HHsearch results for GI: 255764510 and protein with PDBid: 3p9z_A
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=100.00 E-value=4.6e-32 Score=210.38 Aligned_cols=200 Identities=17% Similarity=0.172 Sum_probs=157.4
Q ss_pred CEEEECCEEEECCCC----CC----CCCCCCCCCEEEEECHHHHHHHHHHH--------CCCCCEECCCHHHHHHHHHHC
Q ss_conf 299942100000785----20----01644758799984846799988620--------013630004158999976410
Q gi|255764510|r 25 IPVMMPLSYFIHDRE----SV----FLAMQQSYGAIAITSSESLSTLPANF--------CRHTPIFAIGEASACLARQKG 88 (232)
Q Consensus 25 ~~i~~Pli~i~~~~~----~~----~~~~~~~~d~iiftS~~av~~~~~~~--------~~~~~~~~vg~~t~~~~~~~~ 88 (232)
+++..+..+|.|.+. .. ...++.+||||||||+|||++++... .++.+++|+|++|++++++.|
T Consensus 6 ~~~~~~~~~i~~~~~~~l~~i~~~~~~~~l~~yd~iIfTS~naV~~~~~~l~~~~~~~~~~~~~i~aVG~~Ta~~l~~~G 85 (229)
T 3p9z_A 6 EIVWVHSQRIAPYKTLILNEFCYYPLELDPTPFNALIFTSKNAVFSLLETLKNSPKLKMLQNIPAYALSEPTAKTLQDHH 85 (229)
T ss_dssp CEEEESSSCCTTSEEECCEEEEECCCCSCCTTCSEEEESCHHHHHHHHHHTTTCHHHHHHHTSCEEESSHHHHHHHHHTT
T ss_pred EEEEECCCEECCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHC
T ss_conf 17884461635766311300431777638554999999888999999999876444312269859999799999999709
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHH-CCC
Q ss_conf 1223544454567899986422012777538972156756201468984698256768875046899988999862-378
Q gi|255764510|r 89 FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNA 167 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~vY~~~~~~~~~~~~~~~~-~~~ 167 (232)
+.....+..... +.+.+......++++++++||..++++|.+.|.++|++|+++++|++++.+........+. +++
T Consensus 86 ~~~~~~~~~~~~---~~L~~~~~~~~~~~~il~~~g~~~~~~l~~~L~~~g~~v~~~~~Y~~~~~~~~~~~~~~l~~~~~ 162 (229)
T 3p9z_A 86 FKVAFMGEKAHG---KEFVQEIFPLLEKKSVLYLRAKEIVSSLDTILLEHGIDFKQAVVYENKLKHLTLSEQNALKPKEK 162 (229)
T ss_dssp CCBCCCCC------------CCHHHHTTCEEEEEEESSCSSCHHHHHHHTTCEEEEEEEEEEEECCCCHHHHHHHSCCTT
T ss_pred CCCCCCCCCHHH---HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCC
T ss_conf 955315643068---89999765422797699974765507899999866997135778773288779899999855899
Q ss_pred CEEEEECHHHHHHHHHHCCHHHCCEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 38998078999999971354405803997188999999976996699879999889999986
Q gi|255764510|r 168 DAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229 (232)
Q Consensus 168 d~i~f~S~~~v~~~~~~~~~~~~~~~~~~ig~~tA~~~~~~g~~~~~va~~p~~~~ll~al~ 229 (232)
|+|+|||++++++|++.+... .+.+++|||++||+++++.|++ +.+++.|+.++|++++.
T Consensus 163 ~~I~f~S~ssv~~f~~~~~~~-~~~~vi~IG~~ta~~l~~~g~~-~~v~~~ps~~~li~~a~ 222 (229)
T 3p9z_A 163 SILIFTAISHAKAFLHYFEFL-ENYTAISIGNTTALYLQEQGIP-SYIAKKPSLEACLELAL 222 (229)
T ss_dssp CEEEECSHHHHHHHHHHSCCC-TTCEEEESSHHHHHHHHHTTCC-EEECSSSSHHHHHHHHH
T ss_pred CEEEECCHHHHHHHHHHHHCC-CCCEEEEECHHHHHHHHHCCCC-EEECCCCCHHHHHHHHH
T ss_conf 889954999999999973033-7979999999999999976995-69849999899999999