HHsearch alignment for GI: 255764510 and conserved domain: pfam02602
>pfam02602 HEM4 Uroporphyrinogen-III synthase HemD. This family consists of uroporphyrinogen-III synthase HemD EC:4.2.1.75 also known as Hydroxymethylbilane hydrolyase (cyclizing) from eukaryotes, bacteria and archaea. This enzyme catalyses the reaction: Hydroxymethylbilane <= uroporphyrinogen-III + H(2)O. Some members of this family are multi-functional proteins possessing other enzyme activities related to porphyrin biosynthesis, with pfam00590, however the aligned region corresponds with the uroporphyrinogen-III synthase EC:4.2.1.75 activity only. Uroporphyrinogen-III synthase is the fourth enzyme in the heme pathway. Mutant forms of the Uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria in humans a recessive inborn error of metabolism also known as Gunther disease.
Probab=99.01 E-value=6.5e-09 Score=72.79 Aligned_cols=99 Identities=14% Similarity=0.039 Sum_probs=79.0
Q ss_pred CHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHH---HCCCCEEEEECHHHHHHHHHHCCHHH------CCEEEEECCHH
Q ss_conf 0146898469825676887504689998899986---23783899807899999997135440------58039971889
Q gi|255764510|r 130 HFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL---LQNADAILFYARSSVLYFFSLPLPAK------ISAAFLCLSNN 200 (232)
Q Consensus 130 ~l~~~L~~~g~~v~~~~vY~~~~~~~~~~~~~~~---~~~~d~i~f~S~~~v~~~~~~~~~~~------~~~~~~~ig~~ 200 (232)
T Consensus 2 ~~~~~l~~~G~~vi~~P~l~~~~~~~~--~l~~~l~~l~~~d~iiftS~~aV~~~~~~~~~~~~~~~~~~~~~~~avG~~ 79 (229)
T pfam02602 2 ELAALLEELGAEPVELPLIEIEPEDRD--ELDEALEDLGEYDWLIFTSANGVRAFFEALKEAGADLRALANLKIAAVGPK 79 (229)
T ss_pred HHHHHHHHCCCEEEEECCEEEECCCCH--HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHH
T ss_conf 789999977991999777887628818--999998616577889994889999999999860654235456649983789
Q ss_pred HHHHHHHCCCCEEEECC-CCCHHHHHHHHHH
Q ss_conf 99999976996699879-9998899999861
Q gi|255764510|r 201 IASAIPASYKNVVTVAC-FPKETSLLKLLPL 230 (232)
Q Consensus 201 tA~~~~~~g~~~~~va~-~p~~~~ll~al~~ 230 (232)
T Consensus 80 Ta~~l~~~G~~~~~~~~~~~~~~~L~~~i~~ 110 (229)
T pfam02602 80 TARALREAGLTPDFVPSAEGTAEGLAEELAE 110 (229)
T ss_pred HHHHHHHCCCCCEEECCCCCCHHHHHHHHHH
T ss_conf 9999998499960879888899999997764