HHsearch results for GI: 255764509 and protein with PDBid: 2r4f_A
>2r4f_A 3-hydroxy-3-methylglutaryl-coenzyme A reductase; oxidoreductase, cholesterol, biocynthesis, HMG-COA, NADPH, statin, alternative splicing; HET: RIE; 1.70A {Homo sapiens} PDB: 2q1l_A* 2q6c_A* 2q6b_A* 3bgl_A* 3cct_A* 3ccw_A* 3ccz_A* 3cd0_A* 3cd5_A* 3cd7_A* 3cda_A* 3cdb_A* 1dqa_A* 1dq9_A* 1dq8_A* 1hw8_A* 1hw9_A* 1hwi_A* 1hwj_A* 1hwk_A* ...
Probab=100.00 E-value=0 Score=820.28 Aligned_cols=343 Identities=35% Similarity=0.519 Sum_probs=330.4
Q ss_pred CCCCCEEEEEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCHH
Q ss_conf 97641037861127603756765136774788653034538999989999999559988999967922412599858977
Q gi|255764509|r 1 MHMKKVSSISMPMRWIGPMKITGNVIQDKVKVPLATYEYPLWHSVKRGAHISMLCPDGIRATLIDERMTRSIFFETENAE 80 (351)
Q Consensus 1 m~en~IG~~~lPlGia~~l~InG~~a~~~y~VPMATeE~SvVAAas~gak~~~~~sGG~~t~~~~~~m~r~~~f~~~~~~ 80 (351)
++||+||+++||+||||||+|||+ +|+|||||||||||||+|||||++ +.+|||++++.++.|+|+|+|.|.+..
T Consensus 92 ~~EN~IG~~~lPlGVAgpl~InGk----~y~VPMATeEgSvVASasrGaK~i-~~~GG~~t~v~~d~m~r~pv~~~~~~~ 166 (441)
T 2r4f_A 92 CCENVIGYMPIPVGVAGPLCLDEK----EFQVPMATTEGCLVASTNRGCRAI-GLGGGASSRVLADGMTRGPVVRLPRAC 166 (441)
T ss_dssp TBSSEEEEEEEEEEEEEEEEETTE----EEEEEEECCCTTHHHHHHHHHHHH-HHTTCBEEEEEEEEEEECCEEECSSHH
T ss_pred CCCCEEEEEECCEEEECCEEECCC----EEEEEEEECHHHHHHHHHHHHHHH-HCCCCEEEEECCCCEEEEEEEEECCHH
T ss_conf 755010146213157636798795----899877753778999998899998-707986999857864885599958768
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 8999997617--50999999973015780478888787388699999997320067215889999999999986798148
Q gi|255764509|r 81 MALTALQEIT--LKKAEIARVIEQTSQFTRFLQLHSQIAGNLLFLRLEFATGDASGHNMVTKAADAVMDWILSQWSYLHY 158 (351)
Q Consensus 81 ~a~~~~~~i~--~~~~~i~~~a~~~sr~ggl~~i~~~~~g~~v~l~~~~dt~DAMGaNmvnt~~E~v~~~i~~~~~~~~~ 158 (351)
++.+|..|+. ++++.+++.+++++||||++++++...+++++|+|.|||||||||||||+++|+++++|+++|++.++
T Consensus 167 ~a~~~~~~~~~~e~~~~i~~~~~stsr~g~l~~i~~~~~g~~l~lrf~~dTgDAMGaNmVn~~~E~~~~~l~~~~~~~~~ 246 (441)
T 2r4f_A 167 DSAEVKAWLETSEGFAVIKEAFDSTSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEKALSKLHEYFPEMQI 246 (441)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHTTCSSCEECCCEEEEETTEEEEEEEEECTTBCCHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 89999997638577999987610555400032588764077799999974343111047889999999999986787735
Q ss_pred EEECCCCCHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHH
Q ss_conf 97347743123335543103772079999875699997573899999998878665655422002202162166778888
Q gi|255764509|r 159 GSVSGNICSDKKATAINGIMGRGKNFVAEITINRAICQKYLRTSPEKIILLNTQKNLIGTFLAGGIRSANAHFANMLLAY 238 (351)
Q Consensus 159 ~~ilsN~~tdkk~s~~n~~~~rG~~V~Ae~~i~~~~~~~~l~~~~e~~~~~~~~~~~~a~~~~~~a~t~NkgimNgI~Av 238 (351)
++|+||||+|||+++.|++.+||++|+||+.||.++++++++++++++++.+..++.++++++||++|||||+||||+||
T Consensus 247 l~I~sN~~tdkk~sa~n~i~grGk~vvae~~i~~~vv~~vlk~~~~~l~~~~~~k~~igsa~~~~~~~~N~~iaNgI~AV 326 (441)
T 2r4f_A 247 LAVSGNYCTDKKPAAINWIEGRGKSVVCEAVIPAKVVREVLKTTTEAMIEVNINKNLVGSAMAGSIGGYNAHAANIVTAI 326 (441)
T ss_dssp EESCCSCSCCSSCCHHHHHHCCEEEEEEEEEECHHHHHHTSSSCHHHHHHHHHHHHTHHHHHTTCSSEESSSHHHHHHHH
T ss_pred EEECCCCHHHHHHHHEEEECCCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 87525306655402214651555255321002599999997017899999999888988761202355432133337999
Q ss_pred HHHCCCCHHHHHHHCCCEEEEEEE---CCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCC--CCCCHHHHHH
Q ss_conf 876276378888640320256872---89089999805646773066446888999998608687788--7769889999
Q gi|255764509|r 239 YLATGQDAANIVEGSQGLTYAKLH---DDSLYFSCTIPNLILGCVGNGKNIPAIKNNLTALGCIEERK--TGDNARRLAA 313 (351)
Q Consensus 239 ~lATGnD~a~v~a~~~a~t~~~~~---~~~L~g~i~lPsl~vGtVGG~t~lp~~~~~l~ilg~~~~~~--~~~~A~~La~ 313 (351)
|||||||||++++++|+||.|+.. +++|++++|||||+||||||+|+||+||+||+||||.|.++ +.+||++||+
T Consensus 327 ~lATGqD~a~v~~ss~~~t~~e~~~~~~~dL~~sitlPsL~VGTVGGgT~l~pq~~~L~iLgv~g~~~~~p~~nA~~LA~ 406 (441)
T 2r4f_A 327 YIACGQDAAQNVGSSNCITLMEASGPTNEDLYISCTMPSIEIGTVGGGTNLLPQQACLQMLGVQGACKDNPGENARQLAR 406 (441)
T ss_dssp HHHTTCCGGGHHHHTCEEEEEEEESTTSCEEEEEEEEEEECCCSBSGGGGSHHHHHHHHHTTCCSCCSSSTTHHHHHHHH
T ss_pred HHHHCCCHHHHHHHCCEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 99952768887530563688888865899099999956864798577567666999999739887688898727999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
Q ss_conf 999999888999999880788689999872603367
Q gi|255764509|r 314 ICAATVLCGELSLLAAQTNPGELMEAHLRLERMHLN 349 (351)
Q Consensus 314 iiAavgLAqnlaal~Al~t~G~iq~gHmkl~R~~~~ 349 (351)
||||+|||||||+|+||++.| ||+|||||+|++++
T Consensus 407 IiAa~gLA~nlsal~ALat~g-iqkgHM~l~R~~~~ 441 (441)
T 2r4f_A 407 IVCGTVMAGELSLMAALAAGH-LVKSHMIHNRSKIN 441 (441)
T ss_dssp HHHHHHHHHHHHHHHHHHHC----------------
T ss_pred HHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHCCCCC
T ss_conf 999999999999999987170-89999998545799