HHsearch alignment for GI: 255764510 and conserved domain: pfam02602
>pfam02602 HEM4 Uroporphyrinogen-III synthase HemD. This family consists of uroporphyrinogen-III synthase HemD EC:4.2.1.75 also known as Hydroxymethylbilane hydrolyase (cyclizing) from eukaryotes, bacteria and archaea. This enzyme catalyses the reaction: Hydroxymethylbilane <= uroporphyrinogen-III + H(2)O. Some members of this family are multi-functional proteins possessing other enzyme activities related to porphyrin biosynthesis, with pfam00590, however the aligned region corresponds with the uroporphyrinogen-III synthase EC:4.2.1.75 activity only. Uroporphyrinogen-III synthase is the fourth enzyme in the heme pathway. Mutant forms of the Uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria in humans a recessive inborn error of metabolism also known as Gunther disease.
Probab=100.00 E-value=9.4e-37 Score=239.84 Aligned_cols=209 Identities=21% Similarity=0.228 Sum_probs=175.0
Q ss_pred HHHHHHHHCCCCEEEECCEEEECCCCCC---CCCCCCCCCEEEEECHHHHHHHHHHH---------CCCCCEECCCHHHH
Q ss_conf 9999999879829994210000078520---01644758799984846799988620---------01363000415899
Q gi|255764510|r 14 RTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAITSSESLSTLPANF---------CRHTPIFAIGEASA 81 (232)
Q Consensus 14 ~~~~~L~~~G~~~i~~Pli~i~~~~~~~---~~~~~~~~d~iiftS~~av~~~~~~~---------~~~~~~~~vg~~t~ 81 (232)
T Consensus 2 ~~~~~l~~~G~~vi~~P~l~~~~~~~~~l~~~l~~l~~~d~iiftS~~aV~~~~~~~~~~~~~~~~~~~~~~~avG~~Ta 81 (229)
T pfam02602 2 ELAALLEELGAEPVELPLIEIEPEDRDELDEALEDLGEYDWLIFTSANGVRAFFEALKEAGADLRALANLKIAAVGPKTA 81 (229)
T ss_pred HHHHHHHHCCCEEEEECCEEEECCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHH
T ss_conf 78999997799199977788762881899999861657788999488999999999986065423545664998378999
Q ss_pred HHHHHHCCCCCCCC--CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEEEEEECCCCCCHHH
Q ss_conf 99764101223544--4545678999864220127775389721567562014689846982567688750468999889
Q gi|255764510|r 82 CLARQKGFTQIFHG--KDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159 (232)
Q Consensus 82 ~~~~~~~~~~~~~~--~~~~~~~~~ll~~~~~~~~~~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~vY~~~~~~~~~~~ 159 (232)
T Consensus 82 ~~l~~~G~~~~~~~~~~~~~~~L~~~i~~~----~~~~~il~~~g~~~~~~L~~~L~~~g~~v~~~~~Y~~~~~~~~~~~ 157 (229)
T pfam02602 82 RALREAGLTPDFVPSAEGTAEGLAEELAEL----LAGKRVLLLRGNLGRDDLAEALREAGAKVDEVVVYRTVPPAELPEE 157 (229)
T ss_pred HHHHHCCCCCEEECCCCCCHHHHHHHHHHC----CCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCCHHH
T ss_conf 999984999608798888999999977642----6898699972777736789999977986789988886369877699
Q ss_pred HHHHH--CCCCEEEEECHHHHHHHHHHCCHHH---CCEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHH
Q ss_conf 99862--3783899807899999997135440---5803997188999999976996699879999889999
Q gi|255764510|r 160 MKNLL--QNADAILFYARSSVLYFFSLPLPAK---ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226 (232)
Q Consensus 160 ~~~~~--~~~d~i~f~S~~~v~~~~~~~~~~~---~~~~~~~ig~~tA~~~~~~g~~~~~va~~p~~~~ll~ 226 (232)
T Consensus 158 ~~~~~~~~~~d~i~ftS~~~v~~f~~~~~~~~~~~~~~~v~aiG~~ta~~l~~~G~~~~~va~~p~~~~lv~ 229 (229)
T pfam02602 158 LRELLRAGEIDAVVFTSPSTVRSFLELLPDEGELLKGVKVAAIGPTTAEALRELGLRVDVVAEEPTAEALLE 229 (229)
T ss_pred HHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHCCCCCEEEECCCCHHHCCC
T ss_conf 999998289989998799999999998777555540888999899999999986998169979998443009