HHsearch alignment of GI: 255764510 and MMDB domain: 1wcw_A_1-47_162-261
>1wcw_A (A:1-47,A:162-261) Uroporphyrinogen III synthase; congenital erythropoietic porphyria, structural genomics, riken structural genomics/proteomics initiative; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=96.03 E-value=0.024 Score=33.02 Aligned_cols=107 Identities=17% Similarity=0.066 Sum_probs=71.5
Q ss_pred CCCCCCCHHHHHHHCCCEEEEEE----------EEEECCCCCCHHHHHHH--HCCCCEEEEECHHHHHHHHHHCCHHH--
Q ss_conf 56756201468984698256768----------87504689998899986--23783899807899999997135440--
Q gi|255764510|r 124 GKPRNFHFEDYLIEHKIPLRVID----------CYYSQDIAYPETTMKNL--LQNADAILFYARSSVLYFFSLPLPAK-- 189 (232)
Q Consensus 124 g~~~~~~l~~~L~~~g~~v~~~~----------vY~~~~~~~~~~~~~~~--~~~~d~i~f~S~~~v~~~~~~~~~~~-- 189 (232)
|-...+.+..--.+.|+...-.+ .|+..|.+.-.--+.++ .+..|++.|..+-.++.+++-.+..+
T Consensus 15 glrrke~fkalaeklgf~pllfpvqatekvpvppyrhlpdpegilrleeallrgevdalafvaaiqveflfegakdpkal 94 (147)
T 1wcw_A 15 GLRRKEAFKALAEKLGFTPLLFPVQATEKVPVPPYRHLPDPEGILRLEEALLRGEVDALAFVAAIQVEFLFEGAKDPKAL 94 (147)
T ss_dssp CSTTHHHHHHHHHHTTCEEEECCCEEEEECCGGSEEEEECHHHHHHHHHHHHHTCCSEEEECSHHHHHHHHHHCSCHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEECHHHEECCCHHEEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 31108999999997799089814165145881586524765789999988633882399965899999999986430145
Q ss_pred -----CCEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf -----58039971889999999769966998799998899999861
Q gi|255764510|r 190 -----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230 (232)
Q Consensus 190 -----~~~~~~~ig~~tA~~~~~~g~~~~~va~~p~~~~ll~al~~ 230 (232)
..++.++.|..||+++++-|.++.+|-+.-...+.+..+.|
T Consensus 95 realntrvkalavgrvtadalrewgvkpfyvdeteRLGSALQgLKR 140 (147)
T 1wcw_A 95 REALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQGFKR 140 (147)
T ss_dssp HHHHHHTSEEEEESHHHHHHHHHTTCCCSEEECSCCHHHHHHHHHH
T ss_pred HHHHHCCCEEEEECHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 8986179789998999999999869983698389998999999999