTSPRM 59
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ +R+ LY K + + S G E N L
Sbjct: 60 KSGRS------NPYFTARMDAAALLYHHGKIKRIIVSGEKSPG------YDEPYAMKNYL 107
Query: 139 L-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ + GV + I + + T + + K N+I+VS +H R+ Y ++ +
Sbjct: 108 IYQEGVPENIITEDPKGFKTQASISNCKKIYKQ---SNVIIVSQGFHNLRALFYARNNDM 164
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI---LIAYYRG 240
N + + A S + +E++ ++ Y G
Sbjct: 165 NALGFDAQDVLANRSYYRNQS---------REFLARVLAVVYYIFG 201
>gi|239833000|ref|ZP_04681329.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825267|gb|EEQ96835.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 302
Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 81/238 (34%), Gaps = 43/238 (18%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+++ ++ + + + + + +LL +G+ + + P +
Sbjct: 86 FLWSVMM---RMFRRFQPVSIVLFVILLAFLVGFVAFGEKVTS---------MQPPAIDE 133
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ I++L G SRI + L K + + + +
Sbjct: 134 PADAIIVLTGG------------------QSRIQAAVNLLKDKRGKRLLISGVHP--STN 173
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ L + + L + V+ D +L+T NA S I+ + +ILV++ YH
Sbjct: 174 EKVLQRATHADQSLFDCCVDLDR-----SALNTIGNAAESERWIRTNNYRRVILVTNNYH 228
Query: 185 LKRSQLYFQHF--GINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ RS L + + + +S + + + EY+ L A R
Sbjct: 229 IPRSTLEMSYLMKDVEFVPYPVVNGERREHSWVAEGDTLRVLFI---EYVKYLGAVVR 283
>gi|117625394|ref|YP_858717.1| hypothetical protein APECO1_3333 [Escherichia coli APEC O1]
gi|218560170|ref|YP_002393083.1| thioredoxin-like [Escherichia coli S88]
gi|237706153|ref|ZP_04536634.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|115514518|gb|ABJ02593.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218366939|emb|CAR04710.1| putative thioredoxin-like [Escherichia coli S88]
gi|226899193|gb|EEH85452.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294491677|gb|ADE90433.1| putative SanA protein [Escherichia coli IHE3034]
gi|307625302|gb|ADN69606.1| putative thioredoxin-like protein [Escherichia coli UM146]
gi|315288869|gb|EFU48267.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|323951383|gb|EGB47258.1| hypothetical protein ERKG_02026 [Escherichia coli H252]
gi|323957755|gb|EGB53469.1| hypothetical protein ERLG_01081 [Escherichia coli H263]
Length = 230
Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 49/147 (33%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 70 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 124
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + ++ + ++S +H +R+ + +GI+ + LN
Sbjct: 125 CDYAGFSTLDSVVRANKVFSENHIT---IISQEFHNQRAIWLAKQYGIDAIGFNAPDLNM 181
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ + L+E + + A
Sbjct: 182 KHGLYTQ----------LREKLARVSA 198
>gi|227893874|ref|ZP_04011679.1| integral membrane protein [Lactobacillus ultunensis DSM 16047]
gi|227864363|gb|EEJ71784.1| integral membrane protein [Lactobacillus ultunensis DSM 16047]
Length = 367
Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/264 (16%), Positives = 86/264 (32%), Gaps = 47/264 (17%)
Query: 1 MLLSWIFLIVSYWHLLCQ---------SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQF 51
++ +W+FL + + + ++ ++F F +P L L
Sbjct: 88 LIFAWLFLFWNAYFVWKYESHTLPNLLTLISGVIALVLSIIFLFGPGQYLPHWLSALLAS 147
Query: 52 ----------------SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ + +++LG G + S +
Sbjct: 148 IPAIAIYLGLVLYNFLLNLLLYQIYPRRYKQDYLIVLGAGLINGD-------QVSKLLAA 200
Query: 96 RIFETMRLYKSCKQHSMHCTI-IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
I ++ Q I I+SGG ++E + GV D I +E QS
Sbjct: 201 CINRAIQYSNRQYQKGRKRPILIMSGGQGPDEKISEGLAMARFAHHRGVSPDQILIEDQS 260
Query: 155 LDTFQNAQFSSSMIKNMQGKNII---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
+T+QN FS + G N S+ YH+ R+ L + G+ +
Sbjct: 261 KNTYQNMLFSKRLAIKDFGSNKFRATFFSNNYHIFRAGLLAKEVGLKANGVGAF------ 314
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
+ +YL ++E+ G+ +
Sbjct: 315 -----TRFYYLPNAVIREFAGVFV 333
>gi|15805223|ref|NP_293911.1| sanA protein [Deinococcus radiodurans R1]
gi|6457856|gb|AAF09774.1|AE001881_3 sanA protein [Deinococcus radiodurans R1]
Length = 222
Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 67/229 (29%), Gaps = 31/229 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
++ + R +L + ++P ++ RP P
Sbjct: 6 LTPVKTRIRWRRWAAGGVGALLAGVLLPQIVVPLAAW---GRTFDRPEDLPARHV----- 57
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
G + + + RI YK+ K +++ GD
Sbjct: 58 -----GLVLGTSKYLASGRVNRYYLYRIDAAEAAYKAGK-----VRVLLLSGDNSSVSYD 107
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E LLE G+ + + L+ T + ++ + Q L+S +H +R+
Sbjct: 108 EPTTMKEDLLERGIPAEQLVLDYAGFRTLDSVVRAAEVFGTRQFT---LISQPFHNERAI 164
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G++ A + + + +E + + A
Sbjct: 165 FLARTRGLDAAALNARDVTGRSGLKVQG----------REVLARVKAVL 203
>gi|239833683|ref|ZP_04682011.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239821746|gb|EEQ93315.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 206
Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 44/217 (20%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
++L I +GI + + L ++IV+ G
Sbjct: 3 LLVVLPCAILFGIAAMFFSQPV-------LTLQDDGGRADVIVVPGG------------- 42
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
R + RL+K + ++ GD + ++ +GV
Sbjct: 43 ----DGPPRAAQAARLWKEGRSP---VILVTGDGDCLYN--------KRIMVRNGVNPSA 87
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF----GINTKASC 203
I +E QS T+QNAQFS+ +++ ++ ++ ++V++ YH +R+ F+ +
Sbjct: 88 IFVECQSGSTWQNAQFSAPVLREIRARSALVVTNWYHSRRAIASFRAACPQMRFISSPIG 147
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
D + P EL KEY+ + G
Sbjct: 148 GDDGRPGFPATP-----ADMELVAKEYVKLGWYLVSG 179
>gi|226327284|ref|ZP_03802802.1| hypothetical protein PROPEN_01151 [Proteus penneri ATCC 35198]
gi|225204502|gb|EEG86856.1| hypothetical protein PROPEN_01151 [Proteus penneri ATCC 35198]
Length = 379
Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 12/165 (7%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
L KD N IV LG + R+ +T+ + K
Sbjct: 194 PADLAKLNKTKDNNAIVTLGYALNPD-------GTMNKILIERLNKTLEVAKQLPDAM-- 244
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I+ G K E + + L+++G+ + I E + T +NA FS + +
Sbjct: 245 ---IVVTGGVPKAHQTEGKLMADWLVKNGIAPERIFQENYARTTVENALFSRYALTKHRI 301
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
K +++SS H++R+ F + S YL PL+
Sbjct: 302 KTAVIISSGSHVRRADAIFTIASWQSGPSDISYLTVVAPDKPLAE 346
>gi|296110233|ref|YP_003620614.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
gi|295831764|gb|ADG39645.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
Length = 314
Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 21/194 (10%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
+L L ++ P++ K+ ++LG+G T+ + +
Sbjct: 115 FWVLTFLASYMITKVVHPKFNKE--YAIILGSGLLNGDTVSPLLGSRI------MVAANF 166
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+ K++ +I+SGG + L E+ + GV DI +E QS +T+QN
Sbjct: 167 KNQQFKKNKKTMKLIMSGGQGKDELLPEAEAMKAYAIMHGVAESDILVENQSKNTYQNML 226
Query: 163 FSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
FS +++ ++ YH+ R+ + G+N + S ++ +
Sbjct: 227 FSKQVVEKNGFNLQKGIFATNDYHVFRAAGFAHLVGLNIEGIGS-----------KTSKY 275
Query: 221 YLTELALKEYIGIL 234
+L ++EYI IL
Sbjct: 276 FLPNALIREYIAIL 289
>gi|209551150|ref|YP_002283067.1| hypothetical protein Rleg2_3574 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536906|gb|ACI56841.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 238
Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 71/216 (32%), Gaps = 38/216 (17%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
F I + L+F+ L P + + IV+L G
Sbjct: 36 WGGFACVLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGG---------------- 79
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
Y RI + + L + + + + + + L V+
Sbjct: 80 --YQRIDQAVELLQKGAGKRLLISGVHPT--TTPRQIRRMTQGSADLFSCCVDI-----G 130
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR--SQLYFQHFGINTKASCS---DY 206
++DT NA+ +S+ I +++I+V++ YH+ R ++L + I D
Sbjct: 131 HDAIDTIGNAEEASNWIHANGYRSVIVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDL 190
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ P + + L EY +L G R
Sbjct: 191 KTRNWFTDPNA-----MRVMLAEYAKVL---LAGAR 218
>gi|319950302|ref|ZP_08024221.1| integral membrane protein [Dietzia cinnamea P4]
gi|319435994|gb|EFV91195.1| integral membrane protein [Dietzia cinnamea P4]
Length = 210
Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G P I P + R+ RL + II G ++G
Sbjct: 82 IVILGAGL-----FPDGGIRPVLE--ERLRTGYRLAQEYPTAR-----IIVTGGVPQNGR 129
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L +G+ I E S T QNAQF+ + ++ ++V++ H+KR+
Sbjct: 130 TEARAMGDWLRGAGISPLRITEEGSSNSTVQNAQFTDRIFRDRGTTGAVVVTTGDHVKRA 189
Query: 189 QLYFQHF 195
L F+
Sbjct: 190 VLNFRQA 196
>gi|238898866|ref|YP_002924548.1| vancomycin sensitivity, putative oxidoreductase [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229466626|gb|ACQ68400.1| vancomycin sensitivity, putative oxidoreductase [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 249
Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 65/215 (30%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ IF F+LL + L + R + + + G +
Sbjct: 2 WKTIFISLFFILLSLVMS---------SILIDRWIRLKTAHHIYEKIQFLPTRSVGLVMG 52
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ R+ ++LYKS K ++ GD + E +
Sbjct: 53 TAKYYRTGVINQFYQYRLQGALQLYKSGK-----IKYLLLSGDNAQPSYNEPRTMKRDFI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
SGV DI L+ T + + + I+++ +H +R+ +FGI
Sbjct: 108 ASGVFPQDIILDYAGFRTLDSIVRTHKVFNTNNF---IIITQRFHCERALFIALYFGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
P LT L+E + +
Sbjct: 165 ACYAV----------PSPKKMLLTR--LREVLARI 187
>gi|75674776|ref|YP_317197.1| hypothetical protein Nwi_0578 [Nitrobacter winogradskyi Nb-255]
gi|74419646|gb|ABA03845.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 241
Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 69/214 (32%), Gaps = 31/214 (14%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +F+G + L L+ +P + + IV+L G+
Sbjct: 24 LLATLVAAAGIAFVGAAVGFVGFLSQLRGVETKPA------ANADGIVVLTGGS------ 71
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
SRI + + L + + + + LL
Sbjct: 72 ------------SRISDAVDLLAGGYGKRLLISGVHPTNGVSDISRSLPDSQR--LLTCC 117
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V+ D +++T NA + + +++I+V+S YH+ R+ + H +
Sbjct: 118 VDLDR-----SAVNTRSNASETRRWVDGQGFRSLIVVTSNYHMPRAIVELSHAMPDVTLI 172
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + P + L L EY+ L A
Sbjct: 173 PFAVIGEKWREEPWWTSGATLRLLLSEYVKYLAA 206
>gi|323163136|gb|EFZ48969.1| sanA [Escherichia coli E128010]
gi|323183035|gb|EFZ68433.1| sanA [Escherichia coli 1357]
Length = 207
Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 46/147 (31%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 47 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 101
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + + I+ + LN
Sbjct: 102 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYSIDAIGFNAPDLNM 158
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 159 KHGFYTQ----------LREKLARVSA 175
>gi|327394490|dbj|BAK11912.1| protein SanA [Pantoea ananatis AJ13355]
Length = 239
Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 60/185 (32%), Gaps = 17/185 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++++F F++L + + + + + V+LG
Sbjct: 2 LKRVFIALLFIILTMVATALGLDRWIS---WKTAPYIYDNLASLPHRQVGVVLGTA---- 54
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ R+ + Y S K + + + GD + E + L+
Sbjct: 55 --KYYRTGVINQYYLYRMQGALNAYNSGKVNYLLLS-----GDNAQQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV+ DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 KGGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHLGIQA 164
Query: 200 KASCS 204
+
Sbjct: 165 QCYAV 169
>gi|326384925|ref|ZP_08206599.1| hypothetical protein SCNU_18362 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196315|gb|EGD53515.1| hypothetical protein SCNU_18362 [Gordonia neofelifaecis NRRL
B-59395]
Length = 210
Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 64/155 (41%), Gaps = 19/155 (12%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
G IV+LG P R+ L ++ + II++GG+
Sbjct: 75 PPGRYIVVLGA-------RMETLGNPPKILAQRLDRAASLARANPFN----RIIVTGGNS 123
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E++ + +L + GV + E ++ T +NAQ + +M+K + ++V++ +
Sbjct: 124 WWLPVPEAMFMHAQLAQRGVTPLKVIEEPTAMSTVENAQRTVAMLKGLNASGAVIVTNDF 183
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
H+KR+ F+ + N + +P A
Sbjct: 184 HMKRALDNFRDE--------AKRQNTRLTFVPSYA 210
>gi|325676948|ref|ZP_08156620.1| membrane protein [Rhodococcus equi ATCC 33707]
gi|325552248|gb|EGD21938.1| membrane protein [Rhodococcus equi ATCC 33707]
Length = 218
Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 16/149 (10%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
P R+ T RL + K +++ GD E L+E GV
Sbjct: 53 RDGRPMKFLQGRLDTTARLVRDGKVA-----VVLVSGDAHGRSGDEIAAMVEYLVEVGVP 107
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
R I + LDT+ ++ +N + V+ +HL R+ + GI +
Sbjct: 108 RTSIVADPYGLDTYDTCVRAAETFG---IRNALFVTQPFHLPRTVALARAAGIEAHGVYA 164
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGI 233
S + ++E +
Sbjct: 165 GRAGGRRSTL--------VRNTVREMLAY 185
>gi|238785456|ref|ZP_04629441.1| hypothetical protein yberc0001_16880 [Yersinia bercovieri ATCC
43970]
gi|238713661|gb|EEQ05688.1| hypothetical protein yberc0001_16880 [Yersinia bercovieri ATCC
43970]
Length = 253
Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 61/215 (28%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ + + + + + Q + V+LG
Sbjct: 2 WKRLIISLIIIAGLLMVTAIALDRWIS---WKTAPFIYDELQDLPHRQVGVVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + GD H E + L+
Sbjct: 59 TGGINQFYQY------RIQGALNAYNSGKVSYLLLS-----GDNALHSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + I+++ +H +R+ QH GI
Sbjct: 108 AAGVPPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAQHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + ++E L
Sbjct: 165 QCFAVPSPK------------DMLNVRVREIFARL 187
>gi|153832603|ref|ZP_01985270.1| transporter [Vibrio harveyi HY01]
gi|148871169|gb|EDL70047.1| transporter [Vibrio harveyi HY01]
Length = 365
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D IV LG ++ I + R+ T+ + K+ +I+ G
Sbjct: 188 KLDDKGAIVTLGYALNPDGSMHQILV-------ERLETTLAMAKANPDA-----LIVLTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
K+ E + + L+E G+ +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPKNHKTEGKLMADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL ++ E +GI R
Sbjct: 296 ASHVRRGQTLFEISSWQTGPQSITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 350
>gi|320107145|ref|YP_004182735.1| hypothetical protein AciPR4_1937 [Terriglobus saanensis SP1PR4]
gi|319925666|gb|ADV82741.1| protein of unknown function DUF218 [Terriglobus saanensis SP1PR4]
Length = 204
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 61/182 (33%), Gaps = 20/182 (10%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ I++LG T P+ + R+ E +R ++ II G
Sbjct: 35 KLGKVDAIIVLGCPTKPD-------GSPTPEQRERVLEGVREFRKGVSDH-----IIMTG 82
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E+ +GV + E Q+ +T QN +S +++ ++SS
Sbjct: 83 AAAHNQFVEAHSMALLAEANGVPASAVIEEDQAQNTVQNIYYSEKIMEKSGWHTTEVISS 142
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF-YLTELALKEYIGILIAYYRG 240
HL R+ L H + + P+ EL E G L + G
Sbjct: 143 PSHLPRTALILHH-------WPQLQWETHPAQWPVEYGLKKKWELYWGEATGCLRIRHEG 195
Query: 241 NR 242
R
Sbjct: 196 FR 197
>gi|225568301|ref|ZP_03777326.1| hypothetical protein CLOHYLEM_04375 [Clostridium hylemonae DSM
15053]
gi|225163020|gb|EEG75639.1| hypothetical protein CLOHYLEM_04375 [Clostridium hylemonae DSM
15053]
Length = 242
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 35/237 (14%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSF-----IGWGIIPTILLKHLQFSYQRPL-----LSPQW 62
W+ ++C L F + + +L + +
Sbjct: 28 WNSTFARFWLAAGLACGALWELFQLRPELAGSPLWKLLWIPAAVFAAVEIRIAAGMVSTE 87
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+KD +++LG ++R + + +I+SGG
Sbjct: 88 EKDIPYLIVLGAQVKGTKITDSLRRRLKRSAA------------YLSENPGTKVIVSGGQ 135
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+AE+ + L + G++R I LE +S T +N +FS++ + +VS+
Sbjct: 136 GPGEDIAEAEAMADFLADCGIKRSRILLEDRSKSTEENLRFSAA-YLPDMTVKVGIVSNN 194
Query: 183 YHLKRSQLYFQHFGINTKA-SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H+ R+ Y G SD ++E+ + +
Sbjct: 195 FHMYRACCYAGRTGYKNVCRIPSDCSP-----------LLFANYMVREFFAVCRLWL 240
>gi|255994503|ref|ZP_05427638.1| putative SanA protein [Eubacterium saphenum ATCC 49989]
gi|255993216|gb|EEU03305.1| putative SanA protein [Eubacterium saphenum ATCC 49989]
Length = 243
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 81/236 (34%), Gaps = 31/236 (13%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ-------WKKDG 66
I ++ L I G I + ++ + ++ K+
Sbjct: 22 GFFKSIFISIVALALISGLIVAIPNGYIILSTMNDIKLNVTTKKINADEAKLKEIKKQKP 81
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I ++LG G PS R+ LY + I+ GD +
Sbjct: 82 EIAMVLGAGIINN-------NRPSKILKDRLNIAASLY-----KNKIVKKILLTGDGRNK 129
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E+ V + +++ + + ++++ + T+++ ++S+ K K ++++ YHL
Sbjct: 130 NHDETQVMYDYIIKKRIPPEALQIDPYGISTYESMARAASIYK---IKRPVIITQRYHLY 186
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
RS + G+ S+ A S+ +E I + + G R
Sbjct: 187 RSLYLGKCTGMKCIGIGSNQSRASKLYTIFSS---------RETIARIKDFATGIR 233
>gi|316936202|ref|YP_004111184.1| hypothetical protein Rpdx1_4910 [Rhodopseudomonas palustris DX-1]
gi|315603916|gb|ADU46451.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 241
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 69/212 (32%), Gaps = 28/212 (13%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
++ +G+ + + L + Q +++ IV+L G+
Sbjct: 26 ATIVAVLALGFVAVAGGFVAFLAQLHSA---ELQPRRNAEGIVVLTGGS----------- 71
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
SR+ + + L + + + + + + + V+ D
Sbjct: 72 -------SRVSDAVELLAAGYGRRLLISGVHRTNGARDISRSVPESSDWF--SCCVDLDR 122
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
++DT NA + ++ +++I+V+S YH+ R+ + + +
Sbjct: 123 -----SAVDTRSNAAETRRWVRERGFRSLIVVTSNYHMPRAIAEMSDAMPDVELIPFAVI 177
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ P + L L EY L R
Sbjct: 178 GDKWRDEPWWTSGGTLRLLLSEYAKYLAVELR 209
>gi|260596262|ref|YP_003208833.1| hypothetical protein CTU_04700 [Cronobacter turicensis z3032]
gi|260215439|emb|CBA27523.1| Uncharacterized protein ygjQ [Cronobacter turicensis z3032]
Length = 202
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 20/150 (13%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E L GV I
Sbjct: 38 NRFFNRRIEAAAALYHAGKVSW-----LLVSGDNSRADYDEPTAMAEALNRHGVPAAAIF 92
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + + + ++S A+H +R+ QH+GI+ ++
Sbjct: 93 CDYAGFSTLDSVVRARQVFQENRIT---IISQAFHNQRAIYLAQHYGIDAIGFNAEDP-- 147
Query: 210 YYSIIPLSANFYLTEL-ALKEYIGILIAYY 238
F T+ L+E + A
Sbjct: 148 ---------AFRHTQYTLLRERFARVRALL 168
>gi|2251115|dbj|BAA21122.1| hypothetical protein [Escherichia coli W3110]
Length = 170
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTW----NNSQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ +I +GG + + +
Sbjct: 82 IVVLGGGNTWNP-QWAPSSNLINNSLPRLNEGIRLWRENP----GSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGV 143
+ + V
Sbjct: 137 STAEVGARVAQSLAC 151
>gi|195873578|ref|ZP_02697480.2| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|200387035|ref|ZP_03213647.1| SanA protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204928020|ref|ZP_03219220.1| SanA protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205358504|ref|ZP_03224049.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205359734|ref|ZP_02831710.2| SanA protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205360583|ref|ZP_02684746.2| SanA protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|195633348|gb|EDX51762.1| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|199604133|gb|EDZ02678.1| SanA protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204322342|gb|EDZ07539.1| SanA protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205333860|gb|EDZ20624.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205343456|gb|EDZ30220.1| SanA protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205348359|gb|EDZ34990.1| SanA protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 210
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 33/213 (15%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+CF+L+ + + L+ + + ++ +++ G
Sbjct: 1 MACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLGAKPG---------- 49
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+ RI LY + K ++ GD K E L+ GV
Sbjct: 50 ----NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEPSAMQQALIAKGVPE 100
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I + T + + + + ++S A+H +R+ Q +GI+ +
Sbjct: 101 AAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWLAQQYGIDAIGVNAP 157
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
LN + T L+E + + A
Sbjct: 158 DLNKRHG----------TYTRLREKLARVSAVL 180
>gi|157963152|ref|YP_001503186.1| hypothetical protein Spea_3336 [Shewanella pealeana ATCC 700345]
gi|157848152|gb|ABV88651.1| protein of unknown function DUF218 [Shewanella pealeana ATCC
700345]
Length = 165
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 50/125 (40%), Gaps = 8/125 (6%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+I++LG + + S + SR + Y+ + T +
Sbjct: 4 VILVLG-------SPNDNQGRLSDIAISRCQAALWQYQLRPDSKVLLTGGFGE-HFNQTN 55
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
A ++ L++ G+ S TF++A S +++ + + LV+S +HL R
Sbjct: 56 TAHALYCQAYLIDHGMPNSAFTDIALSRFTFEDAILSKPIVEEHGFRELCLVTSEFHLPR 115
Query: 188 SQLYF 192
++L F
Sbjct: 116 ARLIF 120
>gi|148825852|ref|YP_001290605.1| hypothetical protein CGSHiEE_04065 [Haemophilus influenzae PittEE]
gi|229846836|ref|ZP_04466943.1| SanA [Haemophilus influenzae 7P49H1]
gi|319896956|ref|YP_004135151.1| sana [Haemophilus influenzae F3031]
gi|148716012|gb|ABQ98222.1| SanA [Haemophilus influenzae PittEE]
gi|229810325|gb|EEP46044.1| SanA [Haemophilus influenzae 7P49H1]
gi|317432460|emb|CBY80816.1| SanA [Haemophilus influenzae F3031]
Length = 226
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 67/226 (29%), Gaps = 27/226 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLSPQWKKDGNIIV 70
+ +L + F L ++ I+ ++ + + F + ++ +
Sbjct: 2 FTAMLVKKFSPKFTALFRALFYAIFALIILCLLVDRGVSFYVCDKIFINIDELPFRPYAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + + SR+ L + K + + + GD + E
Sbjct: 62 VLGTSKYTASGKPNVYYD------SRLMAAKSLIEQQKVNYLLLS-----GDNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVQAFT---IVSQKFHCERALL 167
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 168 IAQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|145629327|ref|ZP_01785126.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae
22.1-21]
gi|144978830|gb|EDJ88553.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae
22.1-21]
Length = 226
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 67/225 (29%), Gaps = 25/225 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + F LL++ I+L L + + + + +
Sbjct: 2 FTAMLVKKFSPKFTALFRALLYAI-----FALIILCLLVDRGVSFYVRDKIFTNIDELPF 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+ + + +P+ SR+ T L + K + + + GD + E
Sbjct: 57 RPYALVLGTSKYTVSGKPNVYYDSRLTTTKSLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVQAFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ I+ + ++E + A
Sbjct: 169 AKAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|323483771|ref|ZP_08089151.1| hypothetical protein HMPREF9474_00900 [Clostridium symbiosum
WAL-14163]
gi|323692744|ref|ZP_08106972.1| hypothetical protein HMPREF9475_01835 [Clostridium symbiosum
WAL-14673]
gi|323402962|gb|EGA95280.1| hypothetical protein HMPREF9474_00900 [Clostridium symbiosum
WAL-14163]
gi|323503186|gb|EGB19020.1| hypothetical protein HMPREF9475_01835 [Clostridium symbiosum
WAL-14673]
Length = 269
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 89/262 (33%), Gaps = 57/262 (21%)
Query: 4 SWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ L+ + H + + + + + + + LL
Sbjct: 38 IFFVLLAAGLHYYHRHPQSVPQWLVVSTATFCTACLVIFVAVELLIGW-------SAVTS 90
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ +++LG E S R+ + + ++ + +++SGG
Sbjct: 91 TRRAAEYVIVLGAKVRGS--------ELSNSLKKRLDKALEYAENNP----NTVLVLSGG 138
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---- 177
+ ++E+ + L +G+ + LE QS++T QN FS +I + +
Sbjct: 139 KGEGEDISEAEAMYDYLQYNGIPESQLLLEEQSVNTVQNIVFSKKVIDYQEKYKAMEARE 198
Query: 178 ----------------LVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSA 218
+++S YH+ R++ + G I+ A+ D + A +
Sbjct: 199 SLLDSYKERSDSVKIAVLTSNYHVFRAKSIARKQGIYNISGIAAPGDPVLAIHMW----- 253
Query: 219 NFYLTELALKEYIGILIAYYRG 240
++E +L + G
Sbjct: 254 --------VRECFAVLKDKFMG 267
>gi|296140786|ref|YP_003648029.1| hypothetical protein Tpau_3100 [Tsukamurella paurometabola DSM
20162]
gi|296028920|gb|ADG79690.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 190
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 63/206 (30%), Gaps = 37/206 (17%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
+++ + + + +++LG +
Sbjct: 2 IVLIVIVAASSTWV------QWESR-----SRIDQNASRDWVIVLG--------DRVVDG 42
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EPS R+ + + + + + G E L++ GV+
Sbjct: 43 EPSVYLRERLDTALAVLRENRARRALVS-----GHAASTKGDEVAAMRTYLIQHGVDPGK 97
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I + + T+ + ++ + ILV+ +HL+R+ + GI+ +D
Sbjct: 98 ITDDRFGVTTYNTCARARTVFG---IDSAILVTQDFHLRRAVALCRAEGIDAAGIEAD-- 152
Query: 208 NAYYSIIPLSANFYLTELALKEYIGI 233
+ + ++E IG+
Sbjct: 153 -------SDAGVYLTVRNWVRE-IGL 170
>gi|15893643|ref|NP_346992.1| hypothetical protein CA_C0352 [Clostridium acetobutylicum ATCC 824]
gi|15023198|gb|AAK78332.1|AE007549_12 Uncharacterized conserved membrane protein, SANA family
[Clostridium acetobutylicum ATCC 824]
gi|325507765|gb|ADZ19401.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
Length = 225
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + ++ + ++I++LG +PS R+ + ++L+ +
Sbjct: 35 FYKSPITKLRRDSFDVIIILG-------FPALQNGKPSPIMRERVIKAVKLFNKGYANK- 86
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II G + ES V N G+ + E +S +T+QN Q S +++N
Sbjct: 87 ----IICSGGGVYNKYIESDVMANFAKSLGIPNGCLIKEDKSRNTYQNIQNSIKIMENKH 142
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK---- 228
+ I+V+S +HL+RS + F I + SDY + + ++ + + K
Sbjct: 143 WSSAIVVTSPWHLRRSNYFLSKFNIAYRMEKSDYPKEFSYLYIIAMYMWENYVMTKTKMN 202
Query: 229 --------E----YIGILIAYY 238
E Y+ + Y
Sbjct: 203 LLLSFLLLEIYLGYLSYVYYYL 224
>gi|37525492|ref|NP_928836.1| hypothetical protein plu1545 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784920|emb|CAE13838.1| SanA protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 246
Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 64/209 (30%), Gaps = 28/209 (13%)
Query: 28 CFMLLFSFIGWGIIPTILLKHL--QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
L G I+ I L + + + + ++LG +
Sbjct: 5 LITSLLFITGMLILTAIALDRWMSWKTAPYVFDDLKQLPEREVGIVLGTA------KYYL 58
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
P+ RI + Y S K ++ GD + E + L+++G+
Sbjct: 59 SGAPNQYYMYRIQGAINAYNSDK-----IKYLLLSGDNAQQSYNEPVTMRRDLVKAGIPA 113
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+I L+ T + + + +++ +H +R+ H GI+ +
Sbjct: 114 ANIVLDFAGFRTLDSIVRTRKVFNTNDFT---IITQRFHCERALFIAMHMGIDAQCYAVS 170
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + L+E I L
Sbjct: 171 TPKN------------MITVRLREIIARL 187
>gi|330448460|ref|ZP_08312108.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492651|dbj|GAA06605.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 365
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 63/178 (35%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D IV LG R+ T+ + K+ +I+ G
Sbjct: 188 KLDDKGAIVTLGYALNPD-------GSMHPILVERLETTLAMAKANPDA-----LIVLTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E + + L+E G+ +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPMNHKTEGKLMADWLIEKGINKDRIIEENYATSTVDNALFSSYALARHHIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL ++ E +GI R
Sbjct: 296 ASHVRRGQTLFEIASWQTGPQNITFDTVSYPDKPLKELTTPSDS---ELLGIYRDALR 350
>gi|299132206|ref|ZP_07025401.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298592343|gb|EFI52543.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 236
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 72/223 (32%), Gaps = 35/223 (15%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R + L F+ + L+ +P + IV+L G
Sbjct: 16 RARAGGWPVTRFLFSFFVIFLAGFAWFASQLRSEESKPDRH------ADGIVVLTGG--- 66
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
SR+ + + L + + + + + + L
Sbjct: 67 ---------------ASRVADALDLLSKGYGKRLLISGVHPANGAAD--ILRAQPESQAL 109
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--G 196
L+ V+ D +++T NA + +K ++I+V+S YH+ R+ + H
Sbjct: 110 LKCCVDLDR-----SAVNTRSNATETRRWVKERGFHSLIVVTSNYHMPRATVELTHAMPD 164
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
I+ ++ + P + L EY+ L+A R
Sbjct: 165 IDLIFYPV--VSEAWRGEPWWNSPAGVRLVALEYVKYLVAQVR 205
>gi|296139777|ref|YP_003647020.1| hypothetical protein Tpau_2069 [Tsukamurella paurometabola DSM
20162]
gi|296027911|gb|ADG78681.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 253
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 13/154 (8%)
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
++ P G+ IV+LG G R+ + + + ++
Sbjct: 84 TFPLTDQVPGGVAAGSAIVILGFGLEDNGG-------LRPILVERLTKGLAVAQAYPAFP 136
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+I G K G E+ L+ G+ + E + T NA ++++++
Sbjct: 137 -----VIVTGGNPKAGKTEAAAMKEWLIGQGISPTRVYTENGAGSTQGNAINTAALMRQN 191
Query: 172 -QGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
G +LV+SA H +RS F G+ +A +
Sbjct: 192 GFGNGAVLVTSADHTRRSVADFLVAGVTLQAVVA 225
>gi|197265831|ref|ZP_03165905.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205357549|ref|ZP_02571321.2| SanA protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|197244086|gb|EDY26706.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205331121|gb|EDZ17885.1| SanA protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|321225905|gb|EFX50959.1| SanA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
Length = 210
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 33/213 (15%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+CF+L+ + + L+ + + ++ +++ G
Sbjct: 1 MACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLGAKPG---------- 49
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+ RI LY + K ++ GD K E L+ GV
Sbjct: 50 ----NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEPSAMQQALMAKGVPE 100
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I + T + + + + ++S A+H +R+ Q +GI+ +
Sbjct: 101 AAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWLAQQYGIDAIGVNAP 157
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
LN + T L+E + + A
Sbjct: 158 DLNKRHG----------TYTRLREKLARVSAVL 180
>gi|194738259|ref|YP_002116179.1| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197301016|ref|ZP_02662980.2| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194713761|gb|ACF92982.1| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197289096|gb|EDY28465.1| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 210
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 33/213 (15%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+CF+L+ + + L+ + + ++ +++ G
Sbjct: 1 MACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLGAKPG---------- 49
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+ RI LY + K ++ GD K E L+ GV
Sbjct: 50 ----NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEPSAMQQALIAKGVPE 100
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I + T + + + + ++S A+H +R+ Q +GI+ +
Sbjct: 101 AAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWLAQQYGIDAIGVNAP 157
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
LN + T L+E + + A
Sbjct: 158 DLNKRHG----------TYTRLREKLARVSAVL 180
>gi|145634406|ref|ZP_01790116.1| SanA [Haemophilus influenzae PittAA]
gi|145268386|gb|EDK08380.1| SanA [Haemophilus influenzae PittAA]
gi|309972997|gb|ADO96198.1| SanA protein [Haemophilus influenzae R2846]
Length = 226
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 68/226 (30%), Gaps = 27/226 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIV 70
+ +L + F L ++ I+ ++ + + F + + ++ +
Sbjct: 2 FTAMLVKKFSPKFTALFRALFYAIFALIILCLLVDRGVSFYVRDKIFINIDELPFRPYAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + + SR+ L + K + + + GD + E
Sbjct: 62 VLGTSKYTASGKPNVYYD------SRLMAAKSLIEQQKVNYLLLS-----GDNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVQAFT---IVSQKFHCERALL 167
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 168 IAQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|320174524|gb|EFW49660.1| SanA protein [Shigella dysenteriae CDC 74-1112]
Length = 191
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 18/147 (12%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E L+ GV I
Sbjct: 31 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEESGMQKALIAKGVPAKVIF 85
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + ++S +H +R+ + + I+ + LN
Sbjct: 86 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYSIDAIGFNAPDLNM 142
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+ L+E + + A
Sbjct: 143 KHGFYTQ----------LREKLARVSA 159
>gi|319776147|ref|YP_004138635.1| SanA [Haemophilus influenzae F3047]
gi|317450738|emb|CBY86958.1| SanA [Haemophilus influenzae F3047]
Length = 226
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 66/225 (29%), Gaps = 25/225 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + F LL++ I+L L + + + + +
Sbjct: 2 FTAMLVKKFSPNFTALFRALLYAI-----FALIILCLLVDRGVSFYVRDKIFTNIDELPF 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+ + + +P+ SR+ L + K + + + GD + E
Sbjct: 57 RPYALVLGTSKYTVSGKPNVYYDSRLMAAKSLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVQAFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 169 AQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|242239729|ref|YP_002987910.1| hypothetical protein Dd703_2304 [Dickeya dadantii Ech703]
gi|242131786|gb|ACS86088.1| protein of unknown function DUF218 [Dickeya dadantii Ech703]
Length = 250
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 52/191 (27%), Gaps = 16/191 (8%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
K F L + + + Q + V+LG
Sbjct: 2 WKRVIFGLFTSLLVLACTAFLLDRCIS--WRTAPYIYDDVQDLPSRQVGVVLGTAKYYRA 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ RI + Y S K + + GD E + L+
Sbjct: 60 ------GVINQYYLFRIQGALNAYNSGKISYLLLS-----GDNSLQSYNEPMTMRRDLIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV+ DI L+ T + + + +++ +H +R+ H GI +
Sbjct: 109 AGVQPVDIVLDYAGFRTLDSIVRTRKVFDTNDFT---IITQRFHCERALFIALHKGIQAQ 165
Query: 201 ASCSDYLNAYY 211
+
Sbjct: 166 CFAVPSPKDIW 176
>gi|31616142|gb|AAP55236.1| unknown [Staphylococcus aureus]
Length = 204
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 16/150 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
V+LG + + + ++ R+ ++ + + II G +G
Sbjct: 45 AYVVLGTSLSKDGNLKS-------ETVKRLNTCLK-----AKKKNEKSYIIVSGGRPVNG 92
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++ V L + V+ + I E +S DT +NA + + + ++++ H +R
Sbjct: 93 KTQANVMKKWLKQHSVKEEFIITEQESEDTLENAIETLKLADRRGINTLSIITNGSHARR 152
Query: 188 SQLYFQHFG----INTKASCSDYLNAYYSI 213
+ L F+ +N D +N +++
Sbjct: 153 ATLIFKKLDKNNKVNEIIIPKDEINTRFTL 182
>gi|262204162|ref|YP_003275370.1| hypothetical protein Gbro_4335 [Gordonia bronchialis DSM 43247]
gi|262087509|gb|ACY23477.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 189
Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 63/175 (36%), Gaps = 19/175 (10%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD---GNIIVLLGNGTTIIPTIPAIRIEP 89
+ + ++ + Y +D + ++LG+ + +R
Sbjct: 1 MVLVALVAVEFVITVSATWMYVASAGRISDGQDPTAADTALVLGSLVSDGVPGDYVRG-- 58
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
R+ + LY + K T II+ G+ E V L + GV DI
Sbjct: 59 ------RLDTVLVLYHAKK-----ITRIINSGNGSAEAGDEPAVMRAYLQQRGVPAGDIV 107
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ LDT + + + + + ++++ +HL+R+ ++ G++ +
Sbjct: 108 DDPAGLDTDASCRRAHDVFGVRR---AVIITQDFHLRRAITLCRNLGVDATGVPA 159
>gi|148827035|ref|YP_001291788.1| hypothetical protein CGSHiGG_01690 [Haemophilus influenzae PittGG]
gi|148718277|gb|ABQ99404.1| SanA [Haemophilus influenzae PittGG]
Length = 226
Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 66/225 (29%), Gaps = 25/225 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + F LL++ I+L L + + + + +
Sbjct: 2 FTAMLVKKFSPKFTALFRALLYAI-----FALIILCLLVDRGVSFYVRDKIFTNIDELPF 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+ + + +P+ SR+ L + K + + + GD + E
Sbjct: 57 RPYALVLGTSKYTVSGKPNVYYDSRLMAAKNLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVSEASMFRDFAGFRTLDSVIRADKIFQVKTFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 169 AQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|317491318|ref|ZP_07949754.1| hypothetical protein HMPREF0864_00517 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920865|gb|EFV42188.1| hypothetical protein HMPREF0864_00517 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 248
Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 62/215 (28%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R++ + + + + + + + Q + V+LG +
Sbjct: 2 WRRLIYGILTVAILLAVTAIGLDRWIS---WKTAPYIYEEVQDLPHRQVGVVLGTAKYVS 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
RI + Y S K + + + GD E + L+
Sbjct: 59 TGTINQYYRY------RIQGALNAYNSNKVNYLLLS-----GDNALESYNEPVTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + +++ +H +R+ H GI
Sbjct: 108 TAGVPSGDIVLDYAGFRTLDSIVRTRKVFDTNDFT---IITQRFHCERALFIALHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ P N + ++E L
Sbjct: 165 QCLAV----------PSPKNMMMIR--IREIGARL 187
>gi|170740433|ref|YP_001769088.1| hypothetical protein M446_2193 [Methylobacterium sp. 4-46]
gi|168194707|gb|ACA16654.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 245
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 36/185 (19%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+L G RI + + L + + T +
Sbjct: 60 QPYARADGIVVLTGG------------------AQRIGDAIDLLAAGFGRRLLITGV--N 99
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ +A L+ V+ D ++ +T NA + ++ + I +V+
Sbjct: 100 ERTSRDEIARLNPGQQHLISCCVDLD-----YRARNTIGNAIETRRWMRENGFRTIAVVT 154
Query: 181 SAYHLKRSQLYFQHF---GINTKASCS---DYLNAYYSIIPLSANFYLTELALKEYIGIL 234
S YH+ R+ L H G + + P SA + EY+ L
Sbjct: 155 SNYHMPRTLLELDHALTSGDRVVPHPVVHEGFDADAWWHHPASARLLAS-----EYVKFL 209
Query: 235 IAYYR 239
+A+ R
Sbjct: 210 VAWLR 214
>gi|309781486|ref|ZP_07676222.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|308919899|gb|EFP65560.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
Length = 168
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 30/179 (16%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++IV+LG +S R+ LY + + +
Sbjct: 19 PRLAHADVIVVLGG-----------------ESGQRVIGAAELYHAGAAPRVFVS----- 56
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++ +L+ +GV + I E S T +NA+ + + Q ++ ILV+
Sbjct: 57 ------GQGDCLLIERRLVMAGVPAERIGHECVSGSTMENARMTRETLAGQQVQSAILVT 110
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S YH R+ F+ + + + S Y L EY+ + R
Sbjct: 111 SWYHTGRALAVFRKA-WPEITWGAQGVFPG-DTLAKSVPVYEAGSILAEYVKRVWYAVR 167
>gi|159486076|ref|XP_001701070.1| hypothetical protein CHLREDRAFT_187568 [Chlamydomonas reinhardtii]
gi|158281569|gb|EDP07324.1| predicted protein [Chlamydomonas reinhardtii]
Length = 246
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 73/251 (29%), Gaps = 46/251 (18%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + + F L + L + L + ++ ++LG
Sbjct: 2 FKIVSVSAAFGALLAVALSPAFLRWLHQTLGSRGP---VVLPDDTVVDVAIVLGYALFRN 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P+ R+ E + LY + ++ + GG K +E+ V
Sbjct: 59 -------GTPTEPLKGRVREGVELYMRGRARNLLFSGAHPGGVVMKR--SEANVMRECAE 109
Query: 140 ------------ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ + E QS T++NA FS + + +++ +V+S +H R
Sbjct: 110 GVLRDSRAGGGAQGLLAAQRWFEEDQSTSTWENAVFSLRICRQKGWRSVAVVTSPFHQIR 169
Query: 188 SQLYFQHF-----------------G-----INTKASCSDYLNAYYSIIPLSANFYLTEL 225
S++ F+ G I + + Y
Sbjct: 170 SEMVFRRLLRDAEAASAEEAASVANGEPPPPIKLYMATASYTPHVGWYAAPLDRLVDAWD 229
Query: 226 ALKEYIGILIA 236
+E ++
Sbjct: 230 WAREVAALVYY 240
>gi|90577511|ref|ZP_01233322.1| hypothetical protein VAS14_10709 [Vibrio angustum S14]
gi|90440597|gb|EAS65777.1| hypothetical protein VAS14_10709 [Vibrio angustum S14]
Length = 365
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 61/178 (34%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D I+ LG R+ T+ + K+ +I+ G
Sbjct: 188 NLDDKGAIITLGYALNPD-------GSMHPILVERLETTLAMAKANPDA-----LIVLTG 235
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E + + L+E G+ +D I E + T NA FSS + K+ ++SS
Sbjct: 236 GVPMNHKTEGKLMADWLIEKGISKDRIIEENYATSTVDNALFSSYALARHHIKHATIISS 295
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q F+ T + Y PL E +GI R
Sbjct: 296 ASHVRRGQTLFEIASWQTGPQSITFDTVSYPDKPLKE-LATPNDG--ELLGIYRDALR 350
>gi|289207668|ref|YP_003459734.1| hypothetical protein TK90_0483 [Thioalkalivibrio sp. K90mix]
gi|288943299|gb|ADC70998.1| protein of unknown function DUF218 [Thioalkalivibrio sp. K90mix]
Length = 224
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 56/180 (31%), Gaps = 18/180 (10%)
Query: 31 LLFSFIGWGII---PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
LL + +I + L + S +++LG P R+
Sbjct: 16 LLTFGLSNLVIVLTAGLSWLALWGRMHLWVRSLDCPGRAPWVIVLGQQLQEGCPGPGYRL 75
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+ +++ GG G +ES L + G+
Sbjct: 76 RLLRTLR------------LLRRDPEARVLLLGGYTSPEGPSESAAGAAFLRQRGIPASR 123
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I E S T +N Q + ++ G +LV+S +HL R+ + G+ +
Sbjct: 124 IFCEEDSRHTLENLQNARDLLVQRTGGRLPRCVLVTSRFHLPRAVAIARGVGLEVCPCPA 183
>gi|255280737|ref|ZP_05345292.1| membrane associated protein [Bryantella formatexigens DSM 14469]
gi|255268674|gb|EET61879.1| membrane associated protein [Bryantella formatexigens DSM 14469]
Length = 260
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 69/189 (36%), Gaps = 34/189 (17%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + D +++++LG +PS R+ + + + ++SG
Sbjct: 95 KPQADMDVLIVLGAQVKGE--------QPSRALLRRLEAA----ERYLKENPDTVAVLSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----- 175
G + E+ G++ + LE S T +N FS+ I G++
Sbjct: 143 GKGDGEDITEAECMYRYFTGQGIDASRLILEDSSTSTAENLTFSAGKIAEYFGEDGGMSR 202
Query: 176 -IILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
L+S+ +H+ R++L + G +++ + SD+ ++E+
Sbjct: 203 KTGLLSNNFHVYRARLLAEKMGYTDVHSVPAASDWR-------------LQIHYLVREFF 249
Query: 232 GILIAYYRG 240
+ G
Sbjct: 250 ALCKEKAMG 258
>gi|49476199|ref|YP_034240.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
gi|49239007|emb|CAF28307.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
Length = 230
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 36/192 (18%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + F ++LF G+ + L P + I++L G
Sbjct: 40 LFRYFPPTAFFLLMIVLFFCAGFVVFSEK---------TEQLTPPSPLPKADAIIVLTGG 90
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
RI + L + + + + + S
Sbjct: 91 EN------------------RIETGLDLLQQGLGSRLLISGVNTT--TTLKRFMHSTHIT 130
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+L V+ ++++T NA+ S+ IK K + +V+ YH+ RS ++
Sbjct: 131 PQLFACCVDI-----GHKAINTKGNAEESAVWIKKHHYKTVYIVTHDYHMWRSMRELKYL 185
Query: 196 --GINTKASCSD 205
IN A
Sbjct: 186 MPDINFIAYPVK 197
>gi|241663925|ref|YP_002982285.1| hypothetical protein Rpic12D_2339 [Ralstonia pickettii 12D]
gi|240865952|gb|ACS63613.1| protein of unknown function DUF218 [Ralstonia pickettii 12D]
Length = 190
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 30/209 (14%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L G I+ L + L ++IV+LG
Sbjct: 11 VLAWIGGCAIVAMAFSAVLVCGAKSWLREEPRLAHADVIVVLGG---------------- 54
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+S R+ LY + + + G + ++ +L+ +GV I
Sbjct: 55 -ESGQRVIGAAELYHAGAAPRVFVS-----------GQGDCLLIERRLVMAGVPAGRIGH 102
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E S T +NA+ + + Q ++ ILV+S YH R+ F+ + +
Sbjct: 103 ECVSGSTMENARMTRQTLAGQQVQSAILVTSWYHTGRALAVFRKV-WPEITWGAQGVFPG 161
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYR 239
+ S Y L EY+ R
Sbjct: 162 -DTLAKSVPVYEAGSILAEYVKRAWYAVR 189
>gi|157369809|ref|YP_001477798.1| hypothetical protein Spro_1566 [Serratia proteamaculans 568]
gi|157321573|gb|ABV40670.1| protein of unknown function DUF218 [Serratia proteamaculans 568]
Length = 247
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/215 (12%), Positives = 60/215 (27%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ + + + + + Q + V+LG
Sbjct: 2 WKRLIIGLFVIAALLMLSAIALDRWIS---WKTAPFVYDELQGLPHRQVGVVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + GD + E + L+
Sbjct: 59 TGVINQYYRY------RIQGAINAYNSGKVKYLLLS-----GDNAQQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 AAGVAPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + ++E L
Sbjct: 165 QCYAVPSPK------------DMMTVRVREIFARL 187
>gi|27367521|ref|NP_763048.1| hypothetical protein VV2_1137 [Vibrio vulnificus CMCP6]
gi|27359093|gb|AAO08038.1|AE016812_20 Uncharacterized conserved protein [Vibrio vulnificus CMCP6]
Length = 361
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 70/186 (37%), Gaps = 15/186 (8%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ + + IV LG ++ I R+ T+ + K+ +
Sbjct: 176 PLKEKATRQLGRNDAIVTLGYALNPDGSMHDI-------LIERLETTLTMAKANPEA--- 225
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+II G ++ E + + L+E G+ + I E + T NA FS+ +
Sbjct: 226 --LIILTGGVPQNHKTEGKLMADWLIERGISANRIIEENYATSTVDNALFSAYALARHGV 283
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
K+ ++SSA H++R Q F+ T + Y PL+ + + E +GI
Sbjct: 284 KHATIISSASHVRRGQTLFEIATWQTGPRNITFDTVAYPDKPLNELKHASSG---ELLGI 340
Query: 234 LIAYYR 239
R
Sbjct: 341 YRDALR 346
>gi|238749939|ref|ZP_04611443.1| hypothetical protein yrohd0001_37080 [Yersinia rohdei ATCC 43380]
gi|238711868|gb|EEQ04082.1| hypothetical protein yrohd0001_37080 [Yersinia rohdei ATCC 43380]
Length = 259
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 59/215 (27%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ + + + + + Q + V+LG
Sbjct: 2 WKRLIISLIAIAGLLVVSAIALDRWIS---WKTAPFIYDELQGLPHRQVGVVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + GD E + L+
Sbjct: 59 TGGINQFYQY------RIQGAINAYNSGKVSYLLLS-----GDNALQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 AAGVAPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAMHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ P N ++E L
Sbjct: 165 QCFAV----------PSPKNMLNVR--VREIFARL 187
>gi|154252045|ref|YP_001412869.1| hypothetical protein Plav_1593 [Parvibaculum lavamentivorans DS-1]
gi|154155995|gb|ABS63212.1| protein of unknown function DUF218 [Parvibaculum lavamentivorans
DS-1]
Length = 208
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 29/217 (13%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + + + + + L + P+ P + IV L G
Sbjct: 8 RHRTGRRTLRILVGFTALLAAAYVAGFFLFTAELERIPPVRVPV----ADGIVALTGG-- 61
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
RI +L + K + + T +
Sbjct: 62 ----------------PDRITAAYKLLQEGKGNRLLITGVHPDVSVASLKEMVPGGSAKF 105
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ V+ + + +T NA ++ ++ ++IILV+S YHL R++L
Sbjct: 106 --DCCVDLGHM-----AENTIGNATETAEWVRERNYRSIILVTSTYHLPRARLELARAMP 158
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + S + A T L + EY L
Sbjct: 159 DVEISAFPVFQDTLHLDGWWAYPGTTRLLISEYTKYL 195
>gi|304397472|ref|ZP_07379350.1| protein of unknown function DUF218 [Pantoea sp. aB]
gi|304355090|gb|EFM19459.1| protein of unknown function DUF218 [Pantoea sp. aB]
Length = 239
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 58/185 (31%), Gaps = 17/185 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++++ F++L + + + + + V+LG
Sbjct: 2 LKRVSIGLLFIILLMMATALCLDRWIS---WKTAPFIYENVASLPHRQVGVVLGTA---- 54
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + + GD E + L+
Sbjct: 55 --KYYRTGVINQYYLYRIQGALNAYNSGKVNYLLLS-----GDNALQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
++GV+ DI L+ T + + + I+++ +H +R+ GI
Sbjct: 108 KAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALQLGIQA 164
Query: 200 KASCS 204
+
Sbjct: 165 QCYAV 169
>gi|84385174|ref|ZP_00988206.1| hypothetical protein V12B01_15926 [Vibrio splendidus 12B01]
gi|84379771|gb|EAP96622.1| hypothetical protein V12B01_15926 [Vibrio splendidus 12B01]
Length = 365
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 64/175 (36%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D IV LG ++ I R+ T+ + K+ I+ G
Sbjct: 191 DHGAIVTLGYALNPDGSMHEI-------LIERLETTLAMSKANPDAM-----IVLTGGVP 238
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
K+ E + + L+ GV +D I E + T NA FSS + K+ ++SSA H
Sbjct: 239 KNHKTEGKLMADWLISKGVSKDRIIEENYATSTVGNALFSSYALARHDIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL + E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQGITFDTVSYPDKPLEDLKKASSG---ELLGIYRDALR 350
>gi|17989186|ref|NP_541819.1| hypothetical protein BMEII0841 [Brucella melitensis bv. 1 str. 16M]
gi|17985041|gb|AAL54083.1| hypothetical protein BMEII0841 [Brucella melitensis bv. 1 str. 16M]
Length = 180
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 22/170 (12%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I P R + +L+K + + GD +
Sbjct: 1 MQDDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA---TGDGDCLLN--------K 49
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ GV I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 50 HIMMAKGVPPSAILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 109
Query: 196 ----GINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +D + P+ E +KEY + G
Sbjct: 110 CPQMHFTSSPVADADMPGGFPGTPPV------IEHVVKEYAKLGWYLISG 153
>gi|266621742|ref|ZP_06114677.1| putative membrane protein [Clostridium hathewayi DSM 13479]
gi|288866566|gb|EFC98864.1| putative membrane protein [Clostridium hathewayi DSM 13479]
Length = 281
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 53/263 (20%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ +FL + + + + R ++ ++ F G + + + + R
Sbjct: 46 ACLFLALGWEYYMKHKDRVPLWLPVSVITFCCTGILVFSMVEILIFTGAASR------DA 99
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + +++LG S SR+ + + + +++SGG
Sbjct: 100 SNLDYLIVLGARVKEDG--------LSKSLKSRLDKAIDYLEENPGTV----LVLSGGQG 147
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----------- 172
+ ++E+ + L+ +GV + LET+S T +N +S I+ Q
Sbjct: 148 EDEPVSEAAAMRDYLVFNGVSERQLILETRSFSTVENIAYSRIAIEEDQAERKARHARSD 207
Query: 173 --------------GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
I +++S +H+ R++ + +GI Y I S
Sbjct: 208 IIMEPGTYEEISDKPIRIGVLTSDFHVFRAEQIAKKWGIP----------DIYGISSESD 257
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
L ++E IL GN
Sbjct: 258 PVLLVHFCVRECAAILKDKLVGN 280
>gi|27376503|ref|NP_768032.1| hypothetical protein blr1392 [Bradyrhizobium japonicum USDA 110]
gi|27349644|dbj|BAC46657.1| blr1392 [Bradyrhizobium japonicum USDA 110]
Length = 234
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 7/165 (4%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G I P A I SR+ + M L + + + +
Sbjct: 45 GAEIAPDRKADGIVVLTGGSSRVSDAMELLAAGYGRRLLISGVHPTSTASDISRTLPEN- 103
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ V+ D +L T NA + + + K++I+V+S YH+ R+ + F H
Sbjct: 104 -QSFMTCCVDLDR-----TALSTRGNAAEARRWAQARRFKSLIVVTSNYHMPRALVEFSH 157
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
T + + P A+ L L EY+ + A R
Sbjct: 158 AMPETILIPFAVVGDKWREEPWWASASTLRLLLSEYVKYIAAEVR 202
>gi|145630892|ref|ZP_01786669.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae R3021]
gi|144983552|gb|EDJ91020.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae R3021]
Length = 226
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 70/225 (31%), Gaps = 25/225 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + + F LL++ I+ ++ + + Y R + +
Sbjct: 2 FTAMLVKKLSPKFTALFCALLYAIFALIILCLLVDRGV-SFYVRDKIFTNIYELPFRPYA 60
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
L GT + + +P+ SR+ L + K + + + GD + E
Sbjct: 61 LVLGT----SKYTVNGKPNVYYDSRLMAAKSLIEQQKVNYLLLS-----GDNRTLQYNEP 111
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV + + T + + + + +VS +H +R+ L
Sbjct: 112 RAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVQAFT---IVSQKFHCERALLI 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q I+ + ++E + A
Sbjct: 169 AQAHNIDAICFVAKQPE------------LHFSTQIREVFARIKA 201
>gi|86145789|ref|ZP_01064118.1| hypothetical protein MED222_04000 [Vibrio sp. MED222]
gi|85836488|gb|EAQ54617.1| hypothetical protein MED222_04000 [Vibrio sp. MED222]
Length = 365
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 64/175 (36%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D IV LG ++ I R+ T+ + K+ I+ G
Sbjct: 191 DHGAIVTLGYALNPDGSMHEI-------LIERLETTLAMSKANPDAM-----IVLTGGVP 238
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
K+ E + + L+ GV +D I E + T NA FSS + K+ ++SSA H
Sbjct: 239 KNHKTEGKLMADWLISKGVSKDRIIEENYATSTVGNALFSSYALARHDIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL + E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQGITFDTVSYPDKPLEDLKKASSG---ELLGIYRDALR 350
>gi|289808951|ref|ZP_06539580.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 203
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 33/213 (15%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+CF+L+ + + L+ + + ++ +++ G
Sbjct: 1 MACFLLVAAGVALFY-SNWLIVNASQHLTWNDIQTVPARNVGLVLGAKPG---------- 49
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+ RI LY + K ++ GD K E L+ GV
Sbjct: 50 ----NRYFTRRINTAAALYHAGKVKW-----LLVSGDNGKKEYDEPSAMQQALIAKGVPE 100
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I + T + + + + ++S A+H +R+ Q +GI+ +
Sbjct: 101 AAIFCDYAGFSTLDSVVRARKVFGESRIT---IISQAFHNQRAIWLAQQYGIDAIGVNAP 157
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
LN + T L+E + + A
Sbjct: 158 DLNKRHG----------TYTRLREKLARVSAVL 180
>gi|37677322|ref|NP_937718.1| hypothetical protein VVA1662 [Vibrio vulnificus YJ016]
gi|37201868|dbj|BAC97688.1| uncharacterized conserved protein [Vibrio vulnificus YJ016]
Length = 361
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ + + IV LG ++ I R+ T+ + K+ +
Sbjct: 176 PLKEKATRQLGSNDAIVTLGYALNPDGSMHDI-------LIERLETTLAMAKANPEA--- 225
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+II G ++ E + + L+E G+ + I E + T NA FS+ +
Sbjct: 226 --LIILTGGVPQNHKTEGKLMADWLIERGISANRIIEENYATSTVDNALFSAYALARHGV 283
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
K+ ++SSA H++R Q F+ T + Y PL+ + E +GI
Sbjct: 284 KHATIISSASHVRRGQTLFEIATWQTGPRNITFDTVAYPDKPLNELKQASSG---ELLGI 340
Query: 234 LIAYYR 239
R
Sbjct: 341 YRDALR 346
>gi|291286558|ref|YP_003503374.1| hypothetical protein Dacet_0629 [Denitrovibrio acetiphilus DSM
12809]
gi|290883718|gb|ADD67418.1| protein of unknown function DUF218 [Denitrovibrio acetiphilus DSM
12809]
Length = 190
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 59/144 (40%), Gaps = 18/144 (12%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ I++L + + ++ R+ + + K M I G D +
Sbjct: 2 KYSAIIVL-------ANLMDREGFLNEETSRRMDLAIEEFNKDKAPWM----ITCGWDYR 50
Query: 125 KHG-LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNIILVSSA 182
+ + E + D I +E S DT +A F+ ++++KN + K I++V+S
Sbjct: 51 DDSSIKIADAMKKYAKEKNIPVDRIIVELNSRDTVGDAIFTKNNIVKNKEWKKILVVTSD 110
Query: 183 YHLKRSQLYFQ-----HFGINTKA 201
YH+ R++ F+ + I+
Sbjct: 111 YHVDRTRKIFEFVYGDQYHIDVIG 134
>gi|227503142|ref|ZP_03933191.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|227076203|gb|EEI14166.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
Length = 199
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 50/170 (29%), Gaps = 23/170 (13%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+V+LG PS R+ L S +I GG
Sbjct: 5 VKYVVVLGTA--------QYDGRPSRILAGRLRHAGELATS-----RGLPVITVGGQLPG 51
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ E+ V + L E + + LDT ++ + I+V+ H
Sbjct: 52 DRVTEAGVARDYLREH-FPELQVSAVEEGLDTRESLAAVI---DAHGLADAIIVTDPLHR 107
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
R+ + + G+N S + Y A P E G+
Sbjct: 108 LRTWVIAKQEGLNASVSGTPYYPARRFSKPWWRYLA------HECGGLFY 151
>gi|320159372|ref|YP_004191750.1| hypothetical protein VVM_03209 [Vibrio vulnificus MO6-24/O]
gi|319934684|gb|ADV89547.1| uncharacterized conserved protein [Vibrio vulnificus MO6-24/O]
Length = 361
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ + + IV LG ++ I R+ T+ + K+ +
Sbjct: 176 PLKEKATRQLGSNDAIVTLGYALNPDGSMHDI-------LIERLETTLAMAKANPEA--- 225
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+II G ++ E + + L+E G+ + I E + T NA FS+ +
Sbjct: 226 --LIILTGGVPQNHKTEGKLMADWLIERGISANRIIEENYATSTVDNALFSAYALARHGV 283
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
K+ ++SSA H++R Q F+ T + Y PL+ + E +GI
Sbjct: 284 KHATIISSASHVRRGQTLFEIATWQTGPRNITFDTVAYPDKPLNELKQASSG---ELLGI 340
Query: 234 LIAYYR 239
R
Sbjct: 341 YRDALR 346
>gi|225574945|ref|ZP_03783555.1| hypothetical protein RUMHYD_03024 [Blautia hydrogenotrophica DSM
10507]
gi|225037792|gb|EEG48038.1| hypothetical protein RUMHYD_03024 [Blautia hydrogenotrophica DSM
10507]
Length = 161
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 73/179 (40%), Gaps = 23/179 (12%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++ + +++LG S R+ + + + ++SGG
Sbjct: 5 PENLDYLIVLGAHVNG--------TRLSRALRFRVEKAEEYLRENPRTLA----VLSGGR 52
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ + LL G+ER+ + LE +S+ T +N +FS ++ + + + I +V++
Sbjct: 53 GVDEKISEAKAMADYLLAHGIERERLLLEERSVSTAENLRFSLELLPDRK-QKIGIVTNN 111
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+H+ RS + G + + ++ L + +E + I+ GN
Sbjct: 112 FHIFRSVAIGRKLGCE----------KIWGLAAPYPSWKLLWYSFREVLAIVKDKIVGN 160
>gi|333030317|ref|ZP_08458378.1| protein of unknown function DUF218 [Bacteroides coprosuis DSM
18011]
gi|332740914|gb|EGJ71396.1| protein of unknown function DUF218 [Bacteroides coprosuis DSM
18011]
Length = 213
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 52/170 (30%), Gaps = 12/170 (7%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
L +L SY + V G + + P+ RI L
Sbjct: 23 WLCSYLIVSYAEDRTYSSIYDIPHNRV----GVILGTSKSLRTGAPNPYFIYRIEAAAAL 78
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Y + K ++ GD E L+ G+ D++ ++ L T +
Sbjct: 79 YHAGKIDK-----LVISGDNSDKYYNEPRDMKKALMAKGISEDNLFIDAAGLRTLDSMVR 133
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
+ + ++S +H +R+ + F ++ ++ +
Sbjct: 134 MKEIFQQ---TTFTVISQKFHNERAIYLGRAFSLDVIGFNAEDVGVVRGF 180
>gi|254446112|ref|ZP_05059588.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
gi|198260420|gb|EDY84728.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
Length = 172
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 8/127 (6%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+IV+LG + + R + L+K+ + T +
Sbjct: 8 LIVVLG-------SPNGDDGRLFGVAEERCVAAVGLWKAEPDCRILLTGGFGE-HFNRTE 59
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
A + +L+E G+ + SL+T ++A + +I K ++V+S YHL R
Sbjct: 60 TAHAEYLKRRLVELGIPGNRFLEFALSLNTLEDASKAKPIIAESGAKRCVVVTSDYHLDR 119
Query: 188 SQLYFQH 194
+ F+
Sbjct: 120 ASYVFRR 126
>gi|329847903|ref|ZP_08262931.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
gi|328842966|gb|EGF92535.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
Length = 220
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 40/218 (18%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++L G + +++ + + ++ + IV+L +
Sbjct: 2 RSLIAFLVVVLLWAAGLLVFADRVIES--------TPAIEPEEPADAIVVLTGASD---- 49
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
R+ E MRL + K + + + D ++ L + + +L E
Sbjct: 50 -------------MRLKEGMRLLERRKGERLFISGV--NRDVKRPELMDVTEGSKRLYEC 94
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGI 197
V+ Q+ +T QNA+ + + +I+V+S YH+ RS L +
Sbjct: 95 CVDL-----GYQAENTVQNAREIAEWARGHDFDTLIVVTSDYHMPRSLLELKADMPDAHF 149
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + L+A L + EY L
Sbjct: 150 ISYPVPTADLSARDWWKSGKGA----RLIVLEYCKYLA 183
>gi|148652582|ref|YP_001279675.1| hypothetical protein PsycPRwf_0773 [Psychrobacter sp. PRwf-1]
gi|148571666|gb|ABQ93725.1| protein of unknown function DUF218 [Psychrobacter sp. PRwf-1]
Length = 300
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 89/272 (32%), Gaps = 64/272 (23%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGII--PTILLKHLQFS----------YQRP 56
I++ LL S+ F + + I ++ L +
Sbjct: 16 IIAVIMLLMLSVASFFTPLFSTIGLWVLNHLPIPEANHAMRPLIYDLNANQAESATAPTL 75
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIR------------------------------ 86
L+ + + + V+LG G T P +
Sbjct: 76 PLNWRSEHEPTAYVVLGGGLTEADHKPNRQKSAIANKGSDTHVANRPPSSPAQKNTPQLS 135
Query: 87 ---IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
I + S +R+ + YK II++G E+ + LL G+
Sbjct: 136 PNSIVLNQYSLNRMQTVIWHYKKKP-----LPIILTG--------VEAPWMRDWLLNYGI 182
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ +I E S++T +NA+F++ + ++ L++ AYH+ R++ F I+T
Sbjct: 183 D--NIITENASMNTCENARFTAK---RLNLSDVYLITDAYHMTRTRRQFALNNIHTSPIV 237
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ L S + N + L E
Sbjct: 238 AP-LPMQKSWLHPKDNAQHSRRTLYELAAYAR 268
>gi|229145780|ref|ZP_04274161.1| hypothetical protein bcere0012_29310 [Bacillus cereus BDRD-ST24]
gi|228637761|gb|EEK94210.1| hypothetical protein bcere0012_29310 [Bacillus cereus BDRD-ST24]
Length = 125
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV--SSAYHLKRSQLY 191
+ + + ++ E +S T+QN FS ++++++G + ++ +H+ R+ LY
Sbjct: 1 MQEYAVNNRIPLENTIKEDRSTTTYQNMLFSKRIMESLKGTQYNCIFSTNNFHVFRAGLY 60
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ G+N++ S +A +Y ++EYI I +
Sbjct: 61 AKIVGLNSQGIGS-----------KTAFYYWPNAMIREYIAIFV 93
>gi|256112323|ref|ZP_05453244.1| hypothetical protein Bmelb3E_06514 [Brucella melitensis bv. 3 str.
Ether]
Length = 208
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 70/227 (30%), Gaps = 40/227 (17%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ + + ++ G+ + + + P + IV+L G
Sbjct: 2 RRLQPVSIILFLAVIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTGG-- 50
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
SR+ + L K + + + + + L + +
Sbjct: 51 ----------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRATHADKS 92
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF--QHF 195
L ++ D +L+T NA S I+ +I+V++ YH+ RS L +
Sbjct: 93 LFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMK 147
Query: 196 GINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + S + + EY+ L A R
Sbjct: 148 DVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVRLG 191
>gi|22125571|ref|NP_668994.1| hypothetical protein y1676 [Yersinia pestis KIM 10]
gi|45442116|ref|NP_993655.1| hypothetical protein YP_2326 [Yersinia pestis biovar Microtus str.
91001]
gi|51596866|ref|YP_071057.1| hypothetical protein YPTB2547 [Yersinia pseudotuberculosis IP
32953]
gi|108807998|ref|YP_651914.1| hypothetical protein YPA_2003 [Yersinia pestis Antiqua]
gi|108812268|ref|YP_648035.1| hypothetical protein YPN_2106 [Yersinia pestis Nepal516]
gi|145599203|ref|YP_001163279.1| hypothetical protein YPDSF_1923 [Yersinia pestis Pestoides F]
gi|149365580|ref|ZP_01887615.1| putative exported protein [Yersinia pestis CA88-4125]
gi|153948076|ref|YP_001400474.1| hypothetical protein YpsIP31758_1496 [Yersinia pseudotuberculosis
IP 31758]
gi|162421029|ref|YP_001606261.1| hypothetical protein YpAngola_A1772 [Yersinia pestis Angola]
gi|165925576|ref|ZP_02221408.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937616|ref|ZP_02226178.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008093|ref|ZP_02228991.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213796|ref|ZP_02239831.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398638|ref|ZP_02304162.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422234|ref|ZP_02313987.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426954|ref|ZP_02318707.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167466398|ref|ZP_02331102.1| hypothetical protein YpesF_00560 [Yersinia pestis FV-1]
gi|170023842|ref|YP_001720347.1| hypothetical protein YPK_1601 [Yersinia pseudotuberculosis YPIII]
gi|186895947|ref|YP_001873059.1| hypothetical protein YPTS_2642 [Yersinia pseudotuberculosis PB1/+]
gi|218929600|ref|YP_002347475.1| hypothetical protein YPO2511 [Yersinia pestis CO92]
gi|229895244|ref|ZP_04510418.1| putative exported protein [Yersinia pestis Pestoides A]
gi|229898605|ref|ZP_04513750.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902604|ref|ZP_04517721.1| putative exported protein [Yersinia pestis Nepal516]
gi|270490215|ref|ZP_06207289.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27]
gi|294504263|ref|YP_003568325.1| hypothetical protein YPZ3_2153 [Yersinia pestis Z176003]
gi|21958474|gb|AAM85245.1|AE013770_11 hypothetical [Yersinia pestis KIM 10]
gi|45436979|gb|AAS62532.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51590148|emb|CAH21785.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|108775916|gb|ABG18435.1| hypothetical protein YPN_2106 [Yersinia pestis Nepal516]
gi|108779911|gb|ABG13969.1| hypothetical protein YPA_2003 [Yersinia pestis Antiqua]
gi|115348211|emb|CAL21139.1| putative exported protein [Yersinia pestis CO92]
gi|145210899|gb|ABP40306.1| hypothetical protein YPDSF_1923 [Yersinia pestis Pestoides F]
gi|149291993|gb|EDM42067.1| putative exported protein [Yersinia pestis CA88-4125]
gi|152959571|gb|ABS47032.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|162353844|gb|ABX87792.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165914366|gb|EDR32981.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922685|gb|EDR39836.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992475|gb|EDR44776.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204970|gb|EDR49450.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958740|gb|EDR55761.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051142|gb|EDR62550.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054056|gb|EDR63884.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169750376|gb|ACA67894.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
YPIII]
gi|186698973|gb|ACC89602.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
PB1/+]
gi|229680051|gb|EEO76150.1| putative exported protein [Yersinia pestis Nepal516]
gi|229688153|gb|EEO80224.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229701730|gb|EEO89755.1| putative exported protein [Yersinia pestis Pestoides A]
gi|262362382|gb|ACY59103.1| hypothetical protein YPD4_2196 [Yersinia pestis D106004]
gi|262366310|gb|ACY62867.1| hypothetical protein YPD8_2190 [Yersinia pestis D182038]
gi|270338719|gb|EFA49496.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27]
gi|294354722|gb|ADE65063.1| hypothetical protein YPZ3_2153 [Yersinia pestis Z176003]
gi|320014659|gb|ADV98230.1| putative exported protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 375
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 13/173 (7%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ L + + N IV LG T+ + I+ R+ +T+ + +
Sbjct: 190 AQQLAQLKATQGENAIVTLGYALNPDGTMNDVLIQ-------RLEKTLEIAQQLPDA--- 239
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+II G ++ E + + L++ G++ + I + + T +NA +S + +
Sbjct: 240 --LIIVTGGVPQNNQTEGKLMADWLIKKGIKPERIYQDNYARSTVENALYSRYALAKHRI 297
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
KN I++SS H++R+ F + ++L PLS T A
Sbjct: 298 KNAIIISSGSHVRRADALFTIASWESGPHDINFLTIAALDKPLSE-LQKTSPA 349
>gi|124006301|ref|ZP_01691136.1| SanA protein [Microscilla marina ATCC 23134]
gi|123988225|gb|EAY27883.1| SanA protein [Microscilla marina ATCC 23134]
Length = 218
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 18/164 (10%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + + RI + LYK+ K I+ GD + E
Sbjct: 53 GLVLGTSKWLSDGRVNLYFKYRIEAAVALYKAKK-----IKYILVSGDNRFDYYNEPREM 107
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+N L+ SGV + I L+ T + S + ++S +H KR+ +
Sbjct: 108 HNALVASGVPSEVIVLDYAGFRTLDSVVRSKKVFGQQAIT---IISQPFHNKRALFIASN 164
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+G+ A + +N Y L+E + + +
Sbjct: 165 YGMKAVAFNAKDVNLYMGFKTQ----------LREKLARVKVFL 198
>gi|322419180|ref|YP_004198403.1| hypothetical protein GM18_1662 [Geobacter sp. M18]
gi|320125567|gb|ADW13127.1| protein of unknown function DUF218 [Geobacter sp. M18]
Length = 200
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 68/228 (29%), Gaps = 42/228 (18%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ F+ L + + IL L K G+ +L G T
Sbjct: 2 RLRILAAVLAGFLFLVVLPSFPRVRAILAAPL--------TVTDSKAQGDACYVLAGGET 53
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ---KHGLAESIVY 134
+ R+ L + ++ S Y
Sbjct: 54 VW---------------ERLNAAADLVHLGRVPRIYLMNDTSRDQYSIRAGESRTRIQWY 98
Query: 135 NNKLLESGVERDDIKLETQSLDTF--QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L+ GV D I ++ ++ + + + +++VSSA H++R+ L F
Sbjct: 99 VDYLVWRGVPADRISFIPKTKGLLGTRSEARAFAAQLPKGARQVVIVSSAPHMRRALLTF 158
Query: 193 QH---FGINTKAS-CSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q + +D + PL EY+ +L+
Sbjct: 159 QRILPAQVRVVPYAATDLAGSQELYHPLWV----------EYLKLLVY 196
>gi|229838045|ref|ZP_04458204.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229694411|gb|EEO84458.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
Length = 375
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 13/173 (7%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ L + + N IV LG T+ + I+ R+ +T+ + +
Sbjct: 190 AQQLAQLKATQGENAIVTLGYALNPDGTMNDVLIQ-------RLEKTLEIAQQLPDA--- 239
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+II G ++ E + + L++ G++ + I + + T +NA +S + +
Sbjct: 240 --LIIVTGGVPQNNQTEGKLMADWLIKKGIKPERIYQDNYARSTVENALYSRYALAKHRI 297
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
KN I++SS H++R+ F + ++L PLS T A
Sbjct: 298 KNAIIISSGSHVRRADALFTIASWESGPHDINFLTIAALDKPLSE-LQKTSPA 349
>gi|116490285|ref|YP_809829.1| hypothetical protein OEOE_0171 [Oenococcus oeni PSU-1]
gi|290889671|ref|ZP_06552760.1| hypothetical protein AWRIB429_0150 [Oenococcus oeni AWRIB429]
gi|116091010|gb|ABJ56164.1| hypothetical protein OEOE_0171 [Oenococcus oeni PSU-1]
gi|290480668|gb|EFD89303.1| hypothetical protein AWRIB429_0150 [Oenococcus oeni AWRIB429]
Length = 365
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 85/241 (35%), Gaps = 30/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + L++ + I ++ F+ F + + + + + + L
Sbjct: 120 IIFPLLCLMILFKLFKISLPPVIGYLFAFIPAFVIYLGFVFTNFITQTIIVNLKGKQL-L 178
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + + LG G S SR+ T+ + + +I+SG
Sbjct: 179 KNRQSFDYSITLGAGLIQGK-------RVSKNLESRLQRTLDFA----KRHHNPKLIMSG 227
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----- 175
G ++E+ +++ + LE +S +T +N Q S+ I Q N
Sbjct: 228 GQGYDEKISEAKAMRTWIIKHNYSPSKVILEDRSTNTKENFQKSAEKILEDQKTNNLGKQ 287
Query: 176 --IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
++ V+++YHL R+ + + Y ++ +E+ +
Sbjct: 288 IRMVFVTNSYHLTRANYIAFSNNLKIFGIPAKTTRNYLALG-----------WFREFAAM 336
Query: 234 L 234
L
Sbjct: 337 L 337
>gi|269138516|ref|YP_003295216.1| hypothetical protein ETAE_1160 [Edwardsiella tarda EIB202]
gi|267984176|gb|ACY84005.1| hypothetical protein ETAE_1160 [Edwardsiella tarda EIB202]
gi|304558537|gb|ADM41201.1| SanA [Edwardsiella tarda FL6-60]
Length = 244
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 17/186 (9%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+++ + + + S + + + + Q + V+LG +
Sbjct: 2 WWKRLIYGLIGVGILSGLAALALDRWIS---WVTAPYIYEDVQDLPRREVGVVLGTAKYV 58
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P + RI + Y S K + + GD E + L
Sbjct: 59 APGVINQYYRY------RIQGALNAYNSNKVSYLLLS-----GDNALQSYNEPVTMRRDL 107
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ +GV DI L+ T + + + +++ +H +R+ H GI
Sbjct: 108 IAAGVPNGDIVLDYAGFRTLDSIVRARRVFDTDDFT---IITQRFHCERALFIAMHLGIQ 164
Query: 199 TKASCS 204
+
Sbjct: 165 AQCLAV 170
>gi|23502843|ref|NP_698970.1| hypothetical protein BR1995 [Brucella suis 1330]
gi|62290842|ref|YP_222635.1| hypothetical protein BruAb1_1970 [Brucella abortus bv. 1 str.
9-941]
gi|82700754|ref|YP_415328.1| hypothetical protein BAB1_1995 [Brucella melitensis biovar Abortus
2308]
gi|254705003|ref|ZP_05166831.1| hypothetical protein Bsuib36_14000 [Brucella suis bv. 3 str. 686]
gi|256370397|ref|YP_003107908.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294851231|ref|ZP_06791904.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|23348869|gb|AAN30885.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196974|gb|AAX75274.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616855|emb|CAJ11951.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|256000560|gb|ACU48959.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294819820|gb|EFG36819.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|326539710|gb|ADZ87925.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 212
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 40/230 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 3 RILRRLQPVSIILFLAVIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTG 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ + L K + + + + + L +
Sbjct: 54 G------------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRATHA 93
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-- 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 94 DKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSS 148
Query: 193 QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + S + + EY+ L A R
Sbjct: 149 RMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVRLG 195
>gi|302384409|ref|YP_003820232.1| hypothetical protein Bresu_3303 [Brevundimonas subvibrioides ATCC
15264]
gi|302195037|gb|ADL02609.1| protein of unknown function DUF218 [Brevundimonas subvibrioides
ATCC 15264]
Length = 208
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 64/216 (29%), Gaps = 37/216 (17%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K + + L +G + R L + IV L
Sbjct: 2 KFLALVGIVGLIWLVGLFAFADRV---------RNLTPADEPARADGIVALTG------- 45
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
S R+ +RL + K + + + ++ L E +N+L
Sbjct: 46 ----------PSAERVNAAVRLLEQDKGERVLISGVNRE--VRRQELRELTPGSNRLFNC 93
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINT 199
V+ ++ DT NAQ ++ + ++I+V+S YH+ RS L + G+
Sbjct: 94 CVDL-----GFEAEDTGGNAQEIAAWAGSKNYTSLIVVTSDYHMPRSLLEIRSAAPGLEL 148
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
EY+ L
Sbjct: 149 TPYAVS--TPSLDNSRWWRAAVTARRMTLEYMKYLA 182
>gi|296127236|ref|YP_003634488.1| hypothetical protein Bmur_2215 [Brachyspira murdochii DSM 12563]
gi|296019052|gb|ADG72289.1| protein of unknown function DUF218 [Brachyspira murdochii DSM
12563]
Length = 268
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 14/148 (9%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
S + ++ ++LG + + + R+ LYKS K
Sbjct: 77 YSSIEDIPYNDVALVLGTSKYLHNGKINMYFKF------RMDAAYELYKSGK-----VKY 125
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+ GD + E L++ GV + I L+ T + ++ + N
Sbjct: 126 ILVSGDNRYRSYNEPRQMRLDLIKLGVNKKHIFLDFAGFRTRDSIIRANKVFD---LTNF 182
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCS 204
+VS +H +R+ L + I+ A +
Sbjct: 183 TIVSQPFHNERAILIARQKKIDAIAYNA 210
>gi|328541756|ref|YP_004301865.1| hypothetical protein SL003B_0132 [polymorphum gilvum SL003B-26A1]
gi|326411508|gb|ADZ68571.1| Hypothetical transmembrane protein [Polymorphum gilvum SL003B-26A1]
Length = 196
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 77/215 (35%), Gaps = 35/215 (16%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L + G++ + + L F+ + + + IV+L G
Sbjct: 2 LLAGLAVTVGLVAGLGISFLLFAQSVVSIRAPEEASADGIVVLTGG-------------- 47
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
RI + L + + + + + + E + L V+ D
Sbjct: 48 ----QDRIERAVGLLQEERARRLLISGVYPA--TTDRQIVERTSGDLPLFRCCVDLDR-- 99
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCS--- 204
++L+T NA +++ + +++LV+SAYHL R+ L + +
Sbjct: 100 ---KALNTVGNAVETAAWARTHGFSSLLLVTSAYHLPRAALELKAVMPELELVPYPVFAE 156
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
D + + + P + L L+E++ +A R
Sbjct: 157 DLMLSSWYRRPQT-----IRLLLREFVKYTLARLR 186
>gi|330814246|ref|YP_004358485.1| protein of unknown function DUF218 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487341|gb|AEA81746.1| protein of unknown function DUF218 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 247
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 82/212 (38%), Gaps = 32/212 (15%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + ++ L+ Y+ L + I + S RI
Sbjct: 57 FPLGKNLIHHGLEKDYKNSKLPN----HIDYIFVPSG------------------SRERI 94
Query: 98 FETMRLYKSC--KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
+ + + + K+ + + + D + ES + S +E+ DI +
Sbjct: 95 VQAINIKNNYLPKKVQILYSSGNTSLDTKNKENPESEFVQTIISNSNIEKKDIIFLPSAR 154
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS-DYLNAYYSII 214
+T +N + + N + K ++LV+SA+H+KRS + + + I + S Y+++ YS +
Sbjct: 155 NTIENFKQLKFFLTNKKNKKVLLVTSAFHMKRSLMIAKKYDIKIQGFPSFFYISSDYSSL 214
Query: 215 PLSA-------NFYLTELALKEYIGILIAYYR 239
S N Y ++ +E +GI +
Sbjct: 215 INSYQNLRIQNNLYYFDIFFRELVGIFLVKIM 246
>gi|116329953|ref|YP_799671.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116123642|gb|ABJ74913.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 230
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 48/148 (32%), Gaps = 8/148 (5%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + EPS R+ + LY K + + GD E +L
Sbjct: 59 PGASVYKNEPSAILKDRLDCALELYHQGKVKKILLS-----GDNGSIYYNEVKPMLLYIL 113
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
++ V DI ++ T + + + K++I VS + R+ G+
Sbjct: 114 KNEVNEKDIFVDHAGFRTLDTLIRAKEIFQ---IKDLIFVSQKVYQPRAAFLANKIGLRF 170
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELAL 227
+A SD F+ LA
Sbjct: 171 QAFESDRKIYTSGPFSRFREFFARTLAW 198
>gi|255323748|ref|ZP_05364876.1| putative secreted protein [Corynebacterium tuberculostearicum
SK141]
gi|255299238|gb|EET78527.1| putative secreted protein [Corynebacterium tuberculostearicum
SK141]
Length = 195
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 42/160 (26%), Gaps = 15/160 (9%)
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS R+ L + +I GG E+ V L E
Sbjct: 8 GTAQYDGRPSRILAGRLRHAGELATA-----EGLEVITVGGKLPGDRFTEAGVGRTYLRE 62
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+ + +DT + + +++ H R+ L + GI
Sbjct: 63 H-FPHLTVHAVEEGMDTRSSLSAVKE---AFALSDATIITDPLHRLRTALIARQEGITAT 118
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
S + Y A P E G+ A G
Sbjct: 119 VSGTPYYPAARFSKPWWRYLA------HETGGVAYALVAG 152
>gi|218676855|ref|YP_002395674.1| hypothetical protein VS_II1096 [Vibrio splendidus LGP32]
gi|218325123|emb|CAV26988.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 365
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 64/175 (36%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV LG ++ I R+ T+ + K+ I+ G
Sbjct: 191 EHGAIVALGYALNPDGSMHEI-------LIERLETTLAMSKANPDAM-----IVLTGGVP 238
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
K+ E + + L+ GV +D I E + T NA FSS + K+ ++SSA H
Sbjct: 239 KNHKTEGKLMADWLISKGVSKDRIIEENYATSTVGNALFSSYALARHDIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL + E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQGITFDTVSYPDKPLEDLKKASSG---ELLGIYRDALR 350
>gi|116329443|ref|YP_799163.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116122187|gb|ABJ80230.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 230
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 48/148 (32%), Gaps = 8/148 (5%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + EPS R+ + LY K + + GD E +L
Sbjct: 59 PGASVYKNEPSAILKDRLDCALELYHQGKVKKILLS-----GDNGSIYYNEVKPMLLYIL 113
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
++ V DI ++ T + + + K++I VS + R+ G+
Sbjct: 114 KNEVNEKDIFVDHAGFRTLDTLIRAKEIFQ---IKDLIFVSQKVYQPRAAFLANKIGLRF 170
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELAL 227
+A SD F+ LA
Sbjct: 171 QAFESDRKIYTSGPFSRFREFFARTLAW 198
>gi|302379893|ref|ZP_07268373.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
gi|302312282|gb|EFK94283.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
Length = 308
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ Y ++ ++ KIF + +++ + ++ + LL +L YQ+ KD + I
Sbjct: 89 ILYIAMIIVNLFKIFDLYKYIIGMNLYLSLMVLSHLLGNLIIKYQK------SDKDFDYI 142
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG IE S R+ + Y + K +I+I G +
Sbjct: 143 VVLGGSMKG--------IELSELIKQRMLTSFAYYTTNK------SIMIFSGGKSNGDIE 188
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKNIILVSSAYHL 185
ES+ N +E+ ++ DI LE +++T QN ++ +I+ K I ++++ +H
Sbjct: 189 ESVAMKNFAIENHIQDTDILLEKLAMNTMQNIEYVKKLIQQQDTDFEDKKICVITNNFHA 248
Query: 186 KRSQLYFQHF--GINTKASCSDYLNAYYSII 214
R++L + + S++ + + +
Sbjct: 249 FRTKLICNKMKVNWSVIPTQSNFNSKISTYL 279
>gi|238919197|ref|YP_002932712.1| hypothetical protein NT01EI_1280 [Edwardsiella ictaluri 93-146]
gi|238868766|gb|ACR68477.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 244
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 17/186 (9%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+++ + + + S + + + + Q + V+LG +
Sbjct: 2 WWKRLIYGLIGVGILSGLAALALDRWIS---WVTAPYIYEDVQDLPRREVGVVLGTAKYV 58
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P + RI + Y S K + + GD E + L
Sbjct: 59 APGVINQYYRY------RIQGALNAYNSNKVSYLLLS-----GDNALQSYNEPVTMRRDL 107
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ +GV DI L+ T + + + +++ +H +R+ H GI
Sbjct: 108 IAAGVPNGDIVLDYAGFRTLDSVVRTRRVFDTDDFT---IITQRFHCERALFIAMHLGIQ 164
Query: 199 TKASCS 204
+
Sbjct: 165 AQCLAV 170
>gi|259908016|ref|YP_002648372.1| hypothetical protein EpC_13560 [Erwinia pyrifoliae Ep1/96]
gi|224963638|emb|CAX55135.1| Vancomycin resistance protein [Erwinia pyrifoliae Ep1/96]
gi|283477911|emb|CAY73827.1| Protein sanA [Erwinia pyrifoliae DSM 12163]
Length = 237
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 61/210 (29%), Gaps = 27/210 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ +++ + I + + + V+LG
Sbjct: 5 LIYGLIIIITLISATALGLDRWVS-WKTAPYVYDDLTALPHRQVGVVLGTAKFYRTGG-- 61
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ R+ + Y S K + + + GD E + L+ +GV+
Sbjct: 62 ----INQYYLYRMQGALNAYNSGKVNYLLLS-----GDNALQSYNEPMTMRRDLIAAGVD 112
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DI L+ T + + + I+++ +H +R+ L H GI +
Sbjct: 113 PSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALLIALHMGIQAQCYAV 169
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGIL 234
P N L+E L
Sbjct: 170 ----------PSPKNMMSVR--LREVAARL 187
>gi|254451471|ref|ZP_05064908.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198265877|gb|EDY90147.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 201
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 73/197 (37%), Gaps = 17/197 (8%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
L L +++ P + + + IV +G + + + +R+ ++L++
Sbjct: 3 LSMLAWTFLWPEPDVRALQSADAIVCMGGSMSAD-------GTLAASTLTRVERCVQLFE 55
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+ II SGG + G + + GV +D + E + T QNA FS
Sbjct: 56 AGLAPV----IIFSGGIARPTGPSAGAQMGRFAMTLGVPQDGVIAEGLAQSTLQNALFSL 111
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS---IIPLSANFYL 222
+I N + II+V+ A+HL RS F+ + S
Sbjct: 112 PLIPNA--ERIIIVTEAFHLPRSWASFRWAQWE-LGHPATSFTLVMSEDVRRNPLTGDVR 168
Query: 223 TELALKEYIGILIAYYR 239
+ ++E + I R
Sbjct: 169 WNMLVRESLAIWFNAVR 185
>gi|86359387|ref|YP_471279.1| hypothetical protein RHE_CH03804 [Rhizobium etli CFN 42]
gi|86283489|gb|ABC92552.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 191
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 65/194 (33%), Gaps = 38/194 (19%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
L P + + IV+L G Y RI + + L + +
Sbjct: 11 SVTTLKPPVEPKADAIVVLTGG------------------YQRIDQAVELLQKGAGKRLL 52
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+ + + + + L V+ ++DT NA+ +S+ I
Sbjct: 53 ISGVHPT--TTPAQIRKMTQGSADLFSCCVDI-----GHDAIDTIGNAEETSNWIHAKGY 105
Query: 174 KNIILVSSAYHLKR--SQLYFQHFGINTKASCS---DYLNAYYSIIPLSANFYLTELALK 228
+++++V++ YH+ R ++L + I D + P + + L
Sbjct: 106 RSVLVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNA-----MRVMLA 160
Query: 229 EYIGILIAYYRGNR 242
EY +L G R
Sbjct: 161 EYAKVL---LTGAR 171
>gi|207723593|ref|YP_002253992.1| hypothetical protein RSMK00882 [Ralstonia solanacearum MolK2]
gi|206588795|emb|CAQ35758.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 190
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 30/179 (16%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++IV+LG +S R+ LY + + +
Sbjct: 41 SMPGHADVIVVLGG-----------------ESGQRVIGAAELYHAGVAPRVFVS----- 78
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++ +L+ +GV + I E +S +T +NA+ + M+ ++ +LV+
Sbjct: 79 ------GEGDCLLIVRRLVMAGVPAERIGHECESGNTMENARMTRRMLDGQSVRSAVLVT 132
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S YH R+ F+ A + + + S Y + L EY+ R
Sbjct: 133 SWYHTGRALRAFRRV-WPEVAWGARGVFPG-DTLAKSFPIYESGSILAEYLKRAWYAVR 189
>gi|89072860|ref|ZP_01159417.1| hypothetical protein SKA34_05135 [Photobacterium sp. SKA34]
gi|89051382|gb|EAR56837.1| hypothetical protein SKA34_05135 [Photobacterium sp. SKA34]
Length = 365
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 15/191 (7%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
++ + + + D I+ LG R+ T+ + K+
Sbjct: 175 IEATPLKEKAAKGKLDDKGAIITLGYALNPD-------GSMHPILVERLETTLAMAKANP 227
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+I+ G + E + + L+E G+ ++ I E + T NA FSS +
Sbjct: 228 DA-----LIVLTGGVPMNHKTEGKLMADWLIEKGINKNRIIEENYATSTVDNALFSSYAL 282
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
K+ ++SSA H++R Q F+ T + Y PL +
Sbjct: 283 ARHHIKHATIISSASHVRRGQTLFEIASWQTGPQNITFDTVSYPDKPLKELTTPNDD--- 339
Query: 229 EYIGILIAYYR 239
E +GI R
Sbjct: 340 ELLGIYRDALR 350
>gi|254718046|ref|ZP_05179857.1| hypothetical protein Bru83_00605 [Brucella sp. 83/13]
Length = 212
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 71/228 (31%), Gaps = 40/228 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 3 RILRRLQPVSIILFLAVIAFLGGFFVFSEKVTG---------MQPPVLSEPAEAIVVLTG 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ + L K + + + + + L +
Sbjct: 54 G------------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRATHA 93
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-- 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 94 DKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSS 148
Query: 193 QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + S + + EY+ L A R
Sbjct: 149 RMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVR 193
>gi|218680941|ref|ZP_03528838.1| hypothetical protein RetlC8_19678 [Rhizobium etli CIAT 894]
Length = 216
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 72/216 (33%), Gaps = 38/216 (17%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
F + + L+F+ L P + + IV+L G
Sbjct: 14 WGGFACVLTMALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGG---------------- 57
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
Y RI + + L + + + + + + L V+
Sbjct: 58 --YQRIDQAVELLQKGAGKRLLISGVHPT--TTPRQIRRMTQGSADLFSCCVDI-----G 108
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR--SQLYFQHFGINTKASCS---DY 206
++DT NA+ +S+ I +++I+V++ YH+ R ++L + I D
Sbjct: 109 HDAIDTIGNAEEASNWIHANGYRSVIVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDL 168
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ P + + L EY+ +L G R
Sbjct: 169 KTRNWFTDPNA-----MRVMLAEYVKVL---LAGAR 196
>gi|310778884|ref|YP_003967217.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
gi|309748207|gb|ADO82869.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
Length = 215
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 66/223 (29%), Gaps = 34/223 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + ++ IF++ ++F I I ++ + + G ++G G
Sbjct: 1 MKKLLKGIFYIFLIPVMFLCISNLSIKFFSKNYVYENVEEIPKRKVGLVLGTSKYIIGGG 60
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ R+ K + + GD + E +
Sbjct: 61 I-------------NHFYKYRMEAAYNALMKGKVEYLILS-----GDNSQKEYNEPVRMR 102
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
LL+ G+ + + L+ T + + + ++S + +R+ +
Sbjct: 103 KTLLKMGIPSEKLILDYAGFRTLDSVIRAHKVFGQKSYL---VISQKFQNERAVYIGRKR 159
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G++ A + + L+E+ A+
Sbjct: 160 GVDVIALNAKDPKKK-------------SVYLREFFAKAKAFL 189
>gi|293396978|ref|ZP_06641252.1| membrane protein SanA [Serratia odorifera DSM 4582]
gi|291420449|gb|EFE93704.1| membrane protein SanA [Serratia odorifera DSM 4582]
Length = 248
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 59/215 (27%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ + + + + + Q + + V+LG
Sbjct: 2 WKRLIISLFVITAVLMLSAIALDRWIS---WKTAPYIYDELQQLPNRQVGVVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + GD E + L+
Sbjct: 59 TGVINQYYRY------RIQGAINAYNSGKVKYLLLS-----GDNALQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+G+ DI L+ T + + + +++ +H +R+ H GI
Sbjct: 108 AAGIAPSDIVLDYAGFRTLDSIVRTRKVFDANDFT---IITQRFHCERALFIALHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + ++E L
Sbjct: 165 QCFAVPSPK------------DMLTVRVREIFARL 187
>gi|310768073|gb|ADP13023.1| hypothetical protein EJP617_33420 [Erwinia sp. Ejp617]
Length = 237
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 61/210 (29%), Gaps = 27/210 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ +++ + I + + + V+LG
Sbjct: 5 LIYGLIIIITLISATALGLDRWVS-WKTAPYVYDDLTALPHRQVGVVLGTAKFYRTGG-- 61
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ R+ + Y S K + + + GD E + L+ +GV+
Sbjct: 62 ----INQYYLYRMQGALNAYNSGKVNYLLLS-----GDNALQSYNEPMTMRRDLIAAGVD 112
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DI L+ T + + + I+++ +H +R+ L H GI +
Sbjct: 113 PSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALLIALHMGIQAQCYAV 169
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGIL 234
P N L+E L
Sbjct: 170 ----------PSPKNMMSVR--LREVAARL 187
>gi|238753400|ref|ZP_04614763.1| hypothetical protein yruck0001_19260 [Yersinia ruckeri ATCC 29473]
gi|238708353|gb|EEQ00708.1| hypothetical protein yruck0001_19260 [Yersinia ruckeri ATCC 29473]
Length = 244
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 60/215 (27%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ + + + + + Q + V+LG
Sbjct: 2 WKRLIISLFTIAGLLMVSAIALDRWIS---WKTAPYIYDEIQQLPHRQVGVVLGTA---- 54
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + + GD E + L+
Sbjct: 55 --KYYRTGVINQFYLYRIQGAINAYNSGKVNYLLLS-----GDNALQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 AAGVAPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ P N ++E L
Sbjct: 165 QCFAV----------PSPKNMLSVR--VREIFARL 187
>gi|292488756|ref|YP_003531643.1| protein SanA [Erwinia amylovora CFBP1430]
gi|292899909|ref|YP_003539278.1| exported protein [Erwinia amylovora ATCC 49946]
gi|291199757|emb|CBJ46878.1| putative exported protein [Erwinia amylovora ATCC 49946]
gi|291554190|emb|CBA21424.1| Protein sanA [Erwinia amylovora CFBP1430]
Length = 237
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 20/160 (12%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + R+ + Y S K + + + GD + E +
Sbjct: 48 GVVLGTAKFYRTGVINQYYLYRMQGALNAYNSGKVNYLLLS-----GDNARQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV+ DI L+ T + + + I+++ +H +R+ L H
Sbjct: 103 RRDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALLIALH 159
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
GI + P N L+E L
Sbjct: 160 MGIQAQCYAV----------PSPKNMMSVR--LREVAARL 187
>gi|156935632|ref|YP_001439548.1| hypothetical protein ESA_03497 [Cronobacter sakazakii ATCC BAA-894]
gi|156533886|gb|ABU78712.1| hypothetical protein ESA_03497 [Cronobacter sakazakii ATCC BAA-894]
Length = 215
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 20/150 (13%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E L GV I
Sbjct: 51 NRFFNRRIEAAAGLYHAGKVSW-----LLVSGDNSRADYDEPTAMAEALNRHGVPAAAIF 105
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ T + + + + + ++S A+H +R+ QH+GI+ ++
Sbjct: 106 CDYAGFSTLDSVVRAREVFQENRIT---IISQAFHNQRAIYLAQHYGIDAIGFNAEDP-- 160
Query: 210 YYSIIPLSANFYLTEL-ALKEYIGILIAYY 238
T+ L+E + A
Sbjct: 161 ---------ALRHTQYTLLRERFARVRALL 181
>gi|229051580|ref|ZP_04195052.1| hypothetical protein bcere0027_54850 [Bacillus cereus AH676]
gi|296503712|ref|YP_003665412.1| hypothetical protein BMB171_C2882 [Bacillus thuringiensis BMB171]
gi|228721770|gb|EEL73242.1| hypothetical protein bcere0027_54850 [Bacillus cereus AH676]
gi|296324764|gb|ADH07692.1| hypothetical protein BMB171_C2882 [Bacillus thuringiensis BMB171]
Length = 121
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV--SSAYHLKRSQLY 191
+ + + ++ E +S T+QN FS ++++++G + ++ +H+ R+ LY
Sbjct: 1 MQEYAVNNRIPLENTIKEDRSTTTYQNMLFSKRIMESLKGTQYNCIFSTNNFHVFRAGLY 60
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ G+N++ S +A +Y ++EYI I +
Sbjct: 61 AKIVGLNSQGIGS-----------KTAFYYWPNAMIREYIAIFV 93
>gi|227504565|ref|ZP_03934614.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
gi|227198885|gb|EEI78933.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
Length = 212
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 24/195 (12%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
LL+ +P LS + + I++LG PS +R+ E + +
Sbjct: 3 LLRRAAQRGAKPALSLE--ANIEAIIVLGAA--------QYDGRPSRILSARLEEAVDAH 52
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
Q I+ GG E+ V + L E V + DT ++ +
Sbjct: 53 AVYPQ----IPIVTVGGKLPGDRFTEAEVGQSYLSE-RVPDACVLAVPVGNDTVESLREV 107
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
N I+++ H R L + G++ + A P A
Sbjct: 108 RQ---RYGYANAIVITDPLHRLRVWLIARDEGMS-----TQVRGASRYPTPTFAR-AWWR 158
Query: 225 LALKEYIGILIAYYR 239
E G+ + R
Sbjct: 159 YLAHEMGGLAVFAAR 173
>gi|327406004|ref|YP_004346842.1| hypothetical protein Fluta_4042 [Fluviicola taffensis DSM 16823]
gi|327321512|gb|AEA46004.1| protein of unknown function DUF218 [Fluviicola taffensis DSM 16823]
Length = 217
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 16/189 (8%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
++ KI + + LF + W +++ + + + ++LG
Sbjct: 3 RKRNWSKIIKRTLLISLFFLLFWFFGANWVIES--NAEGKLFNQASQCPKAKVALVLGTS 60
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T + RI + LY++ K I+ GD E
Sbjct: 61 RTNKHGNDNLYFSY------RIKAAVELYRAGK-----VKYILVSGDNSITTYDEPTDMK 109
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N L+++G+ + I L+ T + + + + + I++S +H +R+ +HF
Sbjct: 110 NALVKAGIPANRIFLDYAGFRTLDSMERALKVFGQKEV---IVISQQFHNERAIYLGEHF 166
Query: 196 GINTKASCS 204
G+ +
Sbjct: 167 GMTVYGYNA 175
>gi|256059967|ref|ZP_05450151.1| hypothetical protein Bneo5_06389 [Brucella neotomae 5K33]
Length = 212
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 40/230 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + + G+ + + + P + IV+L
Sbjct: 3 RILRRLQPVSIILFLAFIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTG 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ + L K + + + + + L +
Sbjct: 54 G------------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRATHA 93
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-- 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 94 DKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSS 148
Query: 193 QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + S + + EY+ L A R
Sbjct: 149 RMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVRLG 195
>gi|170726169|ref|YP_001760195.1| hypothetical protein Swoo_1816 [Shewanella woodyi ATCC 51908]
gi|169811516|gb|ACA86100.1| protein of unknown function DUF218 [Shewanella woodyi ATCC 51908]
Length = 166
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG S + SR + + CT +
Sbjct: 4 AIVVLGA-------PNDSDGNLSVMALSRCDLAYTYFSQKNHLKIICTGGVGA-HFNTTS 55
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ N L+ GV + + +S TF++A + +I+ + ++++V+S +HL R
Sbjct: 56 TPHAQYLKNYLMSKGVPQINFLPLVESRFTFEDALLAREVIEEHKITSLVIVTSEFHLPR 115
Query: 188 SQLYF 192
++L F
Sbjct: 116 AKLVF 120
>gi|207742563|ref|YP_002258955.1| hypothetical protein RSIPO_00752 [Ralstonia solanacearum IPO1609]
gi|206593956|emb|CAQ60883.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 190
Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 30/179 (16%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++IV+LG +S R+ LY + + +
Sbjct: 41 SMPGHADVIVVLGG-----------------ESGQRVIGAAELYHAGVAPRVFVS----- 78
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++ +L+ +GV + I E +S +T +NA+ + M+ ++ +LV+
Sbjct: 79 ------GEGDCLLIVRRLVMAGVPAERIGHECESGNTMENARMTRRMLDGQSVRSAVLVT 132
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S YH R+ F+ A + + + S Y + L EY+ R
Sbjct: 133 SWYHTGRALRAFRRV-WPEVAWGARGVFPG-DTLAKSFPIYESGSILAEYLKRAWYVVR 189
>gi|304394191|ref|ZP_07376114.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303293631|gb|EFL88008.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 241
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 76/219 (34%), Gaps = 29/219 (13%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
S L+ FIG G++ LK L + +V+L G+
Sbjct: 32 FRLFSRLFLVLLFIGVGLLVGGFLKFSDGVTSTEQLEAARVPAADAVVVLTGGS------ 85
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+RI E + L + K + + + + L +
Sbjct: 86 ------------ARIAEGLDLIAAGKGKRLLISGVNEDTSVAALKAINTNHAP--LFDCC 131
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTK 200
V+ + +LDT NA+ ++ + + ++I+V+S+YH+ RS L F+ +N K
Sbjct: 132 VDVER-----AALDTIGNARETAKWVADKGYSSLIVVTSSYHMPRSLLEFRRTMPKLNIK 186
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + N + EY+ + A R
Sbjct: 187 PHAV--ILEPLAREGWWKNPETLRFLVVEYVKYVGAAMR 223
>gi|260914328|ref|ZP_05920797.1| membrane protein SanA [Pasteurella dagmatis ATCC 43325]
gi|260631429|gb|EEX49611.1| membrane protein SanA [Pasteurella dagmatis ATCC 43325]
Length = 229
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 75/227 (33%), Gaps = 29/227 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+I L S+++ F LL S I +I + +++
Sbjct: 1 MIALSSILKHSSLKRAFRYLIAALLCSIISLVVIDQAIGFYVRNQ---IYTDINKLPYRP 57
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
V+LG + + + ++R+ T L+ + K + + GD +
Sbjct: 58 YGVVLGT------SKYFGQNSINLFYHNRLLSTYELFSAGKVDYLLLS-----GDNRTLQ 106
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E L + G+ + + ++ T + + + K +++ +H +R
Sbjct: 107 YNEPRTMFQDLKKMGISTEFMYMDFAGFRTLDSVIRADRVFKAHSFT---IITQKFHCER 163
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ ++ I+ ++Y Y+ + +E+ L
Sbjct: 164 ALFIAKYHNIDAICFVANYPQGYHFVR------------FREFFARL 198
>gi|148559698|ref|YP_001259812.1| hypothetical protein BOV_1921 [Brucella ovis ATCC 25840]
gi|189025061|ref|YP_001935829.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237816354|ref|ZP_04595347.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260546109|ref|ZP_05821849.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260562906|ref|ZP_05833392.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567524|ref|ZP_05837994.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|265999274|ref|ZP_06111628.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297247229|ref|ZP_06930947.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
gi|148370955|gb|ABQ60934.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|189020633|gb|ACD73355.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237788421|gb|EEP62636.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260096216|gb|EEW80092.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260152922|gb|EEW88014.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260157042|gb|EEW92122.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|263092990|gb|EEZ17140.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297174398|gb|EFH33745.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
Length = 300
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 40/230 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 91 RILRRLQPVSIILFLAVIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTG 141
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ + L K + + + + + L +
Sbjct: 142 G------------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRATHA 181
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-- 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 182 DKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSS 236
Query: 193 QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + S + + EY+ L A R
Sbjct: 237 RMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVRLG 283
>gi|28198681|ref|NP_778995.1| hypothetical protein PD0776 [Xylella fastidiosa Temecula1]
gi|28056772|gb|AAO28644.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|307579820|gb|ADN63789.1| hypothetical protein XFLM_09510 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 202
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 65/211 (30%), Gaps = 25/211 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + I + + + G I + ++I++LG
Sbjct: 9 RWWQWICVLVVLVFFWLVAVAGWI-------------VWIGQRDQAASSDVIIVLGAAAY 55
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS RI + LY+ ++ T G + AES V
Sbjct: 56 DAK--------PSPVFEERIRHGLYLYQHGYAPTLIFTGGFGGSSAR---FAESQVARRY 104
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L V I +ET S T QN + +++ + I+VS H+ R+ + I
Sbjct: 105 ALRYDVPSRAILIETVSRTTRQNLIQARQLMRVYGLRRAIVVSDPLHMARALRLCRELDI 164
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+ AS + + S+
Sbjct: 165 DALASATP-STRFRSLHTRWRFLLQEVYFFH 194
>gi|297518574|ref|ZP_06936960.1| hypothetical protein EcolOP_13108 [Escherichia coli OP50]
Length = 210
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD E +
Sbjct: 19 GVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLS-----GDNALQSYNEPMTM 73
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV+ DI L+ T + + + I+++ +H +R+ H
Sbjct: 74 RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALH 130
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + S + +E
Sbjct: 131 MGIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKRE 170
>gi|226229327|ref|YP_002763433.1| hypothetical protein GAU_3921 [Gemmatimonas aurantiaca T-27]
gi|226092518|dbj|BAH40963.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 231
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 86/255 (33%), Gaps = 55/255 (21%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ML+ +F+ W + ++ + + IV+LG
Sbjct: 1 MARARRFSYRQLIASMLVGAFMAWLVCLGAIVYW---------SRGSDEGTADAIVVLGA 51
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS +R+ + L+++ + ++++GG ++E+
Sbjct: 52 A--------QYGGRPSPVLKARLDHALGLWRTERAPW----VVLTGGRRPGDLISEAAAG 99
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--------------------K 174
L GV ++LE + + Q +S+++ ++
Sbjct: 100 RRYLARRGVPNQIVRLEQTGRTSLASMQGASALLHALRDSLDAVARSGAKSSRSPLAARP 159
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI- 233
++LVS +H+ R L + G+ S + P+SAN + E ++E I +
Sbjct: 160 RVLLVSDPFHMLRLDLLARLHGLQPMTSPT-------RTSPISANRAVLEYMVRESIALP 212
Query: 234 ------LIAYYRGNR 242
G +
Sbjct: 213 TDVALMFWLKATGGQ 227
>gi|295398606|ref|ZP_06808637.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
gi|294973146|gb|EFG48942.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
Length = 345
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 51/268 (19%)
Query: 2 LLSWIFLI------VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS--- 52
L + IF I + + + ++ + +L + + + L
Sbjct: 71 LFTMIFGIGMISYALKVYRIEKSKLQLTVGLLLAAVLIGGTVFQYVASFFYSTLFHQEVV 130
Query: 53 -------------------YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
L + + + +V+LG + EPS
Sbjct: 131 RVFQFAMAYFVLAFVNYLVVTLRLTLLEDESQQDFVVILG-------ERLSKNGEPSGVL 183
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYNNKLLESGVERDDIKLE 151
SR+ + + + II G ++E+ + + L++ GV + I LE
Sbjct: 184 ESRLDMAVDYIERQQFQFQSVPRIIVSGTSTGAESQVSEARIMADYLVDHGVPPEMILLE 243
Query: 152 TQSLDTFQNAQFSSSMI----KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
Q+ +T +N ++ ++ K ++ + V+S+YHL RSQLY G+ + S
Sbjct: 244 DQAHNTHENFIYAKGIMQANVKQLKTTKAVFVTSSYHLYRSQLYANMEGL-YQMSGVGAQ 302
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILI 235
I ++E++ I+
Sbjct: 303 ATMMERILNW---------VREFVAIIF 321
>gi|300690675|ref|YP_003751670.1| hypothetical protein RPSI07_1014 [Ralstonia solanacearum PSI07]
gi|299077735|emb|CBJ50373.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum PSI07]
Length = 190
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 13/163 (7%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
IP + + +S R+ LY + + + G + ++
Sbjct: 40 ESIPGHADVIVVLGGESGQRVIGAAELYHAGVAPRVFVS-----------GEGDCLLIVR 88
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+L+ +GV D I E +S T NA+ + + ++ +LV+S YH R+ F+
Sbjct: 89 RLVMAGVPADRIGHECESGSTMGNAEMTHRALTGQPVRSAVLVTSWYHTGRALEVFRQV- 147
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + S Y + L EYI R
Sbjct: 148 WPEVTWGARGVFPG-DTLAKSFPIYESGSILAEYIKRAWYAVR 189
>gi|119356675|ref|YP_911319.1| hypothetical protein Cpha266_0844 [Chlorobium phaeobacteroides DSM
266]
gi|119354024|gb|ABL64895.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides DSM
266]
Length = 219
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/231 (15%), Positives = 76/231 (32%), Gaps = 29/231 (12%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ K F + + + I I L +L Y + K ++I+
Sbjct: 14 ILRKTPKKRTMKALFKLISLFVLTACTSAGIFFISLGYLVSLYA------EKPKPADVII 67
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + R+ + LY + T I D + + +
Sbjct: 68 VLGG-----------------DNGLRVKKGAELYNDGYAPRVILTGI----DARFYRPSH 106
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
++ GV + I+++T+S +++ A SS +++ K I+VS HL R
Sbjct: 107 PDWRERRMRALGVPKKSIRIDTRSASSWEEALNSSRLMEKKGWKTAIVVSDPPHLFRLHR 166
Query: 191 YFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ G + +++ + N + E+ L
Sbjct: 167 TWKKAFSGSAKQFILVPTKPQWWNPLLWWKNKKSYSFVISEFQKSLYYSVM 217
>gi|311741378|ref|ZP_07715202.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303548|gb|EFQ79627.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 195
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 42/160 (26%), Gaps = 15/160 (9%)
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS R+ L + +I GG E+ V L E
Sbjct: 8 GTAQYDGRPSRILAGRLRHAGELATA-----KGLEVITVGGKLPGDRFTEAGVGRTYLRE 62
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+ + +DT + + +++ H R+ L + GI
Sbjct: 63 H-FPHLTVHAVEEGMDTRSSLSAVKE---AFALSDATIITDPLHRLRTALIARQEGIAAT 118
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
S + Y A P E G+ A G
Sbjct: 119 VSGTPYYPAARFSKPWWRYLA------HETGGVAYALVAG 152
>gi|306845690|ref|ZP_07478259.1| Bme2 protein [Brucella sp. BO1]
gi|306274011|gb|EFM55838.1| Bme2 protein [Brucella sp. BO1]
Length = 205
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 20/169 (11%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I P R + +L+K + + GD +
Sbjct: 26 LQDDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA---TGDGDCLLN--------K 74
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ GV I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 75 HIMIAKGVPPSAILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 134
Query: 196 ----GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + S P + E +KEY + G
Sbjct: 135 CPQMHFASSPVADADMPGGLSGTPP-----VIEHVVKEYAKLGWYLISG 178
>gi|327193562|gb|EGE60452.1| hypothetical protein RHECNPAF_150012 [Rhizobium etli CNPAF512]
Length = 238
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 68/226 (30%), Gaps = 48/226 (21%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
F + F G+ L P + + IV+L G
Sbjct: 36 WGGFGCVLAIALLFGGFLRFAD----------SVTTLKPPVEPKADAIVVLTGG------ 79
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
Y RI + + L + + + G A+
Sbjct: 80 ------------YQRIDQAVELLQKGAGKRLLIS-----GVHPTTTPAQIRKMTQGSANL 122
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR--SQLYFQHFGINT 199
DI +LDT NA+ +S+ I +++++V++ YH+ R ++L + I
Sbjct: 123 FSCCVDIGH--DALDTIGNAEETSNWIHAKGYRSVLVVTNNYHMPRSLAELSYVDPDIEF 180
Query: 200 KASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
D + P + + L EY +L G R
Sbjct: 181 IPYPVVNSDLKTRNWFTDPNA-----MRVMLAEYAKVL---LAGAR 218
>gi|322433354|ref|YP_004210571.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321165743|gb|ADW71444.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 199
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 72/225 (32%), Gaps = 34/225 (15%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +F + ++ I + +P + + I+++G
Sbjct: 2 RKFWLVFAVVVCIMTGMAISYLTVPK---------------ENGQLESFDAIIVIGC--- 43
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A S +R+ E ++ + + K +I SGG H + ES V
Sbjct: 44 ----PTADDGTLSPMQKARVLEGVKEFSAGKAKH----LIFSGGASNNHSI-ESQVMAQA 94
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
E GV + + L+ ++ +T N FS ++ + ++SS HL R G+
Sbjct: 95 AAEMGVPNEAVFLDQEANNTLGNIFFSHLIMTGKGWNSAEVISSQNHLPR-------LGV 147
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ P +E + + G R
Sbjct: 148 ILALYNFSWQTHAAPWPPNINPLIKFLYYGREVAATTVVRWFGFR 192
>gi|148558293|ref|YP_001257412.1| Bme2 protein [Brucella ovis ATCC 25840]
gi|148369578|gb|ABQ62450.1| Bme2 protein [Brucella ovis ATCC 25840]
Length = 205
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 64/169 (37%), Gaps = 20/169 (11%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I P R + +L+K + + GD +
Sbjct: 26 LQDDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA---TGDGDCLLN--------K 74
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ GV I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 75 HIMMAKGVPPSAILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 134
Query: 196 ----GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + + IP + + +KEY + G
Sbjct: 135 CPQMHFTSSPVADADMPGGFPGIPP-----VIKHVVKEYAKLGWYLISG 178
>gi|261316090|ref|ZP_05955287.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261305116|gb|EEY08613.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 136
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 7/122 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 19 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 78
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 79 LPQH---VDGIIVLGGYMNGEIVAGRQNFELN-SAADRIVETMRLARLYPDAKILVSGGE 134
Query: 119 SG 120
Sbjct: 135 GT 136
>gi|171915393|ref|ZP_02930863.1| predicted thioredoxin-like protein [Verrucomicrobium spinosum DSM
4136]
Length = 263
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 62/203 (30%), Gaps = 21/203 (10%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + R+ + +F G ++ + S + ++L
Sbjct: 31 WRWADEFTRRWLVRLLKLAMFLIPGLVACYALVWALAEKQ---VYDSVNDVPVKYVGLVL 87
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G + E + R+ L ++ K ++ GDP + G E +
Sbjct: 88 GC-------PEKVGTEDNAFFVERVKSAQALLEAGKVQ-----FLLVSGDPDRDGCNEPL 135
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L+ GV D + + T + + + + +VS H +R+
Sbjct: 136 AMKAALVAGGVPADRVYCDFGGGRTLDSVVRARKVFGQRD---MTIVSHGLHNERALYMA 192
Query: 193 QHFGIN---TKASCSDYLNAYYS 212
+ G+ + +D L +
Sbjct: 193 RRRGLPDSVALNTPTDNLAPGWK 215
>gi|261821224|ref|YP_003259330.1| hypothetical protein Pecwa_1943 [Pectobacterium wasabiae WPP163]
gi|261605237|gb|ACX87723.1| protein of unknown function DUF218 [Pectobacterium wasabiae WPP163]
Length = 259
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 55/185 (29%), Gaps = 26/185 (14%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + + R+ T+ Y S K
Sbjct: 29 WKTAPFIYDELQTLPKRQVGVVLGTAKYYRTGMLNQYYQF------RMQGTINAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + GD E + L+ +GV DI L+ T + + +
Sbjct: 83 SYLLLS-----GDNALQSYNEPMTMRRDLIAAGVPPSDIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+++ +H +R+ H GI + P N + ++E
Sbjct: 138 TNDFT---IITQRFHCERALFIALHLGIQAQCYAV----------PSPKNMMIVR--IRE 182
Query: 230 YIGIL 234
+ L
Sbjct: 183 FGARL 187
>gi|161620495|ref|YP_001594381.1| hypothetical protein BCAN_B0429 [Brucella canis ATCC 23365]
gi|163844593|ref|YP_001622248.1| hypothetical protein BSUIS_B0427 [Brucella suis ATCC 23445]
gi|225686235|ref|YP_002734207.1| hypothetical protein BMEA_B0404 [Brucella melitensis ATCC 23457]
gi|254699682|ref|ZP_05161510.1| hypothetical protein Bsuib55_02296 [Brucella suis bv. 5 str. 513]
gi|254702819|ref|ZP_05164647.1| hypothetical protein Bsuib36_02539 [Brucella suis bv. 3 str. 686]
gi|256015209|ref|YP_003105218.1| Bme2 protein [Brucella microti CCM 4915]
gi|256043322|ref|ZP_05446257.1| hypothetical protein Bmelb1R_02479 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256111677|ref|ZP_05452661.1| hypothetical protein Bmelb3E_03418 [Brucella melitensis bv. 3 str.
Ether]
gi|256262633|ref|ZP_05465165.1| Bme2 [Brucella melitensis bv. 2 str. 63/9]
gi|260564530|ref|ZP_05835015.1| Bme2 protein [Brucella melitensis bv. 1 str. 16M]
gi|260568269|ref|ZP_05838738.1| Bme2 protein [Brucella suis bv. 4 str. 40]
gi|261750147|ref|ZP_05993856.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261753420|ref|ZP_05997129.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265989745|ref|ZP_06102302.1| Bme2 [Brucella melitensis bv. 1 str. Rev.1]
gi|265993148|ref|ZP_06105705.1| Bme2 [Brucella melitensis bv. 3 str. Ether]
gi|294853761|ref|ZP_06794433.1| hypothetical protein BAZG_02742 [Brucella sp. NVSL 07-0026]
gi|297250207|ref|ZP_06933894.1| hypothetical protein BAYG_03205 [Brucella abortus bv. 5 str. B3196]
gi|5478233|gb|AAD43833.1|AF076290_2 Bme2 [Brucella melitensis]
gi|161337306|gb|ABX63610.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|163675316|gb|ABY39426.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225642340|gb|ACO02253.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|255997869|gb|ACU49556.1| Bme2 protein [Brucella microti CCM 4915]
gi|260152173|gb|EEW87266.1| Bme2 protein [Brucella melitensis bv. 1 str. 16M]
gi|260154934|gb|EEW90015.1| Bme2 protein [Brucella suis bv. 4 str. 40]
gi|261739900|gb|EEY27826.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743173|gb|EEY31099.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764018|gb|EEZ10050.1| Bme2 [Brucella melitensis bv. 3 str. Ether]
gi|263000414|gb|EEZ13104.1| Bme2 [Brucella melitensis bv. 1 str. Rev.1]
gi|263092418|gb|EEZ16671.1| Bme2 [Brucella melitensis bv. 2 str. 63/9]
gi|294819416|gb|EFG36416.1| hypothetical protein BAZG_02742 [Brucella sp. NVSL 07-0026]
gi|297172960|gb|EFH32338.1| hypothetical protein BAYG_03205 [Brucella abortus bv. 5 str. B3196]
gi|326410585|gb|ADZ67649.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326553876|gb|ADZ88515.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 205
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 22/170 (12%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I P R + +L+K + + GD +
Sbjct: 26 LQDDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA---TGDGDCLLN--------K 74
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ GV I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 75 HIMMAKGVPPSAILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 134
Query: 196 ----GINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +D + P+ E +KEY + G
Sbjct: 135 CPQMHFTSSPVADADMPGGFPGTPPV------IEHVVKEYAKLGWYLISG 178
>gi|256059361|ref|ZP_05449563.1| hypothetical protein Bneo5_03263 [Brucella neotomae 5K33]
gi|261323321|ref|ZP_05962518.1| Bme2 [Brucella neotomae 5K33]
gi|261299301|gb|EEY02798.1| Bme2 [Brucella neotomae 5K33]
Length = 205
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 63/170 (37%), Gaps = 22/170 (12%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I P R + +L+K + GD +
Sbjct: 26 LQDDGRPADVIIVPGGDGAPRAAQAAQLWKDGCSPYILA---TGDGDCLLN--------K 74
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ GV I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 75 HIMMAKGVPPSAILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 134
Query: 196 ----GINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +D + P+ E +KEY + G
Sbjct: 135 CPQMHFTSSPVADADMPGGFPGTPPV------IEHVVKEYAKLGWYLISG 178
>gi|190893641|ref|YP_001980183.1| hypothetical protein RHECIAT_CH0004075 [Rhizobium etli CIAT 652]
gi|190698920|gb|ACE93005.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 236
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 68/226 (30%), Gaps = 48/226 (21%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
F + F G+ L P + + IV+L G
Sbjct: 34 WGGFGCVLAIALLFGGFLRFAD----------SVTTLKPPVEPKADAIVVLTGG------ 77
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
Y RI + + L + + + G A+
Sbjct: 78 ------------YQRIDQAVELLQKGVGKRLLIS-----GVHPTTTPAQIRKMTQGSANL 120
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR--SQLYFQHFGINT 199
DI +LDT NA+ +S+ I +++++V++ YH+ R ++L + I
Sbjct: 121 FSCCVDIGH--DALDTIGNAEETSNWIHAKGYRSVLVVTNNYHMPRSLAELSYVDPDIEF 178
Query: 200 KASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
D + P + + L EY +L G R
Sbjct: 179 IPYPVVNSDLKTRNWFTDPNA-----MRVMLAEYAKVL---LAGAR 216
>gi|318604986|emb|CBY26484.1| sana protein [Yersinia enterocolitica subsp. palearctica Y11]
Length = 281
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 60/215 (27%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ + + + + + Q + V+LG
Sbjct: 2 WKRLIISLIIIAGLLMVTAIALDRWIS---WKTAPFIYDELQDLPHRQVGVVLGTAKYYK 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + GD H E + L+
Sbjct: 59 TGGINQFYQY------RIQGALNAYNSGKVSYLLLS-----GDNALHSYNEPMTMRRDLM 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 AAGVPASDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAMHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + ++E L
Sbjct: 165 QCFAVPSPK------------DMLNVRVREIFARL 187
>gi|312172909|emb|CBX81165.1| Protein sanA [Erwinia amylovora ATCC BAA-2158]
Length = 237
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 20/160 (12%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + R+ + Y S K + + + GD + E +
Sbjct: 48 GVVLGTAKFYRTGVINQYYLYRMQGALNAYNSGKVNYLLLS-----GDNARQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV+ DI L+ T + + + I+++ +H +R+ L H
Sbjct: 103 RRDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALLIALH 159
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
GI + P N L+E L
Sbjct: 160 MGIQAQCYAV----------PSPKNMMSVR--LREVAARL 187
>gi|92116288|ref|YP_576017.1| hypothetical protein Nham_0669 [Nitrobacter hamburgensis X14]
gi|91799182|gb|ABE61557.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 238
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 7/165 (4%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G P A I SRI + + L + + + +
Sbjct: 52 GVETKPASNADGIVVLTGGSSRISDAVELLAGGYGKRLLISGVHPTNGVSDISRSLPDNQ 111
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL V+ D +++T NA + + +++I+V+S YH+ R+ + +
Sbjct: 112 R--LLTCCVDLDR-----SAVNTRSNASETRRWVDEQGFRSLIVVTSNYHMPRAIVELSY 164
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + P + L L EY L A R
Sbjct: 165 AMPDITLIPFAVIGDKWREEPWWTSGATLRLLLSEYAKYLAAEVR 209
>gi|326335887|ref|ZP_08202064.1| membrane protein SanA [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691851|gb|EGD33813.1| membrane protein SanA [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 223
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 62/199 (31%), Gaps = 16/199 (8%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + K +L ++ + + + + +LLG
Sbjct: 8 IFNKRFLKRSMFFIVFVLLMIGVVIHNADNTIR--EATKGKLYTQVDSIPKNRVGLLLGT 65
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ + + R+ + L+K+ K I+ GD E +
Sbjct: 66 SQYLKDGRINLYFQY------RVEAAVALFKAGKID-----FILISGDNSTKENDEPTDF 114
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ D I L+ T + + + + ++S A+H +R+ Q
Sbjct: 115 KKALIALGIPADRIYLDYAGFRTLDSVIRAREVFG---LTQMAIISQAFHNERAIYIAQK 171
Query: 195 FGINTKASCSDYLNAYYSI 213
GI + ++ Y +
Sbjct: 172 KGIKAVGFNAKDVDKYIGL 190
>gi|261758934|ref|ZP_06002643.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261738918|gb|EEY26914.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 269
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/230 (13%), Positives = 70/230 (30%), Gaps = 40/230 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 60 RILRRLQPVSIILFLAVIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTG 110
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ + L K + + + + + L +
Sbjct: 111 G------------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRATHA 150
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-- 192
+ L ++ D +L+T N S I+ +I+V++ YH+ RS L
Sbjct: 151 DKSLFACCIDLDR-----TALNTVGNVAESERWIRANDYHRVIVVTNNYHIPRSILEMSS 205
Query: 193 QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + S + + EY+ L A R
Sbjct: 206 RMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVRLG 252
>gi|115526818|ref|YP_783729.1| hypothetical protein RPE_4830 [Rhodopseudomonas palustris BisA53]
gi|115520765|gb|ABJ08749.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 233
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 55/162 (33%), Gaps = 7/162 (4%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + P A I SR+ + + L S + + + +
Sbjct: 44 GAEVRPGRNADGIVVLTGGSSRVSDAIELLSSGYGKRLLISGVHRTNGVHDISRTVPDSH 103
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ ++ D +++T NA + +++I+V+S YH+ R+ + H
Sbjct: 104 RWL--DCCIDLDR-----SAINTRSNAAEARRWAHERGFRSLIVVTSNYHMPRAIVEMSH 156
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + + + P ++ L L EY L A
Sbjct: 157 AMPDVELIPFAVVGDKWRDEPWWSSGTTFRLLLSEYAKYLAA 198
>gi|209883916|ref|YP_002287773.1| hypothetical protein OCAR_4768 [Oligotropha carboxidovorans OM5]
gi|209872112|gb|ACI91908.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 234
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 39/221 (17%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ ++ G+ L + ++ + IV+L G
Sbjct: 22 WPVTRFVVSFVIIFLAGFAWFAGQLHS----------EEIKPERHADGIVVLTGG----- 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
SR+ + + L + + + + + LL
Sbjct: 67 -------------ASRVADALDLLSRGYGKRLLISGVHPANGTAD--ILRAQPERETLLS 111
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GIN 198
V+ D +++T NA + +K +++I+V+S YH+ R+ + H I+
Sbjct: 112 CCVDLDR-----SAVNTRSNATETRRWVKERGFRSLIVVTSNYHMPRASVELSHAMPDID 166
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ + P + L EY+ L A R
Sbjct: 167 LIFYPV--VSEAWRGEPWWHSAAGIRLVALEYVKYLAAQVR 205
>gi|329944928|ref|ZP_08292955.1| hypothetical protein HMPREF9056_00838 [Actinomyces sp. oral taxon
170 str. F0386]
gi|328529739|gb|EGF56635.1| hypothetical protein HMPREF9056_00838 [Actinomyces sp. oral taxon
170 str. F0386]
Length = 355
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 23/217 (10%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ + F + LL L + QR + +++V+ G G P +
Sbjct: 129 ALLLAALMFCACAYLGVFLLILLAQTVVQRIWGGRRTVPHPDVVVVHGAGLINGRVGPLL 188
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVYNNKLLESGVE 144
SRI ++ + +++ G ++E+ + + G+
Sbjct: 189 --------GSRITGGIKAWHDEDALRPGVPLLVMSGGQGPDEPVSEARAMADYAIARGIP 240
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I LE +S T N + ++ ++LV+S++H R+ + G+ +
Sbjct: 241 SGQILLEDRSTTTRTNITCTRDLLAEHGMVDPQVLLVTSSFHAVRTAILASDMGVPWAVA 300
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S +A FY+ L+EYI +L R
Sbjct: 301 PS-----------RTAWFYIVNAWLREYIAVLTYRRR 326
>gi|332978226|gb|EGK14957.1| hypothetical protein HMPREF9373_0568 [Psychrobacter sp. 1501(2011)]
Length = 312
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 19/158 (12%)
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ I + S R+ +T+ ++ K + T + S +
Sbjct: 142 TSAPLHQPDIVLNKYSLIRM-QTVMWHQRQKPLPIILTGVESA------------WMQDW 188
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L G+ ++I E S++T +NA+F++ + +++ L++ AYH+ R++ F GI
Sbjct: 189 LNNHGI--ENIITENASMNTCENARFTAK---RLNLQDVYLITDAYHMTRARRQFALNGI 243
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + L + N + + E
Sbjct: 244 HALPIPAA-LPMKKGWLAPKNNAQHSRRTVYELAAYAR 280
>gi|254708583|ref|ZP_05170411.1| hypothetical protein BpinM_16968 [Brucella pinnipedialis
M163/99/10]
Length = 132
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 7/122 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG E + + RI ETMRL + + +
Sbjct: 75 LPQH---VDGIIVLGGYMNGEIVAGRQNFELN-SAADRIVETMRLARLYPDAKILVSGGE 130
Query: 119 SG 120
Sbjct: 131 GT 132
>gi|154243978|ref|YP_001414936.1| hypothetical protein Xaut_0020 [Xanthobacter autotrophicus Py2]
gi|154158063|gb|ABS65279.1| protein of unknown function DUF218 [Xanthobacter autotrophicus Py2]
Length = 300
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 74/223 (33%), Gaps = 33/223 (14%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R + ++ + + L F+ Q P K + IV+L G
Sbjct: 57 RPRSLLRRLVVSLVLLTGVAGVAVAAGFLAFTAQIAAREPAAVKPADAIVVLTGG----- 111
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
SRI + + L + + T + + L +
Sbjct: 112 -------------PSRIVDAVGLLADGRGRRLLITGV--------NPTTSMDEMRRALPD 150
Query: 141 -SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GI 197
+ I L ++L+T NA ++ + + +++++V+S++H+ R+ + +
Sbjct: 151 GEHLLGCCIDLGHKALNTRGNALEAAEWAREKRFRSLVVVTSSWHMPRAMMELGRALPDV 210
Query: 198 NTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ S +L +KEY+ ++A +
Sbjct: 211 ELVSYPVVTTRTQPESWWSDPGTL---KLLVKEYLKFIMATVK 250
>gi|108797853|ref|YP_638050.1| hypothetical protein Mmcs_0878 [Mycobacterium sp. MCS]
gi|119866947|ref|YP_936899.1| hypothetical protein Mkms_0895 [Mycobacterium sp. KMS]
gi|108768272|gb|ABG06994.1| protein of unknown function DUF218 [Mycobacterium sp. MCS]
gi|119693036|gb|ABL90109.1| protein of unknown function DUF218 [Mycobacterium sp. KMS]
Length = 193
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 12/129 (9%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G R+ + + + Q II G ++G
Sbjct: 44 AIVILGYGLEPN-------GTMRPILRRRVITGLTVAQFFPQSP-----IIVTGGNPRNG 91
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++E+ LL G I +E ++ T QNA+FS + + IILV+S+ H R
Sbjct: 92 VSEAAAMRRMLLVLGFPDHRIIVEDKANSTVQNARFSVPLAEKAGTSGIILVTSSTHQDR 151
Query: 188 SQLYFQHFG 196
+ F G
Sbjct: 152 ADGNFVDAG 160
>gi|17986358|ref|NP_538992.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260755671|ref|ZP_05868019.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758896|ref|ZP_05871244.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760620|ref|ZP_05872963.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884697|ref|ZP_05896311.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214946|ref|ZP_05929227.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261217820|ref|ZP_05932101.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261314966|ref|ZP_05954163.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316476|ref|ZP_05955673.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321332|ref|ZP_05960529.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751141|ref|ZP_05994850.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755703|ref|ZP_05999412.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265987548|ref|ZP_06100105.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265992020|ref|ZP_06104577.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993756|ref|ZP_06106313.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17981947|gb|AAL51256.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260669214|gb|EEX56154.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671052|gb|EEX57873.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675779|gb|EEX62600.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874225|gb|EEX81294.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916553|gb|EEX83414.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260922909|gb|EEX89477.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294022|gb|EEX97518.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295699|gb|EEX99195.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303992|gb|EEY07489.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261740894|gb|EEY28820.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745456|gb|EEY33382.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764737|gb|EEZ10658.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263003086|gb|EEZ15379.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|264659745|gb|EEZ30006.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 250
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 40/230 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 41 RILRRLQPVSIILFLAVIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTG 91
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ + L K + + + + + L +
Sbjct: 92 G------------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRATHA 131
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-- 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 132 DKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSS 186
Query: 193 QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + S + + EY+ L A R
Sbjct: 187 RMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVRLG 233
>gi|126433493|ref|YP_001069184.1| hypothetical protein Mjls_0884 [Mycobacterium sp. JLS]
gi|126233293|gb|ABN96693.1| protein of unknown function DUF218 [Mycobacterium sp. JLS]
Length = 193
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 12/129 (9%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G R+ + + + Q II G ++G
Sbjct: 44 AIVILGYGLEPN-------GTMRPILRRRVITGLTVAQFFPQSP-----IIVTGGNPRNG 91
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++E+ LL G I +E ++ T QNA+FS + + IILV+S+ H R
Sbjct: 92 VSEAAAMRRMLLVLGFPDHRIIVEDRANSTVQNARFSVPLAEKAGTSGIILVTSSTHQDR 151
Query: 188 SQLYFQHFG 196
+ F G
Sbjct: 152 ADGNFVDAG 160
>gi|172038633|ref|YP_001805134.1| hypothetical protein cce_3720 [Cyanothece sp. ATCC 51142]
gi|171700087|gb|ACB53068.1| DUF218-containing protein [Cyanothece sp. ATCC 51142]
Length = 244
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 65/223 (29%), Gaps = 50/223 (22%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L + K F F+LL I + +L++ L + I +
Sbjct: 8 LTGRLNKRKWKKRFKLIFLLLMGLILASLTVNLLVR----------LPINSNHTVDGIFV 57
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG R ++ + II+S G ++
Sbjct: 58 LGGSIR------------------REIYAAQIASEYPE----VPIIVSQG-------SKP 88
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
D + +E + TF N F +++ + +++S HL R++
Sbjct: 89 PCIKLIFQREHARMDQVWIEQCANSTFDNFFFGIPLLQKHGVHKVKVITSQSHLPRAKWL 148
Query: 192 FQHF----GINTK-------ASCSDYLNAYYSIIPLSANFYLT 223
Q GI + ++ + + + ++ +
Sbjct: 149 AQIHLGAKGIAVEIDTPKERGVPGNHESDLKTFLDVTRSLMWA 191
>gi|261492268|ref|ZP_05988831.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494489|ref|ZP_05990975.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309873|gb|EEY11090.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312047|gb|EEY13187.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 227
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 16/179 (8%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
I ++ L ++ + + V+LG + +
Sbjct: 33 LLGIAILLLVDSLTSYIVRD--KIYTDSKQIPYREYAVVLGTAKFYSKDVINQYYKY--- 87
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ +L + K + + + GD + E + LL+ G+ IK +
Sbjct: 88 ---RLEAAKQLVQEGKVNQLLLS-----GDNKTPYYNEPKTMTSDLLKMGIATSKIKQDY 139
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
TF + + + K ++S +H +R+ + I+ + Y Y
Sbjct: 140 AGYTTFDSIIRAKKVYK---LPPFTIISQKFHCERALFIAKFRDIDAICYAATYPEGAY 195
>gi|23500175|ref|NP_699615.1| Bme2 protein [Brucella suis 1330]
gi|23463775|gb|AAN33620.1| Bme2 protein [Brucella suis 1330]
Length = 205
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 22/170 (12%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I P R + +L+K + + GD +
Sbjct: 26 LQDDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA---TGDGDCLLN--------K 74
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ GV I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 75 HIMMAKGVPPSAILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 134
Query: 196 ----GINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +D + P+ E +KEY + G
Sbjct: 135 CPQMHFTSSPVADADMPGGFPGTPPV------IEHVVKEYAKLGWYLISG 178
>gi|322649357|gb|EFY45793.1| hypothetical protein SEEM675_08605 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
Length = 261
Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 53/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + + +
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|262184622|ref|ZP_06044043.1| hypothetical protein CaurA7_11562 [Corynebacterium aurimucosum ATCC
700975]
Length = 194
Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 47/172 (27%), Gaps = 25/172 (14%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS R+ + II GG
Sbjct: 3 YVIVLGAA--------QYDGRPSRILRGRVRYAAEYAAAH-----DLPIITVGGKLPGDR 49
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V L + + ++ + ++ + + ++++ H R
Sbjct: 50 FTEAGVARALLDDDPLHVTALEEGLDTRS------ELAAAREKLGVSEAVIITDPLHRLR 103
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ L + GI + Y + IP E G+ R
Sbjct: 104 TFLIARQEGIRATVLGTPYYPSPRFSIPWWRYLA------HETGGLAYLGLR 149
>gi|299065943|emb|CBJ37124.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum CMR15]
Length = 180
Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 13/163 (7%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+P + + +S R+ LY + M + G + ++
Sbjct: 30 ESVPGRADVIVVLGGESGQRVIGAAELYHAGVAPRMFVS-----------GGGDCLLIVR 78
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+L +GV + I E +S T +NA+ + + ++ +LV+S YH R+ F+
Sbjct: 79 RLEMAGVPAERIGHECESGSTMENARMTRRTLAGQPVRSAVLVTSWYHTGRALNVFRRV- 137
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A + + + Y + L EYI R
Sbjct: 138 WPEVAWGARGVFPGDTFAKSFP-IYESGSILAEYIKRTWYAVR 179
>gi|160940880|ref|ZP_02088220.1| hypothetical protein CLOBOL_05772 [Clostridium bolteae ATCC
BAA-613]
gi|158436124|gb|EDP13891.1| hypothetical protein CLOBOL_05772 [Clostridium bolteae ATCC
BAA-613]
Length = 275
Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 93/285 (32%), Gaps = 65/285 (22%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L F+I+ + + S I+ +L+F G + + + P P
Sbjct: 11 VLCVVYFIIIVVYAGISTSFAFIWLFFAALLVFLVYGK-------WYYARNMERIPRWVP 63
Query: 61 QWKKDG-----------NIIVLLGNGTTIIPTIPAIRI--------EPSFQSYSRIFETM 101
I+V LG T + + + S R+ +
Sbjct: 64 VSVVTTCIAGVAVLGILCILVFLGAATPGKANLDYVIVLGARVKEHTVSNSLKKRLDRAI 123
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+ + +++SGG +E+ V + L+ +GV + +E+ S T +N
Sbjct: 124 VYAEENP----YTILVLSGGKGPGEADSEAQVMYDYLVYNGVSPRQLLMESDSTSTVENI 179
Query: 162 QFSSSMIKNMQGKNII-------------------------LVSSAYHLKRSQLYFQHFG 196
+S +I+ + K+ +++S +H+ R++L + +G
Sbjct: 180 AYSKIVIEQDRMKDKKEIIPMPGKTGSVPYAIAPDKPLEIGVLTSNFHIYRARLTAEKWG 239
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + I L ++E IL GN
Sbjct: 240 FDNV-YGISAESDPVLFI---------HLCVRECASILKDRLMGN 274
>gi|265982992|ref|ZP_06095727.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264661584|gb|EEZ31845.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 250
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 71/228 (31%), Gaps = 40/228 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 41 RILRRLQPVSIILFLAVIAFLGGFFVFSEKVTG---------MQPPVLSEPAEAIVVLTG 91
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ + L K + + + + + L +
Sbjct: 92 G------------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRATHA 131
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-- 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 132 DKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSS 186
Query: 193 QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + S + + EY+ L A R
Sbjct: 187 RMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVR 231
>gi|213586757|ref|ZP_03368583.1| hypothetical protein SentesTyph_37945 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 213
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 3 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRY------RIQGALNAYNSGKV 56
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 57 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 111
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
+ I+++ +H +R+ H GI + + +
Sbjct: 112 ---INDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLY 168
Query: 225 LALKE 229
+ +E
Sbjct: 169 IFKRE 173
>gi|206580837|ref|YP_002237434.1| protein SanA [Klebsiella pneumoniae 342]
gi|288934358|ref|YP_003438417.1| hypothetical protein Kvar_1480 [Klebsiella variicola At-22]
gi|290508563|ref|ZP_06547934.1| hypothetical protein HMPREF0485_00334 [Klebsiella sp. 1_1_55]
gi|206569895|gb|ACI11671.1| protein SanA [Klebsiella pneumoniae 342]
gi|288889087|gb|ADC57405.1| protein of unknown function DUF218 [Klebsiella variicola At-22]
gi|289777957|gb|EFD85954.1| hypothetical protein HMPREF0485_00334 [Klebsiella sp. 1_1_55]
Length = 243
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L++ GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRRDLIKGGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + +S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMWSVRLREFGARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|238757214|ref|ZP_04618401.1| hypothetical protein yaldo0001_11130 [Yersinia aldovae ATCC 35236]
gi|238704592|gb|EEP97122.1| hypothetical protein yaldo0001_11130 [Yersinia aldovae ATCC 35236]
Length = 257
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 60/217 (27%), Gaps = 29/217 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ + + + + + Q + V+LG
Sbjct: 2 WKRLIISLIIIAGLLMVTAIALDRWIS---WKTAPFIYDELQDLPHRQVGVVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + GD E + L+
Sbjct: 59 TGGINQFYQY------RIQGALNAYNSGKVSYLLLS-----GDNALQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 AAGVAPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAMHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ P N ++E L A
Sbjct: 165 QCFAV----------PSPKNMLNVR--VREIFARLSA 189
>gi|329890874|ref|ZP_08269217.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
gi|328846175|gb|EGF95739.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
Length = 218
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 63/216 (29%), Gaps = 37/216 (17%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K + + L G + + R + IV L
Sbjct: 2 KFLTLIAVVALMWLTGLFVFAERV---------RGFTPAPDPARADAIVSLTG------- 45
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
S R+ +RL + K + + + ++ L ++KL
Sbjct: 46 ----------PSAERVNAAIRLLEQGKGDRLLISGVNRE--VRRQELRALTPGSSKLFNC 93
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINT 199
V+ ++ +T NAQ ++ ++ ++I+V+S YH+ RS L + G+
Sbjct: 94 CVDL-----GFEAENTVGNAQEIAAWARSKGYDDLIVVTSDYHMPRSLLEIRGAAPGVRL 148
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
EY+ L
Sbjct: 149 TPYAVS--TPSLDNAGWWRATETARRMTLEYMKYLA 182
>gi|225628192|ref|ZP_03786227.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617017|gb|EEH14064.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 254
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/230 (13%), Positives = 70/230 (30%), Gaps = 40/230 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 45 RILRRLQPVSIILFLAVIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTG 95
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ + L K + + + + + L +
Sbjct: 96 G------------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRATHA 135
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-- 192
+ L ++ D +L+T N S I+ +I+V++ YH+ RS L
Sbjct: 136 DKSLFACCIDLDR-----TALNTVGNVAESERWIRANDYHRVIVVTNNYHIPRSILEMSS 190
Query: 193 QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + S + + EY+ L A R
Sbjct: 191 RMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVRLG 237
>gi|330859345|emb|CBX69691.1| protein sanA [Yersinia enterocolitica W22703]
Length = 265
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 59/213 (27%), Gaps = 27/213 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ +++ + I + Q + V+LG
Sbjct: 2 WKRLIISLIIIAGLLMVTAIALDRWIS-WKTAPFIYDELQDLPHRQVGVVLGTA------ 54
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ RI + Y S K + + GD H E + L+ +
Sbjct: 55 KYYKTGGINQFYQYRIQGALNAYNSGKVSYLLLS-----GDNALHSYNEPMTMRRDLMAA 109
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV DI L+ T + + + I+++ +H +R+ H GI +
Sbjct: 110 GVPASDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAMHMGIQAQC 166
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + ++E L
Sbjct: 167 FAVPSPK------------DMLNVRVREIFARL 187
>gi|123443010|ref|YP_001006985.1| hypothetical protein YE2795 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089971|emb|CAL12828.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 267
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 59/213 (27%), Gaps = 27/213 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ +++ + I + Q + V+LG
Sbjct: 2 WKRLIISLIIIAGLLMVTAIALDRWIS-WKTAPFIYDELQDLPHRQVGVVLGTA------ 54
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ RI + Y S K + + GD H E + L+ +
Sbjct: 55 KYYKTGGINQFYQYRIQGALNAYNSGKVSYLLLS-----GDNALHSYNEPMTMRRDLMAA 109
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV DI L+ T + + + I+++ +H +R+ H GI +
Sbjct: 110 GVPASDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAMHMGIQAQC 166
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + ++E L
Sbjct: 167 FAVPSPK------------DMLNVRVREIFARL 187
>gi|71276641|ref|ZP_00652913.1| Protein of unknown function DUF218 [Xylella fastidiosa Dixon]
gi|71898002|ref|ZP_00680207.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|71900050|ref|ZP_00682194.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|170730100|ref|YP_001775533.1| hypothetical protein Xfasm12_0924 [Xylella fastidiosa M12]
gi|182681372|ref|YP_001829532.1| hypothetical protein XfasM23_0820 [Xylella fastidiosa M23]
gi|71162568|gb|EAO12298.1| Protein of unknown function DUF218 [Xylella fastidiosa Dixon]
gi|71730193|gb|EAO32280.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|71732246|gb|EAO34301.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|167964893|gb|ACA11903.1| conserved hypothetical protein [Xylella fastidiosa M12]
gi|182631482|gb|ACB92258.1| protein of unknown function DUF218 [Xylella fastidiosa M23]
Length = 182
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 12/185 (6%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+ + ++I++LG PS RI + L
Sbjct: 2 FFWLVAVAGWIVWIGQRDQAASSDVIIVLGAAAYDAK--------PSPVFEERIRHGLYL 53
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Y+ ++ T G + AES V L V I +ET S T QN
Sbjct: 54 YQHGYAPTLIFTGGFGGSSAR---FAESQVARRYALRYDVPSRAILIETVSRTTRQNLIQ 110
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
+ +++ + I+VS H+ R+ + I+ AS + + S+
Sbjct: 111 ARQLMRVYGLRRAIVVSDPLHMARALRLCRELDIDALASATP-STRFRSLHTRWRFLLQE 169
Query: 224 ELALK 228
Sbjct: 170 VYFFH 174
>gi|50121633|ref|YP_050800.1| hypothetical protein ECA2709 [Pectobacterium atrosepticum SCRI1043]
gi|49612159|emb|CAG75609.1| putative vancomycin resistance protein [Pectobacterium atrosepticum
SCRI1043]
Length = 260
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 53/185 (28%), Gaps = 26/185 (14%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + R+ T+ Y S K
Sbjct: 29 WKTAPFIYDELQTLPKRQVGVVLGTA------KYYRTGVINQYYLFRMQGTINAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + GD E + L+ +GV DI L+ T + + +
Sbjct: 83 SYLLLS-----GDNALQSYNEPMTMRRDLIAAGVPPSDIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+++ +H +R+ H GI + P N ++E
Sbjct: 138 TNDFT---IITQRFHCERALFIALHLGIQAQCYAV----------PSPKNMMTVR--VRE 182
Query: 230 YIGIL 234
+ L
Sbjct: 183 FGARL 187
>gi|15891332|ref|NP_357004.1| hypothetical protein Atu3608 [Agrobacterium tumefaciens str. C58]
gi|15159715|gb|AAK89789.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 243
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 75/213 (35%), Gaps = 38/213 (17%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
++L I G L F+ + P G+ I++L G
Sbjct: 33 GLILVCVIALGAFSGGF---LWFADSVASMRPPEGARGDAIIVLTGG------------- 76
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
Y RI + + L + + + + + + + ++ + V+
Sbjct: 77 -----YQRIEQAVGLLRDGVGKRLLISGVNPA--TTRSQIRKMTQGSSDMFTCCVDM--- 126
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI--NTKASCS-- 204
+++DT NA ++S I++ +I++V++ YH+ RS ++ A
Sbjct: 127 --GYKAIDTIGNANEAASWIRDHNYSSIVVVTNNYHMHRSLHELRNASPQTEFIAYPVIS 184
Query: 205 -DYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
D + + + P + L EY+ + A
Sbjct: 185 ADLVRTNWFVEP-----DVVRTLLYEYLKFVAA 212
>gi|238799250|ref|ZP_04642697.1| hypothetical protein ymoll0001_39300 [Yersinia mollaretii ATCC
43969]
gi|238716915|gb|EEQ08784.1| hypothetical protein ymoll0001_39300 [Yersinia mollaretii ATCC
43969]
Length = 253
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 61/214 (28%), Gaps = 28/214 (13%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
K +S ++ + I+ + + Q + V+LG
Sbjct: 2 WKRLIISLIIIAGLLMVTAIVLDRWIS--WKTAPFIYDELQDLPHRQVGVVLGTAKYYRA 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ RI + Y S K + + GD E + L+
Sbjct: 60 GG------INQFYKYRIQGAINAYNSGKVSYLLLS-----GDNALQSYNEPMTMRRDLIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV DI L+ T + + + I+++ +H +R+ H GI +
Sbjct: 109 AGVAPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHMGIQAQ 165
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + ++E L
Sbjct: 166 CFAVPSPK------------DMLSVRVREIFARL 187
>gi|194336436|ref|YP_002018230.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308913|gb|ACF43613.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 196
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 75/213 (35%), Gaps = 26/213 (12%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ + L F+ +LL L + ++I++LG
Sbjct: 3 LFVKITLIFFLSLTTAAALLLSCLG---ILVSQHAADPEKCDVIIVLGG----------- 48
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+ R+ + LY + + T I D + + + +++ GV +
Sbjct: 49 ------DNGLRVRKGAELYNAGYASHVILTGI----DERFYRPSHPNWRERRMIALGVPK 98
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASC 203
IK++T+S T++ A+ +S+ ++ K+ I+VS H+ R + G +
Sbjct: 99 KAIKIDTKSKTTWEEAENTSNTMEKKGWKSAIIVSDPPHMLRLHQTWNRAFKGSSKTFIL 158
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+++ + N + + E L
Sbjct: 159 VSTTPSWWDRVLWWKNRQSYQFVISEIKKNLFY 191
>gi|222087356|ref|YP_002545893.1| hypothetical protein Arad_4209 [Agrobacterium radiobacter K84]
gi|221724804|gb|ACM27960.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 240
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 67/218 (30%), Gaps = 45/218 (20%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
F F++ F G+ L P + + I++L G
Sbjct: 37 WGGFAFVFLVAIVFGGFLHFAD----------SITTLKPPLEPKADAIIVLTGG------ 80
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
Y RI + + L ++ + + + G ++
Sbjct: 81 ------------YQRIDQAVELLRTGAGNRLLIS-----GAHPTTTPSQIRKLTQSPANL 123
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI--NT 199
DI ++DT NA+ ++ I K+I++V++ YH+ RS ++ +
Sbjct: 124 FNCCVDI--GYDAIDTIGNAREAAKWIHARGYKSILVVTNNYHMPRSLAELKYVDPATDF 181
Query: 200 KASCS---DYLNAYYSIIPLSANFYLTELALKEYIGIL 234
D + P + + EY +L
Sbjct: 182 IPYPVVNSDLKTKNWFTDPNA-----LRTMIYEYAKVL 214
>gi|213023249|ref|ZP_03337696.1| hypothetical protein Salmonelentericaenterica_11945 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 261
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
+ I+++ +H +R+ H GI + + +
Sbjct: 138 ---INDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|1771201|emb|CAA68042.1| ORF [Lactococcus lactis]
Length = 283
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/237 (15%), Positives = 85/237 (35%), Gaps = 31/237 (13%)
Query: 2 LLSWIFLIV-SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ FL++ + + + ++ +++ + + + L
Sbjct: 46 IVVLAFLLIDWVYLSMGRLPDSWIWLKILGIVYPVLSIYLAWQFGISFLS---SWVYGRR 102
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K+ V+LG G + + +RI ++ + + ++ SG
Sbjct: 103 VRKQRAAYHVVLGAGLIQGEHVGKL-------LGNRILAAVKAVRDNETI-----LVFSG 150
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G ++E+ +E G + LE QS T++N FSS +IK +
Sbjct: 151 GQGPDEKISEARAMQKYAVEVLGFPIERTMLEDQSRTTYENLVFSSRLIKEKF----MFF 206
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+S YH+ R+ L+ I+ + +A +Y ++E+I ++
Sbjct: 207 TSDYHVFRAALFAATLKIDAQG----------GKGGKTAMYYRVPAFIREFIAVMNY 253
>gi|261221047|ref|ZP_05935328.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997008|ref|ZP_06109565.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919631|gb|EEX86284.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262551476|gb|EEZ07466.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 254
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 40/230 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 45 RILRRLQPVSIILFLAVIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTG 95
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ + L K + + + + + L +
Sbjct: 96 G------------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRATHA 135
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-- 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 136 DKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSS 190
Query: 193 QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + S + + EY+ L A R
Sbjct: 191 RMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVRLG 237
>gi|332289791|ref|YP_004420643.1| hypothetical protein UMN179_01731 [Gallibacterium anatis UMN179]
gi|330432687|gb|AEC17746.1| hypothetical protein UMN179_01731 [Gallibacterium anatis UMN179]
Length = 242
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 8/138 (5%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + + Y+R+ L K K + + GD + E
Sbjct: 72 GLVLGTSKYFKNNTLNLFYYNRLSAAESLIKHHKVDYLLLS-----GDNRTLQYNEPQRM 126
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL+ GV + + T + + + K +++ +H +R+ +H
Sbjct: 127 FKDLLKMGVPSQTMFFDYAGFRTLDSVVRADKIFKAQSLT---IITQRFHCERALFIAKH 183
Query: 195 FGINTKASCSDYLNAYYS 212
+ I+ +D Y
Sbjct: 184 YDIDAICYEADNPEGYTW 201
>gi|325578193|ref|ZP_08148328.1| membrane protein SanA [Haemophilus parainfluenzae ATCC 33392]
gi|325159929|gb|EGC72058.1| membrane protein SanA [Haemophilus parainfluenzae ATCC 33392]
Length = 233
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 69/228 (30%), Gaps = 29/228 (12%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ L ++K+ L + I II + ++Q + + +
Sbjct: 13 ALLASLRLPLKKLLSYVLGFSLVALISCFIIDRAVSFYVQDR---VYEDVEILPHRHYAL 69
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + + R+ + L K + + GD + E
Sbjct: 70 VLGTSKYVTKGKTNKYYDY------RLEASKLLIDQDKVDYLLLS-----GDNRTIQYNE 118
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + ++ + + + ++S +H +R+ L
Sbjct: 119 PRTMFLDLRKMGVSESVMFKDFAGFRTLDSVVRANKVFQ---VPSFTIISQKFHCERALL 175
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H+ I+ + Y+ ++E + A
Sbjct: 176 IAKHYDIDAICFTAKQPEVYFGTR------------VREMFARVKAVL 211
>gi|169823893|ref|YP_001691504.1| hypothetical protein FMG_0196 [Finegoldia magna ATCC 29328]
gi|167830698|dbj|BAG07614.1| putative membrane protein [Finegoldia magna ATCC 29328]
Length = 308
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ Y ++ ++ KIF + +++ + ++ + LL +L YQ+ D + I
Sbjct: 89 LLYIAMIIVNLFKIFDLYKYIIGMNLYLSLMVLSHLLGNLIIKYQKFDT------DFDYI 142
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG IE S R+ + Y + K +I+I G +
Sbjct: 143 VVLGGSMKG--------IELSELIKQRMLTSFAYYTTNK------SIMIFSGGKSNGDIE 188
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKNIILVSSAYHL 185
ES+ N +E+ ++ DI LE +++T QN ++ +I+ K I ++++ +H
Sbjct: 189 ESVAMKNFAIENHIQDTDILLEKLAMNTMQNIEYVKKLIQQQDTDFVDKKICVITNNFHA 248
Query: 186 KRSQLYFQHF--GINTKASCSDYLNAYYSII 214
R++L + S++ + + +
Sbjct: 249 FRTKLICNKMKVNWTVIPTQSNFNSKISTYL 279
>gi|262340843|ref|YP_003283698.1| hypothetical protein BLBBGE_055 [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272180|gb|ACY40088.1| hypothetical protein BLBBGE_055 [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 198
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 56/172 (32%), Gaps = 20/172 (11%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I G + + + RI L+ K II GD ++
Sbjct: 37 DYIPYNTFGVVLGTSKYLHGGGVNAYFKYRIDAACSLFHHKK-----IRYIIVSGDNREK 91
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E + +L++ G+ I + ++T + + + ++S +H +
Sbjct: 92 NYNEPKMMKKELIKKGIPSHFIYEDLYGINTLHSVLRVYKIFNQKKFT---IISQKFHNE 148
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
R+ G++ + L + +++ L+E + A +
Sbjct: 149 RAIFIGNCLGLDVIGFNAKNLT------------FDSKIQLREVFARVKALW 188
>gi|227112052|ref|ZP_03825708.1| hypothetical protein PcarbP_03753 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 259
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 51/185 (27%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + R+ T+ Y S K
Sbjct: 29 WKTAPFIYDELQTLPKRQVGVVLGTA------KYYRTGVINQYYLFRMQGTINAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + GD E + L+ +GV DI L+ T + + +
Sbjct: 83 SYLLLS-----GDNALQSYNEPMTMRRDLIAAGVPPSDIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
+++ +H +R+ H GI + + +
Sbjct: 138 TNDFT---IITQRFHCERALFIALHLGIQAQCYAVPSPKNMMTVRVREFGARLGALFDLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 ILKRE 199
>gi|170767500|ref|ZP_02901953.1| protein SanA [Escherichia albertii TW07627]
gi|170123834|gb|EDS92765.1| protein SanA [Escherichia albertii TW07627]
Length = 239
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 48/160 (30%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLS-----GDNALQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV+ DI L+ T + + + I+++ +H +R+ H
Sbjct: 103 RKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALH 159
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + +S + +E
Sbjct: 160 MGIQAQCYAVPSPKDMWSVRIREFAARFGALADLYIFKRE 199
>gi|260425651|ref|ZP_05779631.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260423591|gb|EEX16841.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 165
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 20/180 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++D + ++LG E S R E RL+ + ++
Sbjct: 3 SGREDLPVALVLGAAVWPG-------GEASPTLRRRALEGARLWHAGAVRAVVGCG---- 51
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
H AE+ + ++GV D+ E +S T +N +F+ +++ + + +++VS
Sbjct: 52 -GVGVHPPAEAALIVEICRQAGVPARDLHREARSTTTEENIRFALPILERLAVREVVVVS 110
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
YHL R+ L + G+ + + + A +E + RG
Sbjct: 111 ERYHLPRALLVARRAGLVARGVAPSFRG--------ADPAGQLRAAAREVVAYGWYALRG 162
>gi|294498420|ref|YP_003562120.1| hypothetical protein BMQ_1655 [Bacillus megaterium QM B1551]
gi|294348357|gb|ADE68686.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 198
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 84/228 (36%), Gaps = 57/228 (25%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ IF + ++ F F G + L+ + ++I++L
Sbjct: 7 KRIKISIFMLGLGIIFFLFAG-----------------KELVVNEKPVKSDVIIVLSG-- 47
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
R+ + + LYK +I+S G + +
Sbjct: 48 ----------------DNDRLEKGIELYKKGYAAH----LILSNGQENN--------FYH 79
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ ESG+ D I LE + T +NA+F+ ++ N ++ I+VSS YH+KR++ F
Sbjct: 80 QAKESGIPEDSIILENHATSTTENAKFTKRLMMNYHFQSAIVVSSNYHMKRAEKNFNKEF 139
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALK------EYIGILIAYY 238
+T+ + + P E AL EY+ ++ Y+
Sbjct: 140 KDTQIQLTYCSSGSRYYNPQ----RWWETALNRKVTYTEYVKLIGNYF 183
>gi|225628868|ref|ZP_03786902.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254706062|ref|ZP_05167890.1| hypothetical protein BpinM_03433 [Brucella pinnipedialis
M163/99/10]
gi|254712252|ref|ZP_05174063.1| hypothetical protein BcetM6_02514 [Brucella ceti M644/93/1]
gi|254715323|ref|ZP_05177134.1| hypothetical protein BcetM_02529 [Brucella ceti M13/05/1]
gi|256029727|ref|ZP_05443341.1| hypothetical protein BpinM2_03558 [Brucella pinnipedialis
M292/94/1]
gi|256157879|ref|ZP_05455797.1| hypothetical protein BcetM4_03368 [Brucella ceti M490/95/1]
gi|256253159|ref|ZP_05458695.1| hypothetical protein BcetB_02424 [Brucella ceti B1/94]
gi|260167184|ref|ZP_05753995.1| Bme2 protein [Brucella sp. F5/99]
gi|261217053|ref|ZP_05931334.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261220265|ref|ZP_05934546.1| Bme2 [Brucella ceti B1/94]
gi|261313499|ref|ZP_05952696.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261319923|ref|ZP_05959120.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261756588|ref|ZP_06000297.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265986738|ref|ZP_06099295.1| Bme2 [Brucella pinnipedialis M292/94/1]
gi|265996388|ref|ZP_06108945.1| Bme2 [Brucella ceti M490/95/1]
gi|225616714|gb|EEH13762.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260918849|gb|EEX85502.1| Bme2 [Brucella ceti B1/94]
gi|260922142|gb|EEX88710.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292613|gb|EEX96109.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261302525|gb|EEY06022.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736572|gb|EEY24568.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|262550685|gb|EEZ06846.1| Bme2 [Brucella ceti M490/95/1]
gi|264658935|gb|EEZ29196.1| Bme2 [Brucella pinnipedialis M292/94/1]
Length = 205
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 22/170 (12%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I P R + +L+K + + GD +
Sbjct: 26 LQDDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA---TGDGDCLLN--------K 74
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ GV I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 75 HIMMAKGVPPSAILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 134
Query: 196 ----GINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +D + P+ E +KEY + G
Sbjct: 135 CPQMHFTSSPMADADMPGGFPGTPPV------IEHVVKEYAKLGWYLISG 178
>gi|253688059|ref|YP_003017249.1| hypothetical protein PC1_1672 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754637|gb|ACT12713.1| protein of unknown function DUF218 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 259
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/160 (13%), Positives = 46/160 (28%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + R+ T+ Y S K + + GD E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYLFRMQGTINAYNSGKVSYLLLS-----GDNALQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV DI L+ T + + + +++ +H +R+ H
Sbjct: 103 RRDLIAAGVPPSDIVLDYAGFRTLDSIVRTRKVFDTNDFT---IITQRFHCERALFIALH 159
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + + + + +E
Sbjct: 160 LGIQAQCYAVPSPKNMMTVRVREFGARLGALFDLYILKRE 199
>gi|324114440|gb|EGC08409.1| hypothetical protein ERIG_00979 [Escherichia fergusonii B253]
Length = 239
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLS-----GDNALQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV+ DI L+ T + + + I+++ +H +R+ H
Sbjct: 103 RKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALH 159
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + +S +E
Sbjct: 160 MGIQAQCYAVPSPKDMWSVRIREFAARFGALADLYFFKRE 199
>gi|218549557|ref|YP_002383348.1| hypothetical protein EFER_2229 [Escherichia fergusonii ATCC 35469]
gi|218357098|emb|CAQ89731.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
gi|325497957|gb|EGC95816.1| hypothetical protein ECD227_2054 [Escherichia fergusonii ECD227]
Length = 239
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLS-----GDNALQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV+ DI L+ T + + + I+++ +H +R+ H
Sbjct: 103 RKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALH 159
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + +S +E
Sbjct: 160 MGIQAQCYAVPSPKDMWSVRIREFAARFGALADLYFFKRE 199
>gi|318040912|ref|ZP_07972868.1| hypothetical protein SCB01_04359 [Synechococcus sp. CB0101]
Length = 232
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 75/230 (32%), Gaps = 45/230 (19%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
W + + + + M +L+S IG + L L P P + + VL
Sbjct: 44 VWWIARRPLPVVVAMVLIAVLYSPIGTTALSAWLQGQL------PPSVPAASQP--VAVL 95
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G I A R + +Y S ++
Sbjct: 96 LGRGPQIAAATTAEASRLV-----RDHAAVAVYVSG----------------------DA 128
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNIILVSSAYHLKRSQL 190
L GV I ++ + T++NA + + + ++ G + L++ + L R+
Sbjct: 129 FAAAQALQRQGVPAPLIAGDSCARTTWENATRTATWLRRHHPGAPVALITDPWQLPRATA 188
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
F+ + D PL + LAL+E L+ +G
Sbjct: 189 AFRRQDLVVMPIAVD---------PLLSAGQRNRLALRETAATLLYGLQG 229
>gi|194427136|ref|ZP_03059687.1| protein SanA [Escherichia coli B171]
gi|194414757|gb|EDX31028.1| protein SanA [Escherichia coli B171]
gi|323161771|gb|EFZ47652.1| sanA [Escherichia coli E128010]
Length = 239
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGAINAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|254361502|ref|ZP_04977641.1| possible membrane protein [Mannheimia haemolytica PHL213]
gi|153093016|gb|EDN74037.1| possible membrane protein [Mannheimia haemolytica PHL213]
Length = 227
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 16/179 (8%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
I ++ L ++ + + V+LG + +
Sbjct: 33 LLGIAILLVVDSLTSYIVRD--KIYTDSKQIPYREYAVVLGTAKFYSKDVINQYYKY--- 87
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ +L + K + + + GD + E + LL+ G+ IK +
Sbjct: 88 ---RLEAAKQLVQEGKVNQLLLS-----GDNKTPYYNEPKTMTSDLLKMGIATSKIKQDY 139
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
TF + + + K ++S +H +R+ + I+ + Y Y
Sbjct: 140 AGYTTFYSIIRAKKVYK---LPPFTIISQKFHCERALFIAKFRDIDAICYAATYPEGAY 195
>gi|290474001|ref|YP_003466875.1| putative vancomycin sensitivity, oxidoreductase [Xenorhabdus
bovienii SS-2004]
gi|289173308|emb|CBJ80083.1| putative vancomycin sensitivity, oxidoreductase [Xenorhabdus
bovienii SS-2004]
Length = 239
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 61/220 (27%), Gaps = 26/220 (11%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I + F+ ++L + I + + + ++LG
Sbjct: 1 MWKRLITGLVFIMAVLILTVIMLDRWIS-------WKTAPYIYDDLNQLPEREVGMVLGT 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
RI Y S K + + + GD + E I
Sbjct: 54 SKYYTSGAYNQYYFY------RIQGAANAYNSGKVNYLLLS-----GDNAQLSYNEPITM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+++G+ + ++ T + + + +++ +H +R+ H
Sbjct: 103 QKDFIKAGIPASKVIMDFAGFRTLDSIVRTRKVFNANNFT---IITQRFHCERALFIAMH 159
Query: 195 FGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKE 229
GI+ + + + + +E
Sbjct: 160 MGIDAQCYAVSSPKNMMIIRFREVFARLGALADLYILKRE 199
>gi|306843432|ref|ZP_07476033.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
gi|306276123|gb|EFM57823.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
Length = 250
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 40/230 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 41 RILRRLQPVSIILFLAVIAFLGGFFVFSEKVTG---------MQPPVLSEPAEAIVVLTG 91
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SR+ + L K + + + + + L +
Sbjct: 92 G------------------QSRVKAGINLLKERRGKRLLISGVHP--STNEEALQRATHA 131
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-- 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 132 DKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSS 186
Query: 193 QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + S + + EY+ L A R
Sbjct: 187 RMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVRLG 233
>gi|225387776|ref|ZP_03757540.1| hypothetical protein CLOSTASPAR_01546 [Clostridium asparagiforme
DSM 15981]
gi|225046110|gb|EEG56356.1| hypothetical protein CLOSTASPAR_01546 [Clostridium asparagiforme
DSM 15981]
Length = 275
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 86/262 (32%), Gaps = 55/262 (20%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FL+ W+ + R ++ ++ G + + + ++
Sbjct: 42 LFLVYGKWYYRRNADRIPRWVPVSVVTTCVAGLTVFAAVCIMVF------SGVAGSDPVG 95
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ +++LG + R+ + + + +++SGG Q
Sbjct: 96 LDYVIVLGA--------QGKEHTVNGSLKLRLDKAIEYVEENP----DTILVLSGGPMQG 143
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-------- 177
+E+ + + L +GV D + +E +S T +N FS +I+ +
Sbjct: 144 EEKSEAELMYDYLRYNGVRPDQMLMEKRSASTVENVAFSRLVIEQDRLARKRKREALFQP 203
Query: 178 -----------------LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSAN 219
+++S +H+ R++L + +GI N + + +
Sbjct: 204 VGPGVEPLAPDKPLEIGVLTSNFHVFRARLTARKWGIENVSGIAAKSDPVLFVHLC---- 259
Query: 220 FYLTELALKEYIGILIAYYRGN 241
++E I GN
Sbjct: 260 -------VRECASIFKDRLVGN 274
>gi|152971124|ref|YP_001336233.1| hypothetical protein KPN_02585 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262040162|ref|ZP_06013415.1| membrane protein SanA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150955973|gb|ABR78003.1| vancomycin sensitivity [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|259042515|gb|EEW43533.1| membrane protein SanA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 238
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L++ GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRRDLIKGGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + +S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMWSVRLREFGARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|332161106|ref|YP_004297683.1| hypothetical protein YE105_C1484 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665336|gb|ADZ41980.1| hypothetical protein YE105_C1484 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 251
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 60/215 (27%), Gaps = 29/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+++ + + + + + Q + V+LG
Sbjct: 2 WKRLIISLIIIAGLLMVTAIALDRWIS---WKTAPFIYDELQDLPHRQVGVVLGTAKYYK 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + GD H E + L+
Sbjct: 59 TGGINQFYQY------RIQGALNAYNSGKVSYLLLS-----GDNALHSYNEPMTMRRDLM 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + I+++ +H +R+ H GI
Sbjct: 108 AAGVPASDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAMHMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + ++E L
Sbjct: 165 QCFAVPSPK------------DMLNVRVREIFARL 187
>gi|213618662|ref|ZP_03372488.1| hypothetical protein SentesTyp_20225 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 221
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 11 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRY------RIQGALNAYNSGKV 64
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 65 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 119
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
+ I+++ +H +R+ H GI + + +
Sbjct: 120 ---INDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLY 176
Query: 225 LALKE 229
+ +E
Sbjct: 177 IFKRE 181
>gi|52424978|ref|YP_088115.1| SanA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307030|gb|AAU37530.1| SanA protein [Mannheimia succiniciproducens MBEL55E]
Length = 237
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/220 (12%), Positives = 70/220 (31%), Gaps = 20/220 (9%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
L S++++ + + + + ++ ++ V
Sbjct: 15 IVSFLAKSSLKRLVQTCAILAGIAIVSLATLDQMIGYSVRND---IYTDITKVPHRPYGV 71
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
LLG R P+ +R+ L+KS K + + GD + E
Sbjct: 72 LLGTA------KYFARNTPNLFYVNRLNAAEALFKSAKIDYLLLS-----GDNRTLQYNE 120
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + G+ + + ++ T + + + +++++ +H +R+
Sbjct: 121 PRTMFKDLRKKGIGEEFLYMDFAGFRTLDSIIRAKEIFNA---TPMVIITQRFHCERALF 177
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPL---SANFYLTELAL 227
+ I+ ++Y Y + + L EL +
Sbjct: 178 IAKFHHIDAICFAAEYPKDYPFVRFREVFARLLMLWELFI 217
>gi|301024366|ref|ZP_07188055.1| protein SanA [Escherichia coli MS 196-1]
gi|299880463|gb|EFI88674.1| protein SanA [Escherichia coli MS 196-1]
Length = 235
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 25 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGAINAYNSGKV 78
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 79 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFD 133
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 134 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLY 190
Query: 225 LALKE 229
+ +E
Sbjct: 191 IFKRE 195
>gi|306840763|ref|ZP_07473510.1| Bme2 protein [Brucella sp. BO2]
gi|306289158|gb|EFM60407.1| Bme2 protein [Brucella sp. BO2]
Length = 189
Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 22/166 (13%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I P R + +L+K + + GD +
Sbjct: 10 LQDDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA---TGDGDCLLN--------K 58
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ GV I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 59 HIMMAKGVPPSAILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 118
Query: 196 ----GINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +D + P+ E +KEY +
Sbjct: 119 CPQMHFASSPVADADMPGGFPGTPPV------IEHVVKEYAKLGWY 158
>gi|227325861|ref|ZP_03829885.1| hypothetical protein PcarcW_00504 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 259
Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 51/185 (27%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + R+ T+ Y S K
Sbjct: 29 WKTAPFIYDELQTLPKRQVGVVLGTA------KYYRTGVINQYYLFRMQGTINAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + GD E + L+ +GV DI L+ T + + +
Sbjct: 83 SYLLLS-----GDNALQSYNEPMTMRRDLIAAGVPPSDIVLDYAGFRTLDSIIRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
+++ +H +R+ H GI + + +
Sbjct: 138 TNDFT---IITQRFHCERALFIALHLGIQAQCYAVPSPKNMMTVRVREFGARLGALFDLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 ILKRE 199
>gi|308804261|ref|XP_003079443.1| unnamed protein product [Ostreococcus tauri]
gi|116057898|emb|CAL54101.1| unnamed protein product [Ostreococcus tauri]
Length = 417
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 9/146 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET---MRLYKSCKQHSMHCTII 117
+ + IV++ G T+P ++ R T +++ S +
Sbjct: 197 NDSEIVDAIVVVAGGIEADGTLPPWVTPRLDRARERFEATGGRVKILVSGSMTPHKPPPM 256
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNI 176
GG + + L+E GV + +T S+DT NA +S + + K +
Sbjct: 257 GPGGFNVHESTS----MASYLMERGVPATAVLKDTASMDTIGNAYYSLCLHAIPLGWKRV 312
Query: 177 ILVSSAYHLKRSQLYFQHF-GINTKA 201
+V+SA+H+ R++ F+ G+
Sbjct: 313 EVVTSAFHMARTRAAFEWVWGLTPHG 338
>gi|306836617|ref|ZP_07469584.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304567539|gb|EFM43137.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 199
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 49/170 (28%), Gaps = 23/170 (13%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+V+LG PS R+ L S I GG
Sbjct: 5 VKYVVVLG--------TAQYDGRPSRILAGRLRHAGELATS-----RGLPAITVGGQLPG 51
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E+ V + L E E + + + +++I + I+V+ H
Sbjct: 52 DRFTEAGVARDYLREHFPELQ----VSAVEEGLDTRESLAAVIDAYGLADAIIVTDPLHR 107
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
R+ + + G+N S + Y A P E G+
Sbjct: 108 LRTWVIAKQEGLNAHVSGTPYYPARRFSKPWWRYLA------HECGGLFY 151
>gi|15802700|ref|NP_288727.1| hypothetical protein Z3399 [Escherichia coli O157:H7 EDL933]
gi|15832290|ref|NP_311063.1| hypothetical protein ECs3036 [Escherichia coli O157:H7 str. Sakai]
gi|16130082|ref|NP_416649.1| vancomycin high temperature exclusion protein; mutants have a
defective envelope more permeable to vancomycin at 42
degrees [Escherichia coli str. K-12 substr. MG1655]
gi|26248525|ref|NP_754565.1| hypothetical protein c2677 [Escherichia coli CFT073]
gi|56480052|ref|NP_708044.2| hypothetical protein SF2229 [Shigella flexneri 2a str. 301]
gi|82543535|ref|YP_407482.1| hypothetical protein SBO_0997 [Shigella boydii Sb227]
gi|82777373|ref|YP_403722.1| hypothetical protein SDY_2143 [Shigella dysenteriae Sd197]
gi|89108961|ref|AP_002741.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|91211430|ref|YP_541416.1| hypothetical protein UTI89_C2417 [Escherichia coli UTI89]
gi|110642353|ref|YP_670083.1| hypothetical protein ECP_2183 [Escherichia coli 536]
gi|110806121|ref|YP_689641.1| hypothetical protein SFV_2219 [Shigella flexneri 5 str. 8401]
gi|117624346|ref|YP_853259.1| hypothetical protein APECO1_4406 [Escherichia coli APEC O1]
gi|157156428|ref|YP_001463495.1| hypothetical protein EcE24377A_2439 [Escherichia coli E24377A]
gi|157161624|ref|YP_001458942.1| hypothetical protein EcHS_A2278 [Escherichia coli HS]
gi|168750524|ref|ZP_02775546.1| protein SanA [Escherichia coli O157:H7 str. EC4113]
gi|168757726|ref|ZP_02782733.1| protein SanA [Escherichia coli O157:H7 str. EC4401]
gi|168763800|ref|ZP_02788807.1| protein SanA [Escherichia coli O157:H7 str. EC4501]
gi|168767757|ref|ZP_02792764.1| protein SanA [Escherichia coli O157:H7 str. EC4486]
gi|168773145|ref|ZP_02798152.1| protein SanA [Escherichia coli O157:H7 str. EC4196]
gi|168779987|ref|ZP_02804994.1| protein SanA [Escherichia coli O157:H7 str. EC4076]
gi|168788954|ref|ZP_02813961.1| protein SanA [Escherichia coli O157:H7 str. EC869]
gi|168801167|ref|ZP_02826174.1| protein SanA [Escherichia coli O157:H7 str. EC508]
gi|170019539|ref|YP_001724493.1| hypothetical protein EcolC_1504 [Escherichia coli ATCC 8739]
gi|170081767|ref|YP_001731087.1| hypothetical protein ECDH10B_2301 [Escherichia coli str. K-12
substr. DH10B]
gi|170683493|ref|YP_001744338.1| hypothetical protein EcSMS35_2291 [Escherichia coli SMS-3-5]
gi|188493447|ref|ZP_03000717.1| sanA protein [Escherichia coli 53638]
gi|191165351|ref|ZP_03027193.1| protein SanA [Escherichia coli B7A]
gi|191170117|ref|ZP_03031671.1| protein SanA [Escherichia coli F11]
gi|193062236|ref|ZP_03043331.1| protein SanA [Escherichia coli E22]
gi|193071089|ref|ZP_03052015.1| protein SanA [Escherichia coli E110019]
gi|194436045|ref|ZP_03068147.1| protein SanA [Escherichia coli 101-1]
gi|195935520|ref|ZP_03080902.1| hypothetical protein EscherichcoliO157_03527 [Escherichia coli
O157:H7 str. EC4024]
gi|208809602|ref|ZP_03251939.1| protein SanA [Escherichia coli O157:H7 str. EC4206]
gi|208812329|ref|ZP_03253658.1| protein SanA [Escherichia coli O157:H7 str. EC4045]
gi|208821654|ref|ZP_03261974.1| protein SanA [Escherichia coli O157:H7 str. EC4042]
gi|209395911|ref|YP_002271553.1| protein SanA [Escherichia coli O157:H7 str. EC4115]
gi|209919602|ref|YP_002293686.1| hypothetical protein ECSE_2411 [Escherichia coli SE11]
gi|215487365|ref|YP_002329796.1| hypothetical protein E2348C_2290 [Escherichia coli O127:H6 str.
E2348/69]
gi|217327663|ref|ZP_03443746.1| protein SanA [Escherichia coli O157:H7 str. TW14588]
gi|218559062|ref|YP_002391975.1| hypothetical protein ECS88_2290 [Escherichia coli S88]
gi|218690293|ref|YP_002398505.1| hypothetical protein ECED1_2591 [Escherichia coli ED1a]
gi|218695755|ref|YP_002403422.1| hypothetical protein EC55989_2394 [Escherichia coli 55989]
gi|218700616|ref|YP_002408245.1| hypothetical protein ECIAI39_2283 [Escherichia coli IAI39]
gi|218705672|ref|YP_002413191.1| hypothetical protein ECUMN_2477 [Escherichia coli UMN026]
gi|227887199|ref|ZP_04005004.1| membrane protein [Escherichia coli 83972]
gi|237704609|ref|ZP_04535090.1| vancomycin sensitivity [Escherichia sp. 3_2_53FAA]
gi|238901326|ref|YP_002927122.1| hypothetical protein BWG_1926 [Escherichia coli BW2952]
gi|253772929|ref|YP_003035760.1| hypothetical protein ECBD_1514 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162158|ref|YP_003045266.1| hypothetical protein ECB_02073 [Escherichia coli B str. REL606]
gi|254794043|ref|YP_003078880.1| hypothetical protein ECSP_3022 [Escherichia coli O157:H7 str.
TW14359]
gi|256017688|ref|ZP_05431553.1| hypothetical protein ShiD9_02145 [Shigella sp. D9]
gi|256022172|ref|ZP_05436037.1| hypothetical protein E4_02262 [Escherichia sp. 4_1_40B]
gi|260844750|ref|YP_003222528.1| hypothetical protein ECO103_2619 [Escherichia coli O103:H2 str.
12009]
gi|260856117|ref|YP_003230008.1| hypothetical protein ECO26_3056 [Escherichia coli O26:H11 str.
11368]
gi|260868846|ref|YP_003235248.1| hypothetical protein ECO111_2861 [Escherichia coli O111:H- str.
11128]
gi|261223397|ref|ZP_05937678.1| hypothetical protein EscherichiacoliO157_02144 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259053|ref|ZP_05951586.1| hypothetical protein EscherichiacoliO157EcO_25092 [Escherichia coli
O157:H7 str. FRIK966]
gi|291283398|ref|YP_003500216.1| hypothetical protein G2583_2687 [Escherichia coli O55:H7 str.
CB9615]
gi|293405612|ref|ZP_06649604.1| hypothetical protein ECGG_00963 [Escherichia coli FVEC1412]
gi|293410503|ref|ZP_06654079.1| hypothetical protein ECEG_01467 [Escherichia coli B354]
gi|293415427|ref|ZP_06658070.1| hypothetical protein ECDG_01989 [Escherichia coli B185]
gi|293446494|ref|ZP_06662916.1| hypothetical protein ECCG_00642 [Escherichia coli B088]
gi|298381293|ref|ZP_06990892.1| hypothetical protein ECFG_01022 [Escherichia coli FVEC1302]
gi|300822589|ref|ZP_07102727.1| protein SanA [Escherichia coli MS 119-7]
gi|300897800|ref|ZP_07116193.1| protein SanA [Escherichia coli MS 198-1]
gi|300902207|ref|ZP_07120207.1| protein SanA [Escherichia coli MS 84-1]
gi|300918784|ref|ZP_07135353.1| protein SanA [Escherichia coli MS 115-1]
gi|300926246|ref|ZP_07142049.1| protein SanA [Escherichia coli MS 182-1]
gi|300930373|ref|ZP_07145782.1| protein SanA [Escherichia coli MS 187-1]
gi|300935066|ref|ZP_07150097.1| protein SanA [Escherichia coli MS 21-1]
gi|300950097|ref|ZP_07164044.1| protein SanA [Escherichia coli MS 116-1]
gi|300955834|ref|ZP_07168175.1| protein SanA [Escherichia coli MS 175-1]
gi|300981481|ref|ZP_07175562.1| protein SanA [Escherichia coli MS 200-1]
gi|300982858|ref|ZP_07176322.1| protein SanA [Escherichia coli MS 45-1]
gi|301021091|ref|ZP_07185132.1| protein SanA [Escherichia coli MS 69-1]
gi|301048880|ref|ZP_07195873.1| protein SanA [Escherichia coli MS 185-1]
gi|301306538|ref|ZP_07212602.1| protein SanA [Escherichia coli MS 124-1]
gi|301328623|ref|ZP_07221684.1| protein SanA [Escherichia coli MS 78-1]
gi|301644161|ref|ZP_07244169.1| protein SanA [Escherichia coli MS 146-1]
gi|306814741|ref|ZP_07448903.1| hypothetical protein ECNC101_21907 [Escherichia coli NC101]
gi|307138803|ref|ZP_07498159.1| hypothetical protein EcolH7_11856 [Escherichia coli H736]
gi|307311277|ref|ZP_07590921.1| protein of unknown function DUF218 [Escherichia coli W]
gi|309788027|ref|ZP_07682636.1| sanA [Shigella dysenteriae 1617]
gi|309793022|ref|ZP_07687450.1| protein SanA [Escherichia coli MS 145-7]
gi|312967437|ref|ZP_07781652.1| sanA [Escherichia coli 2362-75]
gi|312973607|ref|ZP_07787779.1| sanA [Escherichia coli 1827-70]
gi|331642769|ref|ZP_08343904.1| protein SanA [Escherichia coli H736]
gi|331647795|ref|ZP_08348887.1| protein SanA [Escherichia coli M605]
gi|331653573|ref|ZP_08354574.1| protein SanA [Escherichia coli M718]
gi|331658223|ref|ZP_08359185.1| protein SanA [Escherichia coli TA206]
gi|331663646|ref|ZP_08364556.1| protein SanA [Escherichia coli TA143]
gi|331668843|ref|ZP_08369691.1| protein SanA [Escherichia coli TA271]
gi|331673672|ref|ZP_08374435.1| protein SanA [Escherichia coli TA280]
gi|331678092|ref|ZP_08378767.1| protein SanA [Escherichia coli H591]
gi|331683821|ref|ZP_08384417.1| protein SanA [Escherichia coli H299]
gi|332278702|ref|ZP_08391115.1| vancomycin sensitivity protein [Shigella sp. D9]
gi|84028417|sp|P0AFY4|SANA_ECO57 RecName: Full=Protein sanA
gi|84028418|sp|P0AFY3|SANA_ECOL6 RecName: Full=Protein sanA
gi|84028419|sp|P0AFY2|SANA_ECOLI RecName: Full=Protein sanA
gi|84028420|sp|P0AFY5|SANA_SHIFL RecName: Full=Protein sanA
gi|12516461|gb|AAG57282.1|AE005446_10 vancomycin sensitivity [Escherichia coli O157:H7 str. EDL933]
gi|26108930|gb|AAN81133.1|AE016763_92 SanA protein [Escherichia coli CFT073]
gi|1788466|gb|AAC75205.1| vancomycin high temperature exclusion protein; mutants have a
defective envelope more permeable to vancomycin at 42
degrees [Escherichia coli str. K-12 substr. MG1655]
gi|13362505|dbj|BAB36459.1| vancomycin sensitivity [Escherichia coli O157:H7 str. Sakai]
gi|56383603|gb|AAN43751.2| vancomycin resistance protein [Shigella flexneri 2a str. 301]
gi|81241521|gb|ABB62231.1| vancomycin sensitivity [Shigella dysenteriae Sd197]
gi|81244946|gb|ABB65654.1| vancomycin sensitivity [Shigella boydii Sb227]
gi|85675258|dbj|BAE76621.1| hypothetical protein [Escherichia coli str. K12 substr. W3110]
gi|91073004|gb|ABE07885.1| SanA protein [Escherichia coli UTI89]
gi|110343945|gb|ABG70182.1| vancomycin resistance SanA protein [Escherichia coli 536]
gi|110615669|gb|ABF04336.1| vancomycin sensitivity [Shigella flexneri 5 str. 8401]
gi|115513470|gb|ABJ01545.1| putative vancomycin sensitivity protein [Escherichia coli APEC O1]
gi|157067304|gb|ABV06559.1| protein SanA [Escherichia coli HS]
gi|157078458|gb|ABV18166.1| protein SanA [Escherichia coli E24377A]
gi|169754467|gb|ACA77166.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
gi|169889602|gb|ACB03309.1| predicted protein [Escherichia coli str. K-12 substr. DH10B]
gi|170521211|gb|ACB19389.1| protein SanA [Escherichia coli SMS-3-5]
gi|187771031|gb|EDU34875.1| protein SanA [Escherichia coli O157:H7 str. EC4196]
gi|188015314|gb|EDU53436.1| protein SanA [Escherichia coli O157:H7 str. EC4113]
gi|188488646|gb|EDU63749.1| sanA protein [Escherichia coli 53638]
gi|189001931|gb|EDU70917.1| protein SanA [Escherichia coli O157:H7 str. EC4076]
gi|189355324|gb|EDU73743.1| protein SanA [Escherichia coli O157:H7 str. EC4401]
gi|189362843|gb|EDU81262.1| protein SanA [Escherichia coli O157:H7 str. EC4486]
gi|189366094|gb|EDU84510.1| protein SanA [Escherichia coli O157:H7 str. EC4501]
gi|189371366|gb|EDU89782.1| protein SanA [Escherichia coli O157:H7 str. EC869]
gi|189376621|gb|EDU95037.1| protein SanA [Escherichia coli O157:H7 str. EC508]
gi|190904514|gb|EDV64221.1| protein SanA [Escherichia coli B7A]
gi|190909633|gb|EDV69218.1| protein SanA [Escherichia coli F11]
gi|192931902|gb|EDV84501.1| protein SanA [Escherichia coli E22]
gi|192955612|gb|EDV86089.1| protein SanA [Escherichia coli E110019]
gi|194424773|gb|EDX40758.1| protein SanA [Escherichia coli 101-1]
gi|208729403|gb|EDZ79004.1| protein SanA [Escherichia coli O157:H7 str. EC4206]
gi|208733606|gb|EDZ82293.1| protein SanA [Escherichia coli O157:H7 str. EC4045]
gi|208741777|gb|EDZ89459.1| protein SanA [Escherichia coli O157:H7 str. EC4042]
gi|209157311|gb|ACI34744.1| protein SanA [Escherichia coli O157:H7 str. EC4115]
gi|209766308|gb|ACI81466.1| vancomycin sensitivity [Escherichia coli]
gi|209766310|gb|ACI81467.1| vancomycin sensitivity [Escherichia coli]
gi|209766312|gb|ACI81468.1| vancomycin sensitivity [Escherichia coli]
gi|209766314|gb|ACI81469.1| vancomycin sensitivity [Escherichia coli]
gi|209766316|gb|ACI81470.1| vancomycin sensitivity [Escherichia coli]
gi|209912861|dbj|BAG77935.1| vancomycin resistance protein [Escherichia coli SE11]
gi|215265437|emb|CAS09838.1| vancomycin sensitivity protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217320030|gb|EEC28455.1| protein SanA [Escherichia coli O157:H7 str. TW14588]
gi|218352487|emb|CAU98264.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218365831|emb|CAR03572.1| conserved hypothetical protein [Escherichia coli S88]
gi|218370602|emb|CAR18409.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218427857|emb|CAR08772.2| conserved hypothetical protein [Escherichia coli ED1a]
gi|218432769|emb|CAR13663.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|222033905|emb|CAP76646.1| Protein sanA [Escherichia coli LF82]
gi|226900975|gb|EEH87234.1| vancomycin sensitivity [Escherichia sp. 3_2_53FAA]
gi|227835549|gb|EEJ46015.1| membrane protein [Escherichia coli 83972]
gi|238863002|gb|ACR65000.1| predicted protein [Escherichia coli BW2952]
gi|242377786|emb|CAQ32549.1| vancomycin sensitivity [Escherichia coli BL21(DE3)]
gi|253323973|gb|ACT28575.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974059|gb|ACT39730.1| hypothetical protein ECB_02073 [Escherichia coli B str. REL606]
gi|253978227|gb|ACT43897.1| hypothetical protein ECD_02073 [Escherichia coli BL21(DE3)]
gi|254593443|gb|ACT72804.1| predicted protein [Escherichia coli O157:H7 str. TW14359]
gi|257754766|dbj|BAI26268.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257759897|dbj|BAI31394.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257765202|dbj|BAI36697.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|260448762|gb|ACX39184.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|281179236|dbj|BAI55566.1| vancomycin resistance protein [Escherichia coli SE15]
gi|281601601|gb|ADA74585.1| Protein sanA [Shigella flexneri 2002017]
gi|284922129|emb|CBG35210.1| putative exported protein [Escherichia coli 042]
gi|290763271|gb|ADD57232.1| hypothetical protein G2583_2687 [Escherichia coli O55:H7 str.
CB9615]
gi|291323324|gb|EFE62752.1| hypothetical protein ECCG_00642 [Escherichia coli B088]
gi|291427820|gb|EFF00847.1| hypothetical protein ECGG_00963 [Escherichia coli FVEC1412]
gi|291433075|gb|EFF06054.1| hypothetical protein ECDG_01989 [Escherichia coli B185]
gi|291470971|gb|EFF13455.1| hypothetical protein ECEG_01467 [Escherichia coli B354]
gi|294491745|gb|ADE90501.1| protein SanA [Escherichia coli IHE3034]
gi|298278735|gb|EFI20249.1| hypothetical protein ECFG_01022 [Escherichia coli FVEC1302]
gi|300299256|gb|EFJ55641.1| protein SanA [Escherichia coli MS 185-1]
gi|300307554|gb|EFJ62074.1| protein SanA [Escherichia coli MS 200-1]
gi|300317301|gb|EFJ67085.1| protein SanA [Escherichia coli MS 175-1]
gi|300358515|gb|EFJ74385.1| protein SanA [Escherichia coli MS 198-1]
gi|300398272|gb|EFJ81810.1| protein SanA [Escherichia coli MS 69-1]
gi|300405726|gb|EFJ89264.1| protein SanA [Escherichia coli MS 84-1]
gi|300408658|gb|EFJ92196.1| protein SanA [Escherichia coli MS 45-1]
gi|300414027|gb|EFJ97337.1| protein SanA [Escherichia coli MS 115-1]
gi|300417675|gb|EFK00986.1| protein SanA [Escherichia coli MS 182-1]
gi|300450587|gb|EFK14207.1| protein SanA [Escherichia coli MS 116-1]
gi|300459647|gb|EFK23140.1| protein SanA [Escherichia coli MS 21-1]
gi|300461695|gb|EFK25188.1| protein SanA [Escherichia coli MS 187-1]
gi|300524789|gb|EFK45858.1| protein SanA [Escherichia coli MS 119-7]
gi|300838239|gb|EFK65999.1| protein SanA [Escherichia coli MS 124-1]
gi|300845015|gb|EFK72775.1| protein SanA [Escherichia coli MS 78-1]
gi|301077459|gb|EFK92265.1| protein SanA [Escherichia coli MS 146-1]
gi|305852135|gb|EFM52587.1| hypothetical protein ECNC101_21907 [Escherichia coli NC101]
gi|306908783|gb|EFN39280.1| protein of unknown function DUF218 [Escherichia coli W]
gi|307554213|gb|ADN46988.1| vancomycin sensitivity SanA protein [Escherichia coli ABU 83972]
gi|307626315|gb|ADN70619.1| hypothetical protein UM146_06070 [Escherichia coli UM146]
gi|308123308|gb|EFO60570.1| protein SanA [Escherichia coli MS 145-7]
gi|308924161|gb|EFP69659.1| sanA [Shigella dysenteriae 1617]
gi|309702457|emb|CBJ01783.1| putative exported protein [Escherichia coli ETEC H10407]
gi|310332202|gb|EFP99437.1| sanA [Escherichia coli 1827-70]
gi|312287634|gb|EFR15539.1| sanA [Escherichia coli 2362-75]
gi|312946762|gb|ADR27589.1| hypothetical protein NRG857_10875 [Escherichia coli O83:H1 str. NRG
857C]
gi|315061453|gb|ADT75780.1| conserved hypothetical protein [Escherichia coli W]
gi|315136777|dbj|BAJ43936.1| hypothetical protein ECDH1ME8569_2080 [Escherichia coli DH1]
gi|315255344|gb|EFU35312.1| protein SanA [Escherichia coli MS 85-1]
gi|315285785|gb|EFU45225.1| protein SanA [Escherichia coli MS 110-3]
gi|315294491|gb|EFU53839.1| protein SanA [Escherichia coli MS 153-1]
gi|315297992|gb|EFU57262.1| protein SanA [Escherichia coli MS 16-3]
gi|315615383|gb|EFU96015.1| sanA [Escherichia coli 3431]
gi|320176617|gb|EFW51659.1| SanA protein [Shigella dysenteriae CDC 74-1112]
gi|320178908|gb|EFW53871.1| SanA protein [Shigella boydii ATCC 9905]
gi|320186773|gb|EFW61495.1| SanA protein [Shigella flexneri CDC 796-83]
gi|320192233|gb|EFW66878.1| SanA protein [Escherichia coli O157:H7 str. EC1212]
gi|320196013|gb|EFW70637.1| SanA protein [Escherichia coli WV_060327]
gi|320641215|gb|EFX10693.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H7 str. G5101]
gi|320646603|gb|EFX15514.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H- str. 493-89]
gi|320651858|gb|EFX20233.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H- str. H 2687]
gi|320657582|gb|EFX25380.1| vancomycin high temperature exclusion protein [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320663188|gb|EFX30497.1| vancomycin high temperature exclusion protein [Escherichia coli
O55:H7 str. USDA 5905]
gi|320667939|gb|EFX34842.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H7 str. LSU-61]
gi|323152180|gb|EFZ38470.1| sanA [Escherichia coli EPECa14]
gi|323171795|gb|EFZ57439.1| sanA [Escherichia coli LT-68]
gi|323176960|gb|EFZ62550.1| sanA [Escherichia coli 1180]
gi|323188131|gb|EFZ73426.1| sanA [Escherichia coli RN587/1]
gi|323377966|gb|ADX50234.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|323936758|gb|EGB33043.1| hypothetical protein ERCG_02013 [Escherichia coli E1520]
gi|323940787|gb|EGB36975.1| hypothetical protein ERDG_02564 [Escherichia coli E482]
gi|323944960|gb|EGB41025.1| hypothetical protein EREG_03415 [Escherichia coli H120]
gi|323951940|gb|EGB47814.1| hypothetical protein ERKG_01652 [Escherichia coli H252]
gi|323955909|gb|EGB51662.1| hypothetical protein ERLG_02688 [Escherichia coli H263]
gi|323961608|gb|EGB57214.1| hypothetical protein ERGG_01914 [Escherichia coli H489]
gi|323972974|gb|EGB68171.1| hypothetical protein ERHG_01084 [Escherichia coli TA007]
gi|324006549|gb|EGB75768.1| protein SanA [Escherichia coli MS 57-2]
gi|324013975|gb|EGB83194.1| protein SanA [Escherichia coli MS 60-1]
gi|324020612|gb|EGB89831.1| protein SanA [Escherichia coli MS 117-3]
gi|324118016|gb|EGC11915.1| hypothetical protein ERBG_02312 [Escherichia coli E1167]
gi|326339494|gb|EGD63305.1| SanA protein [Escherichia coli O157:H7 str. 1125]
gi|326343955|gb|EGD67716.1| SanA protein [Escherichia coli O157:H7 str. 1044]
gi|330911977|gb|EGH40487.1| SanA protein [Escherichia coli AA86]
gi|331039567|gb|EGI11787.1| protein SanA [Escherichia coli H736]
gi|331043519|gb|EGI15657.1| protein SanA [Escherichia coli M605]
gi|331048422|gb|EGI20498.1| protein SanA [Escherichia coli M718]
gi|331056471|gb|EGI28480.1| protein SanA [Escherichia coli TA206]
gi|331059445|gb|EGI31422.1| protein SanA [Escherichia coli TA143]
gi|331064037|gb|EGI35948.1| protein SanA [Escherichia coli TA271]
gi|331068945|gb|EGI40337.1| protein SanA [Escherichia coli TA280]
gi|331074552|gb|EGI45872.1| protein SanA [Escherichia coli H591]
gi|331078773|gb|EGI49975.1| protein SanA [Escherichia coli H299]
gi|332093241|gb|EGI98301.1| sanA [Shigella boydii 5216-82]
gi|332097513|gb|EGJ02493.1| sanA [Shigella boydii 3594-74]
gi|332101054|gb|EGJ04400.1| vancomycin sensitivity protein [Shigella sp. D9]
gi|332343922|gb|AEE57256.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332754776|gb|EGJ85141.1| sanA [Shigella flexneri 4343-70]
gi|332755182|gb|EGJ85546.1| sanA [Shigella flexneri K-671]
gi|332756426|gb|EGJ86777.1| sanA [Shigella flexneri 2747-71]
gi|333001279|gb|EGK20847.1| sanA [Shigella flexneri VA-6]
gi|333001911|gb|EGK21477.1| sanA [Shigella flexneri K-218]
gi|333002863|gb|EGK22419.1| sanA [Shigella flexneri K-272]
gi|333016609|gb|EGK35938.1| sanA [Shigella flexneri K-304]
gi|333016866|gb|EGK36190.1| sanA [Shigella flexneri K-227]
Length = 239
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGAINAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|311739886|ref|ZP_07713720.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304959|gb|EFQ81028.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 147
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 35/161 (21%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
P SR+ + + LY + II+S G E+ L+E GV +
Sbjct: 15 GYPGAMLRSRLDKALALYSGQQ-------IIVS-------GRGEAGPMATYLIERGVPAE 60
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ +E ++ T +N + + + + +V++ +H+ R+ L+ H GI + +
Sbjct: 61 RVVVEPEATSTNENLENAHRL---APDAVLHVVTNDFHILRTALWAWHLGIAVQLHPA-- 115
Query: 207 LNAYYSIIPLSANFYLTELALKEYIG-------ILIAYYRG 240
+ ++P + L+E + I+ RG
Sbjct: 116 -RTPWRLMPRNY--------LREVLATPHSAARIVWRRMRG 147
>gi|238793455|ref|ZP_04637080.1| hypothetical protein yinte0001_23610 [Yersinia intermedia ATCC
29909]
gi|238727228|gb|EEQ18757.1| hypothetical protein yinte0001_23610 [Yersinia intermedia ATCC
29909]
Length = 253
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 61/214 (28%), Gaps = 28/214 (13%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
K +S ++ + I+ + + Q + V+LG
Sbjct: 2 WKRLIISLIIIAGLLMVTAIVLDRWIS--WKTAPFIYDELQDLPHRQVGVVLGTAKYYRT 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ RI + Y S K + + GD E + L+
Sbjct: 60 GGINQFYQY------RIQGAINAYNSGKVSYLLLS-----GDNALQSYNEPMTMRRDLIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV DI L+ T + + + I+++ +H +R+ H GI +
Sbjct: 109 AGVAPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHMGIQAQ 165
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + ++E L
Sbjct: 166 CFAVPSPK------------DMLNVRVREIFARL 187
>gi|85058944|ref|YP_454646.1| hypothetical protein SG0966 [Sodalis glossinidius str. 'morsitans']
gi|84779464|dbj|BAE74241.1| vancomycin resistance protein [Sodalis glossinidius str.
'morsitans']
Length = 262
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 55/215 (25%), Gaps = 30/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R IF + + + + +P D + G +
Sbjct: 3 KRLIFTLLIIAGVLVLTAVSL----------DRWISWKTAPFIYDDLTALPHRQVGVVLG 52
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K + + GD E + L+
Sbjct: 53 TAKYYRTGVINQYYLYRIQGALNAYNSGKVSYLLLS-----GDNALQSYNEPVTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ D L+ T + + + +++ +H +R+ + GI
Sbjct: 108 AQGMPAADTVLDFAGFRTLDSIIRTRKVFDTNDFT---IITQRFHCERALFIALNMGIQA 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ P N L+E L
Sbjct: 165 QCYAV----------PSPKNMLSVR--LREIGARL 187
>gi|161502667|ref|YP_001569779.1| hypothetical protein SARI_00714 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160864014|gb|ABX20637.1| hypothetical protein SARI_00714 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 239
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 53/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + + +
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|16765514|ref|NP_461129.1| hypothetical protein STM2184 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56412902|ref|YP_149977.1| hypothetical protein SPA0667 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161613124|ref|YP_001587089.1| hypothetical protein SPAB_00832 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167551140|ref|ZP_02344895.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167991111|ref|ZP_02572210.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168229539|ref|ZP_02654597.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168236353|ref|ZP_02661411.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168242270|ref|ZP_02667202.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168259475|ref|ZP_02681448.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168466136|ref|ZP_02700006.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168818106|ref|ZP_02830106.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444390|ref|YP_002041455.1| hypothetical protein SNSL254_A2374 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451491|ref|YP_002046237.1| hypothetical protein SeHA_C2419 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194471005|ref|ZP_03076989.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194737817|ref|YP_002115273.1| hypothetical protein SeSA_A2423 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250828|ref|YP_002147155.1| hypothetical protein SeAg_B2330 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262385|ref|ZP_03162459.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197361833|ref|YP_002141469.1| hypothetical protein SSPA0626 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198245373|ref|YP_002216268.1| hypothetical protein SeD_A2531 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200388117|ref|ZP_03214729.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204929219|ref|ZP_03220362.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205353319|ref|YP_002227120.1| hypothetical protein SG2220 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207857618|ref|YP_002244269.1| hypothetical protein SEN2177 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224583315|ref|YP_002637113.1| hypothetical protein SPC_1518 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912626|ref|ZP_04656463.1| hypothetical protein SentesTe_16047 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|16420721|gb|AAL21088.1| vancomycin sensitivity protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56127159|gb|AAV76665.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161362488|gb|ABX66256.1| hypothetical protein SPAB_00832 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403053|gb|ACF63275.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194409795|gb|ACF70014.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194457369|gb|EDX46208.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194713319|gb|ACF92540.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195631432|gb|EDX49992.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197093309|emb|CAR58757.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197214531|gb|ACH51928.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197240640|gb|EDY23260.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197290569|gb|EDY29924.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197939889|gb|ACH77222.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199605215|gb|EDZ03760.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204321763|gb|EDZ06962.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205273100|emb|CAR38055.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324029|gb|EDZ11868.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205330585|gb|EDZ17349.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205335954|gb|EDZ22718.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205338626|gb|EDZ25390.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205344953|gb|EDZ31717.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350832|gb|EDZ37463.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206709421|emb|CAR33762.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467842|gb|ACN45672.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247398|emb|CBG25223.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994249|gb|ACY89134.1| hypothetical protein STM14_2691 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158745|emb|CBW18257.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913174|dbj|BAJ37148.1| hypothetical protein STMDT12_C22050 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320086623|emb|CBY96394.1| Protein sanA [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321224838|gb|EFX49901.1| SanA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322615211|gb|EFY12133.1| hypothetical protein SEEM315_00395 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322617802|gb|EFY14698.1| hypothetical protein SEEM971_13850 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624604|gb|EFY21435.1| hypothetical protein SEEM973_15164 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626945|gb|EFY23741.1| hypothetical protein SEEM974_10815 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634131|gb|EFY30867.1| hypothetical protein SEEM201_06316 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635678|gb|EFY32388.1| hypothetical protein SEEM202_16634 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640187|gb|EFY36851.1| hypothetical protein SEEM954_05092 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646390|gb|EFY42902.1| hypothetical protein SEEM054_09695 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322656478|gb|EFY52767.1| hypothetical protein SEEM965_08487 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661454|gb|EFY57678.1| hypothetical protein SEEM19N_04684 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322665658|gb|EFY61842.1| hypothetical protein SEEM801_13855 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667182|gb|EFY63349.1| hypothetical protein SEEM507_08975 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671188|gb|EFY67316.1| hypothetical protein SEEM877_07642 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675172|gb|EFY71249.1| hypothetical protein SEEM867_05427 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680780|gb|EFY76815.1| hypothetical protein SEEM180_14727 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686955|gb|EFY82932.1| hypothetical protein SEEM600_00620 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323130511|gb|ADX17941.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323192719|gb|EFZ77946.1| hypothetical protein SEEM581_11841 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198849|gb|EFZ83948.1| hypothetical protein SEEM501_02045 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323205141|gb|EFZ90119.1| hypothetical protein SEEM460_14111 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208184|gb|EFZ93128.1| hypothetical protein SEEM020_21612 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213532|gb|EFZ98323.1| hypothetical protein SEEM6152_03680 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215791|gb|EGA00534.1| hypothetical protein SEEM0077_09617 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221290|gb|EGA05713.1| hypothetical protein SEEM0047_01257 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323223844|gb|EGA08147.1| hypothetical protein SEEM0055_05621 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231237|gb|EGA15352.1| hypothetical protein SEEM0052_15697 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233671|gb|EGA17763.1| hypothetical protein SEEM3312_00927 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237741|gb|EGA21801.1| hypothetical protein SEEM5258_18220 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245724|gb|EGA29718.1| hypothetical protein SEEM1156_11185 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246538|gb|EGA30517.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323253017|gb|EGA36850.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323254775|gb|EGA38578.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323259525|gb|EGA43160.1| hypothetical protein SEEM8284_19170 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323268308|gb|EGA51783.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323271903|gb|EGA55319.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326624019|gb|EGE30364.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
gi|326628408|gb|EGE34751.1| Vancomycin sensitivity protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332989118|gb|AEF08101.1| hypothetical protein STMUK_2214 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 239
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 53/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + + +
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|238761078|ref|ZP_04622055.1| hypothetical protein ykris0001_34230 [Yersinia kristensenii ATCC
33638]
gi|238761331|ref|ZP_04622307.1| hypothetical protein ykris0001_20640 [Yersinia kristensenii ATCC
33638]
gi|238700305|gb|EEP93046.1| hypothetical protein ykris0001_20640 [Yersinia kristensenii ATCC
33638]
gi|238700558|gb|EEP93298.1| hypothetical protein ykris0001_34230 [Yersinia kristensenii ATCC
33638]
Length = 275
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 59/213 (27%), Gaps = 27/213 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ +++ + I + Q + V+LG
Sbjct: 2 WKRLIISLIIIAGLLMVTAIALDRWIS-WKTAPFIYDELQDLPHRQVGVVLGTAKYYRTG 60
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ RI + Y S K + + GD H E + L+ +
Sbjct: 61 GINQFYQY------RIQGALNAYNSGKVSYLLLS-----GDNALHSYNEPMTMRRDLIAA 109
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV DI L+ T + + + I+++ +H +R+ H GI +
Sbjct: 110 GVAPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAMHMGIQAQC 166
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + ++E L
Sbjct: 167 FAVPSPK------------DMLNVRVREIFARL 187
>gi|15966410|ref|NP_386763.1| hypothetical protein SMc00715 [Sinorhizobium meliloti 1021]
gi|307300553|ref|ZP_07580333.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|307318418|ref|ZP_07597853.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|15075681|emb|CAC47236.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896100|gb|EFN26851.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306904719|gb|EFN35303.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 232
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 75/222 (33%), Gaps = 35/222 (15%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +R+ FF+ L G+ + L P + IV+L G
Sbjct: 23 KVLRRGFFVLLAFLTVFIAGFLQFADTVAS----------LQPPATPKADAIVVLTGGFQ 72
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
RI + + L K + + + + + + +
Sbjct: 73 ------------------RIDQAVDLLKLGAGKRLLISGVHP--STTRSQIRRNTQSSAD 112
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L + V+ ++DT NA +S I+N + I++V++ YH+ RS L +
Sbjct: 113 LFKCCVDI-----GHAAIDTIGNATETSLWIRNRGYRTILVVTNNYHMPRSLLELRRARP 167
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
T+ +N+ N + + L EY +A R
Sbjct: 168 ETEFIAYPVVNSDLKTTNWLRNPLVLKAILLEYGKYSVATLR 209
>gi|118580859|ref|YP_902109.1| hypothetical protein Ppro_2446 [Pelobacter propionicus DSM 2379]
gi|118503569|gb|ABL00052.1| protein of unknown function DUF218 [Pelobacter propionicus DSM
2379]
Length = 206
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 77/225 (34%), Gaps = 35/225 (15%)
Query: 18 QSIRKIFFMSCFMLLFSFI-GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +R +F ++ L+ + L L + G+ +L G
Sbjct: 7 RYVRWLFIVAALWLILVAFPSVPSVRAWLAAPL--------VVQNMHARGDACYVLAGG- 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ---KHGLAESIV 133
+ R+ L + + + S G + + + +
Sbjct: 58 --------------GALWERLDAAADLVQMGRVPLILLMRDDSRGQYRFTARTSWSRTQW 103
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLY 191
+ L GV ++ I L + + ++ ++ Q K+++LVSSA H++R+ L
Sbjct: 104 AVDYLAWRGVPKERIVLLSPVEGALGTLAEARAVARHLSKQVKSLVLVSSAPHMRRTVLA 163
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
F+ + S Y+ L +F L EY+ +L+
Sbjct: 164 FRR------SLPSAVGVIPYAATSLENSFELYHPIWLEYLKLLVY 202
>gi|294789429|ref|ZP_06754666.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
gi|294482642|gb|EFG30332.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
Length = 224
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 33/226 (14%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
Q + K ++L S + Y + + +V+LG
Sbjct: 2 QKLIKRVLKLFGLMLLSGGLLVVFCAW------QVYDYAQHEKPLPQKADAVVVLGAAAW 55
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS RI ++LY+ +I +GG P+ E+ V
Sbjct: 56 GN--------NPSPVLRERINYGIKLYQQH----TVQKMIFTGGTPKFGYPTEAEVAQRY 103
Query: 138 LLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ V + DI L+T+S T++N + +++ N ++I+VS HL R+ + G
Sbjct: 104 AMQKFNVPQRDIILDTESSSTYENLTNTRTLMHNHHLDSVIIVSDPDHLARAAAMARALG 163
Query: 197 INTKASCSDYLNAYYSIIPLSANF----YLTELALKEYIGILIAYY 238
I S + P S + + L+E + + Y
Sbjct: 164 ITANVSAT----------PSSLYYGQRKARLKFMLQETLSLTYFYL 199
>gi|284007104|emb|CBA72379.1| transport protein [Arsenophonus nasoniae]
Length = 232
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 56/185 (30%), Gaps = 17/185 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + + +++ + + + + + ++ ++LG
Sbjct: 3 RKFLIYSLLTIIVTAIVAILTFDRWIS---WKTADYIYDDVKKLPPRSVGMILGTSKFYS 59
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P+ RI + Y S K ++ GD + E I L+
Sbjct: 60 ------TGSPNEYYKYRIQGAINAYNSGK-----IKYLLVSGDNAHYNYNEPITMRRDLI 108
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+G+ I L+ T + + + +++ +H +R+ GI+
Sbjct: 109 AAGIPAAKIVLDFAGFRTLDSVIRTRQVFATNNFT---IITQRFHCERALFIAMKKGIDA 165
Query: 200 KASCS 204
+
Sbjct: 166 QCYAV 170
>gi|226330831|ref|ZP_03806349.1| hypothetical protein PROPEN_04752 [Proteus penneri ATCC 35198]
gi|225201626|gb|EEG83980.1| hypothetical protein PROPEN_04752 [Proteus penneri ATCC 35198]
Length = 163
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 8/154 (5%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ +P +D + + G + + + RI + Y S K
Sbjct: 11 DRWIGWKTNPYIFEDVDTLPAKKVGMVLGTSKYYTSGYINQFYQYRIQGAVNAYNSGKIQ 70
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ + GD KH E L+++G+ I ++ T + + +
Sbjct: 71 YLLLS-----GDNAKHSYNEPNTMRKDLIKAGIPASRIVMDFAGFRTLDSVVRTKEVFGT 125
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+++ +H +R+ GI+ +
Sbjct: 126 DGFT---IITQRFHCERAVFIALEKGIDAQCFAV 156
>gi|332092637|gb|EGI97708.1| sanA [Shigella dysenteriae 155-74]
Length = 235
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 25 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGAINAYNSGKI 78
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 79 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFD 133
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 134 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLY 190
Query: 225 LALKE 229
+ +E
Sbjct: 191 IFKRE 195
>gi|323968068|gb|EGB63478.1| hypothetical protein ERJG_00588 [Escherichia coli M863]
gi|323977662|gb|EGB72748.1| hypothetical protein ERFG_01184 [Escherichia coli TW10509]
gi|327252382|gb|EGE64041.1| sanA [Escherichia coli STEC_7v]
Length = 239
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 51/185 (27%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGAINAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPKTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|74312667|ref|YP_311086.1| hypothetical protein SSON_2200 [Shigella sonnei Ss046]
gi|73856144|gb|AAZ88851.1| vancomycin sensitivity [Shigella sonnei Ss046]
gi|323168717|gb|EFZ54397.1| sanA [Shigella sonnei 53G]
Length = 239
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLS-----GDNALQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV+ DI L+ T + + + I+++ +H +R+ H
Sbjct: 103 RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALH 159
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + S + +E
Sbjct: 160 MGIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFRRE 199
>gi|311278872|ref|YP_003941103.1| hypothetical protein Entcl_1558 [Enterobacter cloacae SCF1]
gi|308748067|gb|ADO47819.1| protein of unknown function DUF218 [Enterobacter cloacae SCF1]
Length = 244
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFGARFGALADLY 194
Query: 225 LALKE 229
L +E
Sbjct: 195 LFKRE 199
>gi|300703293|ref|YP_003744895.1| hypothetical protein RCFBP_10965 [Ralstonia solanacearum CFBP2957]
gi|299070956|emb|CBJ42264.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum CFBP2957]
Length = 190
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 30/179 (16%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++IV+LG +S R+ LY + + +
Sbjct: 41 SMPGHADVIVVLGG-----------------ESGQRVIGAAELYHAGVASRVFVS----- 78
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++ +L+ +GV I E +S +T +NA+ + M+ ++ +LV+
Sbjct: 79 ------GEGDCLLIVRRLVMAGVPAGRIGHECESGNTMENARMTRRMLDGQPVRSAVLVT 132
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S YH R+ F+ A + + + S Y + L EY+ R
Sbjct: 133 SWYHTGRALHAFRRV-WPEVAWRARGVFPG-DTLAKSFPIYESGSILAEYLKRAWYAVR 189
>gi|194431510|ref|ZP_03063802.1| protein SanA [Shigella dysenteriae 1012]
gi|194420335|gb|EDX36412.1| protein SanA [Shigella dysenteriae 1012]
Length = 239
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKINYLLLS-----GDNALQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV+ DI L+ T + + + I+++ +H +R+ H
Sbjct: 103 RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALH 159
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + S + +E
Sbjct: 160 MGIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKRE 199
>gi|15838692|ref|NP_299380.1| hypothetical protein XF2101 [Xylella fastidiosa 9a5c]
gi|9107229|gb|AAF84900.1|AE004026_1 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 202
Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 56/168 (33%), Gaps = 12/168 (7%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++I++LG PS RI + LY+ ++ T G
Sbjct: 39 DQAASSDVIIVLGAAAYDAK--------PSPVFEERIRHGLYLYQHGYAPTLIFTGGFGG 90
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ AES V L V I +ET S T QN + +++ + I+VS
Sbjct: 91 SSAR---FAESQVARRYALRYDVPPRAILIETVSRTTRQNLIQARQLMRVYGLRRAIVVS 147
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
H+ R+ + I+ AS + + S+
Sbjct: 148 DPLHMARALRLCRELDIDALASATP-STRFRSLHTRWRFLLQEVYFFH 194
>gi|16761126|ref|NP_456743.1| hypothetical protein STY2414 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141178|ref|NP_804520.1| hypothetical protein t0671 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052359|ref|ZP_03345237.1| hypothetical protein Salmoneentericaenterica_05146 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213419691|ref|ZP_03352757.1| hypothetical protein Salmonentericaenterica_18613 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213428215|ref|ZP_03360965.1| hypothetical protein SentesTyphi_23210 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213646119|ref|ZP_03376172.1| hypothetical protein SentesTy_01466 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213854518|ref|ZP_03382758.1| hypothetical protein SentesT_10514 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289811814|ref|ZP_06542443.1| hypothetical protein Salmonellaentericaenterica_48927 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
gi|289824283|ref|ZP_06543878.1| hypothetical protein Salmonellentericaenterica_03714 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25306415|pir||AF0780 vancomycin resistance protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503424|emb|CAD02564.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136804|gb|AAO68369.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 239
Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
+ I+++ +H +R+ H GI + + +
Sbjct: 138 ---INDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|218554709|ref|YP_002387622.1| hypothetical protein ECIAI1_2221 [Escherichia coli IAI1]
gi|300819165|ref|ZP_07099367.1| protein SanA [Escherichia coli MS 107-1]
gi|218361477|emb|CAQ99066.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|300528318|gb|EFK49380.1| protein SanA [Escherichia coli MS 107-1]
gi|323184233|gb|EFZ69610.1| sanA [Escherichia coli 1357]
Length = 239
Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGAINAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPTDIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|325673388|ref|ZP_08153079.1| transporter [Rhodococcus equi ATCC 33707]
gi|325555409|gb|EGD25080.1| transporter [Rhodococcus equi ATCC 33707]
Length = 199
Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 13/161 (8%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+ L IV+LG +PA+ SR+ + +
Sbjct: 47 VSSLAQYTAAHTYLTTGDPASRYIVVLGARLNADGLLPAVLN-------SRLNTAAAIAR 99
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+ +I+SGG Q E+ L+ GV +I L+ S T NA+ ++
Sbjct: 100 LHPAN----KVIVSGGPTQPLPYTEAQAMLAGLVLRGVNPANIVLDNDSFSTVDNARNTT 155
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFG--INTKASCS 204
++ +LV+SA H+ R+ FQ +
Sbjct: 156 QILSAAGADGAVLVTSASHIDRALATFQSASGQFRYVPVAA 196
>gi|309785402|ref|ZP_07680033.1| sanA [Shigella dysenteriae 1617]
gi|308926522|gb|EFP71998.1| sanA [Shigella dysenteriae 1617]
Length = 147
Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 8/108 (7%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ RI LY + K ++ GD + E+ L+ GV I
Sbjct: 43 NRYFTRRIDTAAALYHAGKVKW-----LLVSGDNGRKNYDEASGMQQALIAKGVPAKVIF 97
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ T + + + ++S +H +R+ + +GI
Sbjct: 98 CDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGI 142
>gi|146312389|ref|YP_001177463.1| hypothetical protein Ent638_2747 [Enterobacter sp. 638]
gi|145319265|gb|ABP61412.1| protein of unknown function DUF218 [Enterobacter sp. 638]
Length = 239
Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 59/203 (29%), Gaps = 13/203 (6%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+F + + +L + +P D + G + +
Sbjct: 5 VFYSLSVLVGILLLAALGLDRWMSWKTAPYIFDDLQDLPYRQVGVVLGTAKYYRTGVINQ 64
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
RI + Y S K + + + GD + E + L+ +GV+ DI L+
Sbjct: 65 YYRYRIQGALNAYNSGKVNYLLLS-----GDNAQQSYNEPMTMRKDLIAAGVDPADIVLD 119
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
T + + + I+++ +H +R+ H GI +
Sbjct: 120 YAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDML 176
Query: 212 S-----IIPLSANFYLTELALKE 229
S L +E
Sbjct: 177 SVRVREFGARFGALADLYLFKRE 199
>gi|312139306|ref|YP_004006642.1| hypothetical protein REQ_18910 [Rhodococcus equi 103S]
gi|311888645|emb|CBH47957.1| putative secreted protein [Rhodococcus equi 103S]
Length = 206
Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 13/161 (8%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+ L IV+LG +PA+ SR+ + +
Sbjct: 54 VSSLAQYTAAHTYLTTGDPASRYIVVLGARLNADGLLPAVLN-------SRLNTAAAIAR 106
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+ +I+SGG Q E+ L+ GV +I L+ S T NA+ ++
Sbjct: 107 LHPAN----KVIVSGGPTQPLPYTEAQAMLAGLVLRGVNPANIVLDNDSFSTVDNARNTT 162
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFG--INTKASCS 204
++ +LV+SA H+ R+ FQ +
Sbjct: 163 QILSAAGADGAVLVTSASHIDRALATFQSASGQFRYVPVAA 203
>gi|320199739|gb|EFW74328.1| SanA protein [Escherichia coli EC4100B]
Length = 239
Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGAINAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPTDIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|254711639|ref|ZP_05173450.1| hypothetical protein BpinB_15584 [Brucella pinnipedialis B2/94]
gi|261319263|ref|ZP_05958460.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261298486|gb|EEY01983.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
Length = 205
Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 64/170 (37%), Gaps = 22/170 (12%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I P R + +L+K + + GD +
Sbjct: 26 LQDDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA---TGDGDCLLN--------K 74
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ GV I +E ++ T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 75 HIMMAKGVPPSAILVECRAGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 134
Query: 196 ----GINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +D + P+ E +KEY + G
Sbjct: 135 CPQMHFTSSPMADADMPGGFPGTPPV------IEHVVKEYAKLGWYLISG 178
>gi|329999121|ref|ZP_08303325.1| protein SanA [Klebsiella sp. MS 92-3]
gi|328538451|gb|EGF64569.1| protein SanA [Klebsiella sp. MS 92-3]
Length = 232
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 48/160 (30%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYRYRIQGALNAYNSGKVNYLLLS-----GDNALQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L++ GV+ DI L+ T + + + I+++ +H +R+ H
Sbjct: 103 RRDLIKGGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALH 159
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + +S + +E
Sbjct: 160 MGIQAQCYAVPSPKDMWSVRLREFGARFGALADLYIFKRE 199
>gi|237732197|ref|ZP_04562678.1| vancomycin sensitivity protein [Citrobacter sp. 30_2]
gi|226907736|gb|EEH93654.1| vancomycin sensitivity protein [Citrobacter sp. 30_2]
Length = 239
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD + E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNAQQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTE 224
I+++ +H +R+ H GI +
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLTVRVREFGARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|188533436|ref|YP_001907233.1| hypothetical protein ETA_12940 [Erwinia tasmaniensis Et1/99]
gi|188028478|emb|CAO96340.1| Vancomycin resistance protein [Erwinia tasmaniensis Et1/99]
Length = 236
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 20/160 (12%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + R+ + Y S K + + + GD + E +
Sbjct: 47 GVVLGTAKFYRTGVINQYYLYRMQGALNAYNSGKVNYLLLS-----GDNAQQSYNEPMTM 101
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GVE DI L+ T + + + I+++ +H +R+ L H
Sbjct: 102 RRDLIAAGVEPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALLIALH 158
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
GI + P N L+E L
Sbjct: 159 MGIQAQCYAV----------PSPKNMMSVR--LREVAARL 186
>gi|183602024|ref|ZP_02963393.1| hypothetical protein BIFLAC_07096 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219682933|ref|YP_002469316.1| hypothetical protein BLA_0439 [Bifidobacterium animalis subsp.
lactis AD011]
gi|241190510|ref|YP_002967904.1| hypothetical protein Balac_0463 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241195916|ref|YP_002969471.1| hypothetical protein Balat_0463 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183218909|gb|EDT89551.1| hypothetical protein BIFLAC_07096 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219620583|gb|ACL28740.1| putative membrane protein [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248902|gb|ACS45842.1| hypothetical protein Balac_0463 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250470|gb|ACS47409.1| hypothetical protein Balat_0463 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289178239|gb|ADC85485.1| Transporter [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793497|gb|ADG33032.1| hypothetical protein BalV_0444 [Bifidobacterium animalis subsp.
lactis V9]
Length = 355
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 24/166 (14%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG+G P ++ RI + + + + +I+SGG +
Sbjct: 180 ILVLGSGLFGETVPPLLQ--------KRIAKGIEIQRQDPH----ARLILSGGQGAGEDV 227
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E + L G + + E +S +T +N FS ++ + +VS+ YH+ R+
Sbjct: 228 PEGVAMKAWALAHGADPANTVCEERSRNTRENLLFSRNLFAD-PNGKTAIVSTGYHVFRA 286
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
L + +N S + ++ L+E+I +
Sbjct: 287 LLLSKQLHMNAVGYGS--KTPW---------YFSLNALLREFIAYV 321
>gi|58039794|ref|YP_191758.1| hypothetical protein GOX1350 [Gluconobacter oxydans 621H]
gi|58002208|gb|AAW61102.1| Hypothetical protein GOX1350 [Gluconobacter oxydans 621H]
Length = 194
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 58/164 (35%), Gaps = 17/164 (10%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + V+LG T EP R+ E +RL+++ ++
Sbjct: 30 WVAFRGVSAVPVRSEMAVILGTAVTQN-------GEPRPALRERLEEGLRLWRAGFVRTI 82
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ I G+ Q + + + L+ V I +++ +T+ A + +
Sbjct: 83 MVSGAIESGNHQDE----ARIMADWLMARNVPASAIIVDSHGNNTWLTALHVARLHPE-- 136
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTK--ASCSDYLNAYYSII 214
++V+ +H+ RS+ + G+ A+ + +
Sbjct: 137 --GAVVVTQWFHVLRSEWSLRRAGVKPVSGAAPCRFRMVELWYL 178
>gi|187929799|ref|YP_001900286.1| hypothetical protein Rpic_2729 [Ralstonia pickettii 12J]
gi|187726689|gb|ACD27854.1| protein of unknown function DUF218 [Ralstonia pickettii 12J]
Length = 192
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 30/179 (16%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++IV+LG +S R+ LY + + +
Sbjct: 41 PRLAQADVIVVLGG-----------------ESGQRVIGAAELYHAGVAPRVFVS----- 78
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++ +L+ +GV + I E S T +NA+ + + Q ++ ILV+
Sbjct: 79 ------GQGDCLLIERRLVMAGVPAERIGHECVSGSTMENARMTRGTLAGQQVQSAILVT 132
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S YH R+ F+ + + + S Y L EY+ R
Sbjct: 133 SWYHTGRALAVFRKV-WPEVTWGAQGVFPG-DTLAKSVPIYEAGSILAEYVKRAWYAVR 189
>gi|227431449|ref|ZP_03913498.1| integral membrane protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352815|gb|EEJ42992.1| integral membrane protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 335
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 79/206 (38%), Gaps = 29/206 (14%)
Query: 1 MLLSWIFLIVSYWHL---LCQSIRKIFFMSCFMLLFSFIGWG-IIPTILLKHLQFSYQRP 56
+LL + + W L S++ I + ++ L+ F + I + +L L
Sbjct: 105 VLLVYAIADIGIWLLNDGFSISLKPILVVIPWLSLYVFWQFLQFISSSILYGL------- 157
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ IV+LG G + I +RI ++ + TI
Sbjct: 158 ---VVKRPIHGPIVVLGGGLVDGQYVGRI-------VGNRIQAAVKDATKMSES---PTI 204
Query: 117 IISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I SGG + ++E+ N ++ V + LE S +T++N + S+ + +
Sbjct: 205 IFSGGQGKDELVSEAEAMRNFAVKRLNVPCEKTILEEHSSNTYENLRNSAKLTN----SS 260
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKA 201
+S YH+ R L + G+N +
Sbjct: 261 FTFYTSEYHVFRGVLLAKKQGVNAQG 286
>gi|30063588|ref|NP_837759.1| hypothetical protein S2358 [Shigella flexneri 2a str. 2457T]
gi|30041841|gb|AAP17568.1| vancomycin resistance protein [Shigella flexneri 2a str. 2457T]
gi|313651250|gb|EFS15648.1| sanA [Shigella flexneri 2a str. 2457T]
Length = 239
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGAINAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGTLADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|17547179|ref|NP_520581.1| transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17429481|emb|CAD16167.1| putative transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 185
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 31/178 (17%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++IV+LG +S R+ LY + + +
Sbjct: 37 PGRADVIVVLGG-----------------ESGQRVIGAAELYHAGVAPRVFVS------- 72
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVSS 181
G + ++ +L +GV + I E +S T +NA+ + + ++ +LV+S
Sbjct: 73 ----GEGDCLLIVRRLEMAGVPAERIGHECESGSTMENARMTRRTLAGQPPVRSAVLVTS 128
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH R+ F+ A + + + S Y + L EYI R
Sbjct: 129 WYHTGRALHVFRRV-WPEVAWGARGVFPG-DTLAKSFPIYESGSILAEYIKRAWYAVR 184
>gi|34499583|ref|NP_903798.1| hypothetical protein CV_4128 [Chromobacterium violaceum ATCC 12472]
gi|34105434|gb|AAQ61789.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 190
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 69/192 (35%), Gaps = 30/192 (15%)
Query: 48 HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC 107
L + L++ + + IV+LG +S R+ LY
Sbjct: 24 PLIRYSKSWLVAETPQPRADWIVVLGG-----------------ESGERVIGAAELYHQG 66
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+ + + G + ++ +L +GV R I E S T+QNA +
Sbjct: 67 RAPFVFVS-----------GEGDCLLIVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQA 115
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ + Q + I LV+S +H +R+ F+ + + S +Y L
Sbjct: 116 LASRQPRRITLVTSWFHSRRALETFRQA-WPEVEWGMHIVYPGNDLY-HSLAWYEAGAVL 173
Query: 228 KEYIGILIAYYR 239
EY+ IL+ R
Sbjct: 174 TEYLKILVYSVR 185
>gi|238895711|ref|YP_002920446.1| hypothetical protein KP1_3812 [Klebsiella pneumoniae NTUH-K2044]
gi|238548028|dbj|BAH64379.1| vancomycin resistance protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 238
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L++ GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRRDLIKGGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + +S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYVVPSPKDMWSVRLREFGARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|303235087|ref|ZP_07321710.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
gi|302493791|gb|EFL53574.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
Length = 308
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
+ + ++L HL + D + IV+LG IE S
Sbjct: 108 YIIGMNLYLSLMVLSHLLGNLIIKYQKFDT--DFDYIVVLGGSMKG--------IELSEL 157
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ + Y + K +I+I G + ES+ N +E+ ++ DI LE
Sbjct: 158 IKQRMLTSFAYYTTNK------SIMIFSGGKSNGDIEESVAMKNFAIENHIQDTDILLEK 211
Query: 153 QSLDTFQNAQFSSSMIKNMQ----GKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDY 206
+++T QN ++ +I+ K I ++++ +H R++L + S++
Sbjct: 212 LAMNTMQNIEYVKKLIQQQDTDFVDKKICVITNNFHAFRTKLICNKMKVNWTVIPTQSNF 271
Query: 207 LNAYYSII 214
+ + +
Sbjct: 272 NSKISTYL 279
>gi|258544135|ref|ZP_05704369.1| conserved membrane protein SanA [Cardiobacterium hominis ATCC
15826]
gi|258520643|gb|EEV89502.1| conserved membrane protein SanA [Cardiobacterium hominis ATCC
15826]
Length = 211
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 50/162 (30%), Gaps = 15/162 (9%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
S Q + ++LG + +RI
Sbjct: 16 PAGCYFWISWSSR-AYLYDSVQEIPARQVALVLGTAKYTTDGRVNLYYR------ARIDA 68
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
LY+ K I GD + E L+ +G+ D I+ + L T
Sbjct: 69 AAALYRGGKAQ-----FFIVSGDNRSLSYNEPAQMRADLIAAGIPADHIQPDYAGLRTLD 123
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ + + + ++ I+VS A+H R+ +H G A
Sbjct: 124 SVLRADKVFR---LQDYIIVSQAFHNARAVFLARHHGQAVVA 162
>gi|146329558|ref|YP_001208972.1| hypothetical protein DNO_0035 [Dichelobacter nodosus VCS1703A]
gi|146233028|gb|ABQ14006.1| conserved hypothetical membrane protein [Dichelobacter nodosus
VCS1703A]
Length = 223
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 54/201 (26%), Gaps = 24/201 (11%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
I+ L I ++LG + + +RI
Sbjct: 25 MTILGVYLWIEHTSR-PYLYDDINRVPSCEIALVLGTAKYLTDGRH------NAFYDARI 77
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+LY + K I G E LL +G+ I+ + T
Sbjct: 78 EAAAQLYHAGKA-----RYFIVSGANPSRYYNEPEQMRLDLLAAGIPPAHIQADYAGFRT 132
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+ + +N + ++S +H R+ + + A + A+
Sbjct: 133 LDSILRMKKVFQNQRYL---IISQPFHNARAVFIARWHHHDAIAFNARDPVAFQ------ 183
Query: 218 ANFYLTELALKEYIGILIAYY 238
+ ++E + A
Sbjct: 184 ---NSMKTRIRELFARIKAVL 201
>gi|307544379|ref|YP_003896858.1| hypothetical protein HELO_1789 [Halomonas elongata DSM 2581]
gi|307216403|emb|CBV41673.1| hypothetical protein HELO_1789 [Halomonas elongata DSM 2581]
Length = 253
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/161 (11%), Positives = 45/161 (27%), Gaps = 18/161 (11%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + R+ L + + + GD E +
Sbjct: 55 GIVFGTSHWTRSGARNPHFEGRMRAAASLIHDGRVMHLLLS-----GDNSTRYYNEPVTM 109
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L V + L+ TF + + + +LV+ ++HL R+
Sbjct: 110 WKDLRGRAVPDSAMTLDYAGFSTFDTLARARDVFAVKR---ALLVTQSWHLPRALFIADA 166
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
GI + + + ++ + +E++
Sbjct: 167 LGIEARGCAAPERPSDSTLRLRA----------REWVARAA 197
>gi|317055190|ref|YP_004103657.1| hypothetical protein Rumal_0470 [Ruminococcus albus 7]
gi|315447459|gb|ADU21023.1| protein of unknown function DUF218 [Ruminococcus albus 7]
Length = 198
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 16/154 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLY K + + D +AE L G+ DI E S
Sbjct: 46 RVPEAVRLYNEGKAPLILLSGGQVQ-DTSLGNMAEWESMKKAALALGISESDILAEKLSK 104
Query: 156 DTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYY 211
+T +N +S ++ G IILV++AYH++R+ F G + +A
Sbjct: 105 NTAENFMYSDELLIGYLPLGSKIILVTTAYHMRRALCMAHKFMPGYDFIPCPVQKGSA-- 162
Query: 212 SIIPLSANFYLTEL----ALKEYIGILIAYYRGN 241
N+Y T+ AL E+ L Y +
Sbjct: 163 ----TKENWYKTDKGRQTALDEWRK-LSYYIKDG 191
>gi|261323939|ref|ZP_05963136.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261299919|gb|EEY03416.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 250
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 75/233 (32%), Gaps = 36/233 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ + I + +L +FI + + L+ + + +P P + IV+
Sbjct: 34 FAWSVMMRILRRLQPVSIILFLAFIAF--LGGFLVFSEKVTGMQP---PVLSEPAEAIVV 88
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
L G SR+ + L K + + + + + L +
Sbjct: 89 LTGG------------------QSRVKAGINLLKEKRGKRLLISGVHP--STNEEALQRA 128
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 129 THADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILE 183
Query: 192 F--QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + S + + EY+ L A R
Sbjct: 184 MSSRMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYLGAVVRLG 233
>gi|257482213|ref|ZP_05636254.1| hypothetical protein PsyrptA_03027 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 115
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 2/101 (1%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
+ + IV+LGNG P+ R+ R
Sbjct: 76 LAQQADAIVVLGNGRERNSPTW-GTDTPTGLGLERLRLAAR 115
>gi|295703757|ref|YP_003596832.1| hypothetical protein BMD_1626 [Bacillus megaterium DSM 319]
gi|294801416|gb|ADF38482.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 198
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 57/228 (25%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ IF + ++ F F G + L+ + ++I++L
Sbjct: 7 KRIKISIFMLGLGIIFFLFAG-----------------KELVVNEKPVKSDVIIVLSG-- 47
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
R+ + + LYK +I+S G + +
Sbjct: 48 ----------------DNDRLEKGIELYKKGYASH----LILSNGQENN--------FYH 79
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ ESG+ D I LE + T +NA+F+ ++ N ++ I+VSS YH+KR + F
Sbjct: 80 QAKESGIPEDSIILENHATSTTENAKFTKRLMMNYHFQSAIVVSSNYHMKRVEKNFNKEF 139
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALK------EYIGILIAYY 238
+T+ + + P E AL EY+ ++ Y+
Sbjct: 140 KDTQIQLTYCSSGSRYYNPQ----RWWETALNRKVTYTEYVKLIGNYF 183
>gi|283785953|ref|YP_003365818.1| hypothetical protein ROD_22721 [Citrobacter rodentium ICC168]
gi|282949407|emb|CBG89020.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 239
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRAGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNAMQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFGARFGALADLY 194
Query: 225 LALKE 229
L +E
Sbjct: 195 LFKRE 199
>gi|317485960|ref|ZP_07944815.1| DUF218 domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316922733|gb|EFV43964.1| DUF218 domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 185
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 33/209 (15%)
Query: 32 LFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+ IG I +L+ L + + L + ++IV+LG
Sbjct: 5 WYGAIGKLAIAALLIGAVLIWRAEAWLHVDVPLEHADVIVVLGG---------------- 48
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+S R+ LY + G + + D
Sbjct: 49 -ESGQRVIGAAELYHQGVAPK-----VFVTGSGDGGLIVRRLGMAGV--------PDAAC 94
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E+QS T++NA + ++ ++++LV+S +H +R+ F+ + A
Sbjct: 95 ESQSRSTYENAVLTKKALEASHPRSVMLVTSWFHSRRALAVFRDV-WPEVTFGVHPVYAG 153
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYR 239
+ Y EY+ L R
Sbjct: 154 ATFTARFR-IYEMGYIFSEYVKTLWYMVR 181
>gi|296103792|ref|YP_003613938.1| hypothetical protein ECL_03455 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295058251|gb|ADF62989.1| hypothetical protein ECL_03455 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 239
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIFDDLQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPVTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRVREFGARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|283832427|ref|ZP_06352168.1| protein SanA [Citrobacter youngae ATCC 29220]
gi|291072081|gb|EFE10190.1| protein SanA [Citrobacter youngae ATCC 29220]
Length = 239
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD + E + L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNAQQNYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTE 224
I+++ +H +R+ H GI +
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLTVRVREFGARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|89054691|ref|YP_510142.1| hypothetical protein Jann_2200 [Jannaschia sp. CCS1]
gi|88864240|gb|ABD55117.1| protein of unknown function DUF218 [Jannaschia sp. CCS1]
Length = 252
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 64/212 (30%), Gaps = 15/212 (7%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I + F+ G IL L P + + I+ LG G +
Sbjct: 27 IRGLGRFVGRVILAGIAAYALIL-SGLAVYIAAAPGEPPVPEAHDAIICLGAGLSPT--- 82
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
S +R LY + ++ G S L++ G
Sbjct: 83 -QGPDHAGPASRARAVTCAGLYGAAVAP---LVVVTGEGIA---DYPVSTAMARVLMDHG 135
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG-INTKA 201
V I E + T QNA FS ++ + ++LV+ +HL R+ F+ F
Sbjct: 136 VPEHAIVNEPAAGSTIQNAAFSVPLL-PTETTRVVLVTQRFHLPRAIATFRIFTPWEVTG 194
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ + + T L+E
Sbjct: 195 YEA--PLPGQDAVAVHERRTPTRWLLREVAAY 224
>gi|49474722|ref|YP_032764.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
gi|49240226|emb|CAF26695.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
Length = 230
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 36/192 (18%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + + ++ F G+ I L P + I++L G
Sbjct: 40 LFRHLPPTALFLLMIVFFFCAGFVIFSEK---------TEQLKPPNPLPKADAIIVLTGG 90
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
RI + L + + + + + + ++ S
Sbjct: 91 EK------------------RIETGLNLLQQELGSRLLISGVNTTTNLKR--FMYSTHIT 130
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+L V+ ++++T NA+ S+ IK + + +V+ YH+ RS ++
Sbjct: 131 PQLFTCCVDI-----GHKAINTKGNAEESADWIKKHHYQTVYIVTHDYHMWRSLRELKYL 185
Query: 196 --GINTKASCSD 205
IN A
Sbjct: 186 MPDINFIAYPVK 197
>gi|92113364|ref|YP_573292.1| hypothetical protein Csal_1238 [Chromohalobacter salexigens DSM
3043]
gi|91796454|gb|ABE58593.1| protein of unknown function DUF218 [Chromohalobacter salexigens DSM
3043]
Length = 237
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 18/162 (11%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + +R+ +L + + + GD + E I
Sbjct: 60 GLVFGTAEGLRGGGHNPYFTARMEAAAQLLRLGHVRHLLLS-----GDNRTRYYNEPIAM 114
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L V DD+ L+ TF + + + ++++LVS A+HL R+
Sbjct: 115 WRALRARNVASDDMTLDYAGFSTFDSVVRARRIFG---VEHVLLVSQAWHLPRALFIADA 171
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
G+ + P +L L+E++ A
Sbjct: 172 AGLKAQGCAV----------PGGKVSGEWQLWLREWLARAAA 203
>gi|262201027|ref|YP_003272235.1| hypothetical protein Gbro_1032 [Gordonia bronchialis DSM 43247]
gi|262084374|gb|ACY20342.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 228
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG PAI R+ RL K + M ++SGG+
Sbjct: 97 YIVVLGAKMGTFGQTPAILDR-------RLNVAARLAKQHPFNRM----VVSGGNTWWLP 145
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++E+ N LL G+ + E +S T QNA ++ M+K M ++V++ +H+ R
Sbjct: 146 VSEAQFMNLGLLRRGIPMWQMVNEGRSTSTVQNATYTVGMLKAMGANGAVIVTNGFHMGR 205
Query: 188 SQLYFQHF 195
+ F+
Sbjct: 206 ALNDFRAA 213
>gi|238788869|ref|ZP_04632660.1| hypothetical protein yfred0001_11890 [Yersinia frederiksenii ATCC
33641]
gi|238723174|gb|EEQ14823.1| hypothetical protein yfred0001_11890 [Yersinia frederiksenii ATCC
33641]
Length = 245
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 58/213 (27%), Gaps = 27/213 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ +++ + I + Q + V+LG
Sbjct: 2 WKRLIISLIIIAGLLMVTAIALDRWIS-WKTAPFIYDELQGLPHRQVGVVLGTAKYYRTG 60
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ RI + Y S K + + GD E + L+ +
Sbjct: 61 GINQFYQY------RIQGAINAYNSGKVSYLLLS-----GDNALQSYNEPMTMRRDLIAA 109
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV DI L+ T + + + I+++ +H +R+ H GI +
Sbjct: 110 GVAPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALHMGIQAQC 166
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + ++E L
Sbjct: 167 FAVPSPK------------DMLNVRVREIFARL 187
>gi|326802974|ref|YP_004320792.1| hypothetical protein HMPREF9243_0445 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651445|gb|AEA01628.1| putative membrane protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 345
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 84/246 (34%), Gaps = 41/246 (16%)
Query: 3 LSWIFLIVSYWHLLCQS-------IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
L+ ++V H + + + + + + + L L
Sbjct: 103 LAVFLILVGLVHYYVRFNPELMADKHWLHILDFVVAYYVLLLINFLVNSLRLWL------ 156
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ + + I++LG T+ + R+ + K H
Sbjct: 157 ----IEDDRKQDYIIILGCLFNSDNTVSQMLKL-------RLDACLAYVGRQKFLYHHIP 205
Query: 116 IIISGGD--PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I+I G + +E+ V L G+ + I E Q+ +T N +S +I+ +Q
Sbjct: 206 ILIVSGAATVENSECSEADVMAQYLKSQGIPEEKIWREDQATNTHGNFAYSKQLIERIQP 265
Query: 174 K---NIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+I ++SA+HL RSQLY G+ + + + ++E
Sbjct: 266 VKSAHIAFITSAFHLYRSQLYANLEGLYQVTGFGA-----------KTTLRESVKHGIRE 314
Query: 230 YIGILI 235
++ IL
Sbjct: 315 FVAILF 320
>gi|116496133|ref|YP_807867.1| hypothetical protein LSEI_2710 [Lactobacillus casei ATCC 334]
gi|116106283|gb|ABJ71425.1| hypothetical protein LSEI_2710 [Lactobacillus casei ATCC 334]
Length = 360
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + V+LG P +++P+ + R+ ++ K + I+ G
Sbjct: 180 PKDSHHYFVVLGYAL-----SPNGKMQPTMK--KRLEIALKAAKKYPKSK-----ILVAG 227
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ L E+ V L+ G+ + I+LE S +T +NA FS + + + L++S
Sbjct: 228 GVPENKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVENALFSVRELVDRGATSATLITS 287
Query: 182 AYHLKRSQLYFQHFG 196
A H++R+ L ++ G
Sbjct: 288 ATHMRRAFLLYRMAG 302
>gi|147677433|ref|YP_001211648.1| hypothetical protein PTH_1098 [Pelotomaculum thermopropionicum SI]
gi|146273530|dbj|BAF59279.1| uncharacterized conserved protein [Pelotomaculum thermopropionicum
SI]
Length = 148
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R LY+ + + S A +GV DI +E +S
Sbjct: 10 ERELYAAELYRRGLAPRIIMSGCGSAAKQMAMKAAA----------AGVGEQDIIVENKS 59
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYS 212
T+QNA ++ ++ + K+ I+V+S YH++R++L F+ K N+ ++
Sbjct: 60 GSTYQNALYTKDIVLSRGFKSAIVVTSPYHMRRARLVFERVFRNTGVKLFYCAAKNSGFN 119
Query: 213 IIPLSANFYLTELALKEYIGILIAYYR 239
++ ++ L+E+I ++ ++R
Sbjct: 120 ADGRCSSKADRQITLREWIKLVYYWFR 146
>gi|145642253|ref|ZP_01797819.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae R3021]
gi|145273058|gb|EDK12938.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae
22.4-21]
Length = 199
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 52/182 (28%), Gaps = 26/182 (14%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
+ ++ ++LG P + + SR+ L + K + +
Sbjct: 19 KIFINIDELPFRPYALVLGTSKYTASGKPNVYYD------SRLMAAKSLIEQQKVNYLLL 72
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ GD + E L + GV + + T + + + +
Sbjct: 73 S-----GDNRTLQYNEPRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQVQAFT 127
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+VS +H +R+ L Q I+ + ++E +
Sbjct: 128 ---IVSQKFHCERALLIAQAHNIDAICFVAKQPE------------LHFSTQIREVFARI 172
Query: 235 IA 236
A
Sbjct: 173 KA 174
>gi|229916781|ref|YP_002885427.1| hypothetical protein EAT1b_1054 [Exiguobacterium sp. AT1b]
gi|229468210|gb|ACQ69982.1| protein of unknown function DUF218 [Exiguobacterium sp. AT1b]
Length = 166
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 24/168 (14%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS RI K+ +I +GG G
Sbjct: 11 FVIILGAKVNG--------TRPSRALRHRIDVAAAYAKAHPHVE----LIATGGQGPDEG 58
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+AE+ V +L+ G++ I +E S T +N + S G +V++ +H+ R
Sbjct: 59 MAEARVIERELMAQGIDATRIHVEATSTSTIENFEHSRLFWDGASGV--TIVTNDFHVPR 116
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++L + + + ++ + ++E + +
Sbjct: 117 ARLIARLY----------FQLKSDALYAPTPPLAKGRYLIREVLAYVK 154
>gi|260598609|ref|YP_003211180.1| vancomycin high temperature exclusion protein [Cronobacter
turicensis z3032]
gi|260217786|emb|CBA32240.1| Protein sanA [Cronobacter turicensis z3032]
Length = 216
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 48/160 (30%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD + E +
Sbjct: 27 GVVLGTAKYYRTGVINQYYRYRIQGALNAYNSGKVNYLLLS-----GDNAQQSYNEPMTM 81
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV+ DI L+ T + + + I+++ +H +R+ H
Sbjct: 82 RKDLIAAGVDPADIVLDYAGFRTLDSIVRTRRVFDTNDF---IIITQRFHCERALFIALH 138
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + S + +E
Sbjct: 139 MGIQAQCYAVPSPKNMLSVRVREFGARLGALADLYIFKRE 178
>gi|159044137|ref|YP_001532931.1| hypothetical protein Dshi_1588 [Dinoroseobacter shibae DFL 12]
gi|157911897|gb|ABV93330.1| hypothetical protein Dshi_1588 [Dinoroseobacter shibae DFL 12]
Length = 213
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 69/177 (38%), Gaps = 20/177 (11%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ + C + + +G+ + + + P + + IV+L +G
Sbjct: 5 RALWQLCKIGVLVLMGFAVATFAGIVLYE---------PPARSEYAAIVVLSHGVAAD-- 53
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
S Q+ +R + +++ +I SGG ++ + + +
Sbjct: 54 -----GTLSPQTAARTQAGLDAFEAG----YAPKVIFSGGLGGLEPASKGALMAEAAIAA 104
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
G+ + +E +S T QNA F++ ++ ++ + ++LV+ YH RS F G
Sbjct: 105 GLPAEVAMVEGESHSTLQNALFTARLVPELRDQPVLLVTHRYHGMRSIASFWWAGFR 161
>gi|116619012|ref|YP_819383.1| hypothetical protein LEUM_1939 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097859|gb|ABJ63010.1| hypothetical protein LEUM_1939 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 335
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 79/206 (38%), Gaps = 29/206 (14%)
Query: 1 MLLSWIFLIVSYWHL---LCQSIRKIFFMSCFMLLFSFIGWG-IIPTILLKHLQFSYQRP 56
+LL + + W L S++ I + ++ L+ + I + +L L
Sbjct: 105 VLLVYAIADIGIWLLNDGFSISLKPILVVIPWLSLYVLWQFLQFISSSILYGL------- 157
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ IV+LG G + I +RI ++ ++ TI
Sbjct: 158 ---VVKRPIHGPIVVLGGGLVDGQYVGRI-------VGNRIQAAVKDATKMSEY---PTI 204
Query: 117 IISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I SGG + ++E+ + ++ V + LE S +T++N + S+ + +
Sbjct: 205 IFSGGQGKDELVSEAEAMRDFAVKRLNVPCEKTILEEHSRNTYENLRNSAKLTN----SS 260
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKA 201
+S YH+ R L + G+N +
Sbjct: 261 FTFYTSEYHVFRGVLLAKKQGVNAQG 286
>gi|255323880|ref|ZP_05365006.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|255299060|gb|EET78351.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
Length = 151
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 35/161 (21%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
P SR+ + + LY + II+S G E+ L+E GV +
Sbjct: 19 GYPGAMLRSRLDKALALYSGQQ-------IIVS-------GRGEAGPMATYLIERGVPAE 64
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ +E ++ T +N + + + + +V++ +H+ R+ L+ H GI + +
Sbjct: 65 RVVVEPEATSTNENLENAHRL---APDAVLQVVTNDFHVLRTALWAWHLGIAVRLHPA-- 119
Query: 207 LNAYYSIIPLSANFYLTELALKEYIG-------ILIAYYRG 240
+ ++P + L+E + I+ RG
Sbjct: 120 -RTPWRLMPRNY--------LREVLATPHSAARIVWRRMRG 151
>gi|83593886|ref|YP_427638.1| hypothetical protein Rru_A2551 [Rhodospirillum rubrum ATCC 11170]
gi|83576800|gb|ABC23351.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 206
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 23/183 (12%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
R +G +V+LG PS R+ + L + +
Sbjct: 17 RAFPPAGRAGEGCAVVVLGA-------RVLGDGRPSPALERRVLHGVALARRHPAARLLL 69
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ +GG L E+ V L +G+ + + LE ++LDT NA+ S +++ +
Sbjct: 70 SGGATGG-----PLDEAWVMATLALGAGIAAERLILEDRALDTLGNARHSLPLLRAARIG 124
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL----KEY 230
++LV+ H+ R+ L F+ A D+L + P A + A+ +E
Sbjct: 125 RVLLVTDPSHMPRALLSFR-------AVAGDHLRLRAAPTPCPAGGWRNRRAIFGVLREM 177
Query: 231 IGI 233
+
Sbjct: 178 AAL 180
>gi|187732733|ref|YP_001879527.1| hypothetical protein SbBS512_E0827 [Shigella boydii CDC 3083-94]
gi|187429725|gb|ACD08999.1| protein SanA [Shigella boydii CDC 3083-94]
Length = 239
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 46/160 (28%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLS-----GDNALQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV DI L+ T + + + I+++ +H +R+ H
Sbjct: 103 RKDLIAAGVAPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALH 159
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + S + +E
Sbjct: 160 MGIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKRE 199
>gi|163793809|ref|ZP_02187783.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
gi|159180920|gb|EDP65437.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
Length = 231
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 69/216 (31%), Gaps = 30/216 (13%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+ L + + T L R P + +V+L G+
Sbjct: 18 GIGLLITVVVLSLATAWTIGLVRYASRIPTQPTLVEPAAAVVVLTGGSK----------- 66
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
R+ + L + + + DP + ++ L ++ ++ +
Sbjct: 67 -------RMDAGVALLAKGTAPVLFVSGVDHRVDPARIRDLIPDAGDS-LDQATIDCCVV 118
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCS-- 204
S DT NA+ ++ + + ++ILV+S YH+ R++L F H +
Sbjct: 119 LGYGAS-DTLGNARETALWARATERTSLILVTSNYHMPRARLEFTHALPEVRLVPYPVIP 177
Query: 205 -DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
D + P + E+ + A R
Sbjct: 178 PDVRMDAWWRWPGTLGLVAG-----EWTKYVFARVR 208
>gi|46206241|ref|ZP_00047534.2| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 178
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 18/155 (11%)
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
RI + + L + + + + + + + + V+ D
Sbjct: 2 TGGAQRIGDAIDLLAGGRGKRLLISGV--NERTTREEIIRLNPAQEQWISCCVDLD---- 55
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCS--- 204
++ +T NA + ++ + + +V+S+YH+ R+ + +H G
Sbjct: 56 -YRARNTIGNAIETRRWMRRHRFGTVAVVTSSYHMPRTLVELRHALNAGETVIPYPVVTE 114
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ P + EY+ L+A+ R
Sbjct: 115 GLEIERWWADPAATRLLGA-----EYLKFLVAWLR 144
>gi|84683831|ref|ZP_01011734.1| hypothetical protein 1099457000264_RB2654_20698 [Maritimibacter
alkaliphilus HTCC2654]
gi|84668574|gb|EAQ15041.1| hypothetical protein RB2654_20698 [Rhodobacterales bacterium
HTCC2654]
Length = 154
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 57/156 (36%), Gaps = 15/156 (9%)
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
S R RL + II G AE+ V L + V
Sbjct: 6 WPGGVASPALRRRTERAGRLLLDGQVQQ-----IIVTGGVGDIPPAEADVAAGILADMEV 60
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
D + +T+S TF+N + M+ G+ +++VS A+HL RS L + G+
Sbjct: 61 PADLVLRDTRSTTTFENLVEARRML--QAGETVVVVSDAFHLPRSVLTARRLGLAASGES 118
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + + + AL+E ++ R
Sbjct: 119 TS--------LSGANPWRIIRAALREVPALIWYGIR 146
>gi|261340583|ref|ZP_05968441.1| protein SanA [Enterobacter cancerogenus ATCC 35316]
gi|288316993|gb|EFC55931.1| protein SanA [Enterobacter cancerogenus ATCC 35316]
Length = 237
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIFDDLQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD + E + L+ GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNAQQSYNEPVTMRKDLIAGGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTE 224
I+++ +H +R+ H GI + S
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRVREFGARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|298293358|ref|YP_003695297.1| hypothetical protein Snov_3404 [Starkeya novella DSM 506]
gi|296929869|gb|ADH90678.1| protein of unknown function DUF218 [Starkeya novella DSM 506]
Length = 228
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 58/180 (32%), Gaps = 30/180 (16%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + + IV+L G RI + L + + T +
Sbjct: 56 QTARRADGIVVLTGG------------------AERITDATNLLVEGRGTRLLITGV--- 94
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ + ++L +L+T NA ++ + + +++++V+
Sbjct: 95 ----HPDTTLAEIGRTVPATRESLECCVELGRAALNTRGNAIETAQWAREHRFRSLLVVT 150
Query: 181 SAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SA+H+ R+ + + + + A+ L EY+ + A+
Sbjct: 151 SAWHMPRALVELRRALPDVELVPYPVVPKRGPENW---EASLANVRLLFVEYVKFIGAWL 207
>gi|157144916|ref|YP_001452235.1| hypothetical protein CKO_00645 [Citrobacter koseri ATCC BAA-895]
gi|157082121|gb|ABV11799.1| hypothetical protein CKO_00645 [Citrobacter koseri ATCC BAA-895]
Length = 239
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 50/185 (27%), Gaps = 19/185 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYNEPMTMRKDLIAGGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTE 224
I+++ +H +R+ H GI +
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLTVRVREFGARFGALADLY 194
Query: 225 LALKE 229
+ +E
Sbjct: 195 IFKRE 199
>gi|327386938|gb|AEA58412.1| hypothetical protein LCBD_2918 [Lactobacillus casei BD-II]
Length = 360
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + V+LG P +++P+ + R+ ++ K + I+ G
Sbjct: 180 PKDSHHYFVVLGYAL-----SPNGKMQPTMK--KRLEIALKAAKKYPKSK-----ILVAG 227
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ L E+ V L+ G+ + I+LE S +T +NA FS + N + + L++S
Sbjct: 228 GVPENKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVENALFSVRELVNREATSATLITS 287
Query: 182 AYHLKRSQLYFQHFG 196
A H++R+ L +Q G
Sbjct: 288 ATHMRRAFLLYQMAG 302
>gi|193212745|ref|YP_001998698.1| hypothetical protein Cpar_1090 [Chlorobaculum parvum NCIB 8327]
gi|193086222|gb|ACF11498.1| protein of unknown function DUF218 [Chlorobaculum parvum NCIB 8327]
Length = 196
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/217 (14%), Positives = 73/217 (33%), Gaps = 28/217 (12%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
F+ +L F L L + ++IV+LG
Sbjct: 3 SFIKISLLFFLITSTLFATVYLGLGFLV-----SLHSTKPEKADVIVVLGG--------- 48
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ R+ + LYK+ ++ T I D + + + ++LE+GV
Sbjct: 49 --------DNGLRVEKGTELYKAGYAKNIVLTGI----DSRYYSPSRPNWRERRMLEAGV 96
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH--FGINTKA 201
+ I ++ S T++ A+ +S ++ + ++VS H+ R + G + +
Sbjct: 97 PKKAITVDIWSETTWEEAENTSDLMDKKGWNSALVVSDPPHMLRLHKTWTQAFAGSSKQF 156
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ + + + + + E +
Sbjct: 157 ILVTTEPEWWHPLFWWRDPFSKQFVINEIKKNIYYLL 193
>gi|191639632|ref|YP_001988798.1| hypothetical protein LCABL_28900 [Lactobacillus casei BL23]
gi|190713934|emb|CAQ67940.1| Putative exported protein [Lactobacillus casei BL23]
gi|327383745|gb|AEA55221.1| hypothetical protein LC2W_2892 [Lactobacillus casei LC2W]
Length = 377
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + V+LG P +++P+ + R+ ++ K + I+ G
Sbjct: 197 PKDSHHYFVVLGYAL-----SPNGKMQPTMK--KRLEIALKAAKKYPKSK-----ILVAG 244
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ L E+ V L+ G+ + I+LE S +T +NA FS + N + + L++S
Sbjct: 245 GVPENKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVENALFSVRELVNREATSATLITS 304
Query: 182 AYHLKRSQLYFQHFG 196
A H++R+ L +Q G
Sbjct: 305 ATHMRRAFLLYQMAG 319
>gi|156933279|ref|YP_001437195.1| hypothetical protein ESA_01091 [Cronobacter sakazakii ATCC BAA-894]
gi|156531533|gb|ABU76359.1| hypothetical protein ESA_01091 [Cronobacter sakazakii ATCC BAA-894]
Length = 237
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 48/160 (30%), Gaps = 13/160 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD + E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYRYRIQGALNAYNSGKVNYLLLS-----GDNAQQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV+ DI L+ T + + + I+++ +H +R+ H
Sbjct: 103 RKDLIAAGVDPADIVLDYAGFRTLDSIVRTRRVFDTNDF---IIITQRFHCERALFIALH 159
Query: 195 FGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
GI + S + +E
Sbjct: 160 MGIQAQCYAVPSPKNMLSVRVREFGARLGALADLYIFKRE 199
>gi|260169411|ref|ZP_05756222.1| hypothetical protein BruF5_13857 [Brucella sp. F5/99]
Length = 177
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 31/187 (16%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P + IV+L G SR+ + L K + + + +
Sbjct: 2 QPPVLSEPAEAIVVLTGG------------------QSRVKAGINLLKEKRGKRLLISGV 43
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ L + + L ++ D +L+T N S I+ +I
Sbjct: 44 HP--STNEEALQRATHADKSLFACCIDLDR-----TALNTVGNVAESERWIRANDYHRVI 96
Query: 178 LVSSAYHLKRSQLYF--QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V++ YH+ RS L + + + S + + EY+ L
Sbjct: 97 VVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYL 153
Query: 235 IAYYRGN 241
A R
Sbjct: 154 GAVVRLG 160
>gi|256851647|ref|ZP_05557035.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
gi|260661636|ref|ZP_05862548.1| conserved hypothetical protein [Lactobacillus jensenii 115-3-CHN]
gi|282933297|ref|ZP_06338683.1| putative membrane protein [Lactobacillus jensenii 208-1]
gi|297205255|ref|ZP_06922651.1| conserved hypothetical protein [Lactobacillus jensenii JV-V16]
gi|256615605|gb|EEU20794.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
gi|260547693|gb|EEX23671.1| conserved hypothetical protein [Lactobacillus jensenii 115-3-CHN]
gi|281302593|gb|EFA94809.1| putative membrane protein [Lactobacillus jensenii 208-1]
gi|297149833|gb|EFH30130.1| conserved hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 361
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 89/245 (36%), Gaps = 35/245 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF------FMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
+ L F ++ W + + + +++ ++ I+ L Y
Sbjct: 116 LTLFLGFALIGLWIYQKFTHWLHLPPYLAPILGLAPTIATYLTIVMLSFIINVFLYQFYP 175
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ-HSMH 113
+ N +++LG G I S +RI ++ K K+
Sbjct: 176 K-------NHRENYLIVLGAGLINGTKI-------STLLANRINTAIKYAKKVKKKTGNW 221
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--- 170
II+SGG L E+ +++G+ R+ I LE QS T +N FS +I+
Sbjct: 222 PKIIMSGGQGPDEELPEAAAMAEYAIKAGIPREIIILENQSTTTLENMTFSKKIIEKDTK 281
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ S+ YH+ R+ L + +N + + +YL L+E+
Sbjct: 282 NKPYTCKFFSNNYHIFRAALLAKKAKLNANGVGA-----------PTRLYYLPNALLREF 330
Query: 231 IGILI 235
GI +
Sbjct: 331 AGIFV 335
>gi|163844017|ref|YP_001628421.1| hypothetical protein BSUIS_A1836 [Brucella suis ATCC 23445]
gi|163674740|gb|ABY38851.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
Length = 177
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 31/187 (16%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P + IV+L G SR+ + L K + + + +
Sbjct: 2 QPPVLSEPAEAIVVLTGG------------------QSRVKAGINLLKEKRGKRLLISGV 43
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ L + + L ++ D +L+T NA S I+ +I
Sbjct: 44 HP--STNEEALQRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANNYHRVI 96
Query: 178 LVSSAYHLKRSQLYF--QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V++ YH+ RS L + + + S + + EY+ L
Sbjct: 97 VVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYL 153
Query: 235 IAYYRGN 241
A R
Sbjct: 154 GAVVRLG 160
>gi|126728434|ref|ZP_01744250.1| hypothetical protein SSE37_20627 [Sagittula stellata E-37]
gi|126711399|gb|EBA10449.1| hypothetical protein SSE37_20627 [Sagittula stellata E-37]
Length = 156
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+++ G G +E+ V E+GV + LE + +T +N S ++ M+ + +
Sbjct: 42 LLATGGALWGGPSEAEVIARLCAEAGVPETALVLEEAARNTRENIALSLPLLARMEARRV 101
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++V+ H R++L + G+ A +P + ++E +
Sbjct: 102 VIVTDRAHAPRARLVARRHGLEA---------AVSCPVPAPWSLGRARGVMREKVAYGWY 152
Query: 237 YYRG 240
+ RG
Sbjct: 153 WLRG 156
>gi|319899424|ref|YP_004159521.1| hypothetical protein BARCL_1288 [Bartonella clarridgeiae 73]
gi|319403392|emb|CBI76960.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 225
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 31/185 (16%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P + + I++L G RI ++L + + +
Sbjct: 64 FTPPHPLQKVDAIIVLTGGKN------------------RIETGLKLLEKGFGSRLLISG 105
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ + + L + N +L ++ Q+++T NA+ S+ IK + K +
Sbjct: 106 VSTT--THPNKLIRMMNINPQLFSCCIDI-----GYQAINTQGNAKESADWIKKHRYKTL 158
Query: 177 ILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V+ YH+ RS L FQ+ IN A A S I + L + EYI +
Sbjct: 159 YIVTHDYHMMRSLLEFQYLMPNINFIAYPIKQDVA-DSWIKEA---NQIRLLVLEYIKNI 214
Query: 235 IAYYR 239
R
Sbjct: 215 CVKIR 219
>gi|161619913|ref|YP_001593800.1| hypothetical protein BCAN_A2041 [Brucella canis ATCC 23365]
gi|225853431|ref|YP_002733664.1| hypothetical protein BMEA_A2054 [Brucella melitensis ATCC 23457]
gi|254690133|ref|ZP_05153387.1| hypothetical protein Babob68_08186 [Brucella abortus bv. 6 str.
870]
gi|254694623|ref|ZP_05156451.1| hypothetical protein Babob3T_08184 [Brucella abortus bv. 3 str.
Tulya]
gi|254696248|ref|ZP_05158076.1| hypothetical protein Babob28_00674 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700633|ref|ZP_05162461.1| hypothetical protein Bsuib55_07228 [Brucella suis bv. 5 str. 513]
gi|254707480|ref|ZP_05169308.1| hypothetical protein BpinM_11037 [Brucella pinnipedialis
M163/99/10]
gi|254708978|ref|ZP_05170789.1| hypothetical protein BpinB_01690 [Brucella pinnipedialis B2/94]
gi|254713593|ref|ZP_05175404.1| hypothetical protein BcetM6_09616 [Brucella ceti M644/93/1]
gi|254716053|ref|ZP_05177864.1| hypothetical protein BcetM_06394 [Brucella ceti M13/05/1]
gi|254731166|ref|ZP_05189744.1| hypothetical protein Babob42_08216 [Brucella abortus bv. 4 str.
292]
gi|256030505|ref|ZP_05444119.1| hypothetical protein BpinM2_07627 [Brucella pinnipedialis
M292/94/1]
gi|256045596|ref|ZP_05448476.1| hypothetical protein Bmelb1R_13928 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256158491|ref|ZP_05456389.1| hypothetical protein BcetM4_06532 [Brucella ceti M490/95/1]
gi|256253910|ref|ZP_05459446.1| hypothetical protein BcetB_06374 [Brucella ceti B1/94]
gi|256258387|ref|ZP_05463923.1| hypothetical protein Babob9C_13798 [Brucella abortus bv. 9 str.
C68]
gi|161336724|gb|ABX63029.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|225641796|gb|ACO01710.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|326409995|gb|ADZ67060.1| conserved hypothetical protein [Brucella melitensis M28]
Length = 177
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 31/187 (16%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P + IV+L G SR+ + L K + + + +
Sbjct: 2 QPPVLSEPAEAIVVLTGG------------------QSRVKAGINLLKEKRGKRLLISGV 43
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ L + + L ++ D +L+T NA S I+ +I
Sbjct: 44 HP--STNEEALQRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVI 96
Query: 178 LVSSAYHLKRSQLYF--QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V++ YH+ RS L + + + S + + EY+ L
Sbjct: 97 VVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYL 153
Query: 235 IAYYRGN 241
A R
Sbjct: 154 GAVVRLG 160
>gi|306837606|ref|ZP_07470477.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
gi|306407313|gb|EFM63521.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
Length = 177
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 58/185 (31%), Gaps = 31/185 (16%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P + IV+L G SR+ + L K + + + +
Sbjct: 2 QPPVLSEPAEAIVVLTGG------------------QSRVKAGINLLKEKRGKRLLISGV 43
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ L + + L ++ D +L+T NA S I+ +I
Sbjct: 44 HP--STNEEALQRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVI 96
Query: 178 LVSSAYHLKRSQLYF--QHFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V++ YH+ RS L + + + S + + EY+ L
Sbjct: 97 VVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTL---RVLFTEYVKYL 153
Query: 235 IAYYR 239
A R
Sbjct: 154 GAVVR 158
>gi|308187522|ref|YP_003931653.1| Protein sanA [Pantoea vagans C9-1]
gi|308058032|gb|ADO10204.1| Protein sanA [Pantoea vagans C9-1]
Length = 239
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + R+ + Y S K + + + GD E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYLYRMQGALNAYNSGKVNYLLLS-----GDNALQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+++GV+ DI L+ T + + + I+++ +H +R+
Sbjct: 103 RRDLIKAGVDPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALQ 159
Query: 195 FGINTKASCS 204
GI +
Sbjct: 160 LGIQAQCYAV 169
>gi|114570926|ref|YP_757606.1| hypothetical protein Mmar10_2376 [Maricaulis maris MCS10]
gi|114341388|gb|ABI66668.1| protein of unknown function DUF218 [Maricaulis maris MCS10]
Length = 195
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 71/226 (31%), Gaps = 43/226 (19%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ QS + + ++L S IG+ + + P + I++L
Sbjct: 1 MKQSWLWLRGLCFVVVLASMIGFAAYAGKVTGY---------DLPATDNTVDAIIVLTG- 50
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
R+ L + + + + + + + +
Sbjct: 51 -----------------DAGRLSAGGELLQDGRASHLMISGV-------HPSVTTADIRR 86
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L + L ++ DT NA+ +++ ++ +I+V+S YHL RS L F+
Sbjct: 87 QTGLGDDAFSCCVTLGREATDTVGNAREAAAYVQANGYDRLIIVTSDYHLPRSLLEFRSH 146
Query: 196 --GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G++ + + L L+EY R
Sbjct: 147 MPGVDLIPYPVRTQAPWQDV-------GALRLWLQEYAKYTTVQLR 185
>gi|62180771|ref|YP_217188.1| hypothetical protein SC2201 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62128404|gb|AAX66107.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322715246|gb|EFZ06817.1| Protein sanA [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 260
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 54/185 (29%), Gaps = 26/185 (14%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 50 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRY------RIQGALNAYNSGKV 103
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E + L+ +GV+ DI L+ T + + +
Sbjct: 104 NYLLLS-----GDNALQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 158
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
I+++ +H +R+ H GI + P N L+E
Sbjct: 159 TNDF---IIITQRFHCERALFIALHMGIQAQCYAV----------PSPKNMLTVR--LRE 203
Query: 230 YIGIL 234
+
Sbjct: 204 FGARF 208
>gi|189346479|ref|YP_001943008.1| hypothetical protein Clim_0953 [Chlorobium limicola DSM 245]
gi|189340626|gb|ACD90029.1| protein of unknown function DUF218 [Chlorobium limicola DSM 245]
Length = 197
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 71/209 (33%), Gaps = 26/209 (12%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L + + + L F+ P P + ++IV+LG
Sbjct: 9 LSIFILSVVTVTAAVFLSLGFAVSYPAQKP---EKADVIVVLGG---------------- 49
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ + LY + ++ T I + + GV + I++
Sbjct: 50 -DDGLRVEKGAELYNNGFAPNVLLTGIDARFYRPGRPNWRERRMR----DLGVPKKAIRV 104
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLN 208
+T+S T++ A +S ++ + ++ I+VS H+ R ++ G + K
Sbjct: 105 DTESETTWEEAVNASETLQKQKWESAIVVSDPPHMLRIHQTWRRVFEGSSKKIILVSTEP 164
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAY 237
+++ + N + E + Y
Sbjct: 165 DWWNALLWWKNKTSYRFVISEIKKNIYYY 193
>gi|297587158|ref|ZP_06945803.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
gi|297575139|gb|EFH93858.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
Length = 308
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ Y ++ ++ KIF + +++ + ++ + LL +L Y++ D + I
Sbjct: 89 ILYIAMIIVNLFKIFDLYKYIIGMNLYLSLMVLSHLLGNLIIKYRKIAT------DFDYI 142
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG IE S R+ + Y++ K +I+I G +
Sbjct: 143 VVLGGSMKG--------IELSDPIKQRMLTSFSYYRTDK------SIMIFSGGKSNGDIE 188
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI----ILVSSAYHL 185
ES+ N +++ ++ DI LE +++T QN ++ ++I+ ++ ++++ +H
Sbjct: 189 ESVAMKNFAVQNNIQDTDILLEKLAMNTMQNIEYVKTLIQQQDAEHDRKKVCVITNNFHA 248
Query: 186 KRSQLYFQHF--GINTKASCSDYLNAYYSII 214
R++L + S+ + + +
Sbjct: 249 FRTKLICNKMKVNWTVIPAESNLNSKINTYL 279
>gi|281492320|ref|YP_003354300.1| hypothetical protein LLKF_1900 [Lactococcus lactis subsp. lactis
KF147]
gi|281375984|gb|ADA65475.1| Hypothetical protein LLKF_1900 [Lactococcus lactis subsp. lactis
KF147]
Length = 361
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY--QRPLL 58
+LL + L + S+ ++ ++ + + + I+ L +
Sbjct: 118 LLLPIVVLTFLVVDWIHLSMGRLPDSWIWLKILGMV-YPILSIYLAWQFGIFFLSSWVYG 176
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
K+ N V+LG G + + +RI ++ + + ++
Sbjct: 177 RRVRKQRANYYVVLGAGLIQGEHVGKL-------LGNRILAAVKAVRDNETI-----LVF 224
Query: 119 SGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SGG ++E+ +E G + LE QS T++N FSS +I+
Sbjct: 225 SGGQGPDEKVSEARAMQRYAVEVLGFPIERTMLEDQSRTTYENLVFSSQLIREKFL---- 280
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+S YH+ R+ L+ + + +A +Y ++E+I +L
Sbjct: 281 FFTSDYHVFRAALFAAMLKLEAQG----------GKGGKTAMYYRVPAFIREFIAVLNY 329
>gi|270618447|ref|ZP_06221747.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270317953|gb|EFA29258.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 308
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 15/168 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+ L++ + C +K+ F + +L + P L+
Sbjct: 154 PLNTFVLLIIAAIIYCVHFKKLAKFIALISFTWLYIMSAPFTGLLLT----DNDDIPALT 209
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K IV+LG G+ + A R+ L Q I+ +
Sbjct: 210 LDEYKQAQAIVILGGGSYPTKELYAETAS-GAPQLERLRYAAFL-----QKETGLPILTT 263
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
G++E + +L +E ++ +T +NA F+ ++
Sbjct: 264 --GYSLIGISEGDLMAKEL-NQFFNVPTQWIENKARNTEENASFTKNI 308
>gi|159186332|ref|NP_355852.2| hypothetical protein Atu4812 [Agrobacterium tumefaciens str. C58]
gi|159141466|gb|AAK88637.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 232
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 70/226 (30%), Gaps = 44/226 (19%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
I + G ++ L ++ ++IV+LG
Sbjct: 33 WLWKRNSIVLGVIILGAIGLYGLALVSAGSLLVVE----------DPPAQADVIVVLGG- 81
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
R + +L+ K ++ GD
Sbjct: 82 ----------------DGPPRAAQAAKLWHEGKAP---LVLVTGYGDCD--------FIR 114
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ L+ SGV+ + E SL T++NA F+ ++ M K ILV+S +H +R+ F+
Sbjct: 115 DMLVRSGVDFAAVSTECLSLSTWENATFAQPILTGMGAKRAILVTSWFHSRRAVKRFRFV 174
Query: 196 G--INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
I + + + + + KEY L R
Sbjct: 175 MPQIQWISLPAQRTVSLWRLAINGDGVQ----VFKEYAKALFYDVR 216
>gi|294635520|ref|ZP_06714000.1| protein SanA [Edwardsiella tarda ATCC 23685]
gi|291091089|gb|EFE23650.1| protein SanA [Edwardsiella tarda ATCC 23685]
Length = 265
Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 55/185 (29%), Gaps = 17/185 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++ + + + + + + + Q + V+LG +
Sbjct: 3 WKRWIYGLIGVGIVLLLAALALDRWIS---WTTAPYIYDDVQDLPRREVGVVLGTAKYVA 59
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + RI + Y S K + + GD E + L+
Sbjct: 60 PGVINQYYRY------RIQGALNAYNSGKVSYLLLS-----GDNALQSYNEPVTMRRDLI 108
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + +++ +H +R+ H GI
Sbjct: 109 AAGVPSSDIVLDYAGFRTLDSIVRTRRVFDTNDFT---IITQRFHCERALFIAMHLGIQA 165
Query: 200 KASCS 204
+
Sbjct: 166 QCLAV 170
>gi|227502837|ref|ZP_03932886.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|227076567|gb|EEI14530.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
Length = 151
Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 35/160 (21%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
P SR+ + + LY T+I+S G E+ L++ GV+
Sbjct: 19 GHPGAMLRSRLDKALELYSGQ-------TVIVS-------GRGEAGAMAEYLIQRGVDPA 64
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
D+ +E + T +N + + S+ + +V++ +H R+ L+ H GI +
Sbjct: 65 DVLVEPAATSTNENLENAHSL---APDDVLQVVTNDFHALRTTLWAWHLGIAINVHPA-- 119
Query: 207 LNAYYSIIPLSANFYLTELALKEYIG-------ILIAYYR 239
+ + L+E + IL R
Sbjct: 120 RTPW---------LAMPSNYLREVVATPHSVARILWRRLR 150
>gi|269963292|ref|ZP_06177623.1| hypothetical protein VME_40070 [Vibrio harveyi 1DA3]
gi|269831931|gb|EEZ86059.1| hypothetical protein VME_40070 [Vibrio harveyi 1DA3]
Length = 207
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+RLYK K +++SGG+ E L++GV DI LE + +T
Sbjct: 65 TAVRLYKEKK----VSKLLLSGGNLAIDQKPEFESMKEYALDNGVPDSDIILERHAKNTV 120
Query: 159 QNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQH---FGINTKASCSDYLNAYYSI 213
+NAQ+SS +I + ++++A+H+KR++ F++ + + + +
Sbjct: 121 ENAQYSSEIILESEIAKRSVAILTTAFHIKRAKYLFKNALPQYLELHSYFVNDRSTRRD- 179
Query: 214 IPLSANFYLTELAL------KEYIGIL 234
N++LTE A+ E I L
Sbjct: 180 -----NWWLTESAISRVMHSHEVIKRL 201
>gi|224283840|ref|ZP_03647162.1| hypothetical protein BbifN4_08441 [Bifidobacterium bifidum NCIMB
41171]
gi|313140995|ref|ZP_07803188.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313133505|gb|EFR51122.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 145
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 12/112 (10%)
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSS 165
++ + SGG ++E+ L E V D + +E +S T +N +FS
Sbjct: 2 WEKQGKTGVFVASGGQGSDEVVSEAESMRRYLTESRHVPADAVLMEDRSTTTMENLRFSK 61
Query: 166 SMIKNMQG-----------KNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
++ G LV+S YH+ R+ Y H G Y
Sbjct: 62 EIMDARSGVQSVPGRRGLAYRCALVTSDYHVFRASEYAHHIGPKADGVRQPY 113
>gi|317132721|ref|YP_004092035.1| protein of unknown function DUF218 [Ethanoligenens harbinense
YUAN-3]
gi|315470700|gb|ADU27304.1| protein of unknown function DUF218 [Ethanoligenens harbinense
YUAN-3]
Length = 258
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 22/192 (11%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L + + F S +L + + W + + + P G +V+LG
Sbjct: 61 KLKISRVFRRFLWSVSLLCMAIVCWMAVSFTAIILVGRGSTPPA--------GATVVVLG 112
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G+ I + + + I SGG A++
Sbjct: 113 EGSYKGVPDFNQLI------------GITAAGNYLRTHPSAMCIASGGVTTDISPADATA 160
Query: 134 YNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA-YHLKRSQLY 191
+ L+ + + D I +E QS T +N +S +I+ I V++ +HL R+++
Sbjct: 161 IRDVLISQYQISSDRIFVENQSRTTHENMLYSKKIIQAHGLSRNIAVAAPAFHLLRAEMI 220
Query: 192 FQHFGINTKASC 203
+ G+
Sbjct: 221 ARRMGLVPYGLP 232
>gi|239630563|ref|ZP_04673594.1| transporter [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301067717|ref|YP_003789740.1| hypothetical protein LCAZH_2704 [Lactobacillus casei str. Zhang]
gi|239526846|gb|EEQ65847.1| transporter [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300440124|gb|ADK19890.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
Length = 360
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + V+LG P +++P+ + R+ ++ K + I+ G
Sbjct: 180 PKDSHHYFVVLGYAL-----SPNGKMQPTMK--KRLEIALKAAKKYPKSK-----ILVAG 227
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ L E+ V L+ G+ + ++LE S +T +NA FS + + + L++S
Sbjct: 228 GVPENKLTEATVMQKWLVAHGIAKKRVELEDLSTNTVENALFSVRELVDRGATSATLITS 287
Query: 182 AYHLKRSQLYFQHFG 196
A H++R+ L ++ G
Sbjct: 288 ATHMRRAFLLYRMAG 302
>gi|116805286|gb|ABK27699.1| hypothetical protein [Lactobacillus paracasei]
Length = 363
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + V+LG P +++P+ + R+ ++ K + I+ G
Sbjct: 183 PKDSHHYFVVLGYAL-----SPNGKMQPTMK--KRLEIALKAAKKYPKSK-----ILVAG 230
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ L E+ V L+ G+ + ++LE S +T +NA FS + + + L++S
Sbjct: 231 GVPENKLTEATVMQKWLVAHGIAKKRVELEDLSTNTVENALFSVRELVDRGATSATLITS 290
Query: 182 AYHLKRSQLYFQHFG 196
A H++R+ L ++ G
Sbjct: 291 ATHMRRAFLLYRMAG 305
>gi|126659613|ref|ZP_01730743.1| hypothetical protein CY0110_25226 [Cyanothece sp. CCY0110]
gi|126619059|gb|EAZ89798.1| hypothetical protein CY0110_25226 [Cyanothece sp. CCY0110]
Length = 243
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 54/180 (30%), Gaps = 38/180 (21%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
F+LL FI ++ +L++ L + I++LG
Sbjct: 23 LIFVLLIGFILTSLVFNVLVR----------LPINTNHSVDGILVLGGSIR--------- 63
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
R + II+S G ++
Sbjct: 64 ---------REIHAAEIASQY--EYQEVPIIVSQG-------SKPPCIKLIFQREQARMH 105
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ-HFGINTKASCSD 205
+ +E + TF N F +++ + +++S HL R++ Q H G A D
Sbjct: 106 KVWIEQCAYSTFDNFFFCVPLLQKHGVHKVKVITSQSHLPRAKWLSQIHLGAKGIAVEVD 165
>gi|110597465|ref|ZP_01385752.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
gi|110341009|gb|EAT59480.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
Length = 196
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 74/220 (33%), Gaps = 29/220 (13%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K+F L S G + L L Y + ++I++LG
Sbjct: 2 KLFLKLTLFALLSVCGAASAIFLTLGFLVSLYAG------NPEKTDVIIVLGG------- 48
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
S R+ + LY S + T I D + + A ++++
Sbjct: 49 ----------DSGLRVRKGAELYNSGYASHVILTGI----DERFYRPAHPNWRERRMIKL 94
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINT 199
GV + I+++TQS T++ A ++ ++ K+ I+VS H+ R + G +
Sbjct: 95 GVPKKAIRVDTQSTTTWEEAVNAADTMEKKGWKSAIVVSDPPHMLRLHQTWSKAFKGSSK 154
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++ N + + E L
Sbjct: 155 RFILVSTKPEWWRPFVWWKNKKSYQFVINEIKKNLYYAVM 194
>gi|332637176|ref|ZP_08416039.1| hypothetical protein WcibK1_00657 [Weissella cibaria KACC 11862]
Length = 349
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 76/213 (35%), Gaps = 23/213 (10%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+ LF F + +L+ + + K++ + V+LG G T+ +
Sbjct: 126 AWLAALFIFARVMELYFMLIFVIFLVSAIVYAAVTRKRESDYYVVLGAGLVNGETVGKL- 184
Query: 87 IEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-SGVE 144
+RI + ++ TI+ SGG ++E+ + +
Sbjct: 185 ------LGNRIKAATDAAQRRFDATGVYPTIVFSGGKGGDEKVSEAQAMRDYAVATLNYP 238
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKN---MQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
D LE QS T +N +FS +I + +S YH+ R+ L + F + +
Sbjct: 239 ADKTLLEDQSRTTRENMRFSRDIISKATGKIDPEFVYFTSEYHVFRAGLQARRFDVLAQG 298
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ +Y ++EYI +L
Sbjct: 299 -----------RGGNTPFYYRIPAFIREYIAVL 320
>gi|319442395|ref|ZP_07991551.1| protein [Corynebacterium variabile DSM 44702]
Length = 196
Score = 48.2 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG P + R+ L + + +I+SGG Q
Sbjct: 71 IVVLGARLDEDCARPQVLD-------DRLDAATEL----SRTHLLNPVIVSGGATQTDCP 119
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L E GV + + +E +S T N Q + SMI + G ++V+S+ H R+
Sbjct: 120 TEAAAMESGLHERGV-TNQVLIEDESDSTVANVQNTKSMISDRGGLA-VVVTSSPHNVRA 177
Query: 189 QLYFQHFGINTKAS 202
F+ GI A
Sbjct: 178 LQNFRDAGIEAVAY 191
>gi|296120046|ref|ZP_06838600.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
20306]
gi|295967200|gb|EFG80471.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
20306]
Length = 155
Score = 48.2 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+LG+ T P SR+ + ++L K I+ G
Sbjct: 3 RADPIVVLGSRVT--------DGRPGALLLSRLNKALKLAKRMP---DAPVIVTGDG--- 48
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E+ V L E G++ + I E + T +N + +++ N + + +V++ +H
Sbjct: 49 -----EAAVMARYLTERGIDPERIVEEPAATSTNENLENCFALVNNARVLH--VVTNEFH 101
Query: 185 LKRSQLYFQHFGINT 199
R++L+ H GI
Sbjct: 102 SLRTRLWAWHLGIPI 116
>gi|317403935|gb|EFV84404.1| hypothetical protein HMPREF0005_03307 [Achromobacter xylosoxidans
C54]
Length = 98
Score = 48.2 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 10/106 (9%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L+ GV D + + D++ A+ +S+ ++ + +++ +H+ R+ L +
Sbjct: 1 MRDYLIARGVPADRVVADRLGNDSWATARHASAYMRERGYASATVITQYFHVPRTMLALR 60
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G+ S P A L+E I R
Sbjct: 61 RHGVPQVGGAS----------PRYAEARDLYSILRELPAIAWYALR 96
>gi|332716396|ref|YP_004443862.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
gi|325063081|gb|ADY66771.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
Length = 243
Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 77/212 (36%), Gaps = 29/212 (13%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F+ +LL L F+ + P G+ I++L G
Sbjct: 30 FIRGLILLCVITLGAFSGGFLW----FADSVASMRPPEGAKGDAIIVLTGG--------- 76
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
Y RI + + L + + + + + + + ++ + V+
Sbjct: 77 ---------YQRIEQAVGLLRDGVGKRLLISGVNPA--TTRTQIRKMTQGSSDMFSCCVD 125
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ +++DT NA ++S I++ +I++V++ YH+ RS + T+
Sbjct: 126 -----MGYKAIDTIGNANEAASWIRDHGYSSIVVVTNNYHMHRSLHELHNASPQTQFIAY 180
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++A + A + L EY+ +IA
Sbjct: 181 PVISADLARTNWFAEPDVVRTMLYEYMKFVIA 212
>gi|300071488|gb|ADJ60888.1| hypothetical protein LLNZ_09840 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 361
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 86/239 (35%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY--QRPLL 58
+LL + L + S+ ++ ++ + + + ++ L +
Sbjct: 118 LLLPIVVLAFLLIDWVYLSMGRLPDSWIWLKILGIV-YPVLSIYLAWQFGIFFLSSWVYG 176
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
K+ V+LG G + + +RI ++ + + ++
Sbjct: 177 RRVRKQRAAYHVVLGAGLIQGEHVGKL-------LGNRILAAVKAVRDNETI-----LVF 224
Query: 119 SGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SGG ++E+ +E G + LE QS T++N FSS +IK +
Sbjct: 225 SGGQGPDEKISEARAMQKYAVEVLGFPIERTMLEDQSRTTYENLVFSSRLIKEKF----M 280
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+S YH+ R+ L+ I+ + +A +Y ++E+I ++
Sbjct: 281 FFTSDYHVFRAALFAATLKIDAQG----------GKGGKTAMYYRVPAFIREFIAVMNY 329
>gi|254228155|ref|ZP_04921584.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393954|ref|YP_003285808.1| hypothetical protein VEA_003183 [Vibrio sp. Ex25]
gi|151939228|gb|EDN58057.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262337548|gb|ACY51343.1| hypothetical protein VEA_003183 [Vibrio sp. Ex25]
Length = 205
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
++LYK K +++SGG+ E L +GV DI LE + +T
Sbjct: 63 TAVQLYKEKK----VSKLLLSGGNLAIDRKPEFESMREYALTNGVSESDIILEPHAKNTV 118
Query: 159 QNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQH---FGINTKASCSDYLNAYYSI 213
+NAQFS+ +I + ++++A+H+KR++ F++ ++ + +
Sbjct: 119 ENAQFSTEIIVESEVAKKSVAILTTAFHIKRAKHLFKNVLPQSLDLYGYFVNDRSTRRDN 178
Query: 214 IPLSANFYLTELALKEYIGIL 234
L+ + + E I L
Sbjct: 179 WWLTESAVSRVMHSHEVIKSL 199
>gi|254228166|ref|ZP_04921595.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393992|ref|YP_003285846.1| hypothetical protein VEA_003221 [Vibrio sp. Ex25]
gi|151939239|gb|EDN58068.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262337586|gb|ACY51381.1| hypothetical protein VEA_003221 [Vibrio sp. Ex25]
Length = 209
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
++LYK K +++SGG+ E L +GV DI LE + +T
Sbjct: 67 TAVQLYKEKK----VSKLLLSGGNLAIDRKPEFESMREYALTNGVSESDIILEPHAKNTV 122
Query: 159 QNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQH---FGINTKASCSDYLNAYYSI 213
+NAQFS+ +I + ++++A+H+KR++ F++ ++ + +
Sbjct: 123 ENAQFSTEIIVESEVAKKSVAILTTAFHIKRAKHLFKNVLPQSLDLYGYFVNDRSTRRDN 182
Query: 214 IPLSANFYLTELALKEYIGIL 234
L+ + + E I L
Sbjct: 183 WWLTESAVSRVMHSHEVIKSL 203
>gi|260575334|ref|ZP_05843334.1| protein of unknown function DUF218 [Rhodobacter sp. SW2]
gi|259022594|gb|EEW25890.1| protein of unknown function DUF218 [Rhodobacter sp. SW2]
Length = 163
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 54/172 (31%), Gaps = 21/172 (12%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG S R L + KH
Sbjct: 4 YVIVLGAAVWPGGVA-------SPTLARRASHAAALALQTGGTVITTG------GLGKHP 50
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V GV D I E S T++N + ++ G ++V+ YHL R
Sbjct: 51 PTEAAVAAAICAGLGVPGDRILTEVLSTTTYENLANAKRLMPA--GATAVIVTDYYHLPR 108
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++L GIN S + PL + L+E + + + R
Sbjct: 109 ARLTAWALGINATGS---FPRGGLRQTPLHRHLRQ---VLREALALPVYAVR 154
>gi|121602686|ref|YP_988436.1| hypothetical protein BARBAKC583_0098 [Bartonella bacilliformis
KC583]
gi|120614863|gb|ABM45464.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 202
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 77/226 (34%), Gaps = 36/226 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + + F LL F+ G I + ++ Y P + I++L G
Sbjct: 3 FFKHLFRYCPPVAFCLLSLFLIMGTHFVIFSEKVEQLYP-----PVSLSKADAIIVLTGG 57
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
RI +RL K + + + + P++ L ++ +
Sbjct: 58 ER------------------RIETGLRLLKQGLGSRLLISGVNATFHPKR--LLRNMHID 97
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+L E V+ Q+ +T NA+ S+ IK K + +V+ YH+ RS L ++
Sbjct: 98 PQLFECCVDL-----GYQATNTKSNAEESAVWIKKHHYKTLYIVTHDYHIARSLLELRYL 152
Query: 196 --GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
IN A + + EYI + R
Sbjct: 153 MPDINFIAYPIKENVTQNKV----KQLNKIRMLASEYIKNIGFQIR 194
>gi|163869202|ref|YP_001610454.1| hypothetical protein Btr_2487 [Bartonella tribocorum CIP 105476]
gi|161018901|emb|CAK02459.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 221
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 68/226 (30%), Gaps = 40/226 (17%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + ++ + G+ I L+ P + I++L G
Sbjct: 31 LFRYFPPTTLTLVVIVFIFWGGFIIFSEK---------TERLVPPTPLPKADAIIVLTGG 81
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
RI + L + + + + +
Sbjct: 82 EH------------------RIETGLHLLQKGLGSRLLISGV-------NTSTNLKSFMH 116
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N + + I + Q+++T NAQ S++ IK K + +V+ YH+ RS ++
Sbjct: 117 NMHISPQLISCCIDIGHQAINTRGNAQESAAWIKKHHYKTLYIVTHDYHIWRSMRELKYL 176
Query: 196 --GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
I+ A A + + +YI L Y R
Sbjct: 177 MPDIHFIAYPVKKSKAE----STIQQIKQARILIFQYIKTLQVYIR 218
>gi|319404819|emb|CBI78420.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 231
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 31/185 (16%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L PQ + I++L G RI ++L + + +
Sbjct: 70 LTPPQPLPKADAIIVLTGGKN------------------RIETGLKLLQKKLGSRLLISG 111
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ + + L + N +L V+ D Q+++T NA+ S+ IK + K +
Sbjct: 112 VNTT--THPNRLIRIMNINPRLFSCCVDIDH-----QAVNTQGNAKESAHWIKKHRYKTL 164
Query: 177 ILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V+ YH+ RS L F++ +N A N + I + L L EYI +
Sbjct: 165 YIVTHDYHMIRSLLEFKYLMPDVNFIAYPIK-QNVADNWIKQANQIRLLAL---EYIKSI 220
Query: 235 IAYYR 239
R
Sbjct: 221 SVKIR 225
>gi|153876561|ref|ZP_02003819.1| sanA protein [Beggiatoa sp. PS]
gi|152066975|gb|EDN66181.1| sanA protein [Beggiatoa sp. PS]
Length = 169
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 8/146 (5%)
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ RI T++LYK+ K I++ G E L+
Sbjct: 9 KYLRHGRINRYFKYRIDATVQLYKAGKIKH-----ILASGTNHTKYYNEPNEMRKALMAQ 63
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV R+ I L+ T + + +I+++S ++H KR+ +GI
Sbjct: 64 GVPREAITLDYAGFRTLDSVIRCKKIFSQ---TDIVVISQSFHNKRALFISDFYGITAIG 120
Query: 202 SCSDYLNAYYSIIPLSANFYLTELAL 227
+ + + + A+
Sbjct: 121 FNARDVPLRDDLKTPFREIFARSKAV 146
>gi|302385322|ref|YP_003821144.1| protein of unknown function DUF218 [Clostridium saccharolyticum
WM1]
gi|302195950|gb|ADL03521.1| protein of unknown function DUF218 [Clostridium saccharolyticum
WM1]
Length = 274
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 96/266 (36%), Gaps = 51/266 (19%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + +++ ++ + + + + GI+ ++++ L F+ ++
Sbjct: 34 LMFAAVCILLPLGWETYVKHKEKIPLWIPVSVITMCCTGILVFMVVEFLVFT----GVAA 89
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + +++LG +++ R+ + + +++SG
Sbjct: 90 RDASNLDYVIVLGARVKETGISKSLK--------KRLDKAIEYADENPS----VILVLSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-------- 172
G ++E+ + L+ +GV + + LET+S T +N +S I+ Q
Sbjct: 138 GQGADEPVSEAAAMRDYLVFNGVNEEQLILETRSTSTVENIAYSRVAIEEDQAERKARRQ 197
Query: 173 -----------------GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
I +++S +H+ R+Q + +GI Y I
Sbjct: 198 NNPIFMEPGTFAEVPDKPIKIGVLTSDFHVYRAQQIGKKWGIP----------DIYGISC 247
Query: 216 LSANFYLTELALKEYIGILIAYYRGN 241
S ++E IL GN
Sbjct: 248 GSDPVLFVHFCVRECAAILKDKLVGN 273
>gi|171910674|ref|ZP_02926144.1| hypothetical protein VspiD_05860 [Verrucomicrobium spinosum DSM
4136]
Length = 211
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 67/239 (28%), Gaps = 41/239 (17%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+++ L + K+ + +L + I + L + R + + I
Sbjct: 2 ITFLARLAFRLVKLILVVAVLL--------GVAWIFRESLLRTAARTWVVDDPVLKADAI 53
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI-IISGGDPQKHGL 128
V+LG G R F +Y + + + T S
Sbjct: 54 VVLGGGRDW-----------------RPFTAADMYLAGQSTVVLVTQPEKSPSQNLLQQP 96
Query: 129 AESIVYNNKLLESGVERDDIKL-ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ + L + GV I+ T A + Q K+I++ + +H +R
Sbjct: 97 SEAEINTTVLTKKGVPSTAIRPLGQNVTSTRDEALALRDWVIAHQAKDILIPTDPFHTRR 156
Query: 188 SQLYFQHF--------GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ FQ + + F + E L
Sbjct: 157 ARWIFQRALEGTGATVHVRAIPHP---RYSETDWWRHEDGFIAFQT---ELAKSLYYLL 209
>gi|125624693|ref|YP_001033176.1| hypothetical protein llmg_1911 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493501|emb|CAL98480.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 361
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 86/239 (35%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY--QRPLL 58
+LL + L + S+ ++ ++ + + + ++ L +
Sbjct: 118 LLLPIVVLAFLLIDWVYLSMGRLPDSWIWLKILGIV-YPVLSIYLAWQFGIFFLSSWVYG 176
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
K+ V+LG G + + +RI ++ + + ++
Sbjct: 177 RRVRKQRAAYHVVLGAGLIQGEHVGKL-------LGNRILAAVKAVRDNETI-----LVF 224
Query: 119 SGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SGG ++E+ +E G + LE QS T++N FSS +IK +
Sbjct: 225 SGGQGPDEKISEARAMQKYAVEVLGFPIERTMLEDQSRTTYENLVFSSRLIKEKF----M 280
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+S YH+ R+ L+ I+ + +A +Y ++E+I ++
Sbjct: 281 FFTSDYHVFRAALFAATLKIDAQG----------GKGGKTAMYYRVPAFIREFIAVMNY 329
>gi|300932867|ref|ZP_07148123.1| hypothetical protein CresD4_02296 [Corynebacterium resistens DSM
45100]
Length = 341
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 74/262 (28%), Gaps = 56/262 (21%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +R + C L + + + S + + I++LG G
Sbjct: 86 SRKVRALGGFGCLAWLGLANHFSRFVLKGVASTKKLVNESPHSDRQLAAADAIIVLGAGL 145
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC------TIIISGGDPQKHGLAE 130
T PS R+ ++ + + II+SGG +E
Sbjct: 146 TGRK--------PSPVLARRLDRAAQVARQLEAIRPAVVAGQQGVIIVSGGQGADEPCSE 197
Query: 131 SIVYNNKLL------------------------ESGVERDDIKLETQSLDTFQNAQFSS- 165
+ L E+ I E ++ + N
Sbjct: 198 AEAMARYLRTEAQLGGADSRWEVLQEDEATSTEENLANSTRILQERRAGTSGTNTGTPGT 257
Query: 166 -------SMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPL 216
++ + I++V+S +H+ R++ + +H A P
Sbjct: 258 NTANPGSRTKRDDEMCTIVVVTSDFHVPRTRWHAKHAERDFPGVAYRVVGAETPAGARPA 317
Query: 217 SANFYLTELALKEYIGILIAYY 238
+ ++EY+ ++ +
Sbjct: 318 AY--------VREYVASVVQVW 331
>gi|261749638|ref|YP_003257324.1| putative SanA-like protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497731|gb|ACX84181.1| putative SanA-like protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 175
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 20/162 (12%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + + RI L+ K II GD ++ E +
Sbjct: 20 GVVLGTSKYLHGGGLNAYFKYRIDAACFLFYQKK-----IRYIIVSGDNREKNYNEPKMM 74
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+L+ G+ I + + T + + + ++S +H +R+
Sbjct: 75 KKELISKGIPAYFIYEDFSGISTIHSVLRVYKVFNQKKFT---IISQRFHNERAIFIGNC 131
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
G++ + L+ + + +E + + A
Sbjct: 132 LGLDVIGFNAQSLS------------FDCKTQFREILARIKA 161
>gi|240851278|ref|YP_002972681.1| hypothetical membrane protein [Bartonella grahamii as4aup]
gi|240268401|gb|ACS51989.1| hypothetical membrane protein [Bartonella grahamii as4aup]
Length = 229
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 75/227 (33%), Gaps = 40/227 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L + ++ + G+ + L P+ + I++L
Sbjct: 38 FLFRYFPPTTLTLAIIVFIFWGGFIVFSEK---------TERLSPPKPLPKADAIIVLTG 88
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G RI + L + + + + + + +
Sbjct: 89 GEN------------------RIETGLHLLQKGLGSRLLISGVNTTTNLKG-------FM 123
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+N+ + + I + Q+++T NA+ S++ IK K + +V+ YH+ RS ++
Sbjct: 124 HNRHITPRLVSCCIDIGHQAINTRGNAKESATWIKKHHFKTLYIVTHDYHMWRSMRELKY 183
Query: 195 F--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
I+ A NA +I + L +YI L Y R
Sbjct: 184 LMPDIHFIAYPVKKSNAESAI----QQINQIRILLFQYIKTLQVYLR 226
>gi|306835435|ref|ZP_07468453.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304568671|gb|EFM44218.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 151
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 35/160 (21%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
P SR+ + + LY T+I+S G E+ L + GV+
Sbjct: 19 GHPGAMLRSRLDKALELYSGQ-------TVIVS-------GRGEAGAMAEYLFQRGVDPA 64
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
D+ +E + T +N + + S+ + +V++ +H R+ L+ H GI +
Sbjct: 65 DVLVEPAATSTNENLENAHSL---APDAVLQVVTNDFHALRTTLWAWHLGIAINVHPA-- 119
Query: 207 LNAYYSIIPLSANFYLTELALKEYIG-------ILIAYYR 239
+ + L+E + IL R
Sbjct: 120 RTPW---------LSMPSNYLREVVATPHSAARILWRRLR 150
>gi|156740504|ref|YP_001430633.1| hypothetical protein Rcas_0485 [Roseiflexus castenholzii DSM 13941]
gi|156231832|gb|ABU56615.1| protein of unknown function DUF218 [Roseiflexus castenholzii DSM
13941]
Length = 225
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 26/184 (14%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + IV+LG G + R + LY+ + T +
Sbjct: 60 PGRTARADAIVVLGGGFPL-----------------RDQHAIDLYREGWAREIWRTGEMP 102
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG A ++ GV T+ + + + M + + + +I+V
Sbjct: 103 GGS------AVVQKARRLAIQQGVPAAAFVPLIT-DSTWTDGREIARMARERKVERVIIV 155
Query: 180 SSAYHLKRSQLYFQH--FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ H +R+ +H G +A N Y+ + + E +
Sbjct: 156 TDWSHSRRALCVIKHHLAGSGIEAFYDGPRNPPYTPFDWWHHPEGRRIVAGELLKTFYYL 215
Query: 238 YRGN 241
R
Sbjct: 216 LRFG 219
>gi|319407779|emb|CBI81430.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 233
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 35/187 (18%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P + I++L G RI ++L + + +
Sbjct: 72 FTPPHPLPKADAIIVLTGGKN------------------RIETGLKLLQKKLGSRLLISG 113
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ + + L + N +L V+ D Q+++T NA+ S+ IK + K +
Sbjct: 114 VNT--RTHPNKLIRIMNINPRLFSCCVDIDH-----QAINTRGNAEESAHWIKKNRYKTL 166
Query: 177 ILVSSAYHLKRSQLYFQHF--GINTKASCS--DYLNAYYSIIPLSANFYLTELALKEYIG 232
+V+ YH+ RS L F++ IN A D +++ + L EYI
Sbjct: 167 YIVTDDYHMTRSLLEFKYLMPDINFIAYPIKQDVADSWIKQVNQIRLLAL------EYIK 220
Query: 233 ILIAYYR 239
+ R
Sbjct: 221 NISVKIR 227
>gi|319406304|emb|CBI79941.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 226
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 31/185 (16%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L P + I++L G RI + L + + +
Sbjct: 65 LTPPHPLPKVDAIIVLTGGKN------------------RIETGLELLQKKLGSRLLISG 106
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ + + L + N +L V+ D + +T NA+ S+ I + K +
Sbjct: 107 VNTTIH--PNKLIRRMNINPRLFACCVDIDH-----HATNTQGNAKESAHWINKHRYKTL 159
Query: 177 ILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V+ YH+ RS L F++ IN A N S I + L L EY+ +
Sbjct: 160 YIVTHDYHMIRSLLEFKYLMPNINFIAYPIK-QNVTDSWIKQANQIRLLAL---EYVKNI 215
Query: 235 IAYYR 239
R
Sbjct: 216 SVKIR 220
>gi|305680109|ref|ZP_07402919.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305660729|gb|EFM50226.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length = 162
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 66/178 (37%), Gaps = 25/178 (14%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I++LG+ T P SR+ + + ++ + G
Sbjct: 2 AIIVLGSHTY--------EGRPGAVLASRLRKAHDIAARYPTETIVVS-----------G 42
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM------IKNMQGKNIILVSS 181
E+ V L+++G++ I +E + T +N + S ++ +G+ ++V+S
Sbjct: 43 QDEAPVMATWLIDNGIDPARILIEPTATSTNENLERSLALLRSSGHPDPSRGQPFMVVTS 102
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+H R+ ++ H GI + L + + + L+A++R
Sbjct: 103 DFHKFRTLVWAWHLGIPITVLTAVTLPPHRQLDFARELTAFPHSLARVLWRRLVAWWR 160
>gi|170749389|ref|YP_001755649.1| hypothetical protein Mrad2831_2982 [Methylobacterium radiotolerans
JCM 2831]
gi|170655911|gb|ACB24966.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 258
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/230 (13%), Positives = 71/230 (30%), Gaps = 41/230 (17%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ R+I +C + + ++ ++R + IV L G
Sbjct: 29 RPRERRRIALWTCSLGAGLGMLALFAGFLVFVSALARHER-----TPTDRADGIVALTGG 83
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
RI + + L + T + + +A
Sbjct: 84 ------------------AQRIGDAIDLLAGGYGRRLLITGV--NERTSRDEIARLNPTQ 123
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L+ V+ D ++ +T NA + ++ + + +V+S YH+ R+ + H
Sbjct: 124 RALIACCVDLD-----YRARNTIGNAIETRRWMRAHRFSTVAVVTSNYHMPRTLVELDHA 178
Query: 196 GIN---TKASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + P +A + EY+ L+++ R
Sbjct: 179 LQDSDRVLPHPVVTEAFDADRWWQNPPAARLLAS-----EYMKFLVSWVR 223
>gi|146343248|ref|YP_001208296.1| hypothetical protein BRADO6468 [Bradyrhizobium sp. ORS278]
gi|146196054|emb|CAL80081.1| conserved hypothetical protein; putative exported protein
[Bradyrhizobium sp. ORS278]
Length = 221
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 42/225 (18%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTIL--LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R + + + L FI L L+ + + ++ + IV+L G+
Sbjct: 4 RALAGLVATLGLGFFIAAVGFVGFLSQLRGAE---------IKPERKADGIVVLTGGS-- 52
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
SR+ + + L + + + D + + S+
Sbjct: 53 ----------------SRVSDAVELLAGGYGRRLLISGVHPTNDA--NDITRSLPEARSF 94
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--G 196
+ V+ D +++T NA + K++++V+S YH+ R+ H
Sbjct: 95 INCCVDLD-----YSAINTRSNAAQTRRWAAERGFKSLVVVTSNYHMPRAIAELSHAMPS 149
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI--AYYR 239
++ + + P + L L EY + A R
Sbjct: 150 MDLIPYAV--VGEKWRDEPWWTSGPTLRLLLSEYAKYVAAEARLR 192
>gi|304414296|ref|ZP_07395664.1| hypothetical protein REG_1381 [Candidatus Regiella insecticola
LSR1]
gi|304283510|gb|EFL91906.1| hypothetical protein REG_1381 [Candidatus Regiella insecticola
LSR1]
Length = 244
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 65/215 (30%), Gaps = 30/215 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R I + +F + I + K + Y+ L P + G +
Sbjct: 9 KRIIISLLVIFGIFIIMAIAIDRWVSWKTTLYIYEEVQLLPHREV----------GVVLG 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
R + R+ + Y S K + + GD +H E L+
Sbjct: 59 TAKYYRRGVINQFYRYRMQGALNAYNSGKISYLLLS-----GDNAQHNYNEPKTMRRDLI 113
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + +++ +H +R+ + G+
Sbjct: 114 TAGVAPADIVLDYAGFRTLDSIVRTHKVFATNDFT---IITQRFHCERALFIAFYMGLQA 170
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ IP N +L ++E
Sbjct: 171 QCYA----------IPSPKNMFLVR--IREVFARF 193
>gi|170024788|ref|YP_001721293.1| hypothetical protein YPK_2563 [Yersinia pseudotuberculosis YPIII]
gi|169751322|gb|ACA68840.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
YPIII]
Length = 245
Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 20/160 (12%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + GD +H E +
Sbjct: 48 GVVLGTAKYFRTGGINQFYQYRIQGAINAYNSGKISYLLLS-----GDNAQHSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV DI L+ T + + + I+++ +H +R+ +
Sbjct: 103 RRDLIAAGVAPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAMY 159
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
GI + P N ++E L
Sbjct: 160 MGIQAQCFAV----------PSPKNMLSVR--VREIFARL 187
>gi|209967333|ref|YP_002300248.1| hypothetical protein RC1_4097 [Rhodospirillum centenum SW]
gi|209960799|gb|ACJ01436.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 244
Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 76/222 (34%), Gaps = 45/222 (20%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+F + + + F G + L P P+ + + IV+L G+
Sbjct: 36 LFGGALTLAVAWFAGLFLFAAGL----------PRTPPEDDRQTDAIVVLTGGS------ 79
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
R+ L ++ + + + + G + L S L
Sbjct: 80 ------------ERLAAGFELLRAHRARKLFISGVY-RGVDVQELLRLSRQAPGDLECC- 125
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF----GIN 198
I L + DT NA ++ ++ +++ +V++ YH+ RS + F+ +
Sbjct: 126 -----IVLGYAADDTEGNAAETALWVRQEGFRSLRVVTANYHMPRSLVEFRRALPEVDLI 180
Query: 199 TKAS-CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++ P +A+ + EY L+A+ R
Sbjct: 181 AHPVAPPNVRLEHWWRWPGTASL-----IVGEYNKFLLAWTR 217
>gi|239813908|ref|YP_002942818.1| hypothetical protein Vapar_0901 [Variovorax paradoxus S110]
gi|239800485|gb|ACS17552.1| protein of unknown function DUF218 [Variovorax paradoxus S110]
Length = 201
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 26/212 (12%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ +LL + + +I ++ + + P P + ++LG +
Sbjct: 4 VLWTVLLAGLLAYLVIAAVIWRRAAEALANPPQRP-----ADAALVLG-------NRAFL 51
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+P+ R+ + L + +++SGG ++ G E+ V G
Sbjct: 52 DGKPNPCLTGRVDAAIALADAGLAKQ----LVLSGGVDKEDGRIEAEVMQRHARAQGYAG 107
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT---KAS 202
+ LE S T N S ++K +I+VS YHL R + + G +
Sbjct: 108 P-LLLEPASTSTRLNLAMSRPLLKAAGIHGVIVVSEPYHLWRVERLARASGFDKDFDVQY 166
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + + AL+E + ++
Sbjct: 167 AAASTRCWRRWG------MVFKGALREPLAVV 192
>gi|22126538|ref|NP_669961.1| hypothetical protein y2659 [Yersinia pestis KIM 10]
gi|45441225|ref|NP_992764.1| hypothetical protein YP_1400 [Yersinia pestis biovar Microtus str.
91001]
gi|51595862|ref|YP_070053.1| hypothetical protein YPTB1525 [Yersinia pseudotuberculosis IP
32953]
gi|108806802|ref|YP_650718.1| hypothetical protein YPA_0805 [Yersinia pestis Antiqua]
gi|108812630|ref|YP_648397.1| hypothetical protein YPN_2469 [Yersinia pestis Nepal516]
gi|145598748|ref|YP_001162824.1| hypothetical protein YPDSF_1464 [Yersinia pestis Pestoides F]
gi|149366431|ref|ZP_01888465.1| putative exported protein [Yersinia pestis CA88-4125]
gi|153948508|ref|YP_001401433.1| hypothetical protein YpsIP31758_2464 [Yersinia pseudotuberculosis
IP 31758]
gi|162419195|ref|YP_001607389.1| hypothetical protein YpAngola_A3021 [Yersinia pestis Angola]
gi|165924495|ref|ZP_02220327.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939644|ref|ZP_02228188.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|166009292|ref|ZP_02230190.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211809|ref|ZP_02237844.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400421|ref|ZP_02305934.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421767|ref|ZP_02313520.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424377|ref|ZP_02316130.1| putative sanA protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186894949|ref|YP_001872061.1| hypothetical protein YPTS_1635 [Yersinia pseudotuberculosis PB1/+]
gi|218928651|ref|YP_002346526.1| hypothetical protein YPO1510 [Yersinia pestis CO92]
gi|229841490|ref|ZP_04461649.1| hypothetical protein YPH_3876 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229843602|ref|ZP_04463745.1| hypothetical protein YPF_1990 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229894294|ref|ZP_04509477.1| hypothetical protein YPS_2067 [Yersinia pestis Pestoides A]
gi|229903025|ref|ZP_04518141.1| hypothetical protein YP516_2782 [Yersinia pestis Nepal516]
gi|270486819|ref|ZP_06203893.1| protein SanA [Yersinia pestis KIM D27]
gi|294503487|ref|YP_003567549.1| hypothetical protein YPZ3_1377 [Yersinia pestis Z176003]
gi|21959539|gb|AAM86212.1|AE013868_6 putative oxidoreductase [Yersinia pestis KIM 10]
gi|45436085|gb|AAS61641.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51589144|emb|CAH20764.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|108776278|gb|ABG18797.1| hypothetical protein YPN_2469 [Yersinia pestis Nepal516]
gi|108778715|gb|ABG12773.1| hypothetical protein YPA_0805 [Yersinia pestis Antiqua]
gi|115347262|emb|CAL20156.1| putative exported protein [Yersinia pestis CO92]
gi|145210444|gb|ABP39851.1| hypothetical protein YPDSF_1464 [Yersinia pestis Pestoides F]
gi|149290805|gb|EDM40880.1| putative exported protein [Yersinia pestis CA88-4125]
gi|152960003|gb|ABS47464.1| putative sanA protein [Yersinia pseudotuberculosis IP 31758]
gi|162352010|gb|ABX85958.1| putative sanA protein [Yersinia pestis Angola]
gi|165912441|gb|EDR31074.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923555|gb|EDR40687.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991847|gb|EDR44148.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207580|gb|EDR52060.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960252|gb|EDR56273.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050370|gb|EDR61778.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057226|gb|EDR66989.1| putative sanA protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186697975|gb|ACC88604.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
PB1/+]
gi|229679935|gb|EEO76035.1| hypothetical protein YP516_2782 [Yersinia pestis Nepal516]
gi|229689210|gb|EEO81273.1| hypothetical protein YPF_1990 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697856|gb|EEO87903.1| hypothetical protein YPH_3876 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229703692|gb|EEO90708.1| hypothetical protein YPS_2067 [Yersinia pestis Pestoides A]
gi|262361530|gb|ACY58251.1| hypothetical protein YPD4_1343 [Yersinia pestis D106004]
gi|262365731|gb|ACY62288.1| hypothetical protein YPD8_1605 [Yersinia pestis D182038]
gi|270335323|gb|EFA46100.1| protein SanA [Yersinia pestis KIM D27]
gi|294353946|gb|ADE64287.1| hypothetical protein YPZ3_1377 [Yersinia pestis Z176003]
gi|320015619|gb|ADV99190.1| hypothetical protein YPC_2643 [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 245
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 20/160 (12%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + GD +H E +
Sbjct: 48 GVVLGTAKYFRTGGINQFYQYRIQGAINAYNSGKISYLLLS-----GDNAQHSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV DI L+ T + + + I+++ +H +R+ +
Sbjct: 103 RRDLIAAGVAPADIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAMY 159
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
GI + P N ++E L
Sbjct: 160 MGIQAQCFAV----------PSPKNMLSVR--VREIFARL 187
>gi|297193393|ref|ZP_06910791.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197718291|gb|EDY62199.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 200
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T LY+ + T S + E+ Y + +E GV D I +E ++ +T
Sbjct: 19 DVTADLYRQGMAPVVVFTGATSRTTHDRMPRGEAEHYRERAVELGVPNDAILVEPRARNT 78
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHF 195
+N +FS ++++ LVS Y +R+ +
Sbjct: 79 GENIRFSRALLEEQGIPVSSVLLVSKPYEERRAYATARKL 118
>gi|163759927|ref|ZP_02167011.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
gi|162282885|gb|EDQ33172.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
Length = 220
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 72/232 (31%), Gaps = 45/232 (19%)
Query: 14 HLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
L +I + + + F IG+ + L +P D + IV+L
Sbjct: 2 RRLGHHALRILTIGAILGVTFVVIGFFRFTDEI---------AELKAPGTSVDVDAIVVL 52
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G Y RI + + L + + + + L +
Sbjct: 53 TGG------------------YQRIEQALALLEDGIGDRLLISGVNP--STSSAALRRAT 92
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ + V+ Q+LDT NA ++ I+ +++V++ YH+ RS +
Sbjct: 93 GTQSATFDCCVDI-----GYQALDTIGNANETADWIRQNNYVRVLVVTNNYHMPRSLMEL 147
Query: 193 QHFGINT--KASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ A D + P++ EY +A R
Sbjct: 148 SQASPDVSFVAYPVTHADLKTEAWLTDPVA-----LRTLFTEYAKYSLARLR 194
>gi|260060609|ref|YP_003193689.1| putative transport-related membrane protein [Robiginitalea
biformata HTCC2501]
gi|88784739|gb|EAR15908.1| putative transport-related membrane protein [Robiginitalea
biformata HTCC2501]
Length = 214
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 57/174 (32%), Gaps = 18/174 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I G + + +RI T+ LY++ K + ++ GD
Sbjct: 41 DPDAIPYSRVGLVLGTARHRAEGGMNPFYENRIAATLALYRAGK-----ISFVLVSGDNG 95
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E L+ G+ + I L+ T + + + + ++S +H
Sbjct: 96 TIYYNEPDTIKKDLVAGGIPAERIFLDYAGFRTLDSMVRAKIVFG---LDTVTVISQEFH 152
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+R+ G+ + + + T+L ++EY + +
Sbjct: 153 NERALYIAGKKGLYARGFNARGVAGGAG----------TKLQVREYFARVKVFL 196
>gi|225020641|ref|ZP_03709833.1| hypothetical protein CORMATOL_00648 [Corynebacterium matruchotii
ATCC 33806]
gi|224946587|gb|EEG27796.1| hypothetical protein CORMATOL_00648 [Corynebacterium matruchotii
ATCC 33806]
Length = 162
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 66/178 (37%), Gaps = 25/178 (14%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I++LG+ T P SR+ + + ++ + G
Sbjct: 2 AIIVLGSHTYAG--------RPGAVLASRLRKAHDIATRYPTETIVVS-----------G 42
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM------IKNMQGKNIILVSS 181
E+ V L+++G++ I +E + T +N + S ++ +G+ ++V+S
Sbjct: 43 QDEAPVMATWLIDNGIDPARILIEPTATSTNENLERSLALLRSSGHPDPSRGQPFMVVTS 102
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+H R+ ++ H GI + L + + + L+A++R
Sbjct: 103 DFHKFRTLVWAWHLGIPITVLTAVTLPPHRQLDFARELTAFPHSLARVLWRRLVAWWR 160
>gi|169350021|ref|ZP_02866959.1| hypothetical protein CLOSPI_00761 [Clostridium spiroforme DSM 1552]
gi|169293234|gb|EDS75367.1| hypothetical protein CLOSPI_00761 [Clostridium spiroforme DSM 1552]
Length = 426
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 58/138 (42%), Gaps = 11/138 (7%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P N + ++ G + T ++ E R+ T+ + I+++
Sbjct: 111 PDGLPMDNSLCIVTLGYQLDQTTGEMQQEL----IDRLIVTLNSANRYP----NAYIVVT 162
Query: 120 GGDPQKHGLAE--SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNI 176
GG ++ L+ +GV+ + I +E ++ T NA + ++K K+I
Sbjct: 163 GGGTSPADPSKTEGEEMAKWLIANGVDENRIIVENKAPTTVGNATNTFRLLKEKPEVKSI 222
Query: 177 ILVSSAYHLKRSQLYFQH 194
++SS+ H++R+ FQ
Sbjct: 223 AMISSSSHIQRAVAIFQA 240
>gi|254424039|ref|ZP_05037757.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191528|gb|EDX86492.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 357
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 78/243 (32%), Gaps = 39/243 (16%)
Query: 36 IGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGN------GTTIIPTIPAIRI 87
+ LL + Q + +L + IV+ G+ + + A
Sbjct: 101 FSSTPLSAGLLVNRSEQSTRAADILGTRNLATAVAIVVFGDRNDINRAISPTSDMAASYA 160
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
RI LY ++ ++++ G + + + L ++G+ D
Sbjct: 161 PAYTALAPRITYAADLYAEARRRGAAPMVMVTAGSVAEDTNQRA-IIREMLADNGIASRD 219
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQ----------------GKNIILVSSAYHLKRSQLY 191
I + + LD A+ +++ + ++LV+ A + R++L
Sbjct: 220 ILIRSTGLDVRGTAEAVEGFLESQRLIARREQRLEPDAIRDVPWVVLVAPAIIMSRAELT 279
Query: 192 FQHFGINTKASCSDYLN--------------AYYSIIPLSANFYLTELALKEYIGILIAY 237
F+ G+ T + + ++IP LT E + L +
Sbjct: 280 FEQIGLRTIPRPTSFSTLSVDTDGPSDQIANMLLNLIPSVDTLRLTSEYWDERLTYLYYF 339
Query: 238 YRG 240
RG
Sbjct: 340 ARG 342
>gi|121997578|ref|YP_001002365.1| hypothetical protein Hhal_0787 [Halorhodospira halophila SL1]
gi|121588983|gb|ABM61563.1| protein of unknown function DUF218 [Halorhodospira halophila SL1]
Length = 56
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 192 FQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGILIAYY 238
F+ G+ + + + +P + +TE AL EY+G++ A +
Sbjct: 4 FEAAGLEPIPAPTRHKTGVEARDESSYWVPSAKALRMTERALYEYMGLVAARF 56
>gi|318040905|ref|ZP_07972861.1| hypothetical protein SCB01_04324 [Synechococcus sp. CB0101]
Length = 228
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 30/242 (12%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV- 70
W + + ++ F +L IG+G++ +L L + ++ LL+ I
Sbjct: 2 LWIQWREPLLQLLFTPWLLLPLVAIGFGLVLCLLPWSLPWPWRALLLTTLVLLSSGIYSP 61
Query: 71 --------LLGNGTTIIPTIPAIRIEPSFQSYSR---IFETMRLYKSCKQHSMHCTIIIS 119
L + R P R I + + + +S ++
Sbjct: 62 AATDLMSRWLTARQPDSAVTASHRPLPLAVLLGRGPQIAQATTAEAARQLNSNAVAVVYV 121
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF-SSSMIKNMQGKNIIL 178
G LL GV + + ++ + T++NA S + ++ G ++L
Sbjct: 122 SGHQPSTAQR--------LLRLGVPPERVAGDSCARTTWENATHTSLWLQRHYPGAAVLL 173
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ + L R+ F H G+ + P + LAL+E G L+
Sbjct: 174 ITDPWQLPRAARAFAHQGLTVWPLAVE---------PRLSARERNRLALRETAGTLLYAL 224
Query: 239 RG 240
+G
Sbjct: 225 QG 226
>gi|148252746|ref|YP_001237331.1| hypothetical protein BBta_1178 [Bradyrhizobium sp. BTAi1]
gi|146404919|gb|ABQ33425.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 221
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 71/222 (31%), Gaps = 37/222 (16%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ F L F + L L+ + +P + + IV+L G+
Sbjct: 4 RTFAGVVATLAIGFFVAAVGFIGFLSQLRGAEIKPE------RKADGIVVLTGGS----- 52
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
SR+ + + L + + + + + S+ +
Sbjct: 53 -------------SRVSDAVELLAGGYGRRLLISGVHPTNEASD--ITRSLPEARSFINC 97
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINT 199
V+ D +++T NA + K++I+V+S YH+ R+ + H ++
Sbjct: 98 CVDLD-----YSAINTRSNAAQTRRWAAERGFKSLIVVTSNYHMPRAIVELSHAMPSLDL 152
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI--AYYR 239
+ + P + L L EY + A R
Sbjct: 153 IPYAV--VGEKWRDEPWWTSGPTLRLLLSEYAKYVAAEARLR 192
>gi|326383401|ref|ZP_08205088.1| hypothetical protein SCNU_10711 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197807|gb|EGD54994.1| hypothetical protein SCNU_10711 [Gordonia neofelifaecis NRRL
B-59395]
Length = 223
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/197 (10%), Positives = 58/197 (29%), Gaps = 28/197 (14%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ L + + +++LG + +R+
Sbjct: 24 TLVAVASLWMVAGSRGRVADAADLPDDALRTMIVLGAKVE--------DGQVGDYVGARL 75
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ ++S +I G+ E V L G+ + + ++T
Sbjct: 76 DVAVAAFRSGHVER-----VIVSGNDADDAGNEVRVMRAYLEAQGIPASALVDDPLGVNT 130
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS--CSDYLNAYYSIIP 215
+ ++++ + ++V+ +H+ R+ + +GI D+ +
Sbjct: 131 NATCRRAATVYG---VTSAVIVTQDFHVARAVTLCRAWGIEAWGVIAPCDHCSL------ 181
Query: 216 LSANFYLTELALKEYIG 232
L L+E +
Sbjct: 182 ----LSLIRNQLREALA 194
>gi|315022247|gb|EFT35275.1| SanA protein [Riemerella anatipestifer RA-YM]
gi|325336625|gb|ADZ12899.1| Uncharacterized membrane protein [Riemerella anatipestifer RA-GD]
Length = 203
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 35/231 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
LL I+ I ++ M+L + + + + R + ++LG
Sbjct: 2 RLLKGIIKTILGLAELMVLAMMLANLWVYAL-------TNGRTYTKVSKIPAREVALVLG 54
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+ + R+ LY K II+SG + ++
Sbjct: 55 T------SPKMRSGIANPYFTKRMEAVSALYHYGKIK----KIIVSGEKSPYYDEPQA-- 102
Query: 134 YNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
N L+ G+ I + + T ++ + K + I++S +H R+
Sbjct: 103 MANYLIRTEGIPEGVIIQDPKGFSTKESIVRCKNNYKKNEV---IIISQGFHNLRALFIA 159
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI---LIAYYRG 240
++ +N A + + S +E++ + + G
Sbjct: 160 RNLNMNALAFGAQDVTKPESFYRNHT---------REFLARVQAVAYFILG 201
>gi|320539127|ref|ZP_08038798.1| putative conserved hypothetical protein [Serratia symbiotica str.
Tucson]
gi|320030765|gb|EFW12773.1| putative conserved hypothetical protein [Serratia symbiotica str.
Tucson]
Length = 247
Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 20/162 (12%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + GD + E +
Sbjct: 48 GMVLGTAKYYRTGVINQYYRYRIQRAINAYNSGKVQYLLLS-----GDNAQQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +GV DI L+ T + + + I+++ +H +R+ +
Sbjct: 103 RRDLIAAGVAPGDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIALY 159
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
GI + P + +E L A
Sbjct: 160 RGIQAQCYAV----------PSPKDMMTVRA--REIFARLAA 189
>gi|167626293|ref|YP_001676793.1| hypothetical protein Fphi_0073 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596294|gb|ABZ86292.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 357
Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 55/143 (38%), Gaps = 14/143 (9%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ ++ IV LG + R+ T+ +K
Sbjct: 175 SKLDQLKDVDQNSLAIVTLGYSLNDD-------GSMNNILVDRLKITLAAHKKYPNA--- 224
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--M 171
III G G+ ES L++ G+ I E QS +T NA + ++IK
Sbjct: 225 --IIIVSGGVAHEGVTESYQMKQWLIKHGISAQSIIQEDQSTNTVTNAINTINIIKKINR 282
Query: 172 QGKNIILVSSAYHLKRSQLYFQH 194
KNI+L+SS H++R+ F+
Sbjct: 283 PVKNILLISSDSHIRRANSIFEQ 305
>gi|189500318|ref|YP_001959788.1| hypothetical protein Cphamn1_1378 [Chlorobium phaeobacteroides BS1]
gi|189495759|gb|ACE04307.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides
BS1]
Length = 196
Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 61/183 (33%), Gaps = 23/183 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ ++I++LG R+ + L+ + ++ T I
Sbjct: 32 SYQSKPEKADVIIVLGG-----------------DDGPRVDKGGSLFNAGYAPNVVLTGI 74
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
D + + + +L E+GV + I ++T S T++ A S +M++ N I
Sbjct: 75 ----DSRYYRPSRPNWRERRLAEAGVPQTAINVDTTSETTWEEALNSVAMMQEKGWNNAI 130
Query: 178 LVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+VS H+ R ++ G + ++ N + E +
Sbjct: 131 VVSDPPHMLRLHSTWKRAFKGSSKSFILVATSPEWWKPHLWWQNETSYRFVISEIKKNIY 190
Query: 236 AYY 238
Sbjct: 191 YRV 193
>gi|152979392|ref|YP_001345021.1| hypothetical protein Asuc_1734 [Actinobacillus succinogenes 130Z]
gi|150841115|gb|ABR75086.1| protein of unknown function DUF218 [Actinobacillus succinogenes
130Z]
Length = 247
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 60/187 (32%), Gaps = 17/187 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
S++++ + + + ++ +++ P +LLG
Sbjct: 23 FSLQRLIGILAIGATLFIVLLTAVDQMIAYYVKD---AIYTDPSRLPYRPYGLLLGTAKY 79
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ P+ +RI L+K K + + GD + E
Sbjct: 80 VAK------GTPNVFYANRIQAADTLFKQGKIDYLLLS-----GDNRTLQYNEPRTMTRD 128
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L + G+ + + T + + + + + + +++ +H +R+ ++ I
Sbjct: 129 LRKLGIADQFLFSDYAGFRTLDSIIRAKEVFRA---EPMTIITQRFHCERALFIAKYHHI 185
Query: 198 NTKASCS 204
+ +
Sbjct: 186 DALCFVA 192
>gi|116512584|ref|YP_811491.1| hypothetical protein LACR_1892 [Lactococcus lactis subsp. cremoris
SK11]
gi|116108238|gb|ABJ73378.1| hypothetical protein LACR_1892 [Lactococcus lactis subsp. cremoris
SK11]
Length = 361
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 40/239 (16%), Positives = 84/239 (35%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY--QRPLL 58
+LL + L + S+ ++ ++ + + + ++ L +
Sbjct: 118 LLLPIVVLAFLLIDWVYLSMGRLPDSWIWLKILGIV-YPVLSIYLAWQFGIFFLSSWVYG 176
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
K+ V+LG G + + +RI ++ + + +
Sbjct: 177 RRVRKQRAAYHVVLGAGLIQGEHVGKL-------LGNRILAAVKAVRDNETI-----LFF 224
Query: 119 SGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SGG L+E +E G + LE QS T++N FSS +IK +
Sbjct: 225 SGGQGPDEKLSEVRAMQKYAVEVLGFPIERTMLEDQSRTTYENLVFSSRLIKEKF----M 280
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+S YH+ R+ L+ I+ + +A +Y ++E+I ++
Sbjct: 281 FFTSDYHVFRAALFAATLKIDAQG----------GKGGKTAMYYRVPAFIREFIAVMNY 329
>gi|304320133|ref|YP_003853776.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
gi|303299036|gb|ADM08635.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
Length = 194
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 71/225 (31%), Gaps = 41/225 (18%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R + ++ M L G+ + L + LS + +V+L G
Sbjct: 2 RFVLKIAALMGLLCAAGFFVFVAALPRSSNEQAALRSLSADAR---TGMVILTGG----- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ RI + L+ + + D + L
Sbjct: 54 ------------AGRRIQHGLDLFAQGYGDRVLISGTHPLVDKEDLEG---------LGV 92
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GIN 198
+ L ++ T NA + + I+LV+S +HL R+ L + +
Sbjct: 93 RDSLHCCVDLGPRARTTIGNALEARDWARRRGYDTILLVTSDFHLPRALLELEAVAPELT 152
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALK----EYIGILIAYYR 239
D +A SAN+ + A + EYI ++A+ R
Sbjct: 153 VIGIAVDTRSAP------SANWMRSPSAWRVLAEEYIKYILAWTR 191
>gi|313126704|ref|YP_004036974.1| hypothetical protein Hbor_19630 [Halogeometricum borinquense DSM
11551]
gi|312293069|gb|ADQ67529.1| uncharacterized conserved protein [Halogeometricum borinquense DSM
11551]
Length = 188
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKH-GLAESIVYNNKLLESGVERDDIKLETQ 153
R+ + + ++ SGG +H E V + GV+ D I L+
Sbjct: 17 ERLRARVNAGIRAFNATDASSLFFSGGQTNQHIDRTECGVMGEYAVRQGVDPDRIVLDPF 76
Query: 154 SLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQH-FGINT 199
+ DT NA F+ + N+ + LV+ +H R++ F FG +
Sbjct: 77 AHDTIGNAYFTRVLCDNLGLDIDELSLVTDDFHAPRAKYAFDQCFGADV 125
>gi|291080743|ref|ZP_06534716.2| hypothetical protein Salmonellaentericaenterica_06052 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 69
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 185 LKRSQLYFQHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R+ ++FQH G+N + ++ LN + IP ++ A E +G L +
Sbjct: 1 MPRAMIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWL 60
Query: 239 RG 240
+G
Sbjct: 61 KG 62
>gi|144898927|emb|CAM75791.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 202
Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 72/230 (31%), Gaps = 43/230 (18%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + R++ + ++ + + G L F + P + IV+L
Sbjct: 1 MRSRHPRRVHRLGAVLVALAALWSGGF-------LWFVDEVPRAVDDQTSHTDAIVVLTG 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G R+ + L ++ + + + G + +
Sbjct: 54 GR------------------ERLTTGLDLLEAGLSQRLFISGVY-KGVDLAEIIQLGRGH 94
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
++ + L + DT NA ++ +++ +V+ AYH+ R+ F+H
Sbjct: 95 AGL-------KEAVVLGYAADDTVGNAIETALWATEHNLRSLRIVTGAYHMPRALAEFRH 147
Query: 195 F--GINTKASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
I A + + P +A T EY L A R
Sbjct: 148 ALPEITLIAHPVFPDQVKSREWWRWPGTAALLAT-----EYSKYLAAIIR 192
>gi|209694358|ref|YP_002262286.1| hypothetical protein, putative phage gene [Aliivibrio salmonicida
LFI1238]
gi|208008309|emb|CAQ78460.1| putative exported protein, putative phage gene [Aliivibrio
salmonicida LFI1238]
Length = 337
Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR+ + L + + G +K+ + E+ + L + G+E + E++S
Sbjct: 133 SRLNQAYTLAIKYPNMPIILS-----GKGRKNNVIEADYMYDYLKDKGIETKRMYKESES 187
Query: 155 LDTFQNAQFSSSMIKNMQ----GKNIILVSSAYHLKRSQLYFQH 194
LDT NA+FS I+ KN +++++ YH RS F
Sbjct: 188 LDTVGNAEFSYFTIQENPSLNKIKNWLVITNNYHAMRSLFNFSR 231
>gi|148265185|ref|YP_001231891.1| hypothetical protein Gura_3157 [Geobacter uraniireducens Rf4]
gi|146398685|gb|ABQ27318.1| protein of unknown function DUF218 [Geobacter uraniireducens Rf4]
Length = 199
Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 34/213 (15%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK-DGNIIVLLGNGTTIIPTIPAIRIE 88
+I +++ L + S + + + IV+L G
Sbjct: 2 AFFRGIFSLLVISLVVIAVLFVDFTYKTFSLRQRDVKSDAIVVLAGGR------------ 49
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
RI E +RLY+ + I + + E + + +
Sbjct: 50 ------GRIEEGVRLYRENRA-RWLFLIGVDPAVRKGELFTERRGERS--------GEGV 94
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCSD 205
LE S +T +NA ++ MI +I L++S YH+KR+ L F+ I D
Sbjct: 95 FLENVSRNTLENALYAREMIVRHNVSSIKLITSRYHMKRATLIFRQVLPKDIAIYPHPVD 154
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
N +F L E+ +
Sbjct: 155 SKNLKEEWWSHGGSF---RLLFSEFYKYCLFRL 184
>gi|148927911|ref|ZP_01811320.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
gi|147886745|gb|EDK72306.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
Length = 207
Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 11/135 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT---IIISG 120
++IV+L + + R+ LY + K + + +I
Sbjct: 14 ASYDLIVVLAQKLHPG-------WKLAPDLQRRLDHARDLYLADKAPLIAVSGRWVITYE 66
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILV 179
+ E+ L+E GV + I E S DT NA F +++ G ++V
Sbjct: 67 AKGIVPPITEAECMKRYLIEQGVPANAILKEETSQDTIGNAYFIKQLVQERPGLRRLLIV 126
Query: 180 SSAYHLKRSQLYFQH 194
+ HL+R F H
Sbjct: 127 CATPHLRRVCYIFDH 141
>gi|90414649|ref|ZP_01222621.1| hypothetical protein P3TCK_09293 [Photobacterium profundum 3TCK]
gi|90324282|gb|EAS40854.1| hypothetical protein P3TCK_09293 [Photobacterium profundum 3TCK]
Length = 343
Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 56/165 (33%), Gaps = 12/165 (7%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+I + L + I+ LG +
Sbjct: 133 LLATLEVILNYPMDCLSRCSTSKKTMNKTAPSNYAIIALGYLLNDD-------GAIAPPL 185
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ T+ L + +II G K G ES L+E GV +D + E +
Sbjct: 186 LKRLTLTLSLANKYPKA-----LIIVTGGLAKAGQTESSAMKTWLVEQGVNKDRVIEENK 240
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ +T NA+ S +++ + LVS++ H+ RS + F
Sbjct: 241 ATNTIDNARLSLALLNKYNIQAATLVSASIHVHRSHILFDVLHWQ 285
>gi|241668733|ref|ZP_04756311.1| hypothetical protein FphipA2_08195 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254877264|ref|ZP_05249974.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254843285|gb|EET21699.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 357
Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 53/143 (37%), Gaps = 14/143 (9%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ ++ IV LG + R+ T+ +K
Sbjct: 175 SKLDQLKDVDQNSLAIVTLGYSLNDD-------GSMNNILVDRLKITLAAHKKYPNA--- 224
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--M 171
III G G+ ES L++ + I E QS T NA + ++IK
Sbjct: 225 --IIIVLGGVAHEGVTESYQMKQWLIKHDIAAQSIIQEDQSTSTVTNAINTINIIKKINR 282
Query: 172 QGKNIILVSSAYHLKRSQLYFQH 194
KNI+L+SS H++R+ F+
Sbjct: 283 PVKNILLISSDSHIRRANSIFEQ 305
>gi|227827121|ref|YP_002828900.1| hypothetical protein M1425_0793 [Sulfolobus islandicus M.14.25]
gi|229584289|ref|YP_002842790.1| hypothetical protein M1627_0798 [Sulfolobus islandicus M.16.27]
gi|227458916|gb|ACP37602.1| protein of unknown function DUF218 [Sulfolobus islandicus M.14.25]
gi|228019338|gb|ACP54745.1| protein of unknown function DUF218 [Sulfolobus islandicus M.16.27]
Length = 180
Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 30/142 (21%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ IV+LG G S RI E +RLYK +
Sbjct: 2 YDAIVVLGGGK---------------LSEGRIDEAIRLYKQGIAKYLIIVG--------- 37
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
G E K+ +++ ++ SL T NA ++ +I+ + K+I++V+S +H+
Sbjct: 38 -GKEEVSEMYKKVRSKIQNIENVYVDNNSLSTADNAYYAKKIIEKLNIKSILIVTSNFHI 96
Query: 186 KRSQLYFQ-----HFGINTKAS 202
KR+ F+ + I+
Sbjct: 97 KRALKTFELFLRGKYKIDIIGV 118
>gi|329113437|ref|ZP_08242218.1| Hypothetical protein APO_0206 [Acetobacter pomorum DM001]
gi|326697262|gb|EGE48922.1| Hypothetical protein APO_0206 [Acetobacter pomorum DM001]
Length = 171
Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+++ G PS +R+ + + + I G ++G
Sbjct: 6 VIIFGAALNPD-------GSPSVALLNRVHSALMF-----GAAHGPVMYIPTGGVPQNGQ 53
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHL 185
E+ V LL++G+ I E + DTF +A + +++ + I +VSS HL
Sbjct: 54 TEADVMAACLLKAGIAPKCILPEPTAGDTFDSAVACTHLLRRAGYLTAQPIAVVSSPLHL 113
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
R L + G + +L A +P E + +
Sbjct: 114 PRCVLLMRLAGWKVQPVP--FLRAQPH-VPNMR--KKLLRIAHECLALPWDAL 161
>gi|66803372|ref|XP_635529.1| hypothetical protein DDB_G0290785 [Dictyostelium discoideum AX4]
gi|60463854|gb|EAL62026.1| hypothetical protein DDB_G0290785 [Dictyostelium discoideum AX4]
Length = 516
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 14/133 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC--KQHSMHCTIIISGGDPQK 125
IV+LG P+ R+ Y + I+ G ++
Sbjct: 101 AIVVLGYSLHSD-------GMPTQILKERVVLACEYYTKLNDVEGGKTKLILSGKGKEEQ 153
Query: 126 HGL-----AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+E+ N L++ V DI +E S +T +NA+F+ + ++ + + + +V+
Sbjct: 154 SDPDKAFNSEAEAMNEIALQNDVSPFDILIENNSSNTAENARFTLNYLQKIGVQRLFIVT 213
Query: 181 SAYHLKRSQLYFQ 193
S +H+ RSQ FQ
Sbjct: 214 SDFHVLRSQYIFQ 226
>gi|327484303|gb|AEA78710.1| hypothetical protein VCLMA_A1486 [Vibrio cholerae LMA3894-4]
Length = 205
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 2/122 (1%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P + + + +LY + + +E+ +
Sbjct: 18 LHQQPDVADLILVLGSNDVRVAEHAAKLYHQGLAPYVLFSGGFGRFTQGVFNHSEAETFA 77
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSM--IKNMQGKNIILVSSAYHLKRSQLYFQ 193
++GV I LETQS ++ +N FS + + K I+LV Y +R+ F+
Sbjct: 78 AIAKDAGVPEHAILLETQSTNSGENLHFSHQLLVQQVRPAKRILLVQKPYMERRAYATFK 137
Query: 194 HF 195
Sbjct: 138 QQ 139
>gi|197119576|ref|YP_002140003.1| hypothetical protein Gbem_3208 [Geobacter bemidjiensis Bem]
gi|197088936|gb|ACH40207.1| YdcF-like protein of unknown function DUF218 [Geobacter
bemidjiensis Bem]
Length = 196
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 68/197 (34%), Gaps = 35/197 (17%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK-DGNIIVLLGNGTTIIPTIPAIRIE 88
LL ++ I+L L + S + + IV+L G
Sbjct: 2 ALLKGLFSLMVLILIVLSVLFVDFVYKTFSLSQRDVHADAIVVLTGGR------------ 49
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
R+ E ++LY++ Q + I + + + N L +
Sbjct: 50 ------GRVEEGVKLYRAG-QGKLLFLIGVDPLVKKHELYQGAGAENVYLEK-------- 94
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCSD 205
S +T +NA ++ MI + +I L++S YH+KRS + F++ + D
Sbjct: 95 ----TSRNTLENAIYARDMIMKHKVSSIKLITSRYHMKRSTILFRNAFPKDVAIYPHPVD 150
Query: 206 YLNAYYSIIPLSANFYL 222
N +F L
Sbjct: 151 SSNLKEEWWNHKGSFKL 167
>gi|300772477|ref|ZP_07082347.1| LexA repressor [Sphingobacterium spiritivorum ATCC 33861]
gi|300760780|gb|EFK57606.1| LexA repressor [Sphingobacterium spiritivorum ATCC 33861]
Length = 112
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ I S +T ++ + S + + +++++S +H++R+ + ++
Sbjct: 11 RKYLVNKGIPDTAILDGPLSTNTVEDFKLSKELTSQLNPDILVVITSDFHMQRAGILYRR 70
Query: 195 F--GINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
F G + + +IPL + L E
Sbjct: 71 FTDGSKVLFMPAPSSLSEEELIPLIEHETRAVKKLHE 107
>gi|148262062|ref|YP_001236189.1| hypothetical protein Acry_3082 [Acidiphilium cryptum JF-5]
gi|146403743|gb|ABQ32270.1| protein of unknown function DUF218 [Acidiphilium cryptum JF-5]
Length = 218
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 53/165 (32%), Gaps = 14/165 (8%)
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P A I R+ + L + + + +G
Sbjct: 55 NPMPHAGGIVVLTGGADRVKAGLELLMAGAAPRLLISG-------AGNGTYLGDFTARDG 107
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--G 196
+++ + DI + + T NA+ +++ ++++V++ YH+ R+ L G
Sbjct: 108 IDANAKATDITVGHAAATTRGNARETAAWASRHHIGSLVVVTADYHMPRALLELHRALPG 167
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ P ++ ++ + E+ ++ R
Sbjct: 168 VTLIPEPVRPPAMTNPGQP-----HMLKILVTEFCKYIVVRLRLG 207
>gi|56750108|ref|YP_170809.1| hypothetical protein syc0099_d [Synechococcus elongatus PCC 6301]
gi|56685067|dbj|BAD78289.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 188
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 50/148 (33%), Gaps = 15/148 (10%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+ G + I R L ++ I +S G +
Sbjct: 15 VVWGLNRVAVAQRSPQAIFVLGGDPQREQFAAELAQTHP----DLPIWVSSG-------S 63
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
++GV R + L+ Q+ DT N + + +++ LV+S YH++R+
Sbjct: 64 NPEYAEWVFGQAGVPRSRLHLDYQATDTLSNFTSLADRFQQQGIQHVYLVTSDYHMRRAL 123
Query: 190 LY----FQHFGINTKASCSDYLNAYYSI 213
+ F GI + + A S
Sbjct: 124 VIANIVFASRGITFEPVPVPFDRASESW 151
>gi|326405574|ref|YP_004285656.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
gi|325052436|dbj|BAJ82774.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
Length = 218
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 53/165 (32%), Gaps = 14/165 (8%)
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P A I R+ + L + + + +G
Sbjct: 55 NPMPHAGGIVVLTGGADRVKAGLELLMAGAAPRLLISG-------AGNGTYLGDFTARDG 107
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--G 196
+++ + DI + + T NA+ +++ ++++V++ YH+ R+ L G
Sbjct: 108 IDANAKATDITVGHAAATTRGNARETAAWASRHHIGSLVVVTADYHMPRALLELHRALPG 167
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ P ++ ++ + E+ ++ R
Sbjct: 168 VTLIPEPVRPPAMTNPGQP-----HMLKILVTEFCKYIVVRLRLG 207
>gi|229529274|ref|ZP_04418664.1| hypothetical protein VCG_002367 [Vibrio cholerae 12129(1)]
gi|229333048|gb|EEN98534.1| hypothetical protein VCG_002367 [Vibrio cholerae 12129(1)]
Length = 215
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 2/122 (1%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P + + + +LY + + +E+ +
Sbjct: 18 LHQQPDVADLILVLGSNDVRVAEHAAKLYHQGLAPYVLFSGGFGRFTQGVFNHSEAETFA 77
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSM--IKNMQGKNIILVSSAYHLKRSQLYFQ 193
++GV I LETQS ++ +N FS + + K I+LV Y +R+ F+
Sbjct: 78 AIAKDAGVPEHAILLETQSTNSGENLHFSHQLLVQQVRPAKRILLVQKPYMERRAYATFK 137
Query: 194 HF 195
Sbjct: 138 QQ 139
>gi|322382281|ref|ZP_08056191.1| hypothetical protein PL1_3077 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153783|gb|EFX46154.1| hypothetical protein PL1_3077 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 195
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 23/147 (15%)
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGD-PQKHGLAESIVYNNKLLESGVERDDIK 149
R+ + + LYK + I+ SGG+ + E++V + G+ DI
Sbjct: 36 RSLAYRVPKAIELYKQGRAG----KILFSGGNQWEGQEDVEALVMKQGAINEGIPETDII 91
Query: 150 LETQSLDTFQNAQFS----SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG---INTKAS 202
E +S T +N S + + K I++V++A+H++R L + + I
Sbjct: 92 TEIRSTSTRENVLSSLLELDRAMGLHRLKRILIVTTAFHMRRCYLNMRTYMPEWIEYSLC 151
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKE 229
D L E
Sbjct: 152 PVDDRKTRED-----------NWFLHE 167
>gi|312116073|ref|YP_004013669.1| hypothetical protein Rvan_3387 [Rhodomicrobium vannielii ATCC
17100]
gi|311221202|gb|ADP72570.1| protein of unknown function DUF218 [Rhodomicrobium vannielii ATCC
17100]
Length = 197
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 56/186 (30%), Gaps = 31/186 (16%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y ++ KD + IV L RI +RL K +
Sbjct: 9 YSVSIMPSTRLKDADAIVALTG------------------DEERIAAAVRLLSEGKARRL 50
Query: 113 HCTII--ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ + + + L V+ D + +T NA +++ ++
Sbjct: 51 LISGVHKTTRAPQIMSLTTSRGSRSWSLFSCCVDLD------NAHNTEANAAETTNWVRK 104
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
++II+V+S YH+ R+ + + S + K
Sbjct: 105 RGYRSIIVVTSTYHMPRALIELHQAMRDVELVPYPVRAPRLDERWWRDSR---TAWVLWK 161
Query: 229 EYIGIL 234
EY+ +
Sbjct: 162 EYMKYI 167
>gi|253699685|ref|YP_003020874.1| hypothetical protein GM21_1055 [Geobacter sp. M21]
gi|251774535|gb|ACT17116.1| protein of unknown function DUF218 [Geobacter sp. M21]
Length = 195
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 71/213 (33%), Gaps = 38/213 (17%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK-DGNIIVLLGNGTTIIPTIPAIRIE 88
LL ++ I+L L + S + + IV+L G
Sbjct: 2 ALLKVLFSLIVLILIVLSVLFVDFVYKTFSLSQRDVKTDAIVVLTGGR------------ 49
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
R+ E ++LY+ + + I + + + N L +
Sbjct: 50 ------GRVEEGVKLYRGGRGKLLFL-IGVDPLVKKHELYRGAGAENVYLEK-------- 94
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCSD 205
S +T +NA ++ MI + +I L++S YH+KRS + F++ I D
Sbjct: 95 ----TSRNTLENAIYARDMITKHRVSSIKLITSRYHMKRSTILFRNALPKDIAIYPHPVD 150
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
N +F +L E+ I
Sbjct: 151 SSNLKEEWWNHKGSF---KLLFSEFYKYCILRL 180
>gi|332715738|ref|YP_004443204.1| hypothetical protein AGROH133_10165 [Agrobacterium sp. H13-3]
gi|325062423|gb|ADY66113.1| hypothetical protein AGROH133_10165 [Agrobacterium sp. H13-3]
Length = 232
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 44/223 (19%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
I + G ++ L ++ ++IV+LG
Sbjct: 36 KRNAILLGLMMLTAIGLYGLALVSAGSLLVVE----------DPPAQADVIVVLGG---- 81
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
R + +L+ + ++ GD + L
Sbjct: 82 -------------DGPPRAAQAAKLWHEGRAP---LVLVTGYGDCD--------FIRDML 117
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG-- 196
+ GV+ + E SL T++NA F+ ++ M K+ ILV+S +H +R+ F+
Sbjct: 118 VRLGVDSAVVSTECLSLSTWENATFAQPILTGMGAKSAILVTSWFHSRRAVKRFRFVMPQ 177
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
I + + + + + KEY L+ R
Sbjct: 178 IEWISLPAQRTVSLWRLAIDGDGVQ----VFKEYAKALLYDIR 216
>gi|301156100|emb|CBW15571.1| predicted protein [Haemophilus parainfluenzae T3T1]
Length = 227
Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 54/184 (29%), Gaps = 26/184 (14%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
R + + ++LG + + R+ + L K +
Sbjct: 48 RVYEDVETLPHRHYALVLGTSKYVAKGKTNKYYDY------RLEASKYLIDQNKVDYLLL 101
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ GD + E L GV + + T + ++ + +
Sbjct: 102 S-----GDNRTLQYNEPRTMFLDLRRMGVSESVMFKDFAGFRTLDSVVRANKVFQ---VP 153
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ ++S +H +R+ L +H+ I+ + Y+ ++E +
Sbjct: 154 SFTIISQKFHCERALLIAKHYDIDAICFTAKQPEVYFGTR------------VREMFARV 201
Query: 235 IAYY 238
A
Sbjct: 202 KAVL 205
>gi|152992056|ref|YP_001357777.1| vancomycin resistance protein [Sulfurovum sp. NBC37-1]
gi|151423917|dbj|BAF71420.1| vancomycin resistance protein [Sulfurovum sp. NBC37-1]
Length = 215
Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 53/165 (32%), Gaps = 17/165 (10%)
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+ ++ ++ RI L+K+ K + I+ G E+
Sbjct: 46 AALLLGTNKYIVKGRKNYYYLYRIRAAEALWKAGKVQA-----IVVSGTNDSRYYNETRS 100
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+++GV I + T + + ++ K I++S +HL+R+ +
Sbjct: 101 MYKDLIKAGVPPKYISQDFAGFRTLDSVMRAEAIFD---LKEYIIISQKFHLERAIFIAR 157
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G + + Y + +E + A+
Sbjct: 158 AKGQKVIGFEAKTKEG-------TKAAYKMKA--RELLARTKAFL 193
>gi|33152395|ref|NP_873748.1| SanA protein [Haemophilus ducreyi 35000HP]
gi|33148618|gb|AAP96137.1| SanA protein [Haemophilus ducreyi 35000HP]
Length = 230
Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 46/126 (36%), Gaps = 18/126 (14%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++ GD Q E V N L+ GV ++ + T + + + +
Sbjct: 99 LLVSGDNQTVYYNEPKVMRNDLVNMGVPASQVEQDFAGFRTLDSIIRAKQVYQ---LAPF 155
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGI 233
++VS +H +R+ +++ I+ + Y ++ ++E+ +G+
Sbjct: 156 VIVSQRFHCERALFIAKYYDIDAVCFAAKYPAG------------HIQVRVREFFARLGM 203
Query: 234 LIAYYR 239
L
Sbjct: 204 LWDLLM 209
>gi|83594586|ref|YP_428338.1| hypothetical protein Rru_A3256 [Rhodospirillum rubrum ATCC 11170]
gi|83577500|gb|ABC24051.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 226
Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 71/230 (30%), Gaps = 46/230 (20%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + R++ ++ G + + +L P + + IV+L G
Sbjct: 1 MGKVARRLGLLALTAFGLWLAGLALFASTVL---------PSAIEDDQTTTDAIVVLTGG 51
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ R+ + L + + + A V
Sbjct: 52 S------------------ERLPVGLDLLARGLGRKLFLSGVGVEVTLDDLRAAIVDVPE 93
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N R + L +LDT NA+ ++ + ++ LV++AYH+ RS + F+
Sbjct: 94 NL-------RSRVVLGHAALDTVGNAEETAHWLATEHFTSLRLVTAAYHMPRSLVEFRAA 146
Query: 196 --GINTKASCSD----YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ A ++ + EY L+A+ R
Sbjct: 147 MPDVRIIAHPVFPGSVKQQEWWMWKGTARLMAE------EYSKFLVAWLR 190
>gi|255513632|gb|EET89897.1| protein of unknown function DUF218 [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 295
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + L K + ++ + S +K L ES + G + E +S+D
Sbjct: 97 VEHAVLLLKEGRAKAILFSGGWSFKHRRKPRLTESEGMRRYAVSLGAPASALITEKRSMD 156
Query: 157 TFQNAQFSSSMIKNMQGKNIIL-VSSAYHLKRSQLYFQHF 195
T NA +SS +I+ M+G IL V+ AYH+ R+ F+
Sbjct: 157 TIGNALYSSKIIRKMRGTKRILLVAVAYHMPRASYIFRKA 196
>gi|2570211|emb|CAA05289.1| Sfi protein [Salmonella typhimurium]
Length = 187
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 14/166 (8%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Q + V+LG + RI + Y S K
Sbjct: 29 WKTAPYIYDELQDLPYRQVGVVLGTAKYYRKGVINQYYRY------RIQGALNAYNSGKV 82
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ + + GD E I L+ +GV+ DI L+ T + + +
Sbjct: 83 NYLLLS-----GDNALQSYYEPITMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD 137
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
I+++ +H +R+ H GI + + Y P
Sbjct: 138 TNDF---IIITQRFHCERALFIALHMGIQAQCYRGTFTQKYADSAP 180
>gi|313679730|ref|YP_004057469.1| hypothetical protein Ocepr_0839 [Oceanithermus profundus DSM 14977]
gi|313152445|gb|ADR36296.1| protein of unknown function DUF218 [Oceanithermus profundus DSM
14977]
Length = 172
Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 15/126 (11%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P+ + ++LG PS +R+ + LY+S + I++
Sbjct: 17 VPEAAAEPRQALVLGAAQY--------DGVPSPVFRARLDAALELYRSGRA----ARIVV 64
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG +E L GV + ET+S T++N + +++ + +
Sbjct: 65 SGGRAPGDRFSEGASGCRYLEARGVPAAALACETESHSTWENLVRARPLLEP---GPVWI 121
Query: 179 VSSAYH 184
V+ H
Sbjct: 122 VTDEPH 127
>gi|313205935|ref|YP_004045112.1| hypothetical protein Riean_0437 [Riemerella anatipestifer DSM
15868]
gi|312445251|gb|ADQ81606.1| protein of unknown function DUF218 [Riemerella anatipestifer DSM
15868]
Length = 190
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 62/201 (30%), Gaps = 22/201 (10%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+L L + L + + + I + + + R+ L
Sbjct: 6 VLAMMLANLWVYALTNGRTYTKVSKIPAREVALVLGTSPKMRSGIANPYFTKRMEAVSAL 65
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQ 162
Y K II+SG + ++ N L+ G+ I + + T ++
Sbjct: 66 YHYGKIK----KIIVSGEKSPYYDEPQA--MANYLIRTEGIPEGVIIQDPKGFSTKESIV 119
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL 222
+ K + I++S +H R+ ++ +N A + + S
Sbjct: 120 RCKNNYKKNEV---IIISQGFHNLRALFIARNLNMNALAFGAQDVTKPESFYRNHT---- 172
Query: 223 TELALKEYIGI---LIAYYRG 240
+E++ + + G
Sbjct: 173 -----REFLARVQAVAYFILG 188
>gi|54302701|ref|YP_132694.1| hypothetical protein PBPRB1022 [Photobacterium profundum SS9]
gi|46916125|emb|CAG22894.1| hypothetical protein PBPRB1022 [Photobacterium profundum SS9]
Length = 358
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 12/165 (7%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+I + + L + + I+ LG +I
Sbjct: 148 LLATLEVILSYPMDCLSRYAASKKAIDKMAYSNHAIIALGYLLNDDGSIATP-------L 200
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ T+ L + +II G K G ES L+E G+ D I E +
Sbjct: 201 LKRLTLTLSLANKYPKA-----LIIVTGGLAKAGRTESSAMKAWLVEQGISEDRIIEENK 255
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ +T NA+ S +++ + LVS++ H+ RS + F
Sbjct: 256 ATNTIDNARLSLALLAKYNIQTATLVSASIHVHRSHILFDILHWQ 300
>gi|25027301|ref|NP_737355.1| hypothetical protein CE0745 [Corynebacterium efficiens YS-314]
gi|23492582|dbj|BAC17555.1| hypothetical protein [Corynebacterium efficiens YS-314]
Length = 143
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 15/144 (10%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ + SR+ L + ++ G E+ + L + GV
Sbjct: 7 VNGHVNALLASRLDRAAELAGA---SGAVAVVVSGRG--------EAAAMADYLRDLGV- 54
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I E + T +N + + +++ + + +V+S +H R+ L+ H GI +
Sbjct: 55 -ETIIEEPHATSTNENLENAHALLPD--TRRWTVVTSDFHAWRTYLWAWHLGIPITVVTA 111
Query: 205 DYLNAYYSIIPLSANFYLTELALK 228
+ + + L L AL+
Sbjct: 112 PTPLSVRTQMFLRECLALPHSALR 135
>gi|259506560|ref|ZP_05749462.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165980|gb|EEW50534.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 148
Score = 44.0 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 15/144 (10%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ + SR+ L + ++ G E+ + L + GV
Sbjct: 12 VNGHVNALLASRLDRAAELAGA---SGAVAVVVSGRG--------EAAAMADYLRDLGV- 59
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I E + T +N + + +++ + + +V+S +H R+ L+ H GI +
Sbjct: 60 -ETIIEEPHATSTNENLENAHALLPD--TRRWTVVTSDFHAWRTYLWAWHLGIPITVVTA 116
Query: 205 DYLNAYYSIIPLSANFYLTELALK 228
+ + + L L AL+
Sbjct: 117 PTPLSVRTQMFLRECLALPHSALR 140
>gi|241668732|ref|ZP_04756310.1| hypothetical protein FphipA2_08190 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 352
Score = 44.0 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+IV+LG+ + + R+++ + Y + TII+SGG G
Sbjct: 182 VIVILGSPLNSNAS-------MNEYLIKRLYKGLEAYFRFPE----ATIIVSGGRV-TAG 229
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL--VSSAYHL 185
ES L+ S V I LE QS + + IKNM K + V+S +
Sbjct: 230 KTESYQMRQWLVNSSVPLKKIILEDQSFNMVWQGVNTFMTIKNMNPKPTDIILVTSTADI 289
Query: 186 KRSQLYFQHFGIN 198
+R+ F+ +
Sbjct: 290 RRANAIFKQEAFD 302
>gi|300857915|ref|YP_003782898.1| hypothetical protein cpfrc_00498 [Corynebacterium
pseudotuberculosis FRC41]
gi|300685369|gb|ADK28291.1| hypothetical protein cpfrc_00498 [Corynebacterium
pseudotuberculosis FRC41]
gi|302205641|gb|ADL09983.1| Hypothetical protein CpC231_0496 [Corynebacterium
pseudotuberculosis C231]
gi|302330192|gb|ADL20386.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
1002]
gi|308275876|gb|ADO25775.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
I19]
Length = 155
Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 25/146 (17%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EP R+ + L + + G G E+ V + L+ G++
Sbjct: 22 EPGHVLLWRLQHALELSQQ------------TSGPVVVSGKGEAAVMGDWLVRHGLDPHR 69
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+ +E ++ T +N + + +++ I+V+S +H R+ + +H GI S +
Sbjct: 70 LIIEPEATSTNENLENAHALLPETH--TWIVVTSDFHKLRTLAWARHLGIPITVSSAVTK 127
Query: 208 NAYYSIIPLSANFYLTELALKEYIGI 233
+ ++E +
Sbjct: 128 PPF-----------RVRNFVREIFAL 142
>gi|313885551|ref|ZP_07819301.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8]
gi|312619281|gb|EFR30720.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8]
Length = 339
Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 90/236 (38%), Gaps = 27/236 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLLS + + + Q IR ++ + + + + LL + + +
Sbjct: 102 MLLSAAIIFMVWGAFNLQEIRFENYIDMVIEITLYFIANFLAFCLLNWVLQVFPLKV--- 158
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-CTIIIS 119
G ++++LG P + R+ + + Y + + +++
Sbjct: 159 ----KGQVLMVLGQKIDNPQQFPRL-------LARRLDQALAYYIAQPLSDQNKIYFLVT 207
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIIL 178
GG +E+ + L+E GV D I LE + +TFQN + + + ++ +I+
Sbjct: 208 GGPIAWGDTSEAAEMRDYLIERGVAGDKIILEPLAHNTFQNFYYGRELLVGPLKAAPVIV 267
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S +H+ RS Y Q G+ Y + + +++Y+G L
Sbjct: 268 FTSRFHVLRSYCYGQASGMKAT-----YRGTRVAW------YLWPYYLIRDYLGFL 312
>gi|226355611|ref|YP_002785351.1| hypothetical protein Deide_07400 [Deinococcus deserti VCD115]
gi|226317601|gb|ACO45597.1| Conserved hypothetical protein, precursor [Deinococcus deserti
VCD115]
Length = 190
Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 72/221 (32%), Gaps = 33/221 (14%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ + +L I +L L +P+ +V+LG
Sbjct: 2 RARGSTLSLLPVMIIAVLAASFVLSSGL--------RAPRAVTPHPTLVVLGAA------ 47
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS R+ +RLY++ I+++GG +E V L
Sbjct: 48 --QYAGRPSPAFERRLIHALRLYRAG----GVERIVVTGGRRPGDPYSEGEVGVTFLAFH 101
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + ET+S T +N + + + + LV+ H R+ + G++
Sbjct: 102 GVPAQALLAETRSRTTIENLRNARTSLPPQTPV--TLVTDEAHTPRALALARALGLD--- 156
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
++ + P L+E + ++ G R
Sbjct: 157 --ANANASPLGARPDLRYL------LREKLALVAYALIGIR 189
>gi|218437925|ref|YP_002376254.1| hypothetical protein PCC7424_0930 [Cyanothece sp. PCC 7424]
gi|218170653|gb|ACK69386.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 230
Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 72/234 (30%), Gaps = 57/234 (24%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L + + ++ + F+ I + L K + I++LG
Sbjct: 11 RLARKKRHRAVKLALLAGVGLFVLNLIFNIGIKLPL-----------NTSKPADAILVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
R + RL K IIIS G +E
Sbjct: 60 GSIQ------------------REIDAARLGKYYP----DIPIIISSG-------SEEPC 90
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ ++ D I LE + TF N +S +++ +I+++S HL R++ Q
Sbjct: 91 MLLIFQKFQLKLDRIWLEKCADSTFGNFFYSVPILQGWGVHKVIVITSPSHLPRAKWLAQ 150
Query: 194 -HFGINTK----------ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
H G +Y + + + +S +F +G I
Sbjct: 151 IHLGAKGIASDIVVTQEQGFSGNYESGLITFLDVSRSFLWA------IVGQFIY 198
>gi|315221559|ref|ZP_07863479.1| conserved hypothetical protein [Streptococcus anginosus F0211]
gi|315189393|gb|EFU23088.1| conserved hypothetical protein [Streptococcus anginosus F0211]
Length = 218
Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
L+ K + C+ E+ Y +E+GV +D I +E +S ++
Sbjct: 40 NHAASLFLQGKAPFLVCSGGYGKITKSLWNNTEAETYAQICIENGVPKDKILIENKSTNS 99
Query: 158 FQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
+N F+ ++++ K +V Y +R+ +
Sbjct: 100 GENFNFTKKLLESRNIKVSTGTIVCKNYLSRRALATAKKQ 139
>gi|209515748|ref|ZP_03264611.1| GCN5-related N-acetyltransferase [Burkholderia sp. H160]
gi|209503775|gb|EEA03768.1| GCN5-related N-acetyltransferase [Burkholderia sp. H160]
Length = 358
Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 51/134 (38%), Gaps = 12/134 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + ++L + + + ++ +R+ + LY++ + +
Sbjct: 4 ADEAQFDAAIVL-------ANQMDAQGQINDETRARMDCAVALYQA---RRVALVVTSGW 53
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSS-SMIKNMQGKNIIL 178
++ + +E ++ + + + + DT +A F+ + ++ +++
Sbjct: 54 AYRNDTAISLAEAMRRYAIEAHDLDGNVVVAQNSARDTVGDAVFTKLRLALPLRWSRVMV 113
Query: 179 VSSAYHLKRSQLYF 192
V+S YH R+ F
Sbjct: 114 VTSTYHGARALEIF 127
>gi|307353054|ref|YP_003894105.1| hypothetical protein Mpet_0899 [Methanoplanus petrolearius DSM
11571]
gi|307156287|gb|ADN35667.1| protein of unknown function DUF218 [Methanoplanus petrolearius DSM
11571]
Length = 182
Score = 43.6 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + +I++LGN ++ R+ +++++ ++ G
Sbjct: 3 PKDETTVIIILGNRLQSKQIHQELKG--------RMDCGLKVFRE----EGGILLLSGGR 50
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-S 180
+ + E + + + GV+ +I E SLDT NA FS ++ + + I V +
Sbjct: 51 SNPEIDVPECGIMKDYAVGRGVDPSNIITEDSSLDTIGNAVFSREIVDKLDAVSKIFVIT 110
Query: 181 SAYHLKRSQLYF 192
S YH++RS+ F
Sbjct: 111 SCYHVERSRYLF 122
>gi|167626292|ref|YP_001676792.1| hypothetical protein Fphi_0071 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596293|gb|ABZ86291.1| hypothetical protein Fphi_0071 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 377
Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+IV+LG+ + + R+++ + Y + TII+SGG G
Sbjct: 207 VIVILGSPLNSNAS-------MNEYLIKRLYKGLEAYFRFPE----ATIIVSGGRV-TAG 254
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL--VSSAYHL 185
ES L+ S V I LE QS + + IKNM K + V+S +
Sbjct: 255 KTESYQMRQWLVNSSVPLKKIILEDQSFNMVWQGVNTFMTIKNMNPKPTDIILVTSTADI 314
Query: 186 KRSQLYFQHFGIN 198
+R+ F+ +
Sbjct: 315 RRANAIFKQEAFD 327
>gi|204927133|ref|ZP_03218335.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204323798|gb|EDZ08993.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 134
Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 52/152 (34%), Gaps = 19/152 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 2 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 54 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
G+ I +E +S T +N +++ +++
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQH 134
>gi|311064772|ref|YP_003971497.1| hypothetical protein BBPR_1421 [Bifidobacterium bifidum PRL2010]
gi|310867091|gb|ADP36460.1| Conserved hypothetical membrane protein [Bifidobacterium bifidum
PRL2010]
Length = 93
Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 12/92 (13%)
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+ +GG ++E+ L E V D + +E +S T +N +FS ++ G
Sbjct: 1 MFVAAGGQGSDEVVSEAESMRRYLTESRHVPADAVLMEDRSTTTMENLRFSKEIMDARSG 60
Query: 174 -----------KNIILVSSAYHLKRSQLYFQH 194
LV+S YH+ R+ Y
Sbjct: 61 VQSVPGRRGLAYRCALVTSDYHVFRASEYAHQ 92
>gi|81300267|ref|YP_400475.1| hypothetical protein Synpcc7942_1458 [Synechococcus elongatus PCC
7942]
gi|81169148|gb|ABB57488.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 188
Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 49/148 (33%), Gaps = 15/148 (10%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+ G + I R L ++ I +S G +
Sbjct: 15 VVWGLNRVAVAQRSPQAIFVLGGDPQREQFAAELAQTHP----DLPIWVSSG-------S 63
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
++GV R + L+ Q+ DT N + + +++ LV+S YH++R+
Sbjct: 64 NPEYAEWVFSQAGVPRSRLHLDYQATDTLSNFTSLADRFQQQGIQHVYLVTSDYHMRRAL 123
Query: 190 LY----FQHFGINTKASCSDYLNAYYSI 213
+ F GI + A S
Sbjct: 124 VIANIVFASRGITFEPVPVPSDRASESW 151
>gi|291084551|ref|ZP_06538762.2| hypothetical protein Salmonellaentericaenterica_28467 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 165
Score = 43.2 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 52/152 (34%), Gaps = 19/152 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 33 KYRYILRIAAGIILIMAMVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 85 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 133
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
G+ I +E +S T +N +++ +++
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILRQQH 165
>gi|254877263|ref|ZP_05249973.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254843284|gb|EET21698.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 377
Score = 43.2 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+IV+LG+ + + R+++ + Y + TII+SGG G
Sbjct: 207 VIVILGSPLNSNAS-------MNEYLIKRLYKGLEAYFRFPE----ATIIVSGGRV-TAG 254
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL--VSSAYHL 185
ES L+ S V I LE QS + + IKNM K + V+S +
Sbjct: 255 KTESYQMRQWLVNSSVPLKKIILEDQSFNMVWQGVNTFMTIKNMNPKPTDIILVTSTADI 314
Query: 186 KRSQLYFQHFGIN 198
+R+ F+ +
Sbjct: 315 RRANAIFKQEAFD 327
>gi|320335290|ref|YP_004172001.1| hypothetical protein Deima_2706 [Deinococcus maricopensis DSM
21211]
gi|319756579|gb|ADV68336.1| protein of unknown function DUF218 [Deinococcus maricopensis DSM
21211]
Length = 193
Score = 43.2 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 12/110 (10%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
Q ++ +++LG +PS +R+ +RLY++ I+
Sbjct: 31 PVQQPERPAPTLLVLGAA--------QYNGQPSPAFRARLDHALRLYRAG----GVTRIV 78
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+SGG +E V L GV + ET + T QN + S ++
Sbjct: 79 VSGGTGPGDRYSEGAVGAAYLRAHGVPASALAAETHARSTLQNLRLSRAL 128
>gi|148657753|ref|YP_001277958.1| hypothetical protein RoseRS_3653 [Roseiflexus sp. RS-1]
gi|148569863|gb|ABQ92008.1| protein of unknown function DUF218 [Roseiflexus sp. RS-1]
Length = 191
Score = 43.2 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 24/181 (13%), Positives = 53/181 (29%), Gaps = 26/181 (14%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G + R + LY+ + T + GG
Sbjct: 29 PAHADAIVVLGGGFPL-----------------RDQHAIDLYREGWAREIWRTGDLPGGS 71
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
L+ GV + + + T+ + + + M + + +++V+
Sbjct: 72 ------VVLQKARRLALQQGVP-ETAFVPVATDSTWADGREIARMAQERHAQRLLIVTEW 124
Query: 183 YHLKRSQLYFQH--FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
H +R+ G A + Y+ + + E + + R
Sbjct: 125 PHSRRAMCVINRHLAGTGVVAFYDGPRHPPYTPSNWWRDPEGRRIVSGEMLKTIYYLLRF 184
Query: 241 N 241
Sbjct: 185 G 185
>gi|213053169|ref|ZP_03346047.1| hypothetical protein Salmoneentericaenterica_09720 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213419445|ref|ZP_03352511.1| hypothetical protein Salmonentericaenterica_17201 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213427543|ref|ZP_03360293.1| hypothetical protein SentesTyphi_19281 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582272|ref|ZP_03364098.1| hypothetical protein SentesTyph_14144 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213646888|ref|ZP_03376941.1| hypothetical protein SentesTy_06019 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857319|ref|ZP_03384290.1| hypothetical protein SentesT_19260 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289826173|ref|ZP_06545285.1| hypothetical protein Salmonellentericaenterica_12365 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
Length = 134
Score = 43.2 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 52/152 (34%), Gaps = 19/152 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 2 KYRYILRIAAGIILIMAMVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 54 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
G+ I +E +S T +N +++ +++
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQH 134
>gi|56412371|ref|YP_149446.1| hypothetical protein SPA0101 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|56126628|gb|AAV76134.1| hypothetical protein SPA0101 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 165
Score = 43.2 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 53/152 (34%), Gaps = 19/152 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I ++ + + + ++ G G +
Sbjct: 33 KYRYILRIAAGIILIMAMVFIHNVIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 85 -------TPSPVFQARLDHAIWLYQQHIIRALVLTGGYGAGAT----VSDAAIARQYVLE 133
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
G+ I +E +S T +N +++ +++
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILRQQH 165
>gi|205359861|ref|ZP_02832915.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205342506|gb|EDZ29270.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
Length = 178
Score = 43.2 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 52/152 (34%), Gaps = 19/152 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 46 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 97
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 98 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 146
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
G+ I +E +S T +N +++ +++
Sbjct: 147 KGIPAKAIFIEERSTVTRENIRYAKQILRQQH 178
>gi|302560203|ref|ZP_07312545.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302477821|gb|EFL40914.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 221
Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 2/121 (1%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T LY + T S + E+ Y + +E GV D I +E ++ +T
Sbjct: 41 DTTADLYHRGMTPLIVFTGATSRTTRDRMPRGEAEHYRERAMELGVPADAILVEPRARNT 100
Query: 158 FQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
+N +FS +++++ +++LVS Y +R+ + + + I
Sbjct: 101 GENIRFSRALLEDYGAVVSSVLLVSKPYEERRAYATARKLWPEVEWVSASTPMTLADYID 160
Query: 216 L 216
Sbjct: 161 S 161
>gi|86747962|ref|YP_484458.1| hypothetical protein RPB_0836 [Rhodopseudomonas palustris HaA2]
gi|86570990|gb|ABD05547.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 240
Score = 43.2 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 9/168 (5%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P+ A I SR+ + + L S + + + + + +
Sbjct: 53 ESRPSRAADGIVVLTGGSSRVSDAVDLLASGYGKRLLISGVHRTSGASEISRSVPDSKDW 112
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
V+ D + +T NA + +++I+V+S YH+ R+ H
Sbjct: 113 L--GCCVDLDR-----SAFNTRSNAAETRRWAHERGFRSLIVVTSNYHMPRAIAEMSHAM 165
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI--AYYRGNR 242
+ + + + ++ L L EY + A R R
Sbjct: 166 PDIELIPFSVIGEKWRDEAWWSSGATLRLLLSEYAKYVAVEARVRLAR 213
>gi|294671368|ref|ZP_06736218.1| hypothetical protein NEIELOOT_03076 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306916|gb|EFE48159.1| hypothetical protein NEIELOOT_03076 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 202
Score = 43.2 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G G E+ + + GV D I++E +S T++N FS+ ++ + II+
Sbjct: 1 MSGGTDGDGSNEAEAMRDMAVSMGVPADKIRIEPRSESTYENIAFSAPLL--HDAEQIII 58
Query: 179 VSSAYHLKRSQLYFQHF 195
VS A+HL R++ +
Sbjct: 59 VSDAFHLARAEWLAKRH 75
>gi|262183735|ref|ZP_06043156.1| hypothetical protein CaurA7_07078 [Corynebacterium aurimucosum ATCC
700975]
Length = 170
Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 15/130 (11%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
P SR+ + + + + II+S G E+ L+E GV +
Sbjct: 28 GVPGSLLRSRLDRAVVMARVLPEE----PIIVS-------GYGEAEPMARYLIERGVNPE 76
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT--KASCS 204
I LE + T +N + + ++ + +V++ +H+ R++L+ H GI +
Sbjct: 77 RIFLEPLATSTNENLERAHALCSD--YSYFRVVTNDFHVLRTRLWAWHLGIRIRMHGVGT 134
Query: 205 DYLNAYYSII 214
+ ++ +
Sbjct: 135 PRKDRPWNYL 144
>gi|295690243|ref|YP_003593936.1| hypothetical protein Cseg_2870 [Caulobacter segnis ATCC 21756]
gi|295432146|gb|ADG11318.1| protein of unknown function DUF218 [Caulobacter segnis ATCC 21756]
Length = 205
Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 28/212 (13%), Positives = 65/212 (30%), Gaps = 36/212 (16%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
++ ++ G G++ L P + + +V L +++
Sbjct: 4 LAALLIALMIWGLGLVAFTGRVDLSTPAPEP-------PEADGVVALTGASSL------- 49
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R+ RL + K + + + + V + +
Sbjct: 50 ----------RLEAATRLLEEGKGKRLLISGV-------NRETTRADVQSVTKAVKPIYD 92
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASC 203
+ L + +T NA ++ ++ K++I+V++ YH+ RS L G+
Sbjct: 93 CCVDLGFTAANTVGNALETAEWARSKGYKSLIVVTADYHMPRSMLELSAAMPGVKLFPYP 152
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ S + + EY L
Sbjct: 153 VKTDLNAHRWWKTSIS---ARRMIVEYCKYLA 181
>gi|159482172|ref|XP_001699147.1| hypothetical protein CHLREDRAFT_185300 [Chlamydomonas reinhardtii]
gi|158273210|gb|EDO99002.1| predicted protein [Chlamydomonas reinhardtii]
Length = 312
Score = 42.8 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 14/142 (9%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ + + IV+L G T ++PA R+ + L + ++ ++
Sbjct: 84 PEAHRTVDAIVVLAGGQTGPDSVPAWVER-------RLDTALSLQRLQRRPVPILSLGGG 136
Query: 120 GG------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQ 172
D + + ES L + G + + E S DT NA FS ++
Sbjct: 137 TPHKGPFLDERGFVIHESTACARYLQDRGADPSLLLKEVSSYDTVGNAYFSLTIHALPAG 196
Query: 173 GKNIILVSSAYHLKRSQLYFQH 194
+ + +V+S +H+ R+ F
Sbjct: 197 WRRLAVVTSDFHMPRTASLFHA 218
>gi|51891778|ref|YP_074469.1| hypothetical protein STH640 [Symbiobacterium thermophilum IAM
14863]
gi|51855467|dbj|BAD39625.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 187
Score = 42.8 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PT + + + R LYK+ + I+GGD + G+ E+
Sbjct: 20 VEDEPTPGDLILVFGGKRLERAERAAELYKAGLA----PKVFITGGDKRGIGVCEAERLR 75
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN----MQGKNIILVSSAYHLKRSQLY 191
+ ++E V + I +E + L+T + Q+S I+ KN++LVS+ +H++R +
Sbjct: 76 DHMVELSVPAEAIDIECEGLNTIEQVQYSVKRIEETIGWKNIKNVLLVSAPHHMRRVKRT 135
>gi|329963034|ref|ZP_08300814.1| hypothetical protein HMPREF9446_02407 [Bacteroides fluxus YIT
12057]
gi|328529075|gb|EGF56005.1| hypothetical protein HMPREF9446_02407 [Bacteroides fluxus YIT
12057]
Length = 194
Score = 42.8 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+R + + LY + + I+ + ++ + +L+ GV D I
Sbjct: 26 LEGDGLNRYQKAVELYDQGIAAKIVFSGNITDYEYGSFPFSDVL---PYILKEGVPADAI 82
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
E +SL+T + A M K ++LV+S H R+ L F ++
Sbjct: 83 VHEDKSLNTREQAVEVVKMAMENGWKRLVLVASHEHQYRAYLTFLRETLD 132
>gi|83859181|ref|ZP_00952702.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
gi|83852628|gb|EAP90481.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
Length = 191
Score = 42.8 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 68/219 (31%), Gaps = 44/219 (20%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R + + +L +G+ + Q +P G IV+L G
Sbjct: 7 RFLRLTAFILLTAFVVGFALFVR----------QARTFTPDASVRGQAIVVLTGG----- 51
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+R+ L + + + + D +A + + L E
Sbjct: 52 -------------PNRVSTAAALLQDGSGRRLLISGVNP--DSPPADIAAAAGASQALFE 96
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT- 199
V+ Q+ DT NA +++ + II+V+S YH+ R+ L Q +
Sbjct: 97 CCVDF-----GLQAADTIGNAAETAAWARQHGYDRIIVVTSDYHMPRALLELQAAMPDVR 151
Query: 200 -KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
A + + + L EY+ Y
Sbjct: 152 LVAYGVPAPAPW-------SGGHEARRWLVEYVKYAAVY 183
>gi|197104094|ref|YP_002129471.1| hypothetical protein PHZ_c0628 [Phenylobacterium zucineum HLK1]
gi|196477514|gb|ACG77042.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 211
Score = 42.8 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 38/213 (17%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ F + + + P P + IV L
Sbjct: 4 VAAFLVLALIWFAGLFAYAHRVQQSTPARLP---PPADGIVALTGA-------------- 46
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + L + + + + + + +L + V+
Sbjct: 47 --GSKERIAAAIGLLEDGYGRRVLVSGVNPEA--SREDIRNLSRAVRRLYDCCVDL---- 98
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHFGINTKASCSD 205
+ DT NA+ ++ + M+ +++ +V++ YH+ R+ L F G+
Sbjct: 99 -GFTAADTVGNARETAEWTEAMRYRSLTIVTADYHMPRAMLELRAVFHGTGVRLSTYAVP 157
Query: 206 Y---LNAYYSIIPLSANFYLTELALKEYIGILI 235
++++ P +A + EY L
Sbjct: 158 TPALKSSHWWRQPRAARL-----MVVEYCKYLA 185
>gi|325681016|ref|ZP_08160548.1| hypothetical protein CUS_5709 [Ruminococcus albus 8]
gi|324107245|gb|EGC01529.1| hypothetical protein CUS_5709 [Ruminococcus albus 8]
Length = 193
Score = 42.8 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 12/152 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLYKS + M + +AE + + GV DI LE S+
Sbjct: 46 RVPEAVRLYKSGRAPMMLFSGGKVQKTALGE-MAEWLSMETAAISLGVSERDILLEKCSM 104
Query: 156 DTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
+T +N S ++++ G IILV++AYH++R+ L +
Sbjct: 105 NTAENFSCSENLLREVLPDGGRIILVTTAYHMRRALLTAEK----ILPQYEFISCPVQKG 160
Query: 214 IPLSANFYLTELALK----EYIGILIAYYRGN 241
N+Y T+ + E+ G L Y R
Sbjct: 161 SATKENWYKTDKGRRTVLDEW-GKLRYYIRAG 191
>gi|315500246|ref|YP_004089049.1| hypothetical protein Astex_3264 [Asticcacaulis excentricus CB 48]
gi|315418258|gb|ADU14898.1| protein of unknown function DUF218 [Asticcacaulis excentricus CB
48]
Length = 214
Score = 42.8 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 36/216 (16%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ G ++ + + ++ + IV+L +
Sbjct: 2 RRLLAVVLVIGLWLAGLYAFADRVIHS--------TPAAEPEEAADAIVVLTGASD---- 49
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
RI E MRL + K M + + ++ L + KL E
Sbjct: 50 -------------MRIKEGMRLLERRKGARMLISGVNRE--VKREELLPVTEGSKKLYEC 94
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINT 199
V+ ++ T NA + K ++I+V+S YH+ RS L + G+
Sbjct: 95 CVDL-----GYEAQTTLGNAYEVAEWAKAKGFDDLIVVTSDYHVPRSLLEIKAALPGVKL 149
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
A ++ + + + EY L
Sbjct: 150 HAYPV--ATPTLDAREWWKSWRSSRVLIVEYSKYLA 183
>gi|320084338|emb|CBY94131.1| Uncharacterized protein ygjQ [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 118
Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 43/107 (40%), Gaps = 12/107 (11%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ ++ G G + PS +R+ + LY+ ++ T G
Sbjct: 24 ADCAIVAGAGVSGK--------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT-- 73
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++++ + +LE G+ I +E +S T +N +++ +++
Sbjct: 74 --VSDAAIARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQH 118
>gi|258542271|ref|YP_003187704.1| hypothetical protein APA01_11770 [Acetobacter pasteurianus IFO
3283-01]
gi|256633349|dbj|BAH99324.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636408|dbj|BAI02377.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639461|dbj|BAI05423.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642517|dbj|BAI08472.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645572|dbj|BAI11520.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648625|dbj|BAI14566.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651678|dbj|BAI17612.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654669|dbj|BAI20596.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 171
Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 61/173 (35%), Gaps = 20/173 (11%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+++ G PS +R+ + + + I G ++G
Sbjct: 6 VIIFGAALNPD-------GSPSVALLNRVHSALVFGAAH-----GPVVYIPTGGVPQNGQ 53
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHL 185
E+ V +L++GV D I E + DTF +A + +++ + I +VSS HL
Sbjct: 54 TEADVMAFCMLKAGVAPDTILPEPTAGDTFDSAVVCTRLLRQAGYSAAQPIAVVSSPLHL 113
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
R L + G +A +L A +P E + +
Sbjct: 114 PRCVLLMRLAGWKVQAVP--FLRAQPH-VPNMR--KKLLRIAHECLALPWDAL 161
>gi|168010458|ref|XP_001757921.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690798|gb|EDQ77163.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 352
Score = 42.8 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 23/149 (15%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL----------YKSCKQHS 111
+ I++L G +P R+ + ++L
Sbjct: 111 KSDPVDAILVLAGGQLPGGGVPVWVER-------RLDKALQLQKLSGHECCIVCLGNGTP 163
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKN 170
++ S G + L+ G + E S DT N F+ +
Sbjct: 164 HRPPLLTSEGFVIHESTS----CAEYLISKGAPVRVLIKECSSYDTIGNGFFALTQHAIP 219
Query: 171 MQGKNIILVSSAYHLKRSQLYFQH-FGIN 198
+ K + +V+SA+H+ RSQ F+ FG+
Sbjct: 220 QRWKKMAIVTSAFHMPRSQAIFEWVFGLQ 248
>gi|325066422|ref|ZP_08125095.1| hypothetical protein AoriK_01317 [Actinomyces oris K20]
Length = 117
Score = 42.8 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 13/105 (12%)
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ GV + I LE +S T N ++ ++ ++LV+S++H R+ +
Sbjct: 1 YAIARGVPPERILLEDRSTTTRTNISYTRDLLAERGMADPQVLLVTSSFHAVRTAILASD 60
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G+ + + +A FY+ L+EY+ +L R
Sbjct: 61 MGVPWAVAPA-----------RTAWFYIVNAWLREYVAVLTYRRR 94
>gi|16126457|ref|NP_421021.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|221235238|ref|YP_002517674.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
gi|13423723|gb|AAK24189.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|220964410|gb|ACL95766.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
Length = 205
Score = 42.8 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 49/160 (30%), Gaps = 12/160 (7%)
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P I + + S R+ RL + K + + + + +
Sbjct: 32 PEPPISDGVVALTGASTLRLEAATRLLEDGKGQRLLISGV-------NREATRAEIQAVT 84
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ + L + +T NA+ ++ ++ K++I+V++ YH+ RS L +
Sbjct: 85 KAVKPIYDCCVDLGFAAANTVGNARETAEWARSKGYKSLIVVTADYHMPRSMLELRAAMP 144
Query: 198 NTK--ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
N + EY L
Sbjct: 145 NVVLHPYPVKTDLNARRWWKTG---VSARRMIVEYCKYLA 181
>gi|188587339|ref|YP_001918884.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179352026|gb|ACB86296.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 230
Score = 42.8 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 76/232 (32%), Gaps = 52/232 (22%)
Query: 26 MSCFMLLFSFIGWGIIPTILLK--HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ +F I L+ L+ DG+ I++L G
Sbjct: 27 AILILTIFWDNLLTAIGKFLVAEEPLER-------------DGSYILVLQGGI------- 66
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHC------TIIISGGDPQKHGLAESIVYNNK 137
RI + L++ ++ T Q + + +
Sbjct: 67 ----------PDRIAHGVELHQDNYAENILMVESKSFTNYELMEQKQLDLPSSAEINKQA 116
Query: 138 LLESGVERDDIKLETQSLDTFQN-----AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
++ G++ D I + +D+ Q AQ+ SS + + +ILV+S YH KR++L
Sbjct: 117 AMQMGIDDDQINIIPGKVDSTQQEAGKVAQYLSSNYHSEEDLKVILVTSRYHSKRAKLIL 176
Query: 193 QHF-------GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
Q I+ +S S Y Y N EY+ ++ Y
Sbjct: 177 QTELKEHDLTNIDIVSSPSHY--DPYYPDEWWKNRRQARNTFMEYLKLINFY 226
>gi|290956634|ref|YP_003487816.1| hypothetical protein SCAB_21381 [Streptomyces scabiei 87.22]
gi|260646160|emb|CBG69253.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 221
Score = 42.8 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T LY + T S ++ E+ Y ++ +E GV I +E ++ +T
Sbjct: 41 DTTADLYHRGMAPLIVFTGATSRTTRERMPRGEAEHYRDRAVELGVPASAIIVEPKARNT 100
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHF 195
+N + S ++++ + LVS Y +R+ +
Sbjct: 101 GENIRLSRALLEEQRVPVSSVLLVSKPYEERRAYATARKL 140
>gi|46861|emb|CAA33876.1| putative polycistronic operon [Streptomyces coelicolor]
Length = 203
Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T LY + T S ++ E+ Y + +E GV I +E + +T
Sbjct: 23 ETTAELYHRGMAPVIVFTGATSRTTHERMPRGEAEHYRERAVELGVPERAILVEPNARNT 82
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHF 195
+N + S ++++++ LVS Y +R+ +
Sbjct: 83 GENIRLSRALLEDLGMPVTSVLLVSKPYEERRAYATARKL 122
>gi|197248860|ref|YP_002145083.1| hypothetical protein SeAg_B0110 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197212563|gb|ACH49960.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 165
Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 52/152 (34%), Gaps = 19/152 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 33 KYRYIIRIAAGIILIMATVFIHNAIAIY-------QFSQQNQTRIADCAIVAGAGVSGK- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 85 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 133
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
G+ I +E +S T +N +++ +++
Sbjct: 134 KGIPVKAIFIEERSTVTRENIRYAKQILRQQH 165
>gi|170078552|ref|YP_001735190.1| hypothetical protein SYNPCC7002_A1947 [Synechococcus sp. PCC 7002]
gi|169886221|gb|ACA99934.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 218
Score = 42.5 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 13/114 (11%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E R Q + +S G + +E D ++L+ Q+ DT
Sbjct: 61 EERERFAAQFAQEHPDLKVWVSSG-------SPPEYARQIFANYQIEGDRLQLDYQAEDT 113
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF------QHFGINTKASCSD 205
N K ++ L++S H+ R++L + I SD
Sbjct: 114 VTNFTSLVDEFKQENIDSVYLITSENHMNRAKLVASIVFGTRDIAIKPVPVPSD 167
>gi|332710355|ref|ZP_08430303.1| hypothetical protein LYNGBM3L_50550 [Lyngbya majuscula 3L]
gi|332350904|gb|EGJ30496.1| hypothetical protein LYNGBM3L_50550 [Lyngbya majuscula 3L]
Length = 208
Score = 42.5 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 69/234 (29%), Gaps = 50/234 (21%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ +++RK+ + +L + + I R L+ +I+ L
Sbjct: 17 FGYPRKTLRKMRVVFTVTILLIALSFIPI-------------RLGLAHLQSPTPEVILTL 63
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G T Q + I +S G P
Sbjct: 64 GGDITREKFTA----------------------EFAQQHPNLDIWVSSGQPTP------- 94
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY- 191
E+G+ + ++ +++DT N + ++ L++S +H++RS
Sbjct: 95 QAQKVFREAGIPDQQVHIDRRAIDTVTNFTSLVQDFQTHDIHHVYLITSDFHMRRSIAIA 154
Query: 192 ---FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL---KEYIGILIAYYR 239
F GI S + ++ + + + + L Y R
Sbjct: 155 FFVFGSHGIAFTPVAIPSQRPEESWLRVARDVGRSVVWIITGH-TGASLHYYLR 207
>gi|114326797|ref|YP_743954.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
gi|114314971|gb|ABI61031.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
Length = 216
Score = 42.5 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 21/189 (11%), Positives = 56/189 (29%), Gaps = 29/189 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L + R + + L ++ L S + + IV+L
Sbjct: 16 LSRRMGRAMVSVLNGFGLLGGFALLVLSGGFLWFAWQS----QHVLRAPSHADGIVVLTG 71
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G R+ ++L + + + + + G + +
Sbjct: 72 G------------------AERVATGLKLLAAGRGSVLLISGVA-------KGASLGTLA 106
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
++ + L ++ T NA ++ +++I+V++ YH+ R+ +
Sbjct: 107 RVAGIDPTPLEGRVMLGYEAATTRGNALETADWAHERHLRSVIVVTAGYHMPRALAELRR 166
Query: 195 FGINTKASC 203
+
Sbjct: 167 AMPDVILYP 175
>gi|168998459|ref|YP_001687731.1| hypothetical protein pSA11_00005 [Streptomyces cyaneus]
Length = 221
Score = 42.5 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ LYK + T S ++ E++ Y + +E GV D+ +E ++ +T
Sbjct: 41 DTAVDLYKRGMVPLLLFTGATSPTTRERMPRGEAVHYRERAVELGVPSSDVLVEPRARNT 100
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHF--GINTKASCS 204
+N +FS +++ + L+S Y +R+ + G+ ++ S
Sbjct: 101 GENIRFSRELLEEAGVEVSSVLLISKPYEERRAYATARKLWPGVEVVSASS 151
>gi|315122363|ref|YP_004062852.1| hypothetical protein CKC_03075 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495765|gb|ADR52364.1| hypothetical protein CKC_03075 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 85
Score = 42.1 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 45/60 (75%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
IG G+IP ILLK+LQF YQ PL SPQW+K+GNIIVLLGNGT IPT+P + IE F
Sbjct: 2 ILCIGSGLIPAILLKNLQFPYQTPLSSPQWEKEGNIIVLLGNGTEKIPTLPTVGIELLFN 61
>gi|312883139|ref|ZP_07742870.1| hypothetical protein VIBC2010_07619 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369299|gb|EFP96820.1| hypothetical protein VIBC2010_07619 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 265
Score = 42.1 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + + II+S G +K + E+ N L+ G+ + + E+ SLD
Sbjct: 63 LERRLDDAYKMAEEDKSLPIILS-GKGRKEDVVEADYMYNYLIRKGLNGERLYKESLSLD 121
Query: 157 TFQNAQFSSSMIKN----MQGKNIILVSSAYHLKRSQLYFQ 193
T NA+FS I ++ +++++ +H RS FQ
Sbjct: 122 TVGNAEFSYFTITENESLKDIRDWLVITNNFHAMRSLNTFQ 162
>gi|153839788|ref|ZP_01992455.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|260902700|ref|ZP_05911095.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|149746696|gb|EDM57684.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|308108251|gb|EFO45791.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
Length = 212
Score = 42.1 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LY + + +E+ + + +GV D I +ET+S ++
Sbjct: 38 EHAAALYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFADIARLAGVPSDAILVETRSTNS 97
Query: 158 FQNAQFSSSMIKNMQGKN--IILVSSAYHLKRSQLYFQHF 195
+N +F+ ++K + IILV + +R+ F+
Sbjct: 98 GENVRFTEQLLKEKGIQCESIILVQKPFMERRAIATFEKQ 137
>gi|28897926|ref|NP_797531.1| hypothetical protein VP1152 [Vibrio parahaemolyticus RIMD 2210633]
gi|260364389|ref|ZP_05777027.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260877083|ref|ZP_05889438.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260895744|ref|ZP_05904240.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|28806140|dbj|BAC59415.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308088298|gb|EFO37993.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|308093911|gb|EFO43606.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308115173|gb|EFO52713.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
Length = 212
Score = 42.1 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LY + + +E+ + + +GV D I +ET+S ++
Sbjct: 38 EHAAALYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFADIARLAGVPSDAILVETRSTNS 97
Query: 158 FQNAQFSSSMIKNMQGKN--IILVSSAYHLKRSQLYFQHF 195
+N +F+ ++K + IILV + +R+ F+
Sbjct: 98 GENVRFTEQLLKEKGIQCESIILVQKPFMERRAIATFEKQ 137
>gi|145346673|ref|XP_001417809.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578037|gb|ABO96102.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 228
Score = 42.1 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 19/157 (12%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + + IV++ G T+PA R+ + I
Sbjct: 2 AVVARANGGLDAIVVVAGGIEDDGTLPAWVTP-------RLDYAAT-AYANATADAKPRI 53
Query: 117 IISGGDPQKHGLAESI---------VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++SG + + L++ GV D + +T S+DT NA +S +
Sbjct: 54 LLSGSMTPHKPPPMAKGGFNLHESTSMASYLMDKGVPADSMLKDTASMDTIGNAYYSLCL 113
Query: 168 IK-NMQGKNIILVSSAYHLKRSQLYFQHF-GINTKAS 202
+ +V+SA+H++R++ F+ G+
Sbjct: 114 HAIPRAWTRVEVVTSAFHMERTRAAFEWVWGLAPHGV 150
>gi|194334031|ref|YP_002015891.1| hypothetical protein Paes_1216 [Prosthecochloris aestuarii DSM 271]
gi|194311849|gb|ACF46244.1| protein of unknown function DUF218 [Prosthecochloris aestuarii DSM
271]
Length = 196
Score = 42.1 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 66/226 (29%), Gaps = 37/226 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + S F+ F+G G I + + ++I++LG
Sbjct: 4 FLKKTLALLATSAFLTAMIFLGLGYIVSW--------------PAASPEKADVIIVLGG- 48
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
R+ + LY + + T + S
Sbjct: 49 ----------------DDGLRVSKGAELYHAGFADDLLLTGLDSRYYRPGKLNWRERK-- 90
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L+ G+ + I ++ S T++ A + S + + +++S H+ R Q +
Sbjct: 91 --LISLGIPGEAIHVDIVSTSTWEEAANTLSAMNKNGWQRALVISDPPHMLRLQHTWTKV 148
Query: 196 --GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G + + ++ + N + L E L
Sbjct: 149 FTGSSKRFVLIATKPEWWHPLLWWNNETGSRFVLSEIKKNLYYAVM 194
>gi|114566272|ref|YP_753426.1| hypothetical protein Swol_0732 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337207|gb|ABI68055.1| hypothetical protein Swol_0732 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 211
Score = 42.1 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 70/237 (29%), Gaps = 45/237 (18%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ +K F+ +L + + ++ + + I++L
Sbjct: 1 MKAKKKKALFICIILLALLAVFFRYAGVGIVSS------------DSPEKADFIIVLMG- 47
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-----TIIISGGDPQKHGLAE 130
RI + LY+ + +
Sbjct: 48 ----------------SGPDRILGAVELYEKGYAPYIMMVENWQPGYELLESRGVELPRD 91
Query: 131 SIVYNNKLLESGVERDD-IKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKR 187
+ + + ++ G+ + I L + T A + +K Q ++LVSS +H KR
Sbjct: 92 AELAASVGVQLGIPEEAFIILPGDARSTQDEALIVTQYLKEQQAGVDMVLLVSSKFHSKR 151
Query: 188 SQLYFQH------FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ F + + + Y + ++ + + + EY+ ++ Y
Sbjct: 152 AAKIFCWALADSGQDVKVLSCPTPYDD--FNAAAWWQSREDAKRVVSEYVKLVNFYV 206
>gi|319791650|ref|YP_004153290.1| hypothetical protein Varpa_0961 [Variovorax paradoxus EPS]
gi|315594113|gb|ADU35179.1| protein of unknown function DUF218 [Variovorax paradoxus EPS]
Length = 211
Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 67/178 (37%), Gaps = 15/178 (8%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
LL ++ + ++LG + + P+ R+ + L ++ + +
Sbjct: 40 LLDNPPQRPADAALILG-------SRAYLDGRPNPCLTGRVDTGIALAQAGRVKQ----L 88
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ +GG ++ G E+ V G + E S T N S +++ +++
Sbjct: 89 VFTGGVDKEDGRIEADVMQQHAQGLGFAGP-MLQEPASTSTRLNLSLSRPLLQAAGVRSV 147
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++VS YHL R + + G + + Y A S + AL+E I+
Sbjct: 148 VIVSEPYHLWRVERLVRMSGFD-QTFDVQYAAAPTSCWRRWGMLFK--GALREPAAII 202
>gi|227874501|ref|ZP_03992673.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227839645|gb|EEJ50103.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 329
Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+LL I L++++ + + +RK +FF L S+ + ++ + L+ +L
Sbjct: 33 LLLGAIHLLMAFVYKAPERLRKNPLFFRFRIFGLSSYCIFFLLFSYLIGYL-----SQYH 87
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
QWK + I+++G+ P ++ +R+ Y+ TI++
Sbjct: 88 YGQWKDPLSYILVVGSELENNKITPLLQ--------NRLERADLCYQENPS----ATIVL 135
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
SGG + AE+ V +L+ G+ D + +E S T Q +
Sbjct: 136 SGGKGRNSASAEASVMYQSMLKMGIPADAMLMEFYSKTTEQKLSY 180
>gi|163801177|ref|ZP_02195077.1| putative manganese-dependent inorganic pyrophosphatase [Vibrio sp.
AND4]
gi|159175526|gb|EDP60323.1| putative manganese-dependent inorganic pyrophosphatase [Vibrio sp.
AND4]
Length = 210
Score = 42.1 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LY + + +E+ + +GV + I ETQS ++
Sbjct: 38 EYAAELYHQKLASLIVFSGGKGRFTDSLFEKSEAETFAEIAKLAGVPNEAILTETQSTNS 97
Query: 158 FQNAQFSSSMIKNMQGKNI--ILVSSAYHLKRSQLYFQHF 195
+N +F+ ++++ ILV + +R+ F+
Sbjct: 98 GENIRFTDQLLQDKGVNCESLILVQKPFMERRAIATFEKQ 137
>gi|296447118|ref|ZP_06889050.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
gi|296255387|gb|EFH02482.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
Length = 232
Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 65/216 (30%), Gaps = 34/216 (15%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+ + L F+ G + + L P + +V+L G+
Sbjct: 21 TLLLCLAGFLASGFVAGFIGFAL----SLERAEPILTVQADGVVVLTGGS---------- 66
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
RI E L + + T + + + +
Sbjct: 67 --------DRIHEAAELLARGQARRLLITGV-------NKSTRGPEIAKLLPVSRQLFDC 111
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAYHLKRSQLYFQHF--GINTKASC 203
I L ++LDT NA + K ++V +S YH+ R+ + G+
Sbjct: 112 CIDLGYEALDTAGNAAETREWAKARGIGGSLIVVTSNYHMPRALVELSAALPGVELYPFP 171
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ + + + + L EY+ L A R
Sbjct: 172 V--VSEHMQVADWLDDASVARLIGGEYVKYLFALAR 205
>gi|219120159|ref|XP_002180824.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407540|gb|EEC47476.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 334
Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 86/236 (36%), Gaps = 28/236 (11%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHL--QFSY--QRPLLSPQWKKDGNIIV 70
+ + MS ++ + + ++ + + ++ + ++I+
Sbjct: 19 MSSFRVIAFSTMSFLGIIAILVVFTLVRNFHGAPIKAESNFFSVADEIPDSVVSRLDVIL 78
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI--------IISGG- 121
+LG G P + ++ + + +L + + +S G
Sbjct: 79 VLGGGVPSSLDSPPVYVQRRCDDAAAVVSRHQLLPATFSKKSTKPVSSKSLPILCLSAGT 138
Query: 122 -------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-G 173
+ ES L + ++ +ET S DT NA ++ + ++
Sbjct: 139 AHLPQLLSANGLPIWESTSSAAYLEQKH-NIQNVFVETTSYDTIGNAFYARTSHTDIVGW 197
Query: 174 KNIILVSSAYHLKRSQLYFQH-FGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+ +++V++ +H+ RS+ F+ FGI+ S+ Y S + L+E AL+
Sbjct: 198 RKLLVVTNEFHMDRSKAIFEWIFGID-----SEKRAGYELYFLSSLDGDLSEEALR 248
>gi|116622945|ref|YP_825101.1| hypothetical protein Acid_3847 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226107|gb|ABJ84816.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 204
Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 50/144 (34%), Gaps = 18/144 (12%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD-IKLETQS 154
R+ L K + I+ G P +G ES + L+ G + + + Q+
Sbjct: 60 RLQHAAELVKQG-----YVPRILVSGPPGFYGTNESDAAIHWALQQGYPPEWFVAVPHQA 114
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF----QHFG----INTKASCSDY 206
T A+ + ++ + +LV+S YH R++ F + G + A+ Y
Sbjct: 115 TSTLAEAKVMLTYMRQHNIHSFLLVTSNYHTARARRIFLGAERDSGGGPEMRVVAAPDKY 174
Query: 207 LNAYYSIIPLSANFYLTELALKEY 230
+ A E+
Sbjct: 175 FTPEAWWQSREGR----KTAFMEW 194
>gi|222055241|ref|YP_002537603.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
gi|221564530|gb|ACM20502.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
Length = 198
Score = 42.1 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 57/177 (32%), Gaps = 33/177 (18%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + IV+L G RI E RLY+ + +
Sbjct: 38 NCDAIVVLAGGR------------------GRIEEGSRLYRENHARWLFLIGVDPSVRKS 79
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ + + LE S +T +NA ++ MI +I L++S YH
Sbjct: 80 DLFRE---------RKGERSGEGVYLEKVSRNTLENALYAREMIVGRNIDSIELITSRYH 130
Query: 185 LKRSQLYFQHF---GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+KR+ L F+H I D N S +F L E+ +
Sbjct: 131 MKRATLIFRHVLPKDIAIYPHPVDTKNLKEEWWNHSGSF---RLLFSEFYKYCLFRV 184
>gi|332188414|ref|ZP_08390138.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
gi|332011560|gb|EGI53641.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
Length = 177
Score = 41.7 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 33/161 (20%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
++ +GW + + L P + IV+ G
Sbjct: 4 LIGLVALGWCLGFAAFMLSL--------PHPLENNTTDAIVVPTGG-------------- 41
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
RI + L ++ + M T + G+ + + I
Sbjct: 42 ----AGRIDRGIALLQAHQAKRMLVTGVAP-------GVRPIDLARTYRTAPSLFSCCID 90
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L +++DT NA+ ++ ++ + + LV+S +HL R+++
Sbjct: 91 LGLEAVDTRSNAEETARWVREHGYRTVRLVTSDWHLPRARM 131
>gi|83313543|ref|YP_423807.1| hypothetical protein amb4444 [Magnetospirillum magneticum AMB-1]
gi|82948384|dbj|BAE53248.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 206
Score = 41.7 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 43/190 (22%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ +V+L G R+ + L ++ + + + +
Sbjct: 39 VEDQSTVTDAVVVLTGG------------------AERLNSGIALLEAGRGRKLFVSGVH 80
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDD----IKLETQSLDTFQNAQFSSSMIKNMQGK 174
G D L ++ V + I L + DT NA +++ +
Sbjct: 81 RGVDLPD-----------LLRQAHVSPERARCCIVLGHAADDTVGNATETAAWMGREGFS 129
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTK-----ASCSDYLNAYYSIIPLSANFYLTELALKE 229
++ LV++AYH++RS L + + + + P +A+ E
Sbjct: 130 SLRLVTAAYHMRRSLLELRRALPDATIIAHPVFPDAFKRDQWWRWPGTAHLLAV-----E 184
Query: 230 YIGILIAYYR 239
Y L A R
Sbjct: 185 YTKYLAALAR 194
>gi|21223012|ref|NP_628791.1| hypothetical protein SCO4629 [Streptomyces coelicolor A3(2)]
gi|20455525|sp|Q04310|Y4629_STRCO RecName: Full=Uncharacterized protein SCO4629
gi|10129725|emb|CAC08282.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 221
Score = 41.7 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T LY + T S ++ E+ Y + +E GV I +E + +T
Sbjct: 41 ETTAELYHRGMAPVIVFTGATSRTTHERMPRGEAEHYRERAVELGVPERAILVEPNARNT 100
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHF 195
+N + S ++++++ LVS Y +R+ +
Sbjct: 101 GENIRLSRALLEDLGMPVTSVLLVSKPYEERRAYATARKL 140
>gi|78189450|ref|YP_379788.1| hypothetical protein Cag_1489 [Chlorobium chlorochromatii CaD3]
gi|78171649|gb|ABB28745.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 235
Score = 41.7 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 66/191 (34%), Gaps = 36/191 (18%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
+ LL L + ++IV+LG
Sbjct: 42 IAAMSFVSIGLLLSL---------PASKPQKADVIVVLGG-----------------DKG 75
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ + LY + T I D + + + ++ + GV++ I ++T+S
Sbjct: 76 LRVQKGAELYNDGFSKKVLLTGI----DRRYYRPSRPNWRERRIRDLGVKKSAIVVDTKS 131
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF------GINTKASCSDYLN 208
+++ A +++ ++ + ++ I+VS H+ R L + H A+ D+ +
Sbjct: 132 QTSWEEAMNTAATMERRKWESAIVVSDPPHMLRLWLTWHHAFAGTSKRFTLVATKPDWWH 191
Query: 209 AYYSIIPLSAN 219
+ +
Sbjct: 192 PIFWWKHKTNY 202
>gi|258591830|emb|CBE68131.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 232
Score = 41.7 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 68/232 (29%), Gaps = 37/232 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++ + IR + LL +G + + ++L ++ + I +L
Sbjct: 1 MIGRLIRWLIVFPLLGLLLY-VGHPFLLRAMGRYL--------ITEDRLQKAEAIAVLAG 51
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT------IIISGGDPQKHGL 128
R E +RLY+ + T +
Sbjct: 52 ----------------DGGVGRTLEAVRLYQDGYAPRIILTRQRLPTGYEALTRLGITVP 95
Query: 129 AESIVYNNKLLESGVERDDI-KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E + L V + ++ +S T ++K + + IILV++ H R
Sbjct: 96 EERHIQWMVLKAMRVPVTAVLQVNERSDSTASEMVHLVRLLKEHRIRTIILVTNKSHSTR 155
Query: 188 SQLYFQ---HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + + + + Y + + L EY+ +L
Sbjct: 156 ASKILARVSRNNLTSISRPTRYDT--FDPDGWWRSRADARDVLFEYLKLLDY 205
>gi|255018888|ref|ZP_05291014.1| hypothetical protein LmonF_16276 [Listeria monocytogenes FSL
F2-515]
Length = 76
Score = 41.7 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 14/86 (16%)
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
+S T +N ++S++ ++V+S YH+ R+ + + GI+ +
Sbjct: 2 KSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLPA-------- 50
Query: 213 IIPLSANFYLTELALKEYIGILIAYY 238
S F + ++E + I A+
Sbjct: 51 ---TSQTFAKYKGMMREVLSITYAWV 73
>gi|38233272|ref|NP_939039.1| hypothetical protein DIP0665 [Corynebacterium diphtheriae NCTC
13129]
gi|38199531|emb|CAE49182.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 153
Score = 41.7 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 64/160 (40%), Gaps = 22/160 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG+ +P R+ + L I++S G
Sbjct: 8 ILVLGSKVRGA--------QPGHVLRWRLEHALEL-----SRHTTGPIVVS-------GK 47
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ V ++ L+ GV+ + +E ++ T +N + + +++ + ++V+S +H R+
Sbjct: 48 GEAYVMDDWLIRHGVDYRRLIVEPEATSTNENIENAHALLPDTH--EWLVVTSDFHKLRT 105
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+ +H G+ + S + + + F L L+
Sbjct: 106 LAWARHLGVPIRVSSAVTKPPFRVNNFVRECFALPHSLLR 145
>gi|300024263|ref|YP_003756874.1| hypothetical protein Hden_2757 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526084|gb|ADJ24553.1| protein of unknown function DUF218 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 214
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 37/185 (20%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+L G R+ +L + + + +
Sbjct: 40 KADGIVVLTGGDL------------------RVEAGAKLMNEGRAKRLLISGV------- 74
Query: 125 KHGLAESIVYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ L L++ + L ++LDT NA + + +N +I+V+S Y
Sbjct: 75 -NRKVRREEMQRLLGLDAKTFNCCVDLGYEALDTVGNADETRTWARNNGYTKLIIVTSRY 133
Query: 184 HLKRSQLYFQHFGINT--KASCSDYLNAYY--SIIPLSANFYLTELALKEYIGIL--IAY 237
H+ RS + + S T + + EY+ L +A
Sbjct: 134 HMPRSLAELALVMPKVTLIPYPVTPRHFPETAWWLHSS----TTRVLVSEYLKFLPAVAR 189
Query: 238 YRGNR 242
R
Sbjct: 190 LAAQR 194
>gi|213964532|ref|ZP_03392732.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213952725|gb|EEB64107.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length = 281
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 64/190 (33%), Gaps = 28/190 (14%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG PS R+ + + + C+ +
Sbjct: 96 KPTVPPHTVVVLGCALKNN--------RPSALLARRLQRAVA-ACDERTERIICSGGLGS 146
Query: 121 GDPQKHGLAESIVYNNKLLESG---VERDDI--KLETQSLDTFQNAQFSSSMIKNMQGK- 174
+E+ L + V+R DI E QS +T +N ++ +++ G
Sbjct: 147 EAVTDATCSEADAMVEWLEANAGDVVKRGDIELIPEDQSTNTSENIDYACELMRGTDGAL 206
Query: 175 --NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++V+S +H R + G+ + Y Y L+E++
Sbjct: 207 SAGTVVVTSDFHAPRVAKLVRERGLESWCIVGAYTPLR----------YWATSLLREFLA 256
Query: 233 ILIAYY-RGN 241
I + RGN
Sbjct: 257 QFILWAPRGN 266
>gi|162449130|ref|YP_001611497.1| hypothetical protein sce0860 [Sorangium cellulosum 'So ce 56']
gi|161159712|emb|CAN91017.1| hypothetical protein sce0860 [Sorangium cellulosum 'So ce 56']
Length = 185
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 12/144 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG R+ PS + + + + +I SG
Sbjct: 4 RMPLHADAIVVLGC-----------RVFPSGRPAAPGARRAARAAEAYRAGVAPWVIASG 52
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V +L +GV I + SL T +NA FS+++++ + + +V+
Sbjct: 53 GRRWG-AQVEARVLAAELRRAGVPAHAILQDLWSLTTHENAIFSAALLRRVGARRAAIVT 111
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
++H+ R+ F GI+ +
Sbjct: 112 CSWHMARALQNFHDVGIDACGLPA 135
>gi|156974135|ref|YP_001445042.1| hypothetical protein VIBHAR_01847 [Vibrio harveyi ATCC BAA-1116]
gi|156525729|gb|ABU70815.1| hypothetical protein VIBHAR_01847 [Vibrio harveyi ATCC BAA-1116]
Length = 212
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+LY + + +E+ + +GV + I +ETQS ++
Sbjct: 38 EYAAKLYHQKLAPLIVFSGGEGRFTDGLFDKSEAETFAEIAKLAGVPNEAILIETQSSNS 97
Query: 158 FQNAQFSSSMIKNMQGKNI--ILVSSAYHLKRSQLYFQHF 195
+N +F+ ++ ILV + +R+ F+
Sbjct: 98 GENVRFTEQLLIEKGVNCESLILVQKPFMERRAIATFEKQ 137
>gi|294010104|ref|YP_003543564.1| hypothetical protein SJA_C1-01180 [Sphingobium japonicum UT26S]
gi|292673434|dbj|BAI94952.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 176
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 37/173 (21%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I LL +G+ L + L + + IV+L G
Sbjct: 2 IVRFIAVTLLGWMLGFAWFAIFLPQPL------------DGRQTDAIVVLTGG------- 42
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + L + M + + + + +
Sbjct: 43 -----------AGRIDRGLALLQDGAAKRMLISGV-------DRSVRPVELAAQYKVPER 84
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ I L +++DT NA ++ ++ K + L+++ +H++RS L +
Sbjct: 85 LFSCCITLGREAIDTRSNAIETAHWLERRDFKTVRLITTDWHMRRSALELRQA 137
>gi|166368105|ref|YP_001660378.1| hypothetical protein MAE_53640 [Microcystis aeruginosa NIES-843]
gi|166090478|dbj|BAG05186.1| hypothetical protein MAE_53640 [Microcystis aeruginosa NIES-843]
Length = 207
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 52/211 (24%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + L+ + +GW L L+ + +P I +LG
Sbjct: 21 KSRLKLLAIPLILAILGW------LYHDLRQQWLKP----------EAIFVLGGH----- 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
R +L K I +S G P++ +
Sbjct: 60 -------------ADRERFAAKLAKEYP----DLPIWVSSGSPRR-------YVRKIFKK 95
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHFG 196
+G+ + + L+ + DT N + +K ++ LV+S H++R++L F G
Sbjct: 96 AGIPPERLHLDYNARDTVTNFTSLADQLKAQGIDSVYLVTSDNHMRRARLVGEIVFGSRG 155
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELAL 227
I K + PL + A+
Sbjct: 156 IMIKPVTVPSQSPPE---PLEKSLRDGFRAI 183
>gi|318061872|ref|ZP_07980593.1| hypothetical protein SSA3_28290 [Streptomyces sp. SA3_actG]
gi|318078572|ref|ZP_07985904.1| hypothetical protein SSA3_18119 [Streptomyces sp. SA3_actF]
Length = 227
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LY++ ++ T S E++ ++ L GV + LE ++ +T
Sbjct: 52 TYAADLYRAGLFPTLVFTGGNSSDTLGAFPRGEAVHFHEHALALGVPAHAMLLEPRAANT 111
Query: 158 FQNAQFSSSM--IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
QN F+ ++ ++++LV+ Y +R+ F+ + C+ ++ S +
Sbjct: 112 GQNIAFARETLTDAGLRPRSVLLVTMPYMERRAFATFRKQWPEVEVVCASDPLSFDSYL 170
>gi|290959775|ref|YP_003490957.1| hypothetical protein SCAB_53771 [Streptomyces scabiei 87.22]
gi|260649301|emb|CBG72416.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 183
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T L+ ++ T S + E+ Y ++ +E GV I +E + +T
Sbjct: 3 DATAELFHRGMAPAVLFTGATSRTTRDRMPRGEAEHYRDRAVELGVPASVILVEPNARNT 62
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHF 195
+N +FS ++++ + LVS Y +R+ +
Sbjct: 63 GENIRFSRALLEARRIPVSSALLVSKPYEERRAYATARKL 102
>gi|298493004|ref|YP_003723181.1| hypothetical protein Aazo_4922 ['Nostoc azollae' 0708]
gi|298234922|gb|ADI66058.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 198
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 54/200 (27%), Gaps = 46/200 (23%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++K + +S F+ I R ++ I+ LG G
Sbjct: 8 LKKYWILSLASFSLVFLSIIPI-------------RIAIASYQAPHPQAILTLGGGQERE 54
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
Q+ + I IS G
Sbjct: 55 KFTA----------------------EFAQNHPNLHIWISSGI-------LPAQAFAIFE 85
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF----QHF 195
E + + I L+ +++DT N K+I L++S +HL R++
Sbjct: 86 EVSIPTERIHLDYRAVDTVTNCTTLVHDFHKYHIKHIYLITSDFHLPRAKTIATLVLGSQ 145
Query: 196 GINTKASCSDYLNAYYSIIP 215
GI SI P
Sbjct: 146 GITFTPISIPSERPRESIFP 165
>gi|307293520|ref|ZP_07573364.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
gi|306879671|gb|EFN10888.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
Length = 176
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 37/173 (21%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I LL +G+ +L + L + + IV+L G
Sbjct: 2 IVRFIALTLLAWMLGFAWFAILLPQPL------------DGRQTDAIVVLTGG------- 42
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + L + M + + + + +
Sbjct: 43 -----------AGRIDRGLSLLQDGAAKRMLISGV-------DRSVRPAELAAQYDAPER 84
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ I L +++DT NA ++ ++ K + L+++ +H++RS L +
Sbjct: 85 LFACCITLGREAIDTRSNAIETAHWLERRDFKTVRLITTDWHMRRSALELRQA 137
>gi|298491733|ref|YP_003721910.1| hypothetical protein Aazo_2992 ['Nostoc azollae' 0708]
gi|298233651|gb|ADI64787.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 232
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 41/181 (22%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ + ++ F L F W ++ L K + ++L
Sbjct: 13 LKARFRKLWRLLQNIVFGLCFILFSWL------------TFTTITLVSASSKPVDGFLVL 60
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G R +L K Q I+IS G +
Sbjct: 61 GGSIR------------------REIHAAQLAKQYPQ----IPILISQG-------SPDP 91
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ + LE + TF+N +++N + + + L++S H R++L
Sbjct: 92 CIWIIFQREAAHLEKVWLENCAHSTFENFYNGVPILRNWRVRKVKLITSGTHFFRAKLMA 151
Query: 193 Q 193
Q
Sbjct: 152 Q 152
>gi|94497844|ref|ZP_01304410.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
gi|94422733|gb|EAT07768.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
Length = 176
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 52/173 (30%), Gaps = 37/173 (21%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I ++ LL +G+ L P + + IV+L G
Sbjct: 2 IVRLAALALLGWVLGFAWFAIFL------------PEPLDGRRTDAIVVLTGG------- 42
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + L + M + + + +
Sbjct: 43 -----------PGRIDRGIALMQQGAARRMLISGV-------DRSVRPGELAAQYDAPEA 84
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ I L +++DT N ++ + + + LV++ +H++RS L
Sbjct: 85 LFDCCITLGREAIDTRSNGLETARWLARRDYQTVRLVTTDWHMRRSALELTQA 137
>gi|269960840|ref|ZP_06175211.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834504|gb|EEZ88592.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 212
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+LY+ + + +E+ + +GV + I +ET+S ++
Sbjct: 38 EYAAKLYQQKLAPLIVFSGGEGRFTDGLFDKSEAETFAEIAKLAGVPSEAILVETKSSNS 97
Query: 158 FQNAQFSSSMIKNMQGKNI--ILVSSAYHLKRSQLYFQHF 195
+N +F+ ++K ILV + +R+ F+
Sbjct: 98 GENVRFTEQLLKEKGISCDSLILVQKPFMERRAIATFEKQ 137
>gi|311032605|ref|ZP_07710695.1| hypothetical protein Bm3-1_19074 [Bacillus sp. m3-13]
Length = 207
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 16/150 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGD-PQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ ++LY+ + I+ SGG + L+E+ + K +E GV +DI +E QS
Sbjct: 48 RLPPAIQLYQEGRAG----KILFSGGVVWDGNQLSEAQLLAEKAMELGVPSEDILIENQS 103
Query: 155 LDTFQNAQFSSSMIKN----MQGKNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYL 207
L T +N S ++ + +I+V+S YH++R L + + I+ +
Sbjct: 104 LHTKENVLASLLVLDRALHLHKISRLIVVTSHYHMRRMNLKLRTYMPDWIDYSLCPVNDR 163
Query: 208 NAYYS-IIPLSANFYLTELALKEYIGILIA 236
E E ++
Sbjct: 164 TTREDNWFLNPYGRQRVEA---ESAKLISY 190
>gi|315647696|ref|ZP_07900797.1| hypothetical protein PVOR_20324 [Paenibacillus vortex V453]
gi|315276342|gb|EFU39685.1| hypothetical protein PVOR_20324 [Paenibacillus vortex V453]
Length = 202
Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH-GLAESIVY 134
+ I ++ R+++ + LY + I+ +GGD E+ +
Sbjct: 27 VDDGTQLADIIFVFGGKNLDRVWKAVELYNDGRAPY----ILFAGGDRFGEWDQPEATMM 82
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN----MQGKNIILVSSAYHLKRSQL 190
++ ++ GV + I +ET S T +N S ++ Q + ++ VS+ H++R QL
Sbjct: 83 RDEAVKMGVPPESIFIETMSNHTKENVIASLIVLDRALGLQQIQRLLFVSAPSHMRRCQL 142
Query: 191 YFQHF 195
+ F
Sbjct: 143 LLKTF 147
>gi|228969746|ref|ZP_04130516.1| hypothetical protein bthur0004_64000 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228789968|gb|EEM37780.1| hypothetical protein bthur0004_64000 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 103
Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H I
Sbjct: 1 MKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHINIE 60
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKE---YIGIL 234
AS + + Y + KE YIG +
Sbjct: 61 AYASPT--PTSAYKTLDT-----EIPFFFKELFSYIGYV 92
>gi|332637197|ref|ZP_08416060.1| hypothetical protein WcibK1_00790 [Weissella cibaria KACC 11862]
Length = 213
Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 3/121 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+L+ K + + E+ Y + +GV D I +E +S ++
Sbjct: 40 EHAAKLFLQGKADFIVAAGGFGKITRDLWRIPEAEKYAEIMRAAGVPADKIFIENESTNS 99
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
QN QF+ ++ + Q +VS Y +R+ Q D + P
Sbjct: 100 GQNFQFTKRLLASKQITVRSGLIVSKTYLGRRAMATAQRQ-WPEVDWYIDSPAMPFEQYP 158
Query: 216 L 216
Sbjct: 159 T 159
>gi|153835682|ref|ZP_01988349.1| conserved hypothetical protein [Vibrio harveyi HY01]
gi|148867687|gb|EDL66959.1| conserved hypothetical protein [Vibrio harveyi HY01]
Length = 212
Score = 40.9 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+LY + + +E+ + +GV + I +ETQS ++
Sbjct: 38 EYAAKLYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFAEIAKLAGVPNEAILIETQSSNS 97
Query: 158 FQNAQFSSSMIKNMQGKNI--ILVSSAYHLKRSQLYFQHF 195
+N +F+ ++ ILV + +R+ F+
Sbjct: 98 GENVRFTEQLLIEKGVNCESLILVQKPFMERRAIATFEKQ 137
>gi|297567344|ref|YP_003686316.1| hypothetical protein Mesil_2970 [Meiothermus silvanus DSM 9946]
gi|296851793|gb|ADH64808.1| protein of unknown function DUF218 [Meiothermus silvanus DSM 9946]
Length = 211
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 12/171 (7%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ + P I P R+ L++ T D + +
Sbjct: 45 LEGLRSDPQAAIVPLAGGRERVLYAAALFRQGYGRWFLATD--MPLDAPGIRERYAELVA 102
Query: 136 NKLLESGVERDDIK-LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL---- 190
+ + GV R + + T++ A+ + +++++V+S YH +R++
Sbjct: 103 REAVWQGVPRSAVVLSDLTVRTTYEEAREILKVAHFRGWRSLLVVTSPYHTRRARWVLSE 162
Query: 191 YFQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
F GI + + T EY+ L+ G
Sbjct: 163 VFGTSGIAVHVVAAPEEGYTPQNWWQSVDGLRNTWT---EYLK-LVLRLLG 209
>gi|322420740|ref|YP_004199963.1| hypothetical protein GM18_3250 [Geobacter sp. M18]
gi|320127127|gb|ADW14687.1| protein of unknown function DUF218 [Geobacter sp. M18]
Length = 195
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 35/173 (20%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y+ LSP+ + + IV+L G R+ E +RLY++ + +
Sbjct: 27 YKTFSLSPRDTQ-ADAIVVLTGGR------------------GRVEEGVRLYRAGQGKKL 67
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I + ++ L + S +T +NA ++ +I +
Sbjct: 68 FL-IGVDPSVKKRELFQGDGEGGVYLEQ------------NSRNTLENAIYARDLIMKHK 114
Query: 173 GKNIILVSSAYHLKRSQLYFQHF---GINTKASCSDYLNAYYSIIPLSANFYL 222
++I L++S YH+KRS + F++ + D N S +F L
Sbjct: 115 VRSIKLITSRYHMKRSTILFRNALPRYVAIYPHPVDSSNLKEQWWRHSGSFKL 167
>gi|159027601|emb|CAO86973.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 206
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 61/200 (30%), Gaps = 46/200 (23%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
L + L L+ + +P I +LG
Sbjct: 22 LLAIPLILAGLGWLYLDLRQQWLKP----------EAIFVLGGH---------------- 55
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
R +L K I +S G P++ ++G+ + + L+
Sbjct: 56 --ADRERFAAKLAKEYP----DLPIWVSSGSPRR-------YVQKIFKKAGIPPERLHLD 102
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHFGINTKASCSDYL 207
+ DT N + +K ++ LV+S H++R++L F GI K
Sbjct: 103 YNARDTVTNFTSLADQLKAQGIDSVYLVTSDNHMRRARLVGEIIFGSRGIVIKPVTVPSQ 162
Query: 208 NAYYSIIPLSANFYLTELAL 227
+ PL + A+
Sbjct: 163 SPPE---PLEKSLRDGFRAI 179
>gi|78186865|ref|YP_374908.1| hypothetical protein Plut_1003 [Chlorobium luteolum DSM 273]
gi|78166767|gb|ABB23865.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 196
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 28/212 (13%), Positives = 65/212 (30%), Gaps = 42/212 (19%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ Q ++ + + + G+ + +L + ++IV+LG
Sbjct: 1 MIQLLKTTINILLVAAILAGAGFLSLGFLL-----------SCQAGTPEKTDVIVILGG- 48
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
S R+ + LY++ + T I
Sbjct: 49 ----------------DSGRRVRKGAELYRNGYAPRVILTGIDERYYRPGKLNWRQKRM- 91
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ GV I ++++S T++ A ++ +K K ++VS H+ R + +
Sbjct: 92 ---VALGVPLSAISVDSRSETTWEEAFNTAETMKRNGWKKALVVSDPPHMFRLKSTWMQA 148
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ S I ++ + L
Sbjct: 149 ----------FRKTPRSFILIATSPEWWNPVL 170
>gi|261364900|ref|ZP_05977783.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
gi|288566949|gb|EFC88509.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
Length = 115
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 12/120 (10%)
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G G E+ + +E GV + I+LE S T++N S + K II+
Sbjct: 1 MSGGTDGDGSNEAQTMRDMAVEMGVPSEKIRLEEHSESTYENIVLS--VPKLRDANEIII 58
Query: 179 VSSAYHLKRSQLYFQH--FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
VS A+HL R+ + G + S + +E + + A
Sbjct: 59 VSDAFHLARASWLAKRYWQGKTVELYASGACGD--------STLNYLRKLSREVLAWVKA 110
>gi|269964995|ref|ZP_06179160.1| hypothetical protein VMC_05900 [Vibrio alginolyticus 40B]
gi|269830298|gb|EEZ84523.1| hypothetical protein VMC_05900 [Vibrio alginolyticus 40B]
Length = 118
Score = 40.5 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L+E G+ +D I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 1 MADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 60
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
T + Y PL ++ E +GI R
Sbjct: 61 IASWQTGPQGITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 103
>gi|220908702|ref|YP_002484013.1| hypothetical protein Cyan7425_3327 [Cyanothece sp. PCC 7425]
gi|219865313|gb|ACL45652.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 202
Score = 40.5 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 50/195 (25%), Gaps = 48/195 (24%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RKI F+ + F+ L Y +P I+LL
Sbjct: 2 LRKILFLGFILFWIGFVPLR------LAIAHQQYPQP----------QAILLLEGHRQ-- 43
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
RI + I +G +
Sbjct: 44 ----------------RIPFAAEFWNQHP----TLPIWFTGSRTDRPRN------QRIFQ 77
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF----QHF 195
++GV + I + +S DT N + ++ L++S YH+ R+
Sbjct: 78 QAGVPAEMIHYDRRSTDTVTNFTAIVRDLVRQDIHHVFLITSDYHMPRASAIATLVLGSQ 137
Query: 196 GINTKASCSDYLNAY 210
GI
Sbjct: 138 GIVFTPVSVPTSPPK 152
>gi|224001440|ref|XP_002290392.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973814|gb|EED92144.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 327
Score = 40.5 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 62/154 (40%), Gaps = 14/154 (9%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
++ P + + I+LLG G + P P + ++ +++ ++ + M
Sbjct: 19 FKDPASYTSFLDSLDAILLLGGGVPLSPNEPPVYVQRRCDVVAQLLNMVKQSVNMHDGVM 78
Query: 113 HCTIIISGGDPQKH----------GLAESIVYNNKLL---ESGVERDDIKLETQSLDTFQ 159
++ H L E+ LL + ++ + + +ET S DT
Sbjct: 79 KLPSVVCLSAGTAHLPQFITLDGLPLWEATASAAYLLNHPQYPLQEELVFVETTSYDTIS 138
Query: 160 NAQFSS-SMIKNMQGKNIILVSSAYHLKRSQLYF 192
NA F+ S + +++V++ +H+ RS+ F
Sbjct: 139 NAFFARTSFTDVTGWRRLLVVTNEFHIHRSKAIF 172
>gi|320010228|gb|ADW05078.1| protein of unknown function DUF218 [Streptomyces flavogriseus ATCC
33331]
Length = 217
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P ++ I T+ LY+ + T S + E+ Y
Sbjct: 19 MRHDPQPCSVGIGLGSHDLGVADATVNLYQRGMFPLILFTGATSRTTRDRMPRGEAEHYR 78
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQ 193
+ LE GV I +E ++ +T +N F+ ++ + LVS Y +R+ +
Sbjct: 79 ERALELGVPASAILVEPRARNTGENINFARELLAERSVEVSSVLLVSKPYEERRAYATAR 138
Query: 194 HF 195
Sbjct: 139 RL 140
>gi|320156696|ref|YP_004189075.1| hypothetical protein VVM_03432 [Vibrio vulnificus MO6-24/O]
gi|319932008|gb|ADV86872.1| hypothetical protein VVMO6_01850 [Vibrio vulnificus MO6-24/O]
Length = 212
Score = 40.5 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LYK + + +E+ + SGV + I LET+S ++
Sbjct: 38 EHAANLYKQGYAPYILFSGGEGRFTEGLFEKSEAETFAELAKASGVPAEAILLETKSSNS 97
Query: 158 FQNAQFSSS--MIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+N +FS + K + ++ ILV + +R+ F+
Sbjct: 98 GENVRFSEQLLIDKGLVFESFILVQKPFMERRALATFEKQ 137
>gi|239941429|ref|ZP_04693366.1| hypothetical protein SrosN15_10566 [Streptomyces roseosporus NRRL
15998]
gi|239987894|ref|ZP_04708558.1| hypothetical protein SrosN1_11350 [Streptomyces roseosporus NRRL
11379]
gi|291444872|ref|ZP_06584262.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291347819|gb|EFE74723.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 215
Score = 40.5 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
Y + T S + E++ Y + +E GV + +E ++ +T
Sbjct: 41 DAAAGFYLRGLAPVIVFTGSTSPTTREHMPRGEAVHYRERAVELGVPESAVLVEPKARNT 100
Query: 158 FQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHF--GINTKASCS 204
+N +FS ++++ +++LVS Y +R+ + G++ ++ S
Sbjct: 101 GENIRFSRALLEEAGVDVSSVLLVSKPYEERRAYATARKLWPGVDVVSASS 151
>gi|303242098|ref|ZP_07328589.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
gi|302590392|gb|EFL60149.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
Length = 218
Score = 40.5 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 19/132 (14%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++I++LG+ T + LY + + +
Sbjct: 25 ADLIIVLGSHDTRVAQR-----------------GAELYLKGFAPFIVISGGLGKITKHL 67
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS--SAY 183
+ E+ + GV + I LET+S +T +N F+ +I + +++ Y
Sbjct: 68 WNMTEAEKFAEIACSMGVPEEKIILETRSTNTGENILFTRELILDRNLNINSIITVNKPY 127
Query: 184 HLKRSQLYFQHF 195
+R+ F+ F
Sbjct: 128 MERRTYAAFKKF 139
>gi|27366184|ref|NP_761712.1| hypothetical protein VV1_2906 [Vibrio vulnificus CMCP6]
gi|27362384|gb|AAO11239.1| hypothetical protein VV1_2906 [Vibrio vulnificus CMCP6]
Length = 212
Score = 40.5 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LYK + + +E+ + SGV + I LET+S ++
Sbjct: 38 EHAANLYKQGYAPYILFSGGEGRFTEGLFEKSEAETFAELAKASGVPEEAILLETKSSNS 97
Query: 158 FQNAQFSSS--MIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+N +FS + K + ++ ILV + +R+ F+
Sbjct: 98 GENVRFSEQLLIDKGLVFESFILVQKPFMERRALATFEKQ 137
>gi|281209541|gb|EFA83709.1| hypothetical protein PPL_02776 [Polysphondylium pallidum PN500]
Length = 548
Score = 40.5 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 16/135 (11%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV LG PS R+ + Y + +I SG +
Sbjct: 133 AIVTLGYTLHSD-------GMPSKILKDRVSTAVDAYVQLVNTGSNPLLIFSGKGKTGNN 185
Query: 128 -------LAESIVYNNKLLESG--VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+E+ + L V I L+ S +T +NA + +++ + +
Sbjct: 186 ELDEYEYKSEAAAMKDLALALDDKVLESSIYLDLTSTNTAENALNTLGRLESDGISRVYV 245
Query: 179 VSSAYHLKRSQLYFQ 193
V+S +H+ R+Q FQ
Sbjct: 246 VTSDFHMLRAQYTFQ 260
>gi|302520985|ref|ZP_07273327.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302429880|gb|EFL01696.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 223
Score = 40.5 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 2/119 (1%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LY++ ++ T S E++ ++ L GV + LE ++ +T
Sbjct: 48 TYAADLYRAGLFPTLVFTGGNSSDTLGAFPRGEAVHFHEHALALGVPAHAMLLEPRAANT 107
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
QN F+ + + LV+ Y +R+ F+ + C+ ++ S +
Sbjct: 108 GQNIAFARETLAAAGVRPRSVLLVTMPYMERRAFATFRKQWPEVEVVCASDPLSFDSYL 166
>gi|119493570|ref|ZP_01624235.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
gi|119452624|gb|EAW33806.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
Length = 216
Score = 40.5 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 53/175 (30%), Gaps = 33/175 (18%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
+ L R L+ Q + I++LG P+ +
Sbjct: 15 LGVTSALSVGVALTTLANVISVRSTLALQQTPEPQAILMLGG-------------NPNRE 61
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+ H + +S G ++ ++GV+ + L+
Sbjct: 62 ---------EFTAEFAKKHDHLEVWVSSGVDRRT-------ATEIFQQAGVDLGRVHLDY 105
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY----FQHFGINTKASC 203
+++DT N +K ++ L++S +H+ R+ F GI
Sbjct: 106 RAVDTVTNFSTLVEDLKKRDISHVYLITSDFHMSRAMAIASIVFGSQGIAFTPVP 160
>gi|37679548|ref|NP_934157.1| hypothetical protein VV1364 [Vibrio vulnificus YJ016]
gi|37198292|dbj|BAC94128.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 212
Score = 40.5 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LYK + + +E+ + SGV + I LET+S +T
Sbjct: 38 EHAANLYKQGYAPYILFSGGEGRFTEGLFEKSEAETFAELAKASGVPAEAILLETKSSNT 97
Query: 158 FQNAQFSSSM--IKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+N +FS + K + ++ ILV + +R+ F+
Sbjct: 98 GENVRFSEQLLLEKGLAFESFILVQKPFMERRALATFEKQ 137
>gi|39997331|ref|NP_953282.1| hypothetical protein GSU2233 [Geobacter sulfurreducens PCA]
gi|39984222|gb|AAR35609.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
gi|298506268|gb|ADI84991.1| YdcF-like protein of unknown function DUF218 [Geobacter
sulfurreducens KN400]
Length = 199
Score = 40.5 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 68/198 (34%), Gaps = 31/198 (15%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK-DGNIIVLLGNGTTIIPTIPAIRI 87
+ I I+ I++ L + S + + + IV+L G
Sbjct: 2 ALFFRGIISLLIVVLIIVAVLFVDFAYKTFSLRQRDVTTDAIVVLAGGR----------- 50
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
R+ E +RL++ K ++ + + E D
Sbjct: 51 -------GRVEEGVRLFRERKGTYLYLIGVDPVVKKRDLFRD---------REGERLADR 94
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCS 204
+ LE S +T +NA + +I + ++I L++S YH+KR+ L F+ I
Sbjct: 95 VFLENLSRNTLENALYGREIIMRKEVRSIRLITSRYHMKRATLLFRQVLPRDIAIYPHPV 154
Query: 205 DYLNAYYSIIPLSANFYL 222
D N +F L
Sbjct: 155 DTTNLKERWWDDKGSFRL 172
>gi|302838718|ref|XP_002950917.1| hypothetical protein VOLCADRAFT_104906 [Volvox carteri f.
nagariensis]
gi|300264034|gb|EFJ48232.1| hypothetical protein VOLCADRAFT_104906 [Volvox carteri f.
nagariensis]
Length = 242
Score = 40.1 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 52/142 (36%), Gaps = 14/142 (9%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + + I++L G T +IP R+ + L ++ ++
Sbjct: 72 PLEPYRSLDAIIVLAGGQTGPDSIPKWVER-------RLDTALSLQSLQQKACPILSLGG 124
Query: 119 SGGDPQKHG------LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NM 171
+ + E+ + L G + D + E S DT NA FS ++
Sbjct: 125 GTPHKAPYLDSGGFVIHEATACSRYLTRRGADADLLLKEVSSYDTVGNAYFSLTIHAVPA 184
Query: 172 QGKNIILVSSAYHLKRSQLYFQ 193
+ + +V+S +H+ R+ F
Sbjct: 185 GWRRVGVVTSDFHMPRTAALFN 206
>gi|323154544|gb|EFZ40744.1| sanA [Escherichia coli EPECa14]
Length = 118
Score = 40.1 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 13/99 (13%)
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
++ GV I + T + + + ++S +H +R+ + +GI
Sbjct: 1 MIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHIT---IISQEFHNQRAIWLAKQYGI 57
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + LN + L+E + + A
Sbjct: 58 DAIGFNAPDLNMKHGFYTQ----------LREKLARVSA 86
>gi|255325802|ref|ZP_05366894.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|255297014|gb|EET76339.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
Length = 481
Score = 40.1 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L + FL V+ W L Q+ R+ F++ +LLF I W + +
Sbjct: 246 LLAALFFLAVAQWWLWRQTRRRFNRGFLTASVLLFLAISWVALSNLATWSTGHQGFETAS 305
Query: 59 SPQWKKDGNII 69
P + I
Sbjct: 306 RPWDSLTASRI 316
>gi|67923734|ref|ZP_00517200.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
gi|67854442|gb|EAM49735.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
Length = 197
Score = 40.1 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 62/197 (31%), Gaps = 51/197 (25%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +++F + C + ++G+ K LQ + +P I +LG
Sbjct: 18 RKRKKRLFPILCLATVGLWLGY--------KQLQSHFVQP----------EAIFVLGGHK 59
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
R +L I +S G +
Sbjct: 60 ------------------DRESFAAQLALKHP----DLPIWVSSG-------SPQHYVTQ 90
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY----F 192
+GV D + L+ ++ DT N +K ++ L++S H+ R+++ F
Sbjct: 91 IFSNAGVSGDRLHLDYRAKDTVTNFTSLVKELKEQGIDSVYLITSDNHMNRARIIGEIVF 150
Query: 193 QHFGINTKASCSDYLNA 209
GI K ++
Sbjct: 151 GAQGIILKPLSVPSKDS 167
>gi|145294888|ref|YP_001137709.1| hypothetical protein cgR_0835 [Corynebacterium glutamicum R]
gi|140844808|dbj|BAF53807.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 151
Score = 40.1 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 34/165 (20%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG + + + SR+ + + + + +++S G
Sbjct: 4 IVVLG--------SKVVDGQVTDLLASRLEKAIEVSSMTPE----APVVVS-------GF 44
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L GV I E + T +N + + ++ + +V+S +H R+
Sbjct: 45 GEAAAMADYLRARGV--TTIVEEPWATSTNENLENAHALFPD--TLQWTVVTSGFHAWRT 100
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
L+ H GI K + P + + A++E +
Sbjct: 101 YLWAWHLGIPIKVVTA--------RTPSAERLGM---AMRECFAL 134
>gi|227532864|ref|ZP_03962913.1| transporter [Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227189503|gb|EEI69570.1| transporter [Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 314
Score = 40.1 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + V+LG P +++P+ + R+ ++ + I+ G
Sbjct: 197 PKDSHHYFVVLGYAL-----SPNGKMQPTMK--KRLEIALK-----AAKKYSKSKILVAG 244
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ L E+ V L+ G+ + I+LE S +T +NA FS + + + L++S
Sbjct: 245 GVPENKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVENALFSVRELVDRGATSATLITS 304
Query: 182 AYHLKRSQLY 191
A H++R+ L
Sbjct: 305 ATHMRRAFLL 314
>gi|262394606|ref|YP_003286460.1| hypothetical protein VEA_003835 [Vibrio sp. Ex25]
gi|262338200|gb|ACY51995.1| hypothetical protein VEA_003835 [Vibrio sp. Ex25]
Length = 212
Score = 40.1 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LY + + +E+ + SGV + I LE +S ++
Sbjct: 38 EHAANLYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFAEIAKMSGVPSEAILLEAESTNS 97
Query: 158 FQNAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQHF 195
+N +F+ +K + ILV + +R+ F+
Sbjct: 98 GENVRFTEQRLKEEGKHCSSFILVQKPFMERRAIATFEKQ 137
>gi|119509608|ref|ZP_01628755.1| hypothetical protein N9414_08580 [Nodularia spumigena CCY9414]
gi|119465797|gb|EAW46687.1| hypothetical protein N9414_08580 [Nodularia spumigena CCY9414]
Length = 198
Score = 40.1 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 14/101 (13%)
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY----FQHFGINTKA 201
D I+ + ++ DT N + ++ +++ LV+S YH+ RSQ F GI
Sbjct: 90 DRIQYDNRATDTVTNFTTIVAKVQQNNIRHVYLVTSDYHMPRSQAIATIVFGSQGIAFTP 149
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
++ +P + IG + + R
Sbjct: 150 VSVPSQSSQREALPRISRD----------IGRSVLWLVTGR 180
>gi|78357887|ref|YP_389336.1| hypothetical protein Dde_2846 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220292|gb|ABB39641.1| hypothetical protein Dde_2846 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 280
Score = 40.1 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 33/234 (14%), Positives = 68/234 (29%), Gaps = 32/234 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + R + + F+ + + L + P + +++V+LG G
Sbjct: 63 ISRRQRTLHAVKTFLAVAGAAAILLCVLGAGGLLWIAGNATTEYP--PRKADVMVVLGGG 120
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG---GDPQKHGLAESI 132
R LY ++ + G ++HG
Sbjct: 121 LH------------------RAMFAADLYNRGYAPVVYVSRTRPRREAGVMKQHGYRMPD 162
Query: 133 VYNNK---LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
L + GV DI++ L + + + I + +++V++ H R+
Sbjct: 163 EPEMYVRILTDKGVPMRDIRMYGYDLISTVGEAEALAGILGDRKLTVLVVTAPVHAPRAG 222
Query: 190 LYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ F+H + + S Y L E I L G
Sbjct: 223 MVFRHALPRCSILTAGSPYDPFPQRWWNDQDA---ARNLLLEGIKTLFY-LAGG 272
>gi|213027332|ref|ZP_03341779.1| hypothetical protein Salmonelentericaenterica_35039 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 127
Score = 40.1 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 49/144 (34%), Gaps = 19/144 (13%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + + + + I + + + + ++ G G +
Sbjct: 2 KYRYILRIAAGIILIMAMVFIHNAIAIY-------QFSQQNQTRVADCAIVAGAGVSGK- 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS +R+ + LY+ ++ T G ++++ + +LE
Sbjct: 54 -------TPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGAT----VSDAAIARQYVLE 102
Query: 141 SGVERDDIKLETQSLDTFQNAQFS 164
G+ I +E +S T +N +++
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYA 126
>gi|159029637|emb|CAO87715.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 227
Score = 40.1 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 39/178 (21%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +L+F FI + + ++ S +K + I++LG
Sbjct: 10 RKHRNWQKWLKLTLILVFGFIILNLATNLAIR----------WSINQQKPVDAILVLGGS 59
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
R L K + I+IS G ++
Sbjct: 60 IR------------------REIYVANLAKQYP----NIPILISQG-------SKDPCIL 90
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + ++ LE + TF N F+ ++K + +V+S HL R++ +
Sbjct: 91 LLFERAKAPKTNVWLEKCANSTFGNFFFAVPILKQWGVHKVKVVTSPTHLPRAKWLAE 148
>gi|78223525|ref|YP_385272.1| hypothetical protein Gmet_2322 [Geobacter metallireducens GS-15]
gi|78194780|gb|ABB32547.1| protein of unknown function DUF218 [Geobacter metallireducens
GS-15]
Length = 200
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 31/198 (15%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG-NIIVLLGNGTTIIPTIPAIRI 87
+ +I ++ L + S + + + IV+L G
Sbjct: 2 ALFFRGLFSLLVIFLVVATVLFVDFAYKTFSVRQRDIATDAIVVLAGGR----------- 50
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
R+ E +RL+++ K + + Q+ D
Sbjct: 51 -------GRVEEGIRLFRAKKGKYLFLIGVDPMVRKQELFQERKGESLA---------DR 94
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH---FGINTKASCS 204
+ LE S +T +NA + +I ++I L++S YH+KR+ L F+ I
Sbjct: 95 VVLENASRNTLENALYGREIIDRKDIRSISLITSRYHMKRATLIFRSTLPRDIAIYPHPV 154
Query: 205 DYLNAYYSIIPLSANFYL 222
D +N + +F L
Sbjct: 155 DTINLKEAWWRDQGSFRL 172
>gi|189425340|ref|YP_001952517.1| hypothetical protein Glov_2281 [Geobacter lovleyi SZ]
gi|189421599|gb|ACD95997.1| protein of unknown function DUF218 [Geobacter lovleyi SZ]
Length = 198
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 34/198 (17%)
Query: 45 LLKHLQFSYQRPLLSPQWKK-DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
++ L + S + ++ + IV+L G R+ E +RL
Sbjct: 17 IVTALFVDFTYKTFSARPRQVQADAIVVLAGGK------------------GRVEEGVRL 58
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
++ + + + + D++ LE S +T +NA +
Sbjct: 59 FRERRGTWLFLVGVDPTVRKSDLYRPKPG---------DPPADNVVLEKLSRNTLENAIY 109
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCSDYLNAYYSIIPLSANF 220
++ + ++++L++S YHLKRS + F++ + D N +
Sbjct: 110 GRDILAEHKVRSVLLITSRYHLKRSAILFRNALAPDVALYPYPVDSSNVKEEW---WHHL 166
Query: 221 YLTELALKEYIGILIAYY 238
L E+ I
Sbjct: 167 GTFRLLFSEFYKYCIFRV 184
>gi|301061545|ref|ZP_07202307.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300444353|gb|EFK08356.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 183
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 59/193 (30%), Gaps = 33/193 (17%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK---------QHS 111
+ + + +V+L G P R+ E LY + +
Sbjct: 4 EKPEPSDAVVVLYTGVEYYP---------------RLMEAASLYVKGSVGKAVINGNRKN 48
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL--ETQSLDTFQNAQFSSSMIK 169
I + G K L GV R+DI + DT AQ +
Sbjct: 49 DALRWIETQG--FKRCCPWYEDKFRILGVLGVPREDIVHIGAEDAYDTVSEAQIVGDALI 106
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQ---HFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+ IIL +S +H +R+ ++ ++ + + Y +
Sbjct: 107 RKGYRTIILTTSKFHTRRAAFIWKNMYKDRLSVQIVPA--RTDPYDPAGWWKHGRQIRWV 164
Query: 227 LKEYIGILIAYYR 239
L EY + +++
Sbjct: 165 LAEYGAWVYYWWK 177
>gi|311740951|ref|ZP_07714777.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303987|gb|EFQ80064.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 481
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L + FL V+ W L Q+ R+ F++ +LLF I W + +
Sbjct: 246 LLAALFFLAVAQWWLWRQTRRRFNRGFLTASVLLFLAISWVALSNLATWSTGHQGFETAS 305
Query: 59 SPQWKKDGNII 69
P + I
Sbjct: 306 CPWDSLTASRI 316
>gi|229061085|ref|ZP_04198436.1| hypothetical protein bcere0026_31760 [Bacillus cereus AH603]
gi|228718168|gb|EEL69806.1| hypothetical protein bcere0026_31760 [Bacillus cereus AH603]
Length = 225
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 61/210 (29%), Gaps = 18/210 (8%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ +P + K ++ + L + + I + G P + + +
Sbjct: 6 YPEVPYLTKKQIEEITEIAFLKESTPQQCDAIFVFGGSHPGNWQAPLHAYQHGLGAQIIV 65
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
L+ + L+ES V NKL+E GV D I E SL +
Sbjct: 66 TGGTSLHGMKHP------------NWNYGELSESEVIVNKLIEHGVPEDAIIFEKNSLHS 113
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCSDYLNAYYSII 214
N + + +++ V + R + I D II
Sbjct: 114 IANVIEAKKIFDFKTINSLLFVCKSLGAGRQYRVLKKHLPKHITCIPYTFDTSFDGNFII 173
Query: 215 PLSANFYL---TELALKEYIGILIAYYRGN 241
+ + EY+ + +G
Sbjct: 174 NRYSWMENEKSRSMIFGEYLRNVCYGRKGG 203
>gi|218246780|ref|YP_002372151.1| hypothetical protein PCC8801_1957 [Cyanothece sp. PCC 8801]
gi|257059822|ref|YP_003137710.1| hypothetical protein Cyan8802_1984 [Cyanothece sp. PCC 8802]
gi|218167258|gb|ACK65995.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8801]
gi|256589988|gb|ACV00875.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8802]
Length = 200
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 15/123 (12%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R +L K I +S G P+ ++GVERD + L+ Q+
Sbjct: 60 ERERFAAQLAKDHP----TLPIWVSSGSPKG-------YAKRIFAKAGVERDRLHLDYQA 108
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ----LYFQHFGINTKASCSDYLNAY 210
DT N + K ++ LV+S HL R++ + F GI K +
Sbjct: 109 KDTVTNFTTLVNEFKAQGIDSVYLVTSKNHLPRARVIGEIIFGSQGIVIKPMAVECDRPP 168
Query: 211 YSI 213
Sbjct: 169 EPW 171
>gi|169628110|ref|YP_001701759.1| hypothetical protein MAB_1015c [Mycobacterium abscessus ATCC 19977]
gi|169240077|emb|CAM61105.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 204
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 58/201 (28%), Gaps = 39/201 (19%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R+ + C + G+ Y P P + + IV+LG
Sbjct: 23 PKPRRRRILLVCITVTVLLAGFITAG-------WRVYMNPQTDP--LRPADAIVVLGG-- 71
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
Y R + L K + I S G ++ +
Sbjct: 72 ---------------TPYERFDVGLDLAKRGYAP--YLLISQSTGADDRNMDKYCKGHFT 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF- 195
+ + T AQ S + + +II+++ H+ R++
Sbjct: 115 FTVSCFIP--------DPWTTEGEAQEIRSKAQELGWHHIIVITFTPHVSRARYIVGKCF 166
Query: 196 --GINTKASCSDYLNAYYSII 214
+ AS + A++S +
Sbjct: 167 DGELTMVASPAPSGVAFWSWM 187
>gi|19551945|ref|NP_599947.1| hypothetical protein NCgl0685 [Corynebacterium glutamicum ATCC
13032]
gi|62389604|ref|YP_225006.1| hypothetical protein cg0821 [Corynebacterium glutamicum ATCC 13032]
gi|21323481|dbj|BAB98108.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41324939|emb|CAF19420.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length = 151
Score = 39.8 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 34/165 (20%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG + + + SR+ + + + + + + G
Sbjct: 4 IVVLG--------SKVVDGQVTGLLASRLEKAIEVSSLTPEAPVVVS-----------GF 44
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L GV I E + T +N + + ++ + +V+S +H R+
Sbjct: 45 GEAAAMADYLRARGV--TTIVEEPWATSTNENLENAHALFPD--TLQWTVVTSGFHAWRT 100
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
L+ H GI K + P + + A++E +
Sbjct: 101 YLWAWHLGIPIKVVTA--------RTPSAERLGM---AMRECFAL 134
>gi|118580810|ref|YP_902060.1| hypothetical protein Ppro_2396 [Pelobacter propionicus DSM 2379]
gi|118503520|gb|ABL00003.1| protein of unknown function DUF218 [Pelobacter propionicus DSM
2379]
Length = 198
Score = 39.8 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 30/161 (18%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+L G R+ E +RL++ K H + +
Sbjct: 38 RADAIVVLAGGK------------------GRVDEGVRLFRQGKGHWLFFIGVDPTVRRS 79
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ LE S +T +NA + +I ++I+L++S YH
Sbjct: 80 DLYRPRPG---------DPPASGVILEKASRNTLENAVYGRDVIMERNVRSILLITSRYH 130
Query: 185 LKRSQLYFQHF---GINTKASCSDYLNAYYSIIPLSANFYL 222
+KR+ + ++ + D N + ++F+L
Sbjct: 131 MKRASILLRNALPKDVAIYPYPVDTANLKEAWWSHRSSFHL 171
>gi|227550000|ref|ZP_03980049.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
gi|227077909|gb|EEI15872.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
Length = 159
Score = 39.8 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 34/165 (20%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG I PS +R+ + L++ +++SG
Sbjct: 5 IVVLGARV--------IDGRPSPMLEARLSTALCLWRKDPSR----PVVVSGHHG----- 47
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ V + L GV E + T +N + ++ G + +V+S++H+ R+
Sbjct: 48 -EASVMASWLAAHGVL--AAVEEPAARSTNENLENCHALF---PGTTLTVVTSSFHVLRT 101
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+L+ H GI + + + ++E + +
Sbjct: 102 KLWAWHLGIPVEVVAAPTPPR-----------SRVKNYVREIVAL 135
>gi|328473116|gb|EGF43964.1| hypothetical protein VP10329_20580 [Vibrio parahaemolyticus 10329]
Length = 212
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LY + + +E+ + + +GVE + I LET+S ++
Sbjct: 38 EHAAALYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFADIARLAGVESNAILLETRSTNS 97
Query: 158 FQNAQFSSSMIKNMQGKNIIL--VSSAYHLKRSQLYFQHF 195
+N +F+ ++K + + V + +R+ F+
Sbjct: 98 GENVRFTEQLLKEKGIQCESIILVQKPFMERRAIATFEKQ 137
>gi|307330069|ref|ZP_07609220.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
gi|306884330|gb|EFN15365.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
Length = 225
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ LY+ + T S ++ E++ Y + LE GV + LE + +T
Sbjct: 41 DTAVDLYERGMAPLLVFTGATSPTTRERMPRGEAVHYRERALELGVPSSAVLLEPHARNT 100
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHF 195
+N +FS ++++ L+S Y +RS +
Sbjct: 101 GENIRFSKALLEESGIDVSSVLLISKPYEERRSYATARKL 140
>gi|257095396|ref|YP_003169037.1| hypothetical protein CAP2UW1_3858 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047920|gb|ACV37108.1| protein of unknown function DUF218 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 233
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 46/160 (28%), Gaps = 20/160 (12%)
Query: 96 RIFETMRLYKSCKQHSMHC-TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ ++ ++ S + ++ + + + GV D I +
Sbjct: 56 RVEAAAEYFRRGVAKRINIVQPESSLYEEYGVLRGQAFLARDLAVRLGVPEDRIHIIYGK 115
Query: 155 LDTFQNAQFSSSMIKNMQ-----------GKNIILVSSAYHLKRSQLYFQHF----GINT 199
+ F + + I+LV+ +H R++ F+ GI+
Sbjct: 116 DMARATSSFEEARYHLAYLQAGAPESGTEPRKILLVTDWFHTSRARWIFRRVFAGSGIDV 175
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A+ + A + EY+ +
Sbjct: 176 DAAAARPEWVAKWWTDEYAFIGVFN----EYLKWTYYLLK 211
>gi|91226017|ref|ZP_01260944.1| hypothetical protein V12G01_20121 [Vibrio alginolyticus 12G01]
gi|91189458|gb|EAS75735.1| hypothetical protein V12G01_20121 [Vibrio alginolyticus 12G01]
Length = 199
Score = 39.4 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+LY + + +E+ + SGV + I LET+S ++
Sbjct: 25 EHAAKLYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFAEIAKLSGVPSEAILLETKSTNS 84
Query: 158 FQNAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQHF 195
+N +F+ +K Q + ILV + +R+ F+
Sbjct: 85 GENVRFTEQRLKEEGKQCSSFILVQKPFMERRAIATFEKQ 124
>gi|315445625|ref|YP_004078504.1| hypothetical protein Mspyr1_40830 [Mycobacterium sp. Spyr1]
gi|315263928|gb|ADU00670.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 188
Score = 39.4 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 63/225 (28%), Gaps = 45/225 (20%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R + S L+ G T+L Q + IV+LG
Sbjct: 3 RRRLLIPASMAALVVILFLNGASGTLLFARAQ---------ADPLAKVDAIVVLGGEHDG 53
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
R + L + ++ + + + +
Sbjct: 54 -----------------REAYGVGLAEQGYADTVLLS----------NPYHGTDAVMAEA 86
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ + + I T A + ++ + +II+VS YHL R++ F
Sbjct: 87 CQPRSDIEVICKAPVPGTTRGEALMARALAEARDWNSIIVVSWRYHLPRARKIFN----- 141
Query: 199 TKASCSDYLNAYYSIIPLSANFY---LTELALKEYIGILIAYYRG 240
+ S + +P F L +Y G + A +G
Sbjct: 142 -ECFASPTRSVVMRDVPRDYPFSVAKWQYTYLYQYGGWVKAELQG 185
>gi|307154403|ref|YP_003889787.1| hypothetical protein Cyan7822_4604 [Cyanothece sp. PCC 7822]
gi|306984631|gb|ADN16512.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 229
Score = 39.4 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 43/195 (22%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ L Q R+ FF + + + ++ + ++ L + I
Sbjct: 6 IDLTGRLAQKKRQRFFKLALIAGIALMVISLLFNVAVR----------LPLNSSAPVDGI 55
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG R RL + +IIS G +
Sbjct: 56 LVLGGSIQ------------------REIYAARLTH----LHSNIPVIISTG-------S 86
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ + + + + LE + TF N +S ++++ + +++S HL R++
Sbjct: 87 KDPCIWLLFKRNMAQSNKVILEKCANSTFGNFFYSVPILRHWGVHKVKVITSPSHLPRAK 146
Query: 190 LYFQ----HFGINTK 200
Q GI +
Sbjct: 147 WLAQIHLGAQGIAVE 161
>gi|119512125|ref|ZP_01631217.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
gi|119463215|gb|EAW44160.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
Length = 187
Score = 39.4 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 52/179 (29%), Gaps = 33/179 (18%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ I+ +L L R ++ I+ LG S R
Sbjct: 2 FLILAGFILALLSIIPIRLAIASYQSPHPQAILTLGG------------------SPERE 43
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T K I +S G P K + + + L+ ++DT
Sbjct: 44 EFTAEFAKKHPH----LDIWVSSGIPPK-------QAQAIFQNANISNHRLHLDYLAVDT 92
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF----QHFGINTKASCSDYLNAYYS 212
N K+ ++I L++SAYHL R++ GI S
Sbjct: 93 VTNFTSLVDDFKHNHIQHIYLITSAYHLPRAKAIATLVLGSQGITFTPVPIPSQKPRES 151
>gi|172037429|ref|YP_001803930.1| hypothetical protein cce_2516 [Cyanothece sp. ATCC 51142]
gi|171698883|gb|ACB51864.1| DUF218-containing protein [Cyanothece sp. ATCC 51142]
Length = 197
Score = 39.4 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 61/202 (30%), Gaps = 53/202 (26%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ +++F + C L ++G+ K LQ + +P I +LG
Sbjct: 17 RRKPKKRLFPLLCLATLGLWLGY--------KQLQAYFVQP----------EAIFVLGGH 58
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
R +L I +S G +
Sbjct: 59 E------------------DRERFAAKLALEHP----DLPIWVSSG-------SPQNYVT 89
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY---- 191
+GV D + L+ Q+ DT N K ++ L++S H+ R+++
Sbjct: 90 KIFTSAGVSGDRLHLDYQAKDTVTNFTTLVKEFKAQGIDSVYLITSDNHMNRARIIGEIV 149
Query: 192 FQHFGINTKA--SCSDYLNAYY 211
F GI K SD
Sbjct: 150 FGTQGITLKPLSVPSDDSPEPI 171
>gi|269968725|ref|ZP_06182718.1| hypothetical protein VMC_41480 [Vibrio alginolyticus 40B]
gi|269826652|gb|EEZ80993.1| hypothetical protein VMC_41480 [Vibrio alginolyticus 40B]
Length = 212
Score = 39.4 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+LY + + +E+ + SGV + I LET+S ++
Sbjct: 38 EHAAKLYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFAEIAKLSGVPSEAILLETKSTNS 97
Query: 158 FQNAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQHF 195
+N +F+ +K Q + ILV + +R+ F+
Sbjct: 98 GENVRFTEQRLKEEGKQCSSFILVQKPFMERRAIATFEKQ 137
>gi|303270951|ref|XP_003054837.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462811|gb|EEH60089.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 366
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 22/213 (10%), Positives = 58/213 (27%), Gaps = 57/213 (26%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
Q Y + P + ++ ++LG +P + P +R+ ++L+
Sbjct: 106 WQHDYFAVGVDPCSGAEYDVAIVLG-----HDVMPNGDVSPPL--AARVDAGVKLFCEGT 158
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD--------------------- 147
++ + G A +++ + ++ +
Sbjct: 159 AKNLLFSGASGGDPAATISEANAMMNHALRRAKALKCERPTTPAFKVDTRLYTRGSFLLR 218
Query: 148 -----------------------------IKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+E S T +NA ++ + + +
Sbjct: 219 DSKGNELRMSERHGGCEGQDLDSGCAPFRWVMEESSTSTRENAIYALTECGKRNWTKVAV 278
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
V++ +H R+ F + S N +
Sbjct: 279 VTNRFHQWRADGAFHVVRVEISPIASGMENDPW 311
>gi|162148717|ref|YP_001603178.1| hypothetical protein GDI_2945 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787294|emb|CAP56888.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 170
Score = 39.0 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 13/130 (10%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+V+ G P+ R + ++ + I G
Sbjct: 7 VVIFGAAVRPD-------GTPTATLRHRTEAAIAYGRTLPS-----PLFIPTGGSPDGRP 54
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAYHLKR 187
E+ + + L +GV I +E + DT + +++++ + + V SSAYHL R
Sbjct: 55 TEAALMADLLRAAGVPDRAIVVEDTARDTLDSVLACTALLRARGYRGPVAVASSAYHLPR 114
Query: 188 SQLYFQHFGI 197
+ + G
Sbjct: 115 CLVLMRQAGW 124
>gi|254423350|ref|ZP_05037068.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196190839|gb|EDX85803.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 234
Score = 39.0 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 38/177 (21%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q + ++ S I G+I L YQ+ L+P + ++LG
Sbjct: 40 NQRAGRFLDRLSVLIWISVISAGVIA---LTSAYTRYQQQFLTPP------VALVLGG-- 88
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ R + K+ I IS G +
Sbjct: 89 ----------------APERERFAAQFAKTHP----TVEIWISSG-------SNPEYAQW 121
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
E+ + + L+ +++DT N + + + L++S YH++R+ + Q
Sbjct: 122 IFDEAQIPSEQWSLDYEAVDTVTNFTTLVDELDAQNIREVYLITSDYHMRRASIIAQ 178
>gi|255018930|ref|ZP_05291056.1| hypothetical protein LmonF_16526 [Listeria monocytogenes FSL
F2-515]
Length = 98
Score = 39.0 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 156 DTFQNAQFSSSMIKNMQGKNIILV-SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
+T QN +FS + + + L ++ +HL R+ +Y + G+ ++ +
Sbjct: 1 NTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLYRAGIYARKAGLKSQGIGA---------- 50
Query: 215 PLSANFYLTELALKEYIGILIAY 237
+A +Y+ ++E+I I + Y
Sbjct: 51 -KTALYYMPNALIREFIAITVMY 72
>gi|326803127|ref|YP_004320945.1| hypothetical protein HMPREF9243_0621 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651604|gb|AEA01787.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 190
Score = 39.0 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+ R + ++L K+ +S I+S + + G ER+++ E
Sbjct: 45 AVERAEKAVQLLKA--AYSRAEKNIVSPRYTDVGEDLFAGY-----QQLGAERENLIEEN 97
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
Q+ T+ NA S ++ ++ + I+V+S YH++R++L FQ + Y++AYY
Sbjct: 98 QATSTWTNATTSLDLMDDLGYHSAIVVTSDYHMRRTRLAFQRANRD-YGFQLTYVSAYYQ 156
Query: 213 IIPLSANFYLTELALKEYIGILIAYY 238
P + Y ++AL+E +
Sbjct: 157 GQPYPKHPYTQKMALQELYKYIGYCL 182
>gi|149185075|ref|ZP_01863392.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
gi|148831186|gb|EDL49620.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
Length = 201
Score = 39.0 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 58/165 (35%), Gaps = 35/165 (21%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ +F +G + + +P K + + +++L G
Sbjct: 2 ILRLLAAIFLVYAFGFLGFAMTLP----------APAAKTETDAVIVLTGG--------- 42
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
RI + + + M + + + + AE +++L++ V
Sbjct: 43 ---------PGRIARGLEVVEQNMAKEMFVSGVDPE--VKPNEFAEQFEVSSRLMDCCVT 91
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ ++T+S NA + +K + + LV++ +H+ R+
Sbjct: 92 LGYLAVDTRS-----NAGEVAQWMKEKEFTSARLVTTNWHMARAY 131
>gi|295837325|ref|ZP_06824258.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295826488|gb|EFG64899.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 223
Score = 39.0 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 9/144 (6%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
LY++ + T S E++ ++ L GV + LE ++ +T
Sbjct: 49 HAAHLYRAGLFPVLVFTGGNSSDTLGVFPRGEAVHFHEHALALGVPAHAMLLEPKAANTG 108
Query: 159 QNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
QN F+ + + LV+ Y +R+ F+ + C+ ++ S +
Sbjct: 109 QNIAFARETLTAADVRARSVPLVTMPYMERRAFATFRKQWPEVEVVCASDPLSFDSYLKA 168
Query: 217 SANFYLTELA-------LKEYIGI 233
+ + ++EY +
Sbjct: 169 MGDERMVISMMVGDLQRVREYPAL 192
>gi|328952863|ref|YP_004370197.1| protein of unknown function DUF218 [Desulfobacca acetoxidans DSM
11109]
gi|328453187|gb|AEB09016.1| protein of unknown function DUF218 [Desulfobacca acetoxidans DSM
11109]
Length = 202
Score = 39.0 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 60/200 (30%), Gaps = 33/200 (16%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ I+++G + P + R+ + L S
Sbjct: 7 SNLSTPESKSHTLDAIIIVGA-------LVGRDGHPGRVARFRLHHALPLVVETYPESW- 58
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVER----------DDIKLETQSLDTFQNAQF 163
++I+GG E+ + L V + LE SL T ++A+
Sbjct: 59 --VVITGGLWPGRPATEARAMADWALGQAVRHWGEACGRKLEQRLILEEVSLSTVESARH 116
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYF------QHFGINTKASCSDYLNAYYSIIPLS 217
++ +++ LV+ H+ R+ F + I +
Sbjct: 117 TAVLLQQRGLMAAGLVTDELHMPRAAYLFRRSFRARRLTIRLLPA----RGLLVDYWQRR 172
Query: 218 ANFYLTELALKE---YIGIL 234
LT+ L+E ++ +
Sbjct: 173 RYVRLTKFILREGGAWMKLW 192
>gi|146309298|ref|YP_001189763.1| lipopolysaccharide biosynthesis protein [Pseudomonas mendocina ymp]
gi|145577499|gb|ABP87031.1| lipopolysaccharide biosynthesis protein [Pseudomonas mendocina ymp]
Length = 664
Score = 39.0 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 57/197 (28%), Gaps = 13/197 (6%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++ + + + + + ++L + L + P D
Sbjct: 10 LLRLFFIFFREFKLAVIATLVVVLLGAFLLPTSYESSARLLIKPGRETSTLPIEMADRQA 69
Query: 69 IVLLGNGTTIIPTIPAIRI--EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
IV+ G I + S Q R E +L + K I G
Sbjct: 70 IVMPGAMRDPILDEERMLTGRPISRQVAERYLE--QLANAPKPDGFFAAIKYGVGQVANG 127
Query: 127 GLAESIVYNNK--LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----IILVS 180
+ + L E D + + + + +A SS M + + + +V
Sbjct: 128 AVELVRGFLQLIGLTEKQTPVDRLATKLEKKFSVTHASGSSVMEISFRWSDPVVAQAVVQ 187
Query: 181 SA---YHLKRSQLYFQH 194
S Y +R++ +
Sbjct: 188 SWVELYMQERTRALGRK 204
>gi|126654814|ref|ZP_01726348.1| hypothetical protein CY0110_10272 [Cyanothece sp. CCY0110]
gi|126623549|gb|EAZ94253.1| hypothetical protein CY0110_10272 [Cyanothece sp. CCY0110]
Length = 198
Score = 39.0 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 63/202 (31%), Gaps = 53/202 (26%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ ++ F + C L ++G+ K LQ + +P I +LG
Sbjct: 17 RRKYKKRFFPLLCLATLGLWLGY--------KQLQSYFAQP----------EAIFVLGGH 58
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
R +L + I +S G +
Sbjct: 59 E------------------DRERFAAKLALEHP----NLPIWVSSG-------SPENYVT 89
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY---- 191
+G+ D + L+ Q+ DT N +K+ ++ L++S H+ R+++
Sbjct: 90 KIFTNAGISGDRLHLDYQAKDTVTNFTTLVKELKDQGIDSVYLITSDNHMNRARIIGEIV 149
Query: 192 FQHFGINTKA--SCSDYLNAYY 211
F GI K SD
Sbjct: 150 FGTQGITLKPLSVPSDDSPEPI 171
>gi|113476034|ref|YP_722095.1| hypothetical protein Tery_2404 [Trichodesmium erythraeum IMS101]
gi|110167082|gb|ABG51622.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 226
Score = 39.0 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 11/125 (8%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV P S R ++ K I+IS G
Sbjct: 24 IVGNTISLNSAAKAPVDAYLVLGGSIKREIYITQVAKQYPH----IPILISAG------- 72
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
++ V D + LE + TF N F+ +++ ++I LV+S HL R+
Sbjct: 73 SKDPCIVKLFQRENVPLDGVWLEHCAKSTFSNFFFTMPILEEWGVQHIKLVTSPSHLPRA 132
Query: 189 QLYFQ 193
+ Q
Sbjct: 133 KWLAQ 137
>gi|15673711|ref|NP_267885.1| hypothetical protein L169301 [Lactococcus lactis subsp. lactis
Il1403]
gi|12724748|gb|AAK05827.1|AE006403_5 hypothetical protein L169301 [Lactococcus lactis subsp. lactis
Il1403]
gi|326407195|gb|ADZ64266.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 361
Score = 38.6 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 82/248 (33%), Gaps = 56/248 (22%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGII------------PTILLKHLQFSYQRPLLSPQW---- 62
R+ + +L + + ++ I LK L Y + W
Sbjct: 108 WRRESKSIGNLLLAIVVLTFLVVDWIHLSMGRLPDSWIWLKILGMVYPILSIYLAWQFGI 167
Query: 63 -------------KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
K+ N V+LG G + + +RI ++ + +
Sbjct: 168 FFLSSWVYGRRVRKQRANYYVVLGAGLIQGEHVGKL-------LGNRILAAVKAVRDNET 220
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMI 168
++ SGG ++E+ +E G + LE QS T++N FSS +I
Sbjct: 221 I-----LVFSGGQGPDEKVSEARAMQRYAVEVLGFPIERTMLEDQSRTTYENLFFSSQLI 275
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+ +S YH+ R+ L+ + + +A +Y ++
Sbjct: 276 REKFL----FFTSDYHVFRAALFAAMLKLEAQG----------GKGGKTAMYYRVPAFIR 321
Query: 229 EYIGILIA 236
E+I +L
Sbjct: 322 EFIAVLNY 329
>gi|330976847|gb|EGH76878.1| hypothetical protein PSYAP_09345 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 66
Score = 38.6 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 184 HLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R++ F+ G + +L + +P S F + + L E G+L+
Sbjct: 1 HMPRARWSFEQAGFKVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 58
>gi|290559808|gb|EFD93132.1| hypothetical protein BJBARM5_0144 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 184
Score = 38.6 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 57/178 (32%), Gaps = 32/178 (17%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG R+ + + L KQ +I
Sbjct: 13 AIVVLGGSCDRFK--------------KRLEKGIEL---QKQQKEALLLIAGQNIHSNDD 55
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSL-------DTFQNAQFSSSMIKNMQGKNIILVS 180
L + N + + + + + +S+ N +++ +V+
Sbjct: 56 LMNMLSGNEDFIYENQSINTLDNAENAYMMLKAINKNQMDNSLYNSLQYNGGVRDVYIVT 115
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H+ R++ YF+ +++ + S IP N L + + E G L+++
Sbjct: 116 DTLHMIRAKRYFKR------TFDTEFELHFNS-IPEDQN-DLPKKIIYELSGYLVSFL 165
>gi|290558827|gb|EFD92220.1| protein of unknown function DUF218 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 184
Score = 38.6 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 57/178 (32%), Gaps = 32/178 (17%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG R+ + + L KQ +I
Sbjct: 13 AIVVLGGSCDRFK--------------KRLEKGIEL---QKQQKEALLLIAGQNIHSNDD 55
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSL-------DTFQNAQFSSSMIKNMQGKNIILVS 180
L + N + + + + + +S+ N +++ +V+
Sbjct: 56 LMNMLSGNEDFIYENQSINTLDNAENAYMMLKAINKNQMDNSLYNSLQYNGGVRDVYIVT 115
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H+ R++ YF+ +++ + S IP N L + + E G L+++
Sbjct: 116 DTLHMIRAKRYFKR------TFDTEFELHFNS-IPEDQN-DLPKKIIYELSGYLVSFL 165
>gi|117924002|ref|YP_864619.1| hypothetical protein Mmc1_0692 [Magnetococcus sp. MC-1]
gi|117607758|gb|ABK43213.1| protein of unknown function DUF218 [Magnetococcus sp. MC-1]
Length = 229
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 68/226 (30%), Gaps = 36/226 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L S R I + +LL GW + + L+ Q + IV+LG G
Sbjct: 24 LKSSRRAIAYTLTTLLLVPLFGWIGLGGW------KQAAQWLVITQPPAVADAIVVLGGG 77
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P + +L + + V +
Sbjct: 78 IPTRPKM-----------------GFQLLHQGWAKRLIFVG--------DRPHVLTQVGH 112
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH- 194
+ R ++ L S T + Q I+ + I+LV+ YH +R+ +H
Sbjct: 113 SYCPACDFARPEVTLLGLSRSTLDDLQRVLPHIQGGLNRRILLVTDPYHTRRADWIARHL 172
Query: 195 ---FGINTKASCSD-YLNAYYSIIPLSANFYLTELALKEYIGILIA 236
GI + S+ Y P + ++ L E+ L
Sbjct: 173 LNQHGIEVRTISSNAYFKMNAPQTPWWQDLPTRQVVLSEWTKFLFY 218
>gi|296139977|ref|YP_003647220.1| hypothetical protein Tpau_2273 [Tsukamurella paurometabola DSM
20162]
gi|296028111|gb|ADG78881.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 188
Score = 38.6 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 27/144 (18%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+Y RP + + + IV+LG Y R + L +
Sbjct: 32 RAYIRPR-TIDELRPADAIVVLGG-----------------NPYDRFEYGITLAERGLAP 73
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ + + D + E + T AQ + +
Sbjct: 74 QVVLSNSVGAQDSR---------MQQLCDERVPDVQVTCFLPVPWTTRGEAQELRRLAQE 124
Query: 171 MQGKNIILVSSAYHLKRSQLYFQH 194
+ II+V++ H++R++ +
Sbjct: 125 RRWDEIIVVTTTAHVERARFILER 148
>gi|209545516|ref|YP_002277745.1| hypothetical protein Gdia_3404 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209533193|gb|ACI53130.1| protein of unknown function DUF218 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 170
Score = 38.2 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 13/130 (10%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+V+ G P+ R + ++ + I G
Sbjct: 7 VVIFGAAVRPD-------GTPTATLRYRTEAAIAYGRTLPS-----PLFIPTGGSPDGRP 54
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAYHLKR 187
E+ + + L +GV I +E + DT + +++++ + + V SSAYHL R
Sbjct: 55 TEAALMADLLRAAGVPDRAIVVEDTARDTLDSVLACTALLRARGCRGPVAVASSAYHLPR 114
Query: 188 SQLYFQHFGI 197
+ + G
Sbjct: 115 CLVLMRQAGW 124
>gi|56965774|ref|YP_177508.1| hypothetical protein ABC4016 [Bacillus clausii KSM-K16]
gi|56912020|dbj|BAD66547.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 201
Score = 38.2 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + + LYK + + + +S + E+++ K L G+ DI +E +SL
Sbjct: 46 RVPKAVDLYKQGRARKLLFSGGVS---WDETKTPEAVLMKAKALSLGIAAKDILVEDRSL 102
Query: 156 DTFQNAQFS----SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLN 208
T +N S I + K ++LV+++YH+ R L + + I D
Sbjct: 103 HTKENVLASLLVLDRAIDLHRIKRLLLVTASYHMPRVYLMMRTYMPSWIEYSLCPVDDKT 162
Query: 209 A 209
Sbjct: 163 T 163
>gi|209519679|ref|ZP_03268468.1| transcriptional regulator, AraC family [Burkholderia sp. H160]
gi|209499896|gb|EDZ99962.1| transcriptional regulator, AraC family [Burkholderia sp. H160]
Length = 311
Score = 38.2 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 57/177 (32%), Gaps = 7/177 (3%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P + +++ G + + + SR ++ C +
Sbjct: 56 ATQPLGDPAYDTVIVTGAMEIAPSSPGLLAFLNDALAASRRTASI-----CTGAFVLAEA 110
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I G A + + + V+ D I + S+ T + + ++
Sbjct: 111 GILDGRHATTHWAHARDLQRRFPRARVDEDRIFIVDGSVWTSAGMTACIDLCLALVENDL 170
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +S K+ +Y + G ++ S L I + ++ + L+E +G+
Sbjct: 171 GVAASRAIAKKLVVYHRRTGGQSQYSAMLDLEPKSDRIQNALSYAKSH--LREPLGV 225
>gi|329930281|ref|ZP_08283883.1| hypothetical protein HMPREF9412_2885 [Paenibacillus sp. HGF5]
gi|328935150|gb|EGG31634.1| hypothetical protein HMPREF9412_2885 [Paenibacillus sp. HGF5]
Length = 202
Score = 38.2 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Query: 70 VLLGNGTTIIPTIPAIR--IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
++ G + ++ R+++ + LY + + T G+
Sbjct: 19 LVFGTVEEVDDGRQTGDCIFVFGGRNLDRVWKAVELYNIGRAPYILFTGGDRFGEW---E 75
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN----MQGKNIILVSSAY 183
E+ + ++ + G+ + I +ET S T +N S ++ + + I+LVS+
Sbjct: 76 QTEAAMMRDEAMRMGIPAEAILMETMSNHTKENIMASLIVLDRALGLERIQRILLVSAPG 135
Query: 184 HLKRSQLYFQHF 195
H++R QL + F
Sbjct: 136 HMRRCQLMLKTF 147
>gi|48477095|ref|YP_022801.1| hypothetical protein PTO0023 [Picrophilus torridus DSM 9790]
gi|48429743|gb|AAT42608.1| conserved hypothetical protein [Picrophilus torridus DSM 9790]
Length = 168
Score = 38.2 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 16/131 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+I+++LG I R L K + + I+ +
Sbjct: 2 DILIVLGCRLDKNCHGDEIT--------ERAKRGAMLLKEHPEAVAIASGGITNIKCRSE 53
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYH 184
+ V + ++ DI LE +S T NA + ++K + I +V+S YH
Sbjct: 54 ASFIADV-----INHSID-KDIILEERSTSTIGNAFSTGILLKEYKIDVSRIYIVTSCYH 107
Query: 185 LKRSQLYFQHF 195
+KR+ + F F
Sbjct: 108 VKRALMIFSKF 118
>gi|153845282|ref|ZP_01993757.1| SanA protein [Vibrio parahaemolyticus AQ3810]
gi|149745126|gb|EDM56377.1| SanA protein [Vibrio parahaemolyticus AQ3810]
Length = 90
Score = 38.2 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++V+ +H +R+ + I+ + A N T + ++E + + A
Sbjct: 1 MIVTQRFHCERALFIADAYNIDAQCLAVAGPTA---------NKQKTSMRIRELLARVKA 51
Query: 237 YY 238
+
Sbjct: 52 FL 53
>gi|170078127|ref|YP_001734765.1| hypothetical protein SYNPCC7002_A1518 [Synechococcus sp. PCC 7002]
gi|169885796|gb|ACA99509.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 139
Score = 38.2 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
++ + + + ++ +++DT N + +++ L++S +H++R+Q
Sbjct: 8 PQATAIFQQAAIPENRLHIDHRAIDTVTNFTTLVKDFSDRHIQHVYLITSDFHMRRAQAI 67
Query: 192 ----FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
F GI T ++ +S + L +
Sbjct: 68 AFFVFGSRGIITTPIPIPSNQPNETLWHVSRDIGRAILWI 107
>gi|223041330|ref|ZP_03611564.1| hypothetical protein CAMRE0001_1059 [Campylobacter rectus RM3267]
gi|222877407|gb|EEF12554.1| hypothetical protein CAMRE0001_1059 [Campylobacter rectus RM3267]
Length = 353
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 28/68 (41%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L++ IFLIVS++ L K + F F G ++ ++ + F Y + +
Sbjct: 17 LLIALIFLIVSFFVALIAPKGKRKLLWLFAWFMVFFGDIVVLKAIMAYYDFKYAKISVHE 76
Query: 61 QWKKDGNI 68
+
Sbjct: 77 KPAIHAYY 84
>gi|325110724|ref|YP_004271792.1| hypothetical protein Plabr_4196 [Planctomyces brasiliensis DSM
5305]
gi|324970992|gb|ADY61770.1| protein of unknown function DUF218 [Planctomyces brasiliensis DSM
5305]
Length = 218
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 57/225 (25%), Gaps = 37/225 (16%)
Query: 21 RKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
I + +L+ + I +L + K + + +LG G
Sbjct: 18 WVIALSTVCILIAILYASAPAIARKAGHYL-------NVGKPLNKRVDFVFILGGGAN-- 68
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
R +YK+ + D E+ + + L
Sbjct: 69 ---------------DRPIVAAEIYKAGFADRILIASPEFLPDTPHEARTEADLVRSMLT 113
Query: 140 ESGVERDDIKL-ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--- 195
V + ++ T + + +V+ YH +R +L
Sbjct: 114 WENVPLEALEQLTLPEPSTRGEILALKEYMAEHALQQGAIVTHNYHTRRVRLLVTSLMQE 173
Query: 196 ----GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+N + +D + S E++ + A
Sbjct: 174 DMSSRLNYVSCPTDGFSPDNWWKFESG----LRTYWLEFVKYVAA 214
>gi|322709982|gb|EFZ01557.1| hypothetical protein MAA_02786 [Metarhizium anisopliae ARSEF 23]
Length = 225
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 2/124 (1%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+LY + + + E+ + + GV D + +E ++ +T
Sbjct: 42 RRAAQLYLDGLAPMLIFSGASGQLTAGRFAKTEAETFADVARAMGVPGDRVVVEPRATNT 101
Query: 158 FQNAQFSSSMIKNMQGKNI--ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
+N +F+ ++++ M + ILV Y +R+ F+ + + P
Sbjct: 102 GENVRFTHALLQGMGLRPESLILVQKPYMERRTYATFRKQWPGETSFAVTSPQFTFEEYP 161
Query: 216 LSAN 219
+ N
Sbjct: 162 DADN 165
>gi|254409533|ref|ZP_05023314.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183530|gb|EDX78513.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 206
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 32/97 (32%), Gaps = 4/97 (4%)
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D + V + + + L+ +++DT N + K ++I L++S
Sbjct: 57 DIWVSSGSPPDVLYAIFQNANIPIQRVHLDYRAVDTVTNFTSLVADFKRRNIQHIYLITS 116
Query: 182 AYHLKRSQLYF----QHFGINTKASCSDYLNAYYSII 214
YH+ R++ I S +
Sbjct: 117 DYHIPRAKAIAILVLGSQSITFTPVAVPSNQPPESWL 153
>gi|296137799|ref|YP_003645042.1| hypothetical protein Tpau_0049 [Tsukamurella paurometabola DSM
20162]
gi|296025933|gb|ADG76703.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 185
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 61/213 (28%), Gaps = 45/213 (21%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ F+ + +G+ + L+ + +V+LG
Sbjct: 9 WSTAVLVVVFLGAVAAVGYPVFGQAKQDPLE--------------RVDAVVVLGGEHDG- 53
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
R ++L K ++ + + V
Sbjct: 54 ----------------REQYGLQLAKEGYAPTLVLS---------NPYEPDDHVMAPLCD 88
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH--FG- 196
+ + T A F+ + + K +I+VS YHL RS+ F + G
Sbjct: 89 RRVDGIEVLCEVPDPSTTRGEALFTERLARERGWKKVIVVSWRYHLPRSRYIFGNCFAGE 148
Query: 197 --INTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ + A + +I L +F + + +
Sbjct: 149 TVMRAVPREYAFGPADWELIYLYQSFAMAKAMV 181
>gi|223040816|ref|ZP_03611082.1| hypothetical protein CAMRE0001_3096 [Campylobacter rectus RM3267]
gi|222877915|gb|EEF13030.1| hypothetical protein CAMRE0001_3096 [Campylobacter rectus RM3267]
Length = 354
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 29/68 (42%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L++ IFLIVS++ L K + F+ F I+ +++ + F Y + +
Sbjct: 18 LLIALIFLIVSFFVALIALKGKRKLLWLFVWFMVFFSDFILLRVVMAYYDFKYAKISVHE 77
Query: 61 QWKKDGNI 68
+
Sbjct: 78 KPAIRAYY 85
>gi|166368729|ref|YP_001661002.1| hypothetical protein MAE_59880 [Microcystis aeruginosa NIES-843]
gi|166091102|dbj|BAG05810.1| hypothetical protein MAE_59880 [Microcystis aeruginosa NIES-843]
Length = 227
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 68/219 (31%), Gaps = 50/219 (22%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +L+F FI + + + ++ L +K + I++LG
Sbjct: 10 RKHRHWQRWLKLTPILVFGFIIFNLAINLAIR----------LPINQQKPVDAILVLGGS 59
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
R L + I+IS G ++
Sbjct: 60 IR------------------REIYVANLAQQYP----DIPILISQG-------SKDPCIL 90
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF--- 192
+ + ++ LE + TF N F+ ++K + +V+S HL R++
Sbjct: 91 LLFERAKAPKTNVWLEKCADSTFGNFFFAVPILKQWGVHKVKVVTSPTHLPRAKWLAAIH 150
Query: 193 -QHFGINT-------KASCSDYLNAYYSIIPLSANFYLT 223
Q GI ++ + + + ++ +
Sbjct: 151 LQSHGIAVEIDAVREIGIPGNHESKLKTGLDVTRSIIWA 189
>gi|306836970|ref|ZP_07469920.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304567153|gb|EFM42768.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 481
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L + FLIV+ W L Q+ R+ F++ +LLF I W + +
Sbjct: 246 LLAAVFFLIVAQWWLWRQTRRRFNRGFLTATVLLFLAIFWVALSNLATWSTGHQGFETAS 305
Query: 59 SPQWKKDGNII 69
P + I
Sbjct: 306 RPWDSLTASRI 316
>gi|300784315|ref|YP_003764606.1| hypothetical protein AMED_2408 [Amycolatopsis mediterranei U32]
gi|299793829|gb|ADJ44204.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 223
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T L+ + + T + ++ E++ Y L+ GV + I +E ++ T
Sbjct: 41 VHTAELFHAGCFPLIVFTGANAPTTLERFPRGEAVHYREIALDLGVPDEAILVEPEARHT 100
Query: 158 FQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHF 195
+N F+ ++ + + LVS Y +R+ +
Sbjct: 101 GENIAFTRRLLAERGIAVRTVTLVSRPYQQRRAYATAKRL 140
>gi|227505407|ref|ZP_03935456.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
gi|227198003|gb|EEI78051.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
Length = 133
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
G E+ V L+ GV ++I +E + T +N + S ++ + +V+S +H
Sbjct: 22 GRGEAEVMEAYLIGRGVPAENIIVEPNATSTNENLENSHALYRA---PYFDVVTSDFHAL 78
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
R++L+ H GI + + P E L+E +
Sbjct: 79 RTKLWSWHLGI---PVRVHSAFTPWELKP--------ENYLREVLA 113
>gi|288923137|ref|ZP_06417284.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
gi|288345508|gb|EFC79890.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
Length = 220
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 2/122 (1%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P I + S LY + T + E++ Y
Sbjct: 24 LHHDPQPTDIGVGLGSHDLSVATCAAALYHRGLFPRIVFTGANAPTTIDTFPRGEAVHYR 83
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI--ILVSSAYHLKRSQLYFQ 193
L V I +ET + +T +N + ++ L+S Y +R+ +
Sbjct: 84 EHALTLHVPDAAILIETTARNTGENITRTRDLLTTHGITPRSVTLISRPYQQRRAYATCR 143
Query: 194 HF 195
Sbjct: 144 KL 145
>gi|89514136|gb|ABD74926.1| hypothetical protein [Sinorhizobium fredii]
Length = 151
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 9/111 (8%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKL-LESG 142
+ + +S R+ +R K+ +I++ G P + LA + + E
Sbjct: 8 QGVLNDESRERMATAVRALKAGMA-----PLILACGWPYRDDSDLAIADAMASFATEELQ 62
Query: 143 VERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVSSAYHLKRSQLYF 192
V+ D + +E S DT +A FS K I+ V+S+YH R+ F
Sbjct: 63 VDSDKVLVERTSRDTVGDAVFSKRNFAIPFGWKRILTVTSSYHQARTLAIF 113
>gi|1161522|emb|CAA87766.1| SanA [Escherichia coli K-12]
Length = 180
Score = 37.8 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 8/117 (6%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + RI + Y S K + + + GD E +
Sbjct: 48 GVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLS-----GDNALQSYNEPMTM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ +GV+ DI L+ T + + + I+++ +H +R+
Sbjct: 103 RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFM 156
>gi|294085432|ref|YP_003552192.1| hypothetical protein SAR116_1865 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665007|gb|ADE40108.1| protein of unknown function DUF218 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 207
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 70/226 (30%), Gaps = 36/226 (15%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
++ + C ++ F + L R + IV+
Sbjct: 10 LASRLRNRETALTVICILVAFMLASFQHFVLTL--------PRGETDFTKLDHTDGIVVT 61
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G R+ E + L S + + + G+ +++
Sbjct: 62 TGGQQ------------------RLVEGLNLLVSGTTDKVLISGV-------GKGVNKAV 96
Query: 133 VYNNK-LLESGVE--RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ L + V ++LE +LDT NA + + I K+I LV++ YH+ R++
Sbjct: 97 LVQELNLDDQQVSALFCCVELEYGALDTRGNALAARAWIDLNGLKSIRLVTANYHMPRAE 156
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ F N + + + L +EY +
Sbjct: 157 IVFSRAIPNVDIHQWAVSPNALDVERWWQDPMIIRLLTREYAKYVA 202
>gi|296536740|ref|ZP_06898797.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262933|gb|EFH09501.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 200
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 40/208 (19%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
LL + + ++ L Q + + I +L G
Sbjct: 15 LWLLPALLAILVVAGFALFTGQSR----ARPELPLRQTDGIAVLTGG------------- 57
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
R+ +RL ++ + +G D LA + L E +
Sbjct: 58 -----PQRVDAGLRLLAEGHARALIISG--TGRDATLEELARRAGLPDPLPEGF--AARV 108
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDY 206
L ++ T N Q + + Q ++ +V++A+H+ R+ L + G+
Sbjct: 109 TLGREATSTRGNGQEVAEWAEARQIGSLRVVTAAFHMPRALLELRRTLPGVALVPHPVQA 168
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGIL 234
++ L+EY +
Sbjct: 169 AGPRPGLL------------LREYGKFI 184
>gi|255321643|ref|ZP_05362800.1| hypothetical protein CAMSH0001_0021 [Campylobacter showae RM3277]
gi|255301291|gb|EET80551.1| hypothetical protein CAMSH0001_0021 [Campylobacter showae RM3277]
Length = 348
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 26/68 (38%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L++ +FLIVS++ L K + F+ F I + + + Y + +
Sbjct: 7 LLIALVFLIVSFFVALIAPKGKRKLLWLFVWFLVFFADVFITSAIFHYYGNLYGKINVYE 66
Query: 61 QWKKDGNI 68
G
Sbjct: 67 NPASRGYY 74
>gi|75906523|ref|YP_320819.1| hypothetical protein Ava_0298 [Anabaena variabilis ATCC 29413]
gi|75700248|gb|ABA19924.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 232
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 54/176 (30%), Gaps = 41/176 (23%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ +L GW II TI L + + +LG
Sbjct: 18 RKKWRLIQKLVGVLCLVLGGWLIITTI------------TLVFASSQPPDAFFVLGGSIR 65
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
R ++ K Q I+IS G +
Sbjct: 66 ------------------REIYIAQIAKQYPQ----IPILISQG-------SPDPCIKLI 96
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ ++ LE + TF+N + ++K+ + L++S HL R++ Q
Sbjct: 97 FEREAADLSNVWLEKCANSTFENFYYGVPILKSWGVHKVRLITSPTHLPRAKWMAQ 152
>gi|323136484|ref|ZP_08071566.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322398558|gb|EFY01078.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 225
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 52/150 (34%), Gaps = 8/150 (5%)
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ + + M T + S++ + + + L
Sbjct: 61 TGGSDRVLDAADFLARGQAKRMLITGV-------NRATRSSVLARILPVSRDLFNCCVDL 113
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILV-SSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
Q++DT NA+ + ++ ++V +S YH+ R+ + + K ++
Sbjct: 114 GYQAMDTAGNARETREWAQSRNITRSLIVVTSNYHMPRALVELSAALPDIKLYPFPVVSE 173
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + + + L EY+ L A R
Sbjct: 174 HVDVADWATDLGVARLVGSEYVKFLGALLR 203
>gi|85710207|ref|ZP_01041272.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
gi|85688917|gb|EAQ28921.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
Length = 178
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 69/218 (31%), Gaps = 47/218 (21%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I ++ +L +G+ L + + + +++ G
Sbjct: 4 IRYLLAASVLVWALGFFWFAAALPQPAEE------------LSTDAVIVPTGG------- 44
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + +++ + + M T + + ++
Sbjct: 45 -----------PGRIAQGLQVLEQGQAQRMLVTGV-------DPEVTRDEFAAEFEVDEA 86
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I L ++++DT NA ++ + ++ LV++ +H++R+ S
Sbjct: 87 RMDCCITLGSEAVDTRSNATETAEWVAANDITSLRLVTTDWHMRRAAGELDRE----LPS 142
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ P A+ +L EY ++ ++ G
Sbjct: 143 SVTVVRDAVPSQPSLASLFL------EYHKLIASFIAG 174
>gi|227502019|ref|ZP_03932068.1| secreted protein [Corynebacterium accolens ATCC 49725]
gi|227077303|gb|EEI15266.1| secreted protein [Corynebacterium accolens ATCC 49725]
Length = 481
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L + FLIV+ W L Q+ R+ F++ +LLF + W + +
Sbjct: 246 LLAAVFFLIVAQWWLWRQTRRRFNRGFLTATVLLFLAVFWVALSNLATWSTGHQGFETAS 305
Query: 59 SPQWKKDGNII 69
P + I
Sbjct: 306 RPWDSLTASRI 316
>gi|296283193|ref|ZP_06861191.1| hypothetical protein CbatJ_06211 [Citromicrobium bathyomarinum
JL354]
Length = 176
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 53/173 (30%), Gaps = 37/173 (21%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I+ + ++L +G+ L P + + +++
Sbjct: 2 IWRVGLAIVLVWVLGFIWFAGWL------------PGPAPMERTDAVIVPTG-------- 41
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + + ++ ++ T + + +
Sbjct: 42 ----------YAGRIERGLEVVQTDSADTLLVTGV-------DPEVKPGEFAAQFKVPED 84
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
V + L + DT NAQ + + K++ LV+S +H++R+ +
Sbjct: 85 VMECCVTLGFAATDTRGNAQETREWAEAHGIKSLRLVTSDWHMRRAATELRRQ 137
>gi|257061632|ref|YP_003139520.1| hypothetical protein Cyan8802_3881 [Cyanothece sp. PCC 8802]
gi|256591798|gb|ACV02685.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8802]
Length = 232
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 40/177 (22%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
L K + I++LG T R +L + II
Sbjct: 44 LPINSTKPVDGILVLGGSVT------------------REIYAAQLRHQLPE----IPII 81
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
IS G +E + LE + TF+N FS +++ ++ +
Sbjct: 82 ISQG-------SEDPCILLIFQRYQAPLQRVWLENCANSTFENFFFSVPLLRRLRVHKVK 134
Query: 178 LVSSAYHLKRSQLYFQ-HFG----------INTKASCSDYLNAYYSIIPLSANFYLT 223
L++S HL R++ Q H G + + + +++ ++ + +
Sbjct: 135 LITSDSHLPRAKWMAQIHLGVQGIALQVVTVPEIGIPGNQESPLKTLLDVTRSLIWS 191
>gi|218248566|ref|YP_002373937.1| hypothetical protein PCC8801_3831 [Cyanothece sp. PCC 8801]
gi|218169044|gb|ACK67781.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8801]
Length = 232
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 40/177 (22%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
L K + I++LG T R +L + II
Sbjct: 44 LPINSTKPVDGILVLGGSVT------------------REIYAAQLRHQLPE----IPII 81
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
IS G +E + LE + TF+N FS +++ ++ +
Sbjct: 82 ISQG-------SEDPCIFLIFQRYQAPLQRVWLENCANSTFENFFFSVPLLRRLRVHKVK 134
Query: 178 LVSSAYHLKRSQLYFQ-HFG----------INTKASCSDYLNAYYSIIPLSANFYLT 223
L++S HL R++ Q H G + + + +++ ++ + +
Sbjct: 135 LITSDSHLPRAKWMAQIHLGVQGIALQVVTVPEIGIPGNQESPLKTLLDVTRSLIWS 191
>gi|239980668|ref|ZP_04703192.1| hypothetical protein SalbJ_14585 [Streptomyces albus J1074]
gi|291452528|ref|ZP_06591918.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355477|gb|EFE82379.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 225
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T LY++ + T S + E++ Y L GV + I LE+++ +T
Sbjct: 50 TRTAELYRAGLFSLLVFTGGNSPTTAARFPRGEAVHYREHALGLGVPEEAILLESRAGNT 109
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHF 195
N +S ++ LVS Y +R+ +
Sbjct: 110 GHNITYSRKVLAEAGVSPASVLLVSKPYMERRAYATARKL 149
>gi|111022413|ref|YP_705385.1| hypothetical protein RHA1_ro05447 [Rhodococcus jostii RHA1]
gi|110821943|gb|ABG97227.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 187
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 61/215 (28%), Gaps = 40/215 (18%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ + ++ + I+ + + IV+LG
Sbjct: 3 RRRQRFLLAAALAVMTTATALLWGGRIIYS---------NAPEDPLRPVDAIVVLGG--- 50
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
++ R+ + L + + + DP + +
Sbjct: 51 --------------ENDGRVPYAVSLAEQGLARQVVISNPHDARDPSTNEGCATTDPR-- 94
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH--- 194
+ T AQF+ ++ ++++VS YHL R++ FQ
Sbjct: 95 -------FTVTCVAPHPATTRGEAQFTRTLAVQNGWTSVLVVSWRYHLPRARYIFQRCFD 147
Query: 195 --FGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
++ D+ A + + + AL
Sbjct: 148 GDLTMHAVPRSYDFSLAKWGYVYAYQTAGFVKAAL 182
>gi|254409604|ref|ZP_05023385.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183601|gb|EDX78584.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 198
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 60/199 (30%), Gaps = 51/199 (25%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ +R + ++ + + F G+ I + L++ I
Sbjct: 6 YLFSRSRRSKVRLLSWLMPILAVSLFCGYKQIQSYLIQP------------------EAI 47
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG R + I +S G +
Sbjct: 48 LVLGG------------------EEERELFAADFAQQHP----DLHIWVSSG-------S 78
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
S ++G+ R+ + ++ ++ DT N +K + L+++ H+ R++
Sbjct: 79 PSWYTEKVFAKAGIPRNHLHIDRRATDTVTNFTTLVDELKAQGIDGVYLITADDHMLRAR 138
Query: 190 LY----FQHFGINTKASCS 204
+ F GI K
Sbjct: 139 VIGEIVFGSRGITLKPVPV 157
>gi|218440733|ref|YP_002379062.1| hypothetical protein PCC7424_3813 [Cyanothece sp. PCC 7424]
gi|218173461|gb|ACK72194.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 194
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 58/206 (28%), Gaps = 43/206 (20%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L + RK ++ + K +Q +P I++
Sbjct: 1 MVLKLSRPKRKSPLTKLRQVMILLPLLTVGSWWSYKQIQSYLVKP----------EAILV 50
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG R L Q I +S G + S
Sbjct: 51 LGGHE------------------ERERFAAHLAAKNPQ----LPIWVSSG-------SPS 81
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+GV D + L+ ++ DT N +K ++ L++S H++R+++
Sbjct: 82 NYVKRIFANAGVNSDRLHLDYKAKDTVTNFTTLVDKLKAQGIDSVYLITSENHMRRARII 141
Query: 192 ----FQHFGINTKASCSDYLNAYYSI 213
F GI K S
Sbjct: 142 GEIVFGSRGIIIKPVAVPSDAPSESW 167
>gi|317051966|ref|YP_004113082.1| hypothetical protein Selin_1799 [Desulfurispirillum indicum S5]
gi|316947050|gb|ADU66526.1| protein of unknown function DUF218 [Desulfurispirillum indicum S5]
Length = 305
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 9/129 (6%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++VLLG E S + R Y + G
Sbjct: 6 TLVVLLG-------NENDEAGELSETAILRAQAAAE-YVKAHADCLVLPTGAFGDHFNTS 57
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNIILVSSAYHL 185
+ LL GV D I T+S +T ++A ++ + + +++SA+H+
Sbjct: 58 ATPHGKLLALYLLGQGVSPDRILPSTKSSNTLEDAFGVLRALTSLAGIERVHIITSAFHM 117
Query: 186 KRSQLYFQH 194
R++ F
Sbjct: 118 PRTRFIFGR 126
>gi|333025430|ref|ZP_08453494.1| hypothetical protein STTU_2934 [Streptomyces sp. Tu6071]
gi|332745282|gb|EGJ75723.1| hypothetical protein STTU_2934 [Streptomyces sp. Tu6071]
Length = 198
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 40/121 (33%), Gaps = 2/121 (1%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LY + ++ T S + E++ + ++ V I LE + +T
Sbjct: 23 TRAAELYHAGLFPTLVFTGGNSPTTAKVFPRGEAVHFREHAIDLDVPASAILLEPHAANT 82
Query: 158 FQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
QN + ++ + LVS Y +RS + + C+ + +
Sbjct: 83 GQNITLAREVLADAGITPEKVLLVSKPYMERRSYATARKLWPEAEMVCASETLEFDDYLK 142
Query: 216 L 216
Sbjct: 143 S 143
>gi|75907260|ref|YP_321556.1| hypothetical protein Ava_1037 [Anabaena variabilis ATCC 29413]
gi|75700985|gb|ABA20661.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 188
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 58/193 (30%), Gaps = 47/193 (24%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + ++ + + L+F+ I R ++ Q I +LG
Sbjct: 1 MRRKLKLVKLILAIALIFTSIIT---------------VRIAIAFQQSPVPQAIFVLGG- 44
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
R+ + + Q + I IS
Sbjct: 45 -----------------DAERMRFAAKFW----QSHQNLDIWISDFAWNLDNN------R 77
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF--- 192
L+ GV + L+ ++ DT N + + ++I L++S YH++R+Q
Sbjct: 78 RICLKFGVPEVKLHLDGRATDTVTNFTTLAGDFVEQRLQHIYLITSDYHMRRAQAIATIV 137
Query: 193 -QHFGINTKASCS 204
GI
Sbjct: 138 LGSQGIMVTPVAV 150
>gi|153840631|ref|ZP_01993298.1| SanA protein [Vibrio parahaemolyticus AQ3810]
gi|149745708|gb|EDM56838.1| SanA protein [Vibrio parahaemolyticus AQ3810]
Length = 106
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 23/61 (37%), Gaps = 9/61 (14%)
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+V+ +H +R+ + I+ + AN T + ++E + + A+
Sbjct: 18 IVTQRFHCERALFIADAYNIDAQCLAVAGPT---------ANKQKTSMRIRELLARVKAF 68
Query: 238 Y 238
Sbjct: 69 L 69
>gi|254481013|ref|ZP_05094259.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214038808|gb|EEB79469.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 198
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 42/114 (36%), Gaps = 8/114 (7%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + + SR+ + LY + + A + N L
Sbjct: 39 PEKAEVGVVLGGGGGSRLRAGLSLYDAGFVSQLLL--------VDGKKSAWEHIQKNLCL 90
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ ++ D+++ S +T +A+ + ++++++ YH +R+ L F
Sbjct: 91 DCAIDGKDVRVLEGSTNTLSDAELVEQFCLENRVSSLLIITDPYHTRRASLIFH 144
>gi|257054292|ref|YP_003132124.1| hypothetical protein Svir_02150 [Saccharomonospora viridis DSM
43017]
gi|256584164|gb|ACU95297.1| uncharacterized conserved protein [Saccharomonospora viridis DSM
43017]
Length = 225
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 9/172 (5%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P + I L+ + + T + + E+ Y
Sbjct: 26 LRHAPRRSDVGIGLGSHDLGVAEHAATLFHEGRFELLVFTGATTATTARLFPRGEAAHYR 85
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVSSAYHLKRSQLYFQ 193
+ LE GV D + +E + +T +N +F+ ++ + LV YH +R+ +
Sbjct: 86 ERALELGVPDDAVLVEPHARNTGENIRFTRRLLADSGITVRTATLVCKPYHQRRAYATTR 145
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG----ILIAYYRGN 241
CS + + + +G IL+ RG
Sbjct: 146 KQWPELDVHCSAERITLDEYM---DAIGDADRVVHMLVGETQRILVYARRGF 194
>gi|94984628|ref|YP_603992.1| hypothetical protein Dgeo_0521 [Deinococcus geothermalis DSM 11300]
gi|94554909|gb|ABF44823.1| hypothetical protein Dgeo_0521 [Deinococcus geothermalis DSM 11300]
Length = 270
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 27/49 (55%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHL 49
+L+ +FLI++ ++LL + + + + L FI G++ + L+ L
Sbjct: 55 LLMGLVFLILAVFYLLMRLGLGAWVAALIIALLGFILTGVLVMLGLRRL 103
>gi|82703792|ref|YP_413358.1| hypothetical protein Nmul_A2679 [Nitrosospira multiformis ATCC
25196]
gi|82411857|gb|ABB75966.1| Protein of unknown function DUF748 [Nitrosospira multiformis ATCC
25196]
Length = 1065
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 9 IVSYWHLLCQSIRKIFFMSCF---MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ ++ H + R + +S F ++LF + + +P L+ + L P +
Sbjct: 4 LTTFLHRFIRHRRFLIGLSVFAGIIILFGLLSYFWLPGYAKAKLEEALSEVLHRPVTVQS 63
Query: 66 GNI 68
+I
Sbjct: 64 IDI 66
>gi|300867952|ref|ZP_07112592.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300334089|emb|CBN57770.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 198
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 53/176 (30%), Gaps = 35/176 (19%)
Query: 42 PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
L+ L + + + + +LG + R
Sbjct: 21 SWFLMVLLIVCWFGFNQIKSYWEQPQALFVLGG------------------AAEREVFAA 62
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+ + Q I +S G + E+G++ + + L+ +++DT N
Sbjct: 63 KFAREHPQ----LPIWVSSG-------SNPEYAEWVFAEAGIDPERLHLDYRAVDTVTNF 111
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLY------FQHFGINTKASCSDYLNAYY 211
+K +++ L++S H++R+++ + S
Sbjct: 112 TTLVDELKAQGIQSVYLITSDDHMRRARIIGEIVLGSRGISFKAIPVPSGRAPEPI 167
>gi|111022697|ref|YP_705669.1| hypothetical protein RHA1_ro05733 [Rhodococcus jostii RHA1]
gi|110822227|gb|ABG97511.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 205
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 53/201 (26%), Gaps = 42/201 (20%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L +++ I + + GW + Y RP + P + + IV+LG
Sbjct: 26 ALFKRALWMIIILFTTAAAITAAGWPV------------YVRPQIDP--LRTADAIVVLG 71
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
Y R + L + + + + GD S
Sbjct: 72 G-----------------TPYERFDIGVELAERGYAPQLVISNSVGSGDRTMDKYCHS-- 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ E T AQ +II+V+ H+ R++ +
Sbjct: 113 --------HFDFVVSCFEPDPWTTKGEAQEIGRRAAQQGWHHIIVVTFTPHISRARYIVE 164
Query: 194 H-FGINTKASCSDYLNAYYSI 213
F S +
Sbjct: 165 KCFDGEVTMVASPTPSGLPFW 185
>gi|167010036|ref|ZP_02274967.1| hypothetical protein Ftulh_04749 [Francisella tularensis subsp.
holarctica FSC200]
Length = 88
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +FLI + I+F+ +++ IG G++ TIL L+ +
Sbjct: 15 IGCLFLIALIITCIFSKGYLIYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKA 70
Query: 63 KKDGNIIVLLGNGTTI 78
+ I+LLG G
Sbjct: 71 CANTKGIILLGAGINN 86
>gi|242310092|ref|ZP_04809247.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239523389|gb|EEQ63255.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 386
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMS---CFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L+ IFL + ++ L + IF + +LF + L + + Q
Sbjct: 286 ILAAIFLAIVFFGLYFYKRKIIFLILGICVLAVLFYLLSIK-TAVSLKPNAEIRIQPTFN 344
Query: 59 SPQWKKDGNIIVL 71
S K ++I +
Sbjct: 345 STIILKTKDVIEV 357
>gi|254367890|ref|ZP_04983910.1| hypothetical protein FTHG_01186 [Francisella tularensis subsp.
holarctica 257]
gi|134253700|gb|EBA52794.1| hypothetical protein FTHG_01186 [Francisella tularensis subsp.
holarctica 257]
Length = 91
Score = 36.7 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +FLI + I+F+ +++ IG G++ TIL L+ +
Sbjct: 18 IGCLFLIALIITCIFSKGYLIYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKA 73
Query: 63 KKDGNIIVLLGNGTTI 78
+ I+LLG G
Sbjct: 74 CANTKGIILLGAGINN 89
>gi|284041055|ref|YP_003390985.1| hypothetical protein Slin_6227 [Spirosoma linguale DSM 74]
gi|283820348|gb|ADB42186.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 420
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 62/185 (33%), Gaps = 22/185 (11%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
Q ++ + +P K IV+ GNG + T S + R+ + Y+
Sbjct: 238 QKAFVQVKSTPWTKYTYAAIVVPGNGPELATTP------LSPLNKMRLDMVVSRYRK--- 288
Query: 110 HSMHCTIIISGGDP--QKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSS 166
II+SGG + E+I N L++ + I ++ + T N + ++
Sbjct: 289 -RWAPFIILSGGYCYPFRGPYGEAIEMKNYLMQKHGIPESAILIDPHARHTTTNFRNANR 347
Query: 167 MIKNMQGK----NIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYS--IIPLS 217
++ + + + + + F ++ + + P
Sbjct: 348 LMIRYGFPTDKVCVFISTQSQTNSVASAAFDDRNRRELSYLPYRDKKRISPHDIEFYPTL 407
Query: 218 ANFYL 222
+ ++
Sbjct: 408 ESLHM 412
>gi|160947498|ref|ZP_02094665.1| hypothetical protein PEPMIC_01432 [Parvimonas micra ATCC 33270]
gi|158446632|gb|EDP23627.1| hypothetical protein PEPMIC_01432 [Parvimonas micra ATCC 33270]
Length = 781
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 9/188 (4%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGW-GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
L I +F ++ F +LFSF G G + + Q + + I++L
Sbjct: 26 RLFKNIILGLFLLNSFFILFSFFGNTGFLGNFVRNIFQNLFGSTYFIFLLIMEVIYIIVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
+I F +Y + L + + + P+ G ++
Sbjct: 86 FGKLNKKNKNRSIMTLLLFFNY---MAMVDLANNSSNNFSIKLAVAKNSVPKGSGYIGAV 142
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSS-----SMIKNMQGKNIILVSSAYHLKR 187
+ G+ I L + + ++K+ K +++ Y +
Sbjct: 143 FGYFYNIMIGMIGLYIFTFIIGLFLILSFLDITFVDFLKIMKSYILKAFENINNKYSKYK 202
Query: 188 SQLYFQHF 195
+ F+
Sbjct: 203 EEKIFKEQ 210
>gi|85375113|ref|YP_459175.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
gi|84788196|gb|ABC64378.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
Length = 176
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 58/176 (32%), Gaps = 45/176 (25%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I+ + +++ +G+ L P+++ + + +++
Sbjct: 2 IWRLFLLVVVAYALGFMWFAAAL------------PQPRFEGETDAVIVPTG-------- 41
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+ RI + + K M T + P E
Sbjct: 42 ----------AAGRIDRGLEVLDGGKARMMLVTGVDPEVRP-----------AEFAAEFE 80
Query: 143 VERDDIKLE----TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
V + ++ ++DT NA ++ + + +++ LV++ +H++R+ +
Sbjct: 81 VSMERMRCCVSLGFDAVDTRGNAAETADWVAENRIRSLRLVTTDWHMRRASGELRQ 136
>gi|89074000|ref|ZP_01160506.1| hypothetical protein SKA34_15560 [Photobacterium sp. SKA34]
gi|89050328|gb|EAR55832.1| hypothetical protein SKA34_15560 [Photobacterium sp. SKA34]
Length = 76
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
+L+ + ++ W + + F+ LF+ + + + T LL+ L+ Y +
Sbjct: 18 LLIIGVIGLLVLWFTRKKKLASGIIAFSFLGLFA-VSFQPVSTSLLRPLEQQYPAFV 73
>gi|332708432|ref|ZP_08428409.1| hypothetical protein LYNGBM3L_19350 [Lyngbya majuscula 3L]
gi|332352835|gb|EGJ32398.1| hypothetical protein LYNGBM3L_19350 [Lyngbya majuscula 3L]
Length = 195
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 52/180 (28%), Gaps = 40/180 (22%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
L+ +G I I L+ +Q P I++LG
Sbjct: 13 LWLVLLPMGLFFISIIPLRLAIARHQEPAP--------QAILVLG--------------- 49
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+ R T + S + + + S + + G+ I
Sbjct: 50 ---SNKDRFKFTAQFSHSHPELDIWVSDYYSNFERN----------RQIFRKVGISDQRI 96
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY----FQHFGINTKASCS 204
+ DT N + + ++I LV+S YH+ RS+ F GI
Sbjct: 97 HYDFCPTDTVTNFTCTVNYFYRQDIQHIYLVTSDYHMVRSRAIATFVFGSRGITFTPVSV 156
>gi|299138643|ref|ZP_07031821.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
gi|298599279|gb|EFI55439.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
Length = 203
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 59/220 (26%), Gaps = 27/220 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ R I ++L + ++ L + ++IV+L
Sbjct: 2 KRNRVIRASIAIIILLLVGAFRVVR-----------SGSYLVVNQPERSDVIVVLAGDHD 50
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
R + + L ++ M Q +
Sbjct: 51 DH----------------RYWGALALLRAGYGQKMVMDASSDLTYGQTSAERAAAFVRQS 94
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ + + S + + ++ +LV+S +H +R+ +
Sbjct: 95 AGSNQSQISICTITNDSTVQEAANIRNCLAGLHPAPQSALLVTSDFHTRRALSIVRSRLP 154
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S + ++ P +N + AL E+ ++
Sbjct: 155 QYHWSVAAVNDSTIFGQPWWSNREWAKTALYEWEKLVWWR 194
>gi|113954722|ref|YP_731790.1| hypothetical protein sync_2602 [Synechococcus sp. CC9311]
gi|113882073|gb|ABI47031.1| Uncharacterized conserved protein [Synechococcus sp. CC9311]
Length = 195
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 56/172 (32%), Gaps = 34/172 (19%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+ ++ + + + I++LG R
Sbjct: 8 SLVVFAALVWVSTTGPLKPFREALTTVEPPQRILVLGG------------------DLDR 49
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+RL + + +++SGG + + ++G+++ + L+ ++ D
Sbjct: 50 ERVGLRLAQQ-----LELPLVVSGG-------SNPEYAQWLVRDAGLDQSRVVLDYRAKD 97
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ----LYFQHFGINTKASCS 204
TF N +K K+I LV+S HL R+ L GI
Sbjct: 98 TFTNFTSLVDDLKRDGVKHIYLVTSEDHLPRAMTVGRLVAGSRGIRLTGVPV 149
>gi|218529468|ref|YP_002420284.1| hypothetical protein Mchl_1482 [Methylobacterium chloromethanicum
CM4]
gi|254560390|ref|YP_003067485.1| hypothetical protein METDI1925 [Methylobacterium extorquens DM4]
gi|218521771|gb|ACK82356.1| hypothetical protein Mchl_1482 [Methylobacterium chloromethanicum
CM4]
gi|254267668|emb|CAX23514.1| hypothetical protein; putative membrane protein [Methylobacterium
extorquens DM4]
Length = 280
Score = 36.3 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+W++L ++ LL Q R+ + +L +F + L + P P +
Sbjct: 142 AWLWLTLAVAWLLRQPRRREVLIEILILAAAFRLLPPLTAFALYFVGLHAPPPHERPDPR 201
Query: 64 KD 65
Sbjct: 202 PG 203
>gi|42523257|ref|NP_968637.1| hypothetical protein Bd1767 [Bdellovibrio bacteriovorus HD100]
gi|39575462|emb|CAE79630.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 184
Score = 36.3 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 55/164 (33%), Gaps = 25/164 (15%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
++ + Q + S + V+L G
Sbjct: 6 FWALAFLSAVVLYRFVDEFQKVQSERIQSWTKTPSADCAVVLTGG--------------- 50
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ E L + + + + S ++ + +D+ L
Sbjct: 51 ---AGRVREGFDLLVNQNVKKLVISGVYSNARLREIMPVWPFYG-------NLSENDVVL 100
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ +S T+ NAQ S +++ ++ ++I+LV+S H+ RS F+
Sbjct: 101 DRRSETTYGNAQQSLPIVEALKCRDILLVTSRLHMYRSYRTFRA 144
>gi|227505907|ref|ZP_03935956.1| secreted protein [Corynebacterium striatum ATCC 6940]
gi|227197535|gb|EEI77583.1| secreted protein [Corynebacterium striatum ATCC 6940]
Length = 493
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 1 MLLSWIFLIVSYWHLLC--QSIRKIFFMSCFMLLFSFIGWGIIPTILLKH 48
++ + FL+++ W L + F++ +LLF + W
Sbjct: 259 LVAALFFLLIAQWWLWRLTRRRFNRGFLTASVLLFLALTWASAANFATWS 308
>gi|289641222|ref|ZP_06473389.1| hypothetical protein FsymDgDRAFT_0647 [Frankia symbiont of Datisca
glomerata]
gi|289508984|gb|EFD29916.1| hypothetical protein FsymDgDRAFT_0647 [Frankia symbiont of Datisca
glomerata]
Length = 453
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 7/104 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIP--TILLKHLQFSYQRPL 57
M+LS + + S+ L IRKI ++ + + G + + + ++ L
Sbjct: 166 MVLSLLVALFSFALFLVLYIRKIAIIAVAVFIPLYLAGQPAMSTRDWMKRAMEILAALIL 225
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
P I LG T + + S I
Sbjct: 226 AKPVIY----AIFTLGASIAGDSTGSGMDQTLTILSGIVIMAAA 265
>gi|295678206|ref|YP_003606730.1| transcriptional regulator, AraC family [Burkholderia sp. CCGE1002]
gi|295438049|gb|ADG17219.1| transcriptional regulator, AraC family [Burkholderia sp. CCGE1002]
Length = 311
Score = 35.9 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 52/173 (30%), Gaps = 7/173 (4%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P + +++ G + + + SR ++ C +
Sbjct: 56 ATRPFGDPAYDTVIVTGAMEIAPSSPGLLAFLNDALAASRRTASI-----CTGAFVLAEA 110
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I G A + + + V+ D I + S+ T + + ++
Sbjct: 111 GILDGRHATTHWAHARDLQRRFPRARVDEDRIFIVDGSVWTSAGMTACIDLCLALVENDL 170
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+ S K+ +Y + G ++ S L I + ++ + L E
Sbjct: 171 GVAVSRAIAKKLVVYHRRTGGQSQYSAMLDLEPKSDRIQNALSYAKSH--LHE 221
>gi|291411577|ref|XP_002722069.1| PREDICTED: C-type lectin superfamily 4, member G-like
[Oryctolagus cuniculus]
Length = 311
Score = 35.9 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 22/41 (53%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL 45
+IF++ +W +IFF++ +L+ + + I+ +L
Sbjct: 16 FIFVLPGHWGRWTSWRHRIFFLALAVLVATVLWALILSVLL 56
>gi|291545639|emb|CBL18747.1| Uncharacterized conserved protein [Ruminococcus sp. SR1/5]
Length = 198
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 52/145 (35%), Gaps = 7/145 (4%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ + + ++I + GNG + A + + + + + +
Sbjct: 7 KQIEDFMFIEDKPEKADVIFVPGNGYPQMAEKAA-ELYRNGFAPKILPSGRYSITAGRFT 65
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ G + + L+++GV + I E Q+ T++NA +S +
Sbjct: 66 GVLDKKECYCGTYKTE----WDFLKDVLMQNGVPEEAILKEDQATYTYENAIYSRQVTDR 121
Query: 171 MQ--GKNIILVSSAYHLKRSQLYFQ 193
K IL H +R+ +Y++
Sbjct: 122 EYLDIKKAILCCKTCHARRALMYYK 146
>gi|167375823|ref|XP_001733743.1| pre-mRNA-processing-splicing factor [Entamoeba dispar SAW760]
gi|165905009|gb|EDR30125.1| pre-mRNA-processing-splicing factor, putative [Entamoeba dispar
SAW760]
Length = 2271
Score = 35.9 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL---ESGVERDDIKLETQS 154
E ++L ++ II+S I + N LL E + +I +
Sbjct: 1787 EEVVKLVRALPIEEQPKQIIVSLRGMLDPLETHMIDFPNILLKGSEIALPFGEIMQMEKV 1846
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
D A S ++ NM + VSS R+ L + GIN
Sbjct: 1847 KDAVNKATESMLLMFNMYDDWLETVSSYTAFHRAVLLLRGLGINPI 1892
>gi|56551314|ref|YP_162153.1| hypothetical protein ZMO0418 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241760967|ref|ZP_04759056.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753066|ref|YP_003225959.1| hypothetical protein Za10_0828 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56542888|gb|AAV89042.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374586|gb|EER64047.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552429|gb|ACV75375.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 203
Score = 35.9 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 23/197 (11%), Positives = 50/197 (25%), Gaps = 14/197 (7%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE- 88
+L I + I +L + + P K+ + IV+L G I +
Sbjct: 5 AILLGSIRFLICLFMLWLGGFWLFYSFHAHPTNKQVTDGIVVLTGGAGRIDRGLMMLERH 64
Query: 89 ----PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+R + L S + G + + + +
Sbjct: 65 QAKKMLVSGVNRQVKAEELAALYDIPSHLIECCVDLGTQAVDTSSNAQETAEWITLNHYH 124
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ--------HFG 196
+ + S + K+++ + S A Y + G
Sbjct: 125 SVRLITTDW-HMARARFELSLMIGKDIKVVEDAIPSHAGWRVWIIEYCKYLWRRSSVAIG 183
Query: 197 INTKASCSDYLNAYYSI 213
N+ S + +
Sbjct: 184 FNSIPYPSAPASIWRYF 200
>gi|317133878|ref|YP_004089789.1| hypothetical protein Rumal_3455 [Ruminococcus albus 7]
gi|315450340|gb|ADU23903.1| hypothetical protein Rumal_3455 [Ruminococcus albus 7]
Length = 565
Score = 35.9 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 13/152 (8%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAES 131
+ P EP + R+ LY ++ + I I G +G + S
Sbjct: 379 IEVAAQHPLNHGEPDSEFKERLNFAFELYNKLRKGNRRVGIYIPGSVHTANGIQDQYSLS 438
Query: 132 IVYNNKLLESGVERD---------DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ L + G+ + K E ++ +S + N + K I +V S
Sbjct: 439 LAGVKYLTKLGIPIESLLGDEYNQKYKGENGVYNSADECYVASQIFLNGKYKYIHVVCSP 498
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
+ R QL++ FG+ N+ + +I
Sbjct: 499 NQMLRKQLFYISFGVIPLFHTVPNNNSAHDLI 530
>gi|315639105|ref|ZP_07894272.1| prephenate dehydrogenase [Campylobacter upsaliensis JV21]
gi|315480809|gb|EFU71446.1| prephenate dehydrogenase [Campylobacter upsaliensis JV21]
Length = 275
Score = 35.5 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCS---DYLNAYYSIIPLSANFYLTELALKE 229
V+ H KR+ F H G+ S D+ A S +P + +F L ++E
Sbjct: 143 VADDLHQKRAVEIFSHLGMRIVFMDSTSHDHHTAIISHLPHAISFSLANYVMRE 196
>gi|57505600|ref|ZP_00371527.1| Prephenate dehydrogenase [Campylobacter upsaliensis RM3195]
gi|57016147|gb|EAL52934.1| Prephenate dehydrogenase [Campylobacter upsaliensis RM3195]
Length = 275
Score = 35.5 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCS---DYLNAYYSIIPLSANFYLTELALKE 229
V+ H KR+ F H G+ S D+ A S +P + +F L ++E
Sbjct: 143 VADDLHQKRAVEIFSHLGMRIVFMDSTSHDHHTAIISHLPHAISFSLANYVMRE 196
>gi|167647181|ref|YP_001684844.1| hypothetical protein Caul_3219 [Caulobacter sp. K31]
gi|167349611|gb|ABZ72346.1| protein of unknown function DUF218 [Caulobacter sp. K31]
Length = 207
Score = 35.5 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 67/217 (30%), Gaps = 39/217 (17%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K +++ F+G + + P L P + +V+L + +
Sbjct: 2 KSVAALLIVVMVWFVGLLAFTSRV------DQSTPALEP---PVSDGVVVLTGASNV--- 49
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK-HGLAESIVYNNKLLE 140
R+ +L ++ K + + + + G+ +++
Sbjct: 50 --------------RLEVATKLLEAGKGKRLLISGVNREASREDVLGVTKAVR------- 88
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GIN 198
+ + L + DT NA ++ + +++I+V++ YH+ RS L G+
Sbjct: 89 -PIYECCVDLGYAAADTIGNASETAEWARAKDYRSLIVVTADYHMPRSMLELHASMPGVT 147
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + EY L
Sbjct: 148 LHPYPV--VTESLNAHRWWQGGTSARRMTVEYCKYLA 182
>gi|256545823|ref|ZP_05473179.1| capsular polysaccharide biosynthesis protein Cps4A [Anaerococcus
vaginalis ATCC 51170]
gi|256398519|gb|EEU12140.1| capsular polysaccharide biosynthesis protein Cps4A [Anaerococcus
vaginalis ATCC 51170]
Length = 447
Score = 35.5 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 6/39 (15%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 1 MLLSWIFLIVSYW--HLLCQSIRKIFFMSCFMLLFSFIG 37
++L IFL++ + + + + F+++ F+
Sbjct: 6 IVLGLIFLLIFGFSLLIFKRKKAGKPIKAFFIIVLLFVS 44
>gi|228991813|ref|ZP_04151750.1| hypothetical protein bpmyx0001_25590 [Bacillus pseudomycoides DSM
12442]
gi|228767894|gb|EEM16520.1| hypothetical protein bpmyx0001_25590 [Bacillus pseudomycoides DSM
12442]
Length = 472
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L ++ L+ + + IRK ++F + IP +L+ + +
Sbjct: 379 LLFVMLVYLLIKMKSKKIRKRSVWCISGIIFLVLSIATIP-VLIYSTDSPWHAIYVFSPD 437
Query: 63 KKDGNIIVLLGNGTTI 78
+I V++
Sbjct: 438 LAYLSIGVVILFALNG 453
>gi|187731127|ref|YP_001882274.1| hypothetical protein SbBS512_E3996 [Shigella boydii CDC 3083-94]
gi|187428119|gb|ACD07393.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|320174412|gb|EFW49557.1| hypothetical protein SDB_03085 [Shigella dysenteriae CDC 74-1112]
Length = 442
Score = 35.5 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 4/93 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ IF+++ W L Q IR F+ +L + + L + Q
Sbjct: 2 IGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLW----PAGQPTTTVTTT 57
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ V G ++ +PA P+ + +
Sbjct: 58 GGNAAATVATTGGAPVVGDMPAQTTPPTTANLN 90
>gi|67475030|ref|XP_653245.1| splicing factor Prp8 [Entamoeba histolytica HM-1:IMSS]
gi|56470178|gb|EAL47858.1| splicing factor Prp8, putative [Entamoeba histolytica HM-1:IMSS]
Length = 2270
Score = 35.5 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL---ESGVERDDIKLETQS 154
E ++L ++ II+S I + N LL E + +I +
Sbjct: 1786 EEVVKLVRALPIEEQPKQIIVSLRGMLDPLETHMIDFPNILLKGSEIALPFGEIMQMEKV 1845
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
D A S ++ NM + VSS R+ L + GIN
Sbjct: 1846 KDAVNKATESMLLMFNMYDDWLETVSSYTAFHRAVLLLRGLGINPV 1891
>gi|320537262|ref|ZP_08037222.1| hypothetical protein HMPREF9554_01967 [Treponema phagedenis F0421]
gi|320145890|gb|EFW37546.1| hypothetical protein HMPREF9554_01967 [Treponema phagedenis F0421]
Length = 466
Score = 35.5 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 22/75 (29%), Gaps = 7/75 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP-------TILLKHLQFSY 53
++L +I + Q + F + F I + I+ T L + ++
Sbjct: 351 VILFIAAIIFHLVKMKNQKRVFLVLFVFFSIFFVLISFHILSRASIFKETALCRSIENQN 410
Query: 54 QRPLLSPQWKKDGNI 68
P+
Sbjct: 411 PLIYTVPETSASVIA 425
>gi|258542112|ref|YP_003187545.1| hypothetical protein APA01_10160 [Acetobacter pasteurianus IFO
3283-01]
gi|256633190|dbj|BAH99165.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636247|dbj|BAI02216.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639302|dbj|BAI05264.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642356|dbj|BAI08311.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645411|dbj|BAI11359.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648466|dbj|BAI14407.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651519|dbj|BAI17453.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654510|dbj|BAI20437.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 194
Score = 35.5 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 69/220 (31%), Gaps = 44/220 (20%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L + ++ ++CF G+G L+ P + + IV L
Sbjct: 2 LFIRLSFRLILLACFAF---AGGFGWFVNDALRP-----------PGYLPHADGIVALTG 47
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G RI ++ L + + + + + + +
Sbjct: 48 G------------------AGRIDTSLNLLARNQGEKLLISGVDTQTTLGELLPPTAPPA 89
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ I L Q+ T NA ++ + + ++I+V+++YH++R+ L
Sbjct: 90 LA---------ERITLGYQARSTIGNATETAVWVADNHITSLIVVTASYHMRRALLELSR 140
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ L ++ L L EY+ L
Sbjct: 141 TLPDVTLYPYPVLPPAMEHPLRRSSLRLLAL---EYLKWL 177
>gi|91785802|ref|YP_561008.1| transcriptional regulator [Burkholderia xenovorans LB400]
gi|91689756|gb|ABE32956.1| transcriptional regulator, AraC family with amidase-like domain
[Burkholderia xenovorans LB400]
Length = 311
Score = 35.5 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 53/173 (30%), Gaps = 7/173 (4%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P + +V+ G + + + SR ++ C +
Sbjct: 56 ATRPFSDPAYDTVVVTGAMQIAPSSSGLLAFLNDALAASRRTASI-----CTGAFVLAEA 110
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I G + + ++ V+ D I + S+ T + + ++
Sbjct: 111 GILDGRHATTHWIHARDLQRRFPQARVDEDRIFIVDGSVWTSAGMTACIDLCLALVENDL 170
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+ S ++ +Y + G ++ S L I + ++ + L+E
Sbjct: 171 GVEVSRAIARKLVVYHRRAGGQSQFSAMLELEPKSDRIQNALSYAKSH--LRE 221
>gi|120436280|ref|YP_861966.1| hypothetical protein GFO_1934 [Gramella forsetii KT0803]
gi|117578430|emb|CAL66899.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803]
Length = 583
Score = 35.5 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 43/161 (26%), Gaps = 35/161 (21%)
Query: 2 LLSWIFLIVSYWHLLCQSIR-----KIFFMSCFMLLFSFIGWGIIPTILLKHLQF----- 51
LL IF + W + K F + F+ S +I ++ ++
Sbjct: 13 LLPVIFSAILIWLIFIWKEWYVSKSKRFLLKSFLAFLSIGSLALIALKPVRLVEAEKNKA 72
Query: 52 -------------------------SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
Y+ + + +LG+G +
Sbjct: 73 LILTPGYNEEQLDSLQKETRNLKILRYEPGEPVLEEEDKITSAFILGHGISSFDLWQFDG 132
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I SF R ++L K II + K+G
Sbjct: 133 ISSSFLPGDRPDGVIKLRYKEKNSIGKSFIIQGKYNNPKNG 173
>gi|66819915|ref|XP_643615.1| hypothetical protein DDB_G0275921 [Dictyostelium discoideum AX4]
gi|60471755|gb|EAL69711.1| hypothetical protein DDB_G0275921 [Dictyostelium discoideum AX4]
Length = 303
Score = 35.5 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + ++S ++ + RK+ + +LF +LLK +Q + +
Sbjct: 63 IVTVVVASLISLLYINIYNDRKLLILLTIAVLFILFTGFSFAAMLLKSVQPQLDQKIEQL 122
Query: 61 QWKKDGNIIVL 71
+ I+L
Sbjct: 123 NSEYSAKGIIL 133
>gi|113475490|ref|YP_721551.1| hypothetical protein Tery_1821 [Trichodesmium erythraeum IMS101]
gi|110166538|gb|ABG51078.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 191
Score = 35.5 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 55/177 (31%), Gaps = 33/177 (18%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+I LL L + K +++LG + R
Sbjct: 16 ISLISWFLLGLLATLWISYQQISGTIKPPQALLVLGG------------------AIERE 57
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ + I +S G + ++G+ + + L+ ++DT
Sbjct: 58 AFAAEFARQHP----NLDIWVSSG-------SNPEYAEWLFSQAGISQTRLHLDYDAVDT 106
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKASCSDYLNAY 210
N + +K+ ++ LV+S H++R+ + + GI K +
Sbjct: 107 VTNFTTTVDKLKSQGITSVYLVTSDDHMRRAIVIGKIVLSSRGIAFKPLPVPSGRSP 163
>gi|220929553|ref|YP_002506462.1| hypothetical protein Ccel_2138 [Clostridium cellulolyticum H10]
gi|219999881|gb|ACL76482.1| conserved hypothetical protein [Clostridium cellulolyticum H10]
Length = 533
Score = 35.5 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 11/123 (8%), Positives = 42/123 (34%), Gaps = 3/123 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPT--ILLKHLQFSYQRPLL 58
++ + + ++ + + I+ + F+++F+ + + + + +
Sbjct: 183 LIFALVLNVICLAYFIMNRIKPVKTSLTFLIIFALL-FAPLSNSYAFWRDCVVEDESVYN 241
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
Q +D + + L N + ++ + S Y + K + +++
Sbjct: 242 YLQVTEDKDSVYLSTNVAFGVQSVYRKDNKLSGMYYDYALAAPQFIKDFRSGKKIDLLVL 301
Query: 119 SGG 121
G
Sbjct: 302 GNG 304
>gi|255531612|ref|YP_003091984.1| hypothetical protein Phep_1711 [Pedobacter heparinus DSM 2366]
gi|255344596|gb|ACU03922.1| protein of unknown function DUF218 [Pedobacter heparinus DSM 2366]
Length = 232
Score = 35.1 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 46/169 (27%), Gaps = 9/169 (5%)
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL---AESIVYNNK 137
+ R + Y + I + AES +
Sbjct: 38 VPSDVLFVFGSNVQHREIADIISYMLNAELVNQVVITGGVANYNGSFYKKEAESAQIKSY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-- 195
+ I E +S + +N + + +++ ++ +Y R+ L + F
Sbjct: 98 IPIEKYPDKQIYTENKSKNIIENIVEAQKVYSFKNIRSMTFLAHSYATTRAALSLKRFFP 157
Query: 196 ----GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+DYL S Y L EY+ + RG
Sbjct: 158 SVMLHCIPLPLPTDYLKYPISRQMWWRTAYGRGLVWGEYLRLQTYGQRG 206
>gi|257468917|ref|ZP_05633011.1| TPR repeat-containing protein [Fusobacterium ulcerans ATCC 49185]
gi|317063165|ref|ZP_07927650.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
gi|313688841|gb|EFS25676.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
Length = 181
Score = 35.1 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 20/49 (40%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHL 49
+ + IFL + +++ I + L+ +F GW + L L
Sbjct: 8 VFILIIFLFIGMAFGFNRAVALIPVLFILFLIVAFFGWFAVNFFWLILL 56
>gi|312200487|ref|YP_004020548.1| hypothetical protein FraEuI1c_6708 [Frankia sp. EuI1c]
gi|311231823|gb|ADP84678.1| protein of unknown function DUF218 [Frankia sp. EuI1c]
Length = 219
Score = 35.1 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 63/208 (30%), Gaps = 18/208 (8%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
++++ + + + + + P +IV+LG T +
Sbjct: 5 WWVAFAAVGMVVLAACAVELTHWTASRRHFPDPPAKTGADDQTEVIVVLGCPTRHNGNVS 64
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL-ESG 142
A + ++ ++ ++ +G +AE+ G
Sbjct: 65 ANQQ-----------WRTKIAVRSRRRRTDSLLVFTGAATLGAAVAEADTMAGYARSALG 113
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V + I E S T +N FS+ ++ I + S+ H R++ Y + + A
Sbjct: 114 VAEELIVSEASSRSTRENLAFSTPQLEQATV--IRIASNPLHAARARRYLRQSRPDLFA- 170
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEY 230
L P + A E
Sbjct: 171 ---RLARTRDYRPFEHPWLKLNSAFYEL 195
>gi|94986101|ref|YP_605465.1| hypothetical protein Dgeo_2002 [Deinococcus geothermalis DSM 11300]
gi|94556382|gb|ABF46296.1| protein of unknown function DUF218 [Deinococcus geothermalis DSM
11300]
Length = 198
Score = 35.1 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 73/228 (32%), Gaps = 33/228 (14%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++ + + + + F P +P+ + +++LG
Sbjct: 1 MVRSRQMRTRGSTV--------TLLPLLVLAALLFGFLLLPPSRAPRTEWPHATLIVLGA 52
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS R+ + LY++ T++++GG +E V
Sbjct: 53 A--------QYAGHPSPAFRRRLDHALALYQAG----GVQTVVVTGGRRPGDPYSEGEVG 100
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
N L G+ R + ET+S T +N + + ++ + G + LV+ +
Sbjct: 101 VNYLHRRGIPRSALLAETRSRTTVENLRGARRLL--LPGTPVTLVTDE-----AHAPRAL 153
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
++ + S P L+E + ++ G R
Sbjct: 154 ALARALGLSANASPSPLSAHPDRRYL------LREKLALVAYALLGVR 195
>gi|318040605|ref|ZP_07972561.1| hypothetical protein SCB01_02820 [Synechococcus sp. CB0101]
Length = 176
Score = 35.1 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 51/155 (32%), Gaps = 18/155 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++ G P P I R L +++SGG +
Sbjct: 1 MVFSRGLWQPPLPPPQMILVLGGDVERERVAAELA-----ERDGLPVLVSGG-------S 48
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ G+++ ++L+ ++ DT N ++ + ++++LV+S+ H++R+
Sbjct: 49 NPEYAHWLFGRRGLDQGRVQLDYRATDTLTNFTSIVEDLRRAKVRHVLLVTSSDHMQRAM 108
Query: 190 LY------FQHFGINTKASCSDYLNAYYSIIPLSA 218
L + G+ +
Sbjct: 109 LVGRLVAGSRGIGLTPVEVPCGERCTPEGWRKVWG 143
>gi|71984533|ref|NP_508522.2| TWiK family of potassium channels family member (twk-26)
[Caenorhabditis elegans]
gi|7505938|pir||T16629 hypothetical protein M02F4.5 - Caenorhabditis elegans
gi|51011321|gb|AAK39200.2| Twik family of potassium channels protein 26, confirmed by
transcript evidence [Caenorhabditis elegans]
Length = 519
Score = 35.1 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 16/152 (10%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
W I ++ LL +G+ + + + L+ SP+ +D
Sbjct: 71 FFAWLAYYHHKFGIRHVTLIALL---VGYVFLGGFMFEKLE--------SPRELEDLKET 119
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++L G T I + S R+ + +L K + T++ + G
Sbjct: 120 IVLMQGIIDEETTDIINVTLSTNGTDRVNKLAKLIKRYYK-----TMLEAEGRFHGSVWH 174
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
++ + L+ + S +
Sbjct: 175 KAENLDMHLMWYFSSATFYSMTLFSTIGYGTI 206
>gi|148241344|ref|YP_001226501.1| hypothetical protein SynRCC307_0245 [Synechococcus sp. RCC307]
gi|147849654|emb|CAK27148.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
Length = 186
Score = 35.1 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 34/153 (22%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P L W +I++LG R + L + +
Sbjct: 22 PRLLEPWMPPPQMILVLGG------------------DVEREKQAAALARQ-----SNLP 58
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++I+GG + GV+ ++L+ + DT N ++ ++
Sbjct: 59 VLITGG-------SNPEYAQWVFEGQGVDAQKLQLDYAARDTLSNFTTLVDRLRRRGIRH 111
Query: 176 IILVSSAYHLKRSQLYFQ----HFGINTKASCS 204
++LV+S+ H+ R+ L + GI+
Sbjct: 112 VLLVTSSDHMDRALLVGRVVAGSRGIHLTPVPV 144
>gi|288962085|ref|YP_003452380.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
gi|288914351|dbj|BAI75836.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
Length = 213
Score = 35.1 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 64/180 (35%), Gaps = 37/180 (20%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ IV+L G R+ + L + + + + + G +
Sbjct: 56 TDAIVVLTGGRN------------------RLSTGLELLAAGRAKKLFVSGVY-DGVEVQ 96
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
L S ++ I L + T NA ++ + + ++ LV++ YH+
Sbjct: 97 ELLKLSRHSPTEMECC------ITLGYSADSTIGNAYETADWMHDQGFHSLRLVTANYHM 150
Query: 186 KRSQLYFQHFGINT------KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+RS L + + + +L+ ++ P +AN +T EY +L+ R
Sbjct: 151 RRSLLELSMAMPDVDLLPHPVVAPTVHLDDWWMW-PGTANLLVT-----EYNKLLVVGLR 204
>gi|302543503|ref|ZP_07295845.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302461121|gb|EFL24214.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length = 217
Score = 34.8 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSL 155
+ ++ SGG E++ + L+ GV D I LE ++
Sbjct: 39 AAAFAARQFHAGLFPLLVFSGGSSPTTAGLYPRGEAVHFREHALDLGVPADAILLEPKAG 98
Query: 156 DTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
+T QN FS +++ ++++L++ Y +R+ + + C+
Sbjct: 99 NTGQNIAFSREVLREAGADVESVMLIAMPYMERRAYATCRKAWPEVEVVCASDPLDLADY 158
Query: 214 IPLSAN 219
+ N
Sbjct: 159 VKSIGN 164
>gi|254369443|ref|ZP_04985455.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|254370530|ref|ZP_04986535.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|151568773|gb|EDN34427.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|157122393|gb|EDO66533.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 80
Score = 34.8 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +FLI + +F+ +++ IG G++ TIL L+ +
Sbjct: 7 IGCLFLIALIITCIFSKGYLRYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKA 62
Query: 63 KKDGNIIVLLGNGTTI 78
+ I+LLG G
Sbjct: 63 CANTKGIILLGAGINN 78
>gi|58038750|ref|YP_190714.1| hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
gi|58001164|gb|AAW60058.1| Hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
Length = 239
Score = 34.8 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 22/213 (10%), Positives = 58/213 (27%), Gaps = 44/213 (20%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+++ + G+ Q + + IV L G
Sbjct: 44 KRLLLTCLALGGLWLAGFAWF-----------IQDASKASVTAPVCDGIVALTGGEQ--- 89
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
R+ + L + H + + + + + + +
Sbjct: 90 ---------------RVDTGITLLRGGYGHLLLISGV-------GPHVTLQHILHLQQES 127
Query: 141 SGVE-RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GI 197
+ I L ++ T NA ++ ++ +++V++ YH++R+ L +
Sbjct: 128 LSSPLAERITLGRRATSTIGNAHETAQWARDNHLHRLLVVTAGYHIRRAVLEIHRVAPDL 187
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
L + + +EY
Sbjct: 188 ALVPYPVVPLALQAPLSRRTLFL-----MFREY 215
>gi|13471444|ref|NP_103010.1| potassium uptake protein Kup [Mesorhizobium loti MAFF303099]
gi|52783090|sp|Q98KL8|KUP1_RHILO RecName: Full=Probable potassium transport system protein kup 1
gi|14022186|dbj|BAB48796.1| potassium uptake protein; Kup [Mesorhizobium loti MAFF303099]
Length = 639
Score = 34.8 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 24/211 (11%), Positives = 62/211 (29%), Gaps = 8/211 (3%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++ Y + +++ +LF+FI G + ++K + + L++
Sbjct: 397 VLLYVVMTRIWKWRLWVAISLTVLFAFIDIGFFASNIVKVFEGGWASLLVA--------F 448
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
++LG T + + + L K + S + S L
Sbjct: 449 TIVLGMWTWVRGSRYLFDKTRRNEIPLDFLAGNLLKKKPQLVSGTAVFLTSDPLSAPTAL 508
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
S+ + L E V + + + + M+ ++ R+
Sbjct: 509 MHSLKHYKVLHEQNVILSVVTAPQPVVPDSDRVKMETVNELFMRVTLTFGYMEQPNIPRA 568
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
+ G + + + S+ +
Sbjct: 569 LAICRKQGWKFDIMTTSFFLSRRSLKASPNS 599
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.125 0.301
Lambda K H
0.267 0.0383 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,388,531,653
Number of Sequences: 14124377
Number of extensions: 38727878
Number of successful extensions: 958357
Number of sequences better than 10.0: 4116
Number of HSP's better than 10.0 without gapping: 1999
Number of HSP's successfully gapped in prelim test: 2117
Number of HSP's that attempted gapping in prelim test: 935870
Number of HSP's gapped (non-prelim): 13066
length of query: 242
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 107
effective length of database: 2,936,002,735
effective search space: 314152292645
effective search space used: 314152292645
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 79 (35.1 bits)