HHSEARCH alignment of GI: 255764510 and SCOP domain: d1jr2a_

Alignment
>d1jr2a_ c.113.1.1 (A:) Uroporphyrinogen III synthase (U3S, HemD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.1e-42  Score=268.70  Aligned_cols=227  Identities=16%  Similarity=0.199  Sum_probs=193.5

Q ss_pred             CE-EEEECCHHHH---HHHHHHHHHCCCCEEEECCEEEECCCCCC---CCCCCCCCCEEEEECHHHHHHHHHHH------
Q ss_conf             93-8985896886---99999999879829994210000078520---01644758799984846799988620------
Q gi|255764510|r    1 MY-IVITRPIKKA---LRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAITSSESLSTLPANF------   67 (232)
Q Consensus         1 M~-ilitRp~~~a---~~~~~~L~~~G~~~i~~Pli~i~~~~~~~---~~~~~~~~d~iiftS~~av~~~~~~~------   67 (232)
                      || ||+|||.+++   +.+.+.|+++|++++.+|+++++|.+.+.   ...++.+|||+||||+|||++++..+      
T Consensus         1 mk~il~trp~~~~~~~d~~~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~l~~~~~~d~iifTS~~aV~~~~~~l~~~~~~   80 (260)
T d1jr2a_           1 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKT   80 (260)
T ss_dssp             CEEEEEESSCCCBTTBCHHHHHHHTTTCEEEEEECEEEEECCHHHHHHHHTCGGGCSEEEECCHHHHHHHHHHHHHTTCH
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCEEEEECCHHHHHHHHHCHHHCCEEEEECCHHHHHHHHHHHHHCCC
T ss_conf             93899569997766401999999968992899898887608838899987283116689991734899999987762764


Q ss_pred             ----------CCCCCEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHH
Q ss_conf             ----------0136300041589999764101223544454567899986422012777538972156756201468984
Q gi|255764510|r   68 ----------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIE  137 (232)
Q Consensus        68 ----------~~~~~~~~vg~~t~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~vl~~~g~~~~~~l~~~L~~  137 (232)
                                .++.+++|+|.+|++++++.|+.....+.+.++.+.+.+..   ....++++++++|...+++|.+.|++
T Consensus        81 ~~~~~~~~~~~~~~~i~aVG~~Ta~~l~~~G~~~~~~~~~~s~~l~~~~~~---~~~~~~~il~~~g~~~~~~L~~~L~~  157 (260)
T d1jr2a_          81 EVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCGNAEKLAEYICS---RESSALPLLFPCGNLKREILPKALKD  157 (260)
T ss_dssp             HHHHHHTHHHHHHSEEEECSHHHHHHHHHTTCCCSCCSCSSHHHHHHHHHT---SCCCSSCEEEEESCGGGCCHHHHHHT
T ss_pred             HHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH---HCCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf             122244443211584999857999999985997520565307888998764---02567549996255530678888885


Q ss_pred             CCCEEEEEEEEEECCCCCCHHHHHHHH---CCCCEEEEECHHHHHHHHHHCCHHH----CCEEEEECCHHHHHHHHHCCC
Q ss_conf             698256768875046899988999862---3783899807899999997135440----580399718899999997699
Q gi|255764510|r  138 HKIPLRVIDCYYSQDIAYPETTMKNLL---QNADAILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYK  210 (232)
Q Consensus       138 ~g~~v~~~~vY~~~~~~~~~~~~~~~~---~~~d~i~f~S~~~v~~~~~~~~~~~----~~~~~~~ig~~tA~~~~~~g~  210 (232)
                      .|+.|+++++|++++...........+   ..+|+|+|||+++++.|++++....    .+..++|||++||+++++.|+
T Consensus       158 ~g~~v~~~~~Y~~~~~~~~~~~~~~~l~~~~~~d~i~f~S~s~v~~~~~~~~~~~~~~~~~~~i~~IG~~ta~~l~~~G~  237 (260)
T d1jr2a_         158 KGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGL  237 (260)
T ss_dssp             TTCCEEEEECEEEEECTTHHHHHHHHHHHHCSCSEEEESSHHHHHHHHHHHHHHHGGGGGGSEEEESSHHHHHHHHHTTC
T ss_pred             CCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCC
T ss_conf             49850699864454464536889999875247617862698999999999987313032583899988999999997699


Q ss_pred             CEEEECCCCCHHHHHHHHHH
Q ss_conf             66998799998899999861
Q gi|255764510|r  211 NVVTVACFPKETSLLKLLPL  230 (232)
Q Consensus       211 ~~~~va~~p~~~~ll~al~~  230 (232)
                      +++++|+.|+.++|+++|.+
T Consensus       238 ~~~~~a~~p~~e~lv~aI~~  257 (260)
T d1jr2a_         238 PVSCTAESPTPQALATGIRK  257 (260)
T ss_dssp             CCSEECSSSSHHHHHHHHHH
T ss_pred             CCEEEECCCCHHHHHHHHHH
T ss_conf             72699698998999999999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: HemD-like
superfamily: HemD-like
family: HemD-like
domain: Uroporphyrinogen III synthase (U3S, HemD)
species: Human (Homo sapiens) [TaxId: 9606]