Query gi|255764510|ref|YP_003065448.2| uroporphyrinogen-III synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 232
No_of_seqs 102 out of 2643
Neff 9.6
Searched_HMMs 13730
Date Sat Jun 4 22:47:49 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 255764510.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jr2a_ c.113.1.1 (A:) Uroporp 100.0 5.1E-42 0 268.7 21.3 227 1-230 1-257 (260)
2 d1wd7a_ c.113.1.1 (A:) Probabl 100.0 6.6E-40 4.8E-44 256.0 17.5 223 1-230 2-247 (254)
3 d1wd7a_ c.113.1.1 (A:) Probabl 98.9 2.5E-09 1.8E-13 72.5 8.5 110 118-229 3-121 (254)
4 d1jr2a_ c.113.1.1 (A:) Uroporp 98.9 1.6E-08 1.2E-12 67.7 10.6 100 128-230 16-131 (260)
5 d1sc6a2 c.23.12.1 (A:7-107,A:2 92.3 0.13 9.8E-06 26.1 5.4 100 1-105 5-109 (132)
6 d1o1ya_ c.23.16.1 (A:) Hypothe 90.3 0.18 1.3E-05 25.3 4.5 51 1-56 4-56 (230)
7 d1ydga_ c.23.5.8 (A:) Trp repr 82.5 0.55 4E-05 22.5 3.4 66 1-66 3-99 (201)
8 d1gdha2 c.23.12.1 (A:2-100,A:2 81.7 1.1 8.2E-05 20.6 4.7 98 2-104 3-106 (129)
9 d1jyea_ c.93.1.1 (A:) Lac-repr 80.4 1.5 0.00011 19.9 9.3 174 14-198 21-213 (271)
10 d7reqa2 c.23.6.1 (A:561-728) M 79.1 1.6 0.00012 19.7 7.8 112 112-229 33-160 (168)
11 d2qwxa1 c.23.5.3 (A:1-230) Qui 76.3 1.6 0.00012 19.7 4.2 31 1-31 3-41 (230)
12 d1vmea1 c.23.5.1 (A:251-398) R 75.0 1.3 9.2E-05 20.3 3.3 48 11-58 20-67 (148)
13 d1m1na_ c.92.2.3 (A:) Nitrogen 66.9 3.2 0.00023 17.9 9.8 192 10-215 230-438 (477)
14 d2a9va1 c.23.16.1 (A:1-196) GM 60.4 3.5 0.00026 17.6 3.2 49 1-57 2-51 (196)
15 d1d4aa_ c.23.5.3 (A:) NAD(P)H: 58.7 4.6 0.00033 17.0 4.8 19 13-31 23-41 (273)
16 d2gk3a1 c.23.16.9 (A:8-253) Pu 57.4 4.8 0.00035 16.8 4.0 45 11-56 31-75 (246)
17 d1id1a_ c.2.1.9 (A:) Rck domai 55.4 5.2 0.00038 16.6 6.9 52 164-215 69-124 (153)
18 d1lssa_ c.2.1.9 (A:) Ktn Mja21 54.1 5.4 0.0004 16.5 4.5 29 1-29 1-29 (132)
19 d1dxya2 c.23.12.1 (A:1-100,A:3 53.3 5.6 0.00041 16.4 8.8 100 1-105 1-108 (131)
20 d1vb5a_ c.124.1.5 (A:) Putativ 52.4 5.8 0.00042 16.3 4.0 103 114-218 107-219 (274)
21 d1q7ra_ c.23.16.1 (A:) Hypothe 51.8 5.9 0.00043 16.3 5.9 47 1-58 7-53 (202)
22 d1ccwa_ c.23.6.1 (A:) Glutamat 49.9 6.3 0.00046 16.1 7.4 95 128-229 20-131 (137)
23 d1ycga1 c.23.5.1 (A:251-399) N 49.6 5.3 0.00039 16.5 2.6 44 12-58 20-63 (149)
24 d1vl0a_ c.2.1.2 (A:) DTDP-4-de 49.0 5.2 0.00038 16.6 2.5 31 1-31 2-33 (281)
25 d1udca_ c.2.1.2 (A:) Uridine d 47.8 6.8 0.0005 15.9 4.2 29 1-29 1-30 (338)
26 d1e5da1 c.23.5.1 (A:251-402) R 47.1 6.1 0.00045 16.2 2.6 44 12-58 20-63 (152)
27 d1qp8a1 c.2.1.4 (A:83-263) Put 45.8 7.3 0.00053 15.7 3.0 64 114-177 40-103 (181)
28 d2h1qa1 c.67.3.1 (A:1-251) Hyp 43.8 7.9 0.00058 15.5 4.3 110 113-229 119-233 (251)
29 d2a5la1 c.23.5.8 (A:3-198) Trp 42.9 8.2 0.00059 15.4 3.5 48 11-58 18-77 (196)
30 d5nula_ c.23.5.1 (A:) Flavodox 37.1 10 0.00073 14.9 3.0 50 1-57 1-54 (138)
31 d1sqsa_ c.23.5.5 (A:) Hypothet 36.4 10 0.00075 14.8 4.0 13 46-58 77-89 (232)
32 d1guda_ c.93.1.1 (A:) D-allose 34.5 11 0.00081 14.6 11.1 207 14-224 22-254 (288)
33 d1uc8a1 c.30.1.6 (A:1-88) Lysi 33.0 12 0.00086 14.5 4.8 52 3-55 4-55 (88)
34 d1rlia_ c.23.5.6 (A:) Hypothet 33.0 12 0.00086 14.5 4.4 13 45-57 64-76 (179)
35 d1rtta_ c.23.5.4 (A:) Hypothet 32.5 12 0.00087 14.4 2.4 28 1-28 1-35 (174)
36 d2fz5a1 c.23.5.1 (A:1-137) Fla 31.9 12 0.00089 14.4 3.3 41 10-57 15-55 (137)
37 d1kewa_ c.2.1.2 (A:) dTDP-gluc 29.3 14 0.00099 14.1 3.9 29 1-29 1-30 (361)
38 d1v7ra_ c.51.4.1 (A:) XTP pyro 28.6 14 0.001 14.0 4.3 30 1-30 1-31 (186)
39 d1usga_ c.93.1.1 (A:) Leucine- 28.4 14 0.001 14.0 9.0 94 101-195 123-223 (346)
40 d1wdia_ e.53.1.1 (A:) Queuosin 27.9 14 0.001 14.0 7.2 89 114-209 174-267 (344)
41 d2dria_ c.93.1.1 (A:) D-ribose 27.9 14 0.001 14.0 10.1 200 14-222 22-240 (271)
42 d1p90a_ c.55.5.2 (A:) NafY cor 27.7 14 0.0011 13.9 3.5 35 195-229 74-108 (123)
43 d1jaya_ c.2.1.6 (A:) Coenzyme 26.9 15 0.0011 13.9 4.2 29 1-29 1-30 (212)
44 d1wu2a3 c.57.1.2 (A:181-324) M 25.6 13 0.00094 14.3 1.4 48 13-60 34-82 (144)
45 d1ulua_ c.2.1.2 (A:) Enoyl-ACP 23.9 17 0.0012 13.5 5.9 28 2-29 10-40 (256)
46 d1r6da_ c.2.1.2 (A:) dTDP-gluc 23.5 17 0.0013 13.5 2.6 27 1-27 1-28 (322)
47 d1i24a_ c.2.1.2 (A:) Sulfolipi 23.4 17 0.0013 13.5 4.2 29 1-29 2-31 (393)
48 d2c5aa1 c.2.1.2 (A:13-375) GDP 23.1 18 0.0013 13.4 4.8 29 1-29 16-45 (363)
49 d1ks9a2 c.2.1.6 (A:1-167) Keto 22.9 18 0.0013 13.4 4.5 30 1-30 1-30 (167)
50 d1mioa_ c.92.2.3 (A:) Nitrogen 22.9 18 0.0013 13.4 9.0 132 10-147 219-366 (525)
51 d1t9ka_ c.124.1.5 (A:) Probabl 22.7 18 0.0013 13.4 2.3 101 114-217 143-265 (340)
52 d1qp8a2 c.23.12.1 (A:1-82,A:26 22.4 18 0.0013 13.3 1.7 20 1-22 1-20 (121)
53 d1iuka_ c.2.1.8 (A:) Hypotheti 20.9 20 0.0014 13.2 2.8 97 117-213 14-121 (136)
No 1
>d1jr2a_ c.113.1.1 (A:) Uroporphyrinogen III synthase (U3S, HemD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=5.1e-42 Score=268.70 Aligned_cols=227 Identities=16% Similarity=0.199 Sum_probs=193.5
Q ss_pred CE-EEEECCHHHH---HHHHHHHHHCCCCEEEECCEEEECCCCCC---CCCCCCCCCEEEEECHHHHHHHHHHH------
Q ss_conf 93-8985896886---99999999879829994210000078520---01644758799984846799988620------
Q gi|255764510|r 1 MY-IVITRPIKKA---LRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAITSSESLSTLPANF------ 67 (232)
Q Consensus 1 M~-ilitRp~~~a---~~~~~~L~~~G~~~i~~Pli~i~~~~~~~---~~~~~~~~d~iiftS~~av~~~~~~~------ 67 (232)
|| ||+|||.+++ +.+.+.|+++|++++.+|+++++|.+.+. ...++.+|||+||||+|||++++..+
T Consensus 1 mk~il~trp~~~~~~~d~~~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~l~~~~~~d~iifTS~~aV~~~~~~l~~~~~~ 80 (260)
T d1jr2a_ 1 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKT 80 (260)
T ss_dssp CEEEEEESSCCCBTTBCHHHHHHHTTTCEEEEEECEEEEECCHHHHHHHHTCGGGCSEEEECCHHHHHHHHHHHHHTTCH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCEEEEECCHHHHHHHHHCHHHCCEEEEECCHHHHHHHHHHHHHCCC
T ss_conf 93899569997766401999999968992899898887608838899987283116689991734899999987762764
Q ss_pred ----------CCCCCEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHH
Q ss_conf ----------0136300041589999764101223544454567899986422012777538972156756201468984
Q gi|255764510|r 68 ----------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIE 137 (232)
Q Consensus 68 ----------~~~~~~~~vg~~t~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~vl~~~g~~~~~~l~~~L~~ 137 (232)
.++.+++|+|.+|++++++.|+.....+.+.++.+.+.+.. ....++++++++|...+++|.+.|++
T Consensus 81 ~~~~~~~~~~~~~~~i~aVG~~Ta~~l~~~G~~~~~~~~~~s~~l~~~~~~---~~~~~~~il~~~g~~~~~~L~~~L~~ 157 (260)
T d1jr2a_ 81 EVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCGNAEKLAEYICS---RESSALPLLFPCGNLKREILPKALKD 157 (260)
T ss_dssp HHHHHHTHHHHHHSEEEECSHHHHHHHHHTTCCCSCCSCSSHHHHHHHHHT---SCCCSSCEEEEESCGGGCCHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH---HCCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 122244443211584999857999999985997520565307888998764---02567549996255530678888885
Q ss_pred CCCEEEEEEEEEECCCCCCHHHHHHHH---CCCCEEEEECHHHHHHHHHHCCHHH----CCEEEEECCHHHHHHHHHCCC
Q ss_conf 698256768875046899988999862---3783899807899999997135440----580399718899999997699
Q gi|255764510|r 138 HKIPLRVIDCYYSQDIAYPETTMKNLL---QNADAILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYK 210 (232)
Q Consensus 138 ~g~~v~~~~vY~~~~~~~~~~~~~~~~---~~~d~i~f~S~~~v~~~~~~~~~~~----~~~~~~~ig~~tA~~~~~~g~ 210 (232)
.|+.|+++++|++++...........+ ..+|+|+|||+++++.|++++.... .+..++|||++||+++++.|+
T Consensus 158 ~g~~v~~~~~Y~~~~~~~~~~~~~~~l~~~~~~d~i~f~S~s~v~~~~~~~~~~~~~~~~~~~i~~IG~~ta~~l~~~G~ 237 (260)
T d1jr2a_ 158 KGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGL 237 (260)
T ss_dssp TTCCEEEEECEEEEECTTHHHHHHHHHHHHCSCSEEEESSHHHHHHHHHHHHHHHGGGGGGSEEEESSHHHHHHHHHTTC
T ss_pred CCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCC
T ss_conf 49850699864454464536889999875247617862698999999999987313032583899988999999997699
Q ss_pred CEEEECCCCCHHHHHHHHHH
Q ss_conf 66998799998899999861
Q gi|255764510|r 211 NVVTVACFPKETSLLKLLPL 230 (232)
Q Consensus 211 ~~~~va~~p~~~~ll~al~~ 230 (232)
+++++|+.|+.++|+++|.+
T Consensus 238 ~~~~~a~~p~~e~lv~aI~~ 257 (260)
T d1jr2a_ 238 PVSCTAESPTPQALATGIRK 257 (260)
T ss_dssp CCSEECSSSSHHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHH
T ss_conf 72699698998999999999
No 2
>d1wd7a_ c.113.1.1 (A:) Probable uroporphyrinogen-III synthase {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=6.6e-40 Score=256.04 Aligned_cols=223 Identities=15% Similarity=0.077 Sum_probs=185.4
Q ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCC----CCCCCCCEEEEECHHHHHHHHHHHC--------
Q ss_conf 9389858968869999999987982999421000007852001----6447587999848467999886200--------
Q gi|255764510|r 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSESLSTLPANFC-------- 68 (232)
Q Consensus 1 M~ilitRp~~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~----~~~~~~d~iiftS~~av~~~~~~~~-------- 68 (232)
|||.|+.++ ++++++..|+++|++++++|++++++.+.+... ...++|||+||||+|||++|+..+.
T Consensus 2 ~r~~~~~~r-~~e~~~~lle~~G~~p~~~P~i~i~~~p~~~~~~~~~~~~~~~d~vvfTS~ngV~~~~~~l~~~~~~~~~ 80 (254)
T d1wd7a_ 2 VRVAYAGLR-RKEAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTGVGVRDLLEAGKALGLDLEG 80 (254)
T ss_dssp CEEEECCST-THHHHHHHHHHTTCEEEECCCBCSSCEECTTHHHHHHHHHTCCSEEEECCHHHHHHHHHHHHHTTCCCHH
T ss_pred CEEEECHHH-HHHHHHHHHHHCCCCEEEECCEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCHHH
T ss_conf 526523044-4899999999779928983321036088045689998622599999998989999999999874952767
Q ss_pred --CCCCEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEE
Q ss_conf --136300041589999764101223544454567899986422012777538972156756201468984698256768
Q gi|255764510|r 69 --RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVID 146 (232)
Q Consensus 69 --~~~~~~~vg~~t~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~ 146 (232)
.+.+++|+|++|++++.+.|+.....+.+.++.+.+.+ ....+.+++++++.++++|.+.|++.|+.|+++.
T Consensus 81 ~l~~~~i~aVG~~Ta~aL~~~G~~~~~~~~~~s~~l~~~~------~~~~~~~l~~~~~~~~~~L~~~L~~~G~~v~~v~ 154 (254)
T d1wd7a_ 81 PLAKAFRLARGAKAARALKEAGLPPHAVGDGTSKSLLPLL------PQGRGVAALQLYGKPLPLLENALAERGYRVLPLM 154 (254)
T ss_dssp HHHTSEEEESSHHHHHHHHHTTCCCSEECSSSGGGGGGGC------CCCCEEEEEECSSSCCHHHHHHHHHTTEEEEEEC
T ss_pred HHCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHH------HCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEE
T ss_conf 8418859999789999999739998537720079999987------3479789995156783799999973667646999
Q ss_pred EEEECCCCCCHHHHHHHH--CCCCEEEEECHHHHHHHHHHCCHHH-------CCEEEEECCHHHHHHHHHCCCCEEEECC
Q ss_conf 875046899988999862--3783899807899999997135440-------5803997188999999976996699879
Q gi|255764510|r 147 CYYSQDIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPAK-------ISAAFLCLSNNIASAIPASYKNVVTVAC 217 (232)
Q Consensus 147 vY~~~~~~~~~~~~~~~~--~~~d~i~f~S~~~v~~~~~~~~~~~-------~~~~~~~ig~~tA~~~~~~g~~~~~va~ 217 (232)
+|++++.+.....+...+ +++|+|+|||++++++|++++...+ .++.++||||.|++++++.|++++++++
T Consensus 155 ~Y~t~~~~~~~~~l~~~l~~~~~d~V~ftS~s~v~~f~~~~~~~~~~~~~~~~~~~v~aIGp~Ta~al~~~G~~~~v~~~ 234 (254)
T d1wd7a_ 155 PYRHLPDPEGILRLEEALLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDE 234 (254)
T ss_dssp SEECCBCHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHHCSCHHHHHHHHHTTSEEEEESHHHHHHHHHTTCCCSEEET
T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCEEEEC
T ss_conf 86640333673889999842895299847889999999987553033777426978999899999999976998279809
Q ss_pred CCCHHHHHHHHHH
Q ss_conf 9998899999861
Q gi|255764510|r 218 FPKETSLLKLLPL 230 (232)
Q Consensus 218 ~p~~~~ll~al~~ 230 (232)
.|+.++|+++|++
T Consensus 235 ~~t~~~lv~al~~ 247 (254)
T d1wd7a_ 235 TERLGSLLQGFKR 247 (254)
T ss_dssp TCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
T ss_conf 9998999999999
No 3
>d1wd7a_ c.113.1.1 (A:) Probable uroporphyrinogen-III synthase {Thermus thermophilus [TaxId: 274]}
Probab=98.92 E-value=2.5e-09 Score=72.54 Aligned_cols=110 Identities=18% Similarity=0.152 Sum_probs=83.1
Q ss_pred EEEEECCCCCCCCHHHHHHHCCCEEEEEEEEEECCCCCC--HHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHC-----
Q ss_conf 389721567562014689846982567688750468999--8899986237838998078999999971354405-----
Q gi|255764510|r 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI----- 190 (232)
Q Consensus 118 ~vl~~~g~~~~~~l~~~L~~~g~~v~~~~vY~~~~~~~~--~~~~~~~~~~~d~i~f~S~~~v~~~~~~~~~~~~----- 190 (232)
+|. +.+.-..+.+.+-|++.|+.+..+++=+.++.+.. .+......++.|+++|||+.+|+.|++.+...+.
T Consensus 3 r~~-~~~~r~~e~~~~lle~~G~~p~~~P~i~i~~~p~~~~~~~~~~~~~~~d~vvfTS~ngV~~~~~~l~~~~~~~~~~ 81 (254)
T d1wd7a_ 3 RVA-YAGLRRKEAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTGVGVRDLLEAGKALGLDLEGP 81 (254)
T ss_dssp EEE-ECCSTTHHHHHHHHHHTTCEEEECCCBCSSCEECTTHHHHHHHHHTCCSEEEECCHHHHHHHHHHHHHTTCCCHHH
T ss_pred EEE-ECHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHH
T ss_conf 265-2304448999999997799289833210360880456899986225999999989899999999998749527678
Q ss_pred --CEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf --803997188999999976996699879999889999986
Q gi|255764510|r 191 --SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229 (232)
Q Consensus 191 --~~~~~~ig~~tA~~~~~~g~~~~~va~~p~~~~ll~al~ 229 (232)
+.+++|+|+.|++++++.|++++.+++ .+.+++++.+.
T Consensus 82 l~~~~i~aVG~~Ta~aL~~~G~~~~~~~~-~~s~~l~~~~~ 121 (254)
T d1wd7a_ 82 LAKAFRLARGAKAARALKEAGLPPHAVGD-GTSKSLLPLLP 121 (254)
T ss_dssp HHTSEEEESSHHHHHHHHHTTCCCSEECS-SSGGGGGGGCC
T ss_pred HCCCEEEEECHHHHHHHHHCCCCCCCCCC-HHHHHHHHHHH
T ss_conf 41885999978999999973999853772-00799999873
No 4
>d1jr2a_ c.113.1.1 (A:) Uroporphyrinogen III synthase (U3S, HemD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=1.6e-08 Score=67.72 Aligned_cols=100 Identities=9% Similarity=-0.028 Sum_probs=79.0
Q ss_pred CCCHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHH---CCCCEEEEECHHHHHHHHHHCCHHH-------------CC
Q ss_conf 6201468984698256768875046899988999862---3783899807899999997135440-------------58
Q gi|255764510|r 128 NFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNADAILFYARSSVLYFFSLPLPAK-------------IS 191 (232)
Q Consensus 128 ~~~l~~~L~~~g~~v~~~~vY~~~~~~~~~~~~~~~~---~~~d~i~f~S~~~v~~~~~~~~~~~-------------~~ 191 (232)
.+.+.+.|.++|+.+..+++=+.++.. .+.+...+ .+.|+++|||+.+|+.|.+.+...+ .+
T Consensus 16 ~d~~~~~L~~~G~~~~~~P~i~i~~~~--~~~~~~~l~~~~~~d~iifTS~~aV~~~~~~l~~~~~~~~~~~~~~~~~~~ 93 (260)
T d1jr2a_ 16 QDPYIRELGLYGLEATLIPVLSFEFLS--LPSFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKTEVWERSLKEKWNA 93 (260)
T ss_dssp BCHHHHHHHTTTCEEEEEECEEEEECC--HHHHHHHHTCGGGCSEEEECCHHHHHHHHHHHHHTTCHHHHHHHTHHHHHH
T ss_pred CCHHHHHHHHCCCCEEEECCEEEEECC--HHHHHHHHHCHHHCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
T ss_conf 019999999689928998988876088--388999872831166899917348999999877627641222444432115
Q ss_pred EEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 039971889999999769966998799998899999861
Q gi|255764510|r 192 AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230 (232)
Q Consensus 192 ~~~~~ig~~tA~~~~~~g~~~~~va~~p~~~~ll~al~~ 230 (232)
.+++|+|+.|++++++.|++++ +.+.++.+++++.+..
T Consensus 94 ~~i~aVG~~Ta~~l~~~G~~~~-~~~~~~s~~l~~~~~~ 131 (260)
T d1jr2a_ 94 KSVYVVGNATASLVSKIGLDTE-GETCGNAEKLAEYICS 131 (260)
T ss_dssp SEEEECSHHHHHHHHHTTCCCS-CCSCSSHHHHHHHHHT
T ss_pred CEEEEECHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHH
T ss_conf 8499985799999998599752-0565307888998764
No 5
>d1sc6a2 c.23.12.1 (A:7-107,A:296-326) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=92.30 E-value=0.13 Score=26.15 Aligned_cols=100 Identities=13% Similarity=0.151 Sum_probs=53.4
Q ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECHHHH-HHHHHHHCCCCCE--ECCC
Q ss_conf 938985896886999999998798299942100000785200164475879998484679-9988620013630--0041
Q gi|255764510|r 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL-STLPANFCRHTPI--FAIG 77 (232)
Q Consensus 1 M~ilitRp~~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~~av-~~~~~~~~~~~~~--~~vg 77 (232)
||||||.+.++ .-.+.|++.|+..+..+- .+++.+.....+.++|++++.|..-+ ..+.....+-.-+ +.+|
T Consensus 5 mKILv~d~i~~--~a~~~L~~~g~~~v~~~~---~~~~~~~l~~~~~~~d~ii~~~~~~i~~~~i~~~p~Lk~I~~~gvG 79 (132)
T d1sc6a2 5 IKFLLVEGVHQ--KALESLRAAGYTNIEFHK---GALDDEQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGAFAIG 79 (132)
T ss_dssp CCEEECSCCCH--HHHHHHHHTTCCCEEECS---SCCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHCSSCCEEEECSSC
T ss_pred CEEEEECCCCH--HHHHHHHHCCCEEEEECC---CCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCEEEEEECCC
T ss_conf 88999789899--999999848999999579---9999999998656783999944643675552034442267774155
Q ss_pred HH--HHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 58--99997641012235444545678999
Q gi|255764510|r 78 EA--SACLARQKGFTQIFHGKDNSINLAKI 105 (232)
Q Consensus 78 ~~--t~~~~~~~~~~~~~~~~~~~~~~~~l 105 (232)
-. =..++.+.|......+.......++.
T Consensus 80 ~D~IDl~aa~~~gI~V~ntp~~~~~svAe~ 109 (132)
T d1sc6a2 80 TNQVDLDAAAKRGIPVFNAPFSSTQEAQEN 109 (132)
T ss_dssp CTTBCHHHHHHTTCCEECCTTTCSHHHHHH
T ss_pred CCCCCHHHHHHCCCEEEECCCCCHHHHHHH
T ss_conf 455689999859988998999860699999
No 6
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]}
Probab=90.32 E-value=0.18 Score=25.31 Aligned_cols=51 Identities=6% Similarity=0.027 Sum_probs=35.5
Q ss_pred CEEEEEC--CHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEEC
Q ss_conf 9389858--9688699999999879829994210000078520016447587999848
Q gi|255764510|r 1 MYIVITR--PIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITS 56 (232)
Q Consensus 1 M~ilitR--p~~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS 56 (232)
|||||.+ +.++...+.+.|++.|+++...-+.... ....++.+||.+|++-
T Consensus 4 mrvli~qh~~~e~~G~~~~~l~~~g~~~~~~~~~~~~-----~~p~~l~~~d~iii~G 56 (230)
T d1o1ya_ 4 VRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKGE-----KLERPLEEYSLVVLLG 56 (230)
T ss_dssp CEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGTC-----CCSSCGGGCSEEEECC
T ss_pred EEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCC-----CCCCCHHHCCEEEECC
T ss_conf 0899997999989379999999789979999789987-----6876643378899829
No 7
>d1ydga_ c.23.5.8 (A:) Trp repressor binding protein WrbA {Deinococcus radiodurans [TaxId: 1299]}
Probab=82.49 E-value=0.55 Score=22.48 Aligned_cols=66 Identities=12% Similarity=0.034 Sum_probs=38.4
Q ss_pred CEEEEECC--HHH----HHHHHHHHHHCCCCEEEECCEEEECC----------------CC--CCCCCCCCCCCEEEEEC
Q ss_conf 93898589--688----69999999987982999421000007----------------85--20016447587999848
Q gi|255764510|r 1 MYIVITRP--IKK----ALRTQEKIQKMGYIPVMMPLSYFIHD----------------RE--SVFLAMQQSYGAIAITS 56 (232)
Q Consensus 1 M~ilitRp--~~~----a~~~~~~L~~~G~~~i~~Pli~i~~~----------------~~--~~~~~~~~~~d~iiftS 56 (232)
|||||.-- ... +...++-+++.|+++..+.+-+..+. .+ .....++.++|.|||-|
T Consensus 3 mkilivy~S~~GnT~~la~~ia~g~~~~G~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~aD~ii~gs 82 (201)
T d1ydga_ 3 VKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEATPADLEWAEAIVFSS 82 (201)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSCBCCHHHHHHCSEEEEEE
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEC
T ss_conf 57999996898389999999999998659779999855667642020136766088765672455455575388769825
Q ss_pred HHH-------HHHHHHH
Q ss_conf 467-------9998862
Q gi|255764510|r 57 SES-------LSTLPAN 66 (232)
Q Consensus 57 ~~a-------v~~~~~~ 66 (232)
|.= ++.|...
T Consensus 83 Pvy~~~~s~~~k~flDr 99 (201)
T d1ydga_ 83 PTRFGGATSQMRAFIDT 99 (201)
T ss_dssp EEETTEECHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHH
T ss_conf 51310026066779887
No 8
>d1gdha2 c.23.12.1 (A:2-100,A:292-321) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}
Probab=81.68 E-value=1.1 Score=20.62 Aligned_cols=98 Identities=14% Similarity=0.118 Sum_probs=48.8
Q ss_pred EEEEECCHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECHHHH-HHHHHHHCCCCCE---ECCC
Q ss_conf 38985896886999999998798299942100000785200164475879998484679-9988620013630---0041
Q gi|255764510|r 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL-STLPANFCRHTPI---FAIG 77 (232)
Q Consensus 2 ~ilitRp~~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~~av-~~~~~~~~~~~~~---~~vg 77 (232)
|||||+|.++. ..+.|++. ++++..+..+ +.+.+.......++|+++.++..-+ +-+........++ +.+|
T Consensus 3 kVlit~~~~~~--~~~~l~~~-~~v~~~~~~~--~~s~~el~~~~~~~d~ii~~~~~~i~~~~l~~~~~~LK~I~~~gvG 77 (129)
T d1gdha2 3 KILITWPLPEA--AMARARES-YDVIAHGDDP--KITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYSIG 77 (129)
T ss_dssp EEEESSCCCHH--HHHHHHTT-SEEEECCSTT--CCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEEEESSC
T ss_pred EEEEECCCCHH--HHHHHHCC-CCEEEECCCC--CCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCEEEEECCCC
T ss_conf 89991989999--99999758-9199808999--9999999998569989998387314467775650010055551569
Q ss_pred HH--HHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 58--9999764101223544454567899
Q gi|255764510|r 78 EA--SACLARQKGFTQIFHGKDNSINLAK 104 (232)
Q Consensus 78 ~~--t~~~~~~~~~~~~~~~~~~~~~~~~ 104 (232)
-. =-+++.+.|......+...+...+|
T Consensus 78 ~d~ID~~~a~~~gI~V~ntpg~~~~aVAE 106 (129)
T d1gdha2 78 FDHIDLDACKARGIKVGNAPHGATQARED 106 (129)
T ss_dssp CTTBCHHHHHHTTCEEECCCCSBHHHHHH
T ss_pred CCCCCHHHHHHCCCEEEECCCCCCHHHHH
T ss_conf 86436999986999899799977567999
No 9
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=80.40 E-value=1.5 Score=19.91 Aligned_cols=174 Identities=13% Similarity=0.084 Sum_probs=88.7
Q ss_pred HHHHHHHHCCCCEEEECCEEEEC--CCCCCCCCCCCCCCEEEEECHH--HHHHHHHHHCCCCCEECCCHHHHHHHHHHCC
Q ss_conf 99999998798299942100000--7852001644758799984846--7999886200136300041589999764101
Q gi|255764510|r 14 RTQEKIQKMGYIPVMMPLSYFIH--DRESVFLAMQQSYGAIAITSSE--SLSTLPANFCRHTPIFAIGEASACLARQKGF 89 (232)
Q Consensus 14 ~~~~~L~~~G~~~i~~Pli~i~~--~~~~~~~~~~~~~d~iiftS~~--av~~~~~~~~~~~~~~~vg~~t~~~~~~~~~ 89 (232)
.+.+.++++|++++..+.-.--+ .........-...|+||+.+.. ...........+.|+..++... ....
T Consensus 21 ~i~~~a~~~Gy~v~v~~~~~~~~~~~~~~l~~l~~~~vdgiIl~~~~~~~~~~~~~~~~~~iPvV~~d~~~-----~~~~ 95 (271)
T d1jyea_ 21 AILSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSD-----QTPI 95 (271)
T ss_dssp HHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEESCCCHHHHHHHHHHTTTSCEEESSSCT-----TSSS
T ss_pred HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCC-----CCCC
T ss_conf 99999998599899997999999999999999996599989951666742699999986399844310234-----4567
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-------HHHHHHHCCCEEEEEEEEEECCCC-CCHHHHH
Q ss_conf 22354445456789998642201277753897215675620-------146898469825676887504689-9988999
Q gi|255764510|r 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH-------FEDYLIEHKIPLRVIDCYYSQDIA-YPETTMK 161 (232)
Q Consensus 90 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~vl~~~g~~~~~~-------l~~~L~~~g~~v~~~~vY~~~~~~-~~~~~~~ 161 (232)
..+. .. .......+.+.... .+.+++.++.|...... +.+.+.+.+........ ..... .......
T Consensus 96 ~~V~--~D-~~~~~~~~~~~L~~-~G~~~i~~i~~~~~~~~~~~R~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 169 (271)
T d1jyea_ 96 NSII--FS-HEDGTRLGVEHLVA-LGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAERE--GDWSAMSGFQQTM 169 (271)
T ss_dssp CEEE--EC-HHHHHHHHHHHHHH-HTCCSEEEEECCTTSHHHHHHHHHHHHHHHHTTCCCSEEEE--CCSSHHHHHHHHH
T ss_pred CCCC--CC-HHHCCCCCEEEEEC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEC--CCCCCCCCCCHHH
T ss_conf 7334--33-11022100012201-12454332223445515776567887776641354210000--1111112442022
Q ss_pred HHH---CCCCEEEEECHHHHHHHHHHCCHHHC----CEEEEECC
Q ss_conf 862---37838998078999999971354405----80399718
Q gi|255764510|r 162 NLL---QNADAILFYARSSVLYFFSLPLPAKI----SAAFLCLS 198 (232)
Q Consensus 162 ~~~---~~~d~i~f~S~~~v~~~~~~~~~~~~----~~~~~~ig 198 (232)
.++ ..+++++..+...+..+.+.+...+. ++.++|++
T Consensus 170 ~~~~~~~~~~ai~~~~~~~a~~~~~~l~~~g~~vp~di~Ii~~d 213 (271)
T d1jyea_ 170 QMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYD 213 (271)
T ss_dssp HHHHTTCCCSEEEESSHHHHHHHHHHHHHTTCCBTTTBEEECSB
T ss_pred HHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 33312456521112320444578786787505688557887652
No 10
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=79.12 E-value=1.6 Score=19.66 Aligned_cols=112 Identities=4% Similarity=-0.108 Sum_probs=65.7
Q ss_pred CCCCCCEEEEEC-CCC----CCCCHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHH-H-CCCCEEEEECHH-----HHH
Q ss_conf 127775389721-567----5620146898469825676887504689998899986-2-378389980789-----999
Q gi|255764510|r 112 LFTPQKPLIYLG-GKP----RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL-L-QNADAILFYARS-----SVL 179 (232)
Q Consensus 112 ~~~~~~~vl~~~-g~~----~~~~l~~~L~~~g~~v~~~~vY~~~~~~~~~~~~~~~-~-~~~d~i~f~S~~-----~v~ 179 (232)
...+..+|++-+ |.+ +...+...|+..|+.|..+..+ ..++.+... . .+.|.|.++|.. .+.
T Consensus 33 ~~gr~pkVlla~~g~D~Hd~G~~~va~~l~~~G~eVi~lg~~------~~~e~iv~aa~~~~advI~iSs~~~~~~~~~~ 106 (168)
T d7reqa2 33 AEGRRPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLF------QTPEETARQAVEADVHVVGVSSLAGGHLTLVP 106 (168)
T ss_dssp HHSSCCEEEEECBTTCCCCHHHHHHHHHHHHTTCEEEECCTT------BCHHHHHHHHHHHTCSEEEEEECSSCHHHHHH
T ss_pred HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEECCCCC------CCHHHHHHHHHCCCCCEEEEECCCCCCHHHHH
T ss_conf 608998699995786177899999999998678514207876------76899999997159988999557653367999
Q ss_pred HHHHHCCHHHC-CEEEEECC---HHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 99971354405-80399718---8999999976996699879999889999986
Q gi|255764510|r 180 YFFSLPLPAKI-SAAFLCLS---NNIASAIPASYKNVVTVACFPKETSLLKLLP 229 (232)
Q Consensus 180 ~~~~~~~~~~~-~~~~~~ig---~~tA~~~~~~g~~~~~va~~p~~~~ll~al~ 229 (232)
.+.+.+...+. ++.+++-| +.-.+.+++.|...+.-+.++-.+...+.+.
T Consensus 107 ~l~~~L~~~g~~~v~VivGG~ip~~d~~~l~~~Gv~~iF~pgt~~~e~a~~~~~ 160 (168)
T d7reqa2 107 ALRKELDKLGRPDILITVGGVIPEQDFDELRKDGAVEIYTPGTVIPESAISLVK 160 (168)
T ss_dssp HHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHHTEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHH
T ss_conf 999999856999718998389898999999968978797968987999999999
No 11
>d2qwxa1 c.23.5.3 (A:1-230) Quinone reductase type 2 (menadione reductase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.30 E-value=1.6 Score=19.65 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=19.2
Q ss_pred CEEEEEC--CHHH------HHHHHHHHHHCCCCEEEECC
Q ss_conf 9389858--9688------69999999987982999421
Q gi|255764510|r 1 MYIVITR--PIKK------ALRTQEKIQKMGYIPVMMPL 31 (232)
Q Consensus 1 M~ilitR--p~~~------a~~~~~~L~~~G~~~i~~Pl 31 (232)
|||||.= |.++ +..+.+.+++.|.++-..=|
T Consensus 3 mKiLiI~ghp~~~S~t~~l~~~~~~~~~~~g~ev~~~dL 41 (230)
T d2qwxa1 3 KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 41 (230)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 879999827998568999999999999967997999986
No 12
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=74.99 E-value=1.3 Score=20.29 Aligned_cols=48 Identities=17% Similarity=0.149 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECHH
Q ss_conf 869999999987982999421000007852001644758799984846
Q gi|255764510|r 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58 (232)
Q Consensus 11 ~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~~ 58 (232)
-|..++..|.+.|+++....+-+....+......++.+||.++|-|+.
T Consensus 20 ~A~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~d~iiigspt 67 (148)
T d1vmea1 20 VMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVST 67 (148)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEECE
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECC
T ss_conf 999999999867996999964544321056766449778886999355
No 13
>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}
Probab=66.94 E-value=3.2 Score=17.87 Aligned_cols=192 Identities=9% Similarity=-0.045 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCC--CCCE----ECCCHHHHHH
Q ss_conf 886999999998798299942100000785200164475879998484679998862001--3630----0041589999
Q gi|255764510|r 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR--HTPI----FAIGEASACL 83 (232)
Q Consensus 10 ~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~~av~~~~~~~~~--~~~~----~~vg~~t~~~ 83 (232)
.+...+.+.|++.|++++..+.-.. .-.++....+...-+..++.....+...+.+ +.|+ +-....|.+.
T Consensus 230 gD~~eik~lLe~~Gi~v~~~~~g~~----s~eei~~~~~A~lNlv~~~~~~~~~A~~Leek~GiP~~~~~~~G~~~T~~~ 305 (477)
T d1m1na_ 230 GDAWSSRILLEEMGLRCVAQWSGDG----SISEIELTPKVKLNLVHCYRSMNYISRHMEEKYGIPWMEYNFFGPTKTIES 305 (477)
T ss_dssp TTTHHHHHHHHHTTCEEEEEEETTC----CHHHHHHGGGCSEEEESCHHHHHHHHHHHHHHHCCCEEECCCSSHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEECCCCC----CHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHH
T ss_conf 1699999999971687589768999----889998611142665506688999999999862755220446750579999
Q ss_pred HHHHCCCCCCCCCCCHH-----HHHHH--HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEEEEEECCCCCC
Q ss_conf 76410122354445456-----78999--864220127775389721567562014689846982567688750468999
Q gi|255764510|r 84 ARQKGFTQIFHGKDNSI-----NLAKI--IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP 156 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~-----~~~~l--l~~~~~~~~~~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~vY~~~~~~~~ 156 (232)
+++.............+ ..... ..........++++.+..|....-.+...|+..|..+... .|....
T Consensus 306 Lr~ia~~~g~~i~~~~e~~i~~e~~~~~~~l~~~r~~l~Gkrv~i~~~~~~~~~l~~~l~elGmevv~~-~~~~~~---- 380 (477)
T d1m1na_ 306 LRAIAAKFDESIQKKCEEVIAKYKPEWEAVVAKYRPRLEGKRVMLYIGGLRPRHVIGAYEDLGMEVVGT-GYEFAH---- 380 (477)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECBSSSHHHHTHHHHHTTTCEEEEE-EESSCC----
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCEEEEE-EECCCC----
T ss_conf 999999848973056899999899999999999987624882799668434899999999879978898-615777----
Q ss_pred HHHHHHHHC--CCCEEEEE--CHHHHHHHHHHCCHHHCCEEEEECCHHHHHHHHHCCCCEEEE
Q ss_conf 889998623--78389980--789999999713544058039971889999999769966998
Q gi|255764510|r 157 ETTMKNLLQ--NADAILFY--ARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTV 215 (232)
Q Consensus 157 ~~~~~~~~~--~~d~i~f~--S~~~v~~~~~~~~~~~~~~~~~~ig~~tA~~~~~~g~~~~~v 215 (232)
.+....... ..+.+++. +......+++...+ -+++-|......+++.|..-..+
T Consensus 381 ~~d~~~~~~~~~~~~~i~~d~~~~el~~~i~~~~p-----DL~ig~~~~k~~a~k~gIP~~~~ 438 (477)
T d1m1na_ 381 NDDYDRTMKEMGDSTLLYDDVTGYEFEEFVKRIKP-----DLIGSGIKEKFIFQKMGIPFREM 438 (477)
T ss_dssp HHHHHTTTTTSCTTCEEEESCBHHHHHHHHHHHCC-----SEEEECHHHHHHHHHTTCCEEES
T ss_pred HHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCC-----CEEEECCHHHHHHHHCCCCCCCC
T ss_conf 67899999866988689568999999999986599-----99997850589999819996217
No 14
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=60.43 E-value=3.5 Score=17.63 Aligned_cols=49 Identities=8% Similarity=0.119 Sum_probs=31.2
Q ss_pred CEEEEECCHH-HHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECH
Q ss_conf 9389858968-86999999998798299942100000785200164475879998484
Q gi|255764510|r 1 MYIVITRPIK-KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57 (232)
Q Consensus 1 M~ilitRp~~-~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~ 57 (232)
|||+|.--.. ...-.++.|++.|.++...|- +.....+.+||.||++-.
T Consensus 2 ~ki~iiD~g~~~~~~i~r~l~~lg~~~~i~~~--------d~~~~~~~~~dgiIl~Gg 51 (196)
T d2a9va1 2 LKIYVVDNGGQWTHREWRVLRELGVDTKIVPN--------DIDSSELDGLDGLVLSGG 51 (196)
T ss_dssp CBEEEEEESCCTTCHHHHHHHHTTCBCCEEET--------TSCGGGGTTCSEEEEEEE
T ss_pred CEEEEEECCCCHHHHHHHHHHHCCCEEEEEEC--------CCCHHHHHCCCCEEEECC
T ss_conf 88999989872999999999978986999939--------899899726880799336
No 15
>d1d4aa_ c.23.5.3 (A:) NAD(P)H:quinone reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.66 E-value=4.6 Score=16.96 Aligned_cols=19 Identities=21% Similarity=0.216 Sum_probs=13.3
Q ss_pred HHHHHHHHHCCCCEEEECC
Q ss_conf 9999999987982999421
Q gi|255764510|r 13 LRTQEKIQKMGYIPVMMPL 31 (232)
Q Consensus 13 ~~~~~~L~~~G~~~i~~Pl 31 (232)
+.+.+.|++.|.++...=|
T Consensus 23 ~~~~~~l~~~G~eV~~~DL 41 (273)
T d1d4aa_ 23 EAAAAALKKKGWEVVESDL 41 (273)
T ss_dssp HHHHHHHHHTTCEEEEEET
T ss_pred HHHHHHHHHCCCEEEEEEC
T ss_conf 9999999878798999988
No 16
>d2gk3a1 c.23.16.9 (A:8-253) Putative cytoplasmic protein STM3548 {Salmonella typhimurium [TaxId: 90371]}
Probab=57.37 E-value=4.8 Score=16.83 Aligned_cols=45 Identities=20% Similarity=0.076 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEEC
Q ss_conf 8699999999879829994210000078520016447587999848
Q gi|255764510|r 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITS 56 (232)
Q Consensus 11 ~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS 56 (232)
.+..+.+.|++.|+++.++|.-+.... .+.....+.+||.||+.-
T Consensus 31 g~~~l~~aL~~~~~~v~~~~~~~~~~~-fP~~~~~l~~yDvvIl~D 75 (246)
T d2gk3a1 31 GATWLLECLRKGGVDIDYMPAHTVQIA-FPESIDELNRYDVIVISD 75 (246)
T ss_dssp SCHHHHHHHHHTTCEEEEECHHHHHHC-CCCSHHHHHTCSEEEEES
T ss_pred CHHHHHHHHHHCCCEEEEECCHHHHHH-CCCCHHHHHCCCEEEEEC
T ss_conf 639999999757950899415013543-754887872389999936
No 17
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}
Probab=55.36 E-value=5.2 Score=16.63 Aligned_cols=52 Identities=10% Similarity=0.082 Sum_probs=22.9
Q ss_pred HCCCCEEEEECHHHHHHHHHH--CCHHHCCEE--EEECCHHHHHHHHHCCCCEEEE
Q ss_conf 237838998078999999971--354405803--9971889999999769966998
Q gi|255764510|r 164 LQNADAILFYARSSVLYFFSL--PLPAKISAA--FLCLSNNIASAIPASYKNVVTV 215 (232)
Q Consensus 164 ~~~~d~i~f~S~~~v~~~~~~--~~~~~~~~~--~~~ig~~tA~~~~~~g~~~~~v 215 (232)
+++.++++..++.-..+..-. +.......+ .-+-.+.-.+.+++.|...++.
T Consensus 69 i~~a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~ 124 (153)
T d1id1a_ 69 IDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILS 124 (153)
T ss_dssp TTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHHTTCCSEEEC
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEC
T ss_conf 40287999904548888899999998589873699976988999999779999998
No 18
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=54.09 E-value=5.4 Score=16.50 Aligned_cols=29 Identities=21% Similarity=0.304 Sum_probs=19.7
Q ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 93898589688699999999879829994
Q gi|255764510|r 1 MYIVITRPIKKALRTQEKIQKMGYIPVMM 29 (232)
Q Consensus 1 M~ilitRp~~~a~~~~~~L~~~G~~~i~~ 29 (232)
|||+|.=-..-+..++..|.+.|++++..
T Consensus 1 M~IvI~G~G~~G~~la~~L~~~g~~v~vi 29 (132)
T d1lssa_ 1 MYIIIAGIGRVGYTLAKSLSEKGHDIVLI 29 (132)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEE
T ss_conf 98999898899999999999779972002
No 19
>d1dxya2 c.23.12.1 (A:1-100,A:300-330) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}
Probab=53.26 E-value=5.6 Score=16.42 Aligned_cols=100 Identities=8% Similarity=0.028 Sum_probs=49.2
Q ss_pred CEEEEECCHHHHHH-HHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECHHHH-HHHHHHHC-CCCC---EE
Q ss_conf 93898589688699-9999998798299942100000785200164475879998484679-99886200-1363---00
Q gi|255764510|r 1 MYIVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL-STLPANFC-RHTP---IF 74 (232)
Q Consensus 1 M~ilitRp~~~a~~-~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~~av-~~~~~~~~-~~~~---~~ 74 (232)
|||+++.+.+.-.. +.+..++.|+++...|-.. . ........++|+|+..+..-+ +.+...+. .+.+ .+
T Consensus 1 MKIl~~~~~~~e~~~l~~~~~~~~~~v~~~~~~~----~-~~~~~~~~~~d~ii~~~~~~~~~~vl~~l~~~~Lk~I~~~ 75 (131)
T d1dxya2 1 MKIIAYGARVDEIQYFKQWAKDTGNTLEYHTEFL----D-ENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIR 75 (131)
T ss_dssp CEEEECSCCTTTHHHHHHHHHHHCCEEEECSSCC----C-TTGGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEES
T ss_pred CEEEEEECCCCCHHHHHHHHHHCCEEEEECCCCC----C-HHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEC
T ss_conf 9899992275758999998877693999868999----8-8999883699899994688889899852334774799871
Q ss_pred CCCHH--HHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 04158--99997641012235444545678999
Q gi|255764510|r 75 AIGEA--SACLARQKGFTQIFHGKDNSINLAKI 105 (232)
Q Consensus 75 ~vg~~--t~~~~~~~~~~~~~~~~~~~~~~~~l 105 (232)
.+|-. =.+++.+.|......+.......++.
T Consensus 76 ~vG~d~ID~~~a~~~gI~V~n~P~~~~~aVAE~ 108 (131)
T d1dxya2 76 NVGTDNIDMTAMKQYGIRLSNVPAYTETAVHNM 108 (131)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCTTSSHHHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
T ss_conf 554466444311343489995799785459999
No 20
>d1vb5a_ c.124.1.5 (A:) Putative eIF-2B subunit 2-like protein PH0440 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=52.40 E-value=5.8 Score=16.34 Aligned_cols=103 Identities=10% Similarity=-0.110 Sum_probs=43.3
Q ss_pred CCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHH-CCCCEEEEECHHHHHHHHHHCCHHHC--
Q ss_conf 777538972156756201468984698256768875046899988999862-37838998078999999971354405--
Q gi|255764510|r 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVLYFFSLPLPAKI-- 190 (232)
Q Consensus 114 ~~~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~vY~~~~~~~~~~~~~~~~-~~~d~i~f~S~~~v~~~~~~~~~~~~-- 190 (232)
..+..|+-.|....-..+.....+.|.... +.+=++.|.-.-.....++. .++++.++.-+ ++-.+++....--.
T Consensus 107 ~~g~~ILT~~~S~tv~~~l~~a~~~gk~~~-V~v~EsrP~~eG~~la~~L~~~GI~vtlI~Ds-a~~~~m~~~d~VivGA 184 (274)
T d1vb5a_ 107 DDGDVIITHSFSSTVLEIIRTAKERKKRFK-VILTESSPDYEGLHLARELEFSGIEFEVITDA-QMGLFCREASIAIVGA 184 (274)
T ss_dssp CTTEEEECCSCCHHHHHHHHHHHHTTCCEE-EEEECCTTTTHHHHHHHHHHHTTCCEEEECGG-GHHHHHTTCSEEEECC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCCEE-EEEECCCCCCCHHHHHHHHHHCCCCEEEECCH-HHHHHHHCCCEEEEEE
T ss_conf 999889981843899999999998699728-99967876555099999998749951784404-8999964088799954
Q ss_pred ------CEEEEECCHH-HHHHHHHCCCCEEEECCC
Q ss_conf ------8039971889-999999769966998799
Q gi|255764510|r 191 ------SAAFLCLSNN-IASAIPASYKNVVTVACF 218 (232)
Q Consensus 191 ------~~~~~~ig~~-tA~~~~~~g~~~~~va~~ 218 (232)
...+--+|.. .|-.++..|.....+|+.
T Consensus 185 d~v~~nG~v~nkiGT~~~A~~Ak~~~vP~~V~a~~ 219 (274)
T d1vb5a_ 185 DMITKDGYVVNKAGTYLLALACHENAIPFYVAAET 219 (274)
T ss_dssp SEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCG
T ss_pred EEEECCCCEEECCCHHHHHHHHHHCCCCCEEECCC
T ss_conf 59953898775450558999999749985473144
No 21
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]}
Probab=51.75 E-value=5.9 Score=16.27 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=32.4
Q ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECHH
Q ss_conf 9389858968869999999987982999421000007852001644758799984846
Q gi|255764510|r 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58 (232)
Q Consensus 1 M~ilitRp~~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~~ 58 (232)
|||-|.-=...-....+.|++.|+++.... ...++.++|.||++-..
T Consensus 7 mkIgii~~~Gn~~s~~~al~~~G~~~~~v~-----------~~~~l~~~D~lIlPGG~ 53 (202)
T d1q7ra_ 7 MKIGVLGLQGAVREHVRAIEACGAEAVIVK-----------KSEQLEGLDGLVLPGGE 53 (202)
T ss_dssp CEEEEESCGGGCHHHHHHHHHTTCEEEEEC-----------SGGGGTTCSEEEECCCC
T ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEC-----------CHHHHHCCCEEEECCCC
T ss_conf 879999789989999999998799299989-----------98997128989987988
No 22
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=49.91 E-value=6.3 Score=16.10 Aligned_cols=95 Identities=11% Similarity=-0.017 Sum_probs=53.7
Q ss_pred CCCHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHH-H-CCCCEEEEEC--HHHHHH---HHHHCCHHH-CCEEEEECC-
Q ss_conf 620146898469825676887504689998899986-2-3783899807--899999---997135440-580399718-
Q gi|255764510|r 128 NFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL-L-QNADAILFYA--RSSVLY---FFSLPLPAK-ISAAFLCLS- 198 (232)
Q Consensus 128 ~~~l~~~L~~~g~~v~~~~vY~~~~~~~~~~~~~~~-~-~~~d~i~f~S--~~~v~~---~~~~~~~~~-~~~~~~~ig- 198 (232)
...+...|+..|++|..+-... | .+.+..+ . .++|.|.+++ ...... +.+.+.... .++.+++-|
T Consensus 20 ~~mva~~l~~~G~~V~~LG~~~--p----~e~iv~a~~~~~~d~v~lS~~~~~~~~~~~~~~~~l~~~~~~~i~iivGG~ 93 (137)
T d1ccwa_ 20 NKILDHAFTNAGFNVVNIGVLS--P----QELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEE--C----HHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEECCCCC--C----HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 9999999997897677223456--9----999999998439877887511441147799999999873148987999478
Q ss_pred --------HHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf --------8999999976996699879999889999986
Q gi|255764510|r 199 --------NNIASAIPASYKNVVTVACFPKETSLLKLLP 229 (232)
Q Consensus 199 --------~~tA~~~~~~g~~~~~va~~p~~~~ll~al~ 229 (232)
+..+..+++.|+..+.-+. .+.+.+++.|.
T Consensus 94 ~~~~~~~~~~~~~~l~~~Gv~~if~~~-t~~~~~~~~l~ 131 (137)
T d1ccwa_ 94 IVVGKQHWPDVEKRFKDMGYDRVYAPG-TPPEVGIADLK 131 (137)
T ss_dssp CSSSSCCHHHHHHHHHHTTCSEECCTT-CCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCCCEEECCC-CCHHHHHHHHH
T ss_conf 677764618789999976978898999-99999999999
No 23
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}
Probab=49.60 E-value=5.3 Score=16.55 Aligned_cols=44 Identities=14% Similarity=0.006 Sum_probs=26.8
Q ss_pred HHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECHH
Q ss_conf 69999999987982999421000007852001644758799984846
Q gi|255764510|r 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58 (232)
Q Consensus 12 a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~~ 58 (232)
+...++.+++.|.++....+.+..+ ......+.+||.|+|-||.
T Consensus 20 A~~Ia~~l~~~g~~v~~~~~~~~~~---~~~~~~~~~~d~ii~Gspt 63 (149)
T d1ycga1 20 AHALMDGLVAGGCEVKLFKLSVSDR---NDVIKEILDARAVLVGSPT 63 (149)
T ss_dssp HHHHHHHHHHTTCEEEEEEGGGSCH---HHHHHHHHHCSEEEEECCC
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCH---HHHHHHHHHCCEEEEEEEC
T ss_conf 9999999875698269997143556---8775436417849999603
No 24
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}
Probab=49.02 E-value=5.2 Score=16.62 Aligned_cols=31 Identities=16% Similarity=0.100 Sum_probs=24.9
Q ss_pred CEEEEECCHH-HHHHHHHHHHHCCCCEEEECC
Q ss_conf 9389858968-869999999987982999421
Q gi|255764510|r 1 MYIVITRPIK-KALRTQEKIQKMGYIPVMMPL 31 (232)
Q Consensus 1 M~ilitRp~~-~a~~~~~~L~~~G~~~i~~Pl 31 (232)
||||||=-.. =+..+++.|.+.|++++..-.
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r 33 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDV 33 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 87999799988999999999868898999204
No 25
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}
Probab=47.76 E-value=6.8 Score=15.89 Aligned_cols=29 Identities=14% Similarity=0.138 Sum_probs=24.3
Q ss_pred CEEEEECCHHH-HHHHHHHHHHCCCCEEEE
Q ss_conf 93898589688-699999999879829994
Q gi|255764510|r 1 MYIVITRPIKK-ALRTQEKIQKMGYIPVMM 29 (232)
Q Consensus 1 M~ilitRp~~~-a~~~~~~L~~~G~~~i~~ 29 (232)
||||||=.... +..++..|.+.|++++.+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~ 30 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIIL 30 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 979998988789999999999784979999
No 26
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}
Probab=47.08 E-value=6.1 Score=16.18 Aligned_cols=44 Identities=18% Similarity=0.139 Sum_probs=24.7
Q ss_pred HHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECHH
Q ss_conf 69999999987982999421000007852001644758799984846
Q gi|255764510|r 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58 (232)
Q Consensus 12 a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~~ 58 (232)
+...++.|.+.|+++....+-+. ..+.....+.+||.++|-||.
T Consensus 20 A~~Ia~~l~~~g~ev~~~~~~~~---~~~~~~~~l~~~d~vi~Gspt 63 (152)
T d1e5da1 20 ARVLAESFRDEGCTVKLMWCKAC---HHSQIMSEISDAGAVIVGSPT 63 (152)
T ss_dssp HHHHHHHHHHTTCEEEEEETTTS---CHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHHHHCCCEEEEEECCCC---CHHHHCCCHHHCCEEEEECCC
T ss_conf 99999998657977998306667---866640113118989994365
No 27
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=45.85 E-value=7.3 Score=15.72 Aligned_cols=64 Identities=11% Similarity=-0.014 Sum_probs=40.4
Q ss_pred CCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCEEEEECHHH
Q ss_conf 7775389721567562014689846982567688750468999889998623783899807899
Q gi|255764510|r 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177 (232)
Q Consensus 114 ~~~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~vY~~~~~~~~~~~~~~~~~~~d~i~f~S~~~ 177 (232)
..++++.++........+.+.++..|..|..+.-+...........+.+++...|+|+..-|.+
T Consensus 40 l~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~pl~ 103 (181)
T d1qp8a1 40 IQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLN 103 (181)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCS
T ss_pred CCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCHHHCCCCCC
T ss_conf 3573478703434653210013201122211246554342045302023220000211012122
No 28
>d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=43.77 E-value=7.9 Score=15.52 Aligned_cols=110 Identities=10% Similarity=-0.013 Sum_probs=66.5
Q ss_pred CCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEEEEEECCCCC--CHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHC
Q ss_conf 2777538972156756201468984698256768875046899--98899986237838998078999999971354405
Q gi|255764510|r 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI 190 (232)
Q Consensus 113 ~~~~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~vY~~~~~~~--~~~~~~~~~~~~d~i~f~S~~~v~~~~~~~~~~~~ 190 (232)
...+++|.++. .- + +.+.+++.+..+ .++++.|... ........+...|++++|.++-+..=++.+.....
T Consensus 119 ~~~g~kV~vIG-~~--P-~v~~l~~~~~~~---~VlE~~p~~gd~p~~~~~~lLp~aD~viiTGsTlvN~Tl~~LL~~~~ 191 (251)
T d2h1qa1 119 EVKGKKVGVVG-HF--P-HLESLLEPICDL---SILEWSPEEGDYPLPASEFILPECDYVYITCASVVDKTLPRLLELSR 191 (251)
T ss_dssp TTTTSEEEEES-CC--T-THHHHHTTTSEE---EEEESSCCTTCEEGGGHHHHGGGCSEEEEETHHHHHTCHHHHHHHTT
T ss_pred CCCCCEEEEEE-CC--H-HHHHHHHCCCCE---EEEECCCCCCCCCCHHHHHHHHCCCEEEEEECHHHCCCHHHHHHHCC
T ss_conf 25798899991-46--6-289998568967---99967888789882677776511889999831554178899997377
Q ss_pred C-EEEEECCHHHH--HHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 8-03997188999--999976996699879999889999986
Q gi|255764510|r 191 S-AAFLCLSNNIA--SAIPASYKNVVTVACFPKETSLLKLLP 229 (232)
Q Consensus 191 ~-~~~~~ig~~tA--~~~~~~g~~~~~va~~p~~~~ll~al~ 229 (232)
+ ..++-+||++- -.+-+.|...+.-..--|.+.++++|+
T Consensus 192 ~a~~vvl~GPS~p~~P~lf~~Gv~~lag~~v~d~~~~~~~i~ 233 (251)
T d2h1qa1 192 NARRITLVGPGTPLAPVLFEHGLQELSGFMVKDNARAFRIVA 233 (251)
T ss_dssp TSSEEEEESTTCCCCGGGGGTTCSEEEEEEESCHHHHHHHHT
T ss_pred CCCEEEEECCCCCCCHHHHHCCCCEEEEEEEECHHHHHHHHH
T ss_conf 677799988986557888836976686789867999999997
No 29
>d2a5la1 c.23.5.8 (A:3-198) Trp repressor binding protein WrbA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=42.87 E-value=8.2 Score=15.44 Aligned_cols=48 Identities=10% Similarity=0.088 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHCCCCEEEECCEEEECCC------------CCCCCCCCCCCCEEEEECHH
Q ss_conf 8699999999879829994210000078------------52001644758799984846
Q gi|255764510|r 11 KALRTQEKIQKMGYIPVMMPLSYFIHDR------------ESVFLAMQQSYGAIAITSSE 58 (232)
Q Consensus 11 ~a~~~~~~L~~~G~~~i~~Pli~i~~~~------------~~~~~~~~~~~d~iiftS~~ 58 (232)
=+...++-+++.|+++....+-++.... ......++.+||.|||-||.
T Consensus 18 la~~i~~g~~~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~ii~gsP~ 77 (196)
T d2a5la1 18 MARQIARGVEQGGFEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLALGSPT 77 (196)
T ss_dssp HHHHHHHHHHHTTCEEEEEBCCCEEC-------------CCBCCHHHHHTCSEEEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCHHHHHHCCEEEEECCH
T ss_conf 999999998636977999853554427887612465333300245566326988993352
No 30
>d5nula_ c.23.5.1 (A:) Flavodoxin {Clostridium beijerinckii [TaxId: 1520]}
Probab=37.05 E-value=10 Score=14.89 Aligned_cols=50 Identities=16% Similarity=-0.057 Sum_probs=31.1
Q ss_pred CEEEEECCHH----HHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECH
Q ss_conf 9389858968----86999999998798299942100000785200164475879998484
Q gi|255764510|r 1 MYIVITRPIK----KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57 (232)
Q Consensus 1 M~ilitRp~~----~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~ 57 (232)
|+|+.--... -+..+++.|.+.|.++...++-+..+ .++.++|.++|-++
T Consensus 1 i~IvY~S~tGnT~~vA~~ia~~l~~~g~~v~~~~~~~~~~-------~~l~~~~~~i~g~p 54 (138)
T d5nula_ 1 MKIVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNI-------DELLNEDILILGCS 54 (138)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHHTTCCCEEEEGGGCCH-------HHHTTCSEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC-------CCCCCCCEEEEEEE
T ss_conf 9999999671799999999999875598442123320233-------31124876999980
No 31
>d1sqsa_ c.23.5.5 (A:) Hypothetical protein SP1951 {(Streptococcus pneumoniae) [TaxId: 1313]}
Probab=36.40 E-value=10 Score=14.82 Aligned_cols=13 Identities=23% Similarity=0.100 Sum_probs=10.0
Q ss_pred CCCCCEEEEECHH
Q ss_conf 4758799984846
Q gi|255764510|r 46 QQSYGAIAITSSE 58 (232)
Q Consensus 46 ~~~~d~iiftS~~ 58 (232)
+.++|.|||.||.
T Consensus 77 i~~AD~iI~~sP~ 89 (232)
T d1sqsa_ 77 LLESDIIIISSPV 89 (232)
T ss_dssp HHHCSEEEEEEEE
T ss_pred HHHCCEEEEEECC
T ss_conf 9968989997140
No 32
>d1guda_ c.93.1.1 (A:) D-allose-binding protein {Escherichia coli [TaxId: 562]}
Probab=34.48 E-value=11 Score=14.64 Aligned_cols=207 Identities=11% Similarity=0.044 Sum_probs=101.9
Q ss_pred HHHHHHHHCCCCEEEECCEEEECCC---CCCCCCCCCCCCEEEEECHH---HHHHHHHHHCCCCCEECCCHHHH-HHHHH
Q ss_conf 9999999879829994210000078---52001644758799984846---79998862001363000415899-99764
Q gi|255764510|r 14 RTQEKIQKMGYIPVMMPLSYFIHDR---ESVFLAMQQSYGAIAITSSE---SLSTLPANFCRHTPIFAIGEASA-CLARQ 86 (232)
Q Consensus 14 ~~~~~L~~~G~~~i~~Pli~i~~~~---~~~~~~~~~~~d~iiftS~~---av~~~~~~~~~~~~~~~vg~~t~-~~~~~ 86 (232)
-+.+.++++|+++..+-.-.-.... ...........|+||+++.+ ....+........++........ .....
T Consensus 22 g~~~~a~~~g~~~~i~~~~~~~d~~~q~~~i~~~i~~~~DgIi~~~~~~~~~~~~l~~~~~~gipvv~~d~~~~~~~~~~ 101 (288)
T d1guda_ 22 GIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKK 101 (288)
T ss_dssp HHHHHHHHHTCCEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHHHHHTTCEEEEESSCCCHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
T ss_conf 99999997399799996589899999999999999669998997247840212899999728974999678876433333
Q ss_pred HCCCCCCCCCCC----HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-------HHHHHHHCCCEEEEEEEEEECCCCC
Q ss_conf 101223544454----56789998642201277753897215675620-------1468984698256768875046899
Q gi|255764510|r 87 KGFTQIFHGKDN----SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH-------FEDYLIEHKIPLRVIDCYYSQDIAY 155 (232)
Q Consensus 87 ~~~~~~~~~~~~----~~~~~~ll~~~~~~~~~~~~vl~~~g~~~~~~-------l~~~L~~~g~~v~~~~vY~~~~~~~ 155 (232)
.+.........+ +....+.+... ...+++++++..|...... +.+.+...+ .++.+..|.......
T Consensus 102 ~~~~~~~~v~~d~~~~g~~~~~~l~~~--~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 178 (288)
T d1guda_ 102 AGGNVEAFVTTDNVAVGAKGASFIIDK--LGAEGGEVAIIEGKAGNASGEARRNGATEAFKKAS-QIKLVASQPADWDRI 178 (288)
T ss_dssp TTCCCSEEEECCHHHHHHHHHHHHHHH--HGGGCEEEEEEECSTTCHHHHHHHHHHHHHHHTCT-TEEEEEEEECTTCHH
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHHH--HCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCC-CCCCCEEEECCCHHH
T ss_conf 478701699457899999999999997--06677446314788533045678876531312223-454330220310256
Q ss_pred CH-HHHHHHH---CCCCEEEEECHHHHHHHHHHCCHHHC--CEEEEEC--CHHHHHHHHHCCCCEEEECCCCCHHHH
Q ss_conf 98-8999862---37838998078999999971354405--8039971--889999999769966998799998899
Q gi|255764510|r 156 PE-TTMKNLL---QNADAILFYARSSVLYFFSLPLPAKI--SAAFLCL--SNNIASAIPASYKNVVTVACFPKETSL 224 (232)
Q Consensus 156 ~~-~~~~~~~---~~~d~i~f~S~~~v~~~~~~~~~~~~--~~~~~~i--g~~tA~~~~~~g~~~~~va~~p~~~~l 224 (232)
.. .....++ .++++|+..+...+....+.+...+. ++.++.+ ++.+.+.+++..+ ...+...|...+-
T Consensus 179 ~~~~~~~~l~~~~~~~~ai~~~~d~~a~g~~~al~~~g~~~di~ivg~D~~~~~~~~i~~g~i-~~ti~~~~~~~g~ 254 (288)
T d1guda_ 179 KALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQM-TATVAQNPADIGA 254 (288)
T ss_dssp HHHHHHHHHHHHCTTCCEEEESSHHHHHHHHHHHHHTTCTTTSEEEEESCCHHHHHHHHHTSS-CEEEECCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCC-EEEEECCHHHHHH
T ss_conf 799888876405765213441487899999999997599987499955798999998644995-2999459999999
No 33
>d1uc8a1 c.30.1.6 (A:1-88) Lysine biosynthesis enzyme LysX, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=33.00 E-value=12 Score=14.49 Aligned_cols=52 Identities=8% Similarity=-0.130 Sum_probs=34.3
Q ss_pred EEEECCHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEE
Q ss_conf 89858968869999999987982999421000007852001644758799984
Q gi|255764510|r 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAIT 55 (232)
Q Consensus 3 ilitRp~~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iift 55 (232)
||..|...+-.++.+.+++.|+++..+...+..-. .......+..+|.++-=
T Consensus 4 ily~~~R~eEk~L~~a~~~rG~~~~~id~~~~~~~-l~~~~~~~~~~D~Vi~R 55 (88)
T d1uc8a1 4 ILYDRIRPDERMLFERAEALGLPYKKVYVPALPMV-LGERPKELEGVTVALER 55 (88)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCEEEEEGGGCCEE-TTBCCGGGTTCCEEEEC
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEEEHHHCEEE-CCCCCCCCCCCCEEEEE
T ss_conf 99726318899999999987993999864442798-56888765778899980
No 34
>d1rlia_ c.23.5.6 (A:) Hypothetical protein YwqN {Bacillus subtilis [TaxId: 1423]}
Probab=33.00 E-value=12 Score=14.49 Aligned_cols=13 Identities=0% Similarity=-0.054 Sum_probs=7.9
Q ss_pred CCCCCCEEEEECH
Q ss_conf 4475879998484
Q gi|255764510|r 45 MQQSYGAIAITSS 57 (232)
Q Consensus 45 ~~~~~d~iiftS~ 57 (232)
.+..+|.|||.||
T Consensus 64 ~l~~AD~ii~~sP 76 (179)
T d1rlia_ 64 RILQCHILIFATP 76 (179)
T ss_dssp HHHTCSEEEEEEE
T ss_pred HHHHCCEEEEEEC
T ss_conf 9996895899602
No 35
>d1rtta_ c.23.5.4 (A:) Hypothetical protein PA1204 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=32.53 E-value=12 Score=14.44 Aligned_cols=28 Identities=7% Similarity=-0.002 Sum_probs=15.8
Q ss_pred CEEEEE----CCHHHHHHHHHHHHHC---CCCEEE
Q ss_conf 938985----8968869999999987---982999
Q gi|255764510|r 1 MYIVIT----RPIKKALRTQEKIQKM---GYIPVM 28 (232)
Q Consensus 1 M~ilit----Rp~~~a~~~~~~L~~~---G~~~i~ 28 (232)
|||++. |+...+..++..+.+. |.++-.
T Consensus 1 MKIl~i~GS~r~~s~s~~l~~~~~~~~~~~~ev~~ 35 (174)
T d1rtta_ 1 IKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIEL 35 (174)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEE
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 97999979899888899999999986579988999
No 36
>d2fz5a1 c.23.5.1 (A:1-137) Flavodoxin {Megasphaera elsdenii [TaxId: 907]}
Probab=31.89 E-value=12 Score=14.38 Aligned_cols=41 Identities=10% Similarity=-0.039 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECH
Q ss_conf 886999999998798299942100000785200164475879998484
Q gi|255764510|r 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57 (232)
Q Consensus 10 ~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~ 57 (232)
.-+..+++.|++.|.++...++-+.. ..++.++|.|+|-|+
T Consensus 15 ~~A~~ia~~l~~~g~~v~~~~~~~~~-------~~~l~~~d~ii~g~p 55 (137)
T d2fz5a1 15 AMANEIEAAVKAAGADVESVRFEDTN-------VDDVASKDVILLGCP 55 (137)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETTSCC-------HHHHHTCSEEEEECC
T ss_pred HHHHHHHHHHHHCCCCEEEEEHHHHH-------HHHHHCCCEEEEEEE
T ss_conf 99999999987569822785435677-------766503653999994
No 37
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}
Probab=29.29 E-value=14 Score=14.11 Aligned_cols=29 Identities=24% Similarity=0.055 Sum_probs=23.4
Q ss_pred CEEEEECCHH-HHHHHHHHHHHCCCCEEEE
Q ss_conf 9389858968-8699999999879829994
Q gi|255764510|r 1 MYIVITRPIK-KALRTQEKIQKMGYIPVMM 29 (232)
Q Consensus 1 M~ilitRp~~-~a~~~~~~L~~~G~~~i~~ 29 (232)
||||||=-.. -+..++..|.+.|.+++..
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~ 30 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVN 30 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 979998887679999999999779978999
No 38
>d1v7ra_ c.51.4.1 (A:) XTP pyrophosphatase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=28.62 E-value=14 Score=14.04 Aligned_cols=30 Identities=20% Similarity=0.142 Sum_probs=25.2
Q ss_pred CEEEE-ECCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 93898-5896886999999998798299942
Q gi|255764510|r 1 MYIVI-TRPIKKALRTQEKIQKMGYIPVMMP 30 (232)
Q Consensus 1 M~ili-tRp~~~a~~~~~~L~~~G~~~i~~P 30 (232)
|||++ |.....-.++...|...|++++.+.
T Consensus 1 MKi~~aT~N~~K~~E~~~lL~~~~i~v~~~~ 31 (186)
T d1v7ra_ 1 MKIFFITSNPGKVREVANFLGTFGIEIVQLK 31 (186)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEECC
T ss_conf 9799988988899999997505597698657
No 39
>d1usga_ c.93.1.1 (A:) Leucine-binding protein {Escherichia coli [TaxId: 562]}
Probab=28.45 E-value=14 Score=14.02 Aligned_cols=94 Identities=9% Similarity=0.051 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCC-----CCCCHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHH-CCCCEEEEEC
Q ss_conf 78999864220127775389721567-----56201468984698256768875046899988999862-3783899807
Q gi|255764510|r 101 NLAKIIVEQKVLFTPQKPLIYLGGKP-----RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYA 174 (232)
Q Consensus 101 ~~~~ll~~~~~~~~~~~~vl~~~g~~-----~~~~l~~~L~~~g~~v~~~~vY~~~~~~~~~~~~~~~~-~~~d~i~f~S 174 (232)
.....+..........+++.++..+. ....+.+.+.+.|..+.....|.... .+....+..+. .++|+|++..
T Consensus 123 ~~~~~~~~~~~~~~~~~~v~i~~~~~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~~-~d~~~~~~~i~~~~~d~v~~~~ 201 (346)
T d1usga_ 123 SQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGE-KDFSALIARLKKENIDFVYYGG 201 (346)
T ss_dssp GHHHHHHHHHHHTTCCSSEEEEECSSHHHHHHHHHHHHHHHHTTCCEEEEEECCTTC-CCCHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC-CCHHHHHHHHHCCCCCEEEEEC
T ss_conf 678888864321145512577327404649999987655413442279887347100-1003577786446987899956
Q ss_pred -HHHHHHHHHHCCHHHCCEEEE
Q ss_conf -899999997135440580399
Q gi|255764510|r 175 -RSSVLYFFSLPLPAKISAAFL 195 (232)
Q Consensus 175 -~~~v~~~~~~~~~~~~~~~~~ 195 (232)
......+++.+...+....++
T Consensus 202 ~~~~~~~~~~~~~~~g~~~~~~ 223 (346)
T d1usga_ 202 YYPEMGQMLRQARSVGLKTQFM 223 (346)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHHHEEECCCCCCCCCEEE
T ss_conf 6366654130012445564277
No 40
>d1wdia_ e.53.1.1 (A:) Queuosine biosynthesis protein queA {Thermus thermophilus [TaxId: 274]}
Probab=27.94 E-value=14 Score=13.97 Aligned_cols=89 Identities=7% Similarity=0.010 Sum_probs=54.7
Q ss_pred CCCCEEEEECCC-CCCCCHHHHHHHCCCEEEEEEEEEE----CCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHH
Q ss_conf 777538972156-7562014689846982567688750----46899988999862378389980789999999713544
Q gi|255764510|r 114 TPQKPLIYLGGK-PRNFHFEDYLIEHKIPLRVIDCYYS----QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA 188 (232)
Q Consensus 114 ~~~~~vl~~~g~-~~~~~l~~~L~~~g~~v~~~~vY~~----~~~~~~~~~~~~~~~~~d~i~f~S~~~v~~~~~~~~~~ 188 (232)
...+.|--|+.. +-.+++.+.|+++|+.+..+..--- .|+. +.+..- .-..-...-|..+++.+.+.-..
T Consensus 174 ~~~GSVAAPTAGLHFt~~ll~~L~~kGi~~~~vTLHVG~GTF~Pv~---~~~~~H-~mH~E~~~i~~~t~~~i~~ak~~- 248 (344)
T d1wdia_ 174 RRPGSVAAPTAGLHFTPELLERLREMGVELRFLTLHVGPGTFRPVK---GDPEKH-EMHAEPYAIPEEVAEAVNRAKAE- 248 (344)
T ss_dssp ------CCCCGGGGCCHHHHHHHHHTTCEEEEEEEEESGGGCCC-------------CCCEEEEECHHHHHHHHHHHHT-
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCC---CCCCCC-CCCCEEEEECHHHHHHHHHHHHC-
T ss_conf 6898751664557789999999997406156799962344335533---432357-88874999839999999999973-
Q ss_pred HCCEEEEECCHHHHHHHHHCC
Q ss_conf 058039971889999999769
Q gi|255764510|r 189 KISAAFLCLSNNIASAIPASY 209 (232)
Q Consensus 189 ~~~~~~~~ig~~tA~~~~~~g 209 (232)
.-+++|+|-++..+++...
T Consensus 249 --g~rIiAVGTT~~RaLEs~~ 267 (344)
T d1wdia_ 249 --GRRVVAVGTTVVRALESAY 267 (344)
T ss_dssp --TCCEEEESHHHHHHHHHTE
T ss_pred --CCCEEEEEHHHHHHHHHHH
T ss_conf --9958999578999999999
No 41
>d2dria_ c.93.1.1 (A:) D-ribose-binding protein {Escherichia coli, strain k-12 [TaxId: 562]}
Probab=27.91 E-value=14 Score=13.96 Aligned_cols=200 Identities=16% Similarity=0.105 Sum_probs=92.9
Q ss_pred HHHHHHHHCCCCEEEECCEEEECCCC-CCCCCCCCCCCEEEEECHH--H-HHHHHHHHCCCCCEECCCHHHHHHHHHHCC
Q ss_conf 99999998798299942100000785-2001644758799984846--7-999886200136300041589999764101
Q gi|255764510|r 14 RTQEKIQKMGYIPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSE--S-LSTLPANFCRHTPIFAIGEASACLARQKGF 89 (232)
Q Consensus 14 ~~~~~L~~~G~~~i~~Pli~i~~~~~-~~~~~~~~~~d~iiftS~~--a-v~~~~~~~~~~~~~~~vg~~t~~~~~~~~~ 89 (232)
-..+.++++|++++.++.-.-..... ..........|++++.+.. + ...+........|+..++... ....
T Consensus 22 gi~~~a~~~g~~~~i~~~~~~~~~~~~~i~~~~~~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~-----~~~~ 96 (271)
T d2dria_ 22 GAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQA-----TKGE 96 (271)
T ss_dssp HHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC-----SSSC
T ss_pred HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCC-----CCCC
T ss_conf 99999997499899996899999999999999862876311212223214789999751421589843665-----5554
Q ss_pred CCCCCCCCCHHHHHHHHHHHH-HCCCCCCEEEEECCCCCCCC-------HHHHHHHCCCEEEEEEEEEECCCCCCHH-HH
Q ss_conf 223544454567899986422-01277753897215675620-------1468984698256768875046899988-99
Q gi|255764510|r 90 TQIFHGKDNSINLAKIIVEQK-VLFTPQKPLIYLGGKPRNFH-------FEDYLIEHKIPLRVIDCYYSQDIAYPET-TM 160 (232)
Q Consensus 90 ~~~~~~~~~~~~~~~ll~~~~-~~~~~~~~vl~~~g~~~~~~-------l~~~L~~~g~~v~~~~vY~~~~~~~~~~-~~ 160 (232)
........ .......+.++. ....++.+++++.|...... +.+.+...+........+.. ...... ..
T Consensus 97 ~~~~V~~d-~~~~g~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~ 173 (271)
T d2dria_ 97 VVSHIASD-NVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVLASQPADF--DRIKGLNVM 173 (271)
T ss_dssp CSEEEEEC-HHHHHHHHHHHHHHHHCTTCEEEEEECCTTCHHHHHHHHHHHHHHHHHTCEEEEEEECTT--CHHHHHHHH
T ss_pred CCEEEEEC-CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECC--HHHHHHHHH
T ss_conf 41388521-336699999999996699967999968988778999987488775123344421000010--233200057
Q ss_pred HHHH---CCCCEEEEECHHHHHHHHHHCCHHHC-CEEEEECC--HHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf 9862---37838998078999999971354405-80399718--899999997699669987999988
Q gi|255764510|r 161 KNLL---QNADAILFYARSSVLYFFSLPLPAKI-SAAFLCLS--NNIASAIPASYKNVVTVACFPKET 222 (232)
Q Consensus 161 ~~~~---~~~d~i~f~S~~~v~~~~~~~~~~~~-~~~~~~ig--~~tA~~~~~~g~~~~~va~~p~~~ 222 (232)
.... .++++|+..+-..+....+.+...+. .+.++++. +.+...+ ..|.....+...|..-
T Consensus 174 ~~~~~~~~~~~ai~~~~d~~a~g~~~al~~~g~~di~iig~d~~~~~~~~i-~~g~~~~ti~~~~~~~ 240 (271)
T d2dria_ 174 QNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDGTPDGEKAV-NDGKLAATIAQLPDQI 240 (271)
T ss_dssp HHHHHHCTTCCEEEESSHHHHHHHHHHHHHHTCCSCEEEEEECCHHHHHHH-HTTSSCEEEECCHHHH
T ss_pred HHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHH-HCCCCEEEEECCHHHH
T ss_conf 788741568507961567878899999998389987667776888999997-4599659995599999
No 42
>d1p90a_ c.55.5.2 (A:) NafY core domain {Azotobacter vinelandii [TaxId: 354]}
Probab=27.72 E-value=14 Score=13.94 Aligned_cols=35 Identities=6% Similarity=-0.060 Sum_probs=28.8
Q ss_pred EECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 97188999999976996699879999889999986
Q gi|255764510|r 195 LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229 (232)
Q Consensus 195 ~~ig~~tA~~~~~~g~~~~~va~~p~~~~ll~al~ 229 (232)
.-||+.-.+.+++.|.+.+.+++..+.+..++.|+
T Consensus 74 ~~iG~~a~~~L~~~GI~vi~~~~~~~ie~al~~l~ 108 (123)
T d1p90a_ 74 VSIGGPAAAKVVRAGIHPLKKPKGCAAQEAIAELQ 108 (123)
T ss_dssp SBCCHHHHHHHHHTTCEEEECTTCEEHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
T ss_conf 77786389999978958999189984999999999
No 43
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=26.95 E-value=15 Score=13.86 Aligned_cols=29 Identities=10% Similarity=0.030 Sum_probs=25.0
Q ss_pred CEEEEE-CCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 938985-89688699999999879829994
Q gi|255764510|r 1 MYIVIT-RPIKKALRTQEKIQKMGYIPVMM 29 (232)
Q Consensus 1 M~ilit-Rp~~~a~~~~~~L~~~G~~~i~~ 29 (232)
|||.|+ =...-+..++..|.+.|++++..
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~ 30 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVG 30 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred CEEEEEECCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 979999488399999999999879989999
No 44
>d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]}
Probab=25.60 E-value=13 Score=14.26 Aligned_cols=48 Identities=13% Similarity=0.042 Sum_probs=22.5
Q ss_pred HHHHHHHHHCCCCEEEECCEEEECCCCCCCC-CCCCCCCEEEEECHHHH
Q ss_conf 9999999987982999421000007852001-64475879998484679
Q gi|255764510|r 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFL-AMQQSYGAIAITSSESL 60 (232)
Q Consensus 13 ~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~-~~~~~~d~iiftS~~av 60 (232)
..++.+|++.|++++..+.+.-.+..-.... ....++|.||.|-.-++
T Consensus 34 ~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~DlvIttGG~s~ 82 (144)
T d1wu2a3 34 IMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAF 82 (144)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-----
T ss_pred HHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCC
T ss_conf 6776641135862267777256389999999975500568987166445
No 45
>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}
Probab=23.88 E-value=17 Score=13.51 Aligned_cols=28 Identities=7% Similarity=0.080 Sum_probs=20.4
Q ss_pred EEEEECCH---HHHHHHHHHHHHCCCCEEEE
Q ss_conf 38985896---88699999999879829994
Q gi|255764510|r 2 YIVITRPI---KKALRTQEKIQKMGYIPVMM 29 (232)
Q Consensus 2 ~ilitRp~---~~a~~~~~~L~~~G~~~i~~ 29 (232)
.+|||=-. .=+..++..|.+.|++++..
T Consensus 10 ~alITGas~~~GIG~aiA~~la~~Ga~V~i~ 40 (256)
T d1ulua_ 10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALS 40 (256)
T ss_dssp EEEEESCCCSSSHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 7999799998669999999999879999998
No 46
>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}
Probab=23.51 E-value=17 Score=13.47 Aligned_cols=27 Identities=15% Similarity=0.098 Sum_probs=21.4
Q ss_pred CEEEEECCHHH-HHHHHHHHHHCCCCEE
Q ss_conf 93898589688-6999999998798299
Q gi|255764510|r 1 MYIVITRPIKK-ALRTQEKIQKMGYIPV 27 (232)
Q Consensus 1 M~ilitRp~~~-a~~~~~~L~~~G~~~i 27 (232)
||||||=.... +..++..|.+.|+++.
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~ 28 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDV 28 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCCC
T ss_conf 9799988877899999999997799766
No 47
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=23.43 E-value=17 Score=13.46 Aligned_cols=29 Identities=10% Similarity=0.067 Sum_probs=24.2
Q ss_pred CEEEEECCHH-HHHHHHHHHHHCCCCEEEE
Q ss_conf 9389858968-8699999999879829994
Q gi|255764510|r 1 MYIVITRPIK-KALRTQEKIQKMGYIPVMM 29 (232)
Q Consensus 1 M~ilitRp~~-~a~~~~~~L~~~G~~~i~~ 29 (232)
||||||=... -+..++..|-+.|++++.+
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~i 31 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIV 31 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 989998998489999999999785989999
No 48
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=23.13 E-value=18 Score=13.42 Aligned_cols=29 Identities=17% Similarity=0.113 Sum_probs=23.8
Q ss_pred CEEEEECCHHH-HHHHHHHHHHCCCCEEEE
Q ss_conf 93898589688-699999999879829994
Q gi|255764510|r 1 MYIVITRPIKK-ALRTQEKIQKMGYIPVMM 29 (232)
Q Consensus 1 M~ilitRp~~~-a~~~~~~L~~~G~~~i~~ 29 (232)
||||||=-... +..++..|.+.|++++.+
T Consensus 16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~ 45 (363)
T d2c5aa1 16 LKISITGAGGFIASHIARRLKHEGHYVIAS 45 (363)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 879997888789999999999782989999
No 49
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}
Probab=22.88 E-value=18 Score=13.39 Aligned_cols=30 Identities=13% Similarity=-0.195 Sum_probs=26.0
Q ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 938985896886999999998798299942
Q gi|255764510|r 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMP 30 (232)
Q Consensus 1 M~ilitRp~~~a~~~~~~L~~~G~~~i~~P 30 (232)
|||+|.=.-.-+..++..|.+.|+++...-
T Consensus 1 MkI~IiGaG~iG~~~a~~L~~~G~~V~~~~ 30 (167)
T d1ks9a2 1 MKITVLGCGALGQLWLTALCKQGHEVQGWL 30 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEE
T ss_conf 989999958999999999998799459997
No 50
>d1mioa_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Clostridium pasteurianum [TaxId: 1501]}
Probab=22.87 E-value=18 Score=13.39 Aligned_cols=132 Identities=11% Similarity=-0.012 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCC--CCCE----ECCCHHHHHH
Q ss_conf 886999999998798299942100000785200164475879998484679998862001--3630----0041589999
Q gi|255764510|r 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR--HTPI----FAIGEASACL 83 (232)
Q Consensus 10 ~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~~av~~~~~~~~~--~~~~----~~vg~~t~~~ 83 (232)
.+..++.+.|++.|+++..++.-... -.++........-+..++.....+...+.+ +.|+ ......|.+.
T Consensus 219 ~D~~eikrlL~~~Gi~v~~~~~g~~s----~eei~~~~~A~lnlv~~~~~~~~~A~~Lee~~GiP~~~~~p~G~~~T~~~ 294 (525)
T d1mioa_ 219 GDAWEMDRVLEKIGYHVNATLTGDAT----YEKVQNADKADLNLVQCHRSINYIAEMMETKYGIPWIKCNFIGVDGIVET 294 (525)
T ss_dssp SHHHHHHHHHHHHTCEEEEEEETTCC----HHHHHBTTSCSEEEESCHHHHHHHHHHHHHHHCCCEEECCCSSHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCC----HHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHH
T ss_conf 30999999999757983586388665----78887435542876406478999999999973932671476660337999
Q ss_pred HHHHCCCCCCCCCCCHHHHHHHHH----------HHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEEE
Q ss_conf 764101223544454567899986----------4220127775389721567562014689846982567688
Q gi|255764510|r 84 ARQKGFTQIFHGKDNSINLAKIIV----------EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDC 147 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~ll~----------~~~~~~~~~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~v 147 (232)
+++.......... .+...+.+. ........++++.+..|....-.+...|+..|..+...-.
T Consensus 295 Lr~ia~~~g~~~~--~~~~ee~I~~e~~~~~~~l~~~~~~L~GKrv~i~~g~~~~~~~~~~l~elGmevv~~g~ 366 (525)
T d1mioa_ 295 LRDMAKCFDDPEL--TKRTEEVIAEEIAAIQDDLDYFKEKLQGKTACLYVGGSRSHTYMNMLKSFGVDSLVAGF 366 (525)
T ss_dssp HHHHHHHSCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEESSSHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 9999998399505--67899999999999999999999760798658836853789999999986996998545
No 51
>d1t9ka_ c.124.1.5 (A:) Probable methylthioribose-1-phosphate isomerase TM0911 {Thermotoga maritima [TaxId: 2336]}
Probab=22.69 E-value=18 Score=13.37 Aligned_cols=101 Identities=7% Similarity=-0.016 Sum_probs=44.0
Q ss_pred CCCCEEEEECCCCCC--------CCHHHHHHHCCCEEEEEEEEEECCCCCCHH--HHH-HHH-CCCCEEEEECHHHHHHH
Q ss_conf 777538972156756--------201468984698256768875046899988--999-862-37838998078999999
Q gi|255764510|r 114 TPQKPLIYLGGKPRN--------FHFEDYLIEHKIPLRVIDCYYSQDIAYPET--TMK-NLL-QNADAILFYARSSVLYF 181 (232)
Q Consensus 114 ~~~~~vl~~~g~~~~--------~~l~~~L~~~g~~v~~~~vY~~~~~~~~~~--~~~-~~~-~~~d~i~f~S~~~v~~~ 181 (232)
..+..|+--|..+.- -.......+.|... .||-++-.+...- ... ++. .++++.++.-+.....+
T Consensus 143 ~~g~~ILThcnsg~lAt~~~gta~~~~~~a~~~g~~~---~v~v~EsrP~~qG~~lta~~L~~~gi~~t~I~Dsa~~~~m 219 (340)
T d1t9ka_ 143 KDGSTILTHCNAGALATVDYGTALGVIRAAVESGKRI---RVFADETRPYLQGARLTAWELMKDGIEVYVITDNMAGWLM 219 (340)
T ss_dssp CTTEEEEECSCCSGGGSSSSCSHHHHHHHHHHTTCCE---EEEEECCTTTTHHHHTHHHHHHTTTCEEEEECGGGHHHHH
T ss_pred CCCCEEEEECCCCCCEEEECHHHHHHHHHHHHCCCEE---EEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHH
T ss_conf 4898799823875100022022566778876359447---9998048987742788777887559846997243066665
Q ss_pred HH-HCCH-----HHC---CEEEEECCHHH-HHHHHHCCCCEEEECC
Q ss_conf 97-1354-----405---80399718899-9999976996699879
Q gi|255764510|r 182 FS-LPLP-----AKI---SAAFLCLSNNI-ASAIPASYKNVVTVAC 217 (232)
Q Consensus 182 ~~-~~~~-----~~~---~~~~~~ig~~t-A~~~~~~g~~~~~va~ 217 (232)
.. .+.. +.. .-.+--+|... |-.++..+.....+|+
T Consensus 220 ~~~~vd~VivGad~v~~nG~v~nkiGT~~~A~~A~~~~vP~~V~a~ 265 (340)
T d1t9ka_ 220 KRGLIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAAP 265 (340)
T ss_dssp HTTCCSEEEECCSEEETTSCEEEETTHHHHHHHHHHTTCCEEEECC
T ss_pred HHCCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEEE
T ss_conf 3055446875000103689887752589998999864874799952
No 52
>d1qp8a2 c.23.12.1 (A:1-82,A:264-302) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=22.40 E-value=18 Score=13.34 Aligned_cols=20 Identities=15% Similarity=0.300 Sum_probs=14.6
Q ss_pred CEEEEECCHHHHHHHHHHHHHC
Q ss_conf 9389858968869999999987
Q gi|255764510|r 1 MYIVITRPIKKALRTQEKIQKM 22 (232)
Q Consensus 1 M~ilitRp~~~a~~~~~~L~~~ 22 (232)
|||+||++.+ .++.+.|++.
T Consensus 1 Mki~v~~~lp--~e~~e~L~~~ 20 (121)
T d1qp8a2 1 MELYVNFELP--PEAEEELRKY 20 (121)
T ss_dssp CEEECCSCCC--HHHHHHHHTT
T ss_pred CEEEEECCCC--HHHHHHHHHC
T ss_conf 9899818899--9999986214
No 53
>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}
Probab=20.92 E-value=20 Score=13.15 Aligned_cols=97 Identities=14% Similarity=0.174 Sum_probs=44.5
Q ss_pred CEEEEECCCCC----CCCHHHHHHHCCCEEEEEEEEEE-CCCCC--CHHHHHHHHCCCCEEEE-ECHHHHHHHHHHCCHH
Q ss_conf 53897215675----62014689846982567688750-46899--98899986237838998-0789999999713544
Q gi|255764510|r 117 KPLIYLGGKPR----NFHFEDYLIEHKIPLRVIDCYYS-QDIAY--PETTMKNLLQNADAILF-YARSSVLYFFSLPLPA 188 (232)
Q Consensus 117 ~~vl~~~g~~~----~~~l~~~L~~~g~~v~~~~vY~~-~~~~~--~~~~~~~~~~~~d~i~f-~S~~~v~~~~~~~~~~ 188 (232)
+++.++..... .....+.|.+.|+.+.-+.+-.. ..... ....+...-..+|.+++ ..+..+...++.+...
T Consensus 14 ksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v~~p~~~v~~~v~~~~~~ 93 (136)
T d1iuka_ 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLAL 93 (136)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCHHHHTTTHHHHHHH
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEECEECCCCHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 96999964699997368999999638997148873035433400003464444057873578841478899999999851
Q ss_pred HCCEEEE---ECCHHHHHHHHHCCCCEE
Q ss_conf 0580399---718899999997699669
Q gi|255764510|r 189 KISAAFL---CLSNNIASAIPASYKNVV 213 (232)
Q Consensus 189 ~~~~~~~---~ig~~tA~~~~~~g~~~~ 213 (232)
+.+..++ ...+..++.+++.|++.+
T Consensus 94 g~k~i~~q~G~~~~e~~~~a~~~Gi~vV 121 (136)
T d1iuka_ 94 RPGLVWLQSGIRHPEFEKALKEAGIPVV 121 (136)
T ss_dssp CCSCEEECTTCCCHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCEEE
T ss_conf 7885998558558999999999599799
Done!