BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|255764510|ref|YP_003065448.2| uroporphyrinogen-III synthase
[Candidatus Liberibacter asiaticus str. psy62]
(232 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|269926447|ref|YP_003323070.1| Uroporphyrinogen-III synthase [Thermobaculum terrenum ATCC BAA-798]
gi|269790107|gb|ACZ42248.1| Uroporphyrinogen-III synthase [Thermobaculum terrenum ATCC BAA-798]
Length = 266
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 74/245 (30%), Gaps = 18/245 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
IVITRP +A + ++ G +P+++P + L SY + TS
Sbjct: 18 KIVITRPNHQANSLVKLLESSGAVPILLPTIEINPNVASSELDAELNALGSYDWVVFTSV 77
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + IG ++ G +S ++
Sbjct: 78 NGVKIFFDRLRQLGLEEVPLSRLKFACIGPSTKSALESYGIRVDVMP--DSYIAEALLQA 135
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ ++ L +R + Y + + Y +K+LL ++
Sbjct: 136 LLDRDVSGQRILLARADSARPVLRKGLEAAGAIVREVPIYRTIPVKYDREYLKDLLAQSN 195
Query: 169 AILFYARSSVLYFFSLPLPAK---ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
AI F + S+V +F S C+ A V VA L+
Sbjct: 196 AITFTSSSTVKHFLDSLGDPSYLPQSLCVACIGPITADTAKELGLRVDVVANVYTVEGLV 255
Query: 226 KLLPL 230
K +
Sbjct: 256 KAIEK 260
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKI------SAAFLCLSNNIASAIPASYKNVVTVAC 217
L + D ++F + + V FF + F C+ + SA+ + V +
Sbjct: 66 LGSYDWVVFTSVNGVKIFFDRLRQLGLEEVPLSRLKFACIGPSTKSALESYGIRVDVMPD 125
Query: 218 FPKETSLLKLLPLR 231
+LL+ L R
Sbjct: 126 SYIAEALLQALLDR 139
>gi|296132654|ref|YP_003639901.1| uroporphyrin-III C-methyltransferase [Thermincola sp. JR]
gi|296031232|gb|ADG82000.1| uroporphyrin-III C-methyltransferase [Thermincola potens JR]
Length = 505
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 74/249 (29%), Gaps = 22/249 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TR ++A EKI+ +G P P + + + Y I +TS
Sbjct: 256 RVLVTRSREQASALSEKIEALGGEPWEFPTIDIAEPDDFGPMDRAIEEIEKYDWIILTSV 315
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + + AIG + + G F N II
Sbjct: 316 NGVKSFFKRLNDKTKDIRDLKGIRLCAIGPKTREELEKYGLRCDFVP--NEYRAEAIIEG 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QN 166
K K ++ D L E + + Y + A ++++L +
Sbjct: 374 LKNEDMSGKKVLLPRADIARKIIPDTLKELGAEVEEVVAYKTVMGAGNAQLLRDMLAEKK 433
Query: 167 ADAILFYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + S+V F + + + ++ V A
Sbjct: 434 LQILTFTSSSTVKNFVQMLDAPNLQDLLADVTVASIGPITSNTAKELGIRVDVEAQEYTI 493
Query: 222 TSLLKLLPL 230
L++ +
Sbjct: 494 DGLVEAILK 502
>gi|260893121|ref|YP_003239218.1| uroporphyrin-III C-methyltransferase [Ammonifex degensii KC4]
gi|260865262|gb|ACX52368.1| uroporphyrin-III C-methyltransferase [Ammonifex degensii KC4]
Length = 508
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 71/247 (28%), Gaps = 21/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR +A R + + +G + P+ + L ++Y + TS
Sbjct: 254 RILVTRARHQASRLSQALTALGGEAIECPVIKIEPPEDWGPLDRALDQAETYDWVVFTSV 313
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ A+G A+A R++G + ++
Sbjct: 314 NGVEHFFRRLRERKKDIRAFTKARFVALGPATAEALRERGLEVADLPEAYRA--EELAES 371
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--N 166
++ P + ++ ED L + + Y+ + + LL+
Sbjct: 372 LRLRVRPGERVLLPRADLARKLLEDALQALGCEVESVVAYHIRPAQERAALARRLLEAGE 431
Query: 167 ADAILFYARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
DA+ F + S+V + + + V A
Sbjct: 432 IDAVTFTSSSTVRFLVKALGEGAGKLLGRVTVASIGPVTSQTARELGLKVDVEAREYTIP 491
Query: 223 SLLKLLP 229
L+ L
Sbjct: 492 GLVAALA 498
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 39/138 (28%), Gaps = 8/138 (5%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETT 159
L++ + K ++ + + L + P
Sbjct: 238 LSRELAWFAGGPLKGKRILVTRARHQASRLSQALTALGGEAIECPVIKIEPPEDWGPLDR 297
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVV 213
+ + D ++F + + V +FF K F+ L A A+ V
Sbjct: 298 ALDQAETYDWVVFTSVNGVEHFFRRLRERKKDIRAFTKARFVALGPATAEALRERGLEVA 357
Query: 214 TVACFPKETSLLKLLPLR 231
+ + L + L LR
Sbjct: 358 DLPEAYRAEELAESLRLR 375
>gi|83590096|ref|YP_430105.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Moorella thermoacetica ATCC 39073]
gi|83573010|gb|ABC19562.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Moorella thermoacetica ATCC 39073]
Length = 520
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 74/247 (29%), Gaps = 22/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TRP +A + +G + P+ + L + I TS+
Sbjct: 258 RVIVTRPRAQAEGLTRSLADLGAEVINFPVIRTEPPADWHPLDTALDAIGEFDWIIFTSA 317
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ I AIG A++ +++G + + +A+ +
Sbjct: 318 NGVRYFWRRLLERHQDIRSLAGIRIAAIGPATSRALKERGLLTDWQPR---EYVAEAVAS 374
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--N 166
+ ++ L + + Y + ++K +L
Sbjct: 375 GLGPRVRGRRVLLPRADIARPFLAVDLRRQGAEVTEVTAYRTVKNEENAGSLKEMLAAGK 434
Query: 167 ADAILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKET 222
A+ F + S+V F L + CL A+ + V A E
Sbjct: 435 VAAVTFTSSSTVRAFLDLLGDGALDLVQGIDVFCLGPVTAATAREAGLQVAATAGEYTEE 494
Query: 223 SLLKLLP 229
L++ +
Sbjct: 495 GLVRAME 501
>gi|302391332|ref|YP_003827152.1| uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III
synthase [Acetohalobium arabaticum DSM 5501]
gi|302203409|gb|ADL12087.1| uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III
synthase [Acetohalobium arabaticum DSM 5501]
Length = 501
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 71/249 (28%), Gaps = 22/249 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR +A +K+ ++G PV P + ++ L Y TS
Sbjct: 256 RILVTRSRTQASSLSKKLYELGGQPVECPAIKIVPPKDLEPLDQALMEADEYDWAVFTSV 315
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ ++ I AIG +A G + +A+ I+
Sbjct: 316 NGVKSVVNRLKELDRDVRAFGDAKICAIGSKTAAELENWGLKVDYVPDK---YVAESILA 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN-LLQNA 167
+ + + L + + + Y + E ++
Sbjct: 373 GLDNDLTGQKFLLPRSDISRSALPEGLKDRGAEVNNVTAYRTVTGEGNEEALELIDKGEV 432
Query: 168 DAILFYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D I F + S+V F + C+ A V +A
Sbjct: 433 DIITFTSSSTVRNFIKMLGDRDYNKLLADVTIACIGPITAGTAEEFGLEVDIIAEEYTID 492
Query: 223 SLLKLLPLR 231
L++ + +
Sbjct: 493 GLVEAVLNK 501
>gi|330470293|ref|YP_004408036.1| uroporphyrinogen iii synthase hem4 [Verrucosispora maris AB-18-032]
gi|328813264|gb|AEB47436.1| uroporphyrinogen iii synthase hem4 [Verrucosispora maris AB-18-032]
Length = 526
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 72/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A +++ G IP +P R + Y + T
Sbjct: 248 KVLVPRTKEQAGVMSARLRAYGAIPCEVPTIAVEPPRTPAQMERAVKGLVDGRYAWVIFT 307
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F H I IGEA+A R G + L
Sbjct: 308 SVNAVRAVWEKFAEHGLDARHFGGVKIACIGEATAEAVRAFGIQPELIPTGEQSSEGLLA 367
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + + Y + A P +++ +
Sbjct: 368 EFSPHDEVLDPVGRVLLPRADIATETLAAGLTERGWEVDDVTAYRTVRAAPPPAEIRDAI 427
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+LF + S+V + + A V
Sbjct: 428 KSGGFDAVLFTSSSTVRNLVGIAGKPHARTVVAVIGPKTAETATEFGLRVDVQPPHASVP 487
Query: 223 SLLKLLP 229
L++ L
Sbjct: 488 DLVEALA 494
>gi|152964588|ref|YP_001360372.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Kineococcus radiotolerans SRS30216]
gi|151359105|gb|ABS02108.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Kineococcus radiotolerans SRS30216]
Length = 607
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 75/247 (30%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A K+ G ++P R + Y I T
Sbjct: 329 RVLVPRTKEQAGGVTAKLSDHGATAEVVPTISVEPPRTPQQMEKAVKGLVTGRYEWIGFT 388
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+G +A R+ G + L +
Sbjct: 389 SVNAVRAVREKFTEYGLDARAFSGLKVAAVGGVTADALREWGIEPDLVPEGEQSASGLLE 448
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L E+ + + Y + A P +++ +
Sbjct: 449 AWPPYDDVLDPINRVFLPRADIATDTLVAGLQENGWEVDDVTAYRTVRAAPPAAPVRDAI 508
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA++F + S+V + S C+ A V +A P
Sbjct: 509 KTGAFDAVVFTSSSTVRNLVGIAGKPHPSTVVACIGPATAKTAEEHGLRVDVLAPEPSAD 568
Query: 223 SLLKLLP 229
+L+ L
Sbjct: 569 ALVDALA 575
>gi|292670851|ref|ZP_06604277.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Selenomonas noxia ATCC 43541]
gi|292647472|gb|EFF65444.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Selenomonas noxia ATCC 43541]
Length = 505
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 75/246 (30%), Gaps = 20/246 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-----SVFLAMQQSYGAIAITS 56
I++TR +A EK++++G + P+ + + + Q Y + TS
Sbjct: 258 RILVTRARAQASALTEKLRELGASCIETPVIRIVPPSDSYAAMDAAIKELQGYHWLIFTS 317
Query: 57 SESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ A + I AIG A+A G K+ ++
Sbjct: 318 VNGVEHFFARLHHAGKDTRALGYAKIAAIGSATAEALHSFGILVDLVPKEFRA--EAVVE 375
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
E + P+ ++ + L H + V+ Y + T + L N
Sbjct: 376 EMMPILPPRARILLPRAHEARDILPEALRTHGAEVDVVSAYKTVPELDDGTEIAKQLMNG 435
Query: 168 DA--ILFYARSSVLYFFSLPLP--AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V A C+ A + +A
Sbjct: 436 KIDFVTFTSSSTVKNLVKQLGNITPLQQAKIACIGPVTAETARSFALEPDIIADTYTIDG 495
Query: 224 LLKLLP 229
L++ +
Sbjct: 496 LIESIK 501
>gi|256380711|ref|YP_003104371.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Actinosynnema mirum DSM 43827]
gi|255925014|gb|ACU40525.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Actinosynnema mirum DSM 43827]
Length = 510
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 72/249 (28%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
+++ R ++A +++ G IPV +P R + Y + T
Sbjct: 240 RVLVPRTKEQAGAMSDRLHSHGAIPVEVPTISVEPPRSPAQMERSVKGLVDGRYQWVVFT 299
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + F I +GEA+A R G + L
Sbjct: 300 STNAVRAVWEKFREFGLDARAFSGVKIACVGEATAAKVRGFGIIPELVPSGEQSSEGLLA 359
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L + + + Y + A P + ++
Sbjct: 360 DFPPYDDILDPVDRVLLPRADIATETLAAGLRDRGWEIDDVTAYRTVRAAPPPADTREMI 419
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+ F + S+V + C+ A V
Sbjct: 420 KSGGFDAVCFTSSSTVRNLVGIAGKPHARTLVACIGPQTAETAREFGLRVDVQPEDANVP 479
Query: 223 SLLKLLPLR 231
+L+ L
Sbjct: 480 ALVDALAQH 488
>gi|71083015|ref|YP_265734.1| uroporphyrinogen III synthase HEM4 [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762560|ref|ZP_01264525.1| Uroporphyrinogen III synthase [Candidatus Pelagibacter ubique
HTCC1002]
gi|71062128|gb|AAZ21131.1| Uroporphyrinogen III synthase HEM4 [Candidatus Pelagibacter ubique
HTCC1062]
gi|91718362|gb|EAS85012.1| Uroporphyrinogen III synthase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 232
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 92/233 (39%), Gaps = 12/233 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M+I+ TRP++ K Q +G+ +PL + + AI TS+ ++
Sbjct: 1 MHILFTRPLEDCHEMILKFQSLGHEISHLPLINIEGLK--YEAPNYSEFKAIIFTSANAV 58
Query: 61 STLP-ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
L N + F +G A+ AR GF +F + N NL ++I++ L
Sbjct: 59 KFLDIKNIDKKLKCFCVGSATEKKARSVGFQNVFAAEGNVSNLKELILQNFK--PSDGKL 116
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYARSS 177
IY+ G+ + + LI + + Y + I + + L+ + Y+++S
Sbjct: 117 IYISGEIISSDLDKELISSGYTIERLINYRANPIEKYDESFIEKLKLKMPEITYIYSQNS 176
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ F + ++ + +C+ +S + + + +E LL
Sbjct: 177 AINFLKVIKNYQLETLWMNTNLMCIGEKTSSILNEIKWKKIFLFNPGEEEFLL 229
>gi|302870085|ref|YP_003838722.1| Uroporphyrinogen III synthase HEM4 [Micromonospora aurantiaca ATCC
27029]
gi|302572944|gb|ADL49146.1| Uroporphyrinogen III synthase HEM4 [Micromonospora aurantiaca ATCC
27029]
Length = 526
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 72/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A +++ G IP +P R + Y + T
Sbjct: 248 KVLVPRTKEQAGVMSARLRAYGAIPCEVPTIAVEPPRTPAQMERAVKGLVDGRYAWVIFT 307
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F H I IG+A+A R G + L
Sbjct: 308 SVNAVRAVWEKFAEHGLDARHFGGVKIACIGDATAEAVRAFGIQPELIPSGEQSSEGLLA 367
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + + Y + A P +++ +
Sbjct: 368 EFSPHDEILDPVGRVLLPRADIATETLAAGLTERGWEVDDVTAYRTVRAAPPPAEIRDAI 427
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+LF + S+V + + A V
Sbjct: 428 KSGGFDAVLFTSSSTVRNLVGIAGKPHARTVVAVIGPKTAETATEFGLRVDVQPPHASVP 487
Query: 223 SLLKLLP 229
L++ L
Sbjct: 488 DLVEALA 494
>gi|227487188|ref|ZP_03917504.1| uroporphyrin-III C-methyltransferase CysG [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227092846|gb|EEI28158.1| uroporphyrin-III C-methyltransferase CysG [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 567
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y + +T
Sbjct: 293 RVLVPRSKEQAGPMSARLASHGAIPQEVPTISVEPPRNPAQMDRAIKGIVEGRYEWVVLT 352
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGK---DNSINLA 103
S ++ L A+G +A G T N+ L
Sbjct: 353 SVNAVKALWRKVTAFGLDARSFAGVKFAAVGAKTAEKIASLGITPELMPPARKQNAHGLV 412
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ E P + + L + I Y + A P ++++
Sbjct: 413 EVFPEYDEDIDPVGRVFMPRADIATDVVAEGLRGLGWEVDDITAYRTVRAAPPSVEIRDM 472
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+++ DA+ F + S+V + C+ A+ V V
Sbjct: 473 IKSGGFDAVCFTSSSTVKNLVGIAGKPHSRTIIACIGPATAATAKEMGLRVDVVPETASI 532
Query: 222 TSLLKLLP 229
SL+ L
Sbjct: 533 VSLVDALA 540
>gi|315503638|ref|YP_004082525.1| uroporphyrinogen iii synthase hem4 [Micromonospora sp. L5]
gi|315410257|gb|ADU08374.1| Uroporphyrinogen III synthase HEM4 [Micromonospora sp. L5]
Length = 526
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 72/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A +++ G IP +P R + Y + T
Sbjct: 248 KVLVPRTKEQAGVMSARLRAYGAIPCEVPTIAVEPPRTPAQMERAVKGLVDGRYAWVIFT 307
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F H I IG+A+A R G + L
Sbjct: 308 SVNAVRAVWEKFAEHGLDARHFGGVKIACIGDATAEAVRAFGIQPELIPSGEQSSEGLLA 367
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + + Y + A P +++ +
Sbjct: 368 EFSPHDEILDPVGRVLLPRADIATETLAAGLTERGWEVDDVTAYRTVRAAPPPAEIRDAI 427
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+LF + S+V + + A V
Sbjct: 428 KSGGFDAVLFTSSSTVRNLVGIAGKPHARTVVAVIGPKTAETATEFGLRVDVQPPHASVP 487
Query: 223 SLLKLLP 229
L++ L
Sbjct: 488 DLVEALA 494
>gi|227541644|ref|ZP_03971693.1| uroporphyrin-III C-methyltransferase CysG [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227182612|gb|EEI63584.1| uroporphyrin-III C-methyltransferase CysG [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 567
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 74/248 (29%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y + +T
Sbjct: 293 RVLVPRSKEQAGPMSARLASHGAIPQEVPTISVEPPRNPAQMDRAIKGIVEGRYEWVVLT 352
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHG---KDNSINLA 103
S ++ L A+G +A G T K N+ L
Sbjct: 353 SVNAVKALWRKVTAFGLDARSFAGVKFAAVGAKTAEKIASLGITPELMPSARKQNAHGLV 412
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ E P + + L + I Y + A P ++++
Sbjct: 413 EVFPEYDEDIDPVGRVFMPRADIATDVVAEGLRGLGWEVDDITAYRTVRAAPPSVEIRDM 472
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+++ DA+ F + S+V + C+ A+ V V
Sbjct: 473 IKSGGFDAVCFTSSSTVKNLVGIAGKPHSRTIIACIGPATAATAKEMGLRVDVVPETASI 532
Query: 222 TSLLKLLP 229
SL+ L
Sbjct: 533 VSLVDALA 540
>gi|302523840|ref|ZP_07276182.1| uroporphyrinogen III synthase/methyltransferase [Streptomyces sp.
AA4]
gi|302432735|gb|EFL04551.1| uroporphyrinogen III synthase/methyltransferase [Streptomyces sp.
AA4]
Length = 510
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 69/249 (27%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
+++ R ++A E+++ G +P R + Y I T
Sbjct: 240 KVLVPRTKEQAGEMAERLRGHGATSHEVPTISVEPPRSPAQMERSVKGLVDGRYQWIVFT 299
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + F I +GE++A R G + L
Sbjct: 300 STNAVRAVWEKFEEFGLDARAFSGVKIACVGESTAAKVRSFGIIPELVPTGEQSSEGLLA 359
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L+E + + Y + A P + ++
Sbjct: 360 EFPPYDDVLDPVNRVLLPRADIATEILSAGLVERGWEVDDVTAYRTVRAAPPPAETREMI 419
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ A V
Sbjct: 420 KTGGFDAVCFTSSSTVRNLVGIAGKPHTRTLVACIGPKTAETAVEFGLRVDVQPEKADVP 479
Query: 223 SLLKLLPLR 231
L+ L
Sbjct: 480 HLVDALAEH 488
>gi|145592924|ref|YP_001157221.1| uroporphyrinogen III synthase HEM4 [Salinispora tropica CNB-440]
gi|145302261|gb|ABP52843.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Salinispora tropica CNB-440]
Length = 526
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 72/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A +++ G IP +P R + Y + T
Sbjct: 248 KVLVPRTKEQAGVMSARLRAYGAIPCEVPTIAVEPPRTPAQMERAVKGLVDGRYAWVIFT 307
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F H I IG+A+A R G + L
Sbjct: 308 SVNAVRAVWEKFAEHGLDARHFGGVKIACIGDATADAVRAFGIRPELVPAGEQSSEGLLA 367
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + + Y + A P +++ +
Sbjct: 368 EFSPHDEVLDPVGRVLLPRADIATETLAAGLTERGWEVDDVTAYRTVRAAPPPAEIRDAI 427
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+LF + S+V + + A V
Sbjct: 428 KSGGFDAVLFTSSSTVRNLVGIAGKPHARTVVAVIGPKTAETATEFGLRVDVQPPHASVP 487
Query: 223 SLLKLLP 229
L++ L
Sbjct: 488 DLVEALA 494
>gi|309810455|ref|ZP_07704281.1| uroporphyrinogen-III synthase [Dermacoccus sp. Ellin185]
gi|308435587|gb|EFP59393.1| uroporphyrinogen-III synthase [Dermacoccus sp. Ellin185]
Length = 549
Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 71/247 (28%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +++ E++ G ++P R + Y + T
Sbjct: 270 NVLVPRTKEQSGSMIERLATHGATSTVVPTISVEPPRTPQQMEKAVKGLVTGRYEWVGFT 329
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNS--INLAK 104
S ++ + F I A+G +A R+ G L +
Sbjct: 330 SVNAVRAVREKFAEFGLDVRAFAGVKIAAVGGVTANALREWGLEADLTPSGEQSAQGLLE 389
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ + P + L E + + Y + A P ++ +
Sbjct: 390 VWADYDEDLDPINRVFLPRADIATDTLVAGLEEMGWEVDDVTAYRTVRAAPPAPEVREAI 449
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + S C+ A V VA
Sbjct: 450 KSGKFDAVCFTSSSTVRNLVGIAGKPHTSTVVACIGPATAKTAEEHGLRVDVVAPEASAA 509
Query: 223 SLLKLLP 229
SL+ L
Sbjct: 510 SLVDALA 516
>gi|117927445|ref|YP_871996.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Acidothermus cellulolyticus 11B]
gi|117647908|gb|ABK52010.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Acidothermus cellulolyticus 11B]
Length = 528
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 80/247 (32%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A EK++ G IPV +P R + Y +A+T
Sbjct: 250 RVLVPRTKEQAAALSEKLRAHGAIPVEVPTISVEPPRTPQQMDRAIRGLVTGRYEWLALT 309
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAK 104
S+ ++ + F + I A+GE +A + R G L
Sbjct: 310 SANAVRAVLEKFEEYGLDARAFSGIKIAAVGEQTAAILRAHGIKPDLVPSGEQSAAGLLA 369
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L+E + + Y + A P ++ +
Sbjct: 370 DFPPYDKVLDPINRVLLPRADIATDTLVAGLVELGWEVEDVTAYRTVRAAPPPAPIREAI 429
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + S C+ A V +A P
Sbjct: 430 KTGGFDAVCFTSSSTVRNLVGIAGKPHASTVIACIGPQTAKTAEEHGLRVDVLAPEPSMA 489
Query: 223 SLLKLLP 229
+L+ L
Sbjct: 490 ALVDALA 496
>gi|300782414|ref|YP_003762705.1| uroporphyrinogen-III synthase [Amycolatopsis mediterranei U32]
gi|299791928|gb|ADJ42303.1| uroporphyrinogen-III synthase [Amycolatopsis mediterranei U32]
Length = 510
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 68/249 (27%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
+++ R ++A E+++ G +P R + Y I T
Sbjct: 240 KVLVPRTKEQAGEMAERLRGHGATSHEVPTISVEPPRSPAQMERSVKGLVDGRYQWIVFT 299
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + F I +GE++A R G + L
Sbjct: 300 STNAVRAVWEKFEEFGLDARAFSGVKIACVGESTAAKVRSFGIIPELIPSGEQSSEGLLA 359
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + + Y + A P + ++
Sbjct: 360 EFPPYDDVLDPVDRVLLPRADIATETLSAGLRERGWEIDDVTAYRTVRAAPPPAETREMI 419
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ A V
Sbjct: 420 KTGGFDAVCFTSSSTVRNLVGIAGKPHTRTLVACIGPKTAETAVEFGLRVDVQPEKADVP 479
Query: 223 SLLKLLPLR 231
L+ L
Sbjct: 480 HLVDALAEH 488
>gi|12655814|gb|AAK00606.1|AF221100_3 uroporphyrinogen III synthase/methyltransferase [Selenomonas
ruminantium subsp. ruminantium]
Length = 505
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 76/247 (30%), Gaps = 20/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-----QQSYGAIAITS 56
I++TR +A + K++K+G + P ++ Y + TS
Sbjct: 261 RILVTRARSQASKLTAKLEKLGAEVLEAPAISMADPADNYAALDKAIDHVADYHWLIFTS 320
Query: 57 SESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + A + + I AIG A+A +Q G ++ ++
Sbjct: 321 ANGVGRFFARLFKAGKDARALGYAKIAAIGLATAEKLKQYGLVADVIPQEYRA--EGVLE 378
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
K P ++ + D L E + V Y + + L+
Sbjct: 379 ALKGKLPPHAKILIPRAEEAREVLPDTLREMGAEVEVAPAYRTICGQVDGEALAAELKEG 438
Query: 168 DA--ILFYARSSVLYFFSLPLPA--KISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + F + S+V ++ A C+ A + +A
Sbjct: 439 NIDLVTFTSSSTVKNLVNIIGSAEVLKGVKTACIGPVTADTAKSLGIEPDIIAKEYTIDG 498
Query: 224 LLKLLPL 230
L++ +
Sbjct: 499 LVEAICK 505
>gi|284034242|ref|YP_003384173.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Kribbella flavida DSM 17836]
gi|283813535|gb|ADB35374.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Kribbella flavida DSM 17836]
Length = 578
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 70/248 (28%), Gaps = 19/248 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I++ R +A +++++ G +P +P R + Y +A T
Sbjct: 301 RILVPRTKDQAGPLMDRLRRYGAMPEEVPTISVEPPRNPQQMDKAIRGLVEGRYEWVAFT 360
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSI--NLAK 104
S ++ + F + I A+GE +A G L +
Sbjct: 361 SVNAVKAVREKFDEYGLDARAFSGLKIAAVGEKTAEAIGAWGIRPDLLPSGEQSAAGLVE 420
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L + + + Y + A P + +
Sbjct: 421 DWPPFDEVLDPINRVFLPRADIATETLVAGLTDLGWEVDDVTAYRTVRAAPPPAPTREAI 480
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA++F + S+V + S + V +A P
Sbjct: 481 KSGKFDAVVFTSSSTVRNLVGIAGKPHASTVIAVIGPATLKTAEEHGLRVDAMAESPSAE 540
Query: 223 SLLKLLPL 230
L L
Sbjct: 541 ELADALAR 548
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 10/121 (8%), Positives = 29/121 (23%), Gaps = 4/121 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+ + R + +G+ + + + + A+ TSS
Sbjct: 434 RVFLPRADIATETLVAGLTDLGWEVDDVTAYRTVRAAPPPAPTREAIKSGKFDAVVFTSS 493
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
++ L + I + + A+ + + F +
Sbjct: 494 STVRNLVGIAGKPHASTVIAVIGPATLKTAEEHGLRVDAMAESPSAEELADALARFGADR 553
Query: 118 P 118
Sbjct: 554 R 554
>gi|147677308|ref|YP_001211523.1| uroporphyrinogen-III methylase and uroporphyrinogen-III synthase
[Pelotomaculum thermopropionicum SI]
gi|146273405|dbj|BAF59154.1| uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase
[Pelotomaculum thermopropionicum SI]
Length = 511
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 73/247 (29%), Gaps = 22/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TR ++A E I+ +G V P + + S+ + TS
Sbjct: 256 RVLVTRSREQASALSEAIEALGGQAVEFPAIRVAEPEDYSPLDRAIEGLDSFRWVIFTSV 315
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + +H + AIG + G + + +I+
Sbjct: 316 NGVESFFRRLRQHRKDIRELRPVRLCAIGPKTREALEAYGLLVDYVP--DEYRAEEIVRG 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
++ D L E + + Y + T ++ +L++ +
Sbjct: 374 LAGKIRAGDRVLLPRADVARKVLPDALAELGADVTEVTAYRTVTGDGGGTPVREMLRDGE 433
Query: 169 AI--LFYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKE 221
F + S+V F L + C+ A+ V VA
Sbjct: 434 IHMITFTSSSTVRNFVKLLGEGGLDRLLAGVKVACIGPITAATARELSIRVDVVAKEYTI 493
Query: 222 TSLLKLL 228
L++ +
Sbjct: 494 EGLVRAI 500
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 26/98 (26%), Gaps = 7/98 (7%)
Query: 139 KIPLRVIDCYYSQDIAYPE-TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA---- 193
+ ++ Y L + ++F + + V FF +
Sbjct: 278 GQAVEFPAIRVAEPEDYSPLDRAIEGLDSFRWVIFTSVNGVESFFRRLRQHRKDIRELRP 337
Query: 194 --FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ A+ A V V + +++ L
Sbjct: 338 VRLCAIGPKTREALEAYGLLVDYVPDEYRAEEIVRGLA 375
>gi|196228308|ref|ZP_03127175.1| uroporphyrin-III C-methyltransferase [Chthoniobacter flavus
Ellin428]
gi|196227711|gb|EDY22214.1| uroporphyrin-III C-methyltransferase [Chthoniobacter flavus
Ellin428]
Length = 508
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 71/242 (29%), Gaps = 16/242 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
IV+TR K+A ++++G +P +E + SY I TS
Sbjct: 262 RIVVTRTRKQAGGLSSTLRRLGADVFELPTIRIEPPKELLEFGQLVQDAHSYDWIVFTSP 321
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ F + I AIG A+ R ++ +
Sbjct: 322 NGVDAFFEMFYKIFNDAREIGGVRIAAIGPATTARVRDFRLHVDLQPEEFVAEGVVRAFQ 381
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ + ++ + L + + V Y + + +
Sbjct: 382 KDGS-VENQRILLARAEQSRDVLPKELTKLGAIVDVAIAYRTVPETEDVSGALARFREEG 440
Query: 169 A--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
A I F + S+V F +L LP + + + + V A L+K
Sbjct: 441 ADLITFTSSSTVENFLALKLPWPTGLKAASIGPITSKTMRDNGLKVDVEASQYDIPGLVK 500
Query: 227 LL 228
+
Sbjct: 501 AI 502
>gi|169831505|ref|YP_001717487.1| uroporphyrin-III C-methyltransferase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638349|gb|ACA59855.1| uroporphyrin-III C-methyltransferase [Candidatus Desulforudis
audaxviator MP104C]
Length = 511
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 67/244 (27%), Gaps = 18/244 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR ++A E+I ++G + P + + ++ +Y I TS
Sbjct: 256 RILVTRSREQASALSERIARLGGEALEFPTIAIRPPDDYGPLDLAISEIDTYQWIVFTSV 315
Query: 58 ESLSTLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ F + + A+ I +
Sbjct: 316 NGVDYFFNRFRELERDIRELGPARLCAIGPRTRDALVGRGLKVAYIPEEYRAERIADGMG 375
Query: 112 LFT-PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
P + ++ + L + + Y + + ++ LL
Sbjct: 376 ALLAPGERVLLPRADIAPSDLAEALTRAGAAVSDVTAYRTVAVGGNAAPVRRLLAEGRVH 435
Query: 171 --LFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F + S+V F + +A +C+ A V VA
Sbjct: 436 AVTFTSSSTVRNFVGALGAEDLPSLLARSAVICIGPVTAQTARELGLKVAAVAREYTIDG 495
Query: 224 LLKL 227
L++
Sbjct: 496 LVQA 499
>gi|238061238|ref|ZP_04605947.1| uroporphyrinogen III synthase HEM4 [Micromonospora sp. ATCC 39149]
gi|237883049|gb|EEP71877.1| uroporphyrinogen III synthase HEM4 [Micromonospora sp. ATCC 39149]
Length = 526
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 72/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A +++ G IP +P R + Y + T
Sbjct: 248 KVLVPRTKEQAGAMSARLRAYGAIPCEVPTIAVEPPRTPAQMERAVKGLVDGRYAWVVFT 307
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F H I IGEA+A R G + L
Sbjct: 308 SVNAVRAVWEKFAEHGLDARHFGGVKIACIGEATADAVRAFGIQPELVPAGEQSSEGLLA 367
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + + Y + A P +++ +
Sbjct: 368 EFSPHDEILDPVGRVLLPRADIATETLAAGLTERGWEVDDVTAYRTVRAAPPPAEIRDAI 427
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+LF + S+V + + A V
Sbjct: 428 KSGGFDAVLFTSSSTVRNLVGIAGKPHARTVVAVIGPKTAETATEFGLRVDVQPQHASVP 487
Query: 223 SLLKLLP 229
L++ L
Sbjct: 488 DLVEALA 494
>gi|119714760|ref|YP_921725.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Nocardioides sp. JS614]
gi|119535421|gb|ABL80038.1| uroporphyrinogen-III C-methyltransferase [Nocardioides sp. JS614]
Length = 552
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 75/247 (30%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A +++ G +P +P R + + Y IA T
Sbjct: 271 RVLVPRTKEQAGSLSARLRGYGAVPDEVPTISVEPPRNPLQMDKAVRGLVEGRYEWIAFT 330
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + I A+G+ +A G L
Sbjct: 331 SVNAVRAVREKFEEYGLDARAFSGLKIAAVGDKTAQAIAGWGLRADLVPSGEQSAAGLLA 390
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
E L P + + L++ + Y + A P ++ +
Sbjct: 391 DWPEYDELLDPINRVFLPRADIATENLVAGLVDLGWECDDVTAYRTVRAAPPPAPTRDAI 450
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA++F + S+V + S + A V +A P
Sbjct: 451 KTGKFDAVVFTSSSTVRNLVGIAGKPHPSTIIAVIGPATAKTAEEHGLRVDVLAAKPDVD 510
Query: 223 SLLKLLP 229
+L+ L
Sbjct: 511 TLVDALA 517
>gi|183600276|ref|ZP_02961769.1| hypothetical protein PROSTU_03836 [Providencia stuartii ATCC 25827]
gi|188020067|gb|EDU58107.1| hypothetical protein PROSTU_03836 [Providencia stuartii ATCC 25827]
Length = 251
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 67/244 (27%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITS 56
M +++TRP I+ G +PL E L + + S
Sbjct: 1 MKVLVTRPEPAGSELVAAIKAKGAEAFALPLIQVGPGAELDLLGSRLQQLTQNDLVFLLS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + ++ S + +++ ++ ++ +
Sbjct: 61 KNAVWYADLTLKQAGRNWSDKLSYYGIGRSTGQYFEALTSKMIRWPEHGETSEALLSLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ F K + L G L + +CY + Y + N
Sbjct: 121 LQFLEGKRALLLRGNGGRELLASTLRSRGAQVEYCECYTRHPVLYDKAEFNQQWVNKGIT 180
Query: 170 -ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + L + L +S IA V VA +L
Sbjct: 181 DIVISSGQMLALLNELIAENTKAWWFNRRLLVVSERIADQARQIGWQQVCVANSADNNAL 240
Query: 225 LKLL 228
L+ L
Sbjct: 241 LEAL 244
>gi|116622287|ref|YP_824443.1| uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III
synthase [Candidatus Solibacter usitatus Ellin6076]
gi|116225449|gb|ABJ84158.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Candidatus Solibacter usitatus Ellin6076]
Length = 494
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 70/236 (29%), Gaps = 12/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
IV+TR ++A + +G + +P +S +A ++Y + TS+
Sbjct: 247 RIVVTRAREQADALGAALSSLGAGVIELPTIEIGPAADSGPLERAIAELETYDWLIFTSA 306
Query: 58 ESLSTLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + I AIG A+ GK+ ++
Sbjct: 307 NGVRFFVERLDDLRKLRSKICAIGPATRAAVEALHVKVDLMGKEYVA--EGLLEAFAAHD 364
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILF 172
K ++ L + + V++ Y + A ++ + + D + F
Sbjct: 365 LAGKRVLLPRAAVARDLVPVELAKRGAQVDVVEAYRTAAPAGLGARVREVFARRPDCVTF 424
Query: 173 YARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ S+V F + + ++ V A L+
Sbjct: 425 TSSSTVRNFVEAAGAGALEGVRVASIGPVTSATARELGVAVTVEARPFTVDGLVDA 480
>gi|256397424|ref|YP_003118988.1| uroporphyrinogen III synthase HEM4 [Catenulispora acidiphila DSM
44928]
gi|256363650|gb|ACU77147.1| Uroporphyrinogen III synthase HEM4 [Catenulispora acidiphila DSM
44928]
Length = 594
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 75/247 (30%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A +++ G + +P R + Y +A T
Sbjct: 315 KVLVPRTKEQAEGLSHRLRTYGAVSHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWVAFT 374
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 375 SQNAVKAIREKFEEYGLDARAFAGIKVAAVGEQTAAALVAFGVQPDLVPSGEQSAAGLLE 434
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + + LIE + + Y + A P ++ +
Sbjct: 435 DFPAYDPVFDPIERVFLPRADIATDTLIAGLIELGWEVDDVTAYRTVRAAPPPAEVREAI 494
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + + C+ A V +A T
Sbjct: 495 KGGGFDAVLFTSSSTVRNLVGIAGKPHAATVIACIGPQTAKTAEEHGLRVDVMAPSASVT 554
Query: 223 SLLKLLP 229
+L L
Sbjct: 555 ALADALA 561
>gi|213964969|ref|ZP_03393168.1| uroporphobilinogen-III synthase [Corynebacterium amycolatum SK46]
gi|213952505|gb|EEB63888.1| uroporphobilinogen-III synthase [Corynebacterium amycolatum SK46]
Length = 555
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 77/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +A ++ G IP+ +P R + Y + T
Sbjct: 281 KVLVPRAKAQAGPMSARLVGHGAIPIEVPTISIEPPRSPAQMERAIKGLVDGRYQWVVFT 340
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLA--- 103
S +++ + F I A+G +A R G T D N A
Sbjct: 341 SVNAVTAVWEKFQEFGLDARSFAGVRIAAVGHRTAAAIRDLGITPELLPDDTRQNAAGIV 400
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ E P ++ D LI+ + + Y + A P ++++
Sbjct: 401 DVFPEYIEDLDPVNRVLLPRADIGTDVLVDGLIDLGWEVDDVVAYRTVRAAPPSADIRDM 460
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+++ DA+ F + S+V + C+ A+ V V
Sbjct: 461 IKSGGFDAVCFTSGSTVKNLVGIAGKPHARTIIACIGPMAAATAREYGLRVDVVPERASI 520
Query: 222 TSLLKLLPLR 231
L+ L
Sbjct: 521 PELVDALAEH 530
>gi|220905469|ref|YP_002480781.1| uroporphyrin-III C-methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869768|gb|ACL50103.1| uroporphyrin-III C-methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 507
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 77/249 (30%), Gaps = 20/249 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR ++A + ++G + P + L Y I TS
Sbjct: 255 VVVTRAREQASGLAASLAELGADVIQCPTIEISPMADYAELDDALNRLAEYRWIIFTSVN 314
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNS-INLAKIIVE 108
+ + + AIG A+A ++G T F + + + ++
Sbjct: 315 GVRHFWLRLAQAGKDSRAIGSCKVAAIGPATAEALTRRGITPDFIPERYVAEGVLEGLLA 374
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
++ K + D L + + VI Y + A+ + + ++
Sbjct: 375 REGGDVKDKRFLLPRAAKAREVLPDELRKAGAVVDVIAAYETIAAAHRKDEVLERIKEGR 434
Query: 169 --AILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKET 222
+ F + S+V F SL + A + A + A
Sbjct: 435 LDCVTFGSSSTVENFLSLIPADVLKAHPEVQLAAIGPITADTLTAHGLPCHIQPEEYTIP 494
Query: 223 SLLKLLPLR 231
+L++ L
Sbjct: 495 ALVEALKKH 503
>gi|312200103|ref|YP_004020164.1| uroporphyrinogen III synthase HEM4 [Frankia sp. EuI1c]
gi|311231439|gb|ADP84294.1| Uroporphyrinogen III synthase HEM4 [Frankia sp. EuI1c]
Length = 617
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 76/246 (30%), Gaps = 19/246 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R ++A + ++ G P+ +P R + + Y +A TS
Sbjct: 344 VLVPRTKEQAAILSDLLRSHGASPLEVPTIAVEPPRTAAPMERAITGLVSGRYQWVAFTS 403
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHG--KDNSINLAKI 105
++ + + AIGEA+A R G + +S L
Sbjct: 404 VNAVKAVQEKVEERSLDARSFAGVKVAAIGEATAEALRSFGIRPDLVPAGQQSSEGLLAD 463
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
E ++ E L E + + Y + A P ++ L+
Sbjct: 464 WPEYDSSLDLLDRVLLPRADIATEILEAGLKERGWQVDDVTAYRTVRAAPPPAPIREALK 523
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA++F + S+V + + C+ A V A S
Sbjct: 524 GGRVDAVVFTSSSTVRNLVGIAGKPHETTVIACIGPKTAETAQELGLRVDVEAPEATIAS 583
Query: 224 LLKLLP 229
L+ L
Sbjct: 584 LVTALA 589
>gi|159036095|ref|YP_001535348.1| uroporphyrinogen III synthase HEM4 [Salinispora arenicola CNS-205]
gi|157914930|gb|ABV96357.1| Uroporphyrinogen III synthase HEM4 [Salinispora arenicola CNS-205]
Length = 526
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 72/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A +++ G IP +P R + Y + T
Sbjct: 248 KVLVPRTKEQAGVMSARLRAYGAIPCEVPTIAVEPPRTPAQMERAVKGLVDGRYAWVIFT 307
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F H I IG+A+A R G + L
Sbjct: 308 SVNAVRAVWEKFAEHGLDARHFGGVKIACIGDATADAVRAFGIRPELVPAGEQSSEGLLA 367
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + + Y + A P +++ +
Sbjct: 368 EFSPHDEVLDPVGRVLLPRADIATETLAAGLTERGWEVDDVTAYRTVRAAPPPAEIRDAI 427
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+LF + S+V + + A V
Sbjct: 428 KSGGFDAVLFTSSSTVRNLVGIAGKPHARTVVSVIGPKTAETATEFGLRVDVQPPHASVP 487
Query: 223 SLLKLLP 229
L++ L
Sbjct: 488 DLVEALA 494
>gi|37528462|ref|NP_931807.1| uroporphyrinogen-III synthase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787900|emb|CAE17017.1| uroporphyrinogen-III synthase (UROS) (uroporphyrinogen-III
cosynthetase) (hydroxymethylbilane hydrolyase
[cyclizing]) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 246
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 69/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP ++Q G PL E + L + + + S
Sbjct: 1 MSILVTRPAPAGEELVRRLQAAGKTAFSAPLINIHPGSELPQLAEKLNPLNTRDMVFLLS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ I+ S LA + ++
Sbjct: 61 KNAVYYANNQLNKINLSWPDKLIYYAIGRSTALAFHQLTGMNVIWSSEGETSEILLKLPS 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G L E + +CY+ Q + YP Q
Sbjct: 121 LHQVENKQALLLRGNGGRELIARTLTERGATVDYCECYFRQPVDYPAAEFSAHWQKYGVQ 180
Query: 170 -ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S +A A V VA +
Sbjct: 181 TLVVTSGEILQLLYNLIPESDRNRWLLHCRLIVVSERLAHAARNLGWQDVKVAKSADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LIQALE 246
>gi|167044208|gb|ABZ08889.1| putative tetrapyrrole (corrin/porphyrin) methylase [uncultured
marine microorganism HF4000_APKG5H11]
Length = 510
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 71/244 (29%), Gaps = 19/244 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TR +A R +++ G V +P + L Y + S+
Sbjct: 255 RVLVTRSRSQASRLCTLLEQAGASTVELPTIQIGPLEDFSELDATLKNIADYQWVIFASA 314
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ ++ F + AIG +A + G T F A ++ E
Sbjct: 315 NAVESVFDRFESQGKDARALAGMTVGAIGPTTAQALSRWGITADFVPSRPVS--AVVLKE 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-A 167
++ E L + + Y + + K +
Sbjct: 373 LSGRDWKDVSVLLPSADIGRDELEKGLTNLGAKVNRLAAYRNVPVEGVSGLAKKAFVDGV 432
Query: 168 DAILFYARSSVLYFFSLP---LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D + F + S+V + A ++ C+ ++ V A L
Sbjct: 433 DIVTFTSSSTVRNLVEMLDGDRAALETSFIACIGPVTSATARELGLQVDLEATEHTVEGL 492
Query: 225 LKLL 228
+ L
Sbjct: 493 VDAL 496
>gi|300721443|ref|YP_003710718.1| uroporphyrinogen III synthase [Xenorhabdus nematophila ATCC 19061]
gi|297627935|emb|CBJ88481.1| uroporphyrinogen III synthase [Xenorhabdus nematophila ATCC 19061]
Length = 246
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 73/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M I+ITRP +++Q +G PL + L+ + + + S
Sbjct: 1 MSILITRPAPAGEELVKRLQAVGKTAFSAPLIEIYSGADLPLLSQKMQRLSAGDLVFLLS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + S L + + + ++
Sbjct: 61 KNAVHYANGQLIQEGHSWPDKLSYYGIGKSTSLMFHQQTGRKISWSEQGETSEDLLQLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K ++ L G L + +CY Q + Y Q +
Sbjct: 121 LQQMDNKKVLLLRGNGGREVIASTLRMRGGEVDYCECYSRQPVKYHAAEFSRHWQQSGIQ 180
Query: 170 -ILFYARSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I+ + + ++L + + +S +A+ + V+ VA +
Sbjct: 181 TIVVTSGEMLQLLYNLVTDSDGKAWLLGCCLIVVSERLANIARSLGWQVIKVAKSADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LMQALE 246
>gi|150387914|ref|YP_001317963.1| uroporphyrin-III C-methyltransferase [Alkaliphilus metalliredigens
QYMF]
gi|149947776|gb|ABR46304.1| uroporphyrin-III C-methyltransferase [Alkaliphilus metalliredigens
QYMF]
Length = 502
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 68/245 (27%), Gaps = 20/245 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR ++A + K++ +G V P ++ + L I TS
Sbjct: 256 RILVTRTREQASQLSTKLKALGGDVVEYPTIEIRPAQDIEGVNAKLKRIHQGDYIIFTSV 315
Query: 58 ESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + AIG A+A +KG + II
Sbjct: 316 NGVKAFFERLKALKMDVREMGPGKLVAIGPATAKALEEKGLLVEVIPETYVA--EGIIDC 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-A 167
K + + L + I+ Y + E ++ LL
Sbjct: 374 LKESIKEGDKVFLPRANIARKALNEGLEALGAQVEEIEIYETVLPVQGEQHLRELLVEGI 433
Query: 168 DAILFYARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D I F + S+V F L S + V A
Sbjct: 434 DWITFTSSSTVQNFMDLLGKEDRHLLESVKIASIGPITGKTAKKLGLPVDVQAKEYTIAG 493
Query: 224 LLKLL 228
L++ +
Sbjct: 494 LVQAM 498
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 35/136 (25%), Gaps = 8/136 (5%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TT 159
L + + L + ++ + + L + + E
Sbjct: 240 LQDELNWFESLPLHGQRILVTRTREQASQLSTKLKALGGDVVEYPTIEIRPAQDIEGVNA 299
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVV 213
+ D I+F + + V FF K+ + + A A+ V
Sbjct: 300 KLKRIHQGDYIIFTSVNGVKAFFERLKALKMDVREMGPGKLVAIGPATAKALEEKGLLVE 359
Query: 214 TVACFPKETSLLKLLP 229
+ ++ L
Sbjct: 360 VIPETYVAEGIIDCLK 375
>gi|256826209|ref|YP_003150169.1| uroporphyrinogen-III synthase [Kytococcus sedentarius DSM 20547]
gi|256689602|gb|ACV07404.1| uroporphyrinogen-III synthase [Kytococcus sedentarius DSM 20547]
Length = 558
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 70/246 (28%), Gaps = 19/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +A + + G ++P R + +Y I T
Sbjct: 281 RVLVPRTKDQAGPMVHALSERGATAHVVPTISVEPPRSPHQMDKAIKGLVTGTYEWIGFT 340
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F I A+G +A R+ G L +
Sbjct: 341 SVNAVRAVKEKFTALGLDVRAFAGLKIAAVGGKTADALREWGLEPDLVPSGEQSARGLLE 400
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L E + I Y + P ++ +
Sbjct: 401 DWPPYDDVLDPINRVFLPRADIATEVLVSGLQERGWEVDDIVAYRTVRATPPPAPVRAAI 460
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+N DA+LF + S+V + S + + A V VA
Sbjct: 461 KNGTYDAVLFTSSSTVRNLVGIAGKPSPSTVVVAIGPATAQTAADLGLRVDAVAEEASSE 520
Query: 223 SLLKLL 228
+++ L
Sbjct: 521 AVIDAL 526
>gi|326329565|ref|ZP_08195887.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Nocardioidaceae bacterium Broad-1]
gi|325952561|gb|EGD44579.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Nocardioidaceae bacterium Broad-1]
Length = 561
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 77/248 (31%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A K++ G +P +P R + Y IA T
Sbjct: 280 RVLVPRTKEQAPALSLKLKGFGAVPEEVPTISVEPPRNPQQMDKAVRGLVEGRYNWIAFT 339
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S ++ + F + I A+GE +A G ++ + A ++
Sbjct: 340 SINAVRAVREKFDEYGLDCRAFSGLKIAAVGEKTAQALEAWGLRPDLVPHTDNQSAAGLL 399
Query: 107 VEQKVLF---TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
P + + L++ + Y + A P ++
Sbjct: 400 EVWPEYDEDLDPINRVFLPRADIATENLIAGLVDLGWECDDVTAYRTVRAAPPPAPTRDA 459
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA++F + S+V + S + A V ++ P
Sbjct: 460 IKTGKFDAVVFTSSSTVRNLVGIAGKPHTSTVIAAIGPATAKTAEEHGLRVDVMSPEPSI 519
Query: 222 TSLLKLLP 229
+L + L
Sbjct: 520 EALTEALA 527
>gi|311744367|ref|ZP_07718169.1| uroporphyrinogen-III C-methyltransferase [Aeromicrobium marinum DSM
15272]
gi|311312333|gb|EFQ82248.1| uroporphyrinogen-III C-methyltransferase [Aeromicrobium marinum DSM
15272]
Length = 568
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 70/247 (28%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I++ R +++ +++ G I +P R + Y IA T
Sbjct: 291 RILVPRTKEQSAGLARRLRGYGAISEEVPTISVEPPRNPQQMDKAVRGLVEGRYEWIAFT 350
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + I A+G+ +A G L +
Sbjct: 351 SVNAVKAVREKFEEYGLDARAFSGLKIAAVGDKTAEAIATWGIRADLVPTGEQSARGLLE 410
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
P + L++ + + Y + A P + +
Sbjct: 411 DWPPYDESLDPINRVFLPRADIATETLVAGLVDLGWEVDDVTAYRTVRAAPPPAPTREAI 470
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + S C+ A V +A P
Sbjct: 471 KSGKFDAVLFTSSSTVRNLVGIAGKPHPSTIIACIGPATAKTAEEHGLRVDVLAESPSVD 530
Query: 223 SLLKLLP 229
L L
Sbjct: 531 VLADALA 537
>gi|84494980|ref|ZP_00994099.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Janibacter sp. HTCC2649]
gi|84384473|gb|EAQ00353.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Janibacter sp. HTCC2649]
Length = 541
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 72/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++ ++++ G +P R + Y + T
Sbjct: 263 NVLVPRTKDQSGTMVRRLERYGAQATTVPTISVEPPRTPQQIERAVKGLVTGRYEWVGFT 322
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + A+G +A R+ G + L
Sbjct: 323 SVNAVRAIREKFEEFGLDARSFAGLKVAAVGGVTADALREWGINPDLVPEGEQSAKGLLD 382
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
L P + L + + + Y + A P +++ +
Sbjct: 383 EWPPFDELLDPINRVFLPRADIATETLVAGLQDMGWEVDDVTAYRTVRAAPPAAHIRDAI 442
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA++F + S+V + S C+ A V +A P
Sbjct: 443 KSGSFDAVVFTSSSTVRNLVGIAGKPHPSTVIACIGPATAKTAEECGLRVDVLAPEPSAD 502
Query: 223 SLLKLLP 229
L+ L
Sbjct: 503 ELVDALA 509
>gi|25027006|ref|NP_737060.1| putative uroporphyrin-III C-methyltransferase CysG [Corynebacterium
efficiens YS-314]
gi|23492286|dbj|BAC17260.1| putative uroporphyrin-III C-methyltransferase CysG [Corynebacterium
efficiens YS-314]
Length = 673
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 74/248 (29%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +A ++ G IP +P R + Y + +T
Sbjct: 401 RVLVPRAKPQAAAMSARLASHGAIPQEVPTISVEPPRNPAQMERAIKGIVEGRYQWVVLT 460
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN---LA 103
S ++ + I A+GE +A R G T N N +
Sbjct: 461 SVNAVRAVWDMITEFGLDSRSFAGVRIAAVGEKTAAEIRALGITPELLPPRNRQNAQGIV 520
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ E P ++ D L+ + + Y + A P ++++
Sbjct: 521 DVFPEYIEELDPVGRVLLPRADIATDVLVDGLVALGWEVDDVVAYRTVRAAPPSADIRDM 580
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ A V + +
Sbjct: 581 IKTGGFDAVCFTSSSTVRNLVGIAGKPHPRTIIACIGPMTADTARELGLRVDVMPEIAEV 640
Query: 222 TSLLKLLP 229
L+ L
Sbjct: 641 PDLVDALA 648
>gi|332702166|ref|ZP_08422254.1| uroporphyrin-III C-methyltransferase [Desulfovibrio africanus str.
Walvis Bay]
gi|332552315|gb|EGJ49359.1| uroporphyrin-III C-methyltransferase [Desulfovibrio africanus str.
Walvis Bay]
Length = 507
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 66/244 (27%), Gaps = 18/244 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR ++A +Q +G P + + Q Y + TS
Sbjct: 256 VVVTRAREQASELLGTLQNLGACCYEFPTISIEPMDDYGPLEDAILRLQDYDWLVFTSVN 315
Query: 59 SLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + A R G+ + ++
Sbjct: 316 GVEFFFKVLHEIGLDARALCGLEVAAIGPATAERLTGYGILPDFVPEKYVAEHVVQGLVE 375
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA-- 169
L K ++ + + L + + V+ Y + A ++ L
Sbjct: 376 LEIKGKKVLIPRAEKAREVLPEELSKAGAQVDVLPVYRTSLAASDPEEVRQALAEERIDY 435
Query: 170 ILFYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ F + S+V FF L +I C+ A + +L
Sbjct: 436 VTFTSSSTVDNFFKLVPAEEIKKHLGHLRLACIGPITAKTLQGYGFTPHIQPEEYTMPAL 495
Query: 225 LKLL 228
++ +
Sbjct: 496 VQAI 499
Score = 38.6 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 12/126 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSS 57
++I R K E++ K G ++P+ Q + + TSS
Sbjct: 382 KVLIPRAEKAREVLPEELSKAGAQVDVLPVYRTSLAASDPEEVRQALAEERIDYVTFTSS 441
Query: 58 ESLSTLP--------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ H + IG +A + GFT ++ ++ + +
Sbjct: 442 STVDNFFKLVPAEEIKKHLGHLRLACIGPITAKTLQGYGFTPHIQPEEYTMPALVQAILE 501
Query: 110 KVLFTP 115
Sbjct: 502 DAAQPK 507
>gi|294630702|ref|ZP_06709262.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. e14]
gi|292834035|gb|EFF92384.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. e14]
Length = 568
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 23/254 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 288 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 347
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 348 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAKALIAFGVKPDLVPSGEQSAAGLLE 407
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 408 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 467
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V +A P
Sbjct: 468 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMAPEPSVH 527
Query: 223 SLLKLLP----LRR 232
L + L RR
Sbjct: 528 KLAEALADFGLRRR 541
>gi|296394052|ref|YP_003658936.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Segniliparus rotundus DSM 44985]
gi|296181199|gb|ADG98105.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Segniliparus rotundus DSM 44985]
Length = 526
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G IPV +P R + Y + TS
Sbjct: 256 VLVPRTKDQAGEMCERLVSHGAIPVEVPTIAVEPARSPAQMERAVKGLVDGRYQWVVFTS 315
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +G A+A R+ G + +L
Sbjct: 316 TNAVRAVWEKFNEFGLDARAFSGVKIACVGPATAKRVREFGIEPELVPEGEQSSLGLLDE 375
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ L + + + Y + A P ++ +++
Sbjct: 376 FPPYDEIFDPVNRVLLPRADIATETLTAGLRDGGWEVDDVTAYRTVRAAPPPAEIREMIK 435
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ V +
Sbjct: 436 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTVETAQEFGLRVDVQPEVASAPA 495
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 496 LVDALAEH 503
>gi|119475319|ref|ZP_01615672.1| Uroporphyrinogen-III synthase [marine gamma proteobacterium
HTCC2143]
gi|119451522|gb|EAW32755.1| Uroporphyrinogen-III synthase [marine gamma proteobacterium
HTCC2143]
Length = 264
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 79/248 (31%), Gaps = 21/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---------QQSYGAI 52
++++TRP +A I+ G + P+ +S + +
Sbjct: 8 HVLVTRPQGQAADLVAAIETAGGCAIHCPVIAIERLSDSDTAEQQRCKQQFMALDQFQHV 67
Query: 53 AITSSESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
S+ ++ ++ P + IG ++ L RQ+G + ++N +
Sbjct: 68 IFISTNAVKYGLQWIDQYWPQLPVGINWYGIGGSTTQLLRQEGVPVNDTVECGTMNSEAL 127
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCY-YSQDIAYPETTMKNLL 164
+ + + + ++ + G + + L + + +CY + + K +
Sbjct: 128 LQHKGLQAFSHQKVLIVRGVGGRDYLQQVLQQRGAEVEYAECYRRRVAVTSTDLISKIVE 187
Query: 165 QNADAILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPK 220
+ + + SV F L P S + +A V A
Sbjct: 188 YEINTVCLNSGESVENFCQLVGPEHWSIIKGLLLVVPGARVAEIAGKKGFERVFCADNAS 247
Query: 221 ETSLLKLL 228
+++ +
Sbjct: 248 NQAMIAAI 255
>gi|302038052|ref|YP_003798374.1| porphyrin biosynthesis protein HemD [Candidatus Nitrospira
defluvii]
gi|300606116|emb|CBK42449.1| Porphyrin biosynthesis protein HemD [Candidatus Nitrospira
defluvii]
Length = 521
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 67/248 (27%), Gaps = 23/248 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
I++TRP +A + I G PV P + + LA +Y + TS
Sbjct: 258 RILVTRPKPQAAEFSDLIAAQGGEPVECPTIEIVPPEDWAPLDRALARLSTYNWLIFTSV 317
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ I IG +A G + ++
Sbjct: 318 NGVAPFMTRLLETQRDVRALSGLTICCIGPRTAEALAAYGLRADVIPEQFQA--EGMLEV 375
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--N 166
++ D L + V+ Y + A + L+
Sbjct: 376 LAARQMRGARVLIPRALVARELLPDQLRTRGADVDVVPVYRTIRPAVETDRLMEQLRTGG 435
Query: 167 ADAILFYARSSVLYFFSLPLPAKI------SAAFLCLSNNIASAIPASYKNVVTVACFPK 220
D I F + S+V F L C+ A+ + V +A
Sbjct: 436 IDVISFTSSSTVRNFVELFPTKDELLRSVGKTTVACIGPITAATAREAGLTVQVMARENT 495
Query: 221 ETSLLKLL 228
+L +
Sbjct: 496 VPALADAI 503
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 43/160 (26%), Gaps = 8/160 (5%)
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
A + L + + + K ++ KP+ F D +
Sbjct: 221 EKAAAAHMEPPTVIVVGEVVRLREQLNWFERRPLFGKRILVTRPKPQAAEFSDLIAAQGG 280
Query: 141 PLRVIDCYYSQDIAYPE--TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL--- 195
L + ++F + + V F + L + L
Sbjct: 281 EPVECPTIEIVPPEDWAPLDRALARLSTYNWLIFTSVNGVAPFMTRLLETQRDVRALSGL 340
Query: 196 ---CLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
C+ A A+ A + + +L++L R+
Sbjct: 341 TICCIGPRTAEALAAYGLRADVIPEQFQAEGMLEVLAARQ 380
>gi|156935871|ref|YP_001439787.1| uroporphyrinogen-III synthase [Cronobacter sakazakii ATCC BAA-894]
gi|156534125|gb|ABU78951.1| hypothetical protein ESA_03754 [Cronobacter sakazakii ATCC BAA-894]
Length = 246
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G PL F RE L + + S
Sbjct: 1 MTILVTRPSPAGEELVSRLRALGQEAWSFPLIEFCPGRELPQLPALLDALAPHDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAI------GEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++S A+ R + + LA + H + ++ +
Sbjct: 61 QHAVSFANAHLQRLGQRWPRAVEAFAIGRTTALALHQVSGLHVHYPRDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L E + +CY Y E + +
Sbjct: 121 LQNVAGKRALILRGNGGRELLGETLTERGATVTFCECYQRSAKIYDGTEEAHRWHTRGIT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + L P + + +S +A+ + VA +
Sbjct: 181 TLVVTSGEMLRQLHDLMPPWYRENWLLRCRLVVVSERLATIARELGWQNILVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|311281517|ref|YP_003943748.1| Uroporphyrinogen III synthase HEM4 [Enterobacter cloacae SCF1]
gi|308750712|gb|ADO50464.1| Uroporphyrinogen III synthase HEM4 [Enterobacter cloacae SCF1]
Length = 246
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP ++ ++Q MG PL F R+ + ++ + + S
Sbjct: 1 MSILVTRPSEQGEELVRRLQAMGREAWSFPLIEFTPGRDLPGLAQAMSALGAGDLLFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ P + + LA + ++ +
Sbjct: 61 QHAVDFAHGQLQQSGLRWPSPPGYFAIGRTTALALHTVSGIDVRYPLDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY Y E M+ +
Sbjct: 121 LQNITGKKALILRGNGGRELLGDTLSARGADVTFCECYQRTPRHYDGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL P + + +S +A + VA +
Sbjct: 181 TLVTTSGEMLQQLWSLIPPWYRERWLLECKMVVVSERLARLARELGWKDIQVADSADNDA 240
Query: 224 LLKLLP 229
LL+ +P
Sbjct: 241 LLRAIP 246
>gi|108804799|ref|YP_644736.1| uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III
synthase [Rubrobacter xylanophilus DSM 9941]
gi|108766042|gb|ABG04924.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Rubrobacter xylanophilus DSM 9941]
Length = 513
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 40/249 (16%), Positives = 74/249 (29%), Gaps = 23/249 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+V+TR +A +++++G V P R+ + S+ + TS
Sbjct: 254 RVVVTRARAQAGELSRRLEELGAAVVEFPTIEIRPPRDFGPLDEAIRGLDSFDWLVFTSV 313
Query: 58 ESLSTLPAN----------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ R I AIG A+A R+ G ++ ++
Sbjct: 314 NGVEAFLERLASHGLDVRAIPRGARIAAIGPATAGRVREAGLRVDVVPREYRA--EALLE 371
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-- 165
E + ++ + L E + V Y + A + LQ
Sbjct: 372 EISGEPLRGRRVLIPRAARAREVLPERLREAGAEVSVPPAYETVPSAEGREELARGLQAG 431
Query: 166 NADAILFYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
D + F A S+V F + C+ A+A V A
Sbjct: 432 EVDCVTFTASSTVENFVAAFGAREAARLLAGTRVACIGPITAAAARERGLRVDVEAGEYT 491
Query: 221 ETSLLKLLP 229
L++ +
Sbjct: 492 IEGLVRAVA 500
>gi|155967345|gb|ABU41509.1| HemD [Heliophilum fasciatum]
Length = 512
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 75/250 (30%), Gaps = 25/250 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
IV+TR ++A +++++G P P + +A Q Y I TS
Sbjct: 258 RIVVTRSRQQASAFAGRLEELGAEPWEFPTIDIQEPADLKPLDNAIAHIQDYSWIVFTSP 317
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ +++ + + AIG + ++ G + ++ II
Sbjct: 318 NGVEHFFSHYFSAGHDIRDLQGIQLCAIGPQTKKEVQKYGLKVDYVPEEFRQ--EAIIEG 375
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
K K ++ + L+ + + Y + + +K ++ +
Sbjct: 376 LKNYDWQGKKVLLPRADIARKELPEALVRFGAIVDDVVTYRTVRGSGDAGILKQMMNDKM 435
Query: 169 A--ILFYARSSVLYFFSLPLPA--------KISAAFLCLSNNIASAIPASYKNVVTVACF 218
+ F + S+ F + + + + A V A
Sbjct: 436 ISAVTFTSSSTARNFVEMLGVEDAAELQRLLEGVTLASIGPVTSETMRALGLRVDVEATE 495
Query: 219 PKETSLLKLL 228
L K L
Sbjct: 496 YTIPGLTKAL 505
>gi|259508511|ref|ZP_05751411.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Corynebacterium efficiens YS-314]
gi|259163923|gb|EEW48477.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Corynebacterium efficiens YS-314]
Length = 626
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 74/248 (29%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +A ++ G IP +P R + Y + +T
Sbjct: 354 RVLVPRAKPQAAAMSARLASHGAIPQEVPTISVEPPRNPAQMERAIKGIVEGRYQWVVLT 413
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN---LA 103
S ++ + I A+GE +A R G T N N +
Sbjct: 414 SVNAVRAVWDMITEFGLDSRSFAGVRIAAVGEKTAAEIRALGITPELLPPRNRQNAQGIV 473
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ E P ++ D L+ + + Y + A P ++++
Sbjct: 474 DVFPEYIEELDPVGRVLLPRADIATDVLVDGLVALGWEVDDVVAYRTVRAAPPSADIRDM 533
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ A V + +
Sbjct: 534 IKTGGFDAVCFTSSSTVRNLVGIAGKPHPRTIIACIGPMTADTARELGLRVDVMPEIAEV 593
Query: 222 TSLLKLLP 229
L+ L
Sbjct: 594 PDLVDALA 601
>gi|320178095|gb|EFW53075.1| Porphobilinogen deaminase [Shigella boydii ATCC 9905]
Length = 559
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 314 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 373
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 374 QHAVAFAQSQLHQQDRKWPQLPTYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 433
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 434 LQNIAGKRALILRGNGGRELIGDTLTVRGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 493
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 494 MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 553
Query: 224 LLKLLP 229
LL+ L
Sbjct: 554 LLRALQ 559
>gi|290477118|ref|YP_003470031.1| uroporphyrinogen III synthase [Xenorhabdus bovienii SS-2004]
gi|289176464|emb|CBJ83273.1| uroporphyrinogen III synthase [Xenorhabdus bovienii SS-2004]
Length = 246
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 72/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP + ++++ MG I PL + S L + + + S
Sbjct: 1 MSILITRPDPAGEQLAKRLRAMGKIAFSAPLITIYPGGDLPLLSQKLQRLSAGDLVFLLS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + S L + + ++
Sbjct: 61 KNAVHYANEQLLQEGLSWPDKLSYYGIGKSTSLMFHQKTGLEILWPEQGETSEDLLQLPI 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K ++ L G LI + +CY Q I Y Q
Sbjct: 121 LQRVNDKKILLLRGNGGREVIASTLINRGGKVDYCECYSRQPIKYHVADFSRHWQQYGIK 180
Query: 170 -ILFYARSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L +S + +S +A+ + VA +
Sbjct: 181 TLVVTSGEMLQLLYNLATDDDGKAWLLSCYLIVVSERLANIAQTLGWQTIKVAKSADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LMQALE 246
>gi|290958355|ref|YP_003489537.1| uroporphyrinogen-III synthase [Streptomyces scabiei 87.22]
gi|260647881|emb|CBG70986.1| putative uroporphyrinogen-III synthase [Streptomyces scabiei 87.22]
Length = 583
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 23/254 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 303 RVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 362
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 363 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTANALIAFGVKPDLVPSGEQSAAGLLE 422
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 423 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 482
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V +A P
Sbjct: 483 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMAPEPSVH 542
Query: 223 SLLKLLP----LRR 232
L + L RR
Sbjct: 543 KLAEALADFGVRRR 556
>gi|223939089|ref|ZP_03630973.1| uroporphyrin-III C-methyltransferase [bacterium Ellin514]
gi|223892249|gb|EEF58726.1| uroporphyrin-III C-methyltransferase [bacterium Ellin514]
Length = 513
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 74/251 (29%), Gaps = 21/251 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
IV+TR +A + ++++ + + +P + LA +Y I TS
Sbjct: 257 RIVVTRTRDQASQLSQQLKDLSAEVLEIPTIKIVPTDHKAELADALLELNAYDWIVFTSP 316
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ +F + I A+G A+A ++ ++ +
Sbjct: 317 NGVTMFFESFFKAFEDMRDFGGMRIAAVGPATAAKLKELHLKVELMPEEYVTAKIARAFQ 376
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
++ + + N L + I CY + L +
Sbjct: 377 DFESIENL-KILLMRAEAANPELPKELEGMGAIVDDIACYKTVPETEDANGAAAKLLESG 435
Query: 168 -DAILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
D I F + S+V F + + + + A+ A
Sbjct: 436 ADWITFTSSSTVENFHTRFDLPALLQKYPQIKLASIGPETSKALEILGLTPTVEAKPHTI 495
Query: 222 TSLLKLLPLRR 232
L+K L +
Sbjct: 496 DGLVKALEKHQ 506
>gi|328883226|emb|CCA56465.1| Uroporphyrinogen-III methyltransferase or Uroporphyrinogen-III
synthase [Streptomyces venezuelae ATCC 10712]
Length = 556
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 76/254 (29%), Gaps = 23/254 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 277 RVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 336
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 337 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALVDFGVKPDLVPSGEQSAAGLLE 396
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 397 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPADTREAI 456
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 457 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVH 516
Query: 223 SLLKLLP----LRR 232
L + L RR
Sbjct: 517 KLAEALADFGLRRR 530
>gi|257054364|ref|YP_003132196.1| uroporphyrinogen-III synthase /uroporphyrinogen-III
C-methyltransferase [Saccharomonospora viridis DSM
43017]
gi|256584236|gb|ACU95369.1| uroporphyrinogen-III synthase /uroporphyrinogen-III
C-methyltransferase [Saccharomonospora viridis DSM
43017]
Length = 516
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 71/249 (28%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A E+I G P +P R + Y + T
Sbjct: 241 KVLVPRTKEQAGDMAERILSHGATPHEVPTISVEPPRSPAQMERAVKGLVDGRYQWLVFT 300
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + F I +GEA+A R G K + L +
Sbjct: 301 SANAVRAVWEKFNEFGLDARAFSGVKIACVGEATADRVRSFGIIPELVPKGEQSSEGLLQ 360
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + + Y + A P + ++
Sbjct: 361 EFPPYDDVLDPVNRVLLPRADIATEILSAGLQERGWEVDDVTAYRTVRAAPPPAETREMI 420
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ A V P
Sbjct: 421 KTGGFDAVCFTSSSTVRNLVGIAGKPHARTLVACIGPKTAETATEFGLRVDVRPEQPNAV 480
Query: 223 SLLKLLPLR 231
L+ L
Sbjct: 481 MLVDALAEH 489
>gi|146313620|ref|YP_001178694.1| uroporphyrinogen-III synthase [Enterobacter sp. 638]
gi|145320496|gb|ABP62643.1| uroporphyrinogen-III synthase [Enterobacter sp. 638]
Length = 246
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP + +++ +G + PL F RE LA Q + S
Sbjct: 1 MNILVTRPSPAGEQLVSRLRALGQVAWSFPLIEFSPGRELSTLADSLYALQEGDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ A + + + LA + ++ +
Sbjct: 61 QHAVEFAQAQLQQENKRWPTAPRYFAIGRTTALALHTVSGIDVRYPLDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + + +CY Y E M+ L+ D
Sbjct: 121 LQTVAGKRALVLRGNGGRELLGETLTDRGAEVTFCECYQRCAKYYDGAEEAMRWHLRGVD 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A+ + +A +
Sbjct: 181 TLVVTSGEMLQQLWSLIPQWYRENWLLRCRLLVVSERLANLARELGWQDIRIADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|187735398|ref|YP_001877510.1| uroporphyrin-III C-methyltransferase [Akkermansia muciniphila ATCC
BAA-835]
gi|187425450|gb|ACD04729.1| uroporphyrin-III C-methyltransferase [Akkermansia muciniphila ATCC
BAA-835]
Length = 506
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 70/247 (28%), Gaps = 18/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
IV+TR +A +++++G + MP+ A +Y + +S
Sbjct: 256 RIVVTRTRAQAGELSARLRRLGAEVLEMPVIRIAPPSNRREFAESVVHAHTYDWLVFSSP 315
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINL---AKI 105
+ F I AIG + R+ G K A
Sbjct: 316 NGVERFFQAFFAVYRDIRSIGGARIAAIGPGTEAKLREYGLAVDVMPKKFVAEGLVKAFR 375
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+++ +++ G+ D L + Y ++ + +
Sbjct: 376 DAREEIGTIEHSTFLWVRGEEARRVIYDGLNALGAIVDECIAYKTEAETEDVAGAQAAFR 435
Query: 166 NA--DAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D + F + S+ FF L LP + + + A
Sbjct: 436 ERGADIVTFTSSSTAENFFKLGLPWPEGCRAASIGPVTTATLKELGHAPSITAKTHDING 495
Query: 224 LLKLLPL 230
L++ +
Sbjct: 496 LVEAIVK 502
>gi|323701816|ref|ZP_08113486.1| uroporphyrin-III C-methyltransferase [Desulfotomaculum nigrificans
DSM 574]
gi|323533120|gb|EGB22989.1| uroporphyrin-III C-methyltransferase [Desulfotomaculum nigrificans
DSM 574]
Length = 510
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 69/247 (27%), Gaps = 22/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+V+TR ++A I+ +G P + + +SY + TS
Sbjct: 256 RVVVTRSREQASVLSAAIEALGGEAWEFPTIQIAPPEDFAPLDNAINDVRSYRWVIFTSV 315
Query: 58 ESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ + I AIG + +G + + +I+
Sbjct: 316 NGVNMFFDRMRANGRDIRDLSDVRICAIGPRTRDELANRGLLVDYVPGEYRA--EEIVAG 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
K P ++ L E + + Y + ++ L N +
Sbjct: 374 LKDKVLPGDRVLLPRADIARKVLPQALAEMGAEVHEVTAYCTVLGDGDAAAIRQGLVNGE 433
Query: 169 AIL--FYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + S+V F L ++ + + V A
Sbjct: 434 ISVVTFTSSSTVQNFVKLIGEEELPKLMDKVVVASIGPITSRTARELGLRVDVEAKEYTI 493
Query: 222 TSLLKLL 228
L++ +
Sbjct: 494 DGLVQAI 500
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/190 (7%), Positives = 40/190 (21%), Gaps = 11/190 (5%)
Query: 53 AITSSESLSTLPANFCRHTPIFAI---GEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
S ++ L R + A R + + L +
Sbjct: 188 FGRSPDTPVALIRWGTRPEQRTITGTLDDIYAKAIRAQFKNPAIIIVGEVVKLRDKLAWF 247
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNA 167
+ K ++ + + + N +++
Sbjct: 248 EKKPLFGKRVVVTRSREQASVLSAAIEALGGEAWEFPTIQIAPPEDFAPLDNAINDVRSY 307
Query: 168 DAILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTVACFPKE 221
++F + + V FF + + V V +
Sbjct: 308 RWVIFTSVNGVNMFFDRMRANGRDIRDLSDVRICAIGPRTRDELANRGLLVDYVPGEYRA 367
Query: 222 TSLLKLLPLR 231
++ L +
Sbjct: 368 EEIVAGLKDK 377
>gi|296138402|ref|YP_003645645.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Tsukamurella paurometabola DSM 20162]
gi|296026536|gb|ADG77306.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Tsukamurella paurometabola DSM 20162]
Length = 567
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 75/246 (30%), Gaps = 19/246 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A +++ G IP+ +P R + Y + TS
Sbjct: 298 VLVPRTKDQAADMSNRLRGHGAIPMEVPTIAVEPPRSPAQMERAVKGLVDGRYQWVVFTS 357
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE +A R G +L ++
Sbjct: 358 TNAVRAVWEKFTEFGLDARAFSGVKIACVGEQTAAKVRAFGIEPELLPTGEQSSLGMLEV 417
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L + + + Y + A P + + +++
Sbjct: 418 FPPFDDVFDPVNRVLLPRADIATETLAEGLRDRGWEIDDVTAYRTVRAAPPPASTREMIK 477
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ DA+ F + S+V + C+ A V
Sbjct: 478 TGDFDAVCFTSSSTVRNLVGIAGKPHSRTIVACIGPKTAETAIEFGLRVDVQPETASVED 537
Query: 224 LLKLLP 229
L++ L
Sbjct: 538 LVEALA 543
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E ++ G+ + + + + + A+ TSS
Sbjct: 430 RVLLPRADIATETLAEGLRDRGWEIDDVTAYRTVRAAPPPASTREMIKTGDFDAVCFTSS 489
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVLF 113
++ L + + IG +A A + G + + +L + +
Sbjct: 490 STVRNLVGIAGKPHSRTIVACIGPKTAETAIEFGLRVDVQPETASVEDLVEALAAHASRL 549
Query: 114 TPQKPLIYLGGKPRN 128
+ L KPR
Sbjct: 550 RAEGTLPPPRKKPRR 564
>gi|225175615|ref|ZP_03729609.1| uroporphyrin-III C-methyltransferase [Dethiobacter alkaliphilus AHT
1]
gi|225168944|gb|EEG77744.1| uroporphyrin-III C-methyltransferase [Dethiobacter alkaliphilus AHT
1]
Length = 504
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 68/249 (27%), Gaps = 22/249 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+V+TR ++A +I++MG P H + + +Y + TS
Sbjct: 257 RVVVTRSREQASDLSRRIEEMGGEAWEFPAIEIDHPEDYGPMDEAINQLDTYNWLIFTSV 316
Query: 58 ESLSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I AIG + F + +I
Sbjct: 317 NGVDFFNRLRHHERDIRDLKGAKICAIGPKTKERLEDMCLNVDFVPSEYVA--EAVIDVL 374
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI-PLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ P ++ D L + + + Y + T +K LL+
Sbjct: 375 RGKLLPGDKVLMPRADIARAILPDTLRDEMQADVTNVVAYRTVRGGGDATLLKELLEEKM 434
Query: 169 AI--LFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
F + S+V F + + + + + + + A
Sbjct: 435 IHYVTFTSSSTVKNFVEILNADNLHDLLKDVKLVSIGPITSQSAKDLGLKIDIEADEYTI 494
Query: 222 TSLLKLLPL 230
L++ L
Sbjct: 495 DGLVEALKK 503
>gi|269128633|ref|YP_003302003.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Thermomonospora curvata DSM 43183]
gi|268313591|gb|ACY99965.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Thermomonospora curvata DSM 43183]
Length = 526
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 75/247 (30%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A E+++ G +P +P R + Y + T
Sbjct: 249 RVLVPRTKEQAASLSERLRSYGAVPEEVPTISVEPPRTPQQMDRAVKGLVTGRYEWVVFT 308
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHG--KDNSINLAK 104
S+ ++ + F + + A+GE +A + G T + + L +
Sbjct: 309 STNAVRAIKEKFDDYGLDARAFAGLKVAAVGEQTAKALMEFGVTPDLVPTGQQSGEGLVE 368
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + Y + A P ++ +
Sbjct: 369 VWPPYDKDLDPINRVLLPRADIATDTLIAGLTELGWECDDVTAYRTVRAAPPPAPIREAI 428
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + + A V +A P
Sbjct: 429 KGGGFDAVLFTSSSTVRNLIGIAGKPHNVTVIAVIGPQTAKTAQEYGLRVDVMAAKPSAL 488
Query: 223 SLLKLLP 229
L L
Sbjct: 489 ELADALA 495
>gi|332978075|gb|EGK14813.1| uroporphyrinogen-III synthase [Desmospora sp. 8437]
Length = 500
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 74/249 (29%), Gaps = 24/249 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR + EKI+++G V P F R L +++ + TS
Sbjct: 242 RILLTRAKGQNQSMAEKIRRLGGEAVEFPAIEFRPPRHQEVLDQALRRLEAFDWVVFTSV 301
Query: 58 ESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ + + A+G +A +KG + +I
Sbjct: 302 NGVNFFFRHLNRLNIDIRQMHRARLAAVGPRTAQALEEKGLRVEILPEAYQA--ENLIEA 359
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
K +P + ++ L + +D Y + + +L+
Sbjct: 360 LKPHVSPGETVLLPRANIARKLLATELTACGCQVTDVDVYDTVPGVQGIGEVVGMLKRGE 419
Query: 168 -DAILFYARSSVLYFFSLPLPAKISAA-------FLCLSNNIASAIPASYKNVVTVACFP 219
+ F + S+V F + +C+ A V VA
Sbjct: 420 LHFLTFTSSSTVRNFVKELRRVESGWKSLLDGVRVVCIGPITAQTAEQYGVQVDAVAGIY 479
Query: 220 KETSLLKLL 228
L++ +
Sbjct: 480 TVDGLIEAM 488
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 39/134 (29%), Gaps = 8/134 (5%)
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMK 161
+ + + + ++ K +N + + + + E
Sbjct: 228 EELAWLERKPLFGRRILLTRAKGQNQSMAEKIRRLGGEAVEFPAIEFRPPRHQEVLDQAL 287
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTV 215
L+ D ++F + + V +FF I + A A+ V +
Sbjct: 288 RRLEAFDWVVFTSVNGVNFFFRHLNRLNIDIRQMHRARLAAVGPRTAQALEEKGLRVEIL 347
Query: 216 ACFPKETSLLKLLP 229
+ +L++ L
Sbjct: 348 PEAYQAENLIEALK 361
>gi|297201479|ref|ZP_06918876.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sviceus ATCC 29083]
gi|197716810|gb|EDY60844.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sviceus ATCC 29083]
Length = 567
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 23/254 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 288 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 347
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 348 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTANALIAFGVKPDLVPSGEQSAAGLLE 407
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 408 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 467
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V +A P
Sbjct: 468 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMAPEPSVH 527
Query: 223 SLLKLLP----LRR 232
L + L RR
Sbjct: 528 KLAEALADFGLRRR 541
>gi|23507699|gb|AAN38292.1| uroporphobilinogen-III synthase [Corynebacterium glutamicum]
Length = 590
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y + +T
Sbjct: 318 RVLVPRAREQAASMSARLSSHGAIPQEVPTISVEPPRNPAQMERAIKGIVEGRYQWVVLT 377
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHG---KDNSINLA 103
S ++ + I A+GE +A R G T + N+ L
Sbjct: 378 SVNAVKAVWEKITEFGLDSRSFAGVRIAAVGEKTAAEIRALGITPELLPARTRQNAQGLV 437
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ E P ++ D L + + Y + A P ++++
Sbjct: 438 DVFPEYFEELDPVGRVLLPRADIATDVLVDGLTHLGWEVEDVVAYRTVRAAPPSADIRDM 497
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ A+ V + +
Sbjct: 498 IKTGGFDAVAFTSSSTVKNLVGIAGKPHPRTIVACIGPMTAATAEELGLRVDVMPEIAEV 557
Query: 222 TSLLKLLPLR 231
L+ L
Sbjct: 558 PELIDALAEH 567
>gi|21221748|ref|NP_627527.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces coelicolor A3(2)]
gi|256787076|ref|ZP_05525507.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces lividans TK24]
gi|289770974|ref|ZP_06530352.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces lividans TK24]
gi|5123662|emb|CAB45351.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Streptomyces coelicolor A3(2)]
gi|289701173|gb|EFD68602.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces lividans TK24]
Length = 565
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 23/254 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 285 KVLVPRTKEQAASLSDQLRSYGAVPSEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 344
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 345 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTANALIAFGVKPDLVPSGEQSAAGLLE 404
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P T + +
Sbjct: 405 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPATTREAI 464
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P T
Sbjct: 465 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMSPEPSVT 524
Query: 223 SLLKLLP----LRR 232
L + L RR
Sbjct: 525 KLAEALADFGLRRR 538
>gi|21323194|dbj|BAB97822.1| Uroporphyrinogen-III synthase [Corynebacterium glutamicum ATCC
13032]
Length = 590
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y + +T
Sbjct: 318 RVLVPRAREQAASMSARLSSHGAIPQEVPTISVEPPRNPAQMERAIKGIVEGRYQWVVLT 377
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHG---KDNSINLA 103
S ++ + I A+GE +A R G T + N+ L
Sbjct: 378 SVNAVKAVWEKITEFGLDSRSFAGVRIAAVGEKTAAEIRALGITPELLPARTRQNAQGLV 437
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ E P ++ D L + + Y + A P ++++
Sbjct: 438 DVFPEYFEELDPVGRVLLPRADIATDVLVDGLTHLGWEVEDVVAYRTVRAAPPSADIRDM 497
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ A+ V + +
Sbjct: 498 IKTGGFDAVAFTSSSTVKNLVGIAGKPHPRTIVACIGPMTAATAEELGLRVDVMPEIAEV 557
Query: 222 TSLLKLLPLR 231
L+ L
Sbjct: 558 PELIDALAEH 567
>gi|319949782|ref|ZP_08023806.1| uroporphyrin-III C-methyltransferase HemD [Dietzia cinnamea P4]
gi|319436541|gb|EFV91637.1| uroporphyrin-III C-methyltransferase HemD [Dietzia cinnamea P4]
Length = 537
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 73/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++ E+I + G +PV +P R + Y + T
Sbjct: 279 NVLVPRTKAQSAEMSERIAEHGAVPVEVPTIAVEPPRSPAQMERAVKGLVDGRYQWVVFT 338
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AK 104
SS ++ + F I +GE +A R+ G +L +
Sbjct: 339 SSNAVRAVWEKFVEFGLDARAFSGVKIACVGEGTAARVRELGIQPELLPSGEQSSLGLLE 398
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ + P ++ + L + + Y + A P ++ ++
Sbjct: 399 VFPPYDDVLDPVNRVLLPRADIATETLAEGLTARGWEIEDVTAYRTVRAAPPAAEIREMI 458
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ A V
Sbjct: 459 KTGGFDAVCFTSSSTVRNLVGIAGKPHARTLIACIGPRTAETAAEFGLRVDVQPENASVL 518
Query: 223 SLLKLLP 229
L+ L
Sbjct: 519 ELVDALA 525
>gi|317123820|ref|YP_004097932.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Intrasporangium calvum DSM 43043]
gi|315587908|gb|ADU47205.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Intrasporangium calvum DSM 43043]
Length = 548
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 77/247 (31%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +A +++ G + ++P R + Y I T
Sbjct: 270 KVLVPRTQAQAGSMIDRLAAYGAVADVVPTISVEPPRTPQQMEKAVRGLVTGRYEWIGFT 329
Query: 56 SSESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ L A + A+G +A R+ G L +
Sbjct: 330 STNAVRAVRERFEELGLDARAFAGLKVAAVGGVTADALREWGINPDLVPSGEQSAAGLLE 389
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ E + P ++ L + + + Y + A P +++ +
Sbjct: 390 VWPEFDEVLDPINRVLLPRADIATETLVAGLRDIGWEVDDVTAYRTVRAAPPAQHVRDAI 449
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ + DA+LF + S+V + + C+ A V +A
Sbjct: 450 KGGDYDAVLFTSSSTVRNLVGIAGKPHPATVVACIGPATAKTAEEHGLRVDVLAPEASAL 509
Query: 223 SLLKLLP 229
SL+ L
Sbjct: 510 SLVDALA 516
>gi|197287144|ref|YP_002153016.1| uroporphyrinogen-III synthase [Proteus mirabilis HI4320]
gi|194684631|emb|CAR46537.1| uroporphyrinogen-III synthase [Proteus mirabilis HI4320]
Length = 245
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 69/244 (28%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP + +++ G PL +E L + + + S
Sbjct: 1 MSILITRPSPAGEQLTQRLIDAGKHAFHAPLIEIAAGKELSILENKLNKLSTGDYLFLLS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ T + S Q+ + ++
Sbjct: 61 KNAVWYANWQLNQLQQSWPDTLFYYGIGQSTAEEFQQLTGHSIRYPEFGETSEDLLALSS 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K ++ L G L + + +CY I Y +NA
Sbjct: 121 LQQIENKRVLLLRGNGGRELLATTLRQRGAIVDECECYQRLFIDYVSEEFALKWKNAQVD 180
Query: 170 -ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + + F L +++ + +S +A+ +TVA +L
Sbjct: 181 TFVVTSGEMLQQLFYLVAGSEKAWLLNSHLVVVSKRLATIASTLGFKKITVAESANNDAL 240
Query: 225 LKLL 228
L
Sbjct: 241 FHAL 244
>gi|29831284|ref|NP_825918.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces avermitilis MA-4680]
gi|29608399|dbj|BAC72453.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Streptomyces avermitilis MA-4680]
Length = 571
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 23/254 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 292 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 351
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 352 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAKALVAFGVKPDLVPSGEQSAAGLLE 411
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 412 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 471
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V +A P
Sbjct: 472 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMAPEPSVL 531
Query: 223 SLLKLLP----LRR 232
L + L RR
Sbjct: 532 KLAEALADFGLRRR 545
>gi|297617595|ref|YP_003702754.1| uroporphyrin-III C-methyltransferase [Syntrophothermus lipocalidus
DSM 12680]
gi|297145432|gb|ADI02189.1| uroporphyrin-III C-methyltransferase [Syntrophothermus lipocalidus
DSM 12680]
Length = 507
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 82/246 (33%), Gaps = 21/246 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
IV+TR ++A R I+ +G V +P + L + +Y + TS
Sbjct: 257 RIVVTRSREQASRLSSMIEALGGHVVEIPTIKITPSADMSPLYRCFDVINTYHWLIFTSV 316
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + I AIG A+A ++KG ++ I+ +
Sbjct: 317 NGVQIFFDEMLKCGKDIRDLKGLHIAAIGPATAQALKEKGLVVDVVPEEFRA--EGIVRD 374
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
K P ++ + + L + + + Y + ++ LL
Sbjct: 375 MKGRIRPGSKVLLPRARGARDVLPEVLRDWGAEVTEVHLYQALTEKVAPEHLEALLTGHV 434
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
DAI F + S+V F + I A +C+ A+ V VA
Sbjct: 435 DAITFTSSSTVKNFVKILGDKNIEEVTQTARVVCIGPVTAATAQEMGMRVDKVASEYTVP 494
Query: 223 SLLKLL 228
L++ L
Sbjct: 495 GLVQAL 500
>gi|329936059|ref|ZP_08285859.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces griseoaurantiacus M045]
gi|329304537|gb|EGG48415.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces griseoaurantiacus M045]
Length = 572
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 76/254 (29%), Gaps = 23/254 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 290 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 349
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 350 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAQALIAFGVKPDLVPSGEQSAAGLLE 409
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 410 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 469
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 470 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMSPEPSVQ 529
Query: 223 SLLKLL----PLRR 232
L + L RR
Sbjct: 530 KLAEALADFGARRR 543
>gi|296118430|ref|ZP_06837009.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Corynebacterium ammoniagenes DSM 20306]
gi|295968571|gb|EFG81817.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Corynebacterium ammoniagenes DSM 20306]
Length = 574
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 77/248 (31%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ RP +A ++ G IP +P R + Y I T
Sbjct: 297 RVLVPRPKAQAAPMSARLASYGAIPQSVPTISVEPPRNPTQMDRAIKGIVEGRYKWIVFT 356
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN---LA 103
S +++ + + A+GE +A RQKG T K N N L
Sbjct: 357 SVNAVTAVWDKIADLGLDARDFAGVNLAAVGEKTAEAIRQKGMTPEVLPKPNRQNAEGLV 416
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ ++ L + + Y + A P ++++
Sbjct: 417 DVFPNFVEDIDAVGRVLLPRADIAGEALVTGLEALGWEVDDVVAYRTVRAAPPSAEVRDM 476
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+++ DA+ F + S+V + C+ + +A V V
Sbjct: 477 IKSGGFDAVAFTSGSTVRNLVGIAGKPHQRTIIACIGPSTKAAAEEMGLRVDVVPEVADV 536
Query: 222 TSLLKLLP 229
SL+ L
Sbjct: 537 PSLVDALA 544
>gi|171914696|ref|ZP_02930166.1| uroporphyrin-III C-methyltransferase [Verrucomicrobium spinosum DSM
4136]
Length = 508
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 33/243 (13%), Positives = 74/243 (30%), Gaps = 16/243 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSS 57
IV+TR ++A +++ +G + +P ++ +Y I TS
Sbjct: 263 RIVVTRTRQQAGGLTKQLSLLGASVLEIPTIKIEPPQDLKAFGQLVMDSHTYEWIIFTSP 322
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ F + I AIG +A + + +I
Sbjct: 323 NGVDRFFEMFYKLYDDARSIGAAKIAAIGPGTAERVKAYHLAVDLMPEKFVA--EGLIKA 380
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
K + ++++ + + L+ L Y + ++ +
Sbjct: 381 FKDQSVENQTVLWVKAESTREILGNELVGMGAILDEAIAYRTVPEDADHESITQFKEEGA 440
Query: 168 DAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
D I F + S+V +F L +P + + + + + A L+K
Sbjct: 441 DVITFTSSSTVEHFLELKVPLPEGIKVASIGPITSDTLRKNGMRIDIEAKEHSIPGLVKA 500
Query: 228 LPL 230
+
Sbjct: 501 IEK 503
>gi|253690342|ref|YP_003019532.1| Uroporphyrinogen-III synthase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756920|gb|ACT14996.1| Uroporphyrinogen-III synthase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 246
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++K+GY PL F RE L ++ + S
Sbjct: 1 MTILVTRPSPTGEQLVTRLRKLGYNAWHSPLIEFSPGRELASLPALLQTLRADDLVFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + LA K ++ +
Sbjct: 61 QHAIHYADPMLARAGIGWPAHLAYYAIGRTTALALHKTSAHPVIYPPERETSETLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G + L E + + +CY +D+ Y Q
Sbjct: 121 LQNISGKRALLLRGNGGRELLGETLTERGVQVTYCECYQRRDVHYDGPEQSRHWQQIGID 180
Query: 170 -ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S +A + VA +
Sbjct: 181 KLVITSGEMLQRIYTLVPDYYRASWLLGCRLIVVSERLAEQARQLGWRDIRVADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LVRALQ 246
>gi|145294548|ref|YP_001137369.1| hypothetical protein cgR_0499 [Corynebacterium glutamicum R]
gi|140844468|dbj|BAF53467.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 598
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y + +T
Sbjct: 326 RVLVPRAREQAASMSARLSSHGAIPQEVPTISVEPPRNPAQMERAIKGIVEGRYQWVVLT 385
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHG---KDNSINLA 103
S ++ + I A+GE +A R G T + N+ L
Sbjct: 386 SVNAVKAVWEKITEFGLDSRSFAGVRIAAVGEKTAAEIRALGITPELLPARTRQNAQGLV 445
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ E P ++ D L + + Y + A P ++++
Sbjct: 446 DVFPEYFEELDPVGRVLLPRADIATDVLVDGLTHLGWEVEDVVAYRTVRAAPPSADIRDM 505
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ A+ V + +
Sbjct: 506 IKTGGFDAVAFTSSSTVKNLVGIAGKPHPRTIVACIGPMTAATAEELGLRVDVMPEIAEV 565
Query: 222 TSLLKLLPLR 231
L+ L
Sbjct: 566 PELIDALAEH 575
>gi|317507245|ref|ZP_07964992.1| uroporphyrinogen-III synthase HemD [Segniliparus rugosus ATCC
BAA-974]
gi|316254459|gb|EFV13782.1| uroporphyrinogen-III synthase HemD [Segniliparus rugosus ATCC
BAA-974]
Length = 306
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 73/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G IPV +P R + Y + TS
Sbjct: 38 VLVPRTKDQAGEMCERLVSHGAIPVEVPTIAVEPARSPAQMERAVKGLVDGRYQWVVFTS 97
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +G A+A R+ G + +L +
Sbjct: 98 TNAVRAVWEKFNEFGLDARAFSGVKIACVGPATAKRVREFGIEPELVPEGEQSSLGLLEE 157
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ L + + + Y + A P ++ +++
Sbjct: 158 FPPYDEIFDPVNRVLLPRADIATETLAAGLRDGGWEVDDVTAYRTVRAAPPPADIREMIK 217
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ V +
Sbjct: 218 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTVETAQEFGLRVDVQPDVASAPA 277
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 278 LVDALAEH 285
>gi|325001830|ref|ZP_08122942.1| uroporphyrin-III C-methyltransferase HemD [Pseudonocardia sp. P1]
Length = 500
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 72/251 (28%), Gaps = 23/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
+++ R +A E+++ G IP +P R + Y + T
Sbjct: 227 RVLVPRTKDQAGVMSERLRMHGAIPEEVPTIAVEPPRSPAQMERSVKGLVDGRYQWVVFT 286
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN----- 101
S+ ++ + F I +G ++A R+ G +
Sbjct: 287 STNAVKAVWEKFHEFGLDARAFSGVKIACVGRSTAEKVREFGIEPELVPDIDEAQSSTSE 346
Query: 102 -LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
L I + P ++ L E + + Y + A P +
Sbjct: 347 GLLDIFPPHDDVLDPVDRVLLPRADIATETLSAGLQERGWEVDDVTAYRTVRAAPPPAPI 406
Query: 161 KNLLQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
+ ++ DA+ F + S+V + C+ A V
Sbjct: 407 REAIKTGGFDAVCFTSSSTVRNLVGIAGKPHARTLVACIGPATAETAREFGLRVDVQPEE 466
Query: 219 PKETSLLKLLP 229
+ +L+ L
Sbjct: 467 SRVPTLVDALA 477
>gi|262201011|ref|YP_003272219.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Gordonia bronchialis DSM 43247]
gi|262084358|gb|ACY20326.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Gordonia bronchialis DSM 43247]
Length = 577
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 70/248 (28%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +P +P R + Y + TS
Sbjct: 308 VLVPRTKDQAADMSERLVSHGAVPKEVPTIAVEPPRSPAQMERAVKGLVDGRYQWVVFTS 367
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GEA+A R G +L
Sbjct: 368 TNAVRAVWEKFAEFGLDARAFSGVKIACVGEATAERVRSFGINPELIPSGEQSSLGLLDE 427
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 428 FPPYDDVFDPVNRILLPRADIATETLSEGLRERGWEIDDVTAYRTVRAAPPPAATREMIK 487
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 488 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETATEFGLRVDVQPETASIPD 547
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 548 LVDALAEH 555
Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
I++ R E +++ G+ + + + + + A+ TSS
Sbjct: 440 RILLPRADIATETLSEGLRERGWEIDDVTAYRTVRAAPPPAATREMIKTGGFDAVCFTSS 499
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVLF 113
++ L + + IG +A A + G + + +L + E
Sbjct: 500 STVRNLVGIAGKPHARTIVACIGPKTAETATEFGLRVDVQPETASIPDLVDALAEHAARL 559
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 560 RAEGALPPPRKKSRR 574
>gi|227357163|ref|ZP_03841532.1| uroporphyrinogen-III synthase [Proteus mirabilis ATCC 29906]
gi|227162695|gb|EEI47662.1| uroporphyrinogen-III synthase [Proteus mirabilis ATCC 29906]
Length = 245
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 68/244 (27%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP + +++ G PL +E L + + + S
Sbjct: 1 MSILITRPSPAGEQLTQRLIDAGKHAFHAPLIEIAAGKELSILENKLNKLSTGDYLFLLS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ T + S Q+ + ++
Sbjct: 61 KNAVWYANWQLNQLQQSWPDTLFYYGIGQSTAEEFQQLTGHSIRYPEFGETSEDLLALSS 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K ++ L G L + + +CY I Y +NA
Sbjct: 121 LQQIENKRVLLLRGNGGRELLATTLRQRGAIVDECECYQRLFIDYVSEEFALKWKNAQVD 180
Query: 170 -ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + + F L + + + +S +A+ +TVA +L
Sbjct: 181 TFVVTSGEMLQQLFYLVAGSEKAWLLDSHLVVVSKRLATIASTLGFKKITVAESANNDAL 240
Query: 225 LKLL 228
L
Sbjct: 241 FHAL 244
>gi|19551674|ref|NP_599676.1| uroporphyrinogen-III synthase/methylase [Corynebacterium glutamicum
ATCC 13032]
gi|62389329|ref|YP_224731.1| uroporphyrinogen III synthase/methyltransferase [Corynebacterium
glutamicum ATCC 13032]
gi|41324663|emb|CAF19145.1| UROPORPHYRINOGEN III SYNTHASE/METHYLTRANSFERASE [Corynebacterium
glutamicum ATCC 13032]
Length = 598
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y + +T
Sbjct: 326 RVLVPRAREQAASMSARLSSHGAIPQEVPTISVEPPRNPAQMERAIKGIVEGRYQWVVLT 385
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHG---KDNSINLA 103
S ++ + I A+GE +A R G T + N+ L
Sbjct: 386 SVNAVKAVWEKITEFGLDSRSFAGVRIAAVGEKTAAEIRALGITPELLPARTRQNAQGLV 445
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ E P ++ D L + + Y + A P ++++
Sbjct: 446 DVFPEYFEELDPVGRVLLPRADIATDVLVDGLTHLGWEVEDVVAYRTVRAAPPSADIRDM 505
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ A+ V + +
Sbjct: 506 IKTGGFDAVAFTSSSTVKNLVGIAGKPHPRTIVACIGPMTAATAEELGLRVDVMPEIAEV 565
Query: 222 TSLLKLLPLR 231
L+ L
Sbjct: 566 PELIDALAEH 575
>gi|218887853|ref|YP_002437174.1| uroporphyrin-III C-methyltransferase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758807|gb|ACL09706.1| uroporphyrin-III C-methyltransferase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 503
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 39/248 (15%), Positives = 73/248 (29%), Gaps = 21/248 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR ++A E ++++G V P I + + Y + TS
Sbjct: 254 VVVTRAREQASGLAEALRELGADVVQFPTIEIIPLADYAPVDAAIRDLPGYDWVVFTSVN 313
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + AIG A+A + R KG F + ++
Sbjct: 314 GVKHFWNRLAACGQDSRALAGRKVAAIGPATADVLRTKGIEPDFIPEKYVA--EGVVEGM 371
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
K ++ + D L + + V+ Y + + + +Q
Sbjct: 372 LARGMGGKRVLLPRAREAREVLPDELRKAGAVVDVLPVYETVPSTARKDDVLARMQEGRI 431
Query: 170 IL--FYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F + S+V FFSL A C+ + +
Sbjct: 432 HCVTFGSSSTVDNFFSLVPVDMVKAHPEVKLACIGPVTRKTLEGYGLTCHIQPEDFTIPA 491
Query: 224 LLKLLPLR 231
L+ L R
Sbjct: 492 LVDELVAR 499
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 11/108 (10%), Positives = 33/108 (30%), Gaps = 11/108 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSS 57
+++ R + ++++K G + ++P+ + + + + + SS
Sbjct: 380 RVLLPRAREAREVLPDELRKAGAVVDVLPVYETVPSTARKDDVLARMQEGRIHCVTFGSS 439
Query: 58 ESLSTL-------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDN 98
++ + IG + G T +D
Sbjct: 440 STVDNFFSLVPVDMVKAHPEVKLACIGPVTRKTLEGYGLTCHIQPEDF 487
>gi|258591838|emb|CBE68141.1| Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase
[NC10 bacterium 'Dutch sediment']
Length = 509
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 67/245 (27%), Gaps = 18/245 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR ++A R E ++ G V +PL + + ++Y + TS+
Sbjct: 255 RILVTRTREQAGRFAELLEGQGAEVVGVPLIEIAPPKSWQPVDQAIERLETYRWVIFTSA 314
Query: 58 ESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ SA +G I II K
Sbjct: 315 NGVEAFFHRLRELRQDARRLGAARICAIGSATADTLEGHNIIPDVVPVEFRAEGIIEALK 374
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ ++ + L + + V+ Y + +K++L +
Sbjct: 375 PYDLRGEKILLPRAEVARDLLPKELEQRGATVEVVPVYRTVKSTSSVELLKSILTDRKID 434
Query: 170 -ILFYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V F + C+ + V S
Sbjct: 435 LVTFTSSSTVTNFVEALTQEDLKALCEGVRVGCIGPITKETAERFGLPIDIVPERYTIPS 494
Query: 224 LLKLL 228
+ +
Sbjct: 495 FVDAI 499
>gi|253575682|ref|ZP_04853018.1| uroporphyrinogen-III methyltransferase/uroporphyrinogen-III
synthase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845020|gb|EES73032.1| uroporphyrinogen-III methyltransferase/uroporphyrinogen-III
synthase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 515
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 72/252 (28%), Gaps = 27/252 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYF------IHDRESVFLAMQQSYGAIAIT 55
I++TR +A I+++G P P+ L + Y + T
Sbjct: 255 RILVTRSRSQASELVRGIEELGGEPYEFPVIDIAMPEGQELASTDEALNQLEQYDWVFFT 314
Query: 56 SSESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S + ++ R I A+G A+ RQ+G ++
Sbjct: 315 SVNGVEYFFSHLERLGKDVRGLHKARIAAVGPATQAALRQRGIAAEGLPGKFQA--EGLM 372
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
P + ++ G L E + + Y + + + LL+
Sbjct: 373 ETYGSELKPGQHVLLPRGDLARAWLPAALREQGLTVTEAVMYRTVPAGETDEELLKLLEK 432
Query: 167 ADAI--LFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVA 216
F + S+V + A C+ A + V +A
Sbjct: 433 GRIHAVTFTSSSTVTNLLAALTGMGVADPVAALQGVDIACIGPVTAKTAEDAGLRVSILA 492
Query: 217 CFPKETSLLKLL 228
SL++ L
Sbjct: 493 EEATIDSLIQAL 504
>gi|269837830|ref|YP_003320058.1| uroporphyrinogen-III synthase [Sphaerobacter thermophilus DSM
20745]
gi|269787093|gb|ACZ39236.1| Uroporphyrinogen-III synthase [Sphaerobacter thermophilus DSM
20745]
Length = 268
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 64/241 (26%), Gaps = 14/241 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TR +A +++ G PV + + + + L Y + TSS
Sbjct: 19 RVLVTRAAGQAGDLSARLRAAGAEPVEVAVIQIVPPDDVAPLDDALRRLPEYDWVLFTSS 78
Query: 58 ESLSTLPANF-------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + A +A R + + ++
Sbjct: 79 NTVEAVFARLDALGLDARAFEATRVAAIGTATAERLRARGVRVDYVPDRFVAEALLEGLI 138
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ ++ + + L + V+ Y ++ D +
Sbjct: 139 TRGVAGQRVLLPRAEHARDVLPNGLRSVGATVDVVVAYRTEIPPDAPGLRALEAGEIDVV 198
Query: 171 LFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ S+ +L A C+ A+ V VA L+
Sbjct: 199 TLTSSSTARNLVALASGRVDLINRARVACIGPITAATAREVGLRVDLVAEEHTIPGLVAA 258
Query: 228 L 228
L
Sbjct: 259 L 259
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 29/122 (23%), Gaps = 8/122 (6%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILFYAR 175
++ + L + L D +LF +
Sbjct: 19 RVLVTRAAGQAGDLSARLRAAGAEPVEVAVIQIVPPDDVAPLDDALRRLPEYDWVLFTSS 78
Query: 176 SSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
++V F+ + + A + A V V +LL+ L
Sbjct: 79 NTVEAVFARLDALGLDARAFEATRVAAIGTATAERLRARGVRVDYVPDRFVAEALLEGLI 138
Query: 230 LR 231
R
Sbjct: 139 TR 140
>gi|302559227|ref|ZP_07311569.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces griseoflavus Tu4000]
gi|302476845|gb|EFL39938.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces griseoflavus Tu4000]
Length = 565
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 23/254 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 285 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 344
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 345 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTANALIAFGVKPDLVPSGEQSAAGLLE 404
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 405 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 464
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V +A P
Sbjct: 465 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMAPEPSVH 524
Query: 223 SLLKLLP----LRR 232
L + L RR
Sbjct: 525 KLAEALADFGTRRR 538
>gi|212703992|ref|ZP_03312120.1| hypothetical protein DESPIG_02045 [Desulfovibrio piger ATCC 29098]
gi|212672585|gb|EEB33068.1| hypothetical protein DESPIG_02045 [Desulfovibrio piger ATCC 29098]
Length = 505
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 74/246 (30%), Gaps = 20/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
IV+TR ++A + + ++G + P + +A YG I TS
Sbjct: 254 IVVTRAREQASGLAQSLTELGANVIQCPTIEISPLADYSELDAAVARLAEYGWIIFTSVN 313
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + AIG A+A R++G F +
Sbjct: 314 GVRHFWKRLAACGRDSRAIGQCKVAAIGPATADALRERGIEPDFIPARYVAEGVVEGLLA 373
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-- 167
+ K L D L + + VI Y + A + + +Q+
Sbjct: 374 MGPVSGVKML-LPRAAKAREVLPDELRKAGAQVDVIAAYETVPAAARKDEVLAAMQDGTL 432
Query: 168 DAILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D + F + S+V F SL ++ + A + +
Sbjct: 433 DCVTFGSSSTVENFLSLIPAEELRAHPEVKLAAIGPVTAKTLADHGLPCHIQPEAYTIPA 492
Query: 224 LLKLLP 229
L++ L
Sbjct: 493 LVEALK 498
>gi|227325803|ref|ZP_03829827.1| uroporphyrinogen-III synthase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 246
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 70/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++K+GY PL F RE L + S
Sbjct: 1 MTILVTRPSPTGEQLVTRLRKLGYNAWHSPLIEFSPGRELASLPTLLQALHPDDLVFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + LA K ++
Sbjct: 61 QHAIHYADPMLARTGISWPVHLAYYAIGRTTALALHKISAHPVTYPPERETSETLLQLPD 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G + L E + +CY +D+ Y Q
Sbjct: 121 LQDVSGKRALLLRGNGGRELLGETLTERGAQVTYCECYQRRDVHYDGLEQSRHWQQIGID 180
Query: 170 -ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S +A + VA +
Sbjct: 181 KLVITSGEMLQRIYTLVPDYYRASWLLGCQLIVVSERLAEQARQLGWRDIRVADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LVRALQ 246
>gi|322834935|ref|YP_004214962.1| Uroporphyrinogen III synthase HEM4 [Rahnella sp. Y9602]
gi|321170136|gb|ADW75835.1| Uroporphyrinogen III synthase HEM4 [Rahnella sp. Y9602]
Length = 249
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 74/247 (29%), Gaps = 17/247 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP +++ +G + PL F + L + + S
Sbjct: 1 MTILVTRPSPAGEALVSRLRALGRVAFHSPLIDFAPGNQLASLPNLLSSLNQQDLVFVLS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFH------GKDNSINLAKIIVEQK 110
++S + T + + R G + ++
Sbjct: 61 QHAVSYADRALRQSTTNWPDTVNYFAIGRTTGLIFHRVSSLPVLYPQDGETSETLLNLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L E + + +CY + Y E + D
Sbjct: 121 LQRIQGKKALILRGNGGRELLAETLTERGVDVTYCECYQRSPVYYDASEQSALWQRAGVD 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + + L + + +S +A+ + + VA +
Sbjct: 181 TLVVTSGEMLQQLYQLVPDYYRNSWLLRCNLVVVSERLAALARQLGWSAIRVAENADNDA 240
Query: 224 LLKLLPL 230
L++ L L
Sbjct: 241 LIRALQL 247
>gi|227114731|ref|ZP_03828387.1| uroporphyrinogen-III synthase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 246
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 71/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++K+GY PL F RE L + + S
Sbjct: 1 MTILVTRPSPTGEQLVTRLRKLGYNAWHSPLIEFSPGRELASLPALLQALSADDLVFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + LA K ++
Sbjct: 61 QHAIHYADPMLVRTGISWPAHLAYYAIGRTTALALHKISAHPVTYPPERETSETLLQLPD 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G + L E + +CY +D+ Y Q
Sbjct: 121 LQDVSGKRALLLRGNGGRELLGETLTERGAQVTYCECYQRRDVHYDGLEQSRHWQQIGID 180
Query: 170 -ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S +A + VA +
Sbjct: 181 KLVITSGEMLQRIYTLVPDYYRASWLLGCWLIVVSERLAEQARQLGWRDIRVADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LVRALQ 246
>gi|323964048|gb|EGB59538.1| uroporphyrinogen-III synthase HemD [Escherichia coli M863]
gi|327250653|gb|EGE62359.1| uroporphyrinogen-III synthase [Escherichia coli STEC_7v]
Length = 246
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFTLS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPQLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|260596028|ref|YP_003208599.1| uroporphyrinogen-III synthase [Cronobacter turicensis z3032]
gi|260215205|emb|CBA27055.1| Uroporphyrinogen-III synthase [Cronobacter turicensis z3032]
Length = 246
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 73/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G PL F RE L + S
Sbjct: 1 MTILVTRPSPAGEELVSRLRALGQEAWSFPLIEFCPGRELAQLPALLDALAPDDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++S A+ R F + LA + H + ++ +
Sbjct: 61 QHAVSFANAHLQRLGRRFPRTVEAFAIGRTTALALHQVSGLHVHYPRDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L E + +CY Y + + +
Sbjct: 121 LQNVAGKRALILRGNGGRELLGETLTERGAAVTFCECYQRSAKIYDGPQEAHRWHTRGIT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + L P + + +S +A+ + VA +
Sbjct: 181 TLVVTSGEMLRQLHDLVPPWYRANWLLRCRLVVVSERLATLARELGWQNILVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|291303142|ref|YP_003514420.1| Uroporphyrinogen III synthase HEM4 [Stackebrandtia nassauensis DSM
44728]
gi|290572362|gb|ADD45327.1| Uroporphyrinogen III synthase HEM4 [Stackebrandtia nassauensis DSM
44728]
Length = 527
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 78/247 (31%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
++I R ++A +K+++ G IP +P R + Y I T
Sbjct: 248 KVLIPRTKEQAGEMSDKLREYGAIPCEVPTIAVEPPRTPAQMERAIKGLVDGRYAWIVFT 307
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + F H I +G+A+A R G L +
Sbjct: 308 SANAVKAIWEKFAEHGLDARAFGGLKIACVGDATAAKVRSFGIEPELLPTGEQSGTGLLE 367
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ + P ++ L E + + Y + + P +++ +
Sbjct: 368 VFPPHDTILDPVSRVLLPRADIATEALSAGLQERGWEVDDVTAYRTVRASPPPADIRDAI 427
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+LF + S+V + + + A V
Sbjct: 428 KSGGFDAVLFTSSSTVRNLVGIAGKPHARTVVSVIGPHTAETATEFGLRVDAQPQHANMP 487
Query: 223 SLLKLLP 229
SL++ L
Sbjct: 488 SLVEALA 494
>gi|291452104|ref|ZP_06591494.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces albus J1074]
gi|291355053|gb|EFE81955.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces albus J1074]
Length = 554
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 272 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 331
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 332 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALIAFGVKPDLVPSGEQSAAGLLE 391
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 392 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPADTREAI 451
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V +A P
Sbjct: 452 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTIIACIGPATAKTAEEHGLRVDVMAPEPSVH 511
Query: 223 SLLKLLP 229
L + L
Sbjct: 512 KLAEALA 518
>gi|239980249|ref|ZP_04702773.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Streptomyces albus J1074]
Length = 545
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 263 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 322
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 323 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALIAFGVKPDLVPSGEQSAAGLLE 382
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 383 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPADTREAI 442
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V +A P
Sbjct: 443 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTIIACIGPATAKTAEEHGLRVDVMAPEPSVH 502
Query: 223 SLLKLLP 229
L + L
Sbjct: 503 KLAEALA 509
>gi|239909042|ref|YP_002955784.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
family protein [Desulfovibrio magneticus RS-1]
gi|239798909|dbj|BAH77898.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
family protein [Desulfovibrio magneticus RS-1]
Length = 514
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 71/250 (28%), Gaps = 23/250 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR ++A + G P + + + TS+
Sbjct: 265 VVVTRSREQASDLTRLLGAEGACCYEFPAIEIAPLTDVAPVDAAIDSLYDNDWVVFTSAN 324
Query: 59 SLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I AIG A+A ++G F + +
Sbjct: 325 GVDCFFERIDAKGLDARAFAGIRIAAIGPATAKKLAERGLRADFIPERFVAESV--VEGL 382
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
K ++ + + L E + V+ Y ++ + + ++N +
Sbjct: 383 LAQDVAGKKVLIPRAREARDVLPEKLAEAGCTVTVLPVYDTRPVDQDPAEIIQAVKNGEI 442
Query: 170 I--LFYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
F + S+V FF+ P + C+ A+ + A +L
Sbjct: 443 HYVTFTSSSTVKNFFAQIPPEVLKASAVKTACIGPITAATLAEYGFTPDVNAAAYTVPAL 502
Query: 225 LKLL---PLR 231
+ + R
Sbjct: 503 AQAVIDDARR 512
Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 10/104 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
++I R + EK+ + G ++P+ + + TSS
Sbjct: 391 KVLIPRAREARDVLPEKLAEAGCTVTVLPVYDTRPVDQDPAEIIQAVKNGEIHYVTFTSS 450
Query: 58 ESLSTLPANFCRH------TPIFAIGEASACLARQKGFTQIFHG 95
++ A IG +A + GFT +
Sbjct: 451 STVKNFFAQIPPEVLKASAVKTACIGPITAATLAEYGFTPDVNA 494
>gi|332996996|gb|EGK16614.1| uroporphyrinogen-III synthase [Shigella flexneri VA-6]
Length = 246
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVRRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPQLPTYFTIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTVRGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|323974385|gb|EGB69513.1| uroporphyrinogen-III synthase HemD [Escherichia coli TW10509]
Length = 246
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQERKWPHLPTYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|291445602|ref|ZP_06584992.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces roseosporus NRRL 15998]
gi|291348549|gb|EFE75453.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces roseosporus NRRL 15998]
Length = 556
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 276 RVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 335
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 336 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALIDFGVKPDLVPSGEQSAAGLLE 395
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 396 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPADTREAI 455
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 456 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVH 515
Query: 223 SLLKLLP 229
L + L
Sbjct: 516 KLAEALA 522
>gi|300939978|ref|ZP_07154606.1| uroporphyrinogen-III synthase [Escherichia coli MS 21-1]
gi|300455182|gb|EFK18675.1| uroporphyrinogen-III synthase [Escherichia coli MS 21-1]
Length = 246
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILCGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|331655486|ref|ZP_08356479.1| uroporphyrinogen-III synthase [Escherichia coli M718]
gi|323173418|gb|EFZ59047.1| uroporphyrinogen-III synthase [Escherichia coli LT-68]
gi|331046807|gb|EGI18891.1| uroporphyrinogen-III synthase [Escherichia coli M718]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F + + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEA------SACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPNYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|254039016|ref|ZP_04873067.1| uroporphyrinogen-III synthase [Escherichia sp. 1_1_43]
gi|226838707|gb|EEH70735.1| uroporphyrinogen-III synthase [Escherichia sp. 1_1_43]
gi|323934192|gb|EGB30623.1| uroporphyrinogen-III synthase HemD [Escherichia coli E1520]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F + + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|46579147|ref|YP_009955.1| uroporphyrinogen III synthase/methyltransferase [Desulfovibrio
vulgaris str. Hildenborough]
gi|120603279|ref|YP_967679.1| uroporphyrin-III C-methyltransferase [Desulfovibrio vulgaris DP4]
gi|46448560|gb|AAS95214.1| uroporphyrinogen III synthase/methyltransferase [Desulfovibrio
vulgaris str. Hildenborough]
gi|120563508|gb|ABM29252.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Desulfovibrio vulgaris DP4]
gi|311232985|gb|ADP85839.1| uroporphyrin-III C-methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 503
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 70/247 (28%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSE 58
+V+TR ++A ++++G + P + + +Y + TS
Sbjct: 254 VVVTRAREQASGLAAALRELGADVIQFPTIDIHPLDDYAPVHEAIRALDTYDWVVFTSVN 313
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + AIG A+A R KG F + ++
Sbjct: 314 GVKHFWNQLAALGLDSRALGGRKVAAIGPATADALRDKGIAPDFIPEKYVA--EGVVEGM 371
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
K ++ + L + + V+ Y + A + ++
Sbjct: 372 LARGMGGKRVLLPRALEAREVLPEELRKAGATVDVLPVYVTVPSAARRDDVLARMEAGEV 431
Query: 168 DAILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V FFSL A C+ + +
Sbjct: 432 HCVTFGSSSTVENFFSLVPADTVKAHPEVKLACIGPVTKKTLEGFGFTCHIQPDDYTIPA 491
Query: 224 LLKLLPL 230
L+ L
Sbjct: 492 LVDELTR 498
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 33/108 (30%), Gaps = 11/108 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSS 57
+++ R ++ E+++K G ++P+ + + + + SS
Sbjct: 380 RVLLPRALEAREVLPEELRKAGATVDVLPVYVTVPSAARRDDVLARMEAGEVHCVTFGSS 439
Query: 58 ESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDN 98
++ + + IG + GFT D
Sbjct: 440 STVENFFSLVPADTVKAHPEVKLACIGPVTKKTLEGFGFTCHIQPDDY 487
>gi|16131656|ref|NP_418248.1| uroporphyrinogen III synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|89110216|ref|AP_003996.1| uroporphyrinogen III synthase [Escherichia coli str. K-12 substr.
W3110]
gi|170083287|ref|YP_001732607.1| uroporphyrinogen III synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|238902881|ref|YP_002928677.1| uroporphyrinogen III synthase [Escherichia coli BW2952]
gi|256026150|ref|ZP_05440015.1| uroporphyrinogen-III synthase [Escherichia sp. 4_1_40B]
gi|300921487|ref|ZP_07137835.1| uroporphyrinogen-III synthase [Escherichia coli MS 115-1]
gi|300950433|ref|ZP_07164355.1| uroporphyrinogen-III synthase [Escherichia coli MS 116-1]
gi|300955192|ref|ZP_07167589.1| uroporphyrinogen-III synthase [Escherichia coli MS 175-1]
gi|301646130|ref|ZP_07246030.1| uroporphyrinogen-III synthase [Escherichia coli MS 146-1]
gi|307140502|ref|ZP_07499858.1| uroporphyrinogen-III synthase [Escherichia coli H736]
gi|331644537|ref|ZP_08345657.1| uroporphyrinogen-III synthase [Escherichia coli H736]
gi|122848|sp|P09126|HEM4_ECOLI RecName: Full=Uroporphyrinogen-III synthase; Short=UROS; AltName:
Full=Hydroxymethylbilane hydrolyase [cyclizing];
AltName: Full=Uroporphyrinogen-III cosynthase
gi|41667|emb|CAA31133.1| unnamed protein product [Escherichia coli]
gi|148203|gb|AAA67600.1| uroporphyrinogen III synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|1790236|gb|AAC76807.1| uroporphyrinogen III synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|85676247|dbj|BAE77497.1| uroporphyrinogen III synthase [Escherichia coli str. K12 substr.
W3110]
gi|169891122|gb|ACB04829.1| uroporphyrinogen III synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|238863777|gb|ACR65775.1| uroporphyrinogen III synthase [Escherichia coli BW2952]
gi|260451353|gb|ACX41775.1| Uroporphyrinogen-III synthase [Escherichia coli DH1]
gi|300317909|gb|EFJ67693.1| uroporphyrinogen-III synthase [Escherichia coli MS 175-1]
gi|300411604|gb|EFJ94914.1| uroporphyrinogen-III synthase [Escherichia coli MS 115-1]
gi|300450240|gb|EFK13860.1| uroporphyrinogen-III synthase [Escherichia coli MS 116-1]
gi|301075656|gb|EFK90462.1| uroporphyrinogen-III synthase [Escherichia coli MS 146-1]
gi|315138380|dbj|BAJ45539.1| uroporphyrinogen-III synthase [Escherichia coli DH1]
gi|323938940|gb|EGB35159.1| uroporphyrinogen-III synthase HemD [Escherichia coli E482]
gi|331036209|gb|EGI08444.1| uroporphyrinogen-III synthase [Escherichia coli H736]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F + + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|15804392|ref|NP_290432.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 EDL933]
gi|15833988|ref|NP_312761.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str. Sakai]
gi|157163277|ref|YP_001460595.1| uroporphyrinogen-III synthase [Escherichia coli HS]
gi|168750386|ref|ZP_02775408.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4113]
gi|168753699|ref|ZP_02778706.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4401]
gi|168763927|ref|ZP_02788934.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4501]
gi|168768083|ref|ZP_02793090.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4486]
gi|168775647|ref|ZP_02800654.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4196]
gi|168780701|ref|ZP_02805708.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4076]
gi|168786640|ref|ZP_02811647.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str. EC869]
gi|168801134|ref|ZP_02826141.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str. EC508]
gi|195938091|ref|ZP_03083473.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4024]
gi|208809689|ref|ZP_03252026.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4206]
gi|208813950|ref|ZP_03255279.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4045]
gi|208821889|ref|ZP_03262209.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4042]
gi|209400120|ref|YP_002273320.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4115]
gi|217325408|ref|ZP_03441492.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
TW14588]
gi|254795800|ref|YP_003080637.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
TW14359]
gi|261225577|ref|ZP_05939858.1| uroporphyrinogen III synthase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255623|ref|ZP_05948156.1| uroporphyrinogen III synthase [Escherichia coli O157:H7 str.
FRIK966]
gi|291285217|ref|YP_003502035.1| Uroporphyrinogen-III synthase [Escherichia coli O55:H7 str. CB9615]
gi|300904057|ref|ZP_07121937.1| uroporphyrinogen-III synthase [Escherichia coli MS 84-1]
gi|301303698|ref|ZP_07209819.1| uroporphyrinogen-III synthase [Escherichia coli MS 124-1]
gi|12518668|gb|AAG58996.1|AE005611_6 uroporphyrinogen III synthase [Escherichia coli O157:H7 str.
EDL933]
gi|13364210|dbj|BAB38157.1| uroporphyrinogen III synthase [Escherichia coli O157:H7 str. Sakai]
gi|157068957|gb|ABV08212.1| uroporphyrinogen-III synthase [Escherichia coli HS]
gi|187768903|gb|EDU32747.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4196]
gi|188015453|gb|EDU53575.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4113]
gi|189001433|gb|EDU70419.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4076]
gi|189358988|gb|EDU77407.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4401]
gi|189362583|gb|EDU81002.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4486]
gi|189365965|gb|EDU84381.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4501]
gi|189373205|gb|EDU91621.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str. EC869]
gi|189376692|gb|EDU95108.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str. EC508]
gi|208729490|gb|EDZ79091.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4206]
gi|208735227|gb|EDZ83914.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4045]
gi|208742012|gb|EDZ89694.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4042]
gi|209161520|gb|ACI38953.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC4115]
gi|209753318|gb|ACI74966.1| porphobilinogen deaminase [Escherichia coli]
gi|209753320|gb|ACI74967.1| porphobilinogen deaminase [Escherichia coli]
gi|209753322|gb|ACI74968.1| porphobilinogen deaminase [Escherichia coli]
gi|209753324|gb|ACI74969.1| porphobilinogen deaminase [Escherichia coli]
gi|209753326|gb|ACI74970.1| porphobilinogen deaminase [Escherichia coli]
gi|217321629|gb|EEC30053.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
TW14588]
gi|254595200|gb|ACT74561.1| uroporphyrinogen III synthase [Escherichia coli O157:H7 str.
TW14359]
gi|290765090|gb|ADD59051.1| Uroporphyrinogen-III synthase [Escherichia coli O55:H7 str. CB9615]
gi|300403937|gb|EFJ87475.1| uroporphyrinogen-III synthase [Escherichia coli MS 84-1]
gi|300840998|gb|EFK68758.1| uroporphyrinogen-III synthase [Escherichia coli MS 124-1]
gi|315254167|gb|EFU34135.1| uroporphyrinogen-III synthase [Escherichia coli MS 85-1]
gi|320191104|gb|EFW65754.1| Uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
EC1212]
gi|320639286|gb|EFX08908.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str. G5101]
gi|320644671|gb|EFX13721.1| uroporphyrinogen-III synthase [Escherichia coli O157:H- str.
493-89]
gi|320649996|gb|EFX18499.1| uroporphyrinogen-III synthase [Escherichia coli O157:H- str. H
2687]
gi|320655342|gb|EFX23284.1| uroporphyrinogen-III synthase [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320660968|gb|EFX28411.1| uroporphyrinogen-III synthase [Escherichia coli O55:H7 str. USDA
5905]
gi|320666092|gb|EFX33106.1| uroporphyrinogen-III synthase [Escherichia coli O157:H7 str.
LSU-61]
gi|326344259|gb|EGD68019.1| Uroporphyrinogen-III synthase [Escherichia coli O157:H7 str. 1125]
gi|326347913|gb|EGD71627.1| Uroporphyrinogen-III synthase [Escherichia coli O157:H7 str. 1044]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEA------SACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPNYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|82546155|ref|YP_410102.1| uroporphyrinogen-III synthase [Shigella boydii Sb227]
gi|81247566|gb|ABB68274.1| uroporphyrinogen III synthase [Shigella boydii Sb227]
gi|320176045|gb|EFW51114.1| Uroporphyrinogen-III synthase [Shigella dysenteriae CDC 74-1112]
gi|320185464|gb|EFW60233.1| Uroporphyrinogen-III synthase [Shigella flexneri CDC 796-83]
gi|332089071|gb|EGI94182.1| uroporphyrinogen-III synthase [Shigella boydii 3594-74]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 MVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|194438641|ref|ZP_03070729.1| uroporphyrinogen-III synthase [Escherichia coli 101-1]
gi|218701285|ref|YP_002408914.1| uroporphyrinogen-III synthase [Escherichia coli IAI39]
gi|253775573|ref|YP_003038404.1| uroporphyrinogen-III synthase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163745|ref|YP_003046853.1| uroporphyrinogen-III synthase [Escherichia coli B str. REL606]
gi|293413245|ref|ZP_06655907.1| uroporphyrinogen-III synthase [Escherichia coli B354]
gi|297516476|ref|ZP_06934862.1| uroporphyrinogen-III synthase [Escherichia coli OP50]
gi|300930032|ref|ZP_07145464.1| uroporphyrinogen-III synthase [Escherichia coli MS 187-1]
gi|194422445|gb|EDX38444.1| uroporphyrinogen-III synthase [Escherichia coli 101-1]
gi|218371271|emb|CAR19105.1| uroporphyrinogen III synthase [Escherichia coli IAI39]
gi|242379334|emb|CAQ34145.1| uroporphyrinogen III synthase [Escherichia coli BL21(DE3)]
gi|253326617|gb|ACT31219.1| Uroporphyrinogen-III synthase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975646|gb|ACT41317.1| uroporphyrinogen-III synthetase [Escherichia coli B str. REL606]
gi|253979802|gb|ACT45472.1| uroporphyrinogen-III synthetase [Escherichia coli BL21(DE3)]
gi|291468193|gb|EFF10690.1| uroporphyrinogen-III synthase [Escherichia coli B354]
gi|300462065|gb|EFK25558.1| uroporphyrinogen-III synthase [Escherichia coli MS 187-1]
gi|323959058|gb|EGB54727.1| uroporphyrinogen-III synthase HemD [Escherichia coli H489]
gi|323969356|gb|EGB64655.1| uroporphyrinogen-III synthase HemD [Escherichia coli TA007]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|284923907|emb|CBG37006.1| uroporphyrinogen III synthase [Escherichia coli 042]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRQPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|170022173|ref|YP_001727127.1| uroporphyrinogen-III synthase [Escherichia coli ATCC 8739]
gi|188495622|ref|ZP_03002892.1| uroporphyrinogen-III synthase [Escherichia coli 53638]
gi|312971914|ref|ZP_07786088.1| uroporphyrinogen-III synthase [Escherichia coli 1827-70]
gi|169757101|gb|ACA79800.1| Uroporphyrinogen-III synthase [Escherichia coli ATCC 8739]
gi|188490821|gb|EDU65924.1| uroporphyrinogen-III synthase [Escherichia coli 53638]
gi|310334291|gb|EFQ00496.1| uroporphyrinogen-III synthase [Escherichia coli 1827-70]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F + + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|254393334|ref|ZP_05008482.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces clavuligerus ATCC 27064]
gi|197706969|gb|EDY52781.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces clavuligerus ATCC 27064]
Length = 527
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 273 RVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 332
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 333 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTARALVDFGVKPDLVPSGEQSAAGLLE 392
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 393 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 452
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 453 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVH 512
Query: 223 SLLKLLP 229
L + L
Sbjct: 513 RLAEALA 519
>gi|155241761|gb|ABT18043.1| CysG(A)/HemD fusion protein [Heliobacillus mobilis]
Length = 515
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 70/251 (27%), Gaps = 27/251 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSS 57
IV+TR ++A +++++G P P + L Y I TS
Sbjct: 258 RIVVTRSRQQASAFASRLEELGAEPWEFPTIDIQEPADLAPLENAISKIHEYEWIIFTSP 317
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ F + + AIG + ++ G F + A+ IVE
Sbjct: 318 NGVQRFFERFFTNGHDIRELFNVRLCAIGPQTRKELQKFGLKVDFVPE---EYRAEAIVE 374
Query: 109 QKVLFTPQK--PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
K ++ + L + + Y + T ++ +++
Sbjct: 375 GLKNLDDWKGRKVLLPRADIARKILPEALTSFGAEVDDVVAYRTVRGGGDATLLRQMMEE 434
Query: 167 ADA--ILFYARSSVLYFFSLPLPAKIS-------AAFLCLSNNIASAIPASYKNVVTVAC 217
+ F + S+ F + + + + V A
Sbjct: 435 KMISAVTFTSSSTARNFVEMLGVDAAERERLLDGVTLASIGPITSDTMKELGLRVDVEAT 494
Query: 218 FPKETSLLKLL 228
L + L
Sbjct: 495 EYTIPGLTRAL 505
>gi|302553239|ref|ZP_07305581.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces viridochromogenes DSM 40736]
gi|302470857|gb|EFL33950.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces viridochromogenes DSM 40736]
Length = 568
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 75/247 (30%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A+ ++++ G +P +P R + Y IA T
Sbjct: 288 KVLVPRTKEQAVSLSDQLRSYGAVPSEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 347
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 348 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAKALIAFGVKPDLVPSGEQSAAGLLE 407
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 408 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 467
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V +A P
Sbjct: 468 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMAPEPSVL 527
Query: 223 SLLKLLP 229
L + L
Sbjct: 528 KLAEALA 534
>gi|238892404|ref|YP_002917138.1| uroporphyrinogen-III synthase [Klebsiella pneumoniae NTUH-K2044]
gi|238544720|dbj|BAH61071.1| uroporphyrinogen-III synthetase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 76/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITS 56
M I++TRP+ + +++ MG + PL F RE LA + S
Sbjct: 1 MSILVTRPLPQGEALVSRLRAMGRVAWSFPLIEFTPGRELPALGDALARLGPDDLLFALS 60
Query: 57 SESLSTLPAN------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ A +P + + LA Q H + ++ +
Sbjct: 61 QHAVEFAHARLQQQGLLWPTSPRYFAIGRTTALALHTVSGQHIHYPLDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G L E + +CY Y E M+ +
Sbjct: 121 LQNIAGKNALILRGNGGRELLGATLTERGARVTFCECYQRSAKHYDGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + + +S +A + VA +
Sbjct: 181 TLVVTSGEMLQQLWSLIPQWYREQWLLHCRVVVVSERLALQARELGWQEIQVADSADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|254388879|ref|ZP_05004111.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces clavuligerus ATCC 27064]
gi|294813174|ref|ZP_06771817.1| Uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces clavuligerus ATCC 27064]
gi|326441529|ref|ZP_08216263.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces clavuligerus ATCC 27064]
gi|197702598|gb|EDY48410.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces clavuligerus ATCC 27064]
gi|294325773|gb|EFG07416.1| Uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces clavuligerus ATCC 27064]
Length = 552
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 273 RVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 332
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 333 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTARALVDFGVKPDLVPSGEQSAAGLLE 392
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 393 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 452
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 453 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVH 512
Query: 223 SLLKLLP 229
L + L
Sbjct: 513 RLAEALA 519
>gi|215489130|ref|YP_002331561.1| uroporphyrinogen-III synthase [Escherichia coli O127:H6 str.
E2348/69]
gi|312969470|ref|ZP_07783672.1| uroporphyrinogen-III synthase [Escherichia coli 2362-75]
gi|215267202|emb|CAS11650.1| uroporphyrinogen III synthase [Escherichia coli O127:H6 str.
E2348/69]
gi|312286017|gb|EFR13935.1| uroporphyrinogen-III synthase [Escherichia coli 2362-75]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPQLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|157156739|ref|YP_001465285.1| uroporphyrinogen-III synthase [Escherichia coli E24377A]
gi|191166118|ref|ZP_03027953.1| uroporphyrinogen-III synthase [Escherichia coli B7A]
gi|193065707|ref|ZP_03046772.1| uroporphyrinogen-III synthase [Escherichia coli E22]
gi|193067968|ref|ZP_03048933.1| uroporphyrinogen-III synthase [Escherichia coli E110019]
gi|194429210|ref|ZP_03061738.1| uroporphyrinogen-III synthase [Escherichia coli B171]
gi|209921276|ref|YP_002295360.1| uroporphyrinogen-III synthase [Escherichia coli SE11]
gi|218556363|ref|YP_002389277.1| uroporphyrinogen-III synthase [Escherichia coli IAI1]
gi|218697518|ref|YP_002405185.1| uroporphyrinogen-III synthase [Escherichia coli 55989]
gi|256021455|ref|ZP_05435320.1| uroporphyrinogen-III synthase [Shigella sp. D9]
gi|260846423|ref|YP_003224201.1| uroporphyrinogen III synthase HemD [Escherichia coli O103:H2 str.
12009]
gi|260857793|ref|YP_003231684.1| uroporphyrinogen III synthase HemD [Escherichia coli O26:H11 str.
11368]
gi|260870526|ref|YP_003236928.1| uroporphyrinogen III synthase HemD [Escherichia coli O111:H- str.
11128]
gi|293468118|ref|ZP_06664530.1| uroporphyrinogen-III synthase [Escherichia coli B088]
gi|300818727|ref|ZP_07098934.1| uroporphyrinogen-III synthase [Escherichia coli MS 107-1]
gi|300823335|ref|ZP_07103466.1| uroporphyrinogen-III synthase [Escherichia coli MS 119-7]
gi|300923303|ref|ZP_07139351.1| uroporphyrinogen-III synthase [Escherichia coli MS 182-1]
gi|301328439|ref|ZP_07221520.1| uroporphyrinogen-III synthase [Escherichia coli MS 78-1]
gi|309796257|ref|ZP_07690667.1| uroporphyrinogen-III synthase [Escherichia coli MS 145-7]
gi|331670647|ref|ZP_08371484.1| uroporphyrinogen-III synthase [Escherichia coli TA271]
gi|331679911|ref|ZP_08380574.1| uroporphyrinogen-III synthase [Escherichia coli H591]
gi|332282691|ref|ZP_08395104.1| uroporphyrinogen-III synthase [Shigella sp. D9]
gi|157078769|gb|ABV18477.1| uroporphyrinogen-III synthase [Escherichia coli E24377A]
gi|190903894|gb|EDV63608.1| uroporphyrinogen-III synthase [Escherichia coli B7A]
gi|192926674|gb|EDV81303.1| uroporphyrinogen-III synthase [Escherichia coli E22]
gi|192958588|gb|EDV89026.1| uroporphyrinogen-III synthase [Escherichia coli E110019]
gi|194412722|gb|EDX29016.1| uroporphyrinogen-III synthase [Escherichia coli B171]
gi|209914535|dbj|BAG79609.1| uroporphyrinogen III synthase [Escherichia coli SE11]
gi|218354250|emb|CAV00921.1| uroporphyrinogen III synthase [Escherichia coli 55989]
gi|218363132|emb|CAR00773.1| uroporphyrinogen III synthase [Escherichia coli IAI1]
gi|257756442|dbj|BAI27944.1| uroporphyrinogen III synthase HemD [Escherichia coli O26:H11 str.
11368]
gi|257761570|dbj|BAI33067.1| uroporphyrinogen III synthase HemD [Escherichia coli O103:H2 str.
12009]
gi|257766882|dbj|BAI38377.1| uroporphyrinogen III synthase HemD [Escherichia coli O111:H- str.
11128]
gi|291321496|gb|EFE60934.1| uroporphyrinogen-III synthase [Escherichia coli B088]
gi|300420389|gb|EFK03700.1| uroporphyrinogen-III synthase [Escherichia coli MS 182-1]
gi|300524121|gb|EFK45190.1| uroporphyrinogen-III synthase [Escherichia coli MS 119-7]
gi|300528693|gb|EFK49755.1| uroporphyrinogen-III synthase [Escherichia coli MS 107-1]
gi|300845149|gb|EFK72909.1| uroporphyrinogen-III synthase [Escherichia coli MS 78-1]
gi|308120139|gb|EFO57401.1| uroporphyrinogen-III synthase [Escherichia coli MS 145-7]
gi|320198490|gb|EFW73091.1| Uroporphyrinogen-III synthase [Escherichia coli EC4100B]
gi|323161135|gb|EFZ47053.1| uroporphyrinogen-III synthase [Escherichia coli E128010]
gi|323182575|gb|EFZ67979.1| uroporphyrinogen-III synthase [Escherichia coli 1357]
gi|323943797|gb|EGB39892.1| uroporphyrinogen-III synthase HemD [Escherichia coli H120]
gi|324016227|gb|EGB85446.1| uroporphyrinogen-III synthase [Escherichia coli MS 117-3]
gi|324115736|gb|EGC09671.1| uroporphyrinogen-III synthase HemD [Escherichia coli E1167]
gi|331062120|gb|EGI34042.1| uroporphyrinogen-III synthase [Escherichia coli TA271]
gi|331072458|gb|EGI43790.1| uroporphyrinogen-III synthase [Escherichia coli H591]
gi|332105043|gb|EGJ08389.1| uroporphyrinogen-III synthase [Shigella sp. D9]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|82779018|ref|YP_405367.1| uroporphyrinogen-III synthase [Shigella dysenteriae Sd197]
gi|293417267|ref|ZP_06659892.1| uroporphyrinogen-III synthase [Escherichia coli B185]
gi|81243166|gb|ABB63876.1| uroporphyrinogen III synthase [Shigella dysenteriae Sd197]
gi|291431035|gb|EFF04030.1| uroporphyrinogen-III synthase [Escherichia coli B185]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPTYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|309704239|emb|CBJ03587.1| uroporphyrinogen III synthase [Escherichia coli ETEC H10407]
Length = 246
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F + + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEILQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|152972792|ref|YP_001337938.1| uroporphyrinogen-III synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262040886|ref|ZP_06014112.1| uroporphyrinogen-III synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329997498|ref|ZP_08302800.1| uroporphyrinogen-III synthase [Klebsiella sp. MS 92-3]
gi|150957641|gb|ABR79671.1| uroporphyrinogen-III synthetase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259041775|gb|EEW42820.1| uroporphyrinogen-III synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328539066|gb|EGF65105.1| uroporphyrinogen-III synthase [Klebsiella sp. MS 92-3]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 76/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITS 56
M I++TRP+ + +++ MG + PL F RE LA + S
Sbjct: 1 MSILVTRPLPQGEALVSRLRAMGRVAWSFPLIEFTPGRELPALGDALARLGPDDLLFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ A +P + + LA Q H + ++ +
Sbjct: 61 QHAVEFAHARLQQQGLPWPTSPRYFAIGRTTALALHTVSGQHIHYPLDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G L E + +CY Y E M+ +
Sbjct: 121 LQNIAGKNALILRGNGGRELLGATLTERGARVTFCECYQRSAKHYDGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + + +S +A + VA +
Sbjct: 181 TLVVTSGEMLQQLWSLIPQWYREQWLLHCRVVVVSERLALQARELGWQEIQVADSADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|24115096|ref|NP_709606.1| uroporphyrinogen-III synthase [Shigella flexneri 2a str. 301]
gi|30064903|ref|NP_839074.1| uroporphyrinogen-III synthase [Shigella flexneri 2a str. 2457T]
gi|110807508|ref|YP_691028.1| uroporphyrinogen-III synthase [Shigella flexneri 5 str. 8401]
gi|194434029|ref|ZP_03066299.1| uroporphyrinogen-III synthase [Shigella dysenteriae 1012]
gi|24054363|gb|AAN45313.1| uroporphyrinogen III synthase [Shigella flexneri 2a str. 301]
gi|30043163|gb|AAP18885.1| uroporphyrinogen III synthase [Shigella flexneri 2a str. 2457T]
gi|110617056|gb|ABF05723.1| uroporphyrinogen III synthase [Shigella flexneri 5 str. 8401]
gi|194417687|gb|EDX33786.1| uroporphyrinogen-III synthase [Shigella dysenteriae 1012]
gi|281603193|gb|ADA76177.1| Uroporphyrinogen III synthase [Shigella flexneri 2002017]
gi|332084682|gb|EGI89870.1| uroporphyrinogen-III synthase [Shigella boydii 5216-82]
gi|332751934|gb|EGJ82329.1| uroporphyrinogen-III synthase [Shigella flexneri 2747-71]
gi|332764356|gb|EGJ94591.1| uroporphyrinogen-III synthase HemD family protein [Shigella
flexneri 2930-71]
gi|333013795|gb|EGK33158.1| uroporphyrinogen-III synthase [Shigella flexneri K-227]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPQLPTYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTVRGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|320197613|gb|EFW72225.1| Uroporphyrinogen-III synthase [Escherichia coli WV_060327]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPTYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSRKVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|295695322|ref|YP_003588560.1| uroporphyrin-III C-methyltransferase [Bacillus tusciae DSM 2912]
gi|295410924|gb|ADG05416.1| uroporphyrin-III C-methyltransferase [Bacillus tusciae DSM 2912]
Length = 519
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 78/248 (31%), Gaps = 22/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIAITSSE 58
I++TR ++A +I+ +G V P L I +TS
Sbjct: 264 RILVTRAREQASALSAQIEDLGGEAVEFPAIRIEPPASWADLDEALTRSDLKWIVLTSRH 323
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNS-INLAKIIVE 108
++ ++ + + A+G A+A R++G F D LA+ +V
Sbjct: 324 AVESVWSRMRALELDVRRLSGVRMAAVGPATAGALRERGVIPEFTASDYRGQALAETLVP 383
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
++ + + L + + Y ++ ++ LL+
Sbjct: 384 HIASGD---VILLPRSNLASRDVPEVLSAAGAAVVEAEAYRTEPGYEGAEEVRGLLREGR 440
Query: 169 AI--LFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
F + S+V +F P C+ A+ V VA
Sbjct: 441 IHAVTFTSSSTVRFFLQGIGEEARPWLEHVPAFCIGPVTAATARELGLKVAGVAEQATVD 500
Query: 223 SLLKLLPL 230
SL+ LL
Sbjct: 501 SLVDLLAR 508
>gi|261823397|ref|YP_003261503.1| uroporphyrinogen-III synthase [Pectobacterium wasabiae WPP163]
gi|261607410|gb|ACX89896.1| Uroporphyrinogen-III synthase [Pectobacterium wasabiae WPP163]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++K+GY PL F RE L + + S
Sbjct: 1 MTILVTRPSPTGEQLVTRLRKLGYHAWHSPLIEFSPGRELAGLPAQLQALHTDDLVFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + LA K ++ +
Sbjct: 61 QHAIHYADPMLTRTGTSWPAHLAYYAIGRTTALALHKISAHPVAYPPERETSETLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G + L E + +CY +D+ Y + Q
Sbjct: 121 LQDVAGKRALLLRGNGGRELLGETLTERGAQVTYCECYQRRDVHYDGSEQSRHWQQIGID 180
Query: 170 -ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S +A + + VA +
Sbjct: 181 KLVITSGEMLQRIYTLVPDYYRASWLLGCQLIVVSERLAEQARQLGWHDIRVADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LVRALQ 246
>gi|271502387|ref|YP_003335413.1| Uroporphyrinogen-III synthase [Dickeya dadantii Ech586]
gi|270345942|gb|ACZ78707.1| Uroporphyrinogen-III synthase [Dickeya dadantii Ech586]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 70/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++ G PL F E L + + S
Sbjct: 1 MTILVTRPSPAGEQLVARLRMAGLQAYHSPLIEFSPGSELPQLPAMLQALRPGDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF------HGKDNSINLAKIIVEQK 110
+ + R + + R G H ++
Sbjct: 61 QQVVEYADPALSRAGMGWPESLTYFAVGRATGLALHTVSGLAVHYPPERATSETLLQSPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +R +CY + Y E + D
Sbjct: 121 LQHVTGKQALLLRGNGGRELLGDTLQQRGAQVRYCECYQRNPVVYDGAEQCQRWQRLGID 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + F++L + + +S +A + +A +
Sbjct: 181 TLVITSGEMLQQFYTLVPDYYRTTWLVDCRVVVVSERLADVARELGWRDIRIADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LMRALQ 246
>gi|146336|gb|AAA23956.1| uroporphyrinogen-III cosynthetase (EC 4.2.1.75) [Escherichia coli]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F + + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLAARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|170769851|ref|ZP_02904304.1| uroporphyrinogen-III synthase [Escherichia albertii TW07627]
gi|170121289|gb|EDS90220.1| uroporphyrinogen-III synthase [Escherichia albertii TW07627]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 73/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRALGQVAWHFPLIEFSPGRQLPQLADQLTALGEGDLLFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + P + + LA + ++ +
Sbjct: 61 QHAVAFAQSQLHQQSLEWPTLPAYFAIGRTTALALHTVSGHNVRYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY I Y E M+ +
Sbjct: 121 LQNIVGKRALVLRGNGGRELIGENLTARGAEVVFCECYQRCAIHYDGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I+ + + ++L + L +S +A + VA +
Sbjct: 181 TIVVTSGEMLQQLWTLIPQWYREHWLLCCRLLVVSERLAKLARELGWKDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|331685521|ref|ZP_08386105.1| uroporphyrinogen-III synthase [Escherichia coli H299]
gi|331077222|gb|EGI48436.1| uroporphyrinogen-III synthase [Escherichia coli H299]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MTILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|188585751|ref|YP_001917296.1| uroporphyrinogen-III C-methyltransferase, uroporphyrinogen-III
synthase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350438|gb|ACB84708.1| uroporphyrinogen-III C-methyltransferase, uroporphyrinogen-III
synthase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 516
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 41/251 (16%), Positives = 73/251 (29%), Gaps = 26/251 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
I++TR +A KI ++G PV P + Y + TS
Sbjct: 255 NILVTRARSQASELSYKISQLGGQPVEFPTIKIEKPDTYQPLDEAIKKLAEYNWLVFTSV 314
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ AIG + +KG ++ +I
Sbjct: 315 NGVKHFFNRLENLDYDCRQLAGLKTCAIGSKTKESLEEKGIKADVVPQEYRA--EALIDL 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
K ++ K + L E + + VI Y + ++ +L+
Sbjct: 373 MKEQVKSGDRVLIPRAKEAREVLPEALREQGLKVDVITAYETVKDTKDTEKVRKMLKQNE 432
Query: 168 -DAILFYARSSVLYFFSLP---------LPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
DAI F + S+V F + + C+ AS V ++A
Sbjct: 433 LDAITFTSSSTVKNFVEVLELNVGLNEPGAVLANTHIACIGPITASTCQQYGIEVNSIAN 492
Query: 218 FPKETSLLKLL 228
L++ L
Sbjct: 493 EYTIPGLVESL 503
>gi|91213325|ref|YP_543311.1| uroporphyrinogen-III synthase [Escherichia coli UTI89]
gi|110644127|ref|YP_671857.1| uroporphyrinogen-III synthase [Escherichia coli 536]
gi|117626061|ref|YP_859384.1| uroporphyrinogen-III synthase [Escherichia coli APEC O1]
gi|170683392|ref|YP_001746120.1| uroporphyrinogen-III synthase [Escherichia coli SMS-3-5]
gi|191174257|ref|ZP_03035766.1| uroporphyrinogen-III synthase [Escherichia coli F11]
gi|218560867|ref|YP_002393780.1| uroporphyrinogen-III synthase [Escherichia coli S88]
gi|237702811|ref|ZP_04533292.1| uroporphyrinogen-III synthetase [Escherichia sp. 3_2_53FAA]
gi|300979363|ref|ZP_07174521.1| uroporphyrinogen-III synthase [Escherichia coli MS 200-1]
gi|331660147|ref|ZP_08361083.1| uroporphyrinogen-III synthase [Escherichia coli TA206]
gi|91074899|gb|ABE09780.1| uroporphyrinogen-III synthase [Escherichia coli UTI89]
gi|110345719|gb|ABG71956.1| uroporphyrinogen-III synthase HemD [Escherichia coli 536]
gi|115515185|gb|ABJ03260.1| uroporphyrinogen-III synthetase [Escherichia coli APEC O1]
gi|170521110|gb|ACB19288.1| uroporphyrinogen-III synthase [Escherichia coli SMS-3-5]
gi|190905440|gb|EDV65070.1| uroporphyrinogen-III synthase [Escherichia coli F11]
gi|218367636|emb|CAR05419.1| uroporphyrinogen III synthase [Escherichia coli S88]
gi|222035502|emb|CAP78247.1| Uroporphyrinogen-III synthase [Escherichia coli LF82]
gi|226902982|gb|EEH89241.1| uroporphyrinogen-III synthetase [Escherichia sp. 3_2_53FAA]
gi|294493008|gb|ADE91764.1| uroporphyrinogen-III synthase [Escherichia coli IHE3034]
gi|300308035|gb|EFJ62555.1| uroporphyrinogen-III synthase [Escherichia coli MS 200-1]
gi|307628865|gb|ADN73169.1| uroporphyrinogen-III synthase [Escherichia coli UM146]
gi|312948357|gb|ADR29184.1| uroporphyrinogen-III synthase [Escherichia coli O83:H1 str. NRG
857C]
gi|315284724|gb|EFU44169.1| uroporphyrinogen-III synthase [Escherichia coli MS 110-3]
gi|315296782|gb|EFU56074.1| uroporphyrinogen-III synthase [Escherichia coli MS 16-3]
gi|323949315|gb|EGB45205.1| uroporphyrinogen-III synthase HemD [Escherichia coli H252]
gi|323954008|gb|EGB49806.1| uroporphyrinogen-III synthase HemD [Escherichia coli H263]
gi|324007477|gb|EGB76696.1| uroporphyrinogen-III synthase [Escherichia coli MS 57-2]
gi|324014707|gb|EGB83926.1| uroporphyrinogen-III synthase [Escherichia coli MS 60-1]
gi|331052715|gb|EGI24750.1| uroporphyrinogen-III synthase [Escherichia coli TA206]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|283787519|ref|YP_003367384.1| uroporphyrinogen III synthase [Citrobacter rodentium ICC168]
gi|282950973|emb|CBG90650.1| uroporphyrinogen III synthase [Citrobacter rodentium ICC168]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 70/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITS 56
M I++TRP +++ +G PL F R+ LA + S
Sbjct: 1 MSILVTRPSPAGEALVSRLRTLGLEAWSFPLIEFTPGRDLPLLGDALAALTDNDLLFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++S A P + + LA + ++ +
Sbjct: 61 QHAVSFAHAQLERQGGKWPAAPRYFAIGRTTALALHTVSGHDIRYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGADVAFCECYQRSAKHYDGAEEAMRWQARGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +L + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLAALIPQWYRENWLLRCRLLVVSERLAHLARELGWQDIQVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|253991599|ref|YP_003042955.1| uroporphyrinogen-III synthase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783049|emb|CAQ86214.1| uroporphyrinogen-iii synthase (uros) (uroporphyrinogen-ii
cosynthetase) (hydroxymethylbilane hydrolyase
[cyclizing]) [Photorhabdus asymbiotica]
Length = 246
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 70/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP ++Q G PL E LA + + + S
Sbjct: 1 MSILVTRPSPAGEELVRRLQTAGKTAFSAPLIDIRPGSELSQLAEKLCCLNTGDMVFLLS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + I+ S LA + ++
Sbjct: 61 KNAVYYANSQLKKINLSWPNKLIYYAIGRSTALAFHQLTGINITWSSEGETSETLLELPS 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G L E + +CY+ Q + Y Q
Sbjct: 121 LHQVKNKQALLLRGNGGRELIAQTLTERGATVNYCECYFRQRVDYSAAEFSARWQRYGVQ 180
Query: 170 -ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L ++ + +S +A V VA +
Sbjct: 181 TLVVTSGEILQLLYNLVPKSDRNRWLLNCHLIVVSERLAYTARNLGWQDVKVAKSADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LIQALE 246
>gi|282865643|ref|ZP_06274694.1| Uroporphyrinogen III synthase HEM4 [Streptomyces sp. ACTE]
gi|282559687|gb|EFB65238.1| Uroporphyrinogen III synthase HEM4 [Streptomyces sp. ACTE]
Length = 464
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 184 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 243
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 244 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALIDFGVKPDLVPSGEQSAAGLLE 303
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 304 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 363
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 364 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVH 423
Query: 223 SLLKLLP 229
L + L
Sbjct: 424 KLAQALA 430
>gi|307313622|ref|ZP_07593242.1| Uroporphyrinogen-III synthase [Escherichia coli W]
gi|306906603|gb|EFN37115.1| Uroporphyrinogen-III synthase [Escherichia coli W]
gi|315063096|gb|ADT77423.1| uroporphyrinogen III synthase [Escherichia coli W]
gi|323380840|gb|ADX53108.1| Uroporphyrinogen III synthase HEM4 [Escherichia coli KO11]
Length = 246
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLAEQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|218707438|ref|YP_002414957.1| uroporphyrinogen-III synthase [Escherichia coli UMN026]
gi|293407431|ref|ZP_06651351.1| hemD [Escherichia coli FVEC1412]
gi|298383171|ref|ZP_06992765.1| uroporphyrinogen-III synthase [Escherichia coli FVEC1302]
gi|300900648|ref|ZP_07118806.1| uroporphyrinogen-III synthase [Escherichia coli MS 198-1]
gi|301025753|ref|ZP_07189268.1| uroporphyrinogen-III synthase [Escherichia coli MS 69-1]
gi|331665449|ref|ZP_08366348.1| uroporphyrinogen-III synthase [Escherichia coli TA143]
gi|331675272|ref|ZP_08376023.1| uroporphyrinogen-III synthase [Escherichia coli TA280]
gi|218434535|emb|CAR15461.1| uroporphyrinogen III synthase [Escherichia coli UMN026]
gi|291425542|gb|EFE98580.1| hemD [Escherichia coli FVEC1412]
gi|298276407|gb|EFI17926.1| uroporphyrinogen-III synthase [Escherichia coli FVEC1302]
gi|300355864|gb|EFJ71734.1| uroporphyrinogen-III synthase [Escherichia coli MS 198-1]
gi|300395876|gb|EFJ79414.1| uroporphyrinogen-III synthase [Escherichia coli MS 69-1]
gi|331057347|gb|EGI29336.1| uroporphyrinogen-III synthase [Escherichia coli TA143]
gi|331067558|gb|EGI38962.1| uroporphyrinogen-III synthase [Escherichia coli TA280]
Length = 246
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGERDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|254382513|ref|ZP_04997872.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. Mg1]
gi|194341417|gb|EDX22383.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. Mg1]
Length = 555
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 75/247 (30%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 276 RVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 335
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A + G L +
Sbjct: 336 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALVEFGVKPDLVPSGEQSAAGLLE 395
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 396 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPADTREAI 455
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 456 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVG 515
Query: 223 SLLKLLP 229
L + L
Sbjct: 516 KLAEALA 522
>gi|239942155|ref|ZP_04694092.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Streptomyces roseosporus NRRL 15998]
gi|239988618|ref|ZP_04709282.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Streptomyces roseosporus NRRL 11379]
Length = 464
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 184 RVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 243
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 244 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALIDFGVKPDLVPSGEQSAAGLLE 303
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 304 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPADTREAI 363
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 364 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVH 423
Query: 223 SLLKLLP 229
L + L
Sbjct: 424 KLAEALA 430
>gi|239929696|ref|ZP_04686649.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces ghanaensis ATCC 14672]
gi|291438016|ref|ZP_06577406.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces ghanaensis ATCC 14672]
gi|291340911|gb|EFE67867.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces ghanaensis ATCC 14672]
Length = 570
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 289 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 348
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+G+ +A G L +
Sbjct: 349 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGDQTAKALIDFGVRPDLVPSGEQSARGLVE 408
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 409 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 468
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA++F + S+V + C+ A V +A P
Sbjct: 469 KGGGFDAVMFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMAPEPSVH 528
Query: 223 SLLKLLP 229
L + L
Sbjct: 529 KLAEALA 535
>gi|317484897|ref|ZP_07943786.1| uroporphyrin-III C-methyltransferase [Bilophila wadsworthia 3_1_6]
gi|316923835|gb|EFV45032.1| uroporphyrin-III C-methyltransferase [Bilophila wadsworthia 3_1_6]
Length = 517
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 74/248 (29%), Gaps = 24/248 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR ++A ++ +G + P + + +Y + TS+
Sbjct: 263 VVVTRAREQASGLAAQLADLGAEVIQFPTIDIKPLEDYSSVDAAVRNLGAYDWLIFTSAN 322
Query: 59 SLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + AIG A+A R G F + +
Sbjct: 323 GVKCFWERLEAQGLDARALYGLQVAAIGPATAQAVRTHGIAPDFVPEAYIAESVAEGLIG 382
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-- 167
+ K ++ + + L + + V+ Y + A + L+
Sbjct: 383 LGMDG--KKVLLPRAREAREVLPEELRKAGAQVDVLPVYETVPAAAHRDEVLQRLEAGTL 440
Query: 168 DAILFYARSSVLYFFSLP-------LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
DA+ F + S+V FF+ P + F + +
Sbjct: 441 DAVTFGSSSTVDNFFAQIPADTIRNQPEEKRVKFASIGPVTTKTLAKYGFACDIQPEDFT 500
Query: 221 ETSLLKLL 228
++L+K L
Sbjct: 501 ISALVKAL 508
Score = 44.0 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
+++ R + E+++K G ++P+ + + A+ SS
Sbjct: 389 KVLLPRAREAREVLPEELRKAGAQVDVLPVYETVPAAAHRDEVLQRLEAGTLDAVTFGSS 448
Query: 58 ESLSTLPANFC 68
++ A
Sbjct: 449 STVDNFFAQIP 459
>gi|111220452|ref|YP_711246.1| uroporphyrin-III C-methyltransferase [Frankia alni ACN14a]
gi|111147984|emb|CAJ59650.1| uroporphyrin-III C-methyltransferase [Frankia alni ACN14a]
Length = 606
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 19/246 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R ++A + ++ G P+ +P R + + Y +A TS
Sbjct: 332 VLVPRTKEQAAILSDLLRSHGASPLEVPTIAVEPPRTAAPMERAITGLVSGRYQWVAFTS 391
Query: 57 SESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHG--KDNSINLAKI 105
++ L A + AIGEA+A R G + +S L +
Sbjct: 392 VNAVRAVQEKVEERSLDARAFAGVKVAAIGEATAEALRAFGIRPDLVPTGQQSSEGLLED 451
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
E ++ L + + + Y + A P ++ L+
Sbjct: 452 WPEYDESLDLLDRVLLPRADIATETLVAGLKDRGWQVDDVTAYRTVRAAPPPAPIREALK 511
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA++F + S+V + + + A+ V A +
Sbjct: 512 GGRVDAVVFTSSSTVRNLVGIAGKPHETTVIAVIGPATAATAQELGLRVDVQAPEASIPA 571
Query: 224 LLKLLP 229
L+ L
Sbjct: 572 LVGALA 577
>gi|251798412|ref|YP_003013143.1| uroporphyrin-III C-methyltransferase [Paenibacillus sp. JDR-2]
gi|247546038|gb|ACT03057.1| uroporphyrin-III C-methyltransferase [Paenibacillus sp. JDR-2]
Length = 520
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 78/257 (30%), Gaps = 28/257 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV-------FLAMQQSYGAIAI 54
+++TR +A ++I+++G P +P+ R+ LA +SY I
Sbjct: 256 RVLVTRARAQASDLADRIEELGGEPCELPVIETREPRDEAAVEGIRTALAGAESYNWIMF 315
Query: 55 TSSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
TS + R I A+G +A R++G +
Sbjct: 316 TSVNGVEYFFNWLDRFNVDIRRFHAARIAAVGPRTAEALRKRGLIADQLPAKFQA--EGL 373
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + P + ++ G L + +D Y + + ++
Sbjct: 374 LEQLEGELRPGEKVLLPRGDLAREILPRELKAKGLVPVELDVYETVIADSQDEQAFEWIR 433
Query: 166 NADAI--LFYARSSVLYFFSLPLPAKISAA--------FLCLSNNIASAIPASYKNVVTV 215
N + F + S+V L + + + + +V
Sbjct: 434 NREIHAITFTSSSTVTNLLELLRRNGFEDPVAQLAGIDVVSIGPVTSKTASEAGLSVTLE 493
Query: 216 ACFPKETSLLKLLPLRR 232
+L++ L +
Sbjct: 494 PENATIEALVEALVQHQ 510
>gi|182437950|ref|YP_001825669.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326778586|ref|ZP_08237851.1| Uroporphyrinogen-III C-methyltransferase., Uroporphyrinogen-III
synthase [Streptomyces cf. griseus XylebKG-1]
gi|178466466|dbj|BAG20986.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326658919|gb|EGE43765.1| Uroporphyrinogen-III C-methyltransferase., Uroporphyrinogen-III
synthase [Streptomyces cf. griseus XylebKG-1]
Length = 556
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 276 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 335
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 336 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALVDFGVKPDLVPSGEQSAAGLLE 395
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 396 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPADTREAI 455
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 456 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVH 515
Query: 223 SLLKLLP 229
L + L
Sbjct: 516 KLAEALA 522
>gi|320010121|gb|ADW04971.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Streptomyces flavogriseus ATCC 33331]
Length = 555
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 73/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 275 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 334
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE + G L +
Sbjct: 335 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTGAALVDFGVKPDLMPSGEQSAAGLLE 394
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 395 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPADTREAI 454
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 455 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVH 514
Query: 223 SLLKLLP 229
L + L
Sbjct: 515 KLAQALA 521
>gi|26250542|ref|NP_756582.1| uroporphyrinogen-III synthase [Escherichia coli CFT073]
gi|227888614|ref|ZP_04006419.1| uroporphyrinogen-III synthase [Escherichia coli 83972]
gi|300985715|ref|ZP_07177570.1| uroporphyrinogen-III synthase [Escherichia coli MS 45-1]
gi|301047317|ref|ZP_07194403.1| uroporphyrinogen-III synthase [Escherichia coli MS 185-1]
gi|26110972|gb|AAN83156.1|AE016769_271 Uroporphyrinogen-III synthase [Escherichia coli CFT073]
gi|227834453|gb|EEJ44919.1| uroporphyrinogen-III synthase [Escherichia coli 83972]
gi|300300836|gb|EFJ57221.1| uroporphyrinogen-III synthase [Escherichia coli MS 185-1]
gi|300407989|gb|EFJ91527.1| uroporphyrinogen-III synthase [Escherichia coli MS 45-1]
gi|307555928|gb|ADN48703.1| uroporphyrinogen III synthase [Escherichia coli ABU 83972]
gi|315293156|gb|EFU52508.1| uroporphyrinogen-III synthase [Escherichia coli MS 153-1]
Length = 246
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPFPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|187733705|ref|YP_001882497.1| uroporphyrinogen-III synthase [Shigella boydii CDC 3083-94]
gi|187430697|gb|ACD09971.1| uroporphyrinogen-III synthase [Shigella boydii CDC 3083-94]
Length = 246
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCKCYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 MVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|303326273|ref|ZP_07356716.1| uroporphyrinogen III synthase/methyltransferase [Desulfovibrio sp.
3_1_syn3]
gi|302864189|gb|EFL87120.1| uroporphyrinogen III synthase/methyltransferase [Desulfovibrio sp.
3_1_syn3]
Length = 506
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 74/249 (29%), Gaps = 20/249 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
IV+TR ++A + +G + P + +A YG + TS
Sbjct: 254 IVVTRAREQASGLARSLAGLGAEVIQCPTIEIRALPDYAELDAAVARLADYGWLIFTSVN 313
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNS-INLAKIIVE 108
+ + AIG A+A ++G F + + + ++
Sbjct: 314 GVRHFWQRLEAAGKDSRALGACKVAAIGPATADALHERGIRPDFVPERYVAEGVVEGLLA 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
++ ++ L + + VI Y + A + + L+
Sbjct: 374 REGGKLAGTRMLLPRAAKARDVLPVELGKAGATVDVIPAYETVPAAGRKDEVLARLEEGS 433
Query: 168 -DAILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKET 222
+ F + S+V F +L K+ A + A + +
Sbjct: 434 LSCVTFGSSSTVENFLNLIPAEKLKAHPETLLAAIGPVTAETLRKHGLDCRIQPGEYTIP 493
Query: 223 SLLKLLPLR 231
+L+ +
Sbjct: 494 ALVDAITQH 502
>gi|226361137|ref|YP_002778915.1| uroporphyrinogen-III methyltransferase/uroporphyrinogen-III
synthase [Rhodococcus opacus B4]
gi|226239622|dbj|BAH49970.1| putative uroporphyrinogen-III
methyltransferase/uroporphyrinogen-III synthase
[Rhodococcus opacus B4]
Length = 521
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 73/249 (29%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
+++ R +A +++ G IP+ +P R + Y + T
Sbjct: 252 KVLVPRTKDQAGEMSDRLVTHGAIPIEVPTIAVEPPRSPAQMERSVKGLVDGRYQWVVFT 311
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + F I IGEA+A R G + L
Sbjct: 312 STNAVRAVWEKFEEFGLDARAFSGVKIACIGEATAAKVRSFGINPELVPSGEQSSEGLLA 371
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P ++ + L E + + Y + A P + ++
Sbjct: 372 EFAPYDDVFDPVNRVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRAAPPPAETREMI 431
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ A V +
Sbjct: 432 KTGGFDAVCFTSSSTVRNLVGIAGKPHARTLVACIGPKTAETAIEFGLRVDVQPETAQVG 491
Query: 223 SLLKLLPLR 231
L++ L
Sbjct: 492 PLVEALAEH 500
>gi|157144432|ref|YP_001451751.1| uroporphyrinogen-III synthase [Citrobacter koseri ATCC BAA-895]
gi|157081637|gb|ABV11315.1| hypothetical protein CKO_00146 [Citrobacter koseri ATCC BAA-895]
Length = 246
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 72/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP +++ +G + PL F RE LA + S
Sbjct: 1 MSILVTRPSPSGEELVSRLRTLGQVAWSFPLIEFTPGRELATLADRLAALTDNDLVFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A P + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQQQGLDWPVQPRYFAIGRTTALALHTVSGCDIRYPLDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G L E + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGKTLTERGAEVTFCECYQRSAKHYDGAEEAMRWHSRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I+ + + +SL + L +S +A + VA +
Sbjct: 181 TIVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|111019044|ref|YP_702016.1| uroporphiryn-III C-methyltransferase [Rhodococcus jostii RHA1]
gi|110818574|gb|ABG93858.1| probable uroporphiryn-III C-methyltransferase [Rhodococcus jostii
RHA1]
Length = 521
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 73/249 (29%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
+++ R +A +++ G IP+ +P R + Y + T
Sbjct: 252 KVLVPRTKDQAGEMSDRLVTHGAIPIEVPTIAVEPPRSPAQMERSVKGLVDGRYQWVVFT 311
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + F I IGEA+A R G + L
Sbjct: 312 STNAVRAVWEKFEEFGLDARAFSGVKIACIGEATAAKVRSFGINPELVPSGEQSSEGLLA 371
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P ++ + L E + + Y + A P + ++
Sbjct: 372 EFAPYDDVFDPVNRVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRAAPPPAETREMI 431
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ A V +
Sbjct: 432 KTGGFDAVCFTSSSTVRNLVGIAGKPHARTLVACIGPKTAETAIEFGLRVDVQPETAQVG 491
Query: 223 SLLKLLPLR 231
L++ L
Sbjct: 492 PLVEALAEH 500
>gi|297192866|ref|ZP_06910264.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces pristinaespiralis ATCC 25486]
gi|297151526|gb|EFH31218.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces pristinaespiralis ATCC 25486]
Length = 529
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 275 KVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 334
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 335 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALVDFGVKPDLVPSGEQSAAGLLE 394
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 395 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 454
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 455 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVL 514
Query: 223 SLLKLLP 229
L + L
Sbjct: 515 RLAEALA 521
>gi|237786463|ref|YP_002907168.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium kroppenstedtii DSM 44385]
gi|237759375|gb|ACR18625.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium kroppenstedtii DSM 44385]
Length = 552
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 72/249 (28%), Gaps = 20/249 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A ++ + G IP+ +P R + Y I TS
Sbjct: 281 VLVPRAKSQAGPMSTRLAQHGAIPLEVPTISVEPPRSPAQMERAIKGLVDGRYQWIVFTS 340
Query: 57 SESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNS---INLAK 104
++ + I +G+ +A G N+ L
Sbjct: 341 VNAVKAVWEKLTAIGLDARAFAGVSIATVGKKTAKAVTDLGINPELMPPANARSASGLVD 400
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + D LI+ + + Y + A P +++++
Sbjct: 401 VFPPYDADIDPVNRVFLPRADIATDVLVDGLIDLGWDVDDVVAYRTVRAAPPSADIRHMI 460
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+ F + S+V + C+ A+ V V
Sbjct: 461 KSGGFDAVCFTSSSTVKNLVGIAGKPHQRTIIACIGPMAAATAKECGLRVDVVPEEAGVP 520
Query: 223 SLLKLLPLR 231
L+ L
Sbjct: 521 ELVDALAEH 529
>gi|218692080|ref|YP_002400292.1| uroporphyrinogen-III synthase [Escherichia coli ED1a]
gi|306815159|ref|ZP_07449312.1| uroporphyrinogen-III synthase [Escherichia coli NC101]
gi|218429644|emb|CAR10608.2| uroporphyrinogen III synthase [Escherichia coli ED1a]
gi|305851528|gb|EFM51982.1| uroporphyrinogen-III synthase [Escherichia coli NC101]
Length = 246
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIRDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|302543509|ref|ZP_07295851.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces hygroscopicus ATCC 53653]
gi|302461127|gb|EFL24220.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces himastatinicus ATCC 53653]
Length = 554
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 275 KVLVPRTKEQAASLSDQLRSYGAVPSEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 334
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 335 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAKSLIDFGVKPDLVPSGEQSAAGLLE 394
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 395 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 454
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 455 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVL 514
Query: 223 SLLKLLP 229
L + L
Sbjct: 515 KLAEALA 521
>gi|284992945|ref|YP_003411499.1| Uroporphyrinogen III synthase HEM4 [Geodermatophilus obscurus DSM
43160]
gi|284066190|gb|ADB77128.1| Uroporphyrinogen III synthase HEM4 [Geodermatophilus obscurus DSM
43160]
Length = 516
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 73/249 (29%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +A ++++ G +PV +P R + YG I T
Sbjct: 255 RVLVPRTKDQAGEMSDRLRAYGAVPVEVPTIAVEPPRSPAQMDRAIKGLVTGRYGWIVFT 314
Query: 56 SSESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHG--KDNSINLAK 104
S ++ L A + +GE++A R G + +S L
Sbjct: 315 SVNAVKAVREKFVELGLDARAFAGVKVACVGESTADAVRAFGIVPELVPTGQQSSEGLLA 374
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
E + P ++ L E + + Y + A P ++ +
Sbjct: 375 DFPEYDDVLDPIDRVLLPRADIATETLAAGLKERGWEIDDVTAYRTVRAAPPPAPVREAI 434
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + + A+ V
Sbjct: 435 KGGGFDAVCFTSSSTVRNLVGIAGKPHAKTVVAVIGPQTAATAQEFGLRVDVQPGTAAVG 494
Query: 223 SLLKLLPLR 231
L+ L
Sbjct: 495 PLVDALAEH 503
>gi|331649628|ref|ZP_08350710.1| uroporphyrinogen-III synthase [Escherichia coli M605]
gi|281180852|dbj|BAI57182.1| uroporphyrinogen III synthase [Escherichia coli SE15]
gi|331041498|gb|EGI13646.1| uroporphyrinogen-III synthase [Escherichia coli M605]
Length = 246
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPTYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKCALILRGNGGRELIGDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|323189476|gb|EFZ74756.1| uroporphyrinogen-III synthase [Escherichia coli RN587/1]
Length = 246
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F R+ + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPTYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIRDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|257465834|ref|ZP_05630145.1| uroporphyrinogen-III synthase [Fusobacterium gonidiaformans ATCC
25563]
gi|315916991|ref|ZP_07913231.1| uroporphyrinogen-III synthase [Fusobacterium gonidiaformans ATCC
25563]
gi|313690866|gb|EFS27701.1| uroporphyrinogen-III synthase [Fusobacterium gonidiaformans ATCC
25563]
Length = 492
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 72/236 (30%), Gaps = 10/236 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR IK+A EK+QK G+ P+ PL S Q Y I S +
Sbjct: 251 KILVTRDIKQAPDFSEKLQKHGFFPIEFPLLEIQKHTLSFLKDFFQKYSVILFNSPNGIR 310
Query: 62 TLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
H I +G + +A F K+ ++ + ++
Sbjct: 311 YFLEAIPDLRMIAHCKIGVVGRKTREVAESYKLIPDFMPKEYCVHELAKLSKEYSQEGDH 370
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
++ E Y E+ Y + Y + M+ ++ D I + S
Sbjct: 371 --ILIFTSDISPCDCEKYSKEYNRKYEKFVLYSTSKKEYSKEEMEQKIKEVDIITLLSSS 428
Query: 177 SVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+V + + + + V A L+++L
Sbjct: 429 TVEALYENLEGDLSILEGKQIASIGPVTSKTLRKYGFTVDYEATIYDTNGLVEILK 484
>gi|167761211|ref|ZP_02433338.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704]
gi|167660877|gb|EDS05007.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704]
Length = 803
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 77/248 (31%), Gaps = 19/248 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M +++TRP + A EK++ +G + +P I +E+ L + Y I TS
Sbjct: 556 MRVLVTRPRELASSMAEKLRLLGADVLEVPAIDTIPVKENHRLRQSFEKIEEYDWIVFTS 615
Query: 57 SESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + IGE +A RQKG K ++
Sbjct: 616 QIGVRIFFEEMEKAKVDVRRLHAAKFAVIGEGTARALRQKGIHADLMPKVYDGVSLARLL 675
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+K ++ N L E K + I Y + +K ++
Sbjct: 676 A--GQDIEEKKILVPRAAIANPQLVPILQEAKAMVDDIPIYTTIYQQCKGFDLKEEIEKG 733
Query: 168 DA--ILFYARSSVLYFFSLPL-PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ F + S+V F + C+ A + VA L
Sbjct: 734 KIDCVAFTSSSTVEGFADVSKGADYSKIKAACIGKQTACTAQKYGLDC-YVASKATIDDL 792
Query: 225 LKLLPLRR 232
+ L+ R
Sbjct: 793 ITLIERIR 800
>gi|167630036|ref|YP_001680535.1| uroporphyrinogen iii synthase/methyltransferase [Heliobacterium
modesticaldum Ice1]
gi|167592776|gb|ABZ84524.1| uroporphyrinogen iii synthase/methyltransferase [Heliobacterium
modesticaldum Ice1]
Length = 514
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 69/252 (27%), Gaps = 28/252 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSS 57
IV+TR ++A ++++MG P P + L Y I TS
Sbjct: 258 RIVVTRSRQQASAFAARLEEMGGEPWEFPTIDIQEPEDPAPLEEAIAKVHEYEWIIFTSP 317
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ F + AIG + ++ G F + A+ I+E
Sbjct: 318 NGVQRFFERFFAVGHDIRELCGIRLCAIGPQTRKELQKFGLKTDFVPE---EYRAEAIIE 374
Query: 109 QKVLFTPQ--KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ ++ + L + + Y + ++ +LQ+
Sbjct: 375 GLKNLDDWQGRKVLLPRADIARKILPEALASFGAQVDDVVAYRTVRGGGDAVLLRQMLQD 434
Query: 167 ADAI--LFYARSSVLYFFSLPLPA--------KISAAFLCLSNNIASAIPASYKNVVTVA 216
F + S+ F + + + + V A
Sbjct: 435 KLIHAITFTSSSTARNFVDMLGVEDVAERNALLEGVTMASIGPITSDTMRELGLPVDVEA 494
Query: 217 CFPKETSLLKLL 228
L+K L
Sbjct: 495 TEYTIPGLMKAL 506
>gi|326383044|ref|ZP_08204733.1| uroporphyrin-III C-methyltransferase HemD [Gordonia neofelifaecis
NRRL B-59395]
gi|326198180|gb|EGD55365.1| uroporphyrin-III C-methyltransferase HemD [Gordonia neofelifaecis
NRRL B-59395]
Length = 535
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 72/246 (29%), Gaps = 19/246 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITS 56
+++ R +A+ E++ G IP +P R + Y + TS
Sbjct: 266 VLVPRTKDQAVDMSERLVSHGAIPKEVPTIAVEPPRSPAQMERSVKGLVDGRYQWVVFTS 325
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE +A R G +L ++
Sbjct: 326 TNAVRAVWEKFAEFGLDARAFSGVKIACVGEGTAAKVRSFGVEPELLPTGEQSSLGLLEV 385
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L + + + Y + A P + +++
Sbjct: 386 FPPYDEVFDPVDRILLPRADIATETLSEGLRDRGWEIDDVTAYRTVRAAPPPAETREMIK 445
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 446 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAIEFGLRVDVQPESASIVD 505
Query: 224 LLKLLP 229
L+ L
Sbjct: 506 LVDALA 511
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
I++ R E ++ G+ + + E+ + + A+ TSS
Sbjct: 398 RILLPRADIATETLSEGLRDRGWEIDDVTAYRTVRAAPPPAETREMIKTGGFDAVCFTSS 457
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVLF 113
++ L + + IG +A A + G + + ++L +
Sbjct: 458 STVRNLVGIAGKPHARTIVACIGPKTAETAIEFGLRVDVQPESASIVDLVDALAAHAEQL 517
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 518 RAEGALPPPRKKSRR 532
>gi|50123109|ref|YP_052276.1| uroporphyrinogen-III synthase [Pectobacterium atrosepticum
SCRI1043]
gi|49613635|emb|CAG77086.1| uroporphyrinogen-III synthase [Pectobacterium atrosepticum
SCRI1043]
Length = 246
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 73/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++K+GY PL F RE L + + S
Sbjct: 1 MTILVTRPSPTGEQLVTRLRKLGYHAWHSPLIEFSPGRELAGLPAQLHALHADDLVFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + LA K ++ +
Sbjct: 61 QHAIHYADPMLARTGTSWPAHLAYYAIGRTTALALHKISAHPVTYPPERETSETLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G + LIE + +CY +D+ Y Q
Sbjct: 121 LQDVAGKRALLLRGNGGRELLGETLIERGAQVTYCECYQRRDVHYDGPEQSRHWQQIGID 180
Query: 170 -ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S +A + VA +
Sbjct: 181 KLVITSGEMLQRIYTLVPDYYRASWLLGCQLIVVSERLAEQARQLGWRDIRVADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LVRALQ 246
>gi|256830216|ref|YP_003158944.1| uroporphyrin-III C-methyltransferase [Desulfomicrobium baculatum
DSM 4028]
gi|256579392|gb|ACU90528.1| uroporphyrin-III C-methyltransferase [Desulfomicrobium baculatum
DSM 4028]
Length = 502
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 74/249 (29%), Gaps = 23/249 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSE 58
+V+TR ++A +E ++ +G P + + + Y TS
Sbjct: 255 VVVTRAREQASGLKETLEGLGAACYEFPTITIVPLEDYAPVREAIDRLAGYDWAIFTSVN 314
Query: 59 SLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I AIG A+A ++G F + +
Sbjct: 315 GVRHFWNQLELVGKDARAFGGMQIAAIGPATAEALLERGIRPDFIPPKYVAESVVEGLLE 374
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-- 167
+ + K ++ K + L + + V+ Y + + LL+
Sbjct: 375 RGVAG--KKVLIPRAKVAREVLPEELAKVAAQVDVLPVYETVLTQEDGAEIIELLEKGRL 432
Query: 168 DAILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + S+V FF+L + C+ A + +
Sbjct: 433 HYLTFSSSSTVENFFALVPADSLRPFVGNGLKICCIGPVTARTLSDYGFTPDIMPEDYTI 492
Query: 222 TSLLKLLPL 230
+L++ L
Sbjct: 493 PALVEALVK 501
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/159 (10%), Positives = 42/159 (26%), Gaps = 8/159 (5%)
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
A R+ + + L + + L K ++ + + ++ L
Sbjct: 217 AMAEREGVKSPSMLVVGEVVQLRDTLNWFEKLPLHGKGVVVTRAREQASGLKETLEGLGA 276
Query: 141 PLRVIDCYYSQDIAYPET--TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA----- 193
+ + L D +F + + V +F++ A
Sbjct: 277 ACYEFPTITIVPLEDYAPVREAIDRLAGYDWAIFTSVNGVRHFWNQLELVGKDARAFGGM 336
Query: 194 -FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ A A+ + S+++ L R
Sbjct: 337 QIAAIGPATAEALLERGIRPDFIPPKYVAESVVEGLLER 375
>gi|257452373|ref|ZP_05617672.1| uroporphyrinogen-III synthase [Fusobacterium sp. 3_1_5R]
gi|317058916|ref|ZP_07923401.1| uroporphyrinogen-III synthase [Fusobacterium sp. 3_1_5R]
gi|313684592|gb|EFS21427.1| uroporphyrinogen-III synthase [Fusobacterium sp. 3_1_5R]
Length = 492
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 72/236 (30%), Gaps = 10/236 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR IK+A EK+QK G+ P+ PL S Q Y I S +
Sbjct: 251 KILVTRDIKQAPDFSEKLQKHGFFPIEFPLLEIQKHTLSFLKDFFQKYSVILFNSPNGIR 310
Query: 62 TLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
H I +G + +A F K+ ++ + ++
Sbjct: 311 YFLEAIPDLRMIAHCKIGVVGRKTREVAESYKLIPDFMPKEYCVHELAKLSKEYSQEGDH 370
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
++ E Y E+ Y + Y + M+ ++ D I + S
Sbjct: 371 --ILIFTSDISPCDCEKYSKEYNRKYEKFVLYSTSKKEYSKEEMEQKIKEVDIITLLSSS 428
Query: 177 SVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+V + + + + V A L+++L
Sbjct: 429 TVEALYENLEGDLSILEGKQIASIGPVTSKTLKKYGFTVDYEATIYDTNGLVEILK 484
>gi|121535333|ref|ZP_01667146.1| uroporphyrin-III C-methyltransferase [Thermosinus carboxydivorans
Nor1]
gi|121306119|gb|EAX47048.1| uroporphyrin-III C-methyltransferase [Thermosinus carboxydivorans
Nor1]
Length = 508
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 71/246 (28%), Gaps = 21/246 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TR ++A + +++++G V P + +A +Y + TS
Sbjct: 255 KVLVTRAREQASQLTTRLEELGAQVVEAPAIKIVPPESYEPLDRAIAELATYQWLIFTSV 314
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ A + AIG +A + G
Sbjct: 315 NGVDAFFARLDVAGLDSRALAGVKVAAIGVVTAERLQAHGIRADIVPVQFVAEGVA--SA 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
P ++ + L E ++V+ Y + + L +
Sbjct: 373 LAGEIAPGMRVLIPRALVARDVLPEKLTEMGAQVQVVPAYRTVTGDTDGAVLAEQLAAGE 432
Query: 169 A--ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
I F + S+V SL + A C+ A+ +A +
Sbjct: 433 IDLITFTSSSTVTNLLSLLGSEGVALIGKAKIACIGPITAATCVEQGLTPAIIAKEYTIS 492
Query: 223 SLLKLL 228
L++ +
Sbjct: 493 GLIETI 498
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 31/140 (22%), Gaps = 8/140 (5%)
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ L + K ++ + + L E + E
Sbjct: 235 HVATLRDKLAWFDNKPLFGKKVLVTRAREQASQLTTRLEELGAQVVEAPAIKIVPPESYE 294
Query: 158 --TTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASY 209
L ++F + + V FF+ A + + A + A
Sbjct: 295 PLDRAIAELATYQWLIFTSVNGVDAFFARLDVAGLDSRALAGVKVAAIGVVTAERLQAHG 354
Query: 210 KNVVTVACFPKETSLLKLLP 229
V + L
Sbjct: 355 IRADIVPVQFVAEGVASALA 374
Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 12/127 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITS 56
M ++I R + EK+ +MG ++P + I TS
Sbjct: 381 MRVLIPRALVARDVLPEKLTEMGAQVQVVPAYRTVTGDTDGAVLAEQLAAGEIDLITFTS 440
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHG-KDNSINLAKIIVE 108
S +++ L + I IG +A ++G T + L + I++
Sbjct: 441 SSTVTNLLSLLGSEGVALIGKAKIACIGPITAATCVEQGLTPAIIAKEYTISGLIETILQ 500
Query: 109 QKVLFTP 115
Sbjct: 501 YYRGEYH 507
>gi|114566229|ref|YP_753383.1| hypothetical protein Swol_0687 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337164|gb|ABI68012.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 505
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 77/247 (31%), Gaps = 22/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSS 57
+VITR +A + E+I+ +G + P ++ L Y I TS
Sbjct: 257 RVVITRARAQASQLVERIRDLGGQAIEFPSIKIEKEKNLAALHNAFKNIGQYEWIIFTSI 316
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ A + + AIG A+ +G +D I+ E
Sbjct: 317 NAVDIFFAESRQAGLDIRDLQGIKLGAIGPATRDKLLNRGLRVDVVPEDYRA--EGILKE 374
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--N 166
+ P + ++ + + L + I Y + + + N
Sbjct: 375 LRDRIKPGQWILLPRARGARSILPETLRRWGAHVNEIYLYQAIAASQVSQATLKNIIAGN 434
Query: 167 ADAILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
D + F + S+V F + I C+ A + NV +A
Sbjct: 435 MDYLTFTSSSTVSNFVKIIGAENIAGLKGKVKVACIGPVTADTARENGFNVDILAQEYTI 494
Query: 222 TSLLKLL 228
LL+ +
Sbjct: 495 NGLLEAI 501
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 14/138 (10%), Positives = 36/138 (26%), Gaps = 8/138 (5%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L + + + K ++ + + + + + +
Sbjct: 241 LREELNWLESQPLWGKRVVITRARAQASQLVERIRDLGGQAIEFPSIKIEKEKNLAALHN 300
Query: 162 NLLQ--NADAILFYARSSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVV 213
+ I+F + ++V FF+ A + + + V
Sbjct: 301 AFKNIGQYEWIIFTSINAVDIFFAESRQAGLDIRDLQGIKLGAIGPATRDKLLNRGLRVD 360
Query: 214 TVACFPKETSLLKLLPLR 231
V + +LK L R
Sbjct: 361 VVPEDYRAEGILKELRDR 378
>gi|303247851|ref|ZP_07334119.1| uroporphyrin-III C-methyltransferase [Desulfovibrio fructosovorans
JJ]
gi|302490752|gb|EFL50653.1| uroporphyrin-III C-methyltransferase [Desulfovibrio fructosovorans
JJ]
Length = 509
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 71/244 (29%), Gaps = 21/244 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSE 58
+V+TR ++A + G P ++ + Y + TS
Sbjct: 255 VVVTRSREQASDLTRLLADEGACCYEFPAIEIAPLEDADPVRQAIGRLFDYDWVIFTSVN 314
Query: 59 SLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ A + AIG A+A +G F + +
Sbjct: 315 GVKCFFAEIDTLSLDARVFAGIRVAAIGPATAQALAARGIRPDFVPERFVAESVVAGLLD 374
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + ++ + + L E + V+ Y ++ + + +Q+
Sbjct: 375 QGVVGT--RVLIPRAREAREVLPEKLAEAGAYVDVLAVYDTKPVNQDPAEIVEAMQSGAI 432
Query: 170 --ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V FF+ P + C+ A + VA +
Sbjct: 433 RYVTFTSSSTVRNFFAKVPPEVVKAADDVKLACIGPITAKTLGEFGFTPDIVAEAYTVPA 492
Query: 224 LLKL 227
L K
Sbjct: 493 LAKA 496
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/182 (9%), Positives = 48/182 (26%), Gaps = 8/182 (4%)
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ +L + + + + AR+ ++L + +
Sbjct: 191 DTPAALVRWGTTCHHKSLVATVATMAEEAARKGFAPPSLFVVGGVVSLRDTLGWYEKRPL 250
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILF 172
+ ++ + + L + + + + L + D ++F
Sbjct: 251 LGQGVVVTRSREQASDLTRLLADEGACCYEFPAIEIAPLEDADPVRQAIGRLFDYDWVIF 310
Query: 173 YARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + V FF+ + + A A+ A V S++
Sbjct: 311 TSVNGVKCFFAEIDTLSLDARVFAGIRVAAIGPATAQALAARGIRPDFVPERFVAESVVA 370
Query: 227 LL 228
L
Sbjct: 371 GL 372
Score = 36.3 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 4/72 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
++I R + EK+ + G ++ + + + + TSS
Sbjct: 381 RVLIPRAREAREVLPEKLAEAGAYVDVLAVYDTKPVNQDPAEIVEAMQSGAIRYVTFTSS 440
Query: 58 ESLSTLPANFCR 69
++ A
Sbjct: 441 STVRNFFAKVPP 452
>gi|255764510|ref|YP_003065448.2| uroporphyrinogen-III synthase [Candidatus Liberibacter asiaticus
str. psy62]
gi|254547861|gb|ACT57508.2| uroporphyrinogen-III synthase [Candidatus Liberibacter asiaticus
str. psy62]
Length = 232
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL
Sbjct: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI
Sbjct: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY
Sbjct: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR
Sbjct: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
>gi|291612740|ref|YP_003522897.1| uroporphyrinogen III synthase HEM4 [Sideroxydans lithotrophicus
ES-1]
gi|291582852|gb|ADE10510.1| Uroporphyrinogen III synthase HEM4 [Sideroxydans lithotrophicus
ES-1]
Length = 258
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 38/240 (15%), Positives = 84/240 (35%), Gaps = 18/240 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
IV+TRP ++A +I+++G P++ PL + L A S
Sbjct: 11 IVVTRPREQAAGLVRRIEQLGGKPILFPLLEIESVPDDQGLCEQVARLDQVDMAIFISPN 70
Query: 59 SLSTLPA------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ A I A+G+++A +++G ++ + ++ + ++
Sbjct: 71 AVRFGMAAIKASGRLPASLKIAAVGQSTAEALQEQGVPRVIVPS-ERFDSEGLLAQPELH 129
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
K ++ G D L + + CY + ++ L + AI+
Sbjct: 130 DIAGKRVMIFRGDGGRELLGDTLKARGADVEYVTCYLRSKPGFDAGALRAALPD--AIIV 187
Query: 173 YARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ ++ + + + + + IA A V VA P + L+ L
Sbjct: 188 TSSEALRHLWEMLKEQDRAGLAEVSLVVPHERIAEAARQQGWRHV-VATSPGDDGLISGL 246
>gi|283834567|ref|ZP_06354308.1| uroporphyrinogen-III synthase [Citrobacter youngae ATCC 29220]
gi|291069697|gb|EFE07806.1| uroporphyrinogen-III synthase [Citrobacter youngae ATCC 29220]
Length = 246
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP +++ +G + PL F +E L + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRALGQVAWSFPLIEFSPGQELATLPSRLSALTENDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A + + + LA + H + ++ +
Sbjct: 61 QHAVTFADAELHQQGKSWPSLPRYFAIGRTTALALHTVSSFNIHYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGETLTARGADVDFCECYQRSAKNYAGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|212710181|ref|ZP_03318309.1| hypothetical protein PROVALCAL_01235 [Providencia alcalifaciens DSM
30120]
gi|212687180|gb|EEB46708.1| hypothetical protein PROVALCAL_01235 [Providencia alcalifaciens DSM
30120]
Length = 251
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 69/244 (28%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M +++TRP + I +G PL E L + + S
Sbjct: 1 MKVLVTRPEPSSSALITAINAIGAQAYAAPLITIEAGAELNTLIPRLDGLSKNDLVFLLS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + ++ S Q+ Q H + ++
Sbjct: 61 KNAVWYANLVLQQAGRDWSDKLSYYGIGQSTGHYFQRLTGQTIHWAEAGETSEVLLTHPD 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K I L G L + +CY + + Y +T NAD
Sbjct: 121 LQNLTGKCAILLRGNGGRELLASTLRARGANVDYCECYARRPVPYDKTEFNQTWFNADIT 180
Query: 170 -ILFYARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + L L +S IA S V VA + +L
Sbjct: 181 DIVITSGEMLTLLNDLLSEEMKQWWYSRRLLVVSERIAEKAHQSGWRRVCVATSAENNAL 240
Query: 225 LKLL 228
L+ L
Sbjct: 241 LEAL 244
>gi|315645741|ref|ZP_07898865.1| uroporphyrin-III C-methyltransferase [Paenibacillus vortex V453]
gi|315279219|gb|EFU42529.1| uroporphyrin-III C-methyltransferase [Paenibacillus vortex V453]
Length = 518
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 68/251 (27%), Gaps = 24/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES-------VFLAMQQSYGAIAI 54
I++TR +A +I+ +G P P+ + L +Y +
Sbjct: 255 RILVTRARSQASSLVSQIEDLGGEPYEFPVIETVMPSSDEILAGIQQALDKLPTYDWVFF 314
Query: 55 TSSESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS + + + + A + +I
Sbjct: 315 TSVNGVEFFFRHLKENGRDIRSLAAARIVAVGPATADALGNYGITAEVLKERFQAEGLID 374
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
P + ++ G + L + + + Y + + + LLQ
Sbjct: 375 AYGSELQPGQHVLLPRGDLGRRWLPEKLADMGLHVTEAVTYENVLCGEDDEELLKLLQEG 434
Query: 168 DAI--LFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
F + S+V F L +A C+ A + +V +A
Sbjct: 435 GIHAVTFTSSSTVTNLFQLLKRMGVAHPADLLKQSAIACIGPLTAQTAEEAGLSVSLLAE 494
Query: 218 FPKETSLLKLL 228
SL+ L
Sbjct: 495 EATVDSLVSAL 505
>gi|301062018|ref|ZP_07202729.1| uroporphyrinogen-III C-methyltransferase [delta proteobacterium
NaphS2]
gi|300443869|gb|EFK07923.1| uroporphyrinogen-III C-methyltransferase [delta proteobacterium
NaphS2]
Length = 514
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 78/251 (31%), Gaps = 27/251 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
IV+TR ++A +K+ +G + P + ++ +SY + TS
Sbjct: 261 RIVVTRAREQASGFLKKLSALGAECIQFPTIEIVPPDTFEPLDKAISHLESYQWLLFTSV 320
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + I AIG +A + G T A+ +V+
Sbjct: 321 NGVKYFLRRLYLQGKDVRDLKGIKIGAIGPKTAEQWKNLGITPDLVPD---EYRAEAVVD 377
Query: 109 QKVLFTPQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ P+ ++ D L + + VID Y + ++ +LQ
Sbjct: 378 AFKKWKPKGVRILLPRAAKAREILPDELRKMGARVDVIDAYKTVTPTGDTAEIREMLQRG 437
Query: 168 DA--ILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
+ F + S++ F S+ A C+ +V +
Sbjct: 438 AIDMVTFTSSSTITNFVSMFGSHRQQLTSQWMKEAKVACIGPITGDTAKRQGFSVDLMPQ 497
Query: 218 FPKETSLLKLL 228
+L + +
Sbjct: 498 DYTIEALTRAI 508
>gi|116750622|ref|YP_847309.1| uroporphyrin-III C-methyltransferase [Syntrophobacter fumaroxidans
MPOB]
gi|116699686|gb|ABK18874.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Syntrophobacter fumaroxidans MPOB]
Length = 519
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 65/247 (26%), Gaps = 22/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
IV+TR ++A + + ++G + P L SY TS
Sbjct: 255 RIVVTRAREQASDFKGMLTELGAHCIEFPTIAIEPPPSWRELDEAIRRLASYDWAIFTSV 314
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + AIG +A + G + +
Sbjct: 315 NGVRFFMERLRALGLDVRELKGVRLAAIGPKTAEALEKTGLRVDLVPSEYRAESI--LDS 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
++ + + L + V+ Y + + + A+
Sbjct: 373 LGDADLRERRFLIPRAMVARDILPETLRAKGALVEVVPAYRTVIPRERGPEIAERFRKAE 432
Query: 169 AIL--FYARSSVLYFFSL-----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
F + S+V FFSL LP A C+ A V +
Sbjct: 433 IHCLTFTSSSTVSNFFSLFDRGEILPLLEGVAIACIGPVTAQTAVKHGLKVHIMPAEYTI 492
Query: 222 TSLLKLL 228
L +
Sbjct: 493 PGLANAI 499
>gi|219556338|ref|ZP_03535414.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis T17]
gi|289568435|ref|ZP_06448662.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis T17]
gi|289542189|gb|EFD45837.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis T17]
Length = 565
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 71/248 (28%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + I TS
Sbjct: 298 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWIVFTS 357
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A + +L
Sbjct: 358 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADREAAYYAQRQRPAAGEQSSLGLLDD 417
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P T + +++
Sbjct: 418 FPPYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIK 477
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 478 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGP 537
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 538 LVDALAEH 545
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 430 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIKTGGFDAVCFTSS 489
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVLF 113
++ L + I IG +A A + G L + E
Sbjct: 490 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGPLVDALAEHAARL 549
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 550 RAEGALPPPRKKSRR 564
>gi|242237685|ref|YP_002985866.1| uroporphyrinogen-III synthase [Dickeya dadantii Ech703]
gi|242129742|gb|ACS84044.1| Uroporphyrinogen-III synthase [Dickeya dadantii Ech703]
Length = 246
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++ G+ PL F RE LA Q+ + S
Sbjct: 1 MTILVTRPSPAGEQLVARLRLAGFHAYHSPLIEFSPGRELASLPTRLAALQAGDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ R ++ + LA H ++ +
Sbjct: 61 QHVVEFADPLMSRGGHVWPSSLTYYAVGRTTGLALHTVSGLPVHYPPVRATSETLLQLTE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ + + L G D L E + +CY + Y E + +
Sbjct: 121 LQNIAGRHALLLRGNGGRELLGDTLQERGAIVSYCECYQRTLVHYDGAEQCQRWQTLGVN 180
Query: 169 AILFYARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + L ++ + +S +A A + V VA +
Sbjct: 181 TLVITSGEMLQALHDLVPDVYQANWLLTCRVIVVSERLAEAARKLGWSDVDVADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LMRALQ 246
>gi|308188850|ref|YP_003932981.1| uroporphyrinogen III synthase [Pantoea vagans C9-1]
gi|308059360|gb|ADO11532.1| uroporphyrinogen III synthase [Pantoea vagans C9-1]
Length = 242
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 75/242 (30%), Gaps = 15/242 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP A ++ +G +PL F + LA ++ + I S
Sbjct: 1 MTILVTRPEPAAAELVSRLHALGKQAWSLPLIEFAPGADLDSLPHKLAGLRAGDLVFILS 60
Query: 57 SESLSTLPANFCRHTP---IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + +AIG ++A Q+ ++I +
Sbjct: 61 QQVIHYAQHAIKAWPTELDYYAIGRSTALAFHTVSGQQVTWP-HAHETSEELIRINTLQQ 119
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAIL 171
K + L G P + L + CY Y + + ++
Sbjct: 120 VAGKRALILRGDPGRELLAETLTRRGAEVTFAACYQRCQKHYDGPVEGRRWRDRGVSVLV 179
Query: 172 FYARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + FSL ++ + +S +A+ + VA +LL+
Sbjct: 180 VTSGEMLQQLFSLFPAVDREEWLLNCRLIVVSERLATLAAGLGWQDIQVADGADNDALLR 239
Query: 227 LL 228
L
Sbjct: 240 AL 241
>gi|331699359|ref|YP_004335598.1| uroporphyrinogen-III C-methyltransferase., uroporphyrinogen-III
synthase [Pseudonocardia dioxanivorans CB1190]
gi|326954048|gb|AEA27745.1| Uroporphyrinogen-III C-methyltransferase., Uroporphyrinogen-III
synthase [Pseudonocardia dioxanivorans CB1190]
Length = 513
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 72/251 (28%), Gaps = 23/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +A ++++ G IP +P R + Y + T
Sbjct: 240 RVLVPRTKDQAGAMSDRLRVHGAIPEEVPTIAVEPPRSPTQMERAVKGLVDGRYQWVVFT 299
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN----- 101
S+ ++ + F I +G A+A R G +
Sbjct: 300 STNAVRAVWEKFAEFGLDARAFSGVKIACVGAATAEKVRAFGIVPEIVPDIDEAQQSTSE 359
Query: 102 -LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
L +I + P ++ L + + + Y + A P +
Sbjct: 360 GLLEIFPPYDDILDPVDRVLLPRADIATETLAAGLRDRGWEIDDVTAYRTVRAAPPPAPI 419
Query: 161 KNLLQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
+ ++ DA+ F + S+V + C+ A V
Sbjct: 420 REAIKTGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPATAETAREFGLRVDVQPEE 479
Query: 219 PKETSLLKLLP 229
+ +L+ L
Sbjct: 480 ARVPTLVDALA 490
>gi|297159420|gb|ADI09132.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Streptomyces bingchenggensis BCW-1]
Length = 515
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 77/247 (31%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
++++ R ++A+ ++++ G +P +P R + Y IA T
Sbjct: 236 HVLVPRTKEQAVSLSDQLRSYGAVPSEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 295
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A + G L +
Sbjct: 296 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAKSLIEFGVKPDLVPSGEQSAAGLLE 355
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 356 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 415
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 416 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVH 475
Query: 223 SLLKLLP 229
L + L
Sbjct: 476 KLAEALA 482
>gi|32474591|ref|NP_867585.1| uroporphyrinogen III synthase/methyltransferase [Rhodopirellula
baltica SH 1]
gi|32445130|emb|CAD75132.1| uroporphyrinogen III synthase/methyltransferase [Rhodopirellula
baltica SH 1]
Length = 510
Score = 128 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 25/242 (10%), Positives = 71/242 (29%), Gaps = 17/242 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TRP +A + + ++++G ++ P + + +++ ++ TS
Sbjct: 265 NVLVTRPKDQANQLAKPLEELGANVIVQPAIKICPPDDWSEVDAAIDQIETFDSLVFTSR 324
Query: 58 ESLSTLPANFCRHTPIFAIGE---------ASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + A+A + + + + ++
Sbjct: 325 NGVKSFLDRLLDVGRDMRCLGGLKIAVVGDATANVLATYHLRADWIPESFDAD--ALLTT 382
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ P K + + + D L +R + Y + D+ + + +
Sbjct: 383 LQNAEPPLKSTLVVRTQRGRDVVTDGLRASGTQVREVVAYENWDVPEMDPATRGKIDEQP 442
Query: 169 --AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
I + ++ +S A + V VA SL +
Sbjct: 443 LDWITLTSPATARNVHRWLGDFIGETRIAVISPLTAQTVRELGWRVDAVAASATMQSLTQ 502
Query: 227 LL 228
+
Sbjct: 503 AI 504
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 38/136 (27%), Gaps = 8/136 (5%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT-- 159
LA+ + K ++ K + L E + V
Sbjct: 249 LAESMDWFSRRPLSGKNVLVTRPKDQANQLAKPLEELGANVIVQPAIKICPPDDWSEVDA 308
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVV 213
+ ++ D+++F +R+ V F L + + A+ + +
Sbjct: 309 AIDQIETFDSLVFTSRNGVKSFLDRLLDVGRDMRCLGGLKIAVVGDATANVLATYHLRAD 368
Query: 214 TVACFPKETSLLKLLP 229
+ +LL L
Sbjct: 369 WIPESFDADALLTTLQ 384
>gi|123440581|ref|YP_001004575.1| uroporphyrinogen-III synthase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087542|emb|CAL10323.1| uroporphyrinogen-III synthase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 248
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++ +G + PL F + L Q+ + S
Sbjct: 1 MTILVTRPSPAGEQLVSRLRALGRVAYHAPLIDFSPGDDLPKLPALLQDMQAGDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R+ + + LA ++
Sbjct: 61 QNAVRYANPLLKRNNLSWPAQLSYYAIGRNTALALHTASRLHVTFPPTGETSEMLLSLPD 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L E + +CY I Y E + D
Sbjct: 121 LQQLTGKKALLLRGNGGRELLGESLRERGATVTFCECYQRSPIFYDGSEQSAHWQRSGVD 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S+ +A+ + + VA +
Sbjct: 181 ILVVTSGEMLQQIYTLVPDYYRSSWLLRCRLVVVSDRLAALAAQMGWSNIRVAENADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LIRALQ 246
>gi|300857689|ref|YP_003782672.1| bifunctional uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Corynebacterium pseudotuberculosis FRC41]
gi|300685143|gb|ADK28065.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium pseudotuberculosis FRC41]
gi|302205430|gb|ADL09772.1| Uroporphyrinogen-III methylase [Corynebacterium pseudotuberculosis
C231]
gi|302329984|gb|ADL20178.1| bifunctional uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Corynebacterium pseudotuberculosis 1002]
Length = 562
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A + G IP +P R + Y + T
Sbjct: 289 RVLVPRAKEQAGSMSALLAAQGAIPQEVPTISVEPPRNPAQMEKAVKGIVEGRYQWVIFT 348
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI- 105
S ++ ++ I A+G +A R+ G T N N A +
Sbjct: 349 SVNAVKSVREKIGSFGLDARAFAGVRIGAVGTKTAKAIRELGITPELLPPRNRQNAAGLV 408
Query: 106 --IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
E P ++ + L + + Y + A P ++++
Sbjct: 409 SVFPEYVEDLDPVGRVLLPRADIATDVLVEGLEGLGWEVDDVVAYRTVRAAPPSAEVRDM 468
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+++ DA+ F + S+V + C+ A+A V +
Sbjct: 469 IKSGGFDAVCFTSASTVKNLVGIAGKPHQRTIIACIGPMAAAAAKELGLRVDVIPEVADV 528
Query: 222 TSLLKLLP 229
L+ L
Sbjct: 529 PHLINGLA 536
>gi|254821057|ref|ZP_05226058.1| hypothetical protein MintA_14067 [Mycobacterium intracellulare ATCC
13950]
Length = 536
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +P+ +P R + + + TS
Sbjct: 269 VLVPRTKDQAGEMSERLTSYGALPIEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 328
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 329 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPAGEQSSLGLLDD 388
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 389 FPPYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAETREMIK 448
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 449 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGP 508
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 509 LVDALAEH 516
Score = 38.6 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + E+ + + A+ TSS
Sbjct: 401 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAETREMIKTGGFDAVCFTSS 460
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + I IG +A A + G + ++ L + E
Sbjct: 461 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGPLVDALAEHAARL 520
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 521 RAEGALPPPRKKSRR 535
>gi|308273121|emb|CBX29724.1| hypothetical protein N47_F14190 [uncultured Desulfobacterium sp.]
Length = 354
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 65/247 (26%), Gaps = 22/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
IV+TR ++A + + G + +P + L +Y + TS
Sbjct: 102 RIVVTRAREQASDLVNLLSENGADCIELPAIKVEPPDDWAPLDKAIGNLSTYDWLVFTSV 161
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+S + IG A+ + G K I
Sbjct: 162 NGVSFFFDRLFSKGLDMRSVGNLKTAVIGPATEKRLFEYGIKSDIVPKTYIAESI--IDS 219
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
K + ++ + L + + + Y + + + L N
Sbjct: 220 FKNEELRGQKVLLPRASEARAILPEELFKMGAIVDEVTAYKTSSVCDESINLIEELTNKT 279
Query: 169 A--ILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + S+V F +L I + A V +A
Sbjct: 280 IDMVTFTSSSTVKNFAALLPAGNIGELTKDVVVAAIGPITADTAKNMGIKVGIIANSFTI 339
Query: 222 TSLLKLL 228
L + +
Sbjct: 340 PGLYEAI 346
>gi|118473053|ref|YP_885357.1| uroporphyrinogen-III synthase [Mycobacterium smegmatis str. MC2
155]
gi|118174340|gb|ABK75236.1| uroporphyrinogen-III synthase [Mycobacterium smegmatis str. MC2
155]
Length = 610
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +P+ +P R + + + TS
Sbjct: 343 VLVPRTKDQAGEMSERLVTHGALPIEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 402
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +G+A+A R G +L
Sbjct: 403 TNAVRAVWEKFNEFGLDARAFSGVKIACVGQATADKVRAFGINPELVPSGEQSSLGLLDE 462
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 463 FPPYDEVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAHTREMIK 522
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 523 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAIEFGLRVDVQPETAAVGP 582
Query: 224 LLKLLPLR 231
L++ L
Sbjct: 583 LVEALAEH 590
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 475 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAHTREMIKTGGFDAVCFTSS 534
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + + IG +A A + G + ++ L + + E
Sbjct: 535 STVRNLVGIAGKPHARTIVACIGPKTAETAIEFGLRVDVQPETAAVGPLVEALAEHAARL 594
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 595 RAEGALPPPRKKSRR 609
>gi|240171919|ref|ZP_04750578.1| uroporphyrin-III C-methyltransferase HemD [Mycobacterium kansasii
ATCC 12478]
Length = 557
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + + TS
Sbjct: 290 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 349
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAKI 105
+ ++ + F I +GE++A R G + + L
Sbjct: 350 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPSGEQSSMGLLDE 409
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 410 FPPYDSIFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAATREMIK 469
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 470 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGP 529
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 530 LVDALAEH 537
Score = 38.3 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 422 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAATREMIKTGGFDAVCFTSS 481
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + I IG +A A + G + ++ L + E
Sbjct: 482 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGPLVDALAEHAARL 541
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 542 RAEGALPPPRKKSRR 556
>gi|118465929|ref|YP_883767.1| uroporphyrinogen-III synthase [Mycobacterium avium 104]
gi|118167216|gb|ABK68113.1| uroporphyrinogen-III synthase [Mycobacterium avium 104]
Length = 537
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +P+ +P R + + + TS
Sbjct: 270 VLVPRTKDQAGEMSERLTSYGALPIEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 329
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 330 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPAGEQSSLGLLDD 389
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 390 FPLYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAETREMIK 449
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 450 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGP 509
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 510 LVDALAEH 517
Score = 38.6 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + E+ + + A+ TSS
Sbjct: 402 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAETREMIKTGGFDAVCFTSS 461
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + I IG +A A + G + ++ L + E
Sbjct: 462 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGPLVDALAEHAARL 521
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 522 RAEGALPPPRKKSRR 536
>gi|206579289|ref|YP_002241133.1| uroporphyrinogen-III synthase [Klebsiella pneumoniae 342]
gi|290513168|ref|ZP_06552530.1| uroporphyrinogen-III synthase [Klebsiella sp. 1_1_55]
gi|206568347|gb|ACI10123.1| uroporphyrinogen-III synthase [Klebsiella pneumoniae 342]
gi|289774379|gb|EFD82385.1| uroporphyrinogen-III synthase [Klebsiella sp. 1_1_55]
Length = 246
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 76/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITS 56
M I++TRP+ + +++ MG + PL F RE LA S + S
Sbjct: 1 MSILVTRPLPQGEALVSRLRAMGRVAWSFPLIEFTPGRELPVLGDHLAHLGSDDLLFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ A +P + + LA Q + ++ +
Sbjct: 61 QHAVEFAHARLQQQGLPWPTSPHYFAIGRTTALALHTVSGQHIRYPLDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G L E + +CY Y E M+ +
Sbjct: 121 LQNIAGKNALILRGNGGRELLGATLAERGARVTFCECYQRSAKHYDGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + + +S +A + VA +
Sbjct: 181 TLVVTSGEMLQQLWSLIPQWYREQWLLHCRLVVVSERLALQARELGWQEIQVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|94986562|ref|YP_594495.1| siroheme synthase [Lawsonia intracellularis PHE/MN1-00]
gi|94730811|emb|CAJ54173.1| Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)
[Lawsonia intracellularis PHE/MN1-00]
Length = 503
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 78/247 (31%), Gaps = 23/247 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
IV+TR ++A + ++G + P E+ + + Y I TS
Sbjct: 255 IVVTRAREQASSLARLLTELGAEVIQFPTIDITPVTETATIDQYVHKIKEYDWIIFTSVN 314
Query: 59 SLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I AIG A+A R+KG F + +A+ I +
Sbjct: 315 GVRFFWERLIAFKLDARVFAGVSIVAIGPATAEAIREKGIQPDFVPE---EYIAESIADG 371
Query: 110 KVLFT-PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
V K ++ + + L E + ++ Y ++ + + LL+
Sbjct: 372 LVKLGVKGKRILLPRAQEAREVLPNKLREAGATVDIVPVYETRLAIKLQDNILQLLEQGT 431
Query: 168 -DAILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D I F + S+V FF + F + ++ +
Sbjct: 432 LDCITFASSSTVENFFEHIPITVLKKYRLPKFATIGPVTSNTLKKYGFEYDIQPTKYTIP 491
Query: 223 SLLKLLP 229
L+ +
Sbjct: 492 DLVNAIA 498
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 35/122 (28%), Gaps = 8/122 (6%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILFYA 174
K ++ + + L E + + + ++ D I+F +
Sbjct: 253 KSIVVTRAREQASSLARLLTELGAEVIQFPTIDITPVTETATIDQYVHKIKEYDWIIFTS 312
Query: 175 RSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ V +F+ + K+ A + + A AI V S+ L
Sbjct: 313 VNGVRFFWERLIAFKLDARVFAGVSIVAIGPATAEAIREKGIQPDFVPEEYIAESIADGL 372
Query: 229 PL 230
Sbjct: 373 VK 374
Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPL----SYFIHDRESVFLAMQQSYGAIAITSS 57
I++ R + K+++ G ++P+ + L Q + I SS
Sbjct: 381 RILLPRAQEAREVLPNKLREAGATVDIVPVYETRLAIKLQDNILQLLEQGTLDCITFASS 440
Query: 58 ESLSTLPANFC 68
++ +
Sbjct: 441 STVENFFEHIP 451
>gi|41410102|ref|NP_962938.1| hypothetical protein MAP4004 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398935|gb|AAS06554.1| CysG [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 552
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +P+ +P R + + + TS
Sbjct: 285 VLVPRTKDQAGEMSERLTSYGALPIEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 344
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 345 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPAGEQSSLGLLDD 404
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 405 FPPYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAETREMIK 464
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 465 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGP 524
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 525 LVDALAEH 532
Score = 38.6 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + E+ + + A+ TSS
Sbjct: 417 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAETREMIKTGGFDAVCFTSS 476
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + I IG +A A + G + ++ L + E
Sbjct: 477 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGPLVDALAEHAARL 536
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 537 RAEGALPPPRKKSRR 551
>gi|327541281|gb|EGF27824.1| uroporphyrinogen III synthase/methyltransferase [Rhodopirellula
baltica WH47]
Length = 510
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 25/242 (10%), Positives = 73/242 (30%), Gaps = 17/242 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TRP +A + + ++++G ++ P + + +++ ++ TS
Sbjct: 265 NVLVTRPKDQADQLAKPLEELGANVIVQPAIKICAPDDWSEVDAAIDQIETFDSLVFTSR 324
Query: 58 ESLSTLPANFCRHTPIFAIGE---------ASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + A+A + + + + ++
Sbjct: 325 NGVKSFLDRLLEVGRDMRCLGGLKIAVVGDATAKVLATYHLRADWIPESFDAD--ALLTT 382
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ P K + + + D L +R + Y ++D+ + + +
Sbjct: 383 LQNAEPPLKSTLVVRTQRGRDVITDGLRASGTQVREVVTYENRDVPEMDPATRGKIDEQP 442
Query: 169 --AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
I + ++ + +S A + V VA SL +
Sbjct: 443 LDWITLTSPATARNVHRWLGDSIGETRIAVISPLTAQTVRELGWRVDAVAASATMQSLTQ 502
Query: 227 LL 228
+
Sbjct: 503 AI 504
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 37/136 (27%), Gaps = 8/136 (5%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT-- 159
LA+ + K ++ K + L E + V
Sbjct: 249 LAESMDWFSRRPLSGKNVLVTRPKDQADQLAKPLEELGANVIVQPAIKICAPDDWSEVDA 308
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVV 213
+ ++ D+++F +R+ V F L + + A + +
Sbjct: 309 AIDQIETFDSLVFTSRNGVKSFLDRLLEVGRDMRCLGGLKIAVVGDATAKVLATYHLRAD 368
Query: 214 TVACFPKETSLLKLLP 229
+ +LL L
Sbjct: 369 WIPESFDADALLTTLQ 384
>gi|268592916|ref|ZP_06127137.1| uroporphyrinogen-III synthase [Providencia rettgeri DSM 1131]
gi|291311708|gb|EFE52161.1| uroporphyrinogen-III synthase [Providencia rettgeri DSM 1131]
Length = 251
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 62/244 (25%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M +++TRP I G PL E L + + + S
Sbjct: 1 MKVLVTRPELACSELITAITTKGGEAFASPLIRIGPGAELNTLIPQLDSLTANDLVFLLS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + ++ S Q+ + + ++ +
Sbjct: 61 KNAVEYANLTLEQMGRSWSDKLSYYGIGRSTGQYFQQVTGKDIRWAEQGETSEILLTHPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ F K + L G L + +CY + Y +
Sbjct: 121 LQFLEGKNALLLRGNGGRELLASTLRARGAQVSYCECYTRYPVDYDKALFNQQWFQTGIT 180
Query: 171 --LFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + + L S L +S IA V VA +L
Sbjct: 181 DVVITSGQMLALLEELITEEYQTWWFSRRLLVVSERIADQARRGGWQKVCVANSADNNAL 240
Query: 225 LKLL 228
L+ L
Sbjct: 241 LEAL 244
>gi|261405371|ref|YP_003241612.1| uroporphyrin-III C-methyltransferase [Paenibacillus sp. Y412MC10]
gi|261281834|gb|ACX63805.1| uroporphyrin-III C-methyltransferase [Paenibacillus sp. Y412MC10]
Length = 519
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 71/251 (28%), Gaps = 24/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-------SVFLAMQQSYGAIAI 54
I++TR +A +I+++G P P+ + + L +Y +
Sbjct: 255 RILVTRARSQASSLVSQIEELGGEPYEFPVIETVMPSKGEGLAGIQEALDKLGTYDWVFF 314
Query: 55 TSSESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS + + H + A + +I
Sbjct: 315 TSVNGVEFFFRHLKEHGRDIRSLASARIVAVGPATADALGNYGISAELIKERYQAEGLID 374
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
P + ++ G + L+E + + Y + + + LLQ+
Sbjct: 375 AYGPELQPGQRVLLPRGDLARRWLPEKLMEMGLHVTEAVIYENVLCGEDDDELLKLLQDG 434
Query: 168 DAI--LFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
F + S+V + + C+ A + +V +A
Sbjct: 435 GIHAVTFTSSSTVTNLLKVLKGMGVAEPADLLKESTIACIGPLTAQTAEKAGLHVSLLAE 494
Query: 218 FPKETSLLKLL 228
SL+K L
Sbjct: 495 EATVDSLVKAL 505
>gi|304398147|ref|ZP_07380022.1| Uroporphyrinogen-III synthase [Pantoea sp. aB]
gi|304354433|gb|EFM18805.1| Uroporphyrinogen-III synthase [Pantoea sp. aB]
Length = 242
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 72/242 (29%), Gaps = 15/242 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP A ++ +G +PL F + L + + I S
Sbjct: 1 MTILVTRPEPAAAELVSRLHALGKQAWSLPLIEFAPGADLASLPQKLAGLHAGDLVFILS 60
Query: 57 SESLSTLPANFCRHTP---IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + +AIG ++A Q+ ++I +
Sbjct: 61 QQVIHYAQHAIKAWPTELDYYAIGRSTALAFHTVSGQQVTWP-HAHETSEELIQINTLQQ 119
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAIL 171
K + L G P + L + CY Y + + ++
Sbjct: 120 ISGKRALILRGDPGRELLAETLTRRGAEVTFAACYQRCQKHYDGPVEGRRWRDRGVSVLV 179
Query: 172 FYARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + FSL + + +S +A+ + VA +LL+
Sbjct: 180 VTSGEMLQQLFSLFPAVDREEWLLHCRLIVVSERLATLAAGLGWQDIQVADGADNDALLR 239
Query: 227 LL 228
L
Sbjct: 240 AL 241
>gi|237727920|ref|ZP_04558401.1| uroporphyrinogen-III synthase [Citrobacter sp. 30_2]
gi|226910369|gb|EEH96287.1| uroporphyrinogen-III synthase [Citrobacter sp. 30_2]
Length = 246
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 73/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F RE L+ + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWSFPLIEFSPGRELATVASRLSALTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A + + + LA H + ++ +
Sbjct: 61 QHAVTFADAELRQQEKSWPSLPRYFAIGRTTALALHTVSGFNIHYPLDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGETLTARGADVDFCECYQRSAKHYDGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|317046389|ref|YP_004114037.1| Uroporphyrinogen-III synthase [Pantoea sp. At-9b]
gi|316948006|gb|ADU67481.1| Uroporphyrinogen-III synthase [Pantoea sp. At-9b]
Length = 246
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 82/245 (33%), Gaps = 17/245 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP A +++ G + ++PL F R+ LA Q + + S
Sbjct: 1 MTILVTRPEPAASELVARLRTQGKLAWILPLIEFTPGRDIVHLPQQLAALQPGDLVFLLS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ ++ R + S LA +++ +
Sbjct: 61 QQVVTFAHPELQRQGFAWPTQLDYYAIGRSTALALHTVSNLKVDYPHARETSEELVRLNR 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G P D L E + +R +CY + AY + +
Sbjct: 121 LQQVSGKRALILRGSPGRELLADTLTERGVDVRYAECYQRCEKAYDGATEGRRWRDRGIT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + F+L P + + +S +A+ + + VA +
Sbjct: 181 TLVVTSGEMLQQLFALFPPIDRREWLLHCRLVVVSERLATLAASLGWQDIDVADGADNDA 240
Query: 224 LLKLL 228
LL+ L
Sbjct: 241 LLRAL 245
>gi|74314315|ref|YP_312734.1| uroporphyrinogen-III synthase [Shigella sonnei Ss046]
gi|73857792|gb|AAZ90499.1| uroporphyrinogen III synthase [Shigella sonnei Ss046]
Length = 246
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F + + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEA------SACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPNYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNAANDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|41676|emb|CAA68776.1| unnamed protein product [Escherichia coli K-12]
Length = 246
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP +++ +G + PL F + + LA + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + + LA Q + ++ +
Sbjct: 61 QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +CY I Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNRDNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|251787829|ref|YP_003002550.1| uroporphyrinogen-III synthase [Dickeya zeae Ech1591]
gi|247536450|gb|ACT05071.1| Uroporphyrinogen-III synthase [Dickeya zeae Ech1591]
Length = 246
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 70/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++ G PL F E L + + S
Sbjct: 1 MTILVTRPSPAGEQLVARLRMAGLPAYHSPLIEFSPGDELPQLPAMLQALRPGDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF------HGKDNSINLAKIIVEQK 110
+ + R + + R G H ++ +
Sbjct: 61 QQVVEYADPALSRAGMRWPESLTYFAVGRSTGLALHTVSGLPVHYPPERATSETLLQSPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +R +CY + Y E + D
Sbjct: 121 LQQVTGKQALLLRGNGGRELLGETLQQRGAQVRYCECYQRNPVVYDGAEQCQRWQRLGID 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + F++L + +S +A + +A +
Sbjct: 181 TLVITSGEMLQQFYTLVPDYYRTTWLTGCRVVVVSERLAGVARELGWRDILIADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LMRALQ 246
>gi|288937773|ref|YP_003441832.1| uroporphyrinogen III synthase HEM4 [Klebsiella variicola At-22]
gi|288892482|gb|ADC60800.1| Uroporphyrinogen III synthase HEM4 [Klebsiella variicola At-22]
Length = 246
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 76/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITS 56
M I++TRP+ + +++ MG + PL F RE LA S + S
Sbjct: 1 MSILVTRPLPQGEALVSRLRAMGRVAWSFPLIEFTPGRELPVLGDHLAHLGSDDLLFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ A +P + + LA Q + ++ +
Sbjct: 61 QHAVEFAHARLQQQGLPWPTSPHYFAIGRTTALALHTVSGQHIRYPLDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G L E + +CY Y E M+ +
Sbjct: 121 LQNIAGKNALILRGNGGRELLGATLAERGARVTFCECYQRSAKHYDGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + + +S +A + VA +
Sbjct: 181 TLVVTSGEMLQQLWSLIPQWYREQWLLHCRVVVVSERLALQARELGWQEIQVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|219669372|ref|YP_002459807.1| uroporphyrin-III C-methyltransferase [Desulfitobacterium hafniense
DCB-2]
gi|219539632|gb|ACL21371.1| uroporphyrin-III C-methyltransferase [Desulfitobacterium hafniense
DCB-2]
Length = 504
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 71/247 (28%), Gaps = 20/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
I++TR +A + I+ +G P P + R+ L + + + TS
Sbjct: 256 RIIVTRARHQASALSQGIEDLGGEPWEFPAIEIVPPRDPQPLIQAIKNLKRFEWLIFTSV 315
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + AIG A+ ++ F ++ KII
Sbjct: 316 NGVEEFFKVLMEQGRDVRDLAGMDVVAIGPATRDALEKRCLKVSFVPEEYRA--EKIIEG 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
P + ++ + + L + + Y + + + LL+
Sbjct: 374 LASRVLPGQSVLLARAEEARDILPESLKALGADVWDVPTYRTVLGNANKEELMKLLEEKA 433
Query: 169 A--ILFYARSSVLYFFSLP---LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V F L + + ++ A
Sbjct: 434 VAAVTFTSSSTVRNFLQLIDGRQSLLDGVKLYSIGPITSKTAQEFGLSIYREAKQYTIKG 493
Query: 224 LLKLLPL 230
LL+ L
Sbjct: 494 LLETLAR 500
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 40/139 (28%), Gaps = 8/139 (5%)
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
L + + + + +I + + + + P+ +
Sbjct: 239 QLREKLQWFEKRPLFGQRIIVTRARHQASALSQGIEDLGGEPWEFPAIEIVPPRDPQPLI 298
Query: 161 KN--LLQNADAILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNV 212
+ L+ + ++F + + V FF + + + + A+ V
Sbjct: 299 QAIKNLKRFEWLIFTSVNGVEEFFKVLMEQGRDVRDLAGMDVVAIGPATRDALEKRCLKV 358
Query: 213 VTVACFPKETSLLKLLPLR 231
V + +++ L R
Sbjct: 359 SFVPEEYRAEKIIEGLASR 377
>gi|134103371|ref|YP_001109032.1| uroporphyrinogen III synthase/methyltransferase [Saccharopolyspora
erythraea NRRL 2338]
gi|133915994|emb|CAM06107.1| uroporphyrinogen III synthase/methyltransferase [Saccharopolyspora
erythraea NRRL 2338]
Length = 510
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 72/249 (28%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A E++ G + +P R + Y + T
Sbjct: 240 KVLVPRTKEQAGSMSERLWSHGAVSHEVPTISVEPPRSPAQMERAVKGLVDGRYQWVVFT 299
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + F I +GEA+A R G + L +
Sbjct: 300 STNAVRAVWEKFREFGLDARAFSGVKIACVGEATAEKVRSFGINPELVPSGEQSSEGLLQ 359
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + + Y + A P + ++
Sbjct: 360 DFPPHDDILDPVDRVLLPRADIATETLAAGLRERGWEIDDVTAYRTVRAAPPPAETREMI 419
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ + A V P+
Sbjct: 420 KTGGFDAVCFTSASTVRNLVGIAGKPHARTLVACIGPSTAETAKEFGLRVDVQPEVPQIP 479
Query: 223 SLLKLLPLR 231
L+ L
Sbjct: 480 VLVDALAEH 488
>gi|227832130|ref|YP_002833837.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium aurimucosum ATCC 700975]
gi|227453146|gb|ACP31899.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium aurimucosum ATCC 700975]
Length = 584
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 75/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y + T
Sbjct: 311 RVLVPRTKEQAAAMSARLASHGAIPQSVPTISVEPPRNPAQMDRAIKGIVEGRYKWVVFT 370
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGK---DNSINLA 103
S ++S + + A+G+ +A R KG N+ L
Sbjct: 371 SVNAVSAVWKKIAELGLDARDFAGVHLAAVGQKTADAIRAKGMVPELLPPATKQNAEGLV 430
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ ++ L++ + + Y + A P ++++
Sbjct: 431 EVFPNYVEDIDAVGRVLLPRADIAGEALVTGLLDLGWEVDDVVAYRTVRAAPPAAEIRDM 490
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ + +A V V
Sbjct: 491 IKTGGFDAVAFTSPSTVRNLVGIAGKPHARTIIACIGPSTKAAAEEVGLRVDVVPEVADV 550
Query: 222 TSLLKLLPLR 231
L+ L
Sbjct: 551 PMLVDALAEH 560
>gi|167463590|ref|ZP_02328679.1| uroporphyrin-III C-methyltransferase [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322383220|ref|ZP_08057031.1| uroporphyrin-III C-methyltransferase-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321152489|gb|EFX45275.1| uroporphyrin-III C-methyltransferase-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 516
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 78/254 (30%), Gaps = 28/254 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS-------YGAIAI 54
I++TR +A KI+ +G PV P+ + + Y I
Sbjct: 256 RILVTRARSQASELAAKIEDLGGEPVEFPVISLREPSRPEAIRALEQAVSCLELYNWILF 315
Query: 55 TSSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
TS + +H I A+G A+A R +G F ++ +
Sbjct: 316 TSVNGVDFFFEYLTKHHIDIRRLYGAKIAAVGPATADALRNRGLIPDFIPREFVA--EGL 373
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + ++ E+ + + +D Y + + LL+
Sbjct: 374 LAGLEEHIRSGQHVLLPTANIARKLLEENFSRRGVHVTKVDVYENVLSTEGVEEVLELLR 433
Query: 166 NA--DAILFYARSSVLYFFSLPLPAK--------ISAAFLCLSNNIASAIPASYKNVVTV 215
+ A+ F + S+V A +C+ A + + +
Sbjct: 434 DGALHAVTFTSSSTVNNLLEALRQAGAVNPQELLAPLELVCIGPKTAETLHKNGFSRYRT 493
Query: 216 ACFPKETSLLKLLP 229
A SL++ L
Sbjct: 494 AAEATIDSLVEALQ 507
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/188 (9%), Positives = 44/188 (23%), Gaps = 11/188 (5%)
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ ++ + + T + S + + L + +
Sbjct: 193 DTPAAIICMGTWMEQETITGTLRTISGKALEANFTSPAVIIIGEVVRLRDKLSWFEQKPL 252
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIP-LRVIDCYYSQDIAYPE----TTMKNLLQNADA 169
K ++ + + + + + + + L+ +
Sbjct: 253 FGKRILVTRARSQASELAAKIEDLGGEPVEFPVISLREPSRPEAIRALEQAVSCLELYNW 312
Query: 170 ILFYARSSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVVTVACFPKETS 223
ILF + + V +FF I + A A+ +
Sbjct: 313 ILFTSVNGVDFFFEYLTKHHIDIRRLYGAKIAAVGPATADALRNRGLIPDFIPREFVAEG 372
Query: 224 LLKLLPLR 231
LL L
Sbjct: 373 LLAGLEEH 380
>gi|145220671|ref|YP_001131349.1| uroporphyrinogen III synthase HEM4 [Mycobacterium gilvum PYR-GCK]
gi|315442378|ref|YP_004075257.1| uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III
synthase [Mycobacterium sp. Spyr1]
gi|145213157|gb|ABP42561.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Mycobacterium gilvum PYR-GCK]
gi|315260681|gb|ADT97422.1| uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III
synthase [Mycobacterium sp. Spyr1]
Length = 569
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A +++ G +P+ +P R + + + TS
Sbjct: 302 VLVPRTKDQAGEMSDRLVGHGALPIEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 361
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +G+A+A R G +L
Sbjct: 362 TNAVRAVWEKFNEFGLDARAFSGVKIACVGQATAEKVRAFGINPELVPTGEQSSLGLLDE 421
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 422 FPPYDDIFDPVNRVLLPRADIATETLAEGLRELGWEIEDVTAYRTVRAAPPPAHTREMIK 481
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 482 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAAEFGLRVDVQPEVAAVGP 541
Query: 224 LLKLLPLR 231
L++ L
Sbjct: 542 LVEALAEH 549
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E ++++G+ + + + + + A+ TSS
Sbjct: 434 RVLLPRADIATETLAEGLRELGWEIEDVTAYRTVRAAPPPAHTREMIKTGGFDAVCFTSS 493
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + + IG +A A + G + ++ L + + E
Sbjct: 494 STVRNLVGIAGKPHARTIVACIGPKTAETAAEFGLRVDVQPEVAAVGPLVEALAEHAARL 553
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 554 RAEGALPPPRKKSRR 568
>gi|329928498|ref|ZP_08282366.1| uroporphyrinogen-III C-methyltransferase [Paenibacillus sp. HGF5]
gi|328937757|gb|EGG34165.1| uroporphyrinogen-III C-methyltransferase [Paenibacillus sp. HGF5]
Length = 519
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 71/251 (28%), Gaps = 24/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-------SVFLAMQQSYGAIAI 54
I++TR +A +I+++G P P+ + + L +Y +
Sbjct: 255 RILVTRARSQASSLVSQIEELGGEPYEFPVIETVMPSKGEGLAGIREALDKLGTYDWVFF 314
Query: 55 TSSESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS + + H + A + +I
Sbjct: 315 TSVNGVEFFFRHLKEHGRDIRSLASARIVAVGPATADALGNYGISAEVIKERYQAEGLID 374
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
P + ++ G + L+E + + Y + + + LLQ+
Sbjct: 375 AYGPELQPGQRVLLPRGDLARRWLPEKLMEMGLHVTEAVIYENVLCGEDDDELLKLLQDG 434
Query: 168 DAI--LFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
F + S+V + + C+ A + +V +A
Sbjct: 435 GIHAVTFTSSSTVTNLLKVLKGMGVAEPAHLLKESTIACIGPLTAQTAEEAGLHVSLLAE 494
Query: 218 FPKETSLLKLL 228
SL+K L
Sbjct: 495 EATVDSLVKAL 505
>gi|308275668|gb|ADO25567.1| bifunctional uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Corynebacterium pseudotuberculosis I19]
Length = 550
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A + G IP +P R + Y + T
Sbjct: 289 RVLVPRAKEQAGSMSALLAAQGAIPQEVPTISVEPPRNPAQMEKAVKGIVEGRYQWVIFT 348
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI- 105
S ++ ++ I A+G +A R+ G T N N A +
Sbjct: 349 SVNAVKSVREKIGSFGLDARAFAGVRIGAVGTKTAKAIRELGITPELLPPRNRQNAAGLV 408
Query: 106 --IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
E P ++ + L + + Y + A P ++++
Sbjct: 409 SVFPEYVEDLDPVGRVLLPRADIATDVLVEGLEGLGWEVDDVVAYRTVRAAPPSAEVRDM 468
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+++ DA+ F + S+V + C+ A+A V +
Sbjct: 469 IKSGGFDAVCFTSASTVKNLVGIAGKPHQRTIIACIGPMAAAAAKELGLRVDVIPEVADV 528
Query: 222 TSLLKLLP 229
L+ L
Sbjct: 529 PHLINGLA 536
>gi|31791693|ref|NP_854186.1| uroporphyrin-III C-methyltransferase HemD [Mycobacterium bovis
AF2122/97]
gi|57116747|ref|YP_177733.1| uroporphyrin-III C-methyltransferase HemD [Mycobacterium
tuberculosis H37Rv]
gi|121636429|ref|YP_976652.1| putative uroporphyrin-III c-methyltransferase hemD [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148660280|ref|YP_001281803.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis H37Ra]
gi|148821713|ref|YP_001286467.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis F11]
gi|215402276|ref|ZP_03414457.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis 02_1987]
gi|215410035|ref|ZP_03418843.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis 94_M4241A]
gi|215425742|ref|ZP_03423661.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis T92]
gi|215429336|ref|ZP_03427255.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis EAS054]
gi|218752148|ref|ZP_03530944.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis GM 1503]
gi|224988901|ref|YP_002643588.1| putative uroporphyrin-III C-methyltransferase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|254363473|ref|ZP_04979519.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis str. Haarlem]
gi|254549462|ref|ZP_05139909.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|260185383|ref|ZP_05762857.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis CPHL_A]
gi|260203667|ref|ZP_05771158.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis K85]
gi|289441897|ref|ZP_06431641.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis T46]
gi|289446057|ref|ZP_06435801.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis CPHL_A]
gi|289552765|ref|ZP_06441975.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis KZN 605]
gi|289573101|ref|ZP_06453328.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis K85]
gi|289744221|ref|ZP_06503599.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis 02_1987]
gi|289749006|ref|ZP_06508384.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis T92]
gi|289752546|ref|ZP_06511924.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis EAS054]
gi|289756588|ref|ZP_06515966.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis T85]
gi|289760633|ref|ZP_06520011.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis GM 1503]
gi|297632999|ref|ZP_06950779.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis KZN 4207]
gi|298523992|ref|ZP_07011401.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis 94_M4241A]
gi|306779363|ref|ZP_07417700.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu002]
gi|306806324|ref|ZP_07442992.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu007]
gi|307078440|ref|ZP_07487610.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu011]
gi|308377444|ref|ZP_07479183.2| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu009]
gi|313657303|ref|ZP_07814183.1| uroporphyrin-III C-methyltransferase HemD [Mycobacterium
tuberculosis KZN V2475]
gi|31617279|emb|CAD93386.1| PROBABLE UROPORPHYRIN-III C-METHYLTRANSFERASE HEMD
(UROPORPHYRINOGEN III METHYLASE) (UROGEN III METHYLASE)
(SUMT) (UROGEN III METHYLASE) (UROM) [Mycobacterium
bovis AF2122/97]
gi|38490198|emb|CAE55293.1| PROBABLE UROPORPHYRIN-III C-METHYLTRANSFERASE HEMD
(UROPORPHYRINOGEN III METHYLASE) (UROGEN III METHYLASE)
(SUMT) (UROGEN III METHYLASE) (UROM) [Mycobacterium
tuberculosis H37Rv]
gi|121492076|emb|CAL70539.1| Probable uroporphyrin-III c-methyltransferase hemD [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|134148987|gb|EBA41032.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis str. Haarlem]
gi|148504432|gb|ABQ72241.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis H37Ra]
gi|148720240|gb|ABR04865.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis F11]
gi|224772014|dbj|BAH24820.1| putative uroporphyrin-III C-methyltransferase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|289414816|gb|EFD12056.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis T46]
gi|289419015|gb|EFD16216.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis CPHL_A]
gi|289437397|gb|EFD19890.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis KZN 605]
gi|289537532|gb|EFD42110.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis K85]
gi|289684749|gb|EFD52237.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis 02_1987]
gi|289689593|gb|EFD57022.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis T92]
gi|289693133|gb|EFD60562.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis EAS054]
gi|289708139|gb|EFD72155.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis GM 1503]
gi|289712152|gb|EFD76164.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis T85]
gi|298493786|gb|EFI29080.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis 94_M4241A]
gi|308327690|gb|EFP16541.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu002]
gi|308347204|gb|EFP36055.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu007]
gi|308355776|gb|EFP44627.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu009]
gi|308363638|gb|EFP52489.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu011]
gi|326902340|gb|EGE49273.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis W-148]
gi|328457229|gb|AEB02652.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis KZN 4207]
Length = 565
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + I TS
Sbjct: 298 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWIVFTS 357
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 358 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPSGEQSSLGLLDD 417
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P T + +++
Sbjct: 418 FPPYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIK 477
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 478 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGP 537
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 538 LVDALAEH 545
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 430 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIKTGGFDAVCFTSS 489
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVLF 113
++ L + I IG +A A + G L + E
Sbjct: 490 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGPLVDALAEHAARL 549
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 550 RAEGALPPPRKKSRR 564
>gi|227505108|ref|ZP_03935157.1| uroporphyrinogen-III synthase [Corynebacterium striatum ATCC 6940]
gi|227198311|gb|EEI78359.1| uroporphyrinogen-III synthase [Corynebacterium striatum ATCC 6940]
Length = 559
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/250 (14%), Positives = 76/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y I T
Sbjct: 283 RVLVPRTKEQAAAMSARLAGYGAIPQSVPTISVEPPRNPAQMDRAIKGIVEGRYKWIVFT 342
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGK---DNSINLA 103
S ++S + + A+G +A R KG N+ L
Sbjct: 343 SVNAVSAVWEKIADLGLDARDFAGVHLAAVGSKTADAIRAKGMVPELLPNKRKQNAEGLV 402
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ ++ L E + + Y + A P ++++
Sbjct: 403 EVFPNYVEDIDAVGRVLLPRADIAGDALVTGLEELGWEVDDVVAYRTVRAAPPAAEVRDM 462
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+++ DA+ F + S+V + C+ + +A V V +
Sbjct: 463 IKSGGFDAVAFTSGSTVRNLVGIAGKPHARTIIACIGPSTKAAAEELGLRVDVVPEVAEV 522
Query: 222 TSLLKLLPLR 231
+L+ L
Sbjct: 523 PALIDALAEH 532
>gi|308231571|ref|ZP_07412949.2| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu001]
gi|308395587|ref|ZP_07492112.2| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu012]
gi|308216829|gb|EFO76228.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu001]
gi|308367293|gb|EFP56144.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu012]
Length = 551
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + I TS
Sbjct: 284 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWIVFTS 343
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 344 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPSGEQSSLGLLDD 403
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P T + +++
Sbjct: 404 FPPYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIK 463
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 464 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGP 523
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 524 LVDALAEH 531
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 416 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIKTGGFDAVCFTSS 475
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVLF 113
++ L + I IG +A A + G L + E
Sbjct: 476 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGPLVDALAEHAARL 535
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 536 RAEGALPPPRKKSRR 550
>gi|15839904|ref|NP_334941.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis CDC1551]
gi|253797443|ref|YP_003030444.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis KZN 1435]
gi|254230858|ref|ZP_04924185.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis C]
gi|308370432|ref|ZP_07421472.2| putative tetrapyrrole (Corrin/Porphyrin) methylase [Mycobacterium
tuberculosis SUMu003]
gi|308371691|ref|ZP_07425841.2| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu004]
gi|308376422|ref|ZP_07438781.2| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu008]
gi|308378657|ref|ZP_07483378.2| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu010]
gi|13880041|gb|AAK44755.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis CDC1551]
gi|124599917|gb|EAY58927.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis C]
gi|253318946|gb|ACT23549.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis KZN 1435]
gi|308332041|gb|EFP20892.1| putative tetrapyrrole (Corrin/Porphyrin) methylase [Mycobacterium
tuberculosis SUMu003]
gi|308335828|gb|EFP24679.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu004]
gi|308351145|gb|EFP39996.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu008]
gi|308359836|gb|EFP48687.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu010]
gi|323721188|gb|EGB30250.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis CDC1551A]
Length = 568
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + I TS
Sbjct: 301 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWIVFTS 360
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 361 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPSGEQSSLGLLDD 420
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P T + +++
Sbjct: 421 FPPYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIK 480
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 481 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGP 540
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 541 LVDALAEH 548
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 433 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIKTGGFDAVCFTSS 492
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVLF 113
++ L + I IG +A A + G L + E
Sbjct: 493 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGPLVDALAEHAARL 552
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 553 RAEGALPPPRKKSRR 567
>gi|288920171|ref|ZP_06414487.1| Uroporphyrinogen III synthase HEM4 [Frankia sp. EUN1f]
gi|288348421|gb|EFC82682.1| Uroporphyrinogen III synthase HEM4 [Frankia sp. EUN1f]
Length = 606
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 77/246 (31%), Gaps = 19/246 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R ++A + ++ G P+ +P R + + Y +A TS
Sbjct: 332 VLVPRTKEQAAILSDSLRAHGASPLEVPTIAVEPPRTAAPMERAITGLVSGRYQWVAFTS 391
Query: 57 SESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHG--KDNSINLAKI 105
++ L A + AIGEA+A R G + +S L +
Sbjct: 392 VNAVKAVQEKVEERSLDARAFAGVKVAAIGEATADALRAFGIRPDLIPSGQQSSEGLLED 451
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
E ++ + + + + Y + A P ++ L+
Sbjct: 452 WPEFDESLDLLDRVLLPRADIATDTLVAGVKDRGWQVDEVTAYRTVRAAPPPAPIREALK 511
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA++F + S+V + + + A+ V A +
Sbjct: 512 GGRVDAVVFTSSSTVRNLVGIAGKPHETTVIAVIGPATAATAQELGLRVDVQAAEASVPA 571
Query: 224 LLKLLP 229
L+ L
Sbjct: 572 LVTALA 577
>gi|262184019|ref|ZP_06043440.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium aurimucosum ATCC 700975]
Length = 560
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 75/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y + T
Sbjct: 287 RVLVPRTKEQAAAMSARLASHGAIPQSVPTISVEPPRNPAQMDRAIKGIVEGRYKWVVFT 346
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGK---DNSINLA 103
S ++S + + A+G+ +A R KG N+ L
Sbjct: 347 SVNAVSAVWKKIAELGLDARDFAGVHLAAVGQKTADAIRAKGMVPELLPPATKQNAEGLV 406
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ ++ L++ + + Y + A P ++++
Sbjct: 407 EVFPNYVEDIDAVGRVLLPRADIAGEALVTGLLDLGWEVDDVVAYRTVRAAPPAAEIRDM 466
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ + +A V V
Sbjct: 467 IKTGGFDAVAFTSPSTVRNLVGIAGKPHARTIIACIGPSTKAAAEEVGLRVDVVPEVADV 526
Query: 222 TSLLKLLPLR 231
L+ L
Sbjct: 527 PMLVDALAEH 536
>gi|218550974|ref|YP_002384765.1| uroporphyrinogen-III synthase [Escherichia fergusonii ATCC 35469]
gi|218358515|emb|CAQ91162.1| uroporphyrinogen III synthase [Escherichia fergusonii ATCC 35469]
Length = 246
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 71/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP +++ +G + PL F RE L+ + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGKVAWSFPLIEFTPGRELPTLSRHLETLGDNDLLFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++S A P + + LA + ++ +
Sbjct: 61 QHAVSFAHAQLQQQGLNWPSLPHYFAIGRTTALALHTVSGHKIRYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G L + +CY Y E M+ +
Sbjct: 121 LQSIAGKRALILRGNGGRELIGQTLTSRGADVTFCECYQRSAKHYDGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + +A +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAILAQELGWQDIQIADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|332159811|ref|YP_004296388.1| uroporphyrinogen-III synthase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318607647|emb|CBY29145.1| uroporphyrinogen-III synthase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664041|gb|ADZ40685.1| uroporphyrinogen-III synthase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862557|emb|CBX72711.1| uroporphyrinogen-III synthase [Yersinia enterocolitica W22703]
Length = 248
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++ +G + PL F + L Q+ + S
Sbjct: 1 MTILVTRPSPAGEQLVSRLRALGRVAWHAPLIDFSPGDDLPKLPALLQDMQAGDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R+ + + LA ++
Sbjct: 61 QNAVRYANPLLKRNNLSWPTQLSYYAIGRNTALALHTASRLHVTFPPTGETSEMLLSLPD 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L E + +CY I Y E + D
Sbjct: 121 LQQLTGKKALLLRGNGGRVLLGESLTERGATVTFCECYQRSPIFYDGSEQSAHWQRSGVD 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S+ +A+ + + VA +
Sbjct: 181 ILVVTSGEMLQQIYTLVPDYYRSSWLLHCRLVVVSDRLAALAAQMGWSNIRVAENADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LIRALQ 246
>gi|254777075|ref|ZP_05218591.1| hypothetical protein MaviaA2_20749 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 537
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +P+ +P R + + + TS
Sbjct: 270 VLVPRTKDQAGEMSERLTSYGALPIEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 329
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 330 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPAGEQSSLGLLDD 389
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 390 FPPYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAETREMIK 449
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 450 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGP 509
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 510 LVDALAEH 517
Score = 38.3 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + E+ + + A+ TSS
Sbjct: 402 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAETREMIKTGGFDAVCFTSS 461
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + I IG +A A + G + ++ L + E
Sbjct: 462 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGPLVDALAEHAARL 521
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 522 RAEGALPPPRKKSRR 536
>gi|85858419|ref|YP_460621.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Syntrophus aciditrophicus SB]
gi|85721510|gb|ABC76453.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Syntrophus aciditrophicus SB]
Length = 516
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 74/246 (30%), Gaps = 21/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
IVITRP +A ++ G + P + + + Y + TS+
Sbjct: 264 IVITRPESQAESLAALLEDAGARVISFPTIQIVAPESWEGLDSAIRRLEDYAWLIFTSAN 323
Query: 59 SLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + + IG A+A +G + ++
Sbjct: 324 GVRFFLERLYVTGKDVRDLKGIRLCTIGPATAAALENRGLRVDLVPETYLS--EGVVAAF 381
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD- 168
+ + + ++ + + L + V+ Y + + + + L+
Sbjct: 382 ERVAISGQRILLPRAEKARDVIPEGLTRQGAVVDVVSAYRTVNSGRDRSELVELIAQRRV 441
Query: 169 -AILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V F + P + C+ A+A + V +
Sbjct: 442 DVLTFTSPSTVTNFLEIMGPDFLPLPAGIRVACIGPVTAAAAEKAGLPVDILQEIYTIPG 501
Query: 224 LLKLLP 229
L++ L
Sbjct: 502 LVESLK 507
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/137 (9%), Positives = 34/137 (24%), Gaps = 8/137 (5%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TT 159
L K + + K ++ + + L + + E +
Sbjct: 247 LRKELNWFETRPLFGKGIVITRPESQAESLAALLEDAGARVISFPTIQIVAPESWEGLDS 306
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPL------PAKISAAFLCLSNNIASAIPASYKNVV 213
L++ ++F + + V +F + A+A+ V
Sbjct: 307 AIRRLEDYAWLIFTSANGVRFFLERLYVTGKDVRDLKGIRLCTIGPATAAALENRGLRVD 366
Query: 214 TVACFPKETSLLKLLPL 230
V ++
Sbjct: 367 LVPETYLSEGVVAAFER 383
>gi|183980869|ref|YP_001849160.1| uroporphyrin-III C-methyltransferase HemD [Mycobacterium marinum M]
gi|183174195|gb|ACC39305.1| uroporphyrin-III C-methyltransferase HemD [Mycobacterium marinum M]
Length = 558
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + + TS
Sbjct: 291 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 350
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 351 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPAGEQSSLGLLDE 410
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 411 FPPYDSIFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAATREMIK 470
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 471 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGP 530
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 531 LVDALAEH 538
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 423 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAATREMIKTGGFDAVCFTSS 482
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + I IG +A A + G + ++ L + E
Sbjct: 483 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGPLVDALAEHAARL 542
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 543 RAEGALPPPRKKSRR 557
>gi|238926757|ref|ZP_04658517.1| possible uroporphyrinogen-III synthase [Selenomonas flueggei ATCC
43531]
gi|238885289|gb|EEQ48927.1| possible uroporphyrinogen-III synthase [Selenomonas flueggei ATCC
43531]
Length = 506
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 30/243 (12%), Positives = 66/243 (27%), Gaps = 16/243 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-----QQSYGAIAITS 56
I++TR +A EK+ +G V P+ + +S Q Y + TS
Sbjct: 259 RILVTRARAQASALTEKLTALGASCVEAPVIRIVPPSDSYAGLDSAIGKLQDYHWVIFTS 318
Query: 57 SESLSTLPANFCRHTPIFAIGEA-------SACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ A +A R + + ++
Sbjct: 319 VNGVDHFFARLHHAGKDARALGYAKIAAIGTATRDRLRTYGIEADLVPQEFRAEAVVDAL 378
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--A 167
+ + P+ ++ + + L H + V Y + + + +
Sbjct: 379 RPILPPRAHILLPRAQEARDVLPESLSAHGATVDVAAAYETVPETEHGEELAAQMMDGAF 438
Query: 168 DAILFYARSSVLYFFSLPLP--AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D + F + S+V + C+ A + + A L+
Sbjct: 439 DYVTFTSSSTVKNLVRMLGNITPLQHTKIACIGPVTAETVESYALMSAMTARTYTIDGLV 498
Query: 226 KLL 228
+
Sbjct: 499 DCI 501
>gi|226305132|ref|YP_002765090.1| uroporphyrinogen-III methyltransferase/uroporphyrinogen-III
synthase [Rhodococcus erythropolis PR4]
gi|229490637|ref|ZP_04384475.1| uroporphyrinogen-III synthase [Rhodococcus erythropolis SK121]
gi|226184247|dbj|BAH32351.1| uroporphyrinogen-III methyltransferase/uroporphyrinogen-III
synthase [Rhodococcus erythropolis PR4]
gi|229322457|gb|EEN88240.1| uroporphyrinogen-III synthase [Rhodococcus erythropolis SK121]
Length = 520
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITS 56
+++ R +A +++ G IP+ +P R + Y + TS
Sbjct: 253 VLVPRTKDQAGEMSDRLVTHGAIPIEVPTIAVEPPRSPAQMERSVKGLVDGRYQWVVFTS 312
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAKI 105
+ ++ + F I IGEA+A R G + L
Sbjct: 313 TNAVRAVWEKFEEFGLDARAFSGVKIACIGEATAAKVRSFGINPELIPTGEQSSEGLLAE 372
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 373 FAPYDDVFDPVNRVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRAAPPPAETREMIK 432
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V +
Sbjct: 433 TGGFDAVCFTSSSTVRNLVGIAGKPHARTLVACIGPKTAETAIEFGLRVDVQPETSQVGP 492
Query: 224 LLKLLPLR 231
L++ L
Sbjct: 493 LVEALAEH 500
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + E+ + + A+ TSS
Sbjct: 385 RVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRAAPPPAETREMIKTGGFDAVCFTSS 444
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + + IG +A A + G + + + L + + E
Sbjct: 445 STVRNLVGIAGKPHARTLVACIGPKTAETAIEFGLRVDVQPETSQVGPLVEALAEHAARL 504
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 505 RAEGALPPPRKKSRR 519
>gi|320529106|ref|ZP_08030198.1| uroporphyrinogen-III C-methyltransferase [Selenomonas artemidis
F0399]
gi|320138736|gb|EFW30626.1| uroporphyrinogen-III C-methyltransferase [Selenomonas artemidis
F0399]
Length = 504
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 33/243 (13%), Positives = 67/243 (27%), Gaps = 15/243 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-----SVFLAMQQSYGAIAITS 56
I++TR +A EK+ +G + P+ + +A +Y + TS
Sbjct: 258 RILVTRARVQASALTEKLTALGAACIEAPVIRIAPPADGYAALDGAIAELNAYQWLIFTS 317
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINL-------AKIIVEQ 109
+ A + A + +L + E
Sbjct: 318 VNGVEHFFARLHAAGKDTRALGYARVAAIGAATSAALRAFGIRADLVPPEFRAEAVAEEL 377
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-NAD 168
+ L P+ ++ + D L H + V+ Y + + L D
Sbjct: 378 RPLLPPRARILLPRAQEARDVLPDTLRAHGAIVDVVAAYETVPEIEDAAIAQRLASGEID 437
Query: 169 AILFYARSSVLYFFSLPLP--AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F + S+V + C+ A + VA L++
Sbjct: 438 MVTFTSSSTVKNLVKMLGNITPLQQVKIACIGPVTADTARSFALEPDIVAKEYTIDGLVR 497
Query: 227 LLP 229
+
Sbjct: 498 SIK 500
>gi|291004410|ref|ZP_06562383.1| uroporphyrinogen III synthase/methyltransferase [Saccharopolyspora
erythraea NRRL 2338]
Length = 480
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 72/249 (28%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A E++ G + +P R + Y + T
Sbjct: 210 KVLVPRTKEQAGSMSERLWSHGAVSHEVPTISVEPPRSPAQMERAVKGLVDGRYQWVVFT 269
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + F I +GEA+A R G + L +
Sbjct: 270 STNAVRAVWEKFREFGLDARAFSGVKIACVGEATAEKVRSFGINPELVPSGEQSSEGLLQ 329
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + + Y + A P + ++
Sbjct: 330 DFPPHDDILDPVDRVLLPRADIATETLAAGLRERGWEIDDVTAYRTVRAAPPPAETREMI 389
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ + A V P+
Sbjct: 390 KTGGFDAVCFTSASTVRNLVGIAGKPHARTLVACIGPSTAETAKEFGLRVDVQPEVPQIP 449
Query: 223 SLLKLLPLR 231
L+ L
Sbjct: 450 VLVDALAEH 458
>gi|307132976|ref|YP_003884992.1| uroporphyrinogen III synthase [Dickeya dadantii 3937]
gi|306530505|gb|ADN00436.1| uroporphyrinogen III synthase [Dickeya dadantii 3937]
Length = 246
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 69/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP + +++ G PL F + L + + S
Sbjct: 1 MTILVTRPSPAGEQLVARLRMAGQQAYHSPLIEFSPGGELPQLPAMLQALRPGDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF------HGKDNSINLAKIIVEQK 110
+ + R + + R G H ++
Sbjct: 61 QQVVEYADPALSRAGTGWPKALTYFAVGRSTGLALHTVSGLPVHYPPERATSETLLQSPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G D L + +R +CY + Y E + D
Sbjct: 121 LQQVTGKQALLLRGNGGRELLGDTLQQRGAQVRYCECYQRNPVVYDGAEQCQRWQRLGID 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + F++L + +S +A + +A +
Sbjct: 181 TLVITSGEMLQQFYTLVPDYYRTAWLPGCRVVVVSERLADMARELGWRDIRIADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LMRALQ 246
>gi|78224426|ref|YP_386173.1| uroporphyrinogen-III synthase/uroporphyrinogen-III
C-methyltransferase [Geobacter metallireducens GS-15]
gi|78195681|gb|ABB33448.1| uroporphyrinogen-III C-methyltransferase [Geobacter metallireducens
GS-15]
Length = 513
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 58/246 (23%), Gaps = 22/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
I++TR +A + +G + P + +A + TS
Sbjct: 262 ILVTRAADQAGEFGAMLGALGARVLECPTIAIVPPESWDNLDAAIASLDRFHWAVFTSVN 321
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ + + A+G +A G D ++
Sbjct: 322 AVRFFFERLAAAGKDSRALGNCRVCAVGPKTAAALAPFGIRPDLIPADY--KGEGVVEVF 379
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ K +I+ G L E + Y + + L+
Sbjct: 380 RSEEIAGKRIIFPKGDRARDVIPQGLAELGGEVTAPVAYRNVTPDSLPAGVIAELEERRI 439
Query: 170 IL--FYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
F + S+V ++ + A V
Sbjct: 440 TCVTFTSSSTVENLAAILGENRFLHLLKGVTIAAIGPITARTCRELGLEVHVEPSKYTLA 499
Query: 223 SLLKLL 228
++ L
Sbjct: 500 AMTDAL 505
>gi|307331357|ref|ZP_07610477.1| Uroporphyrinogen III synthase HEM4 [Streptomyces violaceusniger Tu
4113]
gi|306882980|gb|EFN14046.1| Uroporphyrinogen III synthase HEM4 [Streptomyces violaceusniger Tu
4113]
Length = 552
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 273 KVLVPRTKEQAASLSDQLRSYGAVPSEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 332
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 333 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTARSLIDFGVKPDLVPSGEQSAAGLLE 392
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 393 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 452
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+LF + S+V + C+ A V ++ P
Sbjct: 453 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVL 512
Query: 223 SLLKLLP 229
L + L
Sbjct: 513 KLAEALA 519
>gi|51245586|ref|YP_065470.1| uroporphyrinogen III synthase/methyltransferase (HemD+CobA)
[Desulfotalea psychrophila LSv54]
gi|50876623|emb|CAG36463.1| probable uroporphyrinogen III synthase/methyltransferase
(HemD+CobA) [Desulfotalea psychrophila LSv54]
Length = 520
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 72/250 (28%), Gaps = 25/250 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
I++TR ++A +++++ G + +E L Q + I TS
Sbjct: 264 KIIVTRTREQASELVQELEEQGANCLECATIKISPIKEPKELDNALERLQEFHWILFTSI 323
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + I +G ++A R+ G +
Sbjct: 324 NGVKYFFERLFSKGMDARDLKGCDIAVVGPSTADYLRKYGLNADLFPPVF--TGEGLAQA 381
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-- 166
+ ++ + + L + V Y ++ IA + M+ L++
Sbjct: 382 LLDQGVEGRNILIPRAQQAREIVPENLRGAGAQVTVAPVYVTKPIAENKKEMRAELESGT 441
Query: 167 ADAILFYARSSVLYFFSLPLPAKIS--------AAFLCLSNNIASAIPASYKNVVTVACF 218
D + F + S+V F + P + A + + V
Sbjct: 442 VDMVTFTSSSTVTNFIKMLQPESPEELASLLKGVRIAAIGPITAKTVTDNGLQVDVQPEN 501
Query: 219 PKETSLLKLL 228
+L +
Sbjct: 502 YTIAGMLDAI 511
>gi|108760536|ref|YP_630876.1| uroporphyrinogen-III synthase [Myxococcus xanthus DK 1622]
gi|108464416|gb|ABF89601.1| uroporphyrinogen-III synthase [Myxococcus xanthus DK 1622]
Length = 256
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 76/238 (31%), Gaps = 12/238 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSS 57
+++TRP ++A ++ G + +PL + LA Q Y + S
Sbjct: 9 RVLVTRPRERAEELCFLLEDEGAEVLSVPLLELHPPEDPRPLASAAEHIQRYTWVVFASP 68
Query: 58 ESLSTLPANFC------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ L R + +G+ + + + A ++ K
Sbjct: 69 TGVDALMEALREAGTQDRIQRVKVATVGPRTTRAAEGYGLVVVAEPSEGTGAALLNLIKD 128
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK-NLLQNADAI 170
P ++ + ED L E+ + + + Y + P ++ D +
Sbjct: 129 ALQPGDEVLLPAAEEGRRELEDGLREYGLLVTRVTAYRATPAPLPPESLALLDASPPDVV 188
Query: 171 LFYARSSVLYFFSLPLPAKISA-AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
LF + + F +++ + + ASA+ VA P SL+
Sbjct: 189 LFASPRTAEAFVEEAGRERLATARVVAIGPTTASALERLGVPAAAVAERPTPESLVDA 246
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/127 (11%), Positives = 29/127 (22%), Gaps = 7/127 (5%)
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNA 167
K ++ + R L + + + P + +Q
Sbjct: 1 MERRLEGKRVLVTRPRERAEELCFLLEDEGAEVLSVPLLELHPPEDPRPLASAAEHIQRY 60
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++F + + V A + A VV
Sbjct: 61 TWVVFASPTGVDALMEALREAGTQDRIQRVKVATVGPRTTRAAEGYGLVVVAEPSEGTGA 120
Query: 223 SLLKLLP 229
+LL L+
Sbjct: 121 ALLNLIK 127
>gi|242277728|ref|YP_002989857.1| uroporphyrin-III C-methyltransferase [Desulfovibrio salexigens DSM
2638]
gi|242120622|gb|ACS78318.1| uroporphyrin-III C-methyltransferase [Desulfovibrio salexigens DSM
2638]
Length = 504
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 75/246 (30%), Gaps = 22/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR ++A + K+G P + + ++ + TS
Sbjct: 255 VVVTRAREQASGLVSTLGKLGACVFEFPTINIEPVADYADVQAEIKALSNWDWLIFTSVN 314
Query: 59 SLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + I AIG A+A ++G F + ++
Sbjct: 315 GVKHFFSQMDEAGLDARAFAGLEIAAIGPATADALVERGIRPDFVPEKYVA--EGVVAGL 372
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
K ++ K + L + ++++ Y + + L+
Sbjct: 373 LEKGIKGKKVLIPRAKIAREVLPEELRKAGAEVKILPVYETGLSENDPGPIAEALEAGKI 432
Query: 168 DAILFYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D + F + S+V FF+L P K S C+ A +
Sbjct: 433 DYLTFTSSSTVENFFNLIEPEVFHKYKDSVKIACIGPITAKTLEGFGYEPDIQPEDYTIP 492
Query: 223 SLLKLL 228
+L+ +L
Sbjct: 493 ALVDVL 498
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/185 (10%), Positives = 51/185 (27%), Gaps = 8/185 (4%)
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ +L + + + + + +K +L + +
Sbjct: 191 ETPVALVRWGTRCNQQSFVSTLENVAEEAKERKFKAPSIIVVGGVCSLHDKLAWFEKKPL 250
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILF 172
K ++ + + L + + + +A + L N D ++F
Sbjct: 251 LGKGVVVTRAREQASGLVSTLGKLGACVFEFPTINIEPVADYADVQAEIKALSNWDWLIF 310
Query: 173 YARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + V +FFS A + A + A A+ V ++
Sbjct: 311 TSVNGVKHFFSQMDEAGLDARAFAGLEIAAIGPATADALVERGIRPDFVPEKYVAEGVVA 370
Query: 227 LLPLR 231
L +
Sbjct: 371 GLLEK 375
Score = 39.8 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 20/72 (27%), Gaps = 4/72 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
++I R E+++K G ++P+ + TSS
Sbjct: 381 KVLIPRAKIAREVLPEELRKAGAEVKILPVYETGLSENDPGPIAEALEAGKIDYLTFTSS 440
Query: 58 ESLSTLPANFCR 69
++
Sbjct: 441 STVENFFNLIEP 452
>gi|325499228|gb|EGC97087.1| uroporphyrinogen-III synthase [Escherichia fergusonii ECD227]
Length = 246
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 71/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP +++ +G + PL F RE L+ + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGKVAWSFPLIEFTPGRELPTLSRHLETLGDNDLLFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++S A P + + LA + ++ +
Sbjct: 61 QHAVSFAHAQLQQQGLNWPSLPHYFAIGRTTALALHAVSGHKIRYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G L + +CY Y E M+ +
Sbjct: 121 LQSIAGKRALILRGNGGRELIGQTLTSRGADVTFCECYQRSAKHYDGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + +A +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAILAQELGWQDIQIADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|327395979|dbj|BAK13401.1| uroporphyrinogen-III synthase HemD [Pantoea ananatis AJ13355]
Length = 242
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 68/241 (28%), Gaps = 13/241 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP A ++ G +PL F + LA + + + S
Sbjct: 1 MTILVTRPEPAAAELVSRLHAQGKQAWSLPLIEFAPGNDLLQLPATLATLKRGDLVFLLS 60
Query: 57 SESLSTLPANFCRHTPIFAIG--EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + S LA ++I +
Sbjct: 61 QQVIHFAQHAIKAWPADVDYYAIGRSTALAFHTISGLQVTYPHAHETSEELIKLATLQQI 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILF 172
K + L G + L+ + +CY Y + +N ++
Sbjct: 121 AGKHALILRGNQGRELLSETLVARGAQVTYAECYQRCQKHYDGAIEGRRWRDRNIHTLVV 180
Query: 173 YARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + +SL + + +S +AS + VA +LL+
Sbjct: 181 TSGEMLHQLYSLFPEVDREEWLLRCRLVVVSERLASLAADLGWQTIQVADGADNDALLRA 240
Query: 228 L 228
L
Sbjct: 241 L 241
>gi|324111027|gb|EGC05014.1| uroporphyrinogen-III synthase HemD [Escherichia fergusonii B253]
Length = 246
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 71/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP +++ +G + PL F RE L+ + S
Sbjct: 1 MSILVTRPSPAGEELVSRLRTLGKVAWSFPLIEFTPGRELPTLSRHLETLGDNDLLFALS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++S A P + + LA + ++ +
Sbjct: 61 QHAVSFAHAQLQQQGLNWPSLPHYFAIGRTTALALHTVSGHKIRYPQDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G L + +CY Y E M+ +
Sbjct: 121 LQSIAGKRALILRGNGGRELIGQTLTLRGADVTFCECYQRSAKHYDGAEEAMRWQSRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + +A +
Sbjct: 181 TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAILAQELGWQDIQIADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|227549756|ref|ZP_03979805.1| uroporphobilinogen-III synthase [Corynebacterium lipophiloflavum
DSM 44291]
gi|227078142|gb|EEI16105.1| uroporphobilinogen-III synthase [Corynebacterium lipophiloflavum
DSM 44291]
Length = 568
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 36/250 (14%), Positives = 76/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y I T
Sbjct: 293 RVLVPRAKEQAGPMNARLSSYGAIPQSVPTISMEPPRNPAQMDRAIKGIVEGRYQWIVFT 352
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASA---CLARQKGFTQIFHGKDNSINLA 103
S+ ++ + F + A+G+ + K N+ L
Sbjct: 353 STNAVDAVWDKFEELGLDARSFAGVHLAAVGQKTGDALRARGMLPELIPHRTKQNAHGLV 412
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+I E P ++ D L++ + + Y + A P ++++
Sbjct: 413 EIFPEYVEDIDPVSRVLLPRADLGTDVLVDGLVDLGWEVDDVVAYRTVRAAPPPLEVRDM 472
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+++ DA+ F + S+V + + A+ V V
Sbjct: 473 IKSGGFDAVCFTSASTVKNLVGIAGKPHQRTIIAAIGPMAAAEAREQGLRVDVVPEVADV 532
Query: 222 TSLLKLLPLR 231
SL+ L
Sbjct: 533 PSLVDALAEH 542
>gi|158317871|ref|YP_001510379.1| uroporphyrinogen III synthase HEM4 [Frankia sp. EAN1pec]
gi|158113276|gb|ABW15473.1| Uroporphyrinogen III synthase HEM4 [Frankia sp. EAN1pec]
Length = 604
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 19/246 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R ++A + ++ G P+ +P R + + Y +A TS
Sbjct: 330 VLVPRTKEQAAILSDSLRAHGASPLEVPTIAVEPPRTAAPMERAITGLVSGRYQWVAFTS 389
Query: 57 SESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHG--KDNSINLAKI 105
++ L A + AIGEA+A R G + +S L +
Sbjct: 390 VNAVKAVQEKVEERSLDARAFAGVKVAAIGEATADALRAFGIRPDLVPAGQQSSEGLLED 449
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
E ++ + + + + Y + A P ++ L+
Sbjct: 450 WPEFDESLDLLDRVLLPRADIATDTLVAGVKDRGWQVDDVTAYRTVRAAPPPAPIREALK 509
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA++F + S+V + + + A+ V A S
Sbjct: 510 GGRVDAVVFTSSSTVRNLVGIAGKPHETTVIAVIGPATAATAQELGLRVDVQATEASIPS 569
Query: 224 LLKLLP 229
L+ L
Sbjct: 570 LVASLA 575
>gi|296268255|ref|YP_003650887.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Thermobispora bispora DSM 43833]
gi|296091042|gb|ADG86994.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Thermobispora bispora DSM 43833]
Length = 526
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 73/247 (29%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A E+++ G +P +P R + Y + T
Sbjct: 248 RVLVPRTKEQAKELTEQLRAYGAVPEEVPTISVEPPRTPQQMDRAIKGLINGRYEWVVFT 307
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ L F + I A+G+A+A G + L
Sbjct: 308 SVNAVKALREKFEEYGLDARAFAGLKIAAVGDATARSLMDFGIRPDLVPTGEQSSEGLLA 367
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
L P ++ L E + Y + A P ++ +
Sbjct: 368 EWPPYDSLLDPINRVLLPRADIATDTLIAGLTELGWECDDVTAYRTVRAAPPPAPIREAI 427
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+LF + S+V + + A V +A P +
Sbjct: 428 KSGGFDAVLFTSSSTVRNLIGIAGKPHNVTVIAVIGPQTAKTAQEFGLRVDVMAEKPSVS 487
Query: 223 SLLKLLP 229
L L
Sbjct: 488 LLAAALA 494
>gi|288550562|ref|ZP_06391087.1| uroporphyrinogen-III synthase [Enterobacter cancerogenus ATCC
35316]
gi|288314626|gb|EFC53564.1| uroporphyrinogen-III synthase [Enterobacter cancerogenus ATCC
35316]
Length = 249
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP + +++ +G + PL F R+ LA + + S
Sbjct: 1 MSILVTRPSPAGEQLVSRLRALGRVAWSFPLIEFSPGRQLSMLADQLHTLREGDLLFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEA------SACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ A + + + LA + ++ +
Sbjct: 61 QHAVDFAHAQLQQQQRDWPAAPRYFAIGRTTALALHTVSGSEILYPLDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ + +
Sbjct: 121 LQTIVGKRALILRGNGGRELLGETLRARGADVTFCECYQRCAKHYDGAEEAMRWHTRGIN 180
Query: 169 AILFYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + L +S +A+ + +A +
Sbjct: 181 TLVVTSGEMLQQLWTLIPQWYRENWLLRCRLLVVSERLANQARELGWQDIRIADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|224370661|ref|YP_002604825.1| HemD [Desulfobacterium autotrophicum HRM2]
gi|223693378|gb|ACN16661.1| HemD [Desulfobacterium autotrophicum HRM2]
Length = 513
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 64/246 (26%), Gaps = 22/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
IV+TR +A + +G + +P + R+ L + + TS
Sbjct: 259 IVVTRARVQASELVGSLSALGARCIEIPTIQVVPPRDPAPLVNAVKNLSDFDWVVFTSVN 318
Query: 59 SLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ IG A+ G K +
Sbjct: 319 GVKLFFKTLYGEQMDVRALGGLKFACIGPATKAELFVHGIVSDILPKTYMAESV--VEAF 376
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNA 167
+ K ++ K + L + + + Y + E + L+
Sbjct: 377 SNVEIQGKRVLLPRAKQARTILPEELDKLGARVTEVTAYETIAEHLDEAELARLVAESKV 436
Query: 168 DAILFYARSSVLYFFSL-----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D + F + S+V F L L C+ A + VA
Sbjct: 437 DIVTFTSSSTVENFKRLVMDKKVLEMGPEVIAACIGPITAETAASLGIRPDIVATEFTIP 496
Query: 223 SLLKLL 228
L+ +
Sbjct: 497 GLVDAI 502
>gi|310820651|ref|YP_003953009.1| uroporphyrinogen-III synthase [Stigmatella aurantiaca DW4/3-1]
gi|309393723|gb|ADO71182.1| Uroporphyrinogen-III synthase [Stigmatella aurantiaca DW4/3-1]
Length = 253
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 69/243 (28%), Gaps = 16/243 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
++ITRP ++A ++ G + +P+ + Q Y + S
Sbjct: 9 RVLITRPKERAEELCFLLEDEGAEVMSLPMLELRPPEDPRPLAAAAESIQRYRWVVFASP 68
Query: 58 ESLSTLPANFCR--------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ L H I +G +A G +
Sbjct: 69 SAVEALMEALREAGTVDRLSHVRIAVVGPRTARTVEGYGLKVTAEPA--EATGLGLFAAI 126
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN-LLQNAD 168
+ P+ ++ G+ E L E + + + Y S + D
Sbjct: 127 RDALHPEDEVLLPAGEEGRRELELALREQGVRVTRVTAYRSTPAPLSPEAQEALGQMPPD 186
Query: 169 AILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+LF + + F + +A + + AS + V VA P L+
Sbjct: 187 VVLFASPRTAEVFLEATGAEGLGAAKVVAIGPTTASVLARLGIGVAAVAERPTPEGLVDA 246
Query: 228 LPL 230
Sbjct: 247 TVR 249
>gi|120401861|ref|YP_951690.1| uroporphyrinogen III synthase HEM4 [Mycobacterium vanbaalenii
PYR-1]
gi|119954679|gb|ABM11684.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Mycobacterium vanbaalenii PYR-1]
Length = 571
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A +++ G +P+ +P R + + + TS
Sbjct: 304 VLVPRTKDQAGEMSDRLVGHGALPIEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 363
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +G+A+A R G +L
Sbjct: 364 TNAVRAVWEKFNEFGLDARAFSGVKIACVGQATAERVRAFGINPELVPTGEQSSLGLLDE 423
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 424 FPPYDDIFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAQTREMIK 483
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 484 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAAEFGLRVDVQPEVAAVGP 543
Query: 224 LLKLLPLR 231
L++ L
Sbjct: 544 LVEALAEH 551
Score = 38.3 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + ++ + + A+ TSS
Sbjct: 436 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAQTREMIKTGGFDAVCFTSS 495
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + + IG +A A + G + ++ L + + E
Sbjct: 496 STVRNLVGIAGKPHARTIVACIGPKTAETAAEFGLRVDVQPEVAAVGPLVEALAEHAARL 555
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 556 RAEGALPPPRKKSRR 570
>gi|215444617|ref|ZP_03431369.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis T85]
gi|260199513|ref|ZP_05767004.1| putative uroporphyrin-III C-methyltransferase [Mycobacterium
tuberculosis T46]
gi|297729975|ref|ZP_06959093.1| putative uroporphyrin-III C-methyltransferase [Mycobacterium
tuberculosis KZN R506]
gi|308374025|ref|ZP_07434557.2| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu006]
gi|308343308|gb|EFP32159.1| uroporphyrin-III C-methyltransferase hemD [Mycobacterium
tuberculosis SUMu006]
Length = 534
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + I TS
Sbjct: 267 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWIVFTS 326
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 327 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPSGEQSSLGLLDD 386
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P T + +++
Sbjct: 387 FPPYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIK 446
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 447 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGP 506
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 507 LVDALAEH 514
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 399 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIKTGGFDAVCFTSS 458
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVLF 113
++ L + I IG +A A + G L + E
Sbjct: 459 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGPLVDALAEHAARL 518
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 519 RAEGALPPPRKKSRR 533
>gi|300779914|ref|ZP_07089770.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Corynebacterium genitalium ATCC 33030]
gi|300534024|gb|EFK55083.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Corynebacterium genitalium ATCC 33030]
Length = 566
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 77/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y I T
Sbjct: 295 RVLVPRAKEQAGVMNARLNSYGAIPQSVPTISMEAPRNPAQMDRAIKGIVEGRYQWIVFT 354
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGK---DNSINLA 103
S + + F + A+GE +A R +G N+ L
Sbjct: 355 SVNGVDAVWDKFEELGLDARSFAGVHLAAVGEKTADAIRSRGMIPELIPHRTKQNAHGLV 414
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
I E P ++ + D L+E + + Y + A P ++++
Sbjct: 415 DIFPEYVEEIDPVGRVLLPRADIGSDVLVDGLVERGWEVDDVVAYRTVRAAPPAPEVRDM 474
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ A+ V V
Sbjct: 475 IKTGGFDAVCFTSASTVKNLVGIAGKPHPRTIIACIGPMAAAEAKEQGLRVDVVPEVADV 534
Query: 222 TSLLKLLPLR 231
SL+ L
Sbjct: 535 PSLVDALAEH 544
>gi|320354664|ref|YP_004196003.1| uroporphyrinogen-III C-methyltransferase; uroporphyrinogen-III
synthase [Desulfobulbus propionicus DSM 2032]
gi|320123166|gb|ADW18712.1| uroporphyrinogen-III C-methyltransferase; uroporphyrinogen-III
synthase [Desulfobulbus propionicus DSM 2032]
Length = 526
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 25/248 (10%), Positives = 66/248 (26%), Gaps = 21/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
IV+TR ++A K+++ G + + + LA +Y + TS
Sbjct: 266 RIVVTRTREQASDLVAKLEEYGAECLEYSTIHIEPVADYRVLDQALAEIHAYAWLLFTSL 325
Query: 58 ESLSTLPANFCRHTPIFAIGEAS-------ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + A K + + +
Sbjct: 326 NAVTYFFQRLFVLGHDSRHLAGTKIAVVGKATAEELKKYGLKADLIPDKFTGEGLAKALV 385
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
++ + + LI+ + + Y + + +++ L++
Sbjct: 386 ETEVNGSRILLPRALKASDLLPETLIDAGAEVTIAPVYQNVPPQGRKEELRDQLESGSID 445
Query: 170 -ILFYARSSVLYFFSLPLPAKIS--------AAFLCLSNNIASAIPASYKNVVTVACFPK 220
I F + S+V F ++ + A + V
Sbjct: 446 LITFTSSSTVTNFLAMLDAGSDEELHRLMDAVRIAAIGPITAETVREHGLRVDIQPERYT 505
Query: 221 ETSLLKLL 228
++ +
Sbjct: 506 IDDMVHAI 513
>gi|312141092|ref|YP_004008428.1| uroporphyrinogen-iii synthase hemd [Rhodococcus equi 103S]
gi|325674098|ref|ZP_08153788.1| multifunctional enzyme siroheme synthase CysG [Rhodococcus equi
ATCC 33707]
gi|311890431|emb|CBH49749.1| secreted uroporphyrinogen-III synthase HemD [Rhodococcus equi 103S]
gi|325555363|gb|EGD25035.1| multifunctional enzyme siroheme synthase CysG [Rhodococcus equi
ATCC 33707]
Length = 521
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITS 56
+++ R ++A +++ G IP+ +P R + Y + TS
Sbjct: 253 VLVPRTKEQAADMSDRLVTHGAIPIEVPTIAVEPPRSPAQMERSVKGLVDGRYQWVVFTS 312
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAKI 105
+ ++ + F I +GEA+A R G T + L
Sbjct: 313 TNAVRAVWEKFEAFGLDARAFSGVKIACVGEATAEKVRSFGITPELVPSGEQSSEGLLAD 372
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 373 FPPYDEVFDPVNRVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRAAPPPAETREMIK 432
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V +
Sbjct: 433 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAIEFGLRVDVQPETAQMGP 492
Query: 224 LLKLLPLR 231
L++ L
Sbjct: 493 LVEALAEH 500
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 8/132 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + E+ + + A+ TSS
Sbjct: 385 RVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRAAPPPAETREMIKTGGFDAVCFTSS 444
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVLF 113
++ L + + IG +A A + G + L + + E
Sbjct: 445 STVRNLVGIAGKPHARTIVACIGPKTAETAIEFGLRVDVQPETAQMGPLVEALAEHAARL 504
Query: 114 TPQKPLIYLGGK 125
+ L K
Sbjct: 505 RAEGALPPPRKK 516
>gi|300933795|ref|ZP_07149051.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium resistens DSM 45100]
Length = 598
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 73/249 (29%), Gaps = 20/249 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A ++ G IPV +P R V + Y + TS
Sbjct: 325 VLVPRAKNQAGPMSARLASHGAIPVEVPTISVEPPRTPVQMERAIKGIVDGHYHWVVFTS 384
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN---LAK 104
++ + A+G +A G T KDN+ N L
Sbjct: 385 VNAVKATWEKLQEFGLDARALAGVRVAAVGPKTAQSVLDLGITPELLPKDNARNASGLVD 444
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ ++ D LI+ + + Y + A P +++++
Sbjct: 445 VFPAYDPDVDMVDKVLLPRADIATDVLVDGLIDLGWDVEDVVAYRTVRAAPPSPEIRDMI 504
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ A V +
Sbjct: 505 KTGGFDAVCFTSSSTVKNLVGIAGKPHARTIIACIGPMAAQTAREHGLRVDVMPEAAGVP 564
Query: 223 SLLKLLPLR 231
L+ L
Sbjct: 565 ELVDALAEH 573
>gi|134300008|ref|YP_001113504.1| uroporphyrin-III C-methyltransferase [Desulfotomaculum reducens
MI-1]
gi|134052708|gb|ABO50679.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Desulfotomaculum reducens MI-1]
Length = 512
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 69/250 (27%), Gaps = 22/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TR ++A I+ +G P P + + +SY + TS
Sbjct: 258 RVIVTRSREQASVLSSAIEALGGEPWEFPTIQIAEPEDFTMLDSAITDVRSYRWVIFTSV 317
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + AIG + ++G + + +I+
Sbjct: 318 NGVQRFFERMRNNKKDIRDLSDVRLCAIGPKTREELEKRGLMVDYVPGEYRA--EEIVAG 375
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ P ++ L E + + Y + ++ L N D
Sbjct: 376 LRGKVMPGDRVLLPRADIARKLLPKALEEMGALVHEVVAYRTVLGDGNAKAIRESLANGD 435
Query: 169 AIL--FYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + S+V F L + + + V A
Sbjct: 436 ISVVTFTSSSTVQNFVKLIAEEDLPRLMEKVVVASIGPITSDTARKLGLRVDVEAKEYTI 495
Query: 222 TSLLKLLPLR 231
L++ +
Sbjct: 496 GGLVQAITEH 505
>gi|78357878|ref|YP_389327.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220283|gb|ABB39632.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 503
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 21/248 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSE 58
IV+TR ++A + ++G + P + + Y + TS
Sbjct: 254 IVVTRAREQASGLAASLTQLGAEVIQFPTILIRPLEDYAPVHDAIRRLAEYDWLVFTSVN 313
Query: 59 SLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + AIG A+A + R+KG F + ++
Sbjct: 314 GVKHFWQQMGLLGLDSRALGGVKVAAIGPATADVLREKGIEPDFIPEKYVA--EGVVKGM 371
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ + + L + V+ Y + + + +L+
Sbjct: 372 IERGMDGSRVLLPRARVAREVLPEELARAGARVDVLPVYETVPGDANRSHVLEMLEEGRI 431
Query: 170 --ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V FFSL P + C+ + +
Sbjct: 432 DCITFGSSSTVDNFFSLVEPEAMRRYEHVHMACIGPVTRKTLERYGFTCSIQPEDYTIPA 491
Query: 224 LLKLLPLR 231
L+ L +
Sbjct: 492 LVDELVRQ 499
Score = 41.7 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 34/108 (31%), Gaps = 11/108 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
+++ R E++ + G ++P+ + + + + + I SS
Sbjct: 380 RVLLPRARVAREVLPEELARAGARVDVLPVYETVPGDANRSHVLEMLEEGRIDCITFGSS 439
Query: 58 ESLSTLP-------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDN 98
++ H + IG + + GFT +D
Sbjct: 440 STVDNFFSLVEPEAMRRYEHVHMACIGPVTRKTLERYGFTCSIQPEDY 487
>gi|19703979|ref|NP_603541.1| uroporphyrinogen-III synthase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714160|gb|AAL94840.1| Uroporphyrin-III C-methyltransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 485
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 14/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A+ E I K G IPV +P + + + L + Y AI S +
Sbjct: 253 KILVTRDKKQAVEMSENISKRGGIPVELPFIEIENLK--IDLKDLEKYKAILFNSPNGVK 310
Query: 62 TLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDN-SINLAKIIVEQKVLFTP 115
N + I A+G + + + F + LA+ +V+
Sbjct: 311 AFFENIKDIRCLANIKIGAVGVKTKEILEKYKIVPDFVPNEYLVDKLAEEVVKYTNENDN 370
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + + Y +K + Y ++ + + L++ D I F +
Sbjct: 371 ---ILIVTSDISPCDTDKYNSLYKRNYEKVVAYNTKKLKVDREKVLETLKDIDIITFLSS 427
Query: 176 SSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F+ + + I V A LL ++
Sbjct: 428 STVEAFYENLDGDFFILGDKKIASIGPMTSETIKKLGMKVDYEAEKYTADGLLDVI 483
>gi|118619688|ref|YP_908020.1| uroporphyrin-III C-methyltransferase HemD [Mycobacterium ulcerans
Agy99]
gi|118571798|gb|ABL06549.1| uroporphyrin-III C-methyltransferase HemD [Mycobacterium ulcerans
Agy99]
Length = 557
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + + TS
Sbjct: 290 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVAPPRSPAQMERAVKGLVDGRFQWVVFTS 349
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 350 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPAGEQSSLGLLDE 409
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 410 FPPYDSIFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAATREMIK 469
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 470 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGP 529
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 530 LVDALAEH 537
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 422 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAATREMIKTGGFDAVCFTSS 481
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + I IG +A A + G + ++ L + E
Sbjct: 482 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGPLVDALAEHAARL 541
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 542 RAEGALPPPRKKSRR 556
>gi|296168170|ref|ZP_06850191.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896848|gb|EFG76477.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 522
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +P+ +P R + + + TS
Sbjct: 255 VLVPRTKDQAGEMSERLTSYGALPIEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 314
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 315 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPAGEQSSLGLLDD 374
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 375 FPPYDSIFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAETREMIK 434
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 435 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGP 494
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 495 LVDALAEH 502
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + E+ + + A+ TSS
Sbjct: 387 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPAETREMIKTGGFDAVCFTSS 446
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + I IG +A A + G + ++ L + E
Sbjct: 447 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPETAAVGPLVDALAEHAARL 506
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 507 RAEGALPPPRKKSRR 521
>gi|167967418|ref|ZP_02549695.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Mycobacterium tuberculosis H37Ra]
Length = 437
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + I TS
Sbjct: 170 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWIVFTS 229
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GE++A R G + +L
Sbjct: 230 TNAVRAVWEKFGEFGLDARAFSGVKIACVGESTADRVRAFGISPELVPSGEQSSLGLLDD 289
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P T + +++
Sbjct: 290 FPPYDSVFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIK 349
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 350 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGP 409
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 410 LVDALAEH 417
Score = 37.1 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 302 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPATTREMIKTGGFDAVCFTSS 361
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVLF 113
++ L + I IG +A A + G L + E
Sbjct: 362 STVRNLVGIAGKPHARTIIACIGPKTAETAAEFGLRVDVQPDTAAIGPLVDALAEHAARL 421
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 422 RAEGALPPPRKKSRR 436
>gi|85060345|ref|YP_456047.1| uroporphyrinogen-III synthase [Sodalis glossinidius str.
'morsitans']
gi|84780865|dbj|BAE75642.1| uroporphyrinogen III synthase [Sodalis glossinidius str.
'morsitans']
Length = 246
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 75/245 (30%), Gaps = 17/245 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++ G +PL F + + LA + + I S
Sbjct: 1 MSILVTRPSPAGEQLVNRLRARGKSAWHLPLIEFTPGNDLPQLAQRLADLSAGDLLFIVS 60
Query: 57 SESLSTLPANFCRHTPIFA------IGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + + + L D ++
Sbjct: 61 QHAINYAHPWLTQQGVTWPAGLQYFAVGRTTGLRLHGLCGLPVSYPDEGETSEDLLRLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G E L + + +CY I Y E + + D
Sbjct: 121 LARIEGKRALILRGNGGREVLEQTLRQRGVHTTYCECYRRSPIHYNGEEQGRRVQTLSID 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + F++L + + +S +A + VA +
Sbjct: 181 TLVITSGEMLQQFYTLMPEYYRHAWLMHCRLIVISERLAILARQLGWTDIVVANAADNDA 240
Query: 224 LLKLL 228
L+++L
Sbjct: 241 LMRVL 245
>gi|87307984|ref|ZP_01090126.1| uroporphyrinogen III synthase/methyltransferase [Blastopirellula
marina DSM 3645]
gi|87289066|gb|EAQ80958.1| uroporphyrinogen III synthase/methyltransferase [Blastopirellula
marina DSM 3645]
Length = 485
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 30/245 (12%), Positives = 65/245 (26%), Gaps = 18/245 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I+ITRP +A + ++G + P + + + + +S+
Sbjct: 240 RILITRPEHQAEDLAHTLAELGADVYLQPAIQISPPSDWTPVDDAIRRLHDFEWLVFSST 299
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ H I AIG +A + + A+ +VE
Sbjct: 300 NGVRYFLDRLFASGEDLRAVGHLHIAAIGPGTADMLAKYHLKADVIPA---EYRAESLVE 356
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
T ++ + L + I Y S D + +
Sbjct: 357 ALQATTDRQRFLLPRASRGRDVLPTGLAAGGGEVTEIVVYQSDDCMTLSPEIIEAWDDQP 416
Query: 169 A--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
++ + + L F+ +S + A+ + A ++
Sbjct: 417 IDYVIVTSSAIARATVRLLGARAQQTKFVSISPITSDALREAGVEPNIEAAVYTMDGIVA 476
Query: 227 LLPLR 231
L
Sbjct: 477 ALQQH 481
>gi|192288688|ref|YP_001989293.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
TIE-1]
gi|192282437|gb|ACE98817.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
TIE-1]
Length = 248
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 90/242 (37%), Gaps = 14/242 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP T + ++ GY ++ P+ F Y + +TS+ +L
Sbjct: 1 MALLVTRPQPDGDATAKALRAKGYDVLLAPMLRFEPVPFP--DDPDAHYTGVIVTSANAL 58
Query: 61 STLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ-KVLFTP 115
L P+FA+G+ +A A+ GF+ + ++ L I + +
Sbjct: 59 RALDDQPVLARLLKLPLFAVGKHTARKAQDAGFSDVIVADGDAAKLRIKIGDSLRGTDKR 118
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFY 173
L+YL G + L E + + Y + + + +L Y
Sbjct: 119 AGALLYLAGADLSRDLAGELREDGFDVVMQTAYRMVPLPSLPEDVCDAFAANRIEAVLHY 178
Query: 174 ARSSVLYFFSLPLPAKISAAFLCL-----SNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R S F + I + L + S ++ + + N V VA P E +LL+ L
Sbjct: 179 SRRSARAFIDATRTSGIEISALAIPQCCLSEAVSEVVREAGANQVMVARKPDEKALLEAL 238
Query: 229 PL 230
Sbjct: 239 DR 240
>gi|39933333|ref|NP_945609.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
CGA009]
gi|39652958|emb|CAE25700.1| putative UROPORPHYRINOGEN-III synthase [Rhodopseudomonas palustris
CGA009]
Length = 248
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 14/242 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP T + ++ GY ++ P+ F Y + +TS+ +L
Sbjct: 1 MALLVTRPQPDGDATAKALRAKGYDVLLAPMLRFEPVPFP--DDPDAHYTGVIVTSANAL 58
Query: 61 STLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV-LFTP 115
L P+FA+G+ +A A+ GF+ + ++ L I +
Sbjct: 59 RALDDQPVLARLLKLPLFAVGKHTARKAQDAGFSDVIVADGDAAKLRIKIRDTFSGKDKR 118
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFY 173
L+YL G + L E + + Y + + + +L Y
Sbjct: 119 AGALLYLAGADLSRDLAGELREDGFDVVMQTAYRMVPLPSLPADVCDAFAANRIEAVLHY 178
Query: 174 ARSSVLYFFSLPLPAKISAAFLCL-----SNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R S F + I + L + S ++ + + N V VA P E +LL+ L
Sbjct: 179 SRRSARAFIDATRTSGIEISALAIPQCCLSEAVSEVVREAGANQVMVARKPDEKALLEAL 238
Query: 229 PL 230
Sbjct: 239 DR 240
>gi|304436299|ref|ZP_07396277.1| possible uroporphyrinogen-III synthase [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304370704|gb|EFM24351.1| possible uroporphyrinogen-III synthase [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 506
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 30/243 (12%), Positives = 66/243 (27%), Gaps = 16/243 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-----QQSYGAIAITS 56
I++TR +A EK+ +G V P+ + +S Q Y + TS
Sbjct: 259 RILVTRARAQASALTEKLTALGASCVEAPVIRIVPPSDSYAGLDSAIGKLQDYHWVIFTS 318
Query: 57 SESLSTLPANFCRHTPIFAIGEA-------SACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ A +A R + + ++
Sbjct: 319 VNGVEHFFARLHHAGKDARALGYAKIAVIGTATRDRLRTYGIEADLVPQEFRAEAVVDAL 378
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--A 167
+ + P+ ++ + + L H + V Y + + + +
Sbjct: 379 RPILPPRAHILLPRAQEARDVLPESLSAHGATVDVAAAYETVPETEHGEELATKMMDGAF 438
Query: 168 DAILFYARSSVLYFFSLPLP--AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D + F + S+V + C+ A + + A L+
Sbjct: 439 DYVTFTSSSTVKNLVRMLGNITPLQHTKIACIGPVTAETVKSYALVPAMTAMTYTIDGLV 498
Query: 226 KLL 228
+
Sbjct: 499 DCI 501
>gi|297563291|ref|YP_003682265.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847739|gb|ADH69759.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 562
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 80/256 (31%), Gaps = 25/256 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y +A T
Sbjct: 284 RVLVPRTKEQAAALSDQLRGYGAVPEEVPTISVEPPRTPQQMERAVRGLVTGRYQWVAFT 343
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S ++ + + + +GEA+A R+ G + + + ++
Sbjct: 344 SVNAVRAIRERLESYGLDARAFAGVKVAVVGEATARAVREFGIQPDLAPPEEEQSSSGLV 403
Query: 107 VEQKVLF---TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
P + ++ L + + + Y + A P ++
Sbjct: 404 SVWPPYDAEIDPIERVLLPRADIATETLSAGLDKLGWEVDDVTAYRTVRAAPPPAPVREA 463
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+LF + S+V + + + V VA
Sbjct: 464 IKGGGFDAVLFTSSSTVRNLVGIAGKPHNTTVIAVIGPETERTAIEFGLRVDVVAPKASV 523
Query: 222 TSLLKLL-----PLRR 232
++L + L RR
Sbjct: 524 SALAQALSEYGAEKRR 539
>gi|68536994|ref|YP_251699.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium jeikeium K411]
gi|68264593|emb|CAI38081.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium jeikeium K411]
Length = 628
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 76/247 (30%), Gaps = 20/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A ++ G IPV +P R V + Y I TS
Sbjct: 349 VLVPRAKNQAGPMSTRLASHGAIPVEVPTISVEPPRSPVQMERAIKGLVDGRYHWIVFTS 408
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ + + A+G ++ + G T KD++ N A ++
Sbjct: 409 VNAVKAVWEKLREFGLDARALAGVRVAAVGPKTSQAVKDLGITPELLPKDDARNAAGLVE 468
Query: 108 EQKVLFTP---QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ D LIE + + Y + A P +++++
Sbjct: 469 VFPPHDPDLDLVDRVLLPRADIATDVLVDGLIELGWDVEDVVAYRTVRAAPPSPEIRDMI 528
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ A V +
Sbjct: 529 KTGGFDAVCFTSSSTVKNLVGIAGKPHARTIIACIGPMAAQTAREHGLRVDVMPEAAGVP 588
Query: 223 SLLKLLP 229
L+ L
Sbjct: 589 ELVDALA 595
>gi|126433282|ref|YP_001068973.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Mycobacterium sp. JLS]
gi|126233082|gb|ABN96482.1| uroporphyrinogen-III C-methyltransferase [Mycobacterium sp. JLS]
Length = 554
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 73/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A +K+ G +P+ +P R + + + TS
Sbjct: 287 VLVPRTKDQAGEMSDKLVGHGALPIEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 346
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +G+A+A R G +L
Sbjct: 347 TNAVRAVWEKFNEFGLDARAFSGVKIACVGQATAERVRAFGINPELVPTGEQSSLGLLDE 406
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + + +++
Sbjct: 407 FPPYDDIFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPASTREMIK 466
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 467 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAAEFGLRVDVQPEVAAVGP 526
Query: 224 LLKLLPLR 231
L++ L
Sbjct: 527 LVEALAEH 534
Score = 38.3 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 419 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPASTREMIKTGGFDAVCFTSS 478
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + + IG +A A + G + ++ L + + E
Sbjct: 479 STVRNLVGIAGKPHARTIVACIGPKTAETAAEFGLRVDVQPEVAAVGPLVEALAEHAARL 538
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 539 RAEGALPPPRKKSRR 553
>gi|108797658|ref|YP_637855.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Mycobacterium sp. MCS]
gi|119866745|ref|YP_936697.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Mycobacterium sp. KMS]
gi|108768077|gb|ABG06799.1| uroporphyrinogen-III C-methyltransferase [Mycobacterium sp. MCS]
gi|119692834|gb|ABL89907.1| uroporphyrinogen-III C-methyltransferase [Mycobacterium sp. KMS]
Length = 554
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 73/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A +K+ G +P+ +P R + + + TS
Sbjct: 287 VLVPRTKDQAGEMSDKLVGHGALPIEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 346
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +G+A+A R G +L
Sbjct: 347 TNAVRAVWEKFNEFGLDARAFSGVKIACVGQATAERVRAFGINPELVPTGEQSSLGLLDE 406
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + + +++
Sbjct: 407 FPPYDDIFDPVNRVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPASTREMIK 466
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 467 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAAEFGLRVDVQPEVAAVGP 526
Query: 224 LLKLLPLR 231
L++ L
Sbjct: 527 LVEALAEH 534
Score = 38.3 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + + + + A+ TSS
Sbjct: 419 RVLLPRADIATETLAEGLRERGWEIEDVTAYRTVRAAPPPASTREMIKTGGFDAVCFTSS 478
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + + IG +A A + G + ++ L + + E
Sbjct: 479 STVRNLVGIAGKPHARTIVACIGPKTAETAAEFGLRVDVQPEVAAVGPLVEALAEHAARL 538
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 539 RAEGALPPPRKKSRR 553
>gi|284006593|emb|CBA71854.1| uroporphyrinogen-III synthase [Arsenophonus nasoniae]
Length = 242
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 38/240 (15%), Positives = 70/240 (29%), Gaps = 16/240 (6%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSESL 60
+TRP + ++I+ +G PL I E LA + + S ++
Sbjct: 2 VTRPNPSGEKLVQRIRSLGKKAFHAPLIKIIPGNELALLPTKLAKLTNGDRVFFLSPNAV 61
Query: 61 STLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + S A + ++ +
Sbjct: 62 WHANSALHLTGRKWPDTLSYYGIGHSTASAFHQLTNLPIQLSQKGETSETLLELPGLQSL 121
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K + L G L + +CY Q I Y + Q A+ I+
Sbjct: 122 LGKKSLLLRGNGGRELLATTLKSRGSHIDYCECYQRQPIKYDRQIFQLQWQQANIRTIIV 181
Query: 173 YARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + F+L P +S + +S +AS V VA +L++ L
Sbjct: 182 TSGEMLHLLFNLITDDVKPWFLSRHLIVVSERLASTAYQLGWQSVKVAKSANNDALIQAL 241
>gi|270264250|ref|ZP_06192517.1| uroporphyrinogen-III synthase [Serratia odorifera 4Rx13]
gi|270041899|gb|EFA14996.1| uroporphyrinogen-III synthase [Serratia odorifera 4Rx13]
Length = 246
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 76/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++ +G + PL F R+ L + + S
Sbjct: 1 MTILVTRPSPFGEQLVSRLRALGRVAYHAPLIDFAPGRDLPKLPQALQQLNDGDLVFVVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFH------GKDNSINLAKIIVEQK 110
S++ + R + + R G +++
Sbjct: 61 QHSVNYANSVIGRAGLTWPARLTYYAIGRATGLAMHRISSLPVEYPREQQISETLLLLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G D L E + +CY + Y + Q A
Sbjct: 121 LQKLDGKQALILRGNGGRELLGDRLSERGANVSYYECYQRSPVHYDGSEQSAHWQRAGVD 180
Query: 170 -ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S +A+ +++ VA +
Sbjct: 181 TLVVTSGEMLQQLYTLVPDYYRSSWLLRCRLVVVSERLATLAQELGWSMIRVADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LIRALQ 246
>gi|15828302|ref|NP_302565.1| uroporphyrin-III C-methyltransferase [Mycobacterium leprae TN]
gi|221230779|ref|YP_002504195.1| putative uroporphyrin-III C-methyltransferase [Mycobacterium leprae
Br4923]
gi|13093995|emb|CAC31936.1| possible uroporphyrin-III C-methyltransferase [Mycobacterium
leprae]
gi|219933886|emb|CAR72518.1| possible uroporphyrin-III C-methyltransferase [Mycobacterium leprae
Br4923]
Length = 563
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 71/248 (28%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + + TS
Sbjct: 296 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 355
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +GEA+A R G + +L
Sbjct: 356 TNAVRAVWEKFGEFGLDARAFSGVKIACVGEATADRVRAFGISPELVPAGEQSSLGLLDE 415
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L + + Y + A P + +++
Sbjct: 416 FPPYDSVFDPVNRVLLPRADIATETLAEGLRGCGWEIEDVTAYRTVRAAPPPAATREMIK 475
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 476 TGGFDAVCFTSSSTVRNLVGIAGKPHARTVIACIGPKTAETASEFGLRVDVQPETAAVGP 535
Query: 224 LLKLLPLR 231
L+ L
Sbjct: 536 LVDALAEH 543
>gi|298530510|ref|ZP_07017912.1| uroporphyrin-III C-methyltransferase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509884|gb|EFI33788.1| uroporphyrin-III C-methyltransferase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 510
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 75/247 (30%), Gaps = 23/247 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR ++A E+++++G P + ++ Y + TS
Sbjct: 255 VVVTRAREQASGLLEQLRELGACCYEFPTIEIQSLPDYSDVQQAISHLSGYDWLVFTSVN 314
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ A R + AIG A+A +G F +
Sbjct: 315 GVLYFWAELERAGLDSRALGGRKVAAIGPATAQALEHRGIRPDFVPDKYVAESVVQGLLD 374
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ K ++ K L + + V+ Y + ++ +Q
Sbjct: 375 LGVQG--KKVLIPRAKVAREVLPQELEKAGADVHVLPVYQTGLAQESGQSILEAMQEGSI 432
Query: 170 --ILFYARSSVLYFFSLPLPAK------ISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
I F + S+V FFSL P + +C+ A + V
Sbjct: 433 SYITFTSSSTVENFFSLVQPGEVARHQDQGLRLVCIGPVTAGTLNGFGLEADIVPEDYTI 492
Query: 222 TSLLKLL 228
L+ +L
Sbjct: 493 PGLVNVL 499
>gi|261867395|ref|YP_003255317.1| uroporphyrinogen-III synthase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412727|gb|ACX82098.1| uroporphyrinogen-III synthase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 248
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 74/244 (30%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M +++TRP ++ + + + K G + + +PL E L ++ + S
Sbjct: 1 MAVLVTRPDERGQQLVDMLAKAGVVAIHLPLFRIESGAELNELPNKFAQLKNGDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + H N ++
Sbjct: 61 KSAVDFAFKTLTATGFVWRRDLHYFTVGQGTAQYFAATTEMPVHYPTAQENSEGLLQLSA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K ++ L G F + + + ++CY + I Y ++ + A
Sbjct: 121 MRDLSDKTVLILRGNGGRELFAEQAQQRGASVETVECYRREPIVYNNAEQTSICKRAGIQ 180
Query: 170 -ILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + + + + +S IA A V ++ +L
Sbjct: 181 TIVATSAEILTQLVDFVPQNEHNWLKSCQLITVSERIAHLAEALGWKNVVISPRADNQTL 240
Query: 225 LKLL 228
L+ L
Sbjct: 241 LQTL 244
>gi|16762197|ref|NP_457814.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143686|ref|NP_807028.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213029667|ref|ZP_03344114.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213052023|ref|ZP_03344901.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213416719|ref|ZP_03349863.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213425400|ref|ZP_03358150.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213649585|ref|ZP_03379638.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865138|ref|ZP_03387257.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289825621|ref|ZP_06544799.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25512549|pir||AE0920 uroporphyrinogen III synthase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504501|emb|CAD09383.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139321|gb|AAO70888.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 246
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S++ A R + + LA + ++ +
Sbjct: 61 QHSVAFAHAQLQRDGRNWPASPRYFSIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTVRGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|260579338|ref|ZP_05847220.1| uroporphyrinogen-III synthase [Corynebacterium jeikeium ATCC 43734]
gi|258602467|gb|EEW15762.1| uroporphyrinogen-III synthase [Corynebacterium jeikeium ATCC 43734]
Length = 628
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 75/247 (30%), Gaps = 20/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A ++ G IPV +P R V + Y I TS
Sbjct: 349 VLVPRAKNQAGPMSARLASHGAIPVEVPTISVEPPRSPVQMERAIKGLVDGRYHWIVFTS 408
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI-- 105
++ + + A+G ++ + G T KD++ N A +
Sbjct: 409 VNAVKAVWEKLGEFGLDARALAGVRVAAVGPKTSQAVKDLGITPELLPKDDARNAAGLVD 468
Query: 106 -IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ D LIE + + Y + A P +++++
Sbjct: 469 VFPPHDPDLDLVDRVLLPRADIATDVLVDGLIELGWDVEDVVAYRTVRAAPPSPEIRDMI 528
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + C+ A V +
Sbjct: 529 KTGGFDAVCFTSSSTVKNLVGIAGKPHARTIIACIGPMAAQTAREHGLRVDVMPEAAGVP 588
Query: 223 SLLKLLP 229
L+ L
Sbjct: 589 ELVDALA 595
>gi|89894970|ref|YP_518457.1| hypothetical protein DSY2224 [Desulfitobacterium hafniense Y51]
gi|89334418|dbj|BAE84013.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 504
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 70/247 (28%), Gaps = 20/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
I++TR +A + I+ +G P P + R+ L + + + TS
Sbjct: 256 RIIVTRARHQASALSQGIEDLGGEPWEFPAIEIVPPRDPQPLIQAIKNLKRFEWLIFTSV 315
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + AIG A+ ++ F ++ KII
Sbjct: 316 NGVEEFFKVLMEQGRDVRDLAGMDVVAIGPATRDALEKRCLKVSFVPEEYRA--EKIIEG 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ--DIAYPETTMKNLLQN 166
P + ++ + + L + + Y + + E +
Sbjct: 374 LASRVLPGQSVLLARAEEARDILPESLKALGADVWDVPTYRTVLGNANKEELLKLLEEKA 433
Query: 167 ADAILFYARSSVLYFFSLP---LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
A+ F + S+V F L + + ++ A
Sbjct: 434 VSAVTFTSSSTVRNFLQLIDGRQSLLDGVKLYSIGPITSKTAQEFGLSIYREAKQYTIKG 493
Query: 224 LLKLLPL 230
LL+ L
Sbjct: 494 LLETLAR 500
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 40/139 (28%), Gaps = 8/139 (5%)
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
L + + + + +I + + + + P+ +
Sbjct: 239 QLREKLQWFEKRPLFGQRIIVTRARHQASALSQGIEDLGGEPWEFPAIEIVPPRDPQPLI 298
Query: 161 KN--LLQNADAILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNV 212
+ L+ + ++F + + V FF + + + + A+ V
Sbjct: 299 QAIKNLKRFEWLIFTSVNGVEEFFKVLMEQGRDVRDLAGMDVVAIGPATRDALEKRCLKV 358
Query: 213 VTVACFPKETSLLKLLPLR 231
V + +++ L R
Sbjct: 359 SFVPEEYRAEKIIEGLASR 377
>gi|38233016|ref|NP_938783.1| putative uroporphyrin-III C-methyltransferase [Corynebacterium
diphtheriae NCTC 13129]
gi|38199275|emb|CAE48906.1| Putative uroporphyrin-III C-methyltransferase [Corynebacterium
diphtheriae]
Length = 556
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 68/250 (27%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +A +I G I +P R L Y + T
Sbjct: 279 RVLVPRAKDQAGPMSSRIAAYGAIAQEVPTISVEPPRNPAQLERAIKGIVEGRYQWVVFT 338
Query: 56 SSESLSTLPANFC------------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
S ++ + + A A+ + N+ +
Sbjct: 339 SVNAVKAVREKIVSFGLDSRAFAGVHIAAVGAKTAAAIREFGITPELIPPRKEHNAAGMV 398
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ P ++ D L+ + + Y + A P ++++
Sbjct: 399 SVFPNYVEGLDPVGRVLLPRADIATDVLVDGLVNLGWEVDDVVAYRTVRAAPPSAEVRDM 458
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ + DA+ F + S+V + C+ A+ V +
Sbjct: 459 IKSGDFDAVCFTSASTVRNLVGIAGKPHARTIIACIGPMTAAEAEKQGLRVDVIPEVANV 518
Query: 222 TSLLKLLPLR 231
+L+ L
Sbjct: 519 AALVDALAEH 528
>gi|296327548|ref|ZP_06870094.1| porphyrin biosynthesis protein HemD [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155374|gb|EFG96145.1| porphyrin biosynthesis protein HemD [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 485
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 77/235 (32%), Gaps = 12/235 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A+ E I K G IPV +P + ++ L + Y AI S +
Sbjct: 253 KILVTRDKKQAVEMSENISKRGGIPVELPFIEIENL--NIDLKDLEKYKAILFNSPNGVK 310
Query: 62 TLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
N + I A+G + + + F N + K+ E
Sbjct: 311 AFFENIKDVRCLANIKIGAVGVKTKEILEKYKIVPDFVP--NEYLVDKLAEEAVKYTNEN 368
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
++ + + Y +K I Y ++ + + L++ D I F + S
Sbjct: 369 DNILIVTSDISPCDTDKYNSLYKRNYEKIVAYNTKKLKVDREKVLETLKDIDIITFLSSS 428
Query: 177 SVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+V F+ + + I V A LL ++
Sbjct: 429 TVEAFYENLDGDFFILGDKKIASIGPMTSETIKRLGMKVDYEAEKYTADGLLDVI 483
>gi|255658553|ref|ZP_05403962.1| uroporphyrinogen III synthase/methyltransferase [Mitsuokella
multacida DSM 20544]
gi|260849357|gb|EEX69364.1| uroporphyrinogen III synthase/methyltransferase [Mitsuokella
multacida DSM 20544]
Length = 508
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 72/247 (29%), Gaps = 23/247 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-----SVFLAMQQSYGAIAITSS 57
+++TR +A + ++++G + P + +A SY + TS+
Sbjct: 259 VLVTRARSQASKLTACLEELGARVIEKPAIAIAVPDDGYAAVDAAIAKLDSYQWLIFTST 318
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + AIG+ +A + G ++ I+
Sbjct: 319 NGVERFMQRLFAAGKDVRALGYAKVAAIGQTTAKKLQSYGICADVVPQEFRA--EGILES 376
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-- 166
K P ++ + L E + V+ Y + E L +
Sbjct: 377 LKGKLPPHAKILLPRAAVAREILPEKLREQGAEVDVVPVYQTVMAETSEEERAALREELE 436
Query: 167 ---ADAILFYARSSVLYFFSLPL--PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
D + F + S+V+ L C+ A VA
Sbjct: 437 NGAIDFVTFTSSSTVVNLVKLLGGIEPLKGVKTACIGPVTAETARKHGIEPTIVASRYTI 496
Query: 222 TSLLKLL 228
L++ +
Sbjct: 497 EGLVEAM 503
>gi|169631070|ref|YP_001704719.1| uroporphyrin-III C-methyltransferase [Mycobacterium abscessus ATCC
19977]
gi|169243037|emb|CAM64065.1| Possible Uroporphyrin-III C-methyltransferase [Mycobacterium
abscessus]
Length = 549
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 72/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A +K+ G +PV +P R + Y + TS
Sbjct: 282 VLVPRTKDQAGEMSDKLVGYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRYQWVVFTS 341
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINL--AKI 105
+ ++ + F I +G+A+A R G +L
Sbjct: 342 TNAVRAVWEKFAEFGLDARAFSGVKIACVGQATADKVRAFGINPELVPAGEQSSLGLLDE 401
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L E + + Y + A P + +++
Sbjct: 402 FPPYDDVFDPVNRVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRAAPPAAQTREMIK 461
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + C+ A V
Sbjct: 462 TGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAVEFGLRVDVQPETAAVGP 521
Query: 224 LLKLLPLR 231
L++ L
Sbjct: 522 LVEALAEH 529
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E +++ G+ + + ++ + + A+ TSS
Sbjct: 414 RVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRAAPPAAQTREMIKTGGFDAVCFTSS 473
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + + IG +A A + G + ++ L + + E
Sbjct: 474 STVRNLVGIAGKPHARTIVACIGPKTAETAVEFGLRVDVQPETAAVGPLVEALAEHAARL 533
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 534 RTEGALPPPRKKSRR 548
>gi|322613017|gb|EFY09968.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617395|gb|EFY14295.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625613|gb|EFY22435.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627036|gb|EFY23829.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631248|gb|EFY28011.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638281|gb|EFY34980.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642783|gb|EFY39370.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646975|gb|EFY43477.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650362|gb|EFY46775.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656347|gb|EFY52641.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657572|gb|EFY53842.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665983|gb|EFY62164.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666722|gb|EFY62899.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671035|gb|EFY67165.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679258|gb|EFY75310.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681662|gb|EFY77689.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686011|gb|EFY81999.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323192637|gb|EFZ77865.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196503|gb|EFZ81653.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203745|gb|EFZ88766.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323205380|gb|EFZ90354.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323210749|gb|EFZ95625.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215917|gb|EGA00650.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221410|gb|EGA05828.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227572|gb|EGA11728.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231757|gb|EGA15868.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236172|gb|EGA20249.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239591|gb|EGA23639.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244313|gb|EGA28321.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249590|gb|EGA33502.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250318|gb|EGA34204.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256525|gb|EGA40256.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259777|gb|EGA43410.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265185|gb|EGA48683.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268386|gb|EGA51858.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 246
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 73/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLTTLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPASPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|205354498|ref|YP_002228299.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205274279|emb|CAR39299.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629632|gb|EGE35975.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 246
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPASPRYSTIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPEWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|253582656|ref|ZP_04859877.1| uroporphyrin-III C-methyltransferase [Fusobacterium varium ATCC
27725]
gi|251835526|gb|EES64066.1| uroporphyrin-III C-methyltransferase [Fusobacterium varium ATCC
27725]
Length = 488
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 74/234 (31%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR ++A +KI+KMG I V +P ++ M Q Y AI S +
Sbjct: 255 KILVTRDKRQAGEFSDKIEKMGGIAVELPFIEIESTLGTISKDMLQDYSAILFNSPNGVR 314
Query: 62 TLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
H I A+G + + F + ++ + P
Sbjct: 315 EFMNKIDDIRIFSHLKIGAVGSKTKEILESYKLKADFMPDEYLVSKLAELSLDYT--KPG 372
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
++ + E + + Y ++ I + + L + + F + S
Sbjct: 373 DKILIITSDISPCDTEKLNSIYDREFHKMIAYNTKKIIREKDEVLKTLSKIEIVTFLSSS 432
Query: 177 SVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+V F+ S F + + + +V A +L+
Sbjct: 433 TVDAFYESIGKDIESVKNKKFASIGPVTSDTMRKYGFSVDYEATVYDVNGILEA 486
>gi|291615714|ref|YP_003518456.1| HemD [Pantoea ananatis LMG 20103]
gi|291150744|gb|ADD75328.1| HemD [Pantoea ananatis LMG 20103]
Length = 242
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 68/241 (28%), Gaps = 13/241 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP A ++ G +PL F + LA + + + S
Sbjct: 1 MTILVTRPEPAAAELVSRLHAQGKQAWSLPLIEFAPGNDLLQLPATLATLKRGDLVFLLS 60
Query: 57 SESLSTLPANFCRHTPIFAIG--EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + S LA ++I +
Sbjct: 61 QQVIHFAQHAIKAWPADVDYYAIGRSTALAFHTISGLQVTYPHAHETSEELIKLATLQQI 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILF 172
K + L G + L+ + +CY Y + +N ++
Sbjct: 121 AGKHALILRGNQGRELLSETLVARGAQVTYAECYQRCQKHYDGAIEGRRWRDRNIHTLVV 180
Query: 173 YARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + +SL + + +S +AS + VA +LL+
Sbjct: 181 TSGEMLHQLYSLFPEVDREEWLLRCRLVVVSERLASLAADLGWQTIQVADGADNDALLRT 240
Query: 228 L 228
L
Sbjct: 241 L 241
>gi|329297027|ref|ZP_08254363.1| Uroporphyrinogen-III synthase [Plautia stali symbiont]
Length = 246
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 77/245 (31%), Gaps = 17/245 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP A +++ G + PL F R+ + LA Q + + S
Sbjct: 1 MTILVTRPEPAASELVARLRSQGKLAWSYPLIEFTPGRDLPQLPLKLAALQPGELVFLLS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + + + S LA +++ +
Sbjct: 61 QQVVHFAQPALQQQRSAWPAFLDYYAIGHSTALALHTVSNLKVDYPHARETSEELVRLNR 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNAD 168
+ K + L G P + LI ++ +CY + Y + +
Sbjct: 121 LQQVSGKRALILRGSPGRELLAETLIARGADVQYCECYQRCEKQYDGAIEGRRWRDRGIT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + F+L P + L +S +A+ + VA +
Sbjct: 181 TLVVTSGEMLQQLFALFPPIDRREWLLHCRLLVVSERLATQAAELGWQEIEVADGADNDA 240
Query: 224 LLKLL 228
LL+ L
Sbjct: 241 LLRAL 245
>gi|239827916|ref|YP_002950540.1| uroporphyrinogen-III synthase [Geobacillus sp. WCH70]
gi|239808209|gb|ACS25274.1| Uroporphyrinogen-III synthase [Geobacillus sp. WCH70]
Length = 266
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 12/236 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
+++TR ++A EK++K G P+ +PL + +Y + TS+
Sbjct: 10 VLVTRGKEQAKAFSEKLRKAGATPIEIPLISISPSSHREEIERCVRQLPNYDWLIFTSAN 69
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK-IIVEQKVLFTPQK 117
+ + TP+ + A + S +A+ +I K L P+
Sbjct: 70 GVRFFFPFVKKETPLPKVAVVGKKTAAALKTYGVSPAAIPSEFVAEGMIEALKPLVKPRD 129
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYAR 175
++ + G D LI + + Y + + + LL+ D I F +
Sbjct: 130 RVLLVKGNLARPVLRDALINMGADITDLIVYETLMNESGKEQLLYLLRERKLDVITFTSS 189
Query: 176 SSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F + I+ C+ + V ++K
Sbjct: 190 STVQSFIRMMEEEDIASLLSGCVIACIGPITKETAEKAGLAVHICPDEYTIDDMIK 245
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%)
Query: 158 TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
L N D ++F + + V +FF + A+A+ + +
Sbjct: 51 ERCVRQLPNYDWLIFTSANGVRFFFPFVKKETPLPKVAVVGKKTAAALKTYGVSPAAIPS 110
Query: 218 FPKETSLLKLLP 229
+++ L
Sbjct: 111 EFVAEGMIEALK 122
>gi|168263174|ref|ZP_02685147.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205348295|gb|EDZ34926.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 246
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLAENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPASPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|157368426|ref|YP_001476415.1| uroporphyrinogen-III synthase [Serratia proteamaculans 568]
gi|157320190|gb|ABV39287.1| Uroporphyrinogen-III synthase [Serratia proteamaculans 568]
Length = 246
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP + +++ +G + PL F + L + I S
Sbjct: 1 MTILVTRPSPSGEQLVSRLRALGRVAYHAPLIDFAPGGDLPKLPQALQQLNDGDLVFILS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S+S + + + LA + + +++
Sbjct: 61 QHSVSYANSVMGRVGLPWPARLAYYAIGRNTALAMHRISSLPVEYPREQEISETLLLLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G + L E + +CY + Y + Q A
Sbjct: 121 LQNLDGKQALILRGNGGRELLGNSLSERGAAVSYYECYQRSPVHYDGSEQSAHWQRAGVD 180
Query: 170 -ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S +A+ + + VA +
Sbjct: 181 TLVVTSGEMLQQLYTLVPDYYRSSWLLRCRLVVVSERLATLAQELGWSTIRVADNADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LIRALQ 246
>gi|168238391|ref|ZP_02663449.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734076|ref|YP_002116869.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248146|ref|YP_002148863.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197263065|ref|ZP_03163139.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|200387451|ref|ZP_03214063.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|224585756|ref|YP_002639555.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912943|ref|ZP_04656780.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|194709578|gb|ACF88799.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197211849|gb|ACH49246.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197241320|gb|EDY23940.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288744|gb|EDY28119.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|199604549|gb|EDZ03094.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|224470284|gb|ACN48114.1| uroporphyrinogen-III synthetase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 246
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPASPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|168233865|ref|ZP_02658923.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194468618|ref|ZP_03074602.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194454982|gb|EDX43821.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332077|gb|EDZ18841.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 246
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLAENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPVAPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|16767208|ref|NP_462823.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161617052|ref|YP_001591017.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167553884|ref|ZP_02347628.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167993870|ref|ZP_02574963.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|17865664|sp|Q9L6Q3|HEM4_SALTY RecName: Full=Uroporphyrinogen-III synthase; Short=UROS; AltName:
Full=Hydroxymethylbilane hydrolyase [cyclizing];
AltName: Full=Uroporphyrinogen-III cosynthase
gi|6960264|gb|AAF33454.1| 83% identity with E. coli uroporphyrinogen-III synthase (HEMD)
(SP:P09126) [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16422501|gb|AAL22782.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161366416|gb|ABX70184.1| hypothetical protein SPAB_04885 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205321800|gb|EDZ09639.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205328170|gb|EDZ14934.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|261249061|emb|CBG26921.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996215|gb|ACY91100.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160453|emb|CBW19982.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915056|dbj|BAJ39030.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225456|gb|EFX50513.1| Uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323132285|gb|ADX19715.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332990773|gb|AEF09756.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 246
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPVAPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|311740972|ref|ZP_07714797.1| uroporphyrinogen III synthase/methyltransferase [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311303774|gb|EFQ79852.1| uroporphyrinogen III synthase/methyltransferase [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 573
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y I T
Sbjct: 295 RVLVPRTKEQAGPMSARLAGYGAIPQNVPTISIEPPRNPAQMDRAIKGIVEGRYKWIVFT 354
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S +++ + + A+G +A R KG N ++
Sbjct: 355 SVNAVTAVWDKIAQLGLDARDFAGVHLAAVGTKTAAAIRAKGMVPELLPHKKKQNAEGLL 414
Query: 107 ---VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ D L + + Y + A P ++++
Sbjct: 415 DVFPNFVEDIDAVGRVLLPRADIAADTLVDGLKALDWEVDDVVAYRTVRAAPPSAEIRDM 474
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ + +A V V
Sbjct: 475 IKTGGFDAVAFTSGSTVRNLVGIAGKPHQRTIIACIGPSARAAAEEMGLRVDVVPEVADV 534
Query: 222 TSLLKLLP 229
+L+ L
Sbjct: 535 PALVDALA 542
>gi|293393887|ref|ZP_06638194.1| uroporphyrinogen-III synthase [Serratia odorifera DSM 4582]
gi|291423714|gb|EFE96936.1| uroporphyrinogen-III synthase [Serratia odorifera DSM 4582]
Length = 245
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 77/245 (31%), Gaps = 17/245 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + +++ +G + PL F + L Q+ + + S
Sbjct: 1 MTILVTRPSPFGEQLVSRLRVLGRVAYHAPLIDFAPGGDLPILPQALQQQREGDLVFVLS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S++ + P + + LA + + +++
Sbjct: 61 QHSVNYANSVMGRAGLPWPTKPRYYAIGRNTALALHRITSLPVEFPQERQISETLLLLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G D L E + +CY + Y Q A
Sbjct: 121 LQKLDGKQAMILRGNGGRELLGDTLRERGANVSYYECYQRSPVHYDGAEQSAHWQRAGVD 180
Query: 170 -ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S +A+ + + VA +
Sbjct: 181 TLVVTSGEMLQQLYNLVPDYYRASWLLRCRLIVVSERLATQARDLGWSTIRVAENADNDA 240
Query: 224 LLKLL 228
L++ L
Sbjct: 241 LIRAL 245
>gi|172039906|ref|YP_001799620.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium urealyticum DSM 7109]
gi|171851210|emb|CAQ04186.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium urealyticum DSM 7109]
Length = 594
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 74/247 (29%), Gaps = 20/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ RP +A ++ G IPV +P R + Y + TS
Sbjct: 315 VLVPRPKAQAAPMSTRLASHGAIPVEVPTISVEPPRTPAQMERAIKNLVDGHYCWVVFTS 374
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGK---DNSINLAK 104
++ + A+G +A + G T K N+ +
Sbjct: 375 VNAVKATWEKLQDFGLDARALAGVRVAAVGPKTASAVQALGITPELLPKDDARNASGIVD 434
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ + ++ + L++ + + Y + A P +++++
Sbjct: 435 VFPARDPDLDLVDRVLLPRADIATEVLVEGLLKLGWKVDDVVAYRTVRAAPPAPEIRDMI 494
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ DA+ F + S+V + C+ A V +
Sbjct: 495 KSGGFDAVCFTSSSTVKNLVGIAGKPHSRTIIACIGPMAAQTAREHGLRVDVMPEVAGVP 554
Query: 223 SLLKLLP 229
L+ L
Sbjct: 555 ELVDALA 561
>gi|319440759|ref|ZP_07989915.1| uroporphyrin-III C-methyltransferase / uroporphyrinogen-III
synthase [Corynebacterium variabile DSM 44702]
Length = 604
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 77/250 (30%), Gaps = 20/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +A ++ G IP+ +P R + Y I T
Sbjct: 329 NVLVPRAKAQAGPMSTRLASHGAIPIEVPTISMEPPRSPAQMERAVKGLVDGRYQWIVFT 388
Query: 56 SSESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGK---DNSINLA 103
S +++ + + A+GE +A R G T K N+ L
Sbjct: 389 SVNAVNAVWEKLREFGLDARALAGVSVAAVGEKTAQAVRDLGITPELLPKAKARNAAGLV 448
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ P ++ D LI+ + + Y + A P ++++
Sbjct: 449 EVFPPYDEDLDPVDRVLLPRADIATDTLVDGLIDLGWSVEDVVAYRTVRAAPPSQDIRDM 508
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+++ DA+ F + S+V + C+ A V +
Sbjct: 509 IKSGGFDAVCFTSSSTVKNLVGIAGKPHTRTIIACIGPMAAKTAEEHGLRVDVMPEVAGV 568
Query: 222 TSLLKLLPLR 231
L+ L
Sbjct: 569 PELVDALAEH 578
>gi|56415792|ref|YP_152867.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|168822696|ref|ZP_02834696.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|198244848|ref|YP_002217870.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|207859143|ref|YP_002245794.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|56130049|gb|AAV79555.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197939364|gb|ACH76697.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205340932|gb|EDZ27696.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|206710946|emb|CAR35313.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|320088348|emb|CBY98108.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|326625657|gb|EGE32002.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 246
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPASPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPEWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|194446231|ref|YP_002043171.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194404894|gb|ACF65116.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 246
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLAENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPASPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPEWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|256026473|ref|ZP_05440307.1| uroporphyrinogen-III synthase [Fusobacterium sp. D11]
gi|289764484|ref|ZP_06523862.1| uroporphyrin-III C-methyltransferase [Fusobacterium sp. D11]
gi|289716039|gb|EFD80051.1| uroporphyrin-III C-methyltransferase [Fusobacterium sp. D11]
Length = 485
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 76/235 (32%), Gaps = 12/235 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR ++A+ E I K G IPV +P + ++ L + Y AI S +
Sbjct: 253 KILVTRDKRQAVEMSENISKRGGIPVELPFIEIENL--NIDLKDLEKYKAILFNSPNGVK 310
Query: 62 TLPANFCRHT-----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
N I A+G + + + F N + K+ E
Sbjct: 311 AFFENIKDMRCLANIKIGAVGIKTKEILEKYKIVPDFVP--NEYLVDKLAEEVVKYTDEN 368
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
++ + + Y +K + Y ++ + + L++ D + F + S
Sbjct: 369 DNILIVTSDISPCDTDKYNSLYKRNYEKVVAYNTKKLKVDREKVLETLKDVDILTFLSSS 428
Query: 177 SVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+V F+ + + I V A LL ++
Sbjct: 429 TVEAFYESLDGDFFILGDKKIASIGPMTSKTIRRLGMKVDYEAEKYTADGLLDVI 483
>gi|27375677|ref|NP_767206.1| uroporphyrinogen III synthase [Bradyrhizobium japonicum USDA 110]
gi|27348815|dbj|BAC45831.1| bll0566 [Bradyrhizobium japonicum USDA 110]
Length = 248
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 89/243 (36%), Gaps = 15/243 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++TRP T + ++ G++ ++ P+ F +Y AI +TS+ ++
Sbjct: 1 MSILVTRPHPDNEATADNLRARGHVVLLAPVLKFEPVAFHDESE--ANYSAIIVTSANAI 58
Query: 61 STLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII--VEQKVLFT 114
+ P+FA+GE +A AR GF ++ +S L + + +
Sbjct: 59 RAVAPQLQDLGLLKLPLFAVGEHTATAARDAGFAEVIIAGGDSAALRDTVVRSARDKVLK 118
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
+ L+YL G + L + Y + + +L
Sbjct: 119 KKSTLLYLAGADLSRDLGGELGTEGFNVVTQTTYRMAPVKVLPRDVCEGFAAHGIEAVLH 178
Query: 173 YARSSVLYFFSLPLPAKISAAFLCL-----SNNIASAIPASYKNVVTVACFPKETSLLKL 227
Y+R S F + + L + S +AS + + + V VA P E +L
Sbjct: 179 YSRRSARAFLDAARDEGVEISALAIPQCCLSETVASVLRDAGASQVLVAAKPDENALFDT 238
Query: 228 LPL 230
L
Sbjct: 239 LER 241
>gi|168244625|ref|ZP_02669557.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194450437|ref|YP_002047953.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194408741|gb|ACF68960.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205336519|gb|EDZ23283.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 246
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTKNDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRHWPASPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPEWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|204930333|ref|ZP_03221310.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320737|gb|EDZ05939.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 246
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTMADRLATLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPASPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|295837223|ref|ZP_06824156.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. SPB74]
gi|197699854|gb|EDY46787.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. SPB74]
Length = 555
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 71/238 (29%), Gaps = 19/238 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +++ ++++ G +P +P R + Y IA T
Sbjct: 274 KVLVPRTKEQSRALSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 333
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 334 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAKALIAFGVKPDLTPSGEQSAAGLLE 393
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 394 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 453
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
+ DA+LF + S+V + C+ A V +A P
Sbjct: 454 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMAPEPS 511
>gi|170718230|ref|YP_001785252.1| uroporphyrinogen III synthase HEM4 [Haemophilus somnus 2336]
gi|168826359|gb|ACA31730.1| Uroporphyrinogen III synthase HEM4 [Haemophilus somnus 2336]
Length = 246
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 72/245 (29%), Gaps = 16/245 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M ++ITRP ++ R E + K G + + +PL I +E L + S
Sbjct: 1 MAVLITRPGERGERLVEMLNKAGIMALHLPLISIIAGQELNRLPDKLQQLNCGDYVVAVS 60
Query: 57 SESLSTLPA------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + + + ++ +
Sbjct: 61 KNAVEYAQKTLSAVGFCWRSDLYYFTVGQRTAEYFASQIENSVYYPVEQESSEGLLNLPQ 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ + ++ L F + I + ++CY I Y E D
Sbjct: 121 MQDLQARNILILRANGGREFFTEQAILRGAKVETLECYQRMPIEYNKLEKISLCQRIGVD 180
Query: 169 AILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ ++ + Y L S + +S IA+ + + VA SL
Sbjct: 181 TIVVTSQEMLNYLVKLVPTNETGWLFSCRLVTVSQRIAAFAKSVGWTNIVVADKADNLSL 240
Query: 225 LKLLP 229
L
Sbjct: 241 FLALQ 245
>gi|317494823|ref|ZP_07953234.1| uroporphyrinogen-III synthase HemD [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917148|gb|EFV38496.1| uroporphyrinogen-III synthase HemD [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 246
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 69/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITS 56
M I++TRP +++ +G +PL F L S + S
Sbjct: 1 MSILVTRPSPAGEALVNRLRTLGRAAYHVPLIDFTPGSGLTTLPTQLQRLASGDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF------HGKDNSINLAKIIVEQK 110
++ R+ + + + R +++ +
Sbjct: 61 QHAVRYAHPYLQRNGMTWPRELSYFAIGRPTALRLHTASGLPVGYPRPPETSESLLLLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ K + L G + L + + + + +CY I Y Q
Sbjct: 121 LRDIAGKRALILRGNGGRELLAETLTQRGVNVTLCECYQRCAIHYNGAEQSAHWQRQGIS 180
Query: 171 LF--YARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + + L + + +S +A+ A + VA +
Sbjct: 181 TLVVTSGEMLQQLYDLVPDYDRIMWLLHCRLIVVSERLATLAQALGWKDIQVAESADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LIRALQ 246
>gi|288940051|ref|YP_003442291.1| Uroporphyrinogen III synthase HEM4 [Allochromatium vinosum DSM 180]
gi|288895423|gb|ADC61259.1| Uroporphyrinogen III synthase HEM4 [Allochromatium vinosum DSM 180]
Length = 251
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 73/237 (30%), Gaps = 12/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES-VFLAMQQSYGAIAITSSESLS 61
+++TRP +A I+ G + P + + +S+ + S ++
Sbjct: 12 VLVTRPAGQAEPLCRLIESAGGRAIRFPTIAIEPTHDPEATALLAESWDLLYFVSPNAVE 71
Query: 62 TLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
A + R + A+G +A G D ++ ++
Sbjct: 72 QAQALVADGTWPRVERVAAVGRGTARALEAAGRAPDLVPNDRYE-SEALLEMPELSDMRG 130
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF-YAR 175
+ ++ + G F + E +R + Y A + + + +
Sbjct: 131 RRVLIVRGVGGRGLFAQAMSERGAEVRFAEVYRRARPAVDVAPLLAHWREEVDFVMATSD 190
Query: 176 SSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+L L ++ + ++ A + VA ++S+++ L
Sbjct: 191 EVLLNLAELLGQEGQASLLATPLVVIAERTAQTARNLGFQTIRVAERADDSSIVRAL 247
>gi|189423572|ref|YP_001950749.1| uroporphyrinogen-III synthase [Geobacter lovleyi SZ]
gi|189419831|gb|ACD94229.1| Uroporphyrinogen-III synthase [Geobacter lovleyi SZ]
Length = 276
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 69/251 (27%), Gaps = 23/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR ++A ++Q+ G + V P + + + + +TS+
Sbjct: 16 RILVTRAAEQAAGFSRQLQQRGAVVVECPTIQLVPPEAWTAVDAAIQALSGFDWLILTSA 75
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + A+G +A Q G T ++
Sbjct: 76 NGVRFFFGRLQELGLAPAGLQSCKVCAVGPKTAEALTQLGITPDLIP--EQFTGEGVVAA 133
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ +++ L + Y + + + L+
Sbjct: 134 FHGHDLQGRRVLFPKADGARDLIPQQLRSRGAVVIDPVLYRNIIPQGLPDSARLALEQHQ 193
Query: 169 --AILFYARSSVLYFFSL------PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
A++F + S+V L A + + A +V
Sbjct: 194 LDAVVFSSPSTVRNLAQLTGGITRLQALLADLAVVSIGPVTTRACQELGLSVAVEPEQST 253
Query: 221 ETSLLKLLPLR 231
+L++ L
Sbjct: 254 LDALIRALEQH 264
>gi|168467649|ref|ZP_02701486.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195629948|gb|EDX48608.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 246
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPASPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRSAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPEWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|295399406|ref|ZP_06809388.1| Uroporphyrinogen III synthase HEM4 [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978872|gb|EFG54468.1| Uroporphyrinogen III synthase HEM4 [Geobacillus thermoglucosidasius
C56-YS93]
Length = 266
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 82/238 (34%), Gaps = 16/238 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
+++TR ++A EK+++ G IPV +PL + Y + TS+
Sbjct: 11 VLVTREKEQAKAFSEKLREAGAIPVEIPLIAISPSSHHEEIERCARQLSDYDWLVFTSAN 70
Query: 59 SLSTLPANFCRH---TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + +G+ +A + G + + +I K L P
Sbjct: 71 GVRFFFPFVKQKTLLPKVVVVGKKTAAALKAYGVSPAVVP--DEFVAEGVIEALKPLVKP 128
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFY 173
+ ++ + G D LI+ + + Y + + + LL+ D I F
Sbjct: 129 RDRVLLVKGNLARTVLRDALIDMGADVTDLIVYKTSMNEAGKERLLCLLREKKLDVITFT 188
Query: 174 ARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ S+V F + I+ A C+ + +V +++K
Sbjct: 189 SSSTVQSFLRMMEREDIASLLAGCAVACIGPITKETAEKAGLSVHICPSEYTIDAMIK 246
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 26/77 (33%)
Query: 153 IAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV 212
L + D ++F + + V +FF + + + A+A+ A +
Sbjct: 47 HHEEIERCARQLSDYDWLVFTSANGVRFFFPFVKQKTLLPKVVVVGKKTAAALKAYGVSP 106
Query: 213 VTVACFPKETSLLKLLP 229
V +++ L
Sbjct: 107 AVVPDEFVAEGVIEALK 123
>gi|254473245|ref|ZP_05086643.1| uroporphyrinogen-III synthase [Pseudovibrio sp. JE062]
gi|211957966|gb|EEA93168.1| uroporphyrinogen-III synthase [Pseudovibrio sp. JE062]
Length = 236
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 19/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++TRP +A +T +K+ MG+ ++ P+ F +V + AIA+TS++++
Sbjct: 1 MKILVTRPQPQADKTAQKLVAMGHEVIVEPMLSFQPL--TVNGDVAGDAKAIAVTSAKAV 58
Query: 61 STLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
L N +H P++++GEA+A A GF +I + +L ++I E+
Sbjct: 59 EALVFNGLVDKLQHLPLYSVGEATAKAAEASGFPKIICADGDVDSLGRLIAERN----QD 114
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYA 174
P+ Y R+ L + I R+++ Y ++L++ D LFY+
Sbjct: 115 GPVFYPAAVDRSGDLAGQLEQQGIACRMVEVYQMAAATGFSGKTRDLIEAGTLDCALFYS 174
Query: 175 RSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
++ F S+ K S LC+S +A + V A P E L +LL
Sbjct: 175 PRTIQIFLSISNLEKTTVFLNSMKALCVSKRVAEQAQSFG--EVFTAKTPSEDGLFELLS 232
>gi|294785255|ref|ZP_06750543.1| porphyrin biosynthesis protein HemD [Fusobacterium sp. 3_1_27]
gi|294486969|gb|EFG34331.1| porphyrin biosynthesis protein HemD [Fusobacterium sp. 3_1_27]
Length = 485
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 8/233 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A+ E I K G IPV +P + ++ L + Y AI S +
Sbjct: 253 KILVTRDKKQAVEMSENISKRGGIPVELPFIEIENL--TIDLKDLEKYKAILFNSPNGVK 310
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDN--SINLAKIIVEQKVLFTP-QKP 118
N + I + + ++ + D + L + E+ V +T
Sbjct: 311 AFFENIKDIRCLANIKIGTVGVKTKEILEKYKIVPDFVPNEYLVDKLAEEVVKYTNENDN 370
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ + + Y +K + + Y ++ + + L++ D I F + S+V
Sbjct: 371 ILIVTSDISPCDTDKYNSLYKRNYQKVVAYSTKKLKVDREKVLETLKDVDIITFLSSSTV 430
Query: 179 LYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+ + + I V A LL ++
Sbjct: 431 EAFYENLDGNFFILGDKKIASIGPMTSETIRRLGMKVDYEAEKYTADGLLDVI 483
>gi|34762658|ref|ZP_00143650.1| Uroporphyrin-III C-methyltransferase; UROPORPHYRINOGEN-III SYNTHASE
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27887679|gb|EAA24756.1| Uroporphyrin-III C-methyltransferase; UROPORPHYRINOGEN-III SYNTHASE
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 485
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 8/233 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A+ E I K G IPV +P + ++ L + Y AI S +
Sbjct: 253 KILVTRDKKQAVEMSENISKRGGIPVELPFIEIENL--TIDLKDLEKYKAILFNSPNGVK 310
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDN--SINLAKIIVEQKVLFTP-QKP 118
N + I + + ++ + D + L + E+ V +T
Sbjct: 311 AFFENIKDIRCLANIKIGTVGVKTKEILEKYKIVPDFVPNEYLVDKLAEEVVKYTNENDN 370
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ + + Y +K + + Y ++ + + L++ D I F + S+V
Sbjct: 371 ILIVTSDISPCDTDKYNSLYKRNYQKVVAYSTKKLKVDREKVLETLKDVDIITFLSSSTV 430
Query: 179 LYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+ + + I V A LL ++
Sbjct: 431 EAFYENLDGNFFILGDKKIASIGPMTSETIRRLGMKVDYEAEKYTADGLLDVI 483
>gi|255324253|ref|ZP_05365375.1| uroporphobilinogen-III synthase [Corynebacterium tuberculostearicum
SK141]
gi|255298769|gb|EET78064.1| uroporphobilinogen-III synthase [Corynebacterium tuberculostearicum
SK141]
Length = 573
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 71/248 (28%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y I T
Sbjct: 295 RVLVPRTKEQAGPMSARLAGYGAIPQNVPTISIEPPRNPAQMDRAIKGIVEGRYKWIVFT 354
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S +++ + + A+G +A R KG N ++
Sbjct: 355 SVNAVTAVWDKIAQLGLDARDFAGVHLAAVGTKTAAAIRAKGMVPELLPHKKKQNAEGLL 414
Query: 107 ---VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ D L + + Y + A P ++ +
Sbjct: 415 DVFPNFVEDIDAVGRVLLPCADIAADTLVDGLKALDWEVDDVVAYRTVRAAPPSAEIRAM 474
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ + +A V V
Sbjct: 475 IKTGGFDAVAFTSGSTVRNLVGIAGKPHQRTIIACIGPSARAAAEEMGLRVDVVPEVADV 534
Query: 222 TSLLKLLP 229
+L+ L
Sbjct: 535 PALVDALA 542
>gi|54027142|ref|YP_121384.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Nocardia farcinica IFM 10152]
gi|54018650|dbj|BAD60020.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Nocardia farcinica IFM 10152]
Length = 520
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 74/248 (29%), Gaps = 19/248 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G IP+ +P R + Y + TS
Sbjct: 252 VLVPRTKDQAAEMSERLVTHGAIPMEVPTIAVEPPRSPAQMERAVKGLVDGRYQWVVFTS 311
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAKI 105
+ ++ + F I +GEA+A R G + L
Sbjct: 312 TNAVRAVWEKFAEFGLDARAFSGVKIACVGEATADKVRSFGINPELVPSGEQSSEGLLAD 371
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F P ++ + L + + + Y + + P + +++
Sbjct: 372 FPPYDDVFDPVNRVLLPRADIATETLAEGLRDRGWEIDDVTAYRTVRASPPPAETREMIK 431
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+LF + S+V + C+ A V +
Sbjct: 432 TGGFDAVLFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAVEFGLRVDVQPEVAQVGP 491
Query: 224 LLKLLPLR 231
L++ L
Sbjct: 492 LVEALAEH 499
Score = 39.0 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 8/135 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+++ R E ++ G+ + + E+ + + A+ TSS
Sbjct: 384 RVLLPRADIATETLAEGLRDRGWEIDDVTAYRTVRASPPPAETREMIKTGGFDAVLFTSS 443
Query: 58 ESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLF 113
++ L + + IG +A A + G + + L + + E
Sbjct: 444 STVRNLVGIAGKPHARTIVACIGPKTAETAVEFGLRVDVQPEVAQVGPLVEALAEHAARL 503
Query: 114 TPQKPLIYLGGKPRN 128
+ L K R
Sbjct: 504 RAEGLLPPPRKKSRR 518
>gi|300087570|ref|YP_003758092.1| uroporphyrin-III C-methyltransferase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527303|gb|ADJ25771.1| uroporphyrin-III C-methyltransferase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 504
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 69/242 (28%), Gaps = 16/242 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSES 59
+++TR ++A +++ G +PV +P+ E + ++ + TS
Sbjct: 256 KVLVTRSRRQASDMSRELKARGALPVELPVISIETGDERALDEAIRRGAFDWVIFTSVNG 315
Query: 60 LSTLPA---------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + I AIG A+ +G + + A ++
Sbjct: 316 VEAFFNRLQAAGKDARWFAGGRIAAIGPATGAALENRGLRPDSMPEQFTA--AAVLAALS 373
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ-DIAYPETTMKNLLQNADA 169
++ + L + I Y ++ +
Sbjct: 374 DQQIEGMDILLPRADIAPPLLAEGLRNMGGKITEIAAYRTRGEAGVSAEAAGRAAAECRV 433
Query: 170 ILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
I F + S+V +F + C+ A+ V VA L+
Sbjct: 434 ITFCSSSTVEHFLKKVSVDVLPADTITACIGPVTAATAEKLGLKVDIVAAEHTIPGLVTA 493
Query: 228 LP 229
L
Sbjct: 494 LE 495
>gi|323699456|ref|ZP_08111368.1| uroporphyrin-III C-methyltransferase [Desulfovibrio sp. ND132]
gi|323459388|gb|EGB15253.1| uroporphyrin-III C-methyltransferase [Desulfovibrio desulfuricans
ND132]
Length = 504
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 23/245 (9%), Positives = 54/245 (22%), Gaps = 17/245 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+++TR ++A +++ G P + + Y + TS
Sbjct: 255 VIVTRAREQASGLVGVLREQGACVREFPTISVEPLDDYAEVETAILQLARYQWVVFTSVN 314
Query: 59 SLSTLPANFCRHTPIFAIGEAS-------ACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ I A + + ++
Sbjct: 315 GVRFFWRQLRAIGLDARIFGGMQIAAIGPATADELRTRGIEPDFIPDKYVAEHVVKGLLE 374
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADA 169
++ K L + V+ Y ++ + L +
Sbjct: 375 RGIQGSDVLIPRAKVAREVLPRELKAAGCNVTVLPVYETRLGQASGDEIMETLGAGDIRY 434
Query: 170 ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ F + S+V FF L + + + L+
Sbjct: 435 VTFTSSSTVENFFELVPADAFKNYPDVKIASIGPVTSDTVRKFGLTPAIEPEDYTIPGLV 494
Query: 226 KLLPL 230
L
Sbjct: 495 DALLK 499
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/186 (9%), Positives = 46/186 (24%), Gaps = 8/186 (4%)
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ +L + + + + + + +L + +
Sbjct: 190 ADTPVALVRWGTRCNQTSFVSDLEHVAEEAKARNWQAPSIIIVGGVCSLHDKLGWFEKKP 249
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET--TMKNLLQNADAIL 171
K +I + + L E +R + + T L ++
Sbjct: 250 LLGKGVIVTRAREQASGLVGVLREQGACVREFPTISVEPLDDYAEVETAILQLARYQWVV 309
Query: 172 FYARSSVLYFFSLPLPAKISAAF------LCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F + + V +F+ + A + A + + ++
Sbjct: 310 FTSVNGVRFFWRQLRAIGLDARIFGGMQIAAIGPATADELRTRGIEPDFIPDKYVAEHVV 369
Query: 226 KLLPLR 231
K L R
Sbjct: 370 KGLLER 375
>gi|161505550|ref|YP_001572662.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160866897|gb|ABX23520.1| hypothetical protein SARI_03715 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 246
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 73/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP +++ +G + PL F+ RE LA + S
Sbjct: 1 MSILVTRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLSTLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A + + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQQAGRYWPASPRYFAIGRTTALALHTVNGFDIRYPLDREISEVLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCVKHYDGAEEAMRWHARGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAYLARELGWQDIKVADNADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|283851602|ref|ZP_06368881.1| uroporphyrin-III C-methyltransferase [Desulfovibrio sp. FW1012B]
gi|283572932|gb|EFC20913.1| uroporphyrin-III C-methyltransferase [Desulfovibrio sp. FW1012B]
Length = 514
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 21/245 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+V+TR ++A + + G P ++ + Y + TS
Sbjct: 255 VVVTRSREQASDLVRLLAEEGACCYEFPAIEIAPLADTTPVRQAASRLYDYDWVIFTSVN 314
Query: 59 SLSTLP---------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ A I AIG A+A KG F + +
Sbjct: 315 GVKCFFAEVDALGLDARAFAGIRIAAIGPATAEALASKGLKADFLPERFVAESVVEGLLA 374
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + ++ + + L E + V+ Y ++ + + ++ +
Sbjct: 375 LGIAD--RRVLIPRAREARDVLPEKLAEAGADVSVLPVYDTRPVDQDPQEILEAIRAGEI 432
Query: 170 --ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V FF+ PA + + A + + +A +
Sbjct: 433 RYVTFTSSSTVKNFFAKIPPAALQAAGTVKTAVIGPITAKTLAEYGLSADVMAAAYTVPA 492
Query: 224 LLKLL 228
L + +
Sbjct: 493 LAEAI 497
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 4/84 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
++I R + EK+ + G ++P+ + + + TSS
Sbjct: 381 RVLIPRAREARDVLPEKLAEAGADVSVLPVYDTRPVDQDPQEILEAIRAGEIRYVTFTSS 440
Query: 58 ESLSTLPANFCRHTPIFAIGEASA 81
++ A A +A
Sbjct: 441 STVKNFFAKIPPAALQAAGTVKTA 464
>gi|86739202|ref|YP_479602.1| uroporphyrinogen-III synthase/uroporphyrinogen-III
C-methyltransferase [Frankia sp. CcI3]
gi|86566064|gb|ABD09873.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Frankia sp. CcI3]
Length = 607
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 19/246 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R ++A + ++ G P+ +P R + + Y +A TS
Sbjct: 333 VLVPRTKEQAAILSDLLRSHGASPLEVPTIAVEPPRTAAPMERAITGLVSGRYQWVAFTS 392
Query: 57 SESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHG--KDNSINLAKI 105
++ L A + AIGEA+A R G + +S L
Sbjct: 393 VNAVKAVQEKVEERSLDARAFAGVKVAAIGEATADALRTFGIRPDLVPSGQQSSEGLLAD 452
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ ++ L E + + Y + A P +++ L+
Sbjct: 453 WPDFDDTLDLLDRVLLPRADIATETLVAGLKERGWQVDDVTAYRTVRAAPPPASIREALK 512
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA++F + S+V + + + A+ V A +
Sbjct: 513 GGRVDAVVFTSSSTVRNLVGIAGKPHETTVIAVIGPATAATAQELGLRVDVQAPEASIPA 572
Query: 224 LLKLLP 229
L+ L
Sbjct: 573 LVGALA 578
>gi|323141797|ref|ZP_08076664.1| uroporphyrinogen-III C-methyltransferase [Phascolarctobacterium sp.
YIT 12067]
gi|322413720|gb|EFY04572.1| uroporphyrinogen-III C-methyltransferase [Phascolarctobacterium sp.
YIT 12067]
Length = 505
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 70/244 (28%), Gaps = 20/244 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+++TR +A +K++ G + P + + +A Y + TS+
Sbjct: 258 VIVTRARAQASALTKKLEAQGAKVIEAPAIKIVPAADYAPLDNAIANINDYKWLVFTSAN 317
Query: 59 SLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + AIG A+A + G T ++
Sbjct: 318 GVDYFFERLGAAKKDARALANVTLAAIGSATAKALAEHGLTADLIPSAYKA--EELAEAL 375
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
T ++ K + L + + V+ Y + + + L+ A
Sbjct: 376 AGEITAGDKILLARAKVAREVLPESLRKIGAIVDVVTAYETVADCENKDELIEALESGEA 435
Query: 168 DAILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ F + S+V + K AA + A + A L
Sbjct: 436 SIVTFTSSSTVTNLLEVLGDKKELLNKAALAAIGPVTADTLKKHGYTPAINAAEYTIDGL 495
Query: 225 LKLL 228
+ +
Sbjct: 496 MTAI 499
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 49/184 (26%), Gaps = 8/184 (4%)
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
++ + + T I +G+A+A + + L + +
Sbjct: 193 ADCPAAVIRWGTHPEQRTLITTLGKAAADVKATGMKPPAIFLVGEVVRLREQLQWFDNKP 252
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAIL 171
K +I + + L + A + + ++
Sbjct: 253 LFGKTVIVTRARAQASALTKKLEAQGAKVIEAPAIKIVPAADYAPLDNAIANINDYKWLV 312
Query: 172 FYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F + + V YFF AK A + + A A+ + K L
Sbjct: 313 FTSANGVDYFFERLGAAKKDARALANVTLAAIGSATAKALAEHGLTADLIPSAYKAEELA 372
Query: 226 KLLP 229
+ L
Sbjct: 373 EALA 376
>gi|294782422|ref|ZP_06747748.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium sp.
1_1_41FAA]
gi|294481063|gb|EFG28838.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium sp.
1_1_41FAA]
Length = 486
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 76/234 (32%), Gaps = 14/234 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A+ E I K G IPV +P + + + L Y AI S +
Sbjct: 253 RILVTRDKKQAVEMSENISKRGGIPVELPFIEIENLK--IDLNNLSKYKAILFNSPNGVK 310
Query: 62 TLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDN-SINLAKIIVEQKVLFTP 115
N + I A+G + + F ++ LA+ +V+
Sbjct: 311 AFFENIKDIRSLANIKIGAVGVKTKEALEKNKIVPDFVPEEYLVDRLAEDVVKYTEENDN 370
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + + Y +K + Y ++ + + L++ D I F +
Sbjct: 371 ---ILIVTSDISPCDTDKYNSLYKRNYEKVVAYNTKKLRVDREKVLETLKDIDIITFLSS 427
Query: 176 SSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F+ + + I V A +L
Sbjct: 428 STVEAFYESLDGDFFILGDKKIASIGPMTSETIRRLGMKVDYEAEKYTADGILD 481
>gi|302521074|ref|ZP_07273416.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. SPB78]
gi|318061889|ref|ZP_07980610.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. SA3_actG]
gi|318078098|ref|ZP_07985430.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. SA3_actF]
gi|302429969|gb|EFL01785.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. SPB78]
Length = 555
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 71/238 (29%), Gaps = 19/238 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +++ ++++ G +P +P R + Y IA T
Sbjct: 274 KVLVPRTKEQSRALSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 333
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 334 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTARALIAFGVKPDLTPSGEQSAAGLLE 393
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 394 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 453
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
+ DA+LF + S+V + C+ A V +A P
Sbjct: 454 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMAPEPS 511
>gi|312110035|ref|YP_003988351.1| uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y4.1MC1]
gi|311215136|gb|ADP73740.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y4.1MC1]
Length = 266
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 82/238 (34%), Gaps = 16/238 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
+++TR ++A EK+++ G IPV +PL + Y + TS+
Sbjct: 11 VLVTREKEQAKAFSEKLREAGAIPVEIPLIAISPSSHHEEIERCARQLSDYDWLVFTSAN 70
Query: 59 SLSTLPANFCRH---TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + +G+ +A + G + + +I K L P
Sbjct: 71 GVRFFFPFVKQKTLLPKVVVVGKKTAAALKAYGVSPAVVP--DEFVAEGVIEALKPLVKP 128
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFY 173
+ ++ + G D LI+ + + Y + + + LL+ D I F
Sbjct: 129 RDRVLLVKGNLARTVLRDALIDMGADVTDLIVYKTSMNEAGKERLLCLLREKKLDVITFT 188
Query: 174 ARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ S+V F + I+ A C+ + +V +++K
Sbjct: 189 SSSTVQSFLRMMERGDIASLLAGCAVACIGPITKKTAEKAGLSVHICPSEYTIDAMIK 246
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 26/77 (33%)
Query: 153 IAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV 212
L + D ++F + + V +FF + + + A+A+ A +
Sbjct: 47 HHEEIERCARQLSDYDWLVFTSANGVRFFFPFVKQKTLLPKVVVVGKKTAAALKAYGVSP 106
Query: 213 VTVACFPKETSLLKLLP 229
V +++ L
Sbjct: 107 AVVPDEFVAEGVIEALK 123
>gi|316931770|ref|YP_004106752.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
DX-1]
gi|315599484|gb|ADU42019.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
DX-1]
Length = 248
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/242 (20%), Positives = 88/242 (36%), Gaps = 14/242 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP T + ++ GY ++ P+ F Y + +TS+ +L
Sbjct: 1 MALLVTRPQPDGDATAKALRAKGYDVLLAPMLRFEPVPFP--DDPDARYTGVIVTSANAL 58
Query: 61 STLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ-KVLFTP 115
L P+FA+G+ +A A+ GF I ++ L I + +
Sbjct: 59 RALEDQPVLARLLGLPLFAVGKHTARKAQDAGFNDIIVADGDAARLRIKIGDSLRGTDKR 118
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFY 173
L+YL G + L E + + Y + + +L Y
Sbjct: 119 AGALLYLAGADLSRDLAGELREDGFEVVMQTAYRMAPVPTLPAEVCEAFAANRIEAVLHY 178
Query: 174 ARSSVLYFFSLPLPAKISAAFLCL-----SNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R S F + I + L + S ++ + + N V VA P E +LL+ L
Sbjct: 179 SRRSARAFIDATRTSGIEISALAIPQCCLSEAVSEVVREAGANQVMVARKPDEKALLEAL 238
Query: 229 PL 230
Sbjct: 239 DR 240
>gi|258645837|ref|ZP_05733306.1| uroporphyrinogen III synthase/methyltransferase [Dialister invisus
DSM 15470]
gi|260403209|gb|EEW96756.1| uroporphyrinogen III synthase/methyltransferase [Dialister invisus
DSM 15470]
Length = 513
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 66/246 (26%), Gaps = 17/246 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-----SVFLAMQQSYGAIAITS 56
++VITR +A R E ++ +G +P + + Y I TS
Sbjct: 263 HVVITRSRTQASRLTEVLEDLGAFCTEIPSIKIESPDDGWASIDQGIEKLAEYNWIVFTS 322
Query: 57 SESLSTLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ +Q + S A+ + E
Sbjct: 323 QNGVDAFFKRIYEKGFDTRALGHVKIAVIGPATDKQLLLYGLKADCVPSAYKAEDLAEAM 382
Query: 111 VLFTPQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-- 167
+ ++ K + L + + V + Y + + +K LL N
Sbjct: 383 KPLVRRGDKILLPRAKVARSVLPEMLTGYGCHVDVAEAYETVCDEENKEKLKELLVNHEV 442
Query: 168 DAILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D I F + S+V + C+ A A ++ L
Sbjct: 443 DIITFTSSSTVFNLVDQLDGKTGLLDGVSLACIGPITADACRKYGLEPQIISDTFTIDGL 502
Query: 225 LKLLPL 230
+ +
Sbjct: 503 TEAIVK 508
>gi|310780154|ref|YP_003968486.1| uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III
synthase [Ilyobacter polytropus DSM 2926]
gi|309749477|gb|ADO84138.1| uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III
synthase [Ilyobacter polytropus DSM 2926]
Length = 490
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/236 (13%), Positives = 77/236 (32%), Gaps = 10/236 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A I+K G V +PL + + + Y + S ++
Sbjct: 254 KILVTRDEKQAEAMSSVIEKKGGEAVELPLIQIEDQMKDYDYSEIKKYSCLLFNSQNAVR 313
Query: 62 TLPANFCRHT-----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ I +G + + F ++ L + E +
Sbjct: 314 SFFRYLPDMRLLGDIKIGVVGVKTKEELLKVKLVPDFMPEEYIGEL--LAKEACDCTKEE 371
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
++++ + E++ ++K + Y + I ++ ++ L+ D + F + S
Sbjct: 372 DKILFVTSDISPNNPEEWSAKYKRNFEKLAAYKTVKIKKDKSEVEETLKGVDIVTFLSSS 431
Query: 177 SVLYFFSLPLPAK---ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+V F F + + + +V A +LK +
Sbjct: 432 TVEAFVESLDGNLDGIKGVKFASIGPVTSETMKKLGLSVDIEAKIFTAEGVLKSIE 487
>gi|219666766|ref|YP_002457201.1| uroporphyrin-III C-methyltransferase [Desulfitobacterium hafniense
DCB-2]
gi|219537026|gb|ACL18765.1| uroporphyrin-III C-methyltransferase [Desulfitobacterium hafniense
DCB-2]
Length = 504
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 73/245 (29%), Gaps = 20/245 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
IV+TR +A + I+ +G P P + L + + + TS+
Sbjct: 256 RIVVTRARHQAGVLAQAIEDLGGEPWEFPAIEIREPSDPELLTRAMQDLRRFKWLVFTSA 315
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + I A+G + Q+G ++ I+ E
Sbjct: 316 NGVERFLSGLKDSGKDIRDLSGMEIVAVGPVTQAALEQRGLCVTCMPEEYRA--EGILAE 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
P + ++ + L + + Y + + + +K++L++
Sbjct: 374 LTGRILPGEGVLLARAEEARDVLPQSLQTLGAEVWDVPVYKTVSGSANKGLLKSMLEDKQ 433
Query: 169 A--ILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V F L + ++A + A
Sbjct: 434 IQAVTFTSSSTVRNFCRLIDNQTELLDGVKLFSIGPLTSAAARELGLPIHKEAARSTIDG 493
Query: 224 LLKLL 228
L+ L
Sbjct: 494 LVAAL 498
>gi|237742176|ref|ZP_04572657.1| uroporphyrin-III C-methyltransferase [Fusobacterium sp. 4_1_13]
gi|256845449|ref|ZP_05550907.1| uroporphyrin-III C-methyltransferase [Fusobacterium sp. 3_1_36A2]
gi|229429824|gb|EEO40036.1| uroporphyrin-III C-methyltransferase [Fusobacterium sp. 4_1_13]
gi|256719008|gb|EEU32563.1| uroporphyrin-III C-methyltransferase [Fusobacterium sp. 3_1_36A2]
Length = 485
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 80/236 (33%), Gaps = 14/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A+ + I K G IP+ +P + + + L + Y AI S +
Sbjct: 253 KILVTRDKKQAVEMSKNISKRGGIPIELPFIEIKNLK--IDLKDLEKYKAILFNSPNGVK 310
Query: 62 TLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDN-SINLAKIIVEQKVLFTP 115
N + I A+G + + + F + LA+ +V+
Sbjct: 311 AFFENIKDIRCLANIKIGAVGVKTKEILEKYKIVPDFVPNEYLVDKLAEEMVKYTNENDN 370
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + + Y +K + + Y ++ + + L++ D I F +
Sbjct: 371 ---ILIVTSDISPCDTDKYNSLYKRNYQKVVAYNTKKLKVDREKVLETLKDVDIITFLSS 427
Query: 176 SSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F+ + + I V A LL ++
Sbjct: 428 STVEAFYENLDGNFFILGDKKIASIGPMTSETIRRLGMKVDYEAEKYTADGLLDVI 483
>gi|19421891|gb|AAL87779.1|AF403184_4 putative uroporphyrinogen III synthase/methyltransferase
[Desulfitobacterium hafniense DCB-2]
Length = 452
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 73/245 (29%), Gaps = 20/245 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
IV+TR +A + I+ +G P P + L + + + TS+
Sbjct: 204 RIVVTRARHQAGVLAQAIEDLGGEPWEFPAIEIREPSDPELLTRAMQDLRRFKWLVFTSA 263
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + I A+G + Q+G ++ I+ E
Sbjct: 264 NGVERFLSGLKDSGKDIRDLSGMEIVAVGPVTQAALEQRGLCVTCMPEEYRA--EGILAE 321
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
P + ++ + L + + Y + + + +K++L++
Sbjct: 322 LTGRILPGEGVLLARAEEARDVLPQSLQTLGAEVWDVPVYKTVSGSANKGLLKSMLEDKQ 381
Query: 169 A--ILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V F L + ++A + A
Sbjct: 382 IQAVTFTSSSTVRNFCRLIDNQTELLDGVKLFSIGPLTSAAARELGLPIHKEAARSTIDG 441
Query: 224 LLKLL 228
L+ L
Sbjct: 442 LVAAL 446
>gi|333025239|ref|ZP_08453303.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Streptomyces sp. Tu6071]
gi|332745091|gb|EGJ75532.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Streptomyces sp. Tu6071]
Length = 518
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 71/238 (29%), Gaps = 19/238 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +++ ++++ G +P +P R + Y IA T
Sbjct: 237 KVLVPRTKEQSRALSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 296
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 297 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTARALIAFGVKPDLTPSGEQSAAGLLE 356
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 357 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAI 416
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
+ DA+LF + S+V + C+ A V +A P
Sbjct: 417 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVMAPEPS 474
>gi|221633109|ref|YP_002522334.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159]
gi|221155998|gb|ACM05125.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159]
Length = 560
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 66/246 (26%), Gaps = 19/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++ RP + E+++ +G V+ PL + + LA + + TS+
Sbjct: 311 RVLLVRPAGQETFLVERLRALGAEAVIHPLIRILPPEDWGPLDAALADLARFDWVVFTSA 370
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ R + AIG A+A R+ +
Sbjct: 371 NGVRATLERLRLLGGGSELLREKRLAAIGPATARALREYELEPDIVPDKFIAEAVA--AQ 428
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
++ L E + V+ Y ++ + E L
Sbjct: 429 LIARGVAGARVLVARAAEAREILPRRLEEAGATVVVVPAYRTELLPLDEAIQAALEAGTI 488
Query: 169 AILF-YARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+F A S+ + K + A V VA L
Sbjct: 489 DWIFLTASSTARALAAALGDIKRLSDRIRIAAIGPVTAGTARELGLRVDVVADTYTAEGL 548
Query: 225 LKLLPL 230
++ +
Sbjct: 549 IEAVVR 554
Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 11/123 (8%), Positives = 26/123 (21%), Gaps = 8/123 (6%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLLQNADAILFYA 174
+ ++ + + + L + P L D ++F +
Sbjct: 310 RRVLLVRPAGQETFLVERLRALGAEAVIHPLIRILPPEDWGPLDAALADLARFDWVVFTS 369
Query: 175 RSSVLYFFSLPL------PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ V + A A+ V ++ L
Sbjct: 370 ANGVRATLERLRLLGGGSELLREKRLAAIGPATARALREYELEPDIVPDKFIAEAVAAQL 429
Query: 229 PLR 231
R
Sbjct: 430 IAR 432
>gi|91201153|emb|CAJ74212.1| strongly similar to uroporphyrinogen III synthase/methyltransferase
[Candidatus Kuenenia stuttgartiensis]
Length = 508
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 69/246 (28%), Gaps = 21/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSE 58
IV+TR ++A +++ + G + P + + +Y + TS
Sbjct: 255 IVVTRSREQASEFADRLYEFGANVIEFPTIEIVKPDSIQPLDEAINTINTYDWLVFTSIN 314
Query: 59 SLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + + I AIG A+A + +
Sbjct: 315 GVDSFFQRLFELGKDVRVLKGLKICAIGPATAGGIERYHIRVDCKPPKFVAESVAE-ELK 373
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--A 167
KV + + + + L + + + Y + + + ++N
Sbjct: 374 KVTAIKGERFLLPRADIARSYLPEELQKSGGEVNDLIVYKTLMGQPKDVNILEKMRNGEI 433
Query: 168 DAILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ I F + S+V F L I F + ++ A
Sbjct: 434 NIITFTSSSTVRNFVQLIGKENITSLKGHIQFASIGPITTKTAEEMGIDIAIKAKEYTIP 493
Query: 223 SLLKLL 228
L+ +
Sbjct: 494 GLVNAI 499
Score = 38.6 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 38/160 (23%), Gaps = 8/160 (5%)
Query: 79 ASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEH 138
+ + + L + + K ++ + + F D L E
Sbjct: 215 NTIVAKAKNIKPPAITIVGEVVKLRDQLNWFENRPLFGKTIVVTRSREQASEFADRLYEF 274
Query: 139 KIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL- 195
+ + N + D ++F + + V FF L
Sbjct: 275 GANVIEFPTIEIVKPDSIQPLDEAINTINTYDWLVFTSINGVDSFFQRLFELGKDVRVLK 334
Query: 196 -----CLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ A I + V S+ + L
Sbjct: 335 GLKICAIGPATAGGIERYHIRVDCKPPKFVAESVAEELKK 374
>gi|90416176|ref|ZP_01224108.1| uroporphyrinogen-III synthetase [marine gamma proteobacterium
HTCC2207]
gi|90331901|gb|EAS47115.1| uroporphyrinogen-III synthetase [marine gamma proteobacterium
HTCC2207]
Length = 243
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 25/238 (10%), Positives = 69/238 (28%), Gaps = 9/238 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++ RP+++A + E +++ G +P+ + + ++ S
Sbjct: 4 RILVIRPLRQADQFIELLERAGNQVCHIPVMAIEPVVDGQSIKNLILEVDNFDKAICVSG 63
Query: 58 ESLSTLPANFCRHTPIFAIGEASAC-----LARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ R+ P+ +G + N ++ ++
Sbjct: 64 NAAELAIEWLDRYWPMQPVGIEYFAIGQQTAHILGAADIVALSPSGRQNSEALLALPELQ 123
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ +I G+ D LIE + + Y + + +D ++
Sbjct: 124 DLSDQRVIVFRGRGGREILGDTLIERGARVDYCELYERVINPQKALLARKQMLESDCLVA 183
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
++ + + A + S +A + A ++L +
Sbjct: 184 HSGELLTALGDQSGESGAETAVVVPSERVAEIAWKLGYRNIVSAENALPEAMLAAVQK 241
>gi|22299698|ref|NP_682945.1| porphyrin biosynthesis protein [Thermosynechococcus elongatus BP-1]
gi|22295882|dbj|BAC09707.1| porphyrin biosynthesis protein [Thermosynechococcus elongatus BP-1]
Length = 501
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 76/247 (30%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSE 58
I++TR +A +++ G + MP + LA ++ + +TS
Sbjct: 255 ILVTRAAAQASDFTQQLTAAGATVLEMPTLEIVPPSSWQPLDQALAQLDTFDWLILTSHN 314
Query: 59 SLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+++ H I +GE +A + G F ++ + ++VE
Sbjct: 315 AVTFFMKRLHSHGKDSRALAGLKIAVVGEKTAQTLNRYGLVADFTPREFVAD--ALVVEF 372
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
+ L K + + + Y S+ + + LQ
Sbjct: 373 PEPVAGLRFLFPRVEKGGRPVLGEAFTAAGAEVVEVPAYNSRCPQTVDAPVLAALQAGQV 432
Query: 168 DAILFYARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D + F + +V +F L P + + + V T A
Sbjct: 433 DIVTFTSSKTVKHFCQLVGPQAAELLQNVQIASIGPQTSQTCRELLGRVDTEATEHTLEG 492
Query: 224 LLKLLPL 230
LL+ L
Sbjct: 493 LLQALLR 499
>gi|91791754|ref|YP_561405.1| uroporphyrinogen III synthase HEM4 [Shewanella denitrificans OS217]
gi|91713756|gb|ABE53682.1| Uroporphyrinogen III synthase HEM4 [Shewanella denitrificans OS217]
Length = 238
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 71/239 (29%), Gaps = 10/239 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP + + + + ++G + PL + + S+ ++
Sbjct: 1 MKVLLTRPEGRNQQMADALTQLGIGYHLCPLLEITPSNTPPKASFFS-ADKLVFISANAV 59
Query: 61 STLPANFCRHTPIFAIGEASACLARQ---KGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
N H P+ A + + + + ++ ++ +
Sbjct: 60 YFAANNLNNHFPMHCEYFAVGEATQMALAEYQVVSQSAPSSQQDSEGLLSLSQLQDVELQ 119
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYAR 175
+ + G+ L E + Y A ++ Q+ ++ +
Sbjct: 120 KITIVRGEGGRETLAQTLSERGANVDYWQVYQRSKPALDPKSVCQQWQDLGIDTLVLTSG 179
Query: 176 SSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
++ L S + S+ + + + V+ A ++L L L
Sbjct: 180 EALANLMELVPKELFAWLRSCHMIVPSHRVQVQAISQGFHRVSNANGASTQAILTALAL 238
>gi|262067558|ref|ZP_06027170.1| porphyrin biosynthesis protein HemD [Fusobacterium periodonticum
ATCC 33693]
gi|291378733|gb|EFE86251.1| porphyrin biosynthesis protein HemD [Fusobacterium periodonticum
ATCC 33693]
Length = 486
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 80/236 (33%), Gaps = 14/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A+ + I K G IPV +P + + + L + Y AI S +
Sbjct: 253 KILVTRDKKQAVEMSKNISKRGGIPVELPFIEIENLK--IDLKDLEKYKAILFNSPNGVK 310
Query: 62 TLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDN-SINLAKIIVEQKVLFTP 115
N + I A+G + + + F + LA+ +V+
Sbjct: 311 AFFENIKDVRCLANIKIGAVGVKTKEILEKYKIVPDFVPDEYLVDRLAEDVVKYTNENDN 370
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + + Y +K + Y ++ + + L++ D I F +
Sbjct: 371 ---ILIVTSDISPCDTDKYNSVYKRNYEKVVAYNTKKLKVDREKVLETLKDIDIITFLSS 427
Query: 176 SSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F+ + + + I V A +L ++
Sbjct: 428 STVEAFYESLDGDFFILGNKKIASIGPMTSETIRRLGMKVDYEAEKYTADGVLDVI 483
>gi|289207198|ref|YP_003459264.1| uroporphyrinogen III synthase HEM4 [Thioalkalivibrio sp. K90mix]
gi|288942829|gb|ADC70528.1| Uroporphyrinogen III synthase HEM4 [Thioalkalivibrio sp. K90mix]
Length = 271
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 22/244 (9%), Positives = 58/244 (23%), Gaps = 16/244 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSSE 58
I++TRP +A + G + P+ + + L ++ S
Sbjct: 20 ILVTRPAAQAEEFCTLLAGDGAEVIRFPVLEILAPSDPTDLRAVLNQLDNFDIAVFISPN 79
Query: 59 SLS-----TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
++ L A + + + ++ + +
Sbjct: 80 AVQRVLNLALADRTWPEGTRIAAIGNRTAKELKGFGLNVDIAPPRRFDSEALLEQPAMQD 139
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AIL 171
+ ++ G + D L + + Y + I
Sbjct: 140 VAGQRVVIFRGDGGREYLGDTLKSRGAEVTFAEAYRRGRPEGDTGALMYAFSRDQIDIIT 199
Query: 172 FYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKN-VVTVACFPKETSLLK 226
+ + + + + S I V VA P + ++ +
Sbjct: 200 ITSGEGLRNLYEMVGKLGRMWLRKTPLVVGSERIGEIAHELGFKAAVEVAEDPTDAAMQQ 259
Query: 227 LLPL 230
+
Sbjct: 260 AVHR 263
>gi|292486674|ref|YP_003529544.1| uroporphyrinogen III synthase [Erwinia amylovora CFBP1430]
gi|292897911|ref|YP_003537280.1| uroporphyrinogen III synthase [Erwinia amylovora ATCC 49946]
gi|291197759|emb|CBJ44854.1| uroporphyrinogen III synthase [Erwinia amylovora ATCC 49946]
gi|291552091|emb|CBA19128.1| uroporphyrinogen III synthase [Erwinia amylovora CFBP1430]
Length = 245
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 17/245 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP+ A + ++++ G + PL F ++ L ++ + I S
Sbjct: 1 MSILVTRPLPAADQLVSRLRQRGSVAWAFPLIEFAPGKQLDILPERLKALKARDLVFILS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK------IIVEQK 110
+ F ++ + R G + + +I
Sbjct: 61 QHVIHFARPTFTAEDSPWSASLDYYAIGRSTGLAFHAASGHDVSWPHERETSEILIQLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L+ + I+CY + Y E + Q D
Sbjct: 121 LQAVAGKRALILRGNGGRELLAETLLSRGAQVEFIECYQRRAKYYHGAEEGRRWRNQGID 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + + +S +A+ V VA +
Sbjct: 181 TLVVTSGEMLQQLYSLFPDVDRDEWLLHCRLVVVSERLATLARKLGWANVDVADGADNDA 240
Query: 224 LLKLL 228
LL+ L
Sbjct: 241 LLRAL 245
>gi|325108641|ref|YP_004269709.1| uroporphyrinogen-III C-methyltransferase; uroporphyrinogen-III
synthase [Planctomyces brasiliensis DSM 5305]
gi|324968909|gb|ADY59687.1| uroporphyrinogen-III C-methyltransferase; uroporphyrinogen-III
synthase [Planctomyces brasiliensis DSM 5305]
Length = 509
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 76/246 (30%), Gaps = 22/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSSE 58
I ITRP +A E+I ++G PV+MP+ + + L+ + I TS+
Sbjct: 260 IGITRPAAQAEPQIERIVELGGQPVVMPVIDIVPPTDWAETDQILSRLDEFEWIVFTSAN 319
Query: 59 SLSTLPANFCR--------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + H + IG A+A +D + +
Sbjct: 320 GVHSFLGRLWEYGLDTRAIHCKLACIGSATAEALHSYHLRADLVPEDFCS---EGLAAAL 376
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ PQ P+++ L I L + Y+ D + LL +
Sbjct: 377 IQRKPQGPVLWARANRGRDVLPKRLAAAGISLETVVVYHHVDQTEFDERASYLLDRGEVH 436
Query: 171 L--FYARSSVLYFFSLPLPAKISA-----AFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + ++ + +S A+A + V A
Sbjct: 437 WIGLSSPAIATQLANMLTEDQKQTLGTTMKLAAISPITAAAAKEAGLPVHATAKEFTWDG 496
Query: 224 LLKLLP 229
+L+ +
Sbjct: 497 ILQAIQ 502
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/142 (11%), Positives = 40/142 (28%), Gaps = 7/142 (4%)
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ ++L K + + + + + ++E V+
Sbjct: 239 DCVSLRKRLAWFEDRPLFGLSIGITRPAAQAEPQIERIVELGGQPVVMPVIDIVPPTDWA 298
Query: 158 T--TMKNLLQNADAILFYARSSVLYFFSLPLPAKISA-----AFLCLSNNIASAIPASYK 210
+ + L + I+F + + V F + C+ + A A+ + +
Sbjct: 299 ETDQILSRLDEFEWIVFTSANGVHSFLGRLWEYGLDTRAIHCKLACIGSATAEALHSYHL 358
Query: 211 NVVTVACFPKETSLLKLLPLRR 232
V L L R+
Sbjct: 359 RADLVPEDFCSEGLAAALIQRK 380
>gi|325576793|ref|ZP_08147408.1| uroporphyrinogen-III synthase [Haemophilus parainfluenzae ATCC
33392]
gi|325160999|gb|EGC73117.1| uroporphyrinogen-III synthase [Haemophilus parainfluenzae ATCC
33392]
Length = 253
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 72/244 (29%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M +++TRP ++ +++ + G + + +PL E L +S + + S
Sbjct: 1 MAVLVTRPDERGKALVDQLNQAGVVALHLPLLSIEAGAELAQLPTKLNQLKSGDYVFLVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + S N ++ +
Sbjct: 61 QSAVDFADKTLKDIGFNWRQDLQYFTVGHRTAQHFSCQTECTVRYPITSENTEGVLNLPQ 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K L+ L G + + I+CY I+Y ++ +
Sbjct: 121 MTELTDKNLLILRGNGGRELLREQAELRGATVDTIECYQRTPISYNNEEQTSICIRSGVQ 180
Query: 170 -ILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++ + + + + + +S IA + V V+ SL
Sbjct: 181 TLVVTSLEILQALIEFVPENEQNWLKNCCLVTVSQRIADVAIQQGWHNVVVSAGADNQSL 240
Query: 225 LKLL 228
L L
Sbjct: 241 LNTL 244
>gi|237740510|ref|ZP_04570991.1| uroporphyrinogen-III synthase [Fusobacterium sp. 2_1_31]
gi|229422527|gb|EEO37574.1| uroporphyrinogen-III synthase [Fusobacterium sp. 2_1_31]
Length = 486
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 76/234 (32%), Gaps = 14/234 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A+ E I K G IPV +P + + + L Y AI S +
Sbjct: 253 RILVTRDKKQAVEMSENISKRGGIPVELPFIEIENLK--IDLDNLSKYKAILFNSPNGVK 310
Query: 62 TLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDN-SINLAKIIVEQKVLFTP 115
N + I A+G + + F ++ LA+ +V+
Sbjct: 311 AFFENIKDIRSLANIQIGAVGVKTKEALEKNKIVPDFVPEEYLVDKLAEDVVKYTEENDN 370
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + + Y +K + Y ++ + + L++ D I F +
Sbjct: 371 ---ILIVTSDISPCDTDKYNSLYKRNYEKVVAYNTKKLRVDREKVLETLKDIDIITFLSS 427
Query: 176 SSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F+ + + I V A +L
Sbjct: 428 STVEAFYESLDGDFFILGDKKIASIGPMTSETIRRLGMKVDYEAEKYTADGILD 481
>gi|312170740|emb|CBX79002.1| uroporphyrinogen III synthase [Erwinia amylovora ATCC BAA-2158]
Length = 245
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 17/245 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP+ A + ++++ G + PL F ++ L ++ + I S
Sbjct: 1 MSILVTRPLPAADQLVSRLRQRGSVAWAFPLIEFAPGKQLDILPERLKALKARDLVFILS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK------IIVEQK 110
+ F ++ + R G + + +I
Sbjct: 61 QHVIHFTRPTFTAEDSPWSASLDYYAIGRSTGLAFHAASGHDVSWPHERETSEILIQLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L+ + I+CY + Y E + Q D
Sbjct: 121 LQAVAGKRALILRGNGGRELLAETLLSRGAQVEFIECYQRRAKYYHGAEEGRRWRNQGID 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + + +S +A+ V VA +
Sbjct: 181 TLVVTSGEMLQQLYSLFPDVDRDEWLLHCRLVVVSERLATLARKLGWANVDVADGADNDA 240
Query: 224 LLKLL 228
LL+ L
Sbjct: 241 LLRAL 245
>gi|182415287|ref|YP_001820353.1| uroporphyrinogen III synthase HEM4 [Opitutus terrae PB90-1]
gi|177842501|gb|ACB76753.1| Uroporphyrinogen III synthase HEM4 [Opitutus terrae PB90-1]
Length = 270
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 23/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSY----FIHDRESVFLAMQQSYGAIAITSS 57
I++TR ++A K+ +G + +PL + + L SY I TS+
Sbjct: 14 RIIVTRAREQASELSAKLTALGAEVLELPLIRVSKHISKEALADVLLELGSYDWIVFTSA 73
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIV 107
+ F R +G+A+A R+ K LA ++
Sbjct: 74 NGVRYFFEEFLRIFDDIRSLGLLRFACVGDATAKGIRELHLKVECQPKVATGEALADALI 133
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
E L ++ + G L + + Y ++ + + +
Sbjct: 134 ETGSLD--NAKVVVITGNLNRDVLVTKLEGAHAIVDQLQVYQTERVDLTDNPAAAEFRTQ 191
Query: 168 --DAILFYARSSVLYFFSL-----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
DA+LF + S+V F + F + + ++ + + VA P
Sbjct: 192 GADAVLFASSSAVDSFAAQQAALTLQKGAKPPLFGSIGPLTSESLTKAGLEIGFVAKEPN 251
Query: 221 ETSLLKLLPLR 231
SL++ L +
Sbjct: 252 LDSLVQALVKK 262
>gi|62182408|ref|YP_218825.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62130041|gb|AAX67744.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322716901|gb|EFZ08472.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 246
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ A R + + LA + ++ +
Sbjct: 61 QHAVAFAHAQLQRDGRNWPASPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + L +S +A + VA +
Sbjct: 181 TLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNVDNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|163757400|ref|ZP_02164489.1| uroporphyrinogen-III synthetase [Hoeflea phototrophica DFL-43]
gi|162284902|gb|EDQ35184.1| uroporphyrinogen-III synthetase [Hoeflea phototrophica DFL-43]
Length = 243
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 71/240 (29%), Positives = 110/240 (45%), Gaps = 11/240 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A RT +++ +G+ PV++PL L Q G + TS+ +
Sbjct: 1 MRVLVTRPEPGASRTASRLRTLGHEPVILPLFEAQITARPDDLPPVQQVGGLIATSARAF 60
Query: 61 STLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
S +N H P++ +G A+A AR GF + G ++ +LA + Q
Sbjct: 61 SIFGSNTAPAEYLHFPVYTVGPATAQAARDAGFHDVHEGAGSARDLAGALTAQSGTAVDG 120
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI--AYPETTMKNLLQNADAILFYA 174
L+YL G PR E+ L +PL+V++ Y + + L DA LFY+
Sbjct: 121 PGLLYLAGSPRKPFLEEALTAEGLPLKVLETYRMDQLSYPTDSQILDLLSPAPDAALFYS 180
Query: 175 RSSVLYFFSL-----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
++ L F SL + S F+CLS I+SA P ++ V A P E SLL L
Sbjct: 181 SNAALGFCSLVSTKNLDKSLQSTFFMCLSPEISSAFPETWMARVISAGHPDEDSLLASLA 240
>gi|22124295|ref|NP_667718.1| uroporphyrinogen-III synthase [Yersinia pestis KIM 10]
gi|45442948|ref|NP_994487.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Microtus str.
91001]
gi|108806169|ref|YP_650085.1| uroporphyrinogen-III synthase [Yersinia pestis Antiqua]
gi|108810279|ref|YP_646046.1| uroporphyrinogen-III synthase [Yersinia pestis Nepal516]
gi|145600718|ref|YP_001164794.1| uroporphyrinogen-III synthase [Yersinia pestis Pestoides F]
gi|153948434|ref|YP_001399194.1| uroporphyrinogen-III synthase [Yersinia pseudotuberculosis IP
31758]
gi|153997094|ref|ZP_02022227.1| uroporphyrinogen-III synthase [Yersinia pestis CA88-4125]
gi|162421487|ref|YP_001605128.1| uroporphyrinogen-III synthase [Yersinia pestis Angola]
gi|165926265|ref|ZP_02222097.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939119|ref|ZP_02227670.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011703|ref|ZP_02232601.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213549|ref|ZP_02239584.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401850|ref|ZP_02307338.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420963|ref|ZP_02312716.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426251|ref|ZP_02318004.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470636|ref|ZP_02335340.1| uroporphyrinogen-III synthase [Yersinia pestis FV-1]
gi|170026228|ref|YP_001722733.1| uroporphyrinogen-III synthase [Yersinia pseudotuberculosis YPIII]
gi|218930853|ref|YP_002348728.1| uroporphyrinogen-III synthase [Yersinia pestis CO92]
gi|229837183|ref|ZP_04457348.1| uroporphyrinogen III synthase [Yersinia pestis Pestoides A]
gi|229839543|ref|ZP_04459702.1| uroporphyrinogen III synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229900106|ref|ZP_04515243.1| uroporphyrinogen III synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229900448|ref|ZP_04515577.1| uroporphyrinogen III synthase [Yersinia pestis Nepal516]
gi|270488803|ref|ZP_06205877.1| uroporphyrinogen-III synthase [Yersinia pestis KIM D27]
gi|294505513|ref|YP_003569575.1| uroporphyrinogen-III synthetase [Yersinia pestis Z176003]
gi|21957066|gb|AAM83969.1|AE013638_7 uroporphyrinogen III synthase [Yersinia pestis KIM 10]
gi|45437815|gb|AAS63364.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Microtus str.
91001]
gi|108773927|gb|ABG16446.1| uroporphyrinogen-III synthase [Yersinia pestis Nepal516]
gi|108778082|gb|ABG12140.1| uroporphyrinogen-III synthase [Yersinia pestis Antiqua]
gi|115349464|emb|CAL22437.1| uroporphyrinogen-III synthase [Yersinia pestis CO92]
gi|145212414|gb|ABP41821.1| uroporphyrinogen-III synthase [Yersinia pestis Pestoides F]
gi|149289400|gb|EDM39478.1| uroporphyrinogen-III synthase [Yersinia pestis CA88-4125]
gi|152959929|gb|ABS47390.1| uroporphyrinogen-III synthase [Yersinia pseudotuberculosis IP
31758]
gi|162354302|gb|ABX88250.1| uroporphyrinogen-III synthase [Yersinia pestis Angola]
gi|165912892|gb|EDR31518.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921789|gb|EDR38986.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989472|gb|EDR41773.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205222|gb|EDR49702.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961092|gb|EDR57113.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048743|gb|EDR60151.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054770|gb|EDR64574.1| uroporphyrinogen-III synthase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169752762|gb|ACA70280.1| Uroporphyrinogen-III synthase [Yersinia pseudotuberculosis YPIII]
gi|229682467|gb|EEO78554.1| uroporphyrinogen III synthase [Yersinia pestis Nepal516]
gi|229686886|gb|EEO78965.1| uroporphyrinogen III synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695909|gb|EEO85956.1| uroporphyrinogen III synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706126|gb|EEO92135.1| uroporphyrinogen III synthase [Yersinia pestis Pestoides A]
gi|262363579|gb|ACY60300.1| uroporphyrinogen-III synthetase [Yersinia pestis D106004]
gi|262367507|gb|ACY64064.1| uroporphyrinogen-III synthetase [Yersinia pestis D182038]
gi|270337307|gb|EFA48084.1| uroporphyrinogen-III synthase [Yersinia pestis KIM D27]
gi|294355972|gb|ADE66313.1| uroporphyrinogen-III synthetase [Yersinia pestis Z176003]
gi|320013549|gb|ADV97120.1| uroporphyrinogen III synthase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 249
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITS 56
M I++TRP + +++ +G + PL F R+ L Q+ + S
Sbjct: 1 MTILVTRPSPAGEQLVTRLRALGRVAYHAPLIDFSPGRDLPKLPELLQDMQAGDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R+ + + + LA ++
Sbjct: 61 QNAVRYANPLLKRNKLSWPVQLSYYAIGRTTALALHTASRLHVTFPPMGETSEMLLSLPL 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
+ K + L G L E + +CY I Y + Q D
Sbjct: 121 LQNLAGKKALLLRGNGGRELLGASLAERGAAVTFCECYQRSPIYYDGSEQSAHWQRAGVD 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S+ +A+ V VA +
Sbjct: 181 ILVVTSGEMLQQIYTLVPDYYRSSWLLRCRLIVVSDRLAALATQMGWTEVRVAENADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LIRALQ 246
>gi|301155140|emb|CBW14604.1| uroporphyrinogen III synthase [Haemophilus parainfluenzae T3T1]
Length = 254
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 73/246 (29%), Gaps = 16/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M +++TRP ++ +++ + G + + +PL E L +S + + S
Sbjct: 1 MAVLVTRPDERGKALVDQLNQAGVVALHLPLLSIEAGAELAQLPTKLNQLKSGDYVFLVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + S N ++ +
Sbjct: 61 KSAVDFADKTLKDIGFSWRQDLQYFTVGHRTAQHFSCQTECTVRYPITSENTEGVLNLPQ 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K L+ L G + + ++CY I+Y ++ +
Sbjct: 121 MAELTDKNLLILRGNGGRELLREQTTLRGATVETVECYQRTPISYNNEEQTSICIRSGVQ 180
Query: 170 -ILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++ + + + + + +S IA + V V+ SL
Sbjct: 181 TLVVTSLEILQALIEFVPENEQNWLKNCCLVTVSQRIADVAIQQGWHNVVVSAGADNQSL 240
Query: 225 LKLLPL 230
L L L
Sbjct: 241 LNTLLL 246
>gi|304407493|ref|ZP_07389145.1| uroporphyrin-III C-methyltransferase [Paenibacillus curdlanolyticus
YK9]
gi|304343444|gb|EFM09286.1| uroporphyrin-III C-methyltransferase [Paenibacillus curdlanolyticus
YK9]
Length = 517
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 73/257 (28%), Gaps = 28/257 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES-------VFLAMQQSYGAIAI 54
I++TR +A I+++G P P+ ++ L ++ +
Sbjct: 255 RILVTRARTQASDLVRLIEELGGEPCEYPVIETREPSDANTVQAIEQALREADTFDWLMF 314
Query: 55 TSSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
TS + R+ I A+G +A +++G +
Sbjct: 315 TSVNGVEAFYRWLKRYGVDIRKFAKARIAAVGPKTAEALQERGLAVEELPAQFRQ--EGL 372
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + + G L + +D Y + + + LLQ
Sbjct: 373 VEKLDASLKAGQRALIARGDLAREVLPRELNARGVETVELDVYETVLAEHQDEMALELLQ 432
Query: 166 N--ADAILFYARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPASYKNVVTV 215
+ F + S+V L + + + + + +V
Sbjct: 433 EGAVHVVTFTSSSTVTNLIELLRRNGVEEPEKLLAKSQIASIGPLTTATAAEAGLHVTIE 492
Query: 216 ACFPKETSLLKLLPLRR 232
+L+ + +R
Sbjct: 493 PEEATIEALVAAIAAQR 509
>gi|297171614|gb|ADI22610.1| uroporphyrinogen-III methylase [uncultured verrucomicrobium
HF0500_16O23]
Length = 509
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 76/248 (30%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+V+TR ++A ++ ++G + MP + + L SY + TS
Sbjct: 257 RVVVTRTRQQASVLTGQLTELGAEVLEMPTIRIEEPDDKITLKDGLLGLGSYQWLIFTSP 316
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNS-INLAKIIV 107
+ F + I AIG A+A + +D + + K
Sbjct: 317 NGVERFFDYFFKAFDDIRDIGGCRIAAIGPATAAKLKDLHLNIDLMPEDYTAAGVVKSFQ 376
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN- 166
E K + + + N L + + I Y + T ++++
Sbjct: 377 ESKDYTIENENVALFRAQVANSELPKALEKLGAIIDDIPVYKTVPETEDVTGAVSMMEEG 436
Query: 167 -ADAILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
AD I F + S+V F + + + + + + A
Sbjct: 437 GADWITFTSSSTVENFNARFGIVKSLEQHGMKPISIGPETSKTLRNLGVEPAIEASTHTI 496
Query: 222 TSLLKLLP 229
++ L
Sbjct: 497 AGMVTALK 504
>gi|15669184|ref|NP_247989.1| uroporphyrinogen III synthase HemD [Methanocaldococcus jannaschii
DSM 2661]
gi|3122192|sp|Q58401|HEM4_METJA RecName: Full=Putative uroporphyrinogen-III synthase; Short=UROS;
AltName: Full=Hydroxymethylbilane hydrolyase
[cyclizing]; AltName: Full=Uroporphyrinogen-III
cosynthase
gi|1591657|gb|AAB98999.1| uroporphyrinogen III synthase (hemD) [Methanocaldococcus jannaschii
DSM 2661]
Length = 240
Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 80/242 (33%), Gaps = 22/242 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +VITRP ++A ++K G+ P++ P +++++ SY IA TS +
Sbjct: 1 MKVVITRPKERADVFASLLKKEGFEPIIFPTLEIVYNKD--LDVNLDSYDWIAFTSPSGV 58
Query: 61 STLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
L + + A +K F + N ++ E K +
Sbjct: 59 IGLYNILTENERENVKNKKIAVIGEKTAKTFKKYFGRDPDIMPNEYTAESLLREIKKVSK 118
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAI 170
++ + ++++ + ++ Y S + + +K L ++ +
Sbjct: 119 EEEKFLIPTTPSTRD-----VLKNNLNADLLFVYKSAEPENLKEDIKKLKELIAKDKFIL 173
Query: 171 LFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + + FF + + A I + +L+
Sbjct: 174 TFTSGLTAKNFFKYVDDEFAEIIKDNYIVAIGPITAKVIEKFGFKP-LIPKVYTIEGMLE 232
Query: 227 LL 228
++
Sbjct: 233 VI 234
>gi|269137475|ref|YP_003294175.1| uroporphyrinogen-III synthase [Edwardsiella tarda EIB202]
gi|267983135|gb|ACY82964.1| uroporphyrinogen-III synthase [Edwardsiella tarda EIB202]
gi|304557548|gb|ADM40212.1| Uroporphyrinogen-III synthase [Edwardsiella tarda FL6-60]
Length = 248
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 71/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP + E+++ +G PL R+ L Q + S
Sbjct: 1 MSILVTRPSPAGEQLVERLRALGMEAWHTPLIDVAPGRQLALLPEAVAALQRGDLLLAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ TP +A S + Q ++
Sbjct: 61 RHAVLYAAEALRLAGRGWPTTPRYAAIGHSTAQSLGAACHQSVIFPPAPETSEALLALPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ + + L G D L + + + +CY IAYP + +
Sbjct: 121 IRQLRARRALILRGNGGRDLIADALRARGVSVTLCECYRRVAIAYPGDELCARWRQQKVS 180
Query: 171 LF--YARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + + L +S + +S +A + VA +
Sbjct: 181 TLVVTSGEMLQQLYDLVPEYDRQRWLLSCRLIVVSERLAQRARDLGWQEIRVAESANNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRTLQ 246
>gi|2500949|sp|Q59294|HEM4_CLOJO RecName: Full=Porphyrin biosynthesis protein hemD; Includes:
RecName: Full=Uroporphyrinogen-III C-methyltransferase;
Short=Urogen III methylase; AltName: Full=SUMT; AltName:
Full=Uroporphyrinogen III methylase; Short=UROM;
Includes: RecName: Full=Uroporphyrinogen-III synthase;
Short=UROS; AltName: Full=Hydroxymethylbilane hydrolyase
[cyclizing]; AltName: Full=Uroporphyrinogen-III
cosynthase
gi|460693|dbj|BAA05862.1| uroporphyrinogen-III synthase [Clostridium josui]
Length = 504
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 82/243 (33%), Gaps = 19/243 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
I++TRP + + EK++++G PV P + ++ L + YG I +TS
Sbjct: 255 KILVTRPKESSGTLVEKLRQLGAEPVEYPCIEVVPIPQNEKLYHACENIREYGWILLTSK 314
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ +T I +G +A ++ G F + + +
Sbjct: 315 NGIQIFFDYLNSKGLDARVLANTKIGTVGSQTAKALKEVGLISDFTPEIFDGRHLALGIA 374
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
+ ++ + + L + I + Y + I +K + +
Sbjct: 375 --ERVGENEKVLICDAAIASDDIVNILRSNNIKFDRVPLYNTNYINENSNKVKKSIVHGE 432
Query: 168 -DAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
I F + S+V F + S +C+ N A A V VA S++
Sbjct: 433 LKYITFTSASTVEGFIASMKDIPLESLTAVCIGNKTAEAAKKYNLRYV-VAEKSTIDSMI 491
Query: 226 KLL 228
L
Sbjct: 492 DKL 494
>gi|271962121|ref|YP_003336317.1| uroporphyrinogen-III synthase / uroporphyrinogen- III
C-methyltransferase [Streptosporangium roseum DSM 43021]
gi|270505296|gb|ACZ83574.1| uroporphyrinogen-III synthase / uroporphyrinogen- III
C-methyltransferase [Streptosporangium roseum DSM 43021]
Length = 526
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 72/237 (30%), Gaps = 19/237 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +++ E+++ G +P +P R + Y +A T
Sbjct: 248 RVLVPRTKEQSAGLVEQLRSYGAVPEEVPTISVEPPRTPQQMDRAIKGLVTGRYEWVAFT 307
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
SS ++ + F + + A+GEA+A Q G + L
Sbjct: 308 SSNAVKAVREKFEEYGLDARAFAGLKVAAVGEATARALVQFGVKPDLMPSGEQSSDGLLA 367
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P ++ L E + Y + A P ++ +
Sbjct: 368 EWPPYDSMLDPINRVLLPRADIATETLVAGLTELGWECDDVTAYRTVRAAPPPAPIREAI 427
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+ DA+LF + S+V + + A V +A P
Sbjct: 428 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIAVIGPQTAKTAEEFGLRVDVMADRP 484
>gi|293390861|ref|ZP_06635195.1| uroporphyrinogen-III synthase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951395|gb|EFE01514.1| uroporphyrinogen-III synthase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 248
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 75/244 (30%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M +++TRP ++ + + + K G + + +PL + E L +S + S
Sbjct: 1 MVVLVTRPDERGQQLVDMLAKAGVVAIHLPLFHIESGAELNELPNKFAQLKSGDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + H N ++
Sbjct: 61 KSAVDFAFKTLTATGFVWRRDLHYFTVGQGTAQYFAATTEMPVHYPTAQENSEGLLQLNA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K ++ L G F + + + ++CY + I Y ++ + A
Sbjct: 121 MQDLSDKTVLILRGNGGRELFAEQAQQRGASVETVECYRREPIVYNNAEQTSICKRAGIQ 180
Query: 170 -ILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + + + + +S IA A V ++ +L
Sbjct: 181 TIVATSAEILTQLVDFVPQNEHNWLKSCQLITVSERIAHLAEALGWQNVAISPRADNQTL 240
Query: 225 LKLL 228
L+ L
Sbjct: 241 LQTL 244
>gi|258514535|ref|YP_003190757.1| uroporphyrin-III C-methyltransferase [Desulfotomaculum acetoxidans
DSM 771]
gi|257778240|gb|ACV62134.1| uroporphyrin-III C-methyltransferase [Desulfotomaculum acetoxidans
DSM 771]
Length = 505
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 73/249 (29%), Gaps = 23/249 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
IV+TR ++A E I+ +G P + + + + TS
Sbjct: 256 RIVVTRSREQASVLSEAIEALGGESWEFPAIKIEEPEDYTAMDSSIENIVQFDWLIFTSV 315
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ +H + AIG + Q G + + +II
Sbjct: 316 NGVKYYMDRLKQHKKDIRELKGIRLCAIGPKTKESLEQYGLLVDYVPGEYRA--EQIIEG 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
K +P ++ + L E K + + Y + + +K +L + +
Sbjct: 374 LKDKVSPGTKVLLARADIARKVLPEALRELKADVTEVVAYRTLQGSSSSELLKQMLVDKE 433
Query: 169 A--ILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + S+V F L + + N+ A
Sbjct: 434 IDAVTFTSSSTVRNFVDLLGKENRVELLNGVVLASIGPVTSQTAVEMGLNIDIEAKEYTI 493
Query: 222 TSLL-KLLP 229
L+ +LL
Sbjct: 494 NGLVQELLA 502
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 10/157 (6%), Positives = 37/157 (23%), Gaps = 8/157 (5%)
Query: 83 LARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPL 142
+ + L + + + K ++ + + + +
Sbjct: 221 AKQDDFKNPAIIIVGEVVKLREKLAWFENKPLFGKRIVVTRSREQASVLSEAIEALGGES 280
Query: 143 RVIDCYYSQDIAYPETT--MKNLLQNADAILFYARSSVLYFFSLPLPAKISAA------F 194
++ + D ++F + + V Y+ K
Sbjct: 281 WEFPAIKIEEPEDYTAMDSSIENIVQFDWLIFTSVNGVKYYMDRLKQHKKDIRELKGIRL 340
Query: 195 LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ ++ V V + +++ L +
Sbjct: 341 CAIGPKTKESLEQYGLLVDYVPGEYRAEQIIEGLKDK 377
>gi|260888476|ref|ZP_05899739.1| uroporphyrinogen III synthase/methyltransferase [Selenomonas
sputigena ATCC 35185]
gi|330838214|ref|YP_004412794.1| uroporphyrin-III C-methyltransferase [Selenomonas sputigena ATCC
35185]
gi|260861673|gb|EEX76173.1| uroporphyrinogen III synthase/methyltransferase [Selenomonas
sputigena ATCC 35185]
gi|329745978|gb|AEB99334.1| uroporphyrin-III C-methyltransferase [Selenomonas sputigena ATCC
35185]
Length = 503
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 67/246 (27%), Gaps = 20/246 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES-----VFLAMQQSYGAIAITS 56
+++TR +A + E ++ +G + +P + +A Y + TS
Sbjct: 255 RVLVTRARAQASKLTEGLEALGAACLEVPAIRIAEPSDGGAALCAAIAHVADYDWLIFTS 314
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + + AIG A+A G + ++
Sbjct: 315 ANGVEHFFRALDAAGKDARALARAKVAAIGPATANALAACGVRADCVPGEYRA--EAVVE 372
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-- 165
K ++ + + L + V Y ++ + L
Sbjct: 373 ALKGDVRSGTRILLARAEEAREVLPESLKALGAEVTVAAAYSTKQAEADGAALAKKLTSG 432
Query: 166 NADAILFYARSSVLYFFSLPL--PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D + F + S+ ++ + + A A VA
Sbjct: 433 EIDIVTFTSSSTAKNLCAILGGAEPLQHVKCVAIGPITAKTCEALGIKPAAVAKEYTIEG 492
Query: 224 LLKLLP 229
L++ +
Sbjct: 493 LIETIK 498
>gi|238918085|ref|YP_002931599.1| uroporphyrinogen-III synthase, [Edwardsiella ictaluri 93-146]
gi|238867653|gb|ACR67364.1| uroporphyrinogen-III synthase, putative [Edwardsiella ictaluri
93-146]
Length = 248
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 70/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP + +++Q +G PL F R+ L Q + S
Sbjct: 1 MSILVTRPSPDGEQLVDRLQALGMEAWHTPLINFAPGRQLAQLPEAAAALQRGDLLLAVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQK------GFTQIFHGKDNSINLAKIIVEQK 110
++ + + + A + Q ++
Sbjct: 61 RHAVLHAAESLRQAGREWPTAPRYAAIGHSTAQSLRAACRQPVIFPSAPETSEALLALPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ + + L G + L + + + +CY IA+P + +
Sbjct: 121 IQQLQSRRALLLCGNGGRELIANALHARGVSVTLCECYRRVAIAHPGDELYARWRQQKVS 180
Query: 171 LF--YARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + + L + + +S +A + VA +
Sbjct: 181 TLVVTSGEMLQQLYDLVPEYDRRRWLLGCRLIVVSERLAQRARDLGWQEIRVAESANNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRTLQ 246
>gi|51594539|ref|YP_068730.1| uroporphyrinogen-III synthase [Yersinia pseudotuberculosis IP
32953]
gi|186893537|ref|YP_001870649.1| uroporphyrinogen-III synthase [Yersinia pseudotuberculosis PB1/+]
gi|51587821|emb|CAH19423.1| uroporphyrinogen-III synthase [Yersinia pseudotuberculosis IP
32953]
gi|186696563|gb|ACC87192.1| Uroporphyrinogen III synthase HEM4 [Yersinia pseudotuberculosis
PB1/+]
Length = 249
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITS 56
M I++TRP + +++ +G + PL F R+ L ++ + S
Sbjct: 1 MTILVTRPSPAGEQLVTRLRALGRVAYHAPLIDFSPGRDLPKLPELLQDMRAGDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R+ + + + LA ++
Sbjct: 61 QNAVRYANPLLKRNKLSWPVQLSYYAIGRTTALALHTASRLHVTFPPMGETSEMLLSLPL 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
+ K + L G L E + +CY I Y + Q D
Sbjct: 121 LQNLAGKKALLLRGNGGRELLGASLAERGAAVTFCECYQRSPIYYDGSEQSAHWQRAGVD 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + ++L + + +S+ +A+ V VA +
Sbjct: 181 ILVVTSGEMLQQIYTLVPDYYRSSWLLRCRLIVVSDRLAALATQMGWTEVRVAENADNDA 240
Query: 224 LLKLLP 229
L++ L
Sbjct: 241 LIRALQ 246
>gi|118581774|ref|YP_903024.1| uroporphyrin-III C-methyltransferase [Pelobacter propionicus DSM
2379]
gi|118504484|gb|ABL00967.1| uroporphyrinogen-III C-methyltransferase [Pelobacter propionicus
DSM 2379]
Length = 509
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 65/248 (26%), Gaps = 22/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR +A + + G + P + + L Y I +TS+
Sbjct: 259 RIMVTRAAVQAGEFAGMLAQRGAAVIECPTIRLVEPEQWQPLDAALRDISGYDWIVLTSA 318
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ + A+G +A R G D ++ E
Sbjct: 319 NAVRCFFRRLDALGLDARSLAGCRVCAVGPKTAAKIRNFGINADLVSSDYKA--EGVVAE 376
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA--YPETTMKNLLQN 166
L K ++Y L + Y + PE ++
Sbjct: 377 FAKLDIRGKKILYPCADRARDLIPRELGTMGAQVDAPIAYRTVLPDRLPPEAVFALEKRS 436
Query: 167 ADAILFYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
D I F + S+V S+ A + + A V
Sbjct: 437 VDCITFTSSSTVQNLASMLGEDRMLDMLKGVAIASIGPITTRSCRALGLKVDIEPAEYTL 496
Query: 222 TSLLKLLP 229
+L +
Sbjct: 497 DALTDAIE 504
>gi|325291199|ref|YP_004267380.1| uroporphyrinogen-III C-methyltransferase; uroporphyrinogen-III
synthase [Syntrophobotulus glycolicus DSM 8271]
gi|324966600|gb|ADY57379.1| uroporphyrinogen-III C-methyltransferase; uroporphyrinogen-III
synthase [Syntrophobotulus glycolicus DSM 8271]
Length = 503
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 22/245 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
I++TR +A + I+++G + P+ +S L S + TS
Sbjct: 257 IIVTRASHQAAGLSQAIEELGGEALEFPVIKITEPADSQLLLRAMENLDSLSWLIFTSVN 316
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHG-KDNSINLAKIIVE 108
+ A R I AIG + ++G + F + + +A+ +
Sbjct: 317 GVEAFFAELGRRGKDIRELAGVKIAAIGPVTQAALTKRGLSVSFVPEEFRNEKIAEGLA- 375
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
P + ++ + + L + + Y + + +++LL+N +
Sbjct: 376 --GKLIPGERVLLARAQEASGLLPQALAASGADVWDVPVYRTVPGEADKDRLRDLLENKE 433
Query: 169 A--ILFYARSSVLYFFSLP---LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V +F L + ++A+ V + A
Sbjct: 434 IDGVTFTSPSTVSHFLRLLDGKKDLLSKVKLCSIGPVTSAALQEMGLPVFSEAKEYTVEG 493
Query: 224 LLKLL 228
L+K +
Sbjct: 494 LVKAM 498
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 7/66 (10%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
+++ R + + + + G +P+ + L + + TS
Sbjct: 383 RVLLARAQEASGLLPQALAASGADVWDVPVYRTVPGEADKDRLRDLLENKEIDGVTFTSP 442
Query: 58 ESLSTL 63
++S
Sbjct: 443 STVSHF 448
Score = 41.7 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 13/136 (9%), Positives = 38/136 (27%), Gaps = 8/136 (5%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L + + + + +I + + E + A + ++
Sbjct: 240 LREKLNWLERRPLFGQTIIVTRASHQAAGLSQAIEELGGEALEFPVIKITEPADSQLLLR 299
Query: 162 NL--LQNADAILFYARSSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVV 213
+ L + ++F + + V FF+ + +A+ +V
Sbjct: 300 AMENLDSLSWLIFTSVNGVEAFFAELGRRGKDIRELAGVKIAAIGPVTQAALTKRGLSVS 359
Query: 214 TVACFPKETSLLKLLP 229
V + + + L
Sbjct: 360 FVPEEFRNEKIAEGLA 375
>gi|257470629|ref|ZP_05634719.1| uroporphyrinogen-III synthase [Fusobacterium ulcerans ATCC 49185]
gi|317064835|ref|ZP_07929320.1| uroporphyrinogen-III synthase [Fusobacterium ulcerans ATCC 49185]
gi|313690511|gb|EFS27346.1| uroporphyrinogen-III synthase [Fusobacterium ulcerans ATCC 49185]
Length = 488
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 77/234 (32%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A +KI+KMG I V +P +V M Q Y A+ S +
Sbjct: 255 KILVTRDKKQAGEFSDKIEKMGGIAVELPFIEIESTLGTVSKDMLQDYSAVLFNSPNGVR 314
Query: 62 TLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ H I A+G + + F + ++ +
Sbjct: 315 EFMSKIDDIRILAHLKIGAVGSKTKEILESYKLKADFMPDEYLVSKLAELSLDYTKSGD- 373
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
++ + + + + + + Y ++ I + + L + + F + S
Sbjct: 374 -KILIITSDISPCNADKFNSIYDREFHKMVAYNTKKIVRNKEEVLKTLSKIEIVTFLSSS 432
Query: 177 SVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+V F+ A + F + + + +V A +L+
Sbjct: 433 TVDAFYESINGDIEAVKNMKFASIGPVTSDTMKKYGFSVNYEATVYDVNGVLEA 486
>gi|237736084|ref|ZP_04566565.1| uroporphyrinogen-III synthase [Fusobacterium mortiferum ATCC 9817]
gi|229421795|gb|EEO36842.1| uroporphyrinogen-III synthase [Fusobacterium mortiferum ATCC 9817]
Length = 488
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/236 (13%), Positives = 79/236 (33%), Gaps = 10/236 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TR ++A +KI+K+G + +P + + M +SY + S +
Sbjct: 255 KVLVTRDKRQAREFSDKIEKIGGFAIELPFIKIESTLDKIDREMLKSYSTLLFNSPNGVR 314
Query: 62 TLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
H I A+G + L + F K+ + K+ E +
Sbjct: 315 EFMNKIEDIRDIAHLKIGAVGSKTKELLERYKIKADFIPKEY--LVEKLAKEAIHYTAVE 372
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ ++ + + + I Y ++ I + + + L+ + + F + S
Sbjct: 373 EKILIITSDISPCDTKKLNSIYDRHFDKIVAYKTKKIIRDKEEVLDTLKKVEIVTFLSSS 432
Query: 177 SVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+V F + + F + + I V A +++ +
Sbjct: 433 TVDAFMESIEYDIESVKNIKFASIGPVTSETIKKYGLTVDFEAKVYDANGIIEAIK 488
>gi|258404390|ref|YP_003197132.1| uroporphyrin-III C-methyltransferase [Desulfohalobium retbaense DSM
5692]
gi|257796617|gb|ACV67554.1| uroporphyrin-III C-methyltransferase [Desulfohalobium retbaense DSM
5692]
Length = 511
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 70/251 (27%), Gaps = 25/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+V+TR ++A +++ G + P + + Y + TS
Sbjct: 254 RVVVTRAREQASSFLSLLEEKGACCLQFPTIAIEALPDYGEVQEAIGTLAEYDWLIFTSV 313
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ R + AIG A+A R+KG F + ++
Sbjct: 314 NGVIWFWKELQRAGLDSRALGGRQVAAIGPATADKLREKGIEPDFVPEKYVA--EHVVEG 371
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----NLL 164
K ++ + L E +RV+ Y + E +
Sbjct: 372 LLARGVAGKKVLLPRAEVAREVLPRQLREAGTEVRVLPVYRTGLAQQGEEEAQLLEDLQA 431
Query: 165 QNADAILFYARSSVLYFFSLPLPA------KISAAFLCLSNNIASAIPASYKNVVTVACF 218
+ F + S+V FFS S C+ A+ +
Sbjct: 432 GKVQYVTFTSSSTVENFFSRIPAETIAPYVGTSLRLACIGPITANTLQQYGFTAQVEPEE 491
Query: 219 PKETSLLKLLP 229
+L + L
Sbjct: 492 YTIPALAQALE 502
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/185 (8%), Positives = 49/185 (26%), Gaps = 9/185 (4%)
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ +L + + + + +Q + L + + +
Sbjct: 191 ETPAALVRWGTTCEQTSLAAPLHAIAEEAQKQGMRPPALLVVGQVVRLRETLGWFEKKPM 250
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILF 172
++ + + F L E + + + + L D ++F
Sbjct: 251 LGCRVVVTRAREQASSFLSLLEEKGACCLQFPTIAIEALPDYGEVQEAIGTLAEYDWLIF 310
Query: 173 YARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + V++F+ A + + + A + V +++
Sbjct: 311 TSVNGVIWFWKELQRAGLDSRALGGRQVAAIGPATADKLREKGIEPDFVPEKYVAEHVVE 370
Query: 227 -LLPL 230
LL
Sbjct: 371 GLLAR 375
>gi|332296295|ref|YP_004438218.1| uroporphyrin-III C-methyltransferase [Thermodesulfobium narugense
DSM 14796]
gi|332179398|gb|AEE15087.1| uroporphyrin-III C-methyltransferase [Thermodesulfobium narugense
DSM 14796]
Length = 500
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 76/245 (31%), Gaps = 21/245 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+V+TR KA E++++ G +P+ + + SY I +SS
Sbjct: 253 RVVVTRSRIKASLLSERLKEEGAEVFEIPVIKCVQIADQSEFDFIFNNLCSYDFIIFSSS 312
Query: 58 ESLSTLPANFCR--------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ N R + I IG+ ++ + G +A+ +V+
Sbjct: 313 TGVDIFFENLFRSGYDSRCIRSKIAVIGDGTSEALLKYGIRADIVPDK---FVAESLVDS 369
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
K ++ K L+E + Y Q + ++ + Q
Sbjct: 370 IEKTNEPKKILIPRAKEGRDELVRGLLEKGYVVDDFHIYSVQPEKILKDEVEKVFQDEKE 429
Query: 168 DAILFYARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + + YF+ A + + + NVV A
Sbjct: 430 TFITFASSKTAEYFYESLGEHKDIALRKAKVVSIGPITSEKAKNLGFNVVAQAEEYNING 489
Query: 224 LLKLL 228
L+K L
Sbjct: 490 LVKAL 494
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 7/136 (5%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT-- 159
L + + K ++ + + + L E + I IA
Sbjct: 237 LRDDLTWFEKKLLFGKRVVVTRSRIKASLLSERLKEEGAEVFEIPVIKCVQIADQSEFDF 296
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLPAK-----ISAAFLCLSNNIASAIPASYKNVVT 214
+ N L + D I+F + + V FF + I + + + + A+
Sbjct: 297 IFNNLCSYDFIIFSSSTGVDIFFENLFRSGYDSRCIRSKIAVIGDGTSEALLKYGIRADI 356
Query: 215 VACFPKETSLLKLLPL 230
V SL+ +
Sbjct: 357 VPDKFVAESLVDSIEK 372
>gi|225872373|ref|YP_002753828.1| uroporphyrinogen-III synthase [Acidobacterium capsulatum ATCC
51196]
gi|225792156|gb|ACO32246.1| uroporphyrinogen-III synthase [Acidobacterium capsulatum ATCC
51196]
Length = 275
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 83/260 (31%), Gaps = 34/260 (13%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
I++TR +A R + +G PV +P + L SY I +TS+
Sbjct: 15 RILVTRAEHQAGRLSHILASLGAEPVEVPAIRILPPDTYEPLDHALRTLSSYDWIILTSA 74
Query: 58 ESLSTL-----------------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI 100
+++ + A + I A+G ++A A + +
Sbjct: 75 NTVNAMLSRIEQLGMVSPASQTGQAIYGPMPKIAAVGPSTAKAAARVRWNIDLMPDK--- 131
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+A+ ++E + ++ + L E + L V++ Y ++ +
Sbjct: 132 YVAESLLEALGDKLRGQRVLLARSSRSRDVIPEALREQGVNLDVVEAYRTEIPEESLAQI 191
Query: 161 KNLL-----QNADAILFYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYK 210
+ L A F + S+V FF L + ++ + + + +
Sbjct: 192 RTLFGDGRPHGLAAATFTSSSTVDNFFKLMRASGLAFVPSTLPAISIGPITSKTLRDHAW 251
Query: 211 NVVTVACFPKETSLLKLLPL 230
A L+ +
Sbjct: 252 EPSAEADPHSVDGLVDAVVR 271
>gi|148262441|ref|YP_001229147.1| uroporphyrin-III C-methyltransferase [Geobacter uraniireducens Rf4]
gi|146395941|gb|ABQ24574.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Geobacter uraniireducens Rf4]
Length = 510
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 60/242 (24%), Gaps = 22/242 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+++TR +A + G P + +A S+ + TS
Sbjct: 262 VLVTRAADQAGEFSRLLAGYGAQVFECPTIRIVPPESFDGLDGAIASLPSFAWLIFTSCN 321
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++S+ I A+G +A G D +I
Sbjct: 322 AVSSFFTRLHDRGLDSRAIGPCRICAVGPKTAAALSTYGIIADLVPADYKA--EGVIEAF 379
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ L K +++ L + + Y + + L+
Sbjct: 380 RSLDMNGKRVLFPKADRARDLIPTELQKMGAEIEAPVAYRNVIPEALPSEALQALEERRI 439
Query: 170 --ILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
I F + S+ ++ ++ + + V
Sbjct: 440 RCITFTSSSTAQNLAAMLGENRLLNLLEGVTIASIGPITSRTCRELGLPVDIEPPAYTLE 499
Query: 223 SL 224
+L
Sbjct: 500 AL 501
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/154 (9%), Positives = 39/154 (25%), Gaps = 8/154 (5%)
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
+ N + L + K ++ + F L +
Sbjct: 225 KARKAAFKAPAITVVGNVVTLRDKLRWFDNRPLFGKGVLVTRAADQAGEFSRLLAGYGAQ 284
Query: 142 LRVIDCYYSQDIAYPE--TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL---- 195
+ + L + ++F + ++V FF+ + + +
Sbjct: 285 VFECPTIRIVPPESFDGLDGAIASLPSFAWLIFTSCNAVSSFFTRLHDRGLDSRAIGPCR 344
Query: 196 --CLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ A+A+ V K +++
Sbjct: 345 ICAVGPKTAAALSTYGIIADLVPADYKAEGVIEA 378
>gi|237744689|ref|ZP_04575170.1| uroporphyrinogen-III synthase [Fusobacterium sp. 7_1]
gi|229431918|gb|EEO42130.1| uroporphyrinogen-III synthase [Fusobacterium sp. 7_1]
Length = 485
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 79/236 (33%), Gaps = 14/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR KKA+ E I K G IPV +P + + + L + Y AI S +
Sbjct: 253 KILVTRDKKKAVEISENISKRGGIPVELPFIEIENLK--IDLKDLKKYKAILFNSPNGVR 310
Query: 62 TLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDN-SINLAKIIVEQKVLFTP 115
N + I A+G + + + F + LA+ +V+
Sbjct: 311 AFFENIKDIRCLANIKIGAVGVKTEEILEKYKIIPDFIPDEYLVDKLAEEVVKYTNENDN 370
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + Y +K + Y ++ I + L++ D I F +
Sbjct: 371 ---ILIVTSDISPCDTNKYNSLYKRNYEKVVAYNTKKIKIDREKVLETLKDVDIITFLSS 427
Query: 176 SSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F+ + + + I V A LL ++
Sbjct: 428 STVEAFYESLDGNFFILGDKKIVSIGPMTSETIRRLGMKVDYEAEKYTADGLLDVI 483
>gi|297182327|gb|ADI18495.1| uroporphyrinogen-III methylase [uncultured Verrucomicrobiales
bacterium HF4000_13K17]
Length = 509
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 74/247 (29%), Gaps = 20/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+V+TR + A ++ ++G + +P + + L SY + TS
Sbjct: 257 RVVVTRTRQHASALSSQLAELGAEVLEIPTIRIEDPDDKLALKDGLLGLGSYQWLIFTSP 316
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNS-INLAKIIV 107
+ F + I A+G +A + +D + +AK
Sbjct: 317 TGVDRFFEYFLKAFDDIRDIGGCRIAAVGPVTAAKLQALHLKIDLMPEDYTAAGVAKAFQ 376
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN- 166
+ K + + N L + + I Y + T ++L+
Sbjct: 377 KSKDYTIENNNVALFRAQIANPELPKALEKLGAIVDDIPVYKTVPETEDVTGTVSMLEEA 436
Query: 167 -ADAILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
AD I F + S+V F + + + + + + A
Sbjct: 437 GADWITFTSSSTVENFNARFGIVQSLEQHGMKPISIGPETSKTLRDLGVEPAIEASAHTI 496
Query: 222 TSLLKLL 228
++ L
Sbjct: 497 PGVVAAL 503
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 14/140 (10%), Positives = 40/140 (28%), Gaps = 10/140 (7%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L + + + + ++ + L E + + + + +K
Sbjct: 241 LREKLNWFEKRSLFGQRVVVTRTRQHASALSSQLAELGAEV-LEIPTIRIEDPDDKLALK 299
Query: 162 NLL---QNADAILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNV 212
+ L + ++F + + V FF L A + A+ + A + +
Sbjct: 300 DGLLGLGSYQWLIFTSPTGVDRFFEYFLKAFDDIRDIGGCRIAAVGPVTAAKLQALHLKI 359
Query: 213 VTVACFPKETSLLKLLPLRR 232
+ + K +
Sbjct: 360 DLMPEDYTAAGVAKAFQKSK 379
>gi|260771622|ref|ZP_05880542.1| uroporphyrinogen-III synthase [Vibrio metschnikovii CIP 69.14]
gi|260613399|gb|EEX38598.1| uroporphyrinogen-III synthase [Vibrio metschnikovii CIP 69.14]
Length = 240
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 70/239 (29%), Gaps = 12/239 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL-AMQQSYGAIAITSSES 59
M I++TRP + + +Q+ G+ + PL + L + SY I + S +
Sbjct: 1 MAILVTRPEPQGEALCQLLQQHGHHALHHPLIRIDAGMDLALLRSELSSYEVIVVASQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGF-----TQIFHGKDNSINLAKIIVEQKVLFT 114
+S + + + ++ +Q + ++ +
Sbjct: 61 VSWVKHTLQAERLSWPTSAIYVAIGQKTAQVLSKASQQLVHYPEISDSEHLLALPALQSV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILF 172
K ++ G L + + + Y + + + T Q N D ++
Sbjct: 121 AGKRVVIWRGNGGRELIYQTLQQRGANVDYREMYQRRPLPFDGETALARWQAANVDTLII 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + +F S + L S IA + L+
Sbjct: 181 TSGEQLAFFCSQLPRKAQAWTRTLRLLIPSQRIAEQARELGFQHTVITGSAANRDLVAA 239
>gi|254303621|ref|ZP_04970979.1| uroporphyrin-III C-methyltransferase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148323813|gb|EDK89063.1| uroporphyrin-III C-methyltransferase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 485
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 80/236 (33%), Gaps = 14/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A+ E I K G IPV +P + + + L + Y AI S +
Sbjct: 253 KILVTRDKKQAVEMSENISKRGGIPVELPFIEIENLK--IDLKDLEKYKAILFNSPNGVK 310
Query: 62 TLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDN-SINLAKIIVEQKVLFTP 115
N + I A+G + + + F + LA+ +V+
Sbjct: 311 AFFENIKDIRCLANIKIGAVGVKTKEILEKYKIVPDFVPDEYLVDRLAEDVVKYTNENDN 370
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + + Y+ +K + Y ++ + + L++ D I F +
Sbjct: 371 ---ILIVTSDISPCDTDKYISLYKRNYEKVVAYNTKKLKVDREKVLETLKDLDIITFLSS 427
Query: 176 SSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F+ + + I V A +L ++
Sbjct: 428 STVEAFYESLDGNFFILGDKKIASIGPMTSETIRRLGMKVDYEAEKYTANGVLDVI 483
>gi|238793583|ref|ZP_04637207.1| Uroporphyrinogen-III synthase [Yersinia intermedia ATCC 29909]
gi|238727173|gb|EEQ18703.1| Uroporphyrinogen-III synthase [Yersinia intermedia ATCC 29909]
Length = 246
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 17/242 (7%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSSESL 60
+TRP + +++ +G + PL F + L Q+ + S ++
Sbjct: 2 VTRPSPAGEQLVSRLRALGRVAYHAPLIDFSPGYDLPKLPALLQDMQAGDLVFALSQNAI 61
Query: 61 STLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
R+ ++ + LA ++ +
Sbjct: 62 RYANPLLKRNNLLWPAQLSYYAIGRTTALALHTASRLHVTFPPMGETSEMLLSLPDLQKL 121
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILF 172
K + L G + L + + +CY I Y + Q D ++
Sbjct: 122 SGKKALLLRGNGGRELLGESLAQRGAIVTYCECYQRSPIFYDGSEQSAHWQRAGVDILVV 181
Query: 173 YARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + ++L + + +S +A+ + + VA +L++
Sbjct: 182 TSGEMLQQIYTLVPDYYRSSWLLRCRLVVVSERLATLAAQMGWSNIRVAENADNDALIRA 241
Query: 228 LP 229
L
Sbjct: 242 LQ 243
>gi|158523072|ref|YP_001530942.1| uroporphyrin-III C-methyltransferase [Desulfococcus oleovorans
Hxd3]
gi|158511898|gb|ABW68865.1| uroporphyrin-III C-methyltransferase [Desulfococcus oleovorans
Hxd3]
Length = 512
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 65/248 (26%), Gaps = 24/248 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
IV+TR +A + ++G + P + + +Y + TS
Sbjct: 261 IVVTRARAQASDFIAALSRLGAACIECPTIRVAPPDDTAPLDTAIDNLAAYDWLVFTSVN 320
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ A H IG A+ G + +
Sbjct: 321 GVDRFFARLFEKGGDVRRLGHLKTAVIGPATEQRLLDFGVKSDIVPESFRAESV--VEAF 378
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--A 167
K ++ + L + + + Y ++ T+ L++
Sbjct: 379 TRQDVKGKSVLLPRAAEARPILPEELTKMGARVDEVAAYVTRQDDSAAKTLTEALESGAV 438
Query: 168 DAILFYARSSVLYFFSLPLPAK-------ISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
D + F + S+V F +L K + A + V A
Sbjct: 439 DMVTFTSSSTVKNFKALLPKDKSTADRLIKNVAVASIGPITTETAKDEGFAVHVTADAYT 498
Query: 221 ETSLLKLL 228
L + +
Sbjct: 499 IEGLTRAI 506
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 12/123 (9%), Positives = 29/123 (23%), Gaps = 8/123 (6%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILFYA 174
K ++ + + F L T + L D ++F +
Sbjct: 259 KTIVVTRARAQASDFIAALSRLGAACIECPTIRVAPPDDTAPLDTAIDNLAAYDWLVFTS 318
Query: 175 RSSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ V FF+ + + V + S+++
Sbjct: 319 VNGVDRFFARLFEKGGDVRRLGHLKTAVIGPATEQRLLDFGVKSDIVPESFRAESVVEAF 378
Query: 229 PLR 231
+
Sbjct: 379 TRQ 381
>gi|320106347|ref|YP_004181937.1| Uroporphyrinogen III synthase HEM4 [Terriglobus saanensis SP1PR4]
gi|319924868|gb|ADV81943.1| Uroporphyrinogen III synthase HEM4 [Terriglobus saanensis SP1PR4]
Length = 252
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 78/244 (31%), Gaps = 19/244 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV-----FLAMQQSYGAIAITS 56
I++TR +A + + + G+ V +P + +S L + + I TS
Sbjct: 6 RILVTRAKHQASALADALAERGFEVVAIPAIEIVPPEDSYRALDWALRTVERFEWIVFTS 65
Query: 57 SESL-------STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ ++ L I AIG+A+A + G +A+ + E
Sbjct: 66 ANAVEVFASRLEFLDLPVPDTLQIAAIGQATARALTELGLQVDVIPPT---AVAESLAEA 122
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ + L + V Y + +++ L + DA
Sbjct: 123 LAPHVADTHVLLIRAAEAREVLVPQLEAVGAKVTVAAAYRTVVPEDSAESLRTELGDIDA 182
Query: 170 ILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F + SSV L A+ + A + + A+ S A +L
Sbjct: 183 FTFTSASSVRNLGILLHSAEVTLPMEAVMASIGPVTSQAMRESGWEPTVEAQEASVAALA 242
Query: 226 KLLP 229
+ L
Sbjct: 243 EALK 246
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 7/123 (5%)
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE---TTMKNLLQNADAI 170
+K ++ K + D L E + I ++ + I
Sbjct: 2 PDRKRILVTRAKHQASALADALAERGFEVVAIPAIEIVPPEDSYRALDWALRTVERFEWI 61
Query: 171 LFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+F + ++V F S + + A A+ V + SL +
Sbjct: 62 VFTSANAVEVFASRLEFLDLPVPDTLQIAAIGQATARALTELGLQVDVIPPTAVAESLAE 121
Query: 227 LLP 229
L
Sbjct: 122 ALA 124
>gi|259906880|ref|YP_002647236.1| Uroporphyrinogen III synthase [Erwinia pyrifoliae Ep1/96]
gi|224962502|emb|CAX53957.1| Uroporphyrinogen III synthase [Erwinia pyrifoliae Ep1/96]
gi|283476673|emb|CAY72501.1| uroporphyrinogen III synthase [Erwinia pyrifoliae DSM 12163]
Length = 249
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 79/247 (31%), Gaps = 17/247 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP A ++++ G + PL F ++ L ++ + I S
Sbjct: 1 MSILVTRPSPAADELVSRLRQRGDVAWAFPLIEFAPGKQLDILPDRLKALKAGDLVFILS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK------IIVEQK 110
+ F R P + + R G + + +I
Sbjct: 61 QHVIHYARPTFTREDPPWPASLDYYAIGRSTGLAFHAASGHHVSWPHEQETSEVLIQLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L+ + I+CY + Y E + Q D
Sbjct: 121 LQAVAGKRALILRGNGGRELLAETLLSRGAQVEFIECYQRRAKHYHGAEEARRWRNQGID 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + + +S +A+ V VA +
Sbjct: 181 TLVVTSGEMLQQLYSLFPDVDRDEWLLHCRLVVVSGRLATLARKLGWVNVDVAGGADNDA 240
Query: 224 LLKLLPL 230
LL+ L L
Sbjct: 241 LLRSLSL 247
>gi|149191475|ref|ZP_01869724.1| uroporphyrinogen-III synthetase [Vibrio shilonii AK1]
gi|148834663|gb|EDL51651.1| uroporphyrinogen-III synthetase [Vibrio shilonii AK1]
Length = 252
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 72/241 (29%), Gaps = 11/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES-VFLAMQQSYGAIAITSSES 59
M +++TRP + I+KMG I + PL + + + Q I S +
Sbjct: 1 MRVLVTRPENQGEELCNLIEKMGGIALHQPLIDIQDNLQLCLDDDQLQRSDIIIAVSQYA 60
Query: 60 LSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ +G +Q + ++ ++
Sbjct: 61 VYAFHHILSHQQLSLPDSCIYLGVGQKTAHELSKLSQQNVNYPTVSDSEHLLALPELANV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFY 173
K +I L G D L ++ ++ Y + + +K D ++
Sbjct: 121 SGKHVIILRGNGGRELIYDQLCALGADVQYLETYQRRYLPLKIDAIKQWRSMGIDTLVVT 180
Query: 174 ARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + + S +++ L S IA+ N VT +++ L
Sbjct: 181 SGEQLEFLLSQVSEPELNWLTQQQLLVPSERIATLAMTKGFNNVTNTQGASNSTIFAALQ 240
Query: 230 L 230
Sbjct: 241 R 241
>gi|284047315|ref|YP_003397655.1| uroporphyrin-III C-methyltransferase [Conexibacter woesei DSM
14684]
gi|283951536|gb|ADB54280.1| uroporphyrin-III C-methyltransferase [Conexibacter woesei DSM
14684]
Length = 492
Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 70/238 (29%), Gaps = 18/238 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+ +TR +A +++ +G + P + V L Y + +TS ++
Sbjct: 255 VAVTRARAQASGLAARLRALGADALETPAIRIVPVDPGVALDP-SGYDLVCLTSPNGVAK 313
Query: 63 LPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
L I AIG +A R+ G + +A+ +VE +
Sbjct: 314 LFERLAAGGRDARALAGARIAAIGPGTARALREHGVIADVVPE---RFVAEALVEA-LAD 369
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
P + + D L + V++ Y + + F
Sbjct: 370 VPVSRALVARARVARDVLPDALRARGAEVDVVELYETVAEPLGDDARGAARAADYV-TFT 428
Query: 174 ARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V +F A + + ++ + A L+ L
Sbjct: 429 SSSTVRFFLDALGGADGLGERTRIVSIGPVTSATLRELGLEPHVEAAQHDVDGLVAAL 486
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 16/66 (24%), Gaps = 6/66 (9%)
Query: 170 ILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + + V F A + A A+ V +
Sbjct: 303 VCLTSPNGVAKLFERLAAGGRDARALAGARIAAIGPGTARALREHGVIADVVPERFVAEA 362
Query: 224 LLKLLP 229
L++ L
Sbjct: 363 LVEALA 368
>gi|72163130|ref|YP_290787.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Thermobifida fusca YX]
gi|71916862|gb|AAZ56764.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Thermobifida fusca YX]
Length = 563
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 74/239 (30%), Gaps = 20/239 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A E+++ G +P +P R + Y +A T
Sbjct: 282 RVLVPRTRQQAPALSEQLRSYGAVPEEVPTISVEPPRTPQQMERAVRGLVTGRYQWVAFT 341
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN---LA 103
S ++ + + + A+GE +A R G ++ + L
Sbjct: 342 SVNAVKAIRERIEDYGLDARAFAGVKVAAVGEQTAAALRAFGIHPDLQPPEDKQSAAGLV 401
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ P + ++ + L+ + + Y + A P ++
Sbjct: 402 EVWPPYDPDIDPIERVLLPRADIATEVLSEGLVNLGWEVDDVTAYRTVRAAPPPAPIREA 461
Query: 164 LQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
++ DA++F + S+V + + + A V A
Sbjct: 462 IKGGGFDAVMFTSSSTVRNLVGIAGKPHATTVIAVIGPETAKTAEEFGLRVDVRAPKAS 520
>gi|188532368|ref|YP_001906165.1| Uroporphyrinogen III synthase [Erwinia tasmaniensis Et1/99]
gi|188027410|emb|CAO95257.1| Uroporphyrinogen III synthase [Erwinia tasmaniensis Et1/99]
Length = 245
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 75/245 (30%), Gaps = 17/245 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I++TRP A +++ G + PL F DR L ++ + I S
Sbjct: 1 MSILVTRPAPAADELVSRLRLQGRVAWSFPLIEFTPGTQLDRLPDRLEALEAGDLVFILS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ F R + S LA + +I
Sbjct: 61 QHVIHYAQPTFNRLESTWPASLNYYAIGRSTALAFHAASGRQVSWPHEQETSEILIQLPD 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L+ + I+CY + Y E + Q D
Sbjct: 121 LQVVTGKRALILRGNGGRELLAETLLNRGAKVEFIECYQRCNKHYHGAEEGRRWRNQGID 180
Query: 169 AILFYARSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + + +S +A+ + VA +
Sbjct: 181 TLVVTSGEMLQQLYSLFTDIDRDEWLLHCRLVIVSERLATLARKLGWANIDVADGADNDA 240
Query: 224 LLKLL 228
LL+ +
Sbjct: 241 LLRAI 245
>gi|261345250|ref|ZP_05972894.1| uroporphyrinogen-III synthase [Providencia rustigianii DSM 4541]
gi|282566948|gb|EFB72483.1| uroporphyrinogen-III synthase [Providencia rustigianii DSM 4541]
Length = 251
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 67/244 (27%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M +++TRP I G PL E L+ + + S
Sbjct: 1 MRVLVTRPEPSGSELITAINATGNEAYASPLIKIGAGAELNLLSQHLDGLSENDLVFLLS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + ++ S Q+ + ++ ++
Sbjct: 61 KNAVWYANLRLQQTGRNWSDKLSYYGIGRSTGHYFQQITGKPIRWAESGETSEVLLTHPD 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + L G L + +CY + Y + +AD
Sbjct: 121 LQCLAGKRALLLRGNGGRELLASTLKARDAEVDYCECYARHPVQYDKIEFNQKWFHADIT 180
Query: 170 -ILFYARSSVLYFFSL----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + L S L +S IA + V V+ ++L
Sbjct: 181 DIVITSGQMLALLNELLAENMKQWWFSRRLLVVSERIAEQARQNGWRRVCVSNSADNSAL 240
Query: 225 LKLL 228
L+ L
Sbjct: 241 LEAL 244
>gi|226311391|ref|YP_002771285.1| uroporphyrinogen-III synthase [Brevibacillus brevis NBRC 100599]
gi|226094339|dbj|BAH42781.1| uroporphyrinogen-III synthase [Brevibacillus brevis NBRC 100599]
Length = 270
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 73/245 (29%), Gaps = 21/245 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I++TR + E+I+++G PL + ++ L ++ + TS
Sbjct: 15 IMVTRARSQVRELVEQIERLGGEAYAFPLLKMMPPTDTAKLDEAITQLPAFDWVVFTSVN 74
Query: 59 SLSTLPANFCR--------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ I A+G +A G D ++
Sbjct: 75 GVRFFLERMREVGVGLEAFTGKIAAVGPKTAKALEHHGLEVAVIPSDYVA--EGLLSSLY 132
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
P + ++ L + + +D Y++ A LQ D
Sbjct: 133 DQLLPGQRVLLPRADIARKALPKELARLGLAVTEVDVYHTVIDAEHAPEAAEKLQQGLID 192
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
ILF + S+V +F + P C+ A + +V VA
Sbjct: 193 IILFTSSSTVTHFMAAMEPYASLDWLKHVQIACIGPITADTAKQNGLSVHAVASEYTVEG 252
Query: 224 LLKLL 228
LL +
Sbjct: 253 LLAAI 257
>gi|309790864|ref|ZP_07685408.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Oscillochloris trichoides DG6]
gi|308227151|gb|EFO80835.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Oscillochloris trichoides DG6]
Length = 266
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 80/244 (32%), Gaps = 20/244 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAIT 55
+VITR KA +++++G P+ P ++ +S L + +Y + +T
Sbjct: 18 RVVITRSAGKADGMATRLRELGAEPITYPTIAYVPPADSTALDAALARLVAGAYDWLLVT 77
Query: 56 SSESLSTLPANF-----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S++ + L + + A+G A+A ++ +A+ +
Sbjct: 78 SAQVVRVLAERISFAQPPANLKVAAVGPATAKACTKRLGL--TPATVPDQFIAEGLAAS- 134
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K ++ E +L + + Y++ M +L +
Sbjct: 135 LGDLSGKRVLLPNADIARPVLEQHLRAAGAEVDRVIAYHTVTAPDNGVDMAAMLAAGEIA 194
Query: 170 -ILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ F + S+V F P C+ A VA E L
Sbjct: 195 ALTFTSGSTVRAFIEKVGPDAVALMQKTILACIGPATAVVCQEFGLEPQVVAEVYTEEGL 254
Query: 225 LKLL 228
L+ L
Sbjct: 255 LESL 258
>gi|3172406|gb|AAC18588.1| uroporphyrinogen-III methyltransferase/uroporphyrinogen-III
synthase [Paenibacillus macerans]
Length = 511
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 58/246 (23%), Gaps = 19/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR------ESVFLAMQQSYGAIAIT 55
I++TR +A I+++G P P+ L+ ++Y T
Sbjct: 256 RILVTRSRSQASDLVRGIEELGGEPYEFPVIQISMPSGAALERTDEALSRLETYDWAFFT 315
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI----NLAKIIVEQKV 111
S + + R + G A+ ++
Sbjct: 316 SVNGVDYFFKHLERLGKDIRALYKAIAAVGGHAGALRERGIAAEELPGRFQAEPCWKRTA 375
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI- 170
P C + + LL+
Sbjct: 376 RSLCPAKAYCCRTGILPGRGCRSCAIKGWPSPRRSCMRRVPAGEKDEELIKLLEKGRIHA 435
Query: 171 -LFYARSSVLYFFSLPLPAKISAA-------FLCLSNNIASAIPASYKNVVTVACFPKET 222
F + S+V + + + C+ A + V +A
Sbjct: 436 VTFTSSSTVTHLLAALSGMGVRPVAALRGREIACIGPVTARTAEEAGLRVSILAKEATIP 495
Query: 223 SLLKLL 228
SL++ L
Sbjct: 496 SLIEAL 501
>gi|302342251|ref|YP_003806780.1| uroporphyrin-III C-methyltransferase [Desulfarculus baarsii DSM
2075]
gi|301638864|gb|ADK84186.1| uroporphyrin-III C-methyltransferase [Desulfarculus baarsii DSM
2075]
Length = 509
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 71/252 (28%), Gaps = 26/252 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
+++TR +A + ++ +G V P + A Y + TS+
Sbjct: 254 RVLVTRARAQASKLSAGLRALGAEVVECPTIEIRPMPDDGQLRWAAAHAADYDWVLFTSA 313
Query: 58 ESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ T I AIG A+A ++G K ++
Sbjct: 314 NAVEPFLQALLARGRDVRALHRTKIGAIGPATAQALARRGLKYDLMAKSFVA--EGLLEA 371
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN-LLQNA 167
K ++ + L + + ++ Y + A + ++ +
Sbjct: 372 LADHDLAGKKVLLPRATRARDVLPEELRKRGALVDIVAAYETFAPAGAKERLEAIMADGL 431
Query: 168 DAILFYARSSVLYFFSLPLP----------AKISAAFLCLSNNIASAIPASYKNVVTVAC 217
I F A S+V + A + + + + V
Sbjct: 432 GVITFTASSTVDNLMDMLDEPTKAKLIAESASGALIVASIGPITSQSARRHGMTVHVEPA 491
Query: 218 FPKETSLLKLLP 229
+L++ L
Sbjct: 492 EYTIPALIEALA 503
>gi|332981814|ref|YP_004463255.1| uroporphyrinogen-III C-methyltransferase; uroporphyrinogen-III
synthase [Mahella australiensis 50-1 BON]
gi|332699492|gb|AEE96433.1| uroporphyrinogen-III C-methyltransferase; uroporphyrinogen-III
synthase [Mahella australiensis 50-1 BON]
Length = 508
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 77/246 (31%), Gaps = 21/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
I++TR + ++++G P+ + + Y + TS+
Sbjct: 256 IMVTRADGQREDLARGLERLGAQVEHFPVISIKPPDDYGPLDEAIEFISQYKWLIFTSAN 315
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + H + AIG + +Q G + + S + +++
Sbjct: 316 GVESFFDRLLYHGMDSRYIAGIKVGAIGSGTYATLKQHGVIADYMPESFSTDDLASGLKE 375
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ ++ + + L + ++ Y + A + +LL +
Sbjct: 376 QITLGM--RILLPCSDIAGLNIKQTLECAGAVVDMVTAYRTVPNAQQSQRLIDLLGDHYI 433
Query: 170 --ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V F ++ +S + ++A+ V A
Sbjct: 434 DAITFTSSSTVHNFVNILGVGNVSLLDGVKLASIGPVTSAALRQYGLKVDMQADVYTIDG 493
Query: 224 LLKLLP 229
L+ L
Sbjct: 494 LIGALK 499
>gi|240949413|ref|ZP_04753754.1| uroporphyrinogen-III synthase [Actinobacillus minor NM305]
gi|240296162|gb|EER46818.1| uroporphyrinogen-III synthase [Actinobacillus minor NM305]
Length = 248
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 69/248 (27%), Gaps = 18/248 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M I++TRP ++ +Q+ + PL RE L + S
Sbjct: 1 MNILVTRPDERGQELVNLLQQQQIFAIHQPLFTIESGRELPLLPSLFSQLNEGDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + Q N ++ +
Sbjct: 61 KNAVDFAHQTMTQTGFKFRSDLHYFSVGQRTATHFAGKSEQAVKYPICFENSEGLLELPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L + F ++ ++ ++CY A E D
Sbjct: 121 MQNIQGKNIVILRAETGREFFAKEAVKRGASVQNVECYRRVPSAENLSEKLSLAKRVGID 180
Query: 169 AILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKET 222
I+ + + +S + + + IA+ S + + V+
Sbjct: 181 TIIVTSSEILASLIENTVDEDKDWLLSCKLIVIGHRIATIAKQSGWGSDKIMVSPKADNQ 240
Query: 223 SLLKLLPL 230
S+L +L
Sbjct: 241 SILDILTK 248
>gi|310766128|gb|ADP11078.1| Uroporphyrinogen III synthase [Erwinia sp. Ejp617]
Length = 249
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 79/247 (31%), Gaps = 17/247 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP A ++++ G + PL F ++ L ++ + I S
Sbjct: 1 MSILVTRPSPAADELVSRLRQRGDVAWAFPLIEFAPGKQLDILPDRLKALKAGDLVFILS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK------IIVEQK 110
+ F R P + + R G + + +I
Sbjct: 61 QHVIHYARPTFTREDPPWPASLDYYAIGRSTGLAFHAASGHHVSWPHEQETSEVLIQLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L+ + I+CY + Y E + Q D
Sbjct: 121 LQAVAGKRALILRGNGGRELLAETLLSRGAQVEFIECYQRRAKHYHGAEEARRWRNQGID 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +SL + + +S +A+ V VA +
Sbjct: 181 TLVVTSGEMLQQLYSLFPDVDRDEWLLHCRLVVVSGRLATLAQKLGWVNVDVAGGADNDA 240
Query: 224 LLKLLPL 230
LL+ L L
Sbjct: 241 LLRSLSL 247
>gi|315634980|ref|ZP_07890261.1| uroporphyrinogen-III synthase [Aggregatibacter segnis ATCC 33393]
gi|315476242|gb|EFU66993.1| uroporphyrinogen-III synthase [Aggregatibacter segnis ATCC 33393]
Length = 248
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/244 (14%), Positives = 76/244 (31%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYF----IHDRESVFLAMQQSYGAIAITS 56
M +++TRP ++ + E + K G + + +PL + LA + + S
Sbjct: 1 MAVLVTRPDERGEQLVEMLVKAGIVALHLPLFQITRGAELNELPARLARLKPGDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + S H N ++
Sbjct: 61 KNAVDFADKAIKNTGFKWRDDLSYFAVGKSTAQYFAAMTEMAVHYPTTQENSEGLLQISM 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
+ +K ++ L G F + + + +++CY + + Y + +L +
Sbjct: 121 MQDLSEKTVLILRGNGGREFFAEQAQQRGGSIEIVECYRREPLVYNQAEQTSLCKRAGVQ 180
Query: 169 AILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + S + +S IA A VTV +L
Sbjct: 181 TIVVTSAEILTQLVDFVPQSEHNWLKSCHLITISERIAHLAQALGWQQVTVCPCSDNRTL 240
Query: 225 LKLL 228
L+ L
Sbjct: 241 LQTL 244
>gi|256811428|ref|YP_003128797.1| Uroporphyrinogen III synthase HEM4 [Methanocaldococcus fervens
AG86]
gi|256794628|gb|ACV25297.1| Uroporphyrinogen III synthase HEM4 [Methanocaldococcus fervens
AG86]
Length = 243
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 81/244 (33%), Gaps = 24/244 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +VITRP ++A + ++K G+ P++ P I++++ +Y I TS +
Sbjct: 1 MKVVITRPKERADVFSKLLKKEGFEPIIFPTLELIYNKD--IKVNLDNYDWIVFTSPSGV 58
Query: 61 STLPANFC-------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
L ++ I IGE +A ++ ++ ++ E K
Sbjct: 59 IGLYNIIEEAQREEVKNKKIAVIGEKTAKAFKEYFGREVDVMPKEY-TAESLLEEIKKTA 117
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD----A 169
+ ++++ + ++ Y S + + ++ L +N
Sbjct: 118 KSDDKFLIPTTPSTRD-----VLKNNLNADLLFVYKSVEPENLKENIEKLKENIKDERFI 172
Query: 170 ILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ F + + FF + + A I + +L
Sbjct: 173 LTFTSGLTAKNFFKYVDDEFAEIIKNNYIVAIGPITAKVIEEFGFKP-LIPKIYTIEGIL 231
Query: 226 KLLP 229
+++
Sbjct: 232 EVIK 235
>gi|294637950|ref|ZP_06716218.1| uroporphyrinogen-III synthase [Edwardsiella tarda ATCC 23685]
gi|291088911|gb|EFE21472.1| uroporphyrinogen-III synthase [Edwardsiella tarda ATCC 23685]
Length = 248
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 71/246 (28%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP + E+++ G PL + + LA + S
Sbjct: 1 MSILVTRPSPAGEQLVERLRAAGMAAWHSPLIDYAPGAQLAQLPERLAELAPGDLLLAVS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + R + + A Q Q D+ ++
Sbjct: 61 RPAVQYASSRLQRAGLPWPPTLRYLAIGHTTAQALQAASGQSVIYPDHGETSEALLALPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD--IAYPETTMKNLLQNAD 168
+ + + L G L H + + + +CY + + + Q
Sbjct: 121 LQSLNARRALILRGNGGRELIAATLRAHGVTVTLCECYQRRPCIPPGSDHYRRWQQQKIS 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + + L + + +S +A + VA +
Sbjct: 181 TLVVTSGEMLQQLYDLVPEYDRRHWLLCCRLIVVSERLAQRARDLGWQEIRVADSANNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRTLQ 246
>gi|222054397|ref|YP_002536759.1| uroporphyrin-III C-methyltransferase [Geobacter sp. FRC-32]
gi|221563686|gb|ACM19658.1| uroporphyrin-III C-methyltransferase [Geobacter sp. FRC-32]
Length = 516
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 62/250 (24%), Gaps = 22/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
IV+TR +A + G P + +A S+ + TS
Sbjct: 264 NIVVTRAADQAGDFSRLLAGFGATVHECPTIRIVPPESFTELDGAIAELVSFHWLVFTSY 323
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++S+ + A+G +A G ++ ++
Sbjct: 324 NAVSSFFCRLHELNLDTRAIGRCRVCAVGPKTAAALAPHGIKADLIPENYKA--EGVVES 381
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
L K +++ L + Y + + L+
Sbjct: 382 FGKLDMQGKRVLFPKADRARDIIPVELERFGAEVVAPVAYCNVVPEELPASAMEALEKGQ 441
Query: 169 A--ILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
I F + S+V ++ ++ A + + V
Sbjct: 442 IDCITFTSSSTVQNLAAMVGENRLLKLLDGVAIASIGPITSKTCRELGLAVDIEPATYTL 501
Query: 222 TSLLKLLPLR 231
+L +
Sbjct: 502 DALTAAIVNH 511
>gi|91974949|ref|YP_567608.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
BisB5]
gi|91681405|gb|ABE37707.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
BisB5]
Length = 247
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 89/242 (36%), Gaps = 14/242 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP T ++ GY ++ P+ F + + +TS+ +L
Sbjct: 1 MAMLVTRPQPDNDATAAALRAKGYDVLLAPMLRFEPLPFPDDQDTITT--GVIVTSANAL 58
Query: 61 STLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ-KVLFTP 115
+ P+FA+G+ +A AR GF + ++ L + + +
Sbjct: 59 RAIEHQPGFARLLKLPLFAVGKHTARAARDAGFQDVVVADGDAARLRLKVSDSVRGKKKT 118
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFY 173
+ L+YL G + L E + + Y + ++ + +L Y
Sbjct: 119 EGTLLYLAGADLSRDLAGELREDGFNVVMQTTYRMAPVPTLPASVCDAFAAHRIEAVLHY 178
Query: 174 ARSSVLYFFSLPLPAKISAAFLCL-----SNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R S F + I + L + S ++ + + VTVA P E +L + L
Sbjct: 179 SRRSARAFIDATRESGIEISALAIPQCCLSETVSEVVREAGATQVTVARTPDEPALFEAL 238
Query: 229 PL 230
Sbjct: 239 DR 240
>gi|124514860|gb|EAY56371.1| Uroporphyrin-III C-methyltransferase / synthase [Leptospirillum
rubarum]
Length = 516
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 33/254 (12%), Positives = 77/254 (30%), Gaps = 26/254 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD------RESVFLAMQQSYGAIAIT 55
I++TR + +++++K+G V P L Y +
Sbjct: 263 RILLTREKESGSPLKDELEKLGAEVVSCPTIEIRPVTGMEREEVVRTLQNLSEYEWLLFL 322
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S + IF++G ++ + G ++ N
Sbjct: 323 SPNGVRYFFRAMRETGKDIRSLSGCRIFSMGPSTTRTLEEYGIHPDATPLESYANGVLEF 382
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
++ + + + + G + D L ++ I Y ++ I +++
Sbjct: 383 FRSQIPCSG-QRCLLIRGDRGDGAIPDGLAAMGFKIQQITAYENR-IPELPNYLRDLVSG 440
Query: 163 --LLQNADAILFYARSSVLYFFSLPLPAKISAAF---LCLSNNIASAIPASYKNVVTVAC 217
Q+ +FY+ S+ SL S L + A A+ + +
Sbjct: 441 GFENQDFHLAVFYSPSAYKNLVSLLKEHGQSIRKTTGLAIGPTTADALRKDGVTNILLPS 500
Query: 218 FPKETSLLKLLPLR 231
P + ++L +
Sbjct: 501 EPTDEAVLTTILQH 514
>gi|269215655|ref|ZP_06159509.1| siroheme synthase [Slackia exigua ATCC 700122]
gi|269131142|gb|EEZ62217.1| siroheme synthase [Slackia exigua ATCC 700122]
Length = 548
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 66/248 (26%), Gaps = 22/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR +A +++ +G V +P L + + TS+
Sbjct: 284 RILVTRSRTQASAFTRRLEALGAQVVEVPTIDIAPPESFDALDASLNALDGFSWVVFTSA 343
Query: 58 ESLSTLPANFCR------------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ R H I AIG A+A R G + A
Sbjct: 344 NGVEAFFERLRRRTALPHDARALAHARIAAIGPATADALRAHGIEADAVPHEYRAE-AVF 402
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPETTMKNLL 164
++ ++ + + L + V Y + + L
Sbjct: 403 DAMRERGLDADDAVLIPRAQVAREALPEMLAGIGCAVTVAPAYRTVVPGTSADAARAALA 462
Query: 165 QNADAILFYARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
DA+ F + S+ +L A + + + + A
Sbjct: 463 DGVDAVTFTSSSTAENLVALLGEDAPALLADARLFSIGPITTATLERLGFPPASTASSYT 522
Query: 221 ETSLLKLL 228
L+ L
Sbjct: 523 IPGLVDTL 530
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/161 (9%), Positives = 38/161 (23%), Gaps = 11/161 (6%)
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
+ L + + + + ++ + + F L
Sbjct: 248 RAEEAGFTAPVMTVVGQVACLREDLSWFEDAPLFGRRILVTRSRTQASAFTRRLEALGAQ 307
Query: 142 LRVIDCYYSQDIAYPE--TTMKNLLQNADAILFYARSSVLYFFSLPLP---------AKI 190
+ + + N L ++F + + V FF A
Sbjct: 308 VVEVPTIDIAPPESFDALDASLNALDGFSWVVFTSANGVEAFFERLRRRTALPHDARALA 367
Query: 191 SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
A + A A+ A V + ++ + R
Sbjct: 368 HARIAAIGPATADALRAHGIEADAVPHEYRAEAVFDAMRER 408
>gi|257465325|ref|ZP_05629696.1| uroporphyrinogen-III synthase [Actinobacillus minor 202]
gi|257450985|gb|EEV25028.1| uroporphyrinogen-III synthase [Actinobacillus minor 202]
Length = 250
Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 70/246 (28%), Gaps = 18/246 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M I++TRP ++ + +Q+ + PL RE L + S
Sbjct: 1 MNILVTRPDERGQELVDLLQQQQIFAIHQPLFTIESGRELPLLPSLFSQLNEGDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + Q N ++ +
Sbjct: 61 KNAVDFAHQTMTQTGFKFRSDLHYFSVGQRTATYFASKSEQAVKYPICFENSEGLLELPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L + F ++ ++ ++CY A E D
Sbjct: 121 MQNIQGKNIVILRAETGREFFAKEAVKRGASVQNVECYRRVPSAENLSEKLSLAKRVGID 180
Query: 169 AILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKET 222
I+ + + +S + + + IA+ S + + V+
Sbjct: 181 TIIVTSSEILASLIENTVDEDKDWLLSCKLIVIGHRIATIAKQSGWGSDKIVVSPKADNQ 240
Query: 223 SLLKLL 228
++L +L
Sbjct: 241 TILAVL 246
>gi|86608058|ref|YP_476820.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556600|gb|ABD01557.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 500
Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 69/246 (28%), Gaps = 20/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSE 58
+++TR ++ +E +Q G + MP +A + + +TS+
Sbjct: 247 VLVTRSEGQSPAFRELLQAQGARVLEMPTLVIQPPTCWDPLDAAIARLGQFNWLLLTSAN 306
Query: 59 SLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ R P+ S + + ++
Sbjct: 307 GVQAFFERLHRQGRDSRALHPVQVAVVGSKTASVLAQYGIHPDLMPQEFVAEALLQVWPE 366
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--A 169
+ Q+ L L + + + Y S A + + L+
Sbjct: 367 PISGQRILFPRVESGGREEVVQGLRQRGAEVVEVAAYQSACPAAADPQVLEALKAHQVDI 426
Query: 170 ILFYARSSVLYFFSLPLPAKIS-------AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ F + +V +F L A + + A+ A++ V A
Sbjct: 427 LTFASSKTVQHFAHLIRQAGLGPEIWDPPVQIAAIGPKTAATCKAAFGRVDIAAQEYTLE 486
Query: 223 SLLKLL 228
L++ L
Sbjct: 487 GLVEAL 492
>gi|15615607|ref|NP_243911.1| uroporphyrinogen-III synthase [Bacillus halodurans C-125]
gi|10175667|dbj|BAB06764.1| uroporphyrinogen III cosynthase [Bacillus halodurans C-125]
Length = 253
Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 83/235 (35%), Gaps = 9/235 (3%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAITSSESL 60
++ITR ++A I++ G +P+ +PL FI + A QSY I TS+ ++
Sbjct: 11 VLITRAKEQASSLSRLIEEAGGVPIEVPLLSFIKTMDVYEEVGASIQSYEWIVFTSANAV 70
Query: 61 STLPANFCRH--TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ R + +I + R+ I + +A+ +VE V
Sbjct: 71 RFFFNTWPRQELKKLPSIAAVGSSTQRELSRYGISVDLMPNEYVAESLVETMVKRLKPCR 130
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARS 176
+++ G + L + + + Y ++ + + Q I F + S
Sbjct: 131 VLFPKGNLARPTVKVGLETNGFIVDEMTVYETKRPLEAKVMLCEAFQKHRIEIITFTSPS 190
Query: 177 SVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+V +F +L + + A+ V VA L+ +
Sbjct: 191 AVDHFVTLLDREFILHEHLLYAYIGPIAAARAKQRGLPVHIVAKTYTGEGLVNAI 245
>gi|260914568|ref|ZP_05921036.1| uroporphyrinogen-III synthase [Pasteurella dagmatis ATCC 43325]
gi|260631359|gb|EEX49542.1| uroporphyrinogen-III synthase [Pasteurella dagmatis ATCC 43325]
Length = 248
Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 77/244 (31%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M ++ITRP ++ + E + + G + +PL RE L+ + + S
Sbjct: 1 MAVLITRPDERGKQLVEMLIQSGVFAIHLPLFTIESGRELNDLPNKLSQLKVGDYVFAVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQK------GFTQIFHGKDNSINLAKIIVEQK 110
+++ + + ++ + + ++
Sbjct: 61 PHAVTFAVQTLRHTGFSWRQDLNYFAVGQRSAESFTAQIERPVFYPNQQETSEGLLNLPV 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K ++ L G F + + +++CY I Y ++ + A
Sbjct: 121 MQQLADKTILILRGNGGREFFAEQAELRGAKVEIVECYQRIPIDYNNAEQISICKRAGIN 180
Query: 170 -ILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + Y + + +S IA+ A + ++ SL
Sbjct: 181 RIVVTSAEILQYLMDFVPENEHNWLKNCQLITISRRIANLAMAQGWTNIVISPKADNHSL 240
Query: 225 LKLL 228
L+ L
Sbjct: 241 LQTL 244
>gi|251793295|ref|YP_003008023.1| uroporphyrinogen-III synthase [Aggregatibacter aphrophilus NJ8700]
gi|247534690|gb|ACS97936.1| uroporphyrinogen-III synthase [Aggregatibacter aphrophilus NJ8700]
Length = 248
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 72/244 (29%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M +++TRP ++ + + + K G + + +PL E A + + S
Sbjct: 1 MAVLVTRPDERGQQLVDMLAKAGVVAIHLPLFNIEAGAELNGLPNKFAQLKVGDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + T H N ++
Sbjct: 61 KSAVDFADKALKNTGFVWRDDLQYFTVGQGTAQHFAMITTLAVHYPTTQENSEGVLQLAA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L G + + + +++CY + I Y E T
Sbjct: 121 MQNLQGKTILILRGNGGRELLSEQAQQRGANVEIVECYRRESIVYNSTEQTSLCKRAGVQ 180
Query: 169 AILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + + + + +S I+ A V V+ +L
Sbjct: 181 TIVATSAEILTQLVDFVPQNEHNWLKSCQLITVSERISHLAQALGWQNVIVSPRADNQTL 240
Query: 225 LKLL 228
L+ L
Sbjct: 241 LQTL 244
>gi|254444388|ref|ZP_05057864.1| uroporphyrin-III C-methyltransferase domain protein
[Verrucomicrobiae bacterium DG1235]
gi|198258696|gb|EDY83004.1| uroporphyrin-III C-methyltransferase domain protein
[Verrucomicrobiae bacterium DG1235]
Length = 507
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/251 (17%), Positives = 88/251 (35%), Gaps = 23/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+V+TR +A ++K+G + +PL + + A SY + +S
Sbjct: 256 KLVVTRSQGQASELSSMLEKLGAEVIGLPLITISGNVDKQTAADVFGEIASYDWLVFSSP 315
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQI-FHGKDNSINLAKIIV 107
+ F I A+G+++A ++ T + N+ +LA+ +V
Sbjct: 316 NGVRYFFEAFFEKFEDIRSLGFLRIAAVGKSTAKEIKKFYVTTDLVPPEANAESLAEALV 375
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
L + ++ + G D L E + + + Y ++ E + +
Sbjct: 376 ATDSLDS--AKVLVVAGNLGRDVLIDKLEEARAIVDRFEVYKTEQTDLSENPAAKMFREQ 433
Query: 168 DA--ILFYARSSVLYFFSLPLPAKISA-----AFLCLSNNIASAIPASYKNVVTVACFPK 220
A ILF + S V F ++SA + + ++ + V A
Sbjct: 434 GADGILFTSSSGVRSFVDQAKHLQLSASALRPKTISIGPITSATMKQIGLPVDLEAKEAS 493
Query: 221 ETSLLKLLPLR 231
SL+ + R
Sbjct: 494 LDSLVDSVVRR 504
>gi|194334347|ref|YP_002016207.1| Uroporphyrinogen-III synthase [Prosthecochloris aestuarii DSM 271]
gi|194312165|gb|ACF46560.1| Uroporphyrinogen-III synthase [Prosthecochloris aestuarii DSM 271]
Length = 249
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 65/243 (26%), Gaps = 15/243 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP +A +++QK G V+ P + ++ TS S
Sbjct: 2 MKSVLVTRPKHQAASFVQELQKYGLNSVVFPTIEIRPASDWNI-PDISTFSGAFFTSPNS 60
Query: 60 LSTLPANFCRHTP--------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + P I + + ++
Sbjct: 61 VRYFMERLTQEAPHELVHLKAIKVYAVGKTTARDLAAYGITTEPVPKVADAVNLMQTISP 120
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE-TTMKNLLQNADA- 169
K ++L G + E + Y + ++ ++ +
Sbjct: 121 EEINGKSFLFLKGNLSLGTIPAVISERGGSCSAVTVYENHPPDLNATEEVRQQIERGEIS 180
Query: 170 -ILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
I F + S+ FF + + A+A+ N + + +
Sbjct: 181 CITFTSPSTAQNFFQAMGTTVLPEGILVAAIGQTTANALEKLGVNTDIIPRYYDAPHFAE 240
Query: 227 LLP 229
+
Sbjct: 241 AIA 243
>gi|289193077|ref|YP_003459018.1| Uroporphyrinogen III synthase HEM4 [Methanocaldococcus sp.
FS406-22]
gi|288939527|gb|ADC70282.1| Uroporphyrinogen III synthase HEM4 [Methanocaldococcus sp.
FS406-22]
Length = 244
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 79/246 (32%), Gaps = 22/246 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +VITRP +++ ++K G+ P++ P +++++ +Y IA TS +
Sbjct: 1 MKVVITRPKERSDIFANLLKKEGFEPIIFPTLEIVYNKD--LKVDLDNYNWIAFTSPSGV 58
Query: 61 STLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
L H + A +K F + ++ E K +
Sbjct: 59 IGLHNILTEHEKEEIKNKKIAVIGEKTAETFRKYFGRDPDIIPKEYTAESLLEEIKKVIK 118
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAI 170
+ ++++ + ++ Y S + + +K L ++ +
Sbjct: 119 NGDRFLIPTTPSTRD-----VLKNNLNADLLFVYKSVEPENLKKDIKKLKELIAKDKFIL 173
Query: 171 LFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + + FF + + + A I + +L+
Sbjct: 174 TFTSGLTAKNFFKYVDDEFSNIIKDNYIVAIGPITAKVIEKFGFKP-LIPKVYTIEGILE 232
Query: 227 LLPLRR 232
++ +
Sbjct: 233 VIKKLK 238
>gi|218781845|ref|YP_002433163.1| uroporphyrin-III C-methyltransferase [Desulfatibacillum
alkenivorans AK-01]
gi|218763229|gb|ACL05695.1| uroporphyrin-III C-methyltransferase [Desulfatibacillum
alkenivorans AK-01]
Length = 505
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 69/248 (27%), Gaps = 23/248 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
I++TR K+A EK+ +G V P + ++ L +Y + +TS
Sbjct: 254 KILVTRSRKQASALVEKLADLGADCVETPTIELVPPKDPKPLEDAVDNIAAYDWVVLTSV 313
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + AIG A++ R+ G K +
Sbjct: 314 NGVDYFFDCLFSKGKDARALANAKVAAIGPATSAKLREYGLVTDIVPKTYRAESV--VEA 371
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---Q 165
K ++ L + + + Y + + + +
Sbjct: 372 FLQEDMKDKKVLLPRAAQARPILPVELKKMGALVDEVPAYETVQASQDQAQVLWERLESG 431
Query: 166 NADAILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPK 220
F + S+V F +L K+ + + V A
Sbjct: 432 EITMTTFTSSSTVSNFVALFDKEKLLKVMEGVKTASIGPITSDTARDLGLKVDMEAEAYT 491
Query: 221 ETSLLKLL 228
L++ +
Sbjct: 492 IDGLVQAI 499
>gi|148655886|ref|YP_001276091.1| uroporphyrinogen III synthase HEM4 [Roseiflexus sp. RS-1]
gi|148567996|gb|ABQ90141.1| uroporphyrinogen-III synthase [Roseiflexus sp. RS-1]
Length = 260
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 61/242 (25%), Gaps = 15/242 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
I +TR ++A ++ G + P + + L Y I TS+
Sbjct: 11 RIAVTRAAERAEGLASALRAEGAEVSICPTIAYAPPEDPAPLEAALRRLDRYDWIVFTSA 70
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
++ L P A + + + K
Sbjct: 71 AAVDALAEQGALPPPAHVRVAAVGKATAASIEARGGRVDLIPAEQNAEGLLAALHDVAGK 130
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM-KNLLQNADAILFYARS 176
+ L ++ Y + + + DAILF + S
Sbjct: 131 RFLLPVADIARDALAAGLRARGAVADMVIAYRTVPGPGARELITLLCGRALDAILFSSPS 190
Query: 177 SVLYFFSLPLPAKIS----------AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
++ Y I A + + A A+ V A P +L+
Sbjct: 191 TLRYLLDGMEQFGIDRSVARALLTGVALIAIGPTTARALRDEGLPVAAQAPTPDTGGVLQ 250
Query: 227 LL 228
L
Sbjct: 251 AL 252
>gi|225159194|ref|ZP_03725497.1| uroporphyrin-III C-methyltransferase [Opitutaceae bacterium TAV2]
gi|224802196|gb|EEG20465.1| uroporphyrin-III C-methyltransferase [Opitutaceae bacterium TAV2]
Length = 522
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 23/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
+ ITR + +EK++ +G + +PL D + L SY I TS+
Sbjct: 271 RVAITRTRDQNSELREKLESLGAEVIELPLITISKDVDKHGLVEILTELGSYDWIVFTSA 330
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHG-KDNSINLAKIIV 107
+ F + +G A+A + +LA ++
Sbjct: 331 NGVRFFFEEFFKGFDDVRALGLLRFACVGRATAREIEKHHIKVECMPASATGESLADALI 390
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
E L + +I + G L + + Y ++ + + +
Sbjct: 391 ETDSLDS--AKVIVVTGNLNRDILVKKLEAANAIVDRLLLYKTERTDLTNDPVADDFRQR 448
Query: 168 --DAILFYARSSVLYFFSLPLPAKI----SAAFL-CLSNNIASAIPASYKNVVTVACFPK 220
DAILF + S+V F ++ + ++ + S V A P
Sbjct: 449 GADAILFASSSAVQSFAKHAAALQLAPTARHPLAGSIGALTSATMRESGMAVDFEAGKPS 508
Query: 221 ETSLLKLLPLR 231
SL+ + R
Sbjct: 509 LDSLIAAMQKR 519
>gi|298507315|gb|ADI86038.1| uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen
III synthase [Geobacter sulfurreducens KN400]
Length = 515
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 25/249 (10%), Positives = 58/249 (23%), Gaps = 22/249 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I++TR +A ++ +G + P + L ++ TS
Sbjct: 264 IMVTRAADQAGEFSVMLRSLGARVLECPTIAIVPPESWDDLDSAISRIDTFDWAIFTSFN 323
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ I +G +A G D +I
Sbjct: 324 AVRFFFQRLDAAGRDSRALGACRICVVGPKTAEALAPYGIRPDLVAADY--KGEGVIEAL 381
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + K +++ G L + Y + L++
Sbjct: 382 RDVPLAGKRVLFPKGDRARDVIPTGLAAFGAHVEAPVAYRNAAPDALPAGTIEELEDRRI 441
Query: 170 IL--FYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
F + S+V ++ + + + V
Sbjct: 442 HCVTFTSSSTVQNLAAILGENRMLHLLEGVIIASIGPITSRSCRELGLQVHIEPQEYTLA 501
Query: 223 SLLKLLPLR 231
+L +
Sbjct: 502 ALTAEMVRH 510
>gi|255020136|ref|ZP_05292206.1| Uroporphyrinogen-III synthase [Acidithiobacillus caldus ATCC 51756]
gi|254970429|gb|EET27921.1| Uroporphyrinogen-III synthase [Acidithiobacillus caldus ATCC 51756]
Length = 262
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 72/244 (29%), Gaps = 19/244 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
IV+TRP +++ ++ G +P+ P L + +S
Sbjct: 10 IVVTRPKEQSGELIALLEAAGALPIPFPAIRIEAPENWQSLDAALTDLARFQWAIFSSRN 69
Query: 59 SL-------STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ L + T I A+G +A + G + S ++ +
Sbjct: 70 AVQFALSRLQALARQWPASTRIAAVGRETARALKDFGLGVDLVPERFSS--EGLLEHPAL 127
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DA 169
L + + G E L E + + CY T + + A
Sbjct: 128 LEVRGERIALFAGDQGRELLERTLGERGALVEKVYCYRRSVPGANPTPLLHAWARGELQA 187
Query: 170 ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ + F+ + + + +S A AI A VA LL
Sbjct: 188 VTVTSPEIFNNFYQMVGGLGQRWLKTTPIVAISPLTAEAITAKGLPAPWVAPEASNQGLL 247
Query: 226 KLLP 229
+ L
Sbjct: 248 QALQ 251
>gi|89093769|ref|ZP_01166715.1| uroporphyrinogen-III synthetase [Oceanospirillum sp. MED92]
gi|89081899|gb|EAR61125.1| uroporphyrinogen-III synthetase [Oceanospirillum sp. MED92]
Length = 260
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 75/250 (30%), Gaps = 23/250 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--------SVFLAMQQSYGAIA 53
+++TRP +A E + + G PV PL + + I
Sbjct: 9 RVLVTRPAHQADTLYELLLQQGADPVRFPLLQITPVTSADSGFHLLKQQIIDLDLFQHII 68
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASAC-----LARQKGFTQIFHGKDNSINLAKIIVE 108
S ++ ++ P +G AR + + + ++
Sbjct: 69 FISPNAVELGYEWIDQYWPQLPLGVQWLAIGKQSAARLNNYGIDAYHSPLGYDSEALLNS 128
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ ++ + G+ + L + + Y + Y + + L +
Sbjct: 129 PALQKIAGDKVLIMRGEGGRETLAEELRARGAEVSYAELYRRESPCYSAKEISDALLSKH 188
Query: 169 --AILFYARSSVLYFF--------SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
AIL + + + L + ++ + S+ I N +T A
Sbjct: 189 LDAILISSGAGLKNLITLLSSTGKELSTDSLLNCHLIVPSDRIKQEAQGVGFNRITTASG 248
Query: 219 PKETSLLKLL 228
P + S++ L
Sbjct: 249 PDDRSMIAAL 258
>gi|292493893|ref|YP_003529332.1| uroporphyrinogen III synthase HEM4 [Nitrosococcus halophilus Nc4]
gi|291582488|gb|ADE16945.1| Uroporphyrinogen III synthase HEM4 [Nitrosococcus halophilus Nc4]
Length = 265
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 68/245 (27%), Gaps = 16/245 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYF----IHDRESVFLAMQQSYGAIAITSSE 58
I++TRP ++A + I+ G + P + + + S
Sbjct: 17 ILVTRPAEQAEGLSQLIEAEGGQVLRFPAVEIGDPKEPFAVEEVIRRLEGFHWAVFVSVN 76
Query: 59 SL-----STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
++ L A+ + A + N ++ ++
Sbjct: 77 AVKRGLSWVLSRREVPADLKIAVVGQATAQALAAFGLHPHLCPTSGYNSEALLAMDELQH 136
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ-DIAYPETTMKNLLQNAD--AI 170
K ++ G L + + + Y ++ L + +
Sbjct: 137 MKGKRVVIFRGSGGRELLAGTLAKRGAQIEYAEVYRRSLPPPSVAANLRQALAHRPLDVV 196
Query: 171 LFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ +++ + L + + + + A + VA P +T+L++
Sbjct: 197 ITTSKAVLENLCYLVGEPLLEKLRLTPLVVIGSRQAQQAKELGFTQIWVAQEPSDTALVQ 256
Query: 227 LLPLR 231
+
Sbjct: 257 AIIEH 261
>gi|77359076|ref|YP_338651.1| uroporphyrinogen-III synthase [Pseudoalteromonas haloplanktis
TAC125]
gi|76873987|emb|CAI85208.1| uroporphyrinogen-III synthase HemD (N terminal)/Uroporphyrin-III
C-methyltransferase (C terminal) [Pseudoalteromonas
haloplanktis TAC125]
Length = 616
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 27/237 (11%), Positives = 69/237 (29%), Gaps = 10/237 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD-RESVFLAMQQSYGAIAITSSESL 60
I+ITRP K +++++ GY + P+ + +S+ L+ + I S +++
Sbjct: 3 NILITRPQGKGAALAQQLEQAGYQASLFPVLKIEYLTPDSIELSPLTNADKIIFVSQDAV 62
Query: 61 STLPANFCR-HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
L + G + + ++ + + +
Sbjct: 63 LALSELKPDINIKAQFYGVGQQTADTIYEVFGVRAAVPKQHDSEGLLALKSLADVDSCNI 122
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LFYARSS 177
+ + G L + L Y I + Q+ + + + ++
Sbjct: 123 VLVKGIGGRPDIAKTLKQRGAFLNNCVVYQRTPIDPEPNNWIDHWQSQNVHGIVITSNAA 182
Query: 178 VLYFFSLP----LPAKISAAFLCLSNNIASAIPAS--YKNVVTVACFPKETSLLKLL 228
V F F S I + + + +A + ++ +
Sbjct: 183 VDAIFKNLAAPQRQWLQQCRFYVASERIGAYLQQHQVSSANIHIAAGASDNAMFTCI 239
>gi|297581839|ref|ZP_06943760.1| uroporphyrinogen-III synthase [Vibrio cholerae RC385]
gi|297533933|gb|EFH72773.1| uroporphyrinogen-III synthase [Vibrio cholerae RC385]
Length = 260
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 68/240 (28%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ +++ + G + PL + LA S+ I S +
Sbjct: 6 MTVLVTRPDEQGAELCQRLHQQGISALHHPLLAITASPQLAALAEDLSSFDIIIAVSQHA 65
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 66 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 125
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 126 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFAAAECVQKWQLAKVDSLVI 185
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F P L S IA+ + + V L+ L
Sbjct: 186 TSSEQLAFFIRQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 245
>gi|317152461|ref|YP_004120509.1| uroporphyrin-III C-methyltransferase [Desulfovibrio aespoeensis
Aspo-2]
gi|316942712|gb|ADU61763.1| uroporphyrin-III C-methyltransferase [Desulfovibrio aespoeensis
Aspo-2]
Length = 506
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 62/238 (26%), Gaps = 17/238 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR ++A + ++ G P + + Y + TS
Sbjct: 255 VVVTRAREQASGLVDILRGHGACVHEFPTIAVEPLDDYAEVETAILQLARYQWVVFTSVN 314
Query: 59 SLSTLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ I A + I +A+ +VE +
Sbjct: 315 GVKFFWEQLGAIGLDSRIFGGMQIAAIGPATADELKARGIIPDFVPDKYVAEHVVEGLLA 374
Query: 113 FTPQKP-LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA-- 169
Q ++ K + L + + V+ Y ++ + + L N D
Sbjct: 375 LGIQGQDVLIPRAKVAREVLPEELKKAGCNVTVLPVYETRLVQQSGDEIVAALDNGDIRY 434
Query: 170 ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + S+V FF L + + + +
Sbjct: 435 VTFTSSSTVENFFELIPADTLRRYPDVRLASIGPVTTATLSRFGFTPAIEPEDYTIPG 492
>gi|310826391|ref|YP_003958748.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium
limosum KIST612]
gi|308738125|gb|ADO35785.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium
limosum KIST612]
Length = 804
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 70/245 (28%), Gaps = 19/245 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-----MQQSYGAIAITS 56
IV+TR +++ + +I ++G + P E+V Y I TS
Sbjct: 556 NIVVTRSREQSSKMVAQIAELGGNAIEYPTIKIEPIPENVDALAENFGSLDRYSHIIFTS 615
Query: 57 SESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + I SA A +++
Sbjct: 616 TNGVEIFFDALKASGRDTRALGSIHVTAIGSATAALLAEQGITADFVPKKYVGEELVDGL 675
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
L T ++ K + + P+ Y + + + +L+N +
Sbjct: 676 MPLLTETSRVLIPRSKNAR-IYVVEELRKVCPVDEYQIYETVREDNTDVDVAEMLKNKEI 734
Query: 170 --ILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + ++V YF +A + + + + V A
Sbjct: 735 DYITFTSSTTVQYFVEKIGSENVDDTKNAKCVSIGPVTSDKMKELGLTVDVQAEVYTIAG 794
Query: 224 LLKLL 228
+++ +
Sbjct: 795 MIEAI 799
>gi|253699059|ref|YP_003020248.1| uroporphyrin-III C-methyltransferase [Geobacter sp. M21]
gi|251773909|gb|ACT16490.1| uroporphyrin-III C-methyltransferase [Geobacter sp. M21]
Length = 511
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 62/244 (25%), Gaps = 22/244 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
+++TR +A K++++G P + L S+ I TS
Sbjct: 257 VLVTRGADQAGEFTTKLEQLGARAYCCPTIEITPPADHKALDEAIEGLDSFHWIIFTSYN 316
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ A H + A+G +A G D + +
Sbjct: 317 AVKYFFARLSEHNLDTRALGRCRVCAVGPKTAAALAHYGVRADLIPSDYKAEGVVELFSE 376
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--A 167
+ +++ G + L + Y + L++
Sbjct: 377 MDMAGQW--VLFPKGDRAREVITEELGRLGAQVIAPVAYANHTPDDIPAEALAALEDGRV 434
Query: 168 DAILFYARSSVLYFFSLPLPAK-----ISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D F + S+V ++ + + + V
Sbjct: 435 DCATFTSSSTVQNLAAILGENRFLHLMQGVKVASIGPITSKTCRDLGLEVHMEPAEYTLD 494
Query: 223 SLLK 226
+L
Sbjct: 495 ALAA 498
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/155 (11%), Positives = 41/155 (26%), Gaps = 8/155 (5%)
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
+ +NL + + ++ G + F L +
Sbjct: 219 EKARAAEFKAPAITVVGEVVNLRDTLRWFDNRPLFGRSVLVTRGADQAGEFTTKLEQLGA 278
Query: 141 PLRVIDCYYSQDIAYPE--TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL--- 195
A + L + I+F + ++V YFF+ + L
Sbjct: 279 RAYCCPTIEITPPADHKALDEAIEGLDSFHWIIFTSYNAVKYFFARLSEHNLDTRALGRC 338
Query: 196 ---CLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ A+A+ + K +++L
Sbjct: 339 RVCAVGPKTAAALAHYGVRADLIPSDYKAEGVVEL 373
>gi|77920652|ref|YP_358467.1| uroporphyrinogen-III methylase [Pelobacter carbinolicus DSM 2380]
gi|77546735|gb|ABA90297.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Pelobacter carbinolicus DSM 2380]
Length = 513
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 69/246 (28%), Gaps = 20/246 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR +A E +Q G + P + + L + +TS
Sbjct: 262 RILVTRAAGQAGVLTEGLQAAGAEAICCPTLEIVPPPDWQELDAALQQLPGTDVLVLTSV 321
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+++ I A+G +A RQ G + ++
Sbjct: 322 NAVNYFFERLFALGHDSRLLHDVCIAAVGPKTAAALRQYGLRADLLP--DEQRAEGVLEV 379
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-A 167
K ++Y + L + Y+++ ++ L+
Sbjct: 380 LLDRGVTGKRILYPRSQRARDLLVTELSAAGAEVCAPVAYHTRAAVGAAEQLREALEQGV 439
Query: 168 DAILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
DA+ F + S+V + L + + V A P
Sbjct: 440 DAVTFASSSAVDHCLQALGDDGQRLLAGVTIASLGPLTSDTVRRHGLEVAVEAAVPTVEM 499
Query: 224 LLKLLP 229
L++ L
Sbjct: 500 LIEALQ 505
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/185 (8%), Positives = 50/185 (27%), Gaps = 8/185 (4%)
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ ++ + T + + + + + + + + L K +
Sbjct: 199 DTPVAVVRWGTTPRQQTLVGTLADITERVQQARLGPPAIIVVGEIVALRKQLRWFDNRPL 258
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET--TMKNLLQNADAILF 172
+ ++ + + L + L D ++
Sbjct: 259 FGRRILVTRAAGQAGVLTEGLQAAGAEAICCPTLEIVPPPDWQELDAALQQLPGTDVLVL 318
Query: 173 YARSSVLYFFSLPLPAKISAAF---LCL---SNNIASAIPASYKNVVTVACFPKETSLLK 226
+ ++V YFF + +C+ A+A+ + + +L+
Sbjct: 319 TSVNAVNYFFERLFALGHDSRLLHDVCIAAVGPKTAAALRQYGLRADLLPDEQRAEGVLE 378
Query: 227 LLPLR 231
+L R
Sbjct: 379 VLLDR 383
>gi|27364542|ref|NP_760070.1| uroporphyrinogen-III synthase [Vibrio vulnificus CMCP6]
gi|27360661|gb|AAO09597.1| Uroporphyrinogen-III synthase [Vibrio vulnificus CMCP6]
Length = 243
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 62/241 (25%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSES 59
M +++TRP ++ + +Q+ G + PL + + + + I S +
Sbjct: 1 MAVLVTRPAEQGQALCQLLQQAGVPALQHPLIDIVANSSLNTLANDLKQSDVIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + T + ++
Sbjct: 61 VQCAEHILKAQQQNWPQNALYLAVGQKTAHYLSKVTHQDVNYPTVSDSEHLLQLPVFNRI 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILF 172
K ++ L G L + +R + Y + I + + Q D ++
Sbjct: 121 AGKRVLILRGNGGRELIHQALSQRGADVRYCETYQRELIPFDAVSSLTLWRDQGVDTLIV 180
Query: 173 YARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y + L S IA+ V LL L
Sbjct: 181 TSAEQLDYLHAQMSDEGKFWLYQQRLLVPSERIAAIATQLGFTQVCNVGSASNKDLLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|308070413|ref|YP_003872018.1| Porphyrin biosynthesis protein HEMD [Paenibacillus polymyxa E681]
gi|305859692|gb|ADM71480.1| Porphyrin biosynthesis protein HEMD [Paenibacillus polymyxa E681]
Length = 518
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/252 (12%), Positives = 67/252 (26%), Gaps = 25/252 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-------SVFLAMQQSYGAIAI 54
I++TR +A +I+++G P P+ + + A Y +
Sbjct: 255 RILVTRARAQASSLVHRIEELGGEPYEFPVIQTVAPSDEPTKQEIKEAFARLPEYDWVFF 314
Query: 55 TSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS + + A A + + + ++
Sbjct: 315 TSVNGVEYFFTHLKEQGKDVRMLFKARIAAVGPATAAALRTHGIVAEQIEGPFQAEGLLE 374
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ---DIAYPETTMKNLL 164
+ + + G + L E + + D Y + + E
Sbjct: 375 GFEQDLQAGQNVFLPRGDLARPWLPEKLREMGLHVTEADLYQTVLAANTQDDELLKLLEE 434
Query: 165 QNADAILFYARSSVLYFFSLPLPAKIS--------AAFLCLSNNIASAIPASYKNVVTVA 216
+ AI F + S+V +F I + + V ++
Sbjct: 435 RAIHAITFTSSSTVTFFLEALRQMGIHDPLSLLEGVTIAVIGPLTGETATQAGLTVSFMS 494
Query: 217 CFPKETSLLKLL 228
SL++ L
Sbjct: 495 EKATIESLIQSL 506
>gi|330827977|ref|YP_004390929.1| Uroporphyrinogen-III synthase [Aeromonas veronii B565]
gi|328803113|gb|AEB48312.1| Uroporphyrinogen-III synthase [Aeromonas veronii B565]
Length = 244
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 73/242 (30%), Gaps = 10/242 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSES 59
M ++ RP +A + +++ G+ P+ PL + E + + +S A+ S +
Sbjct: 1 MTPLVVRPAAQATELVQLLRRHGHAPLCCPLLETVAGSELPLLPDLLRSADAVIAVSIHA 60
Query: 60 LSTLPANFCRHTPIFAIGEASA---CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + E A A I + ++ +
Sbjct: 61 VHFAHDFLLQTGQTWPHIEYFAVGQASADAFAAIGITASCPDDPRSEGLLALPALQQVAG 120
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYA 174
K ++ L G L + Y T+ Q D++L +
Sbjct: 121 KRVLILRGNGGRDLIASTLASRGALVHYCAAYERHYPELDGDTLTRHWQAAGLDSLLITS 180
Query: 175 RSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ L P + S +A A+ +T+A +L L L
Sbjct: 181 GELLQRLLELVPTSQQPWLFDRLLVVPSPRVAEMASAAGFIHITIAQGASNQALTAALEL 240
Query: 231 RR 232
R+
Sbjct: 241 RK 242
>gi|262189995|ref|ZP_06048300.1| uroporphyrinogen-III synthase [Vibrio cholerae CT 5369-93]
gi|262034118|gb|EEY52553.1| uroporphyrinogen-III synthase [Vibrio cholerae CT 5369-93]
Length = 255
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 68/240 (28%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 1 MTVLVTRPDEQGAELCQLLHQQGIPALHHPLIAISASPQLAALAEDLSSFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 61 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 121 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFAAAECVQKWQLAKVDSLVI 180
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F S P L S IA+ + + V L+ L
Sbjct: 181 TSSEQLAFFISQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 240
>gi|138896210|ref|YP_001126663.1| uroporphyrinogen III cosynthase [Geobacillus thermodenitrificans
NG80-2]
gi|196250166|ref|ZP_03148860.1| Uroporphyrinogen-III synthase [Geobacillus sp. G11MC16]
gi|134267723|gb|ABO67918.1| Uroporphyrinogen III cosynthase [Geobacillus thermodenitrificans
NG80-2]
gi|196210350|gb|EDY05115.1| Uroporphyrinogen-III synthase [Geobacillus sp. G11MC16]
Length = 256
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/238 (13%), Positives = 71/238 (29%), Gaps = 11/238 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
+++TR ++A K++ G +P+ +PL +A + Y + +TS+
Sbjct: 11 VLVTRDKEQAASFSAKLRDAGAVPIEIPLIAIRPAATPEAIAALAERLEEYRWLVLTSAN 70
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ-KVLFTPQK 117
++ + P+ I A + A+ + +
Sbjct: 71 AIRFFFPHVSLSRPLPNIAVVGRKTAAALAEYGVSPVLVPDDFTAERLAAMLAPRLKQGE 130
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYAR 175
++++ G + + L E + Y + E + LL+ D + +
Sbjct: 131 RVLFVKGDLASPTLPEALREAGATVDEFIVYRTMPDTSGEEQLLTLLRERKLDVLTLMSP 190
Query: 176 SSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S+V L C+ A V ++K +
Sbjct: 191 SAVRSLARLLGGEANELLSGVTVACIGPVTKKAAEQEGIAVHICPADYTADGIMKAME 248
>gi|39998375|ref|NP_954326.1| uroporphyrinogen III synthase/methyltransferase [Geobacter
sulfurreducens PCA]
gi|39985321|gb|AAR36676.1| uroporphyrinogen III synthase/methyltransferase [Geobacter
sulfurreducens PCA]
Length = 515
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 25/249 (10%), Positives = 57/249 (22%), Gaps = 22/249 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I++TR +A ++ +G + P L ++ TS
Sbjct: 264 IMVTRAADQAGEFSVMLRSLGARVLECPTIAIAPPESWDDLDSAISRIDTFDWAIFTSFN 323
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ I +G +A G D +I
Sbjct: 324 AVRFFFQRLDAAGRDSRALGACRICVVGPKTAEALAPYGIRPDLVAADY--KGEGVIEAL 381
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + K +++ G L + Y + L++
Sbjct: 382 RDVPLAGKRVLFPKGDRARDVIPTGLAAFGAHVEAPVAYRNAAPDALPAGTIEELEDRRI 441
Query: 170 IL--FYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
F + S+V ++ + + + V
Sbjct: 442 HCVTFTSSSTVQNLAAILGENRMLHLLEGVIIASIGPITSRSCRELGLQVHIEPQEYTLA 501
Query: 223 SLLKLLPLR 231
+L +
Sbjct: 502 ALTAEMVRH 510
>gi|153803405|ref|ZP_01957991.1| uroporphyrinogen-III synthase [Vibrio cholerae MZO-3]
gi|124121062|gb|EAY39805.1| uroporphyrinogen-III synthase [Vibrio cholerae MZO-3]
Length = 260
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 6 MTVLVTRPDEQGAELCQLLHQQGIPALHHPLIAISASPQLAALAEDLSSFDIIIAVSQHA 65
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 66 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 125
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 126 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFTAAECVQKWQLAKVDSLVI 185
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F P L S IA+ + + V L+ L
Sbjct: 186 TSSEQLAFFIRQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 245
>gi|310643594|ref|YP_003948352.1| uroporphyrin-iii c-methyltransferase [Paenibacillus polymyxa SC2]
gi|309248544|gb|ADO58111.1| Uroporphyrin-III C-methyltransferase [Paenibacillus polymyxa SC2]
Length = 518
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 67/252 (26%), Gaps = 25/252 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-------SVFLAMQQSYGAIAI 54
I++TR +A +I+++G P P+ + + A Y +
Sbjct: 255 RILVTRARAQASSLVHRIEELGGEPYEFPVIQTVVPSDEQAKQKIKEAFARLPEYDWVFF 314
Query: 55 TSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS + + A + + + ++
Sbjct: 315 TSVNGVEYFFTHLKEQGKDVRALYKARIAAVGPATADALRAHGIVAEQIEGPFQAEGLLE 374
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ---DIAYPETTMKNLL 164
+ + + G D L E + + D Y + + E
Sbjct: 375 AFEQDLQAGQNVFLPRGDLARSWLPDQLREMGLRVTEADLYQTVLAANTQDDELLKLLEE 434
Query: 165 QNADAILFYARSSVLYFFSLPLPAKIS--------AAFLCLSNNIASAIPASYKNVVTVA 216
+ AI F + S+V +F IS + + V ++
Sbjct: 435 RAIHAITFTSSSTVTFFLEALRQMGISDPVSLLEGVTIAVIGPLTGETATQAGLTVSLMS 494
Query: 217 CFPKETSLLKLL 228
SL++ L
Sbjct: 495 EKATIESLIQSL 506
>gi|82703802|ref|YP_413368.1| uroporphyrinogen-III synthase [Nitrosospira multiformis ATCC 25196]
gi|82411867|gb|ABB75976.1| uroporphyrinogen-III synthase [Nitrosospira multiformis ATCC 25196]
Length = 260
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 71/245 (28%), Gaps = 18/245 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+I++TRP +A KI+ G P + P+ + L + S
Sbjct: 9 HILVTRPSHQAGGLAGKIRAAGGEPCLFPVLEIQDISDPRPLLELIERLDEFYLAIFVSP 68
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI-IVEQK 110
+++ + C I +G+ +A R+ G + + + A + + E
Sbjct: 69 NAVNKAMSVICAKRALPSDLKIATVGQGTARTLRRFGVSGVIVPAVRFDSEALLDMAELD 128
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
+ K +I G + L + + +CY + +
Sbjct: 129 RINVAGKRIIIFRGDNGRELLGETLRKRGASVEYAECYRRIRPEAEIGPLLAAWTRGEMN 188
Query: 169 AILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + + + + + IA N V V + L
Sbjct: 189 GVTVTSSEGLRNLWEMVGDSGRTWLENTPLFVSHERIAGVARKLGFNRVIVTA-AGDDGL 247
Query: 225 LKLLP 229
+ L
Sbjct: 248 VAGLQ 252
>gi|331085794|ref|ZP_08334877.1| hypothetical protein HMPREF0987_01180 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406717|gb|EGG86222.1| hypothetical protein HMPREF0987_01180 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 508
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 79/249 (31%), Gaps = 21/249 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITS 56
M I++TRP +++ R +++ G + P + + E+ L Q Y I TS
Sbjct: 261 MKIMVTRPKEQSSRLAGMLREEGAEVLEAPAIRIVPEVENERVSQVLFHIQKYQWIVFTS 320
Query: 57 SESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + +H I IG +A G + + +
Sbjct: 321 PTGVEVFWSALRQHRVDVRSLSHLRIAVIGSGTARALEAHGMYADLMPEIYD---GEHLG 377
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPL-RVIDCYYSQDIAYPETTMKNLLQ- 165
+ ++ K N + + + + Y + AY + +
Sbjct: 378 AALGEVLSDEHILIPRAKIGNPELIREIKKRSEAVIEDLPIYDTHYEAYGFINYQEEFEQ 437
Query: 166 -NADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D ++F + S+V F LC+ +A +A P +
Sbjct: 438 GKTDYVMFTSASTVRGFAQAAKGLDFSKVQALCIGKQTKAAADHYGMQ-TFMAEQPTLEA 496
Query: 224 LLKLLPLRR 232
++ L+ R+
Sbjct: 497 MVALVKERK 505
>gi|297568517|ref|YP_003689861.1| uroporphyrin-III C-methyltransferase [Desulfurivibrio alkaliphilus
AHT2]
gi|296924432|gb|ADH85242.1| uroporphyrin-III C-methyltransferase [Desulfurivibrio alkaliphilus
AHT2]
Length = 508
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 23/247 (9%), Positives = 60/247 (24%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
I++TR ++A + ++ +G + + L +Y + TS
Sbjct: 258 KILVTRSREQASELVQSLEDLGADCLEGSTIALAEPPDWAPLDQALDKIATYNWLLFTSP 317
Query: 58 ESLSTLPANF-------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ R +A + + +
Sbjct: 318 NAVNFFFKRLAALGLDSRRLHGPQIAVVGTATAEALQNYGIKADLLPARFTAEGLAEALL 377
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY-SQDIAYPETTMKNLLQNADA 169
+ ++ + L + + Y ++ E Q D
Sbjct: 378 AQGVSGRKILLPRALKAREVLPESLRAAGAEVDIAPVYQNTRPPMADEIRQALERQEVDL 437
Query: 170 ILFYARSSVLYFFSLPLPAKIS-------AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
I F + S+ F+L + A+ + + V
Sbjct: 438 ITFTSSSTASNLFALLNWPAEELARRLAGVKIAAIGPITAATVEKAGLKVDIQPETHTIP 497
Query: 223 SLLKLLP 229
++ +
Sbjct: 498 EMVSAIA 504
>gi|310658306|ref|YP_003936027.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
sticklandii DSM 519]
gi|308825084|emb|CBH21122.1| Uroporphyrinogen III synthase/methyltransferase [Clostridium
sticklandii]
Length = 498
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/239 (15%), Positives = 75/239 (31%), Gaps = 12/239 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSSE 58
+++TR +A E ++ +G + + P + + +A SY + TS
Sbjct: 254 RVIVTRARNQASSLVEALEDLGAMVIECPSIKIVEKNNNELKEAIAKLDSYTHLVFTSQN 313
Query: 59 SLSTLPANFCRHTPIF-----AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ I +++ I + +A+ + +
Sbjct: 314 GVRIFMDELLESFDARKLSHLKIASIGEATSKELLSYGIKYDFMPKRFVAEELGALLLEE 373
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ I L ++E K + + Y S+ E T LL AD I F
Sbjct: 374 VTKDSKILLPRAEGARDVLIKMLEDKCTIDEVKIYKSEIEELDEETRNELLDGADYITFT 433
Query: 174 ARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V F+ + + + + + I K V A +L+ +
Sbjct: 434 SSSTVSNFYEMIDENILKKLEETKIISIGPITSETIKEHGKKVHAQAESYSIDGVLETI 492
>gi|323691804|ref|ZP_08106061.1| siroheme synthase [Clostridium symbiosum WAL-14673]
gi|323504170|gb|EGB19975.1| siroheme synthase [Clostridium symbiosum WAL-14673]
Length = 508
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 73/246 (29%), Gaps = 18/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TRP ++A + +++ G V +P ++ LA YG + TS
Sbjct: 259 KVLVTRPRERASQMTARLRAAGAEVVELPAVEIELPKDRSAIQEALARLGDYGWLVFTSP 318
Query: 58 ESLSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHG-KDNSINLAKIIVEQKV 111
+ + AK + E
Sbjct: 319 SGAEVFFELMGEMKTDIRALAGVKLAVIGRATGEMFVKHGIYPDYMPGQYYAKDLGEGLS 378
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNA 167
+ ++ L + + L + I R I Y+++ T + Q
Sbjct: 379 EIAKGERILILRAEKGSPELIKPLQKAGIEYRDIALYHTRYPICNAQTERVKKLLTGQCF 438
Query: 168 DAILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D + F + S+V F P+ +C+ A A + + A P SL
Sbjct: 439 DYVTFTSGSTVRGFMETLKPSAEMLRGFKAVCIGEETRKAAAACGMDCI-TALIPTMDSL 497
Query: 225 LKLLPL 230
+ +
Sbjct: 498 AECMKK 503
>gi|323484736|ref|ZP_08090095.1| siroheme synthase [Clostridium symbiosum WAL-14163]
gi|323401973|gb|EGA94312.1| siroheme synthase [Clostridium symbiosum WAL-14163]
Length = 508
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 73/246 (29%), Gaps = 18/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TRP ++A + +++ G V +P ++ LA YG + TS
Sbjct: 259 KVLVTRPRERASQMTARLRAAGAEVVELPAVEIELPKDRSAIQEALARLGDYGWLVFTSP 318
Query: 58 ESLSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHG-KDNSINLAKIIVEQKV 111
+ + AK + E
Sbjct: 319 SGAEVFFELMGEMKTDIRALAGVKLAVIGRATGEMFVKHGIYPDYMPGQYYAKDLGEGLS 378
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNA 167
+ ++ L + + L + I R I Y+++ T + Q
Sbjct: 379 EIAKGERILILRAEKGSPELIKPLQKAGIEYRDIALYHTRYPICNAQTERVKKLLTGQCF 438
Query: 168 DAILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D + F + S+V F P+ +C+ A A + + A P SL
Sbjct: 439 DYVTFTSGSTVRGFMETLKPSAEMLRGFKAVCIGEETRKAAAACGMDCI-TALIPTMDSL 497
Query: 225 LKLLPL 230
+ +
Sbjct: 498 AECMKK 503
>gi|119510553|ref|ZP_01629684.1| uroporphyrinogen III methylase [Nodularia spumigena CCY9414]
gi|119464820|gb|EAW45726.1| uroporphyrinogen III methylase [Nodularia spumigena CCY9414]
Length = 532
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/254 (14%), Positives = 74/254 (29%), Gaps = 29/254 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
I++TR ++ + +++ +G + MP + +A + + +TS+
Sbjct: 272 ILVTRSSGQSSQFSDRLTALGATVIEMPTLEIVPPSSWDGLDQAIANLIDFDWLILTSTN 331
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ A I +GE +A + F + +A +VE
Sbjct: 332 GVDYFFARLIAQGKDIRALAGVKIAVVGEKTAASLHKYHLQPDFIPPN---FVADSLVEN 388
Query: 110 KVLFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
K +++ L + + Y S+ + K LQN
Sbjct: 389 FPEALQNKKVLFPRVESGGREVLVKELTTQGAEVLEVAAYQSRCPDSIPESAKLALQNRT 448
Query: 168 -DAILFYARSSVLYFFSLPLP----------AKISAAFLCLSNNIASAIPASYKNVVTVA 216
D I F + +V +F L A + + A V A
Sbjct: 449 VDIITFASSKTVKFFCQLISEIFSHNSDITYALEQICIASIGPQTSKTCHALLGRVTIEA 508
Query: 217 CFPKETSLLKLLPL 230
L + +
Sbjct: 509 EEYTLDGLTQAVIK 522
>gi|153826275|ref|ZP_01978942.1| uroporphyrinogen-III synthase [Vibrio cholerae MZO-2]
gi|153830630|ref|ZP_01983297.1| uroporphyrinogen-III synthase [Vibrio cholerae 623-39]
gi|148873902|gb|EDL72037.1| uroporphyrinogen-III synthase [Vibrio cholerae 623-39]
gi|149739943|gb|EDM54122.1| uroporphyrinogen-III synthase [Vibrio cholerae MZO-2]
Length = 260
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 6 MTVLVTRPDEQGAELCQLLHQQGIPALHHPLIAISASPQLAALAEDLSSFDIIIAVSQHA 65
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 66 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 125
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 126 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFAAAECVQKWQLAKVDSLVI 185
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F P L S IA+ + + V L+ L
Sbjct: 186 TSSEQLAFFIRQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 245
>gi|257463591|ref|ZP_05627982.1| uroporphyrinogen-III synthase [Fusobacterium sp. D12]
gi|317061145|ref|ZP_07925630.1| uroporphyrinogen-III synthase [Fusobacterium sp. D12]
gi|313686821|gb|EFS23656.1| uroporphyrinogen-III synthase [Fusobacterium sp. D12]
Length = 487
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 12/235 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A + I G IPV +PL + Y +I S ++
Sbjct: 252 KILVTRDKKQASEMSDYIWDKGGIPVELPLITIEEQELNTA--PLSKYSSILFNSPNGVN 309
Query: 62 TLPANFCRHT-----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ I +G + F ++ ++ + E +
Sbjct: 310 AFFRHIKDIRSLSKIKIGVVGVKTREALEHYKVLPDFMPEEYLMDR--LAEEAVKFTKEK 367
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ ++ + E Y ++ Y+++ + MK L++ D I F + S
Sbjct: 368 ENILIVSSDISPCEPEKYSSLYQRNYEKAVLYHTKKRKLAKEEMKKQLEHIDIITFLSSS 427
Query: 177 SVLYFFSLPLPAK---ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+V F+ ++ + +++ V A +L+ +
Sbjct: 428 AVEAFYENMEGDLEPILNKKIASIGPVTTASLQKLGMTVAYEAKTYTAKALIDTI 482
>gi|153214847|ref|ZP_01949655.1| uroporphyrinogen-III synthase [Vibrio cholerae 1587]
gi|124115090|gb|EAY33910.1| uroporphyrinogen-III synthase [Vibrio cholerae 1587]
Length = 255
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 1 MTVLVTRPDEQGAELCQLLHQQGIPALHHPLIAISASPQLAALAEDLSSFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 61 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 121 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFAAAECVQKWQLAKVDSLVI 180
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F P L S IA+ + + V L+ L
Sbjct: 181 TSSEQLAFFIRQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 240
>gi|300115115|ref|YP_003761690.1| uroporphyrinogen III synthase HEM4 [Nitrosococcus watsonii C-113]
gi|299541052|gb|ADJ29369.1| Uroporphyrinogen III synthase HEM4 [Nitrosococcus watsonii C-113]
Length = 265
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 23/246 (9%), Positives = 68/246 (27%), Gaps = 16/246 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYF----IHDRESVFLAMQQSYGAIAITSS 57
+++TRP ++A + I+ G V P + + + S+
Sbjct: 16 RVLVTRPAEQAEKLSLAIELEGGQAVRFPTVEIGDSEVPAVVEEIIGRLDDFHWAVFVSA 75
Query: 58 ESL-----STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ L A+ + A + + N ++ ++
Sbjct: 76 NAVQRGVPWVLCRREMPANLKIAVVGRATAQALEDFGLPPHLCPSSGYNSEALLAMDELQ 135
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ-DIAYPETTMKNLLQNAD--A 169
+ ++ L + + + Y ++ L N
Sbjct: 136 AMKGQQVVLFRASGGRELLAKTLAKRGAQVEYAEVYRRCLPSPSVAANLRQALTNVPVDV 195
Query: 170 ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ +++ + L + + + + A + VA P + +L+
Sbjct: 196 VITTSKAILENLCHLAGETLLKELRRIPLVVIGSRQAQQARELGFTQIWVAQEPSDAALV 255
Query: 226 KLLPLR 231
+ +
Sbjct: 256 QTIIEH 261
>gi|94264594|ref|ZP_01288378.1| Uroporphyrin-III C-methyltransferase-like [delta proteobacterium
MLMS-1]
gi|93454948|gb|EAT05185.1| Uroporphyrin-III C-methyltransferase-like [delta proteobacterium
MLMS-1]
Length = 513
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 64/246 (26%), Gaps = 19/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
I++TR ++A +++ MG + + L A SY + TS
Sbjct: 259 RILVTRSREQASELVAQLEDMGAACLEGATIAIAEPADWQPLDRAVARLGSYHWLLFTSP 318
Query: 58 ESLSTLPANFCRHTPIFAIGE-------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + +A G +
Sbjct: 319 NAVRFFFRRLAALGLDSRALQGPRLAAVGTATAEALAGQGIKVDLLPEQFTAEGLSSALL 378
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-DA 169
+ ++ D L + ++ Y + + + L Q D
Sbjct: 379 AQGVAGQRILLPRALKARDILPDNLRAAGAGVDIVPVYQNITPPLSDEIRQALKQRQIDL 438
Query: 170 ILFYARSSVLYFFSLPLPAKIS-------AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
I F + S+V F L AK + A+ + V
Sbjct: 439 ITFTSSSTVRNFIDLLGLAKEQLAELLSGVKIAAIGPITAATAHEAGLVVDIQPTEHTIA 498
Query: 223 SLLKLL 228
+L++ +
Sbjct: 499 ALVEAI 504
>gi|260905126|ref|ZP_05913448.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Brevibacterium linens BL2]
Length = 530
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 78/245 (31%), Gaps = 19/245 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAITS 56
++I R ++ T E + ++G + ++P R + + SY + TS
Sbjct: 256 VLIPRTKEQGTSTAEALGELGAVGTVVPTIAVQPPRTPTQMEKAIRGLVDGSYEWVGFTS 315
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAKI 105
++ + F + A+G +A G T LA
Sbjct: 316 VNAVRAVRMWFEDFGLDSRSLSGVKVAAVGGRTAASLIDWGITPDLVPDGEHSARGLAAA 375
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ P ++ L+E + Y + + P ++ ++
Sbjct: 376 WPDYVDDIDPMNTVLLPRADIATEVLVAGLLEKGWDPDDVTAYRTVRASPPPAPIREAIK 435
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ DA LF + S+V + ++ C+ A+ V +A TS
Sbjct: 436 AGDFDAFLFTSSSTVRNLVGIAGKPASTSVICCIGPATANTAAEHGLRVDVLAEEANLTS 495
Query: 224 LLKLL 228
L+ L
Sbjct: 496 LIDGL 500
>gi|37678264|ref|NP_932873.1| uroporphyrinogen-III synthase [Vibrio vulnificus YJ016]
gi|37197003|dbj|BAC92844.1| uroporphyrinogen-III synthase [Vibrio vulnificus YJ016]
Length = 260
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 63/241 (26%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSES 59
M +++TRP ++ + +Q+ G + PL + + + + I S +
Sbjct: 18 MAVLVTRPAEQGQALCQLLQQAGVPALQQPLIDIVANSSLNTLANDLKQSDVIIAVSQHA 77
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + T + ++ +
Sbjct: 78 VQCAEHILKAQQQNWPQNALYLAVGQKTAHYLSKVTHQDVNYPTVSDSEHLLQLPEFNRI 137
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILF 172
K ++ L G L + +R + Y + I + + Q D ++
Sbjct: 138 AGKRVLILRGNGGRELIHQALSQRGADVRYCETYQRELIPFDAVSSLTLWRDQGVDTLIV 197
Query: 173 YARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y + L S IA+ V LL L
Sbjct: 198 TSAEQLDYLHAQMSDEGKFWLYQQRLLVPSERIAAIANRLGFTQVCNVGSASNKDLLAAL 257
Query: 229 P 229
Sbjct: 258 Q 258
>gi|229525015|ref|ZP_04414420.1| uroporphyrinogen-III synthase [Vibrio cholerae bv. albensis VL426]
gi|229338596|gb|EEO03613.1| uroporphyrinogen-III synthase [Vibrio cholerae bv. albensis VL426]
Length = 260
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 6 MTVLVTRPDEQGAELCQLLHQQGIPALHHPLIAISASPQLATLAEDLSSFDIIIAVSQHA 65
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 66 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 125
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 126 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFAAAECVQKWQLAKVDSLVI 185
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F P L S IA+ + + V L+ L
Sbjct: 186 TSSEQLAFFIRQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 245
>gi|212638454|ref|YP_002314974.1| Uroporphyrinogen-III synthase [Anoxybacillus flavithermus WK1]
gi|212559934|gb|ACJ32989.1| Uroporphyrinogen-III synthase [Anoxybacillus flavithermus WK1]
Length = 249
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 72/239 (30%), Gaps = 15/239 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSES 59
+++TR +A + +++ G IP+ +PL ++ L ++ I TS
Sbjct: 6 RVLVTREKSQAKALSQALERYGAIPIELPLIRIERAKQVGQDLLHKWHTFDWIVFTSQNG 65
Query: 60 LSTLPANF-----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + A+GE +A R++ +A+ +VE
Sbjct: 66 VKYFFELIGEMKPPTWPKVAAVGEKTAKALRKRNVVVDLIPN---EFVAESLVEALKPLL 122
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
+ L + + ++ Y + + + LLQ I F
Sbjct: 123 STHARVLLVKGNLARDTLREQLSNIADVKDWIVYETTYNEDAKPKIIELLQQRMIDAITF 182
Query: 173 YARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V F + C+ V ++++ L
Sbjct: 183 TSSSTVHSFVEAIAGENVDLSFVTIACIGPITKQTALHLGIPVHVCPHTYTIDAMIEEL 241
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 2/115 (1%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K ++ K + L + + + + + D I+F +++
Sbjct: 5 KRVLVTREKSQAKALSQALERYGAIPIELPLIRIERAKQVGQDLLHKWHTFDWIVFTSQN 64
Query: 177 SVLYFFSLPLPAKISA--AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
V YFF L K + A A+ V + SL++ L
Sbjct: 65 GVKYFFELIGEMKPPTWPKVAAVGEKTAKALRKRNVVVDLIPNEFVAESLVEALK 119
>gi|320154943|ref|YP_004187322.1| uroporphyrinogen-III synthase [Vibrio vulnificus MO6-24/O]
gi|319930255|gb|ADV85119.1| uroporphyrinogen-III synthase [Vibrio vulnificus MO6-24/O]
Length = 243
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 63/241 (26%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSES 59
M +++TRP ++ + +Q+ G + PL + + + + I S +
Sbjct: 1 MAVLVTRPAEQGQALCQLLQQAGVPALQQPLIDIVANSSLNTLANDLKQSDVIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + T + ++ +
Sbjct: 61 VQCAEHILKAQQQNWPQNALYLAVGQKTAHYLSKVTHQDVNYPTVSDSEHLLQLPEFNRI 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILF 172
K ++ L G L + +R + Y + I + + Q D ++
Sbjct: 121 AGKRVLILRGNGGRELIRQALSQRGADVRYCETYQRELIPFDAVSSLTLWRDQGVDTLIV 180
Query: 173 YARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y + L S IA+ V LL L
Sbjct: 181 TSAEQLDYLHTQMSDEGKFWLYQQRLLVPSERIAAIATQLGFTQVCNVGSASNKDLLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|149181767|ref|ZP_01860258.1| HemD [Bacillus sp. SG-1]
gi|148850508|gb|EDL64667.1| HemD [Bacillus sp. SG-1]
Length = 266
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 73/243 (30%), Gaps = 16/243 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSES 59
I++TR K A + I++ G IP ++PL F + L +SY I TS
Sbjct: 12 ILVTREEKAAKGIADVIKQYGGIPHIVPLISFRPYEDEKESTYLEKLKSYDWIFFTSKNG 71
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI------IVEQKVLF 113
+ H +K + + K+ E F
Sbjct: 72 VHFFFQKLKEHNLSIVGSPTKFAAVGEKTCRAMKSHGIQVDFVPKLYSGFDFAKEFVHSF 131
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AIL 171
++ G Y E +P+ Y + E + +LLQ A+
Sbjct: 132 PQAGRVLLSKGNLAKDTISSYFTERSMPIDEWITYETFFPDAIEKRLSSLLQEKKLSAVT 191
Query: 172 FYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + S+V F + + A +C+ A V V ++
Sbjct: 192 FTSPSTVRGFMKIVNDNGLHEAMNGLAVVCIGPVTREAACRYGLTVQVVPERYTVEDMID 251
Query: 227 LLP 229
L
Sbjct: 252 DLA 254
>gi|194336059|ref|YP_002017853.1| Uroporphyrinogen-III synthase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308536|gb|ACF43236.1| Uroporphyrinogen-III synthase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 247
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 67/245 (27%), Gaps = 15/245 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP +A +K+++ G ++ P + + + TS S
Sbjct: 1 MKTVLVTRPKDQAASFVKKLEEYGLNSIVFPTIEIRPVSGW-KVPDLALFDGVFFTSPNS 59
Query: 60 LSTLPANFCRH--------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + + + ++ E
Sbjct: 60 VGLFMDRLLKESPDELKNLQKLKVWAVGKTTSSDLAAHGVTTEPIPKIADAVTLMEEIGS 119
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA---D 168
++L G + + + + Y + + E+ L
Sbjct: 120 EAIAGHTFLFLRGTLSLGVIPEVIEKRGGHCVELTVYANLTPSLEESAKIKSLLEQGELS 179
Query: 169 AILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F + S+ + FF + + A+A+ +V + S K
Sbjct: 180 CLSFTSPSTAINFFEAMGTTALPSGVQIAAIGTTTANALKKLGVHVDIIPESFDAPSFAK 239
Query: 227 LLPLR 231
+ +
Sbjct: 240 AIAEK 244
>gi|206603979|gb|EDZ40459.1| Uroporphyrin-III C-methyltransferase / synthase [Leptospirillum sp.
Group II '5-way CG']
Length = 513
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 77/254 (30%), Gaps = 26/254 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF------LAMQQSYGAIAIT 55
I++TR + +++++K+G V P + + Y +
Sbjct: 260 RILLTREKESGSPLKDQLEKLGAEVVSCPTIEIRPVSGTEREELVRTIQNLSEYEWLLFL 319
Query: 56 SSESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S + + IF++G ++ + G ++ N
Sbjct: 320 SPNGVRSFFRTMKETGNDIRSLARCRIFSMGPSTTRTLEEYGIHPDATPLESYANGVLEF 379
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+V + + + + G + D L +R I Y + I +++
Sbjct: 380 FRSQVPCSG-QHCLLIRGDRGDRTIPDGLAAMGFKVRQITAYEN-KIPELPDYLRDLVSG 437
Query: 163 --LLQNADAILFYARSSVLYFFSLPLPAKISAAF---LCLSNNIASAIPASYKNVVTVAC 217
++ +FY+ S+ SL S L + A + + +
Sbjct: 438 GFENRDFHLAVFYSPSAFRNLVSLLKNQVQSIRNTTGLAIGPTTADVLQKDGVTNILLPS 497
Query: 218 FPKETSLLKLLPLR 231
P + ++L +
Sbjct: 498 EPTDEAVLNTILQH 511
>gi|83594896|ref|YP_428648.1| uroporphyrinogen III synthase HEM4 [Rhodospirillum rubrum ATCC
11170]
gi|83577810|gb|ABC24361.1| Uroporphyrinogen III synthase HEM4 [Rhodospirillum rubrum ATCC
11170]
Length = 734
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 86/233 (36%), Gaps = 12/233 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +ITRP++ A R ++ G + PL + A+ TS+ +
Sbjct: 1 MRALITRPLEDADRIGALLRARGADVFLEPLLII--LPAAAPGLDLTDAQALVFTSANGV 58
Query: 61 STL-PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
N R P++A+GE + +A GF + + LA +I+ Q PL
Sbjct: 59 RAFADRNALRRLPVYAVGETTGTVASAYGFPDVRIAGGDVRALASLILAQ--ASPDAGPL 116
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSS 177
+++ G L H +R Y ++ A +K ++ A+ ++ +
Sbjct: 117 VHISGTNVAGDLAGSLGAHGFTVRRERLYEARPAAAFSKELKTAFVERSMPAVFLFSPRT 176
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F L A + LS +A A+ V VA P + +LL
Sbjct: 177 ARTFAGLVHKADLLSAMTDVTVYALSPAVADALEGLPLGAVRVAAEPTQDALL 229
>gi|311896762|dbj|BAJ29170.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Kitasatospora setae KM-6054]
Length = 539
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 19/232 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A E+++ G +P +P R + Y IA T
Sbjct: 261 NVLVPRTKEQAHGLSEQLRSYGAVPQEVPTIAVEPPRTPQQMERAIKGLVTGRYEWIAFT 320
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAK 104
S ++ + F + + A+GE +A G L +
Sbjct: 321 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGETTAQALVDFGVKPDLVPSGEQSAAGLLE 380
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P ++ L+E + + Y + + P + +
Sbjct: 381 DWPPYDPVFDPIDRVLLPRADIATETLVAGLVELGWEVDDVTAYRTVRASPPPAETREAI 440
Query: 165 QN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVT 214
+ DA+LF + S+V + C+ A V
Sbjct: 441 KGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDV 492
>gi|229515847|ref|ZP_04405305.1| uroporphyrinogen-III synthase [Vibrio cholerae TMA 21]
gi|229527139|ref|ZP_04416533.1| uroporphyrinogen-III synthase [Vibrio cholerae 12129(1)]
gi|254226597|ref|ZP_04920178.1| uroporphyrinogen-III synthase [Vibrio cholerae V51]
gi|125620869|gb|EAZ49222.1| uroporphyrinogen-III synthase [Vibrio cholerae V51]
gi|229335370|gb|EEO00853.1| uroporphyrinogen-III synthase [Vibrio cholerae 12129(1)]
gi|229347110|gb|EEO12071.1| uroporphyrinogen-III synthase [Vibrio cholerae TMA 21]
Length = 260
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 6 MTVLVTRPDEQGAELCQLLHQQGIPALHHPLLAISASPQLAALAEDLSSFDIIIAVSQHA 65
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 66 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 125
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 126 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFAAAECVQKWQLAKVDSLVI 185
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F P L S IA+ + + V L+ L
Sbjct: 186 TSSEQLAFFIRQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 245
>gi|254851503|ref|ZP_05240853.1| uroporphyrinogen-III synthase [Vibrio cholerae MO10]
gi|255743927|ref|ZP_05417882.1| uroporphyrinogen-III synthase [Vibrio cholera CIRS 101]
gi|262151166|ref|ZP_06028305.1| uroporphyrinogen-III synthase [Vibrio cholerae INDRE 91/1]
gi|262167036|ref|ZP_06034753.1| uroporphyrinogen-III synthase [Vibrio cholerae RC27]
gi|254847208|gb|EET25622.1| uroporphyrinogen-III synthase [Vibrio cholerae MO10]
gi|255738410|gb|EET93800.1| uroporphyrinogen-III synthase [Vibrio cholera CIRS 101]
gi|262024554|gb|EEY43238.1| uroporphyrinogen-III synthase [Vibrio cholerae RC27]
gi|262031060|gb|EEY49685.1| uroporphyrinogen-III synthase [Vibrio cholerae INDRE 91/1]
gi|327483020|gb|AEA77427.1| Uroporphyrinogen-III synthase [Vibrio cholerae LMA3894-4]
Length = 255
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 1 MTVLVTRPDEQGAELCQLLHQQGIPALHHPLLAISASPQLAALAEDLSSFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 61 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 121 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFAAAECVQKWQLAKVDSLVI 180
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F P L S IA+ + + V L+ L
Sbjct: 181 TSSEQLAFFIRQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 240
>gi|83313520|ref|YP_423784.1| uroporphyrinogen-III synthase [Magnetospirillum magneticum AMB-1]
gi|82948361|dbj|BAE53225.1| Uroporphyrinogen-III synthase [Magnetospirillum magneticum AMB-1]
Length = 242
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 94/236 (39%), Gaps = 12/236 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++TRP + + + +++ G ++ PL I +TS+ +
Sbjct: 1 MRALVTRPKEDSEGVAQALKQRGLDVMVEPLLDIAPVE--GAKPDLGGAQGILVTSANGI 58
Query: 61 STLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
L R P++A+G+ASA AR+ GFT++ + LA+++ + + L
Sbjct: 59 RALGRLTPGRELPVWAVGDASARAAREMGFTRVESAGGDVETLAELVAAR--VDPQGGAL 116
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LFYARSS 177
++ G L +R Y + +++ L+N LF++ +
Sbjct: 117 LHAAGTVTAGDLSGRLSALGFQVRRQVLYRAVTATRLSDGLRDALRNGQLHLALFFSPRT 176
Query: 178 VLYFFSLPLPAKISAAFLCL-----SNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F +L + A + + + S N+++ + V+ A P + +LL +
Sbjct: 177 ARTFATLAVEAGVRDSLAAIAAYGLSANVSAELGPLPWRVLRQAAEPTQAALLAAI 232
>gi|254291928|ref|ZP_04962709.1| uroporphyrinogen-III synthase [Vibrio cholerae AM-19226]
gi|150422138|gb|EDN14104.1| uroporphyrinogen-III synthase [Vibrio cholerae AM-19226]
Length = 260
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 6 MTVLVTRPDEQGTELCQLLHQQGIPALHHPLIAISASPQLTALAEDLSSFDIIIAVSQHA 65
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 66 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 125
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 126 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFAAAECVQKWQLAKVDSLVI 185
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F P L S IA+ + + V L+ L
Sbjct: 186 TSSEQLAFFIRQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 245
>gi|92116184|ref|YP_575913.1| uroporphyrinogen III synthase HEM4 [Nitrobacter hamburgensis X14]
gi|91799078|gb|ABE61453.1| Uroporphyrinogen III synthase HEM4 [Nitrobacter hamburgensis X14]
Length = 248
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 15/241 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP T ++ G ++ P+ F + + YGA+ +TS +L
Sbjct: 1 MAVLVTRPEPDNEATAAVLRARGLEVLLSPVLRFEAVA--FEMDPDERYGAVVVTSGNAL 58
Query: 61 STLPANFCRHTP----IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
L A+ R + +FA+G +A ARQ GF + +++ L +I++
Sbjct: 59 RALAAHPARESLLKLAVFAVGRHTAEAARQAGFQDVVAAGGDAVALRALIIKSVRTKPLA 118
Query: 117 K--PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++YL R+ L + + CY +A + + +L
Sbjct: 119 KGARILYLAAADRSCDLAGELGARGLAVVTATCYRMTPVASLSREVCDAFAAHRISAVLH 178
Query: 173 YARSSVLYFFSLPLPAKISAAFL-----CLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
Y+R S F + + L C+S +AS + + V VA P E ++L+
Sbjct: 179 YSRRSARAFLDAVRIGGVEISALAVPQCCISGTVASILRDAGAPHVVVARAPAENAVLEA 238
Query: 228 L 228
L
Sbjct: 239 L 239
>gi|146294671|ref|YP_001185095.1| uroporphyrinogen III synthase HEM4 [Shewanella putrefaciens CN-32]
gi|145566361|gb|ABP77296.1| Uroporphyrinogen III synthase HEM4 [Shewanella putrefaciens CN-32]
Length = 246
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 67/246 (27%), Gaps = 16/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSE 58
M +++TRP + + + G + PL + + I S+
Sbjct: 1 MKVLLTRPEGRNQSMVDALNARGITHYVTPLLGVEPTNDITTDASHPLAGTDIIICISAN 60
Query: 59 SLSTLPANFCRHTPIFAIGE--------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + A + A + D+ ++
Sbjct: 61 AVIFANKALNKINAQIATWPKVQYFAVGHATWEALDQLGICAVEAPDDCQQTEGLLTLAS 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ P K + + G + L +R + Y + Q+
Sbjct: 121 LQHIPAKKVTIIRGVGGREALAEQLTRRGANVRYWEVYQRVCPPLDGYAITQQWQHFGID 180
Query: 170 -ILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + L S + SN + + A N VT AC ++
Sbjct: 181 TIVVTSGEVLNNLIKLVPKELFAWLRSCHIIVPSNRVEAQAHAFGINHVTNACAANSKAV 240
Query: 225 LKLLPL 230
L L L
Sbjct: 241 LNALKL 246
>gi|15640151|ref|NP_229778.1| uroporphyrinogen-III synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121587740|ref|ZP_01677501.1| uroporphyrinogen-III synthase [Vibrio cholerae 2740-80]
gi|121728311|ref|ZP_01681342.1| uroporphyrinogen-III synthase [Vibrio cholerae V52]
gi|147674713|ref|YP_001218299.1| uroporphyrinogen-III synthase [Vibrio cholerae O395]
gi|153818936|ref|ZP_01971603.1| uroporphyrinogen-III synthase [Vibrio cholerae NCTC 8457]
gi|153822317|ref|ZP_01974984.1| uroporphyrinogen-III synthase [Vibrio cholerae B33]
gi|227080355|ref|YP_002808906.1| uroporphyrinogen-III synthase [Vibrio cholerae M66-2]
gi|229508397|ref|ZP_04397901.1| uroporphyrinogen-III synthase [Vibrio cholerae BX 330286]
gi|229508922|ref|ZP_04398412.1| uroporphyrinogen-III synthase [Vibrio cholerae B33]
gi|229517036|ref|ZP_04406482.1| uroporphyrinogen-III synthase [Vibrio cholerae RC9]
gi|229606670|ref|YP_002877318.1| uroporphyrinogen-III synthase [Vibrio cholerae MJ-1236]
gi|298501112|ref|ZP_07010912.1| uroporphyrinogen-III synthase [Vibrio cholerae MAK 757]
gi|9654519|gb|AAF93297.1| uroporphyrinogen-III synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548039|gb|EAX58117.1| uroporphyrinogen-III synthase [Vibrio cholerae 2740-80]
gi|121629441|gb|EAX61870.1| uroporphyrinogen-III synthase [Vibrio cholerae V52]
gi|126510498|gb|EAZ73092.1| uroporphyrinogen-III synthase [Vibrio cholerae NCTC 8457]
gi|126520143|gb|EAZ77366.1| uroporphyrinogen-III synthase [Vibrio cholerae B33]
gi|146316596|gb|ABQ21135.1| uroporphyrinogen-III synthase [Vibrio cholerae O395]
gi|227008243|gb|ACP04455.1| uroporphyrinogen-III synthase [Vibrio cholerae M66-2]
gi|227011879|gb|ACP08089.1| uroporphyrinogen-III synthase [Vibrio cholerae O395]
gi|229346099|gb|EEO11071.1| uroporphyrinogen-III synthase [Vibrio cholerae RC9]
gi|229354039|gb|EEO18972.1| uroporphyrinogen-III synthase [Vibrio cholerae B33]
gi|229354670|gb|EEO19592.1| uroporphyrinogen-III synthase [Vibrio cholerae BX 330286]
gi|229369325|gb|ACQ59748.1| uroporphyrinogen-III synthase [Vibrio cholerae MJ-1236]
gi|297540146|gb|EFH76207.1| uroporphyrinogen-III synthase [Vibrio cholerae MAK 757]
Length = 260
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 6 MTVLVTRPDEQGAELCQLLHQQGIPALHHPLLAISASPQLAALAEDLSSFDIIIAVSQHA 65
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 66 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 125
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 126 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFAAAECVQKWQLAKVDSLVI 185
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F P L S IA+ + + V L+ L
Sbjct: 186 TSSEQLAFFIRQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 245
>gi|298252252|ref|ZP_06976055.1| Uroporphyrinogen III synthase HEM4 [Ktedonobacter racemifer DSM
44963]
gi|297546844|gb|EFH80712.1| Uroporphyrinogen III synthase HEM4 [Ktedonobacter racemifer DSM
44963]
Length = 290
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 77/270 (28%), Gaps = 43/270 (15%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----------YGA 51
I++TR ++A E+++ +G +P+ P ++ L Y
Sbjct: 15 RILVTRTREQASVFSERLRALGALPIEFPTIRIEPPQDWSQLDAALHRLYAAEQSLAYDW 74
Query: 52 IAITSSESLSTLPANFC-------------RHTPIFAIGEASACLARQKGFTQIFHGKDN 98
+ +TS+ +S I IG A+A + G ++
Sbjct: 75 LILTSANGVSICMQRLRALGLETARLREVSPGLHIATIGPATAATLQDYGLHADLVPEEY 134
Query: 99 SIN----LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA 154
QK L + ++ L + + + YY++ +A
Sbjct: 135 VAEGVIAAMHEWARQKELSLQGQRILLARAAEARKVLVVELEQAGAQVDEVPAYYTRPVA 194
Query: 155 YPETTMKNLL-----QNADAILFYARSSVLYFFSLPL-----------PAKISAAFLCLS 198
+ + +L D + F + S+V F S +
Sbjct: 195 SDDEQGREILRRLQRHELDVLTFTSSSTVRNFVSWLNSCTQGVGLDATELLAGVRIASIG 254
Query: 199 NNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +V A L++ +
Sbjct: 255 PITSQTARDLGLHVDIEAQTFTIDGLVEAI 284
>gi|308535161|ref|YP_002137234.2| bifunctional uroporphyrinogen III
C2,C7-methyltransferase/uroporphyrinogen III synthase
[Geobacter bemidjiensis Bem]
gi|308052506|gb|ACH37438.2| uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen
III synthase [Geobacter bemidjiensis Bem]
Length = 514
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 63/244 (25%), Gaps = 22/244 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
+++TR +A K++++G P + L S+ I TS
Sbjct: 261 VLVTRGADQAGGFTSKLEQLGARAYCCPTIEITPPTDHSALDEAIEGLDSFNWIIFTSYN 320
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ A H + A+G +A Q G D +I
Sbjct: 321 AVKYFFARLSEHNLDTRALGRCRVCAVGPKTAAALAQYGIRADLIPSDYKA--EGVIEIF 378
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + +++ G + L + Y + L++
Sbjct: 379 SEMDMAGQWVLFPKGDRAREVITEELGRMGAQVIAPVAYANHTPDDIPAEALAALEDGRI 438
Query: 170 --ILFYARSSVLYFFSLPLPAK-----ISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
F + S+V ++ + + + V
Sbjct: 439 DCATFTSSSTVQNLAAILGENRFLHLMQGVKVASIGPITSKTCRDLGLEVHMEPAEYTLD 498
Query: 223 SLLK 226
+L
Sbjct: 499 ALAA 502
>gi|307826232|ref|ZP_07656441.1| Uroporphyrinogen III synthase HEM4 [Methylobacter tundripaludum
SV96]
gi|307732694|gb|EFO03562.1| Uroporphyrinogen III synthase HEM4 [Methylobacter tundripaludum
SV96]
Length = 256
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 73/239 (30%), Gaps = 14/239 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSE 58
+++TRP +A I++ G I V P + + L + + S+
Sbjct: 9 RVLVTRPEHQAENLSRLIEQRGGIAVRFPTLEIVSRDDDRIKSTLENLDGFQWVVFISAN 68
Query: 59 SLSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+++ P FA + A + + + N ++ ++
Sbjct: 69 AVNFALKTNSGKIPRTKSVRFAAVGQATAQAMKMAGLPVDLVPEYGYNSEALLEMPQLQQ 128
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AIL 171
+ + + G+ L + ++ Y + + LL I
Sbjct: 129 VEGQNCLIVRGEGGREQLATTLRSRGAEVDYLEVYKRIIPRMDSSPVVELLAQHRLDVIT 188
Query: 172 FYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ ++ + + +S+ I N +TV P +T++L+
Sbjct: 189 VTSAEALQNLSLMLGEKNNKLLSLIPLVVVSDRIRCLAADMGFNRITVTDSPIDTAILE 247
>gi|319651736|ref|ZP_08005862.1| uroporphyrinogen-III synthase [Bacillus sp. 2_A_57_CT2]
gi|317396555|gb|EFV77267.1| uroporphyrinogen-III synthase [Bacillus sp. 2_A_57_CT2]
Length = 260
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 78/240 (32%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITS 56
M +++ R K+A IQ G IPV +PL F ++ L Q+Y + TS
Sbjct: 10 MTVLVPRGKKQAHSFSALIQSYGGIPVEIPLIAFETLQDKETLYKTHKRIQTYDWVIFTS 69
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ ++ N + P I + + +A+ VE + +
Sbjct: 70 ATAVDAFFENLSQGGPFPNIAVIGEKTKKLLMDKGLKVQFMPRDYVAEGFVEDFLPLVEE 129
Query: 117 K-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFY 173
++ G + L E+ + I Y + +K L D + F
Sbjct: 130 GMKVLIPKGNLARDYIAASLSENGADVDEIIVYETTFPRESIGLLKKQLSGKGLDILAFT 189
Query: 174 ARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V +F A + C+ A V V ++LK +
Sbjct: 190 SPSTVDHFIGALKELGYENAVKDSVVGCIGPVTRERAKAYGLQVHAVPEEYTVHNMLKSI 249
>gi|222087477|ref|YP_002546014.1| uroporphyrinogen-III synthase protein [Agrobacterium radiobacter
K84]
gi|221724925|gb|ACM28081.1| uroporphyrinogen-III synthase protein [Agrobacterium radiobacter
K84]
Length = 241
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 131/240 (54%), Gaps = 14/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +V+TRP RT ++ +MG+ P+ +PLS +HD ++ A+ ++ GAIA+TS+E++
Sbjct: 1 MRVVVTRPQHSGERTVRRLTEMGHEPLPLPLSEPVHDVDAARQALSETQGAIAVTSAEAI 60
Query: 61 STL-----PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
TL P+FA+G+A+A AR GFT + + + I LA++I
Sbjct: 61 RTLAALGQNIAPHLGRPLFAVGKATAKEARILGFTHVLTSEGSGIELAELIA--HNRAGM 118
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFY 173
Q+ L+YL G PR FE E IPLR ++CY+ DI + T++ + A+LFY
Sbjct: 119 QQTLLYLAGSPRAAGFETRSTELNIPLRTVECYHMLDITPDDATLRKFFIDTPADAVLFY 178
Query: 174 ARSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R + L FFSLP A FLCLS IA A+PA + +A P E SLL LL
Sbjct: 179 SRQTALRFFSLPFLRQQPDALAPTRFLCLSEAIADAVPALLRAQSDIAAMPDEDSLLALL 238
>gi|209551272|ref|YP_002283189.1| uroporphyrinogen-III synthase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537028|gb|ACI56963.1| Uroporphyrinogen III synthase HEM4 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 235
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 17/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A +T ++++ MG+ P+++PL +HD + A+ ++ GAIA+TS+E++
Sbjct: 1 MRVLVTRPAHSAEKTAQRLRDMGHEPLLLPLRQPVHDSTAAAAALARTSGAIAVTSAEAV 60
Query: 61 STLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L A P+FA+GE +A AR GF + N +LA+++ Q
Sbjct: 61 RVLSALGEQLRPHFARPLFAVGETTAEAARSLGFGSVASSTGNGRDLAELVGAQAADG-- 118
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFY 173
L+YL G PR FE L + I V +CY Q + + ++ + DA+LFY
Sbjct: 119 ---LLYLAGTPRAETFEAGLRQRGIGFSVAECYRMQPVVPGQAEIEAIFAGGRPDAVLFY 175
Query: 174 ARSSVLYFF-----SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R + FF L L + LCLS +A AIPA+ K +A P E SLL LL
Sbjct: 176 SRQTADDFFGVAELRLALREESGIRLLCLSEAVAQAIPAALKKNAAIAPMPDEKSLLSLL 235
>gi|238798584|ref|ZP_04642060.1| Uroporphyrinogen-III synthase [Yersinia mollaretii ATCC 43969]
gi|238717540|gb|EEQ09380.1| Uroporphyrinogen-III synthase [Yersinia mollaretii ATCC 43969]
Length = 247
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 73/245 (29%), Gaps = 19/245 (7%)
Query: 6 TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSESLS 61
TRP + +++ +G + PL F + L Q+ + S ++
Sbjct: 2 TRPSPSGEQLVSRLRALGRVAYHAPLIDFSPGDDLPKLPTLLQEMQAGDLVFALSQNAVR 61
Query: 62 TLPANFCRHTPIF-------AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
R+ + AIG +A + ++ +
Sbjct: 62 YANPLLKRNNLSWPAQLSYYAIGRGTALALHTASHLHVTFPPMG-ETSEMLLSLPDLQKL 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILF 172
K + L G + L + + +CY I Y + Q + ++
Sbjct: 121 AGKKALLLRGNGGRELLGESLAQRGATVTFCECYQRSPIFYDGSEQSAHWQRAGVNILVV 180
Query: 173 YARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + ++L + + +S+ +A+ + VA +L++
Sbjct: 181 TSGEMLQQIYTLVPDYYRSSWLLRCHLVVVSDRLAALAAQMGWRDIQVAENADNDALIRA 240
Query: 228 LPLRR 232
L +
Sbjct: 241 LQELK 245
>gi|218710950|ref|YP_002418571.1| uroporphyrinogen-III synthase [Vibrio splendidus LGP32]
gi|218323969|emb|CAV20331.1| Uroporphyrinogen-III synthase [Vibrio splendidus LGP32]
Length = 242
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 71/241 (29%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP + +++ G + PL + + S L+ + I S +
Sbjct: 1 MTVLVTRPGSEGQSLCQQLADEGIQAIHHPLIRIVDNPHSSDLSTQLNNSDIIIAVSHHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + + I+ ++ + ++ ++
Sbjct: 61 VTAAQNILSKTSSIWPTSPLYLGVGQKTAHVLSKVSKQKVNYPKVSDSEHLLKLTELNGV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ L G D L+ + + Y + I + + N ++
Sbjct: 121 DNKSILILRGNGGRELIRDSLLNRGAQVSYCETYRREYIPINDHNIYQTWINKKTSKVVI 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ + Y S+ ++ S I + VT LL L
Sbjct: 181 TSQEQLEYLCSITPDEYLAWLSTRQLFVPSQRIVERAQQLGFSNVTNTQSATNQILLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|24375796|ref|NP_719839.1| uroporphyrinogen-III synthase [Shewanella oneidensis MR-1]
gi|24350744|gb|AAN57283.1|AE015863_12 uroporphyrinogen-III synthase [Shewanella oneidensis MR-1]
Length = 246
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 71/247 (28%), Gaps = 18/247 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSE 58
M +++TRP + + + + G + PL + + S+
Sbjct: 1 MKVLLTRPEGRNQSMVDALNERGIEHCVTPLLCVEATPALPPETSHPLANVDMVVCISAN 60
Query: 59 SLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++S F P FA+G A+ +Q D+ ++
Sbjct: 61 AVSFADDTFKANDANVKGWPKVPYFAVGHATWEALQQIDI-DALEAPDDCQQTEGLLTLP 119
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ K + + G + L +R + Y T + +
Sbjct: 120 TLQHIQGKKITIIRGVGGREALAEQLTSRGAQVRYWEVYQRACPPLDGTIITQQWIDLGI 179
Query: 170 --ILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + +L S + SN + + A VT A +
Sbjct: 180 DTVVVTSGEVLDNLINLVPKELFAWLRSCHIIVPSNRVEAQAHAFGITQVTNANAANSKA 239
Query: 224 LLKLLPL 230
+L L L
Sbjct: 240 VLNALKL 246
>gi|218245888|ref|YP_002371259.1| uroporphyrin-III C-methyltransferase [Cyanothece sp. PCC 8801]
gi|218166366|gb|ACK65103.1| uroporphyrin-III C-methyltransferase [Cyanothece sp. PCC 8801]
Length = 505
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 28/255 (10%), Positives = 65/255 (25%), Gaps = 25/255 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
+++TR +++ + +Q+ G + MP + L S+ + +TS+
Sbjct: 248 VLVTRAAEQSSQFTLMLQQEGAKVIEMPALEILPPSSWQELDTAISQLSSFDWLILTSAN 307
Query: 59 SLSTLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ + +A +VE
Sbjct: 308 GVKFFFERLYHLGHDVRALGGIKLAVVGKKTDSVLKNYGLKADFIPPNFVADSLVETFPE 367
Query: 113 FTPQKPLIYLGGKPRNFH-FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DA 169
K +++ + L + + + Y S + + + LQ +
Sbjct: 368 SLTNKKVLFPRVETGGRDLLVQELQKQSAQVIEVPAYQSGCPSKIDPEVWQALQQKTVNI 427
Query: 170 ILFYARSSVLYFFSLPLPA------------KISAAFLCLSNNIASAIPASYKNVVTVAC 217
I F + +V F+ L + + V A
Sbjct: 428 ITFASSKTVQNFYQLIKQELEANYLEAIPAILERVQIASIGPQTSKTCYELLGRVDIEAT 487
Query: 218 FPKETSLLKLLPLRR 232
L L ++
Sbjct: 488 EYTLEGLTDALIKKQ 502
>gi|120600513|ref|YP_965087.1| uroporphyrinogen III synthase HEM4 [Shewanella sp. W3-18-1]
gi|120560606|gb|ABM26533.1| Uroporphyrinogen III synthase HEM4 [Shewanella sp. W3-18-1]
Length = 246
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 67/246 (27%), Gaps = 16/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSE 58
M +++TRP + + + G + PL + + I S+
Sbjct: 1 MKVLLTRPEGRNQSMVDALNARGIAHYVTPLLGVEPTNDITTDASHPLAGTDIIICISAN 60
Query: 59 SLSTLPANFCRHTPIFAIGE--------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + A + A + D+ ++
Sbjct: 61 AVIFANKALNKINAQIATWPKVQYFAVGHATWEALDQLGICAVEAPDDCQQTEGLLTLTS 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ P K + + G + L +R + Y + Q+
Sbjct: 121 LQHIPAKKVTIIRGVGGREALAEQLTSRGANVRYWEVYQRVCPPLDGYAITQQWQHFGID 180
Query: 170 -ILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + L S + SN + + A N VT AC ++
Sbjct: 181 TIVVTSGEVLNNLIKLVPKELFAWLRSCHIIVPSNRVEAQAHAFGINHVTNACAANSKAV 240
Query: 225 LKLLPL 230
L L L
Sbjct: 241 LNALKL 246
>gi|327469192|gb|EGF14664.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK330]
Length = 241
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 68/232 (29%), Gaps = 4/232 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A+ + TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQAGFETHHVPLIRCQSLPLPEAVQAILSEADWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L P + ++
Sbjct: 64 EAFSPYLKADYQIATIGPQTSQALSKLGRDCDFQASS--HYGLDFIQEWLDLDLPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHDVWAWPMYETTSNPAGQDQLETYLSQEDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
F ++ S + A A+ S V P ++ + +
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQAVKESGYGVDYQPQSPSVEEMVNEIIKK 233
>gi|328953553|ref|YP_004370887.1| uroporphyrin-III C-methyltransferase [Desulfobacca acetoxidans DSM
11109]
gi|328453877|gb|AEB09706.1| uroporphyrin-III C-methyltransferase [Desulfobacca acetoxidans DSM
11109]
Length = 515
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 60/246 (24%), Gaps = 19/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-----SVFLAMQQSYGAIAITS 56
I++TR ++ + + + G + P + + Y + TS
Sbjct: 259 RILVTRSRRQVSAFVKLLTEYGATCLEAPTIEIAPPDDGYVALDEAIQRLDRYQWLVFTS 318
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------DNSINLAKIIVEQ 109
+ A A + H ++
Sbjct: 319 PNGVVAFFERLFGSGRDVRALGACKLAAIGAATAEALHEHGLIADVVPEDFRAEGLVASL 378
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
L P + L+ + + + + V Y + A+ ++ L +
Sbjct: 379 SPLVHPGQLLLLPRAQEAREVLPQEMARQGVIVHVAPSYKTVPPAHLPPDTESALARGEI 438
Query: 170 --ILFYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ F + S+V F L A + A + +
Sbjct: 439 DVLTFASSSTVTNFVRLIGLEHFKKLAAQAVIAAIGPITAKTLNQFGLEARIQSQTYTIP 498
Query: 223 SLLKLL 228
+L +
Sbjct: 499 ALAAAI 504
>gi|110598699|ref|ZP_01386963.1| Uroporphyrinogen-III synthase [Chlorobium ferrooxidans DSM 13031]
gi|110339693|gb|EAT58204.1| Uroporphyrinogen-III synthase [Chlorobium ferrooxidans DSM 13031]
Length = 247
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 64/244 (26%), Gaps = 15/244 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP ++A +++++ G + P + + TS S
Sbjct: 1 MKTVLVTRPKQQAASFVKELEQYGLNSFVFPTIEIRPVSGWSV-PDLSKFDGVFFTSPNS 59
Query: 60 LSTL--------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+S P + + ++ E
Sbjct: 60 VSFFLDRLLTESPEKLEHLQKLKIWAVGKTTSGDLAKHGVTTEPLPKIADAVTLMEEIGS 119
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA---D 168
+ +++ G D + + + Y + + ET L
Sbjct: 120 EAIAGRTFLFVRGSLSLGTIPDVIEKRGGHCVELTVYENLPPSLEETVKVKALLEQGKLS 179
Query: 169 AILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F + S+ + FF + + ASA+ V + K
Sbjct: 180 CLSFTSPSTAINFFEAIESTALPSGVLVAAIGTTTASALEKIGLQVDIIPESFDGPGFAK 239
Query: 227 LLPL 230
+
Sbjct: 240 AIAK 243
>gi|331270185|ref|YP_004396677.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum BKT015925]
gi|329126735|gb|AEB76680.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum BKT015925]
Length = 498
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 74/246 (30%), Gaps = 18/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
IV+TR ++ E+I ++G P+ +P +V L + + TS
Sbjct: 253 NIVVTRSRVQSSNLVERIIELGGNPIEVPAIKIEEIPSNVELDNGIEYINEFNYLIFTSR 312
Query: 58 ESLSTLPANFC-------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + + + + + I ++ K
Sbjct: 313 NAVKIFFERLFELNFDSRKLGNLKVVAIGTGTSDELRHYGIIPDVLPKKFVAESVVELLK 372
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ + + + + L + + + Y + + + + NLL N +
Sbjct: 373 EVLQKEDKVFIPRSSEARTYLVEELNKL-CNVTEVKIYNTIKGSGNKDDIINLLNNKNID 431
Query: 170 -ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I F + S+V F + I + + + I V A +
Sbjct: 432 YITFTSSSTVKNFIEIMGKQNIEKLKDTKLVSIGPITSKTIEDFGLKVYNEAEEYTIEGI 491
Query: 225 LKLLPL 230
+K L
Sbjct: 492 IKTLIR 497
>gi|323500166|ref|ZP_08105111.1| uroporphyrinogen-III synthase [Vibrio sinaloensis DSM 21326]
gi|323314795|gb|EGA67861.1| uroporphyrinogen-III synthase [Vibrio sinaloensis DSM 21326]
Length = 247
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 72/241 (29%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-QQSYGAIAITSSES 59
M +++TRP ++ ++ G + + P+ + LA + I S +
Sbjct: 1 MAVLVTRPGEQGKALCRQLTDAGILALHHPVISIQPGDQLTTLASCIEQCDYIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ H ++ TQ + +++ +
Sbjct: 61 VTFSHQVLQHHHQLWPDRVIYLAVGQKTAHVLSKVTQQKVHYPEIGDSEHLLMLDALTNV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LF 172
K ++ L G D LI + ++ Y ++IA+ + + Q+ +
Sbjct: 121 MGKEIVILRGNGGRELIFDTLIARGAKVEYVEAYKRENIAFRSELLVPIWQDKRITQLVI 180
Query: 173 YARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + YF S ++ + S I N V LL L
Sbjct: 181 TSSGQLEYFVSQFSEPELLWLYNLTLYVPSERIVQEALTLGFNKVFNTNSASNNDLLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|84393565|ref|ZP_00992319.1| uroporphyrinogen-III synthetase [Vibrio splendidus 12B01]
gi|84375844|gb|EAP92737.1| uroporphyrinogen-III synthetase [Vibrio splendidus 12B01]
Length = 242
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 71/240 (29%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP + +++ G + PL + + S L+ + I S +
Sbjct: 1 MTVLVTRPGSEGQSLCQQLADEGIQAIHHPLIRIVDNPHSSDLSTQLNNSDIIIAVSHHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + + I+ ++ + ++ ++
Sbjct: 61 VTAAQNILSKTSSIWPTSPLYLGVGQKTAHVLSKVSKQKVNYPQVSDSEHLLKLTELNGV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ L G D L+ + + Y + I + + N ++
Sbjct: 121 DNKSILILRGNGGRELIRDSLLNRGAQVSYCETYRREYIPINDHNIYQTWINKKTSKVVI 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ + Y S+ ++ S I + VT LL L
Sbjct: 181 TSQEQLEYLCSITPDEYLAWLSTRQLFVPSQRIVERAQQLGFSNVTNTQSATNQILLAAL 240
>gi|257058936|ref|YP_003136824.1| uroporphyrin-III C-methyltransferase [Cyanothece sp. PCC 8802]
gi|256589102|gb|ACU99988.1| uroporphyrin-III C-methyltransferase [Cyanothece sp. PCC 8802]
Length = 505
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/255 (10%), Positives = 66/255 (25%), Gaps = 25/255 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
+++TR +++ + +Q+ G + MP + L S+ + +TS+
Sbjct: 248 VLVTRAAEQSSQFTLMLQQEGAKVIEMPALEILPPSSWQELDTAISQLSSFDWLILTSAN 307
Query: 59 SLSTLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ + +A +VE
Sbjct: 308 GVKFFFERLYHLGHDVRALGGIKLAVVGKKTDSVLKNYGLKADFIPPNFVADSLVETFPE 367
Query: 113 FTPQKPLIYLGGKPRNFH-FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DA 169
K +++ + L + + + Y S + + + LQ +
Sbjct: 368 SLTNKKVLFPRVETGGRDLLVQELQKQSAQVIEVPAYQSGCPSKIDPEVWQALQQKTVNI 427
Query: 170 ILFYARSSVLYFFSLPLPA------------KISAAFLCLSNNIASAIPASYKNVVTVAC 217
I F + +V F+ L + + + V A
Sbjct: 428 ITFASSKTVQNFYQLIKQELGANYLELIPAMLDQVCLASIGPQTSKTCYELFGRVDIEAT 487
Query: 218 FPKETSLLKLLPLRR 232
L L ++
Sbjct: 488 EYTLEGLTDALIKKQ 502
>gi|288553610|ref|YP_003425545.1| uroporphyrinogen-III synthase [Bacillus pseudofirmus OF4]
gi|288544770|gb|ADC48653.1| uroporphyrinogen-III synthase [Bacillus pseudofirmus OF4]
Length = 262
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 78/245 (31%), Gaps = 20/245 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAITSSE 58
++++TR +A +I++ G I ++PL F + + + + TS+
Sbjct: 10 HVLVTRAKDQAEPFINQIEEAGGISHIIPLLLFQPVKSDQLEKAITYINEFDWLVFTSAN 69
Query: 59 SLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ F + I +GE + + + G + + V
Sbjct: 70 GVRFFLEEFKKRHLPSSLKARIAVVGEKTEAVLDEYGLKADLLP--DRYVAEDLAVTLTT 127
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN---AD 168
T + ++ G L + I + + Y + + + +++ D
Sbjct: 128 HITAGEKILMPRGNLGRTLLPKELEKAGIEVSDLTIYETVCPPEAKDQFRAFIKSGQAID 187
Query: 169 AILFYARSSVLYFFSL-----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V +F + A C+ + NV A
Sbjct: 188 VITFTSSSAVRHFAQVLLELRIEEPFKDAKIACIGPIAEKTATEYHLNVDITASTYTIEG 247
Query: 224 LLKLL 228
L++ +
Sbjct: 248 LIEAI 252
>gi|299133149|ref|ZP_07026344.1| Uroporphyrinogen III synthase HEM4 [Afipia sp. 1NLS2]
gi|298593286|gb|EFI53486.1| Uroporphyrinogen III synthase HEM4 [Afipia sp. 1NLS2]
Length = 250
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 95/241 (39%), Gaps = 16/241 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP T +++ GY ++ P F + Y A+ +TS+ +L
Sbjct: 1 MAILVMRPFPDNEATAAALREAGYGVLLSPALRFEPIA--IRDEPDAHYNAVIVTSANAL 58
Query: 61 STLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ R T +FA+G+A+A AR GF + +++ L +++
Sbjct: 59 RGIVGQPLLERLRDTKVFAVGDATAEAARAFGFRDVESASGDAVALCELVE---ARLRGS 115
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYA 174
+ YL G + L + + Y + + ++ + +A+L Y+
Sbjct: 116 GQICYLAGADLSRDLGTDLGTRGYNVTTLTTYRMTPLVHFSEAVEAAFGAGDVEAVLHYS 175
Query: 175 RSSVLYFFSLPLPAKISAAFL-----CLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
R S F A + + L C+S+ +A+ + + + V A P E ++ + L
Sbjct: 176 RRSAQSFVGAVKAAGLEISALALPQCCISDVVAAVLREAGASRVLAAASPDENAIFETLY 235
Query: 230 L 230
Sbjct: 236 R 236
>gi|297529192|ref|YP_003670467.1| uroporphyrinogen III synthase HEM4 [Geobacillus sp. C56-T3]
gi|297252444|gb|ADI25890.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. C56-T3]
Length = 255
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 67/237 (28%), Gaps = 10/237 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA---MQQSYGAIAITSSES 59
+++TR ++A K++ +G +PV +PL + Y + TS+ +
Sbjct: 11 VLVTRGKEQAASFSAKLRAVGAVPVEIPLIAIRPAAPEEIASMVERLGEYRWLVFTSANA 70
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV-EQKVLFTPQKP 118
+ + P+ + A + A+ +
Sbjct: 71 VRFFFPHVSLPRPLPEMAVVGRKTAAALAEHGLSPALVPDDYTAERLADLLMPRVKQGDR 130
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLLQNADAILFYARS 176
++++ G + L + + Y ++ + DA+ + S
Sbjct: 131 VLFVKGNLARPTLPEALRNAGAAVDELTVYETEPDESGRERLLSLLRRRELDAVTLMSPS 190
Query: 177 SVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+V L A C+ A + V ++K +
Sbjct: 191 TVDSLVRLLDKEADVLLSGVAVACIGPVTKEAAERAGIPVHICPTDYTTDGIIKAME 247
>gi|152978039|ref|YP_001343668.1| uroporphyrinogen III synthase HEM4 [Actinobacillus succinogenes
130Z]
gi|150839762|gb|ABR73733.1| Uroporphyrinogen III synthase HEM4 [Actinobacillus succinogenes
130Z]
Length = 249
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 79/249 (31%), Gaps = 18/249 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M +++TRP + + E + K G + MPL RE L ++ + S
Sbjct: 1 MAVLVTRPDSRGEQLTEALNKAGVAALHMPLFSISAGRELNELPNKMYQLKAGDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R I+ S+ + Q H N ++ +
Sbjct: 61 KNAVEFAAETLSNTGFRWRQDLIYFAVGQSSAEYFCEQSEQPVHYPYGHENSEGLLALPQ 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K ++ L G F + + +I+CY + Y +L Q A
Sbjct: 121 MQRLTDKTVLILRGNGGRELFPAQAVRRGAQVEIIECYRRVPVEYDPKKQTDLCQRAGIN 180
Query: 170 -ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKN--VVTVACFPKET 222
I+ + + + + S +A + + + +A
Sbjct: 181 TIIATSSEILTRLTNFVPAEERDWLTQCRLVTASYRVAKSAERAGWQKRQILIAPRADNA 240
Query: 223 SLLKLLPLR 231
+L+K+L +
Sbjct: 241 TLVKMLAEK 249
>gi|145300737|ref|YP_001143578.1| uroporphyrinogen-III synthase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853509|gb|ABO91830.1| uroporphyrinogen-III synthase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 244
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 67/239 (28%), Gaps = 10/239 (4%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSESLST 62
++ RP +A + +++ G+ P+ PL E L + + S ++
Sbjct: 4 LVVRPAAQAAELVQLLRQHGHAPLCCPLLETAAGSELPRLPELLPQADIVIAVSVHAVHF 63
Query: 63 LPANFCRHTPIFAIGEASA---CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + + A A I + ++ + K +
Sbjct: 64 THHFLLQTGQTWPSIDYFAVGQASADAFADVGIEASCPDDPRSEGLLALPALQQVSGKRV 123
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSS 177
+ L G L + Y T+ Q D++L +
Sbjct: 124 LILRGNGGRDLIARTLASRGALVHYCAAYERHYPELDGDTLTRHWQAAGLDSLLITSGEL 183
Query: 178 VLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ L P + S +A + +T+A +L L LR+
Sbjct: 184 LQRLLELVPGQQQPWLYDRLLVVPSPRVADMAKMAGFTHITIAQGASNQALTAALELRK 242
>gi|319427907|gb|ADV55981.1| Uroporphyrinogen III synthase HEM4 [Shewanella putrefaciens 200]
Length = 246
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 67/246 (27%), Gaps = 16/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSE 58
M +++TRP + + + G + PL + + I S+
Sbjct: 1 MKVLLTRPEGRNQSMVDALNARGIAHYVTPLLGVEPTNDITTDASHPLAGTDIIICISAN 60
Query: 59 SLSTLPANFCRHTPIFAIGE--------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + A + A + D+ ++
Sbjct: 61 AVIFANKALNKINAQIATWPKVQYFAVGHATWEALDQLGICAVEAPDDCQQTEGLLTLAS 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ P K + + G + L +R + Y + Q+
Sbjct: 121 LQHIPAKKVTIIRGVGGREALAEQLTSRGANVRYWEVYQRVCPPLDGYAITQQWQHFGID 180
Query: 170 -ILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + L S + SN + + A N VT AC ++
Sbjct: 181 TIVVTSGEVLNNLIKLVPKELFAWLRSCHIIVPSNRVEAQAHAFGINHVTNACAANSKAV 240
Query: 225 LKLLPL 230
L L L
Sbjct: 241 LNALKL 246
>gi|304414149|ref|ZP_07395517.1| uroporphyrinogen III synthase [Candidatus Regiella insecticola
LSR1]
gi|304283363|gb|EFL91759.1| uroporphyrinogen III synthase [Candidatus Regiella insecticola
LSR1]
Length = 275
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/239 (11%), Positives = 70/239 (29%), Gaps = 16/239 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSSE 58
I++TRP + +++ +G + PL F E L ++ + I S
Sbjct: 9 ILVTRPSPTGEQLMNRLRALGLVAYHAPLIRFSAGSELTKLPGLLQTMRAGDLVFILSQN 68
Query: 59 SLSTLPANFCRHTPIFAIGEASAC-----LARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + + ++ + + + + +++ +
Sbjct: 69 VIRYVNPLLHSNKRLWPSELLYYAIGRHTASVFQAVSHLPVTYPTIATSEELLTMTDLQQ 128
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--IL 171
K + L G L++ + +CY I Y N + ++
Sbjct: 129 LSSKKALLLRGNGGRELLGKTLMQRGAEVSYCECYRRNPIHYNANQQINDWRRLGINTLV 188
Query: 172 FYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ + L P + + +S +A + + VA +L+
Sbjct: 189 VTSGEMLQQLHILVSPDFCSFWLLDCRMIVVSERLALLAKQLGWHDIQVAKNADNDALI 247
>gi|77164031|ref|YP_342556.1| uroporphyrinogen III synthase HEM4 [Nitrosococcus oceani ATCC
19707]
gi|254436169|ref|ZP_05049676.1| uroporphyrinogen-III synthase [Nitrosococcus oceani AFC27]
gi|76882345|gb|ABA57026.1| uroporphyrinogen-III synthase [Nitrosococcus oceani ATCC 19707]
gi|207089280|gb|EDZ66552.1| uroporphyrinogen-III synthase [Nitrosococcus oceani AFC27]
Length = 265
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 23/244 (9%), Positives = 69/244 (28%), Gaps = 18/244 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYF----IHDRESVFLAMQQSYGAIAITSS 57
+++TRP ++A + + I+ G V P + + + S+
Sbjct: 16 RVLVTRPAEQAEKLSQAIELEGGQAVRFPTVEIGDSEVPAVVEEIIGRLDDFHWAVFVSA 75
Query: 58 ESLS------TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ + I +G A+A G N ++ ++
Sbjct: 76 NAVQRGVPWVFARREMPANLKIAVVGRATAQALGNFGLYPRLCPSYGY-NSEALLAMDEL 134
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ-DIAYPETTMKN--LLQNAD 168
+ ++ L + + + Y ++ + D
Sbjct: 135 QDMKGQQVVLFRASGGRELLAKTLTKRGAKVEYAEVYRRCLPSPSVAANLRQVLVNVPVD 194
Query: 169 AILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++ +++ + L + + + + + VA P + +L
Sbjct: 195 VVITTSKAVLENLCHLAGEPLLEKLRRTPLVVIGSRQVQQARELGFTQIWVAQEPSDAAL 254
Query: 225 LKLL 228
++ +
Sbjct: 255 VQTI 258
>gi|325841163|ref|ZP_08167288.1| uroporphyrinogen-III C-methyltransferase [Turicibacter sp. HGF1]
gi|325490020|gb|EGC92366.1| uroporphyrinogen-III C-methyltransferase [Turicibacter sp. HGF1]
Length = 502
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 81/246 (32%), Gaps = 22/246 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSS 57
+++TR ++ EK+ +G P+ +P +++V L Q Y + ++S
Sbjct: 256 NVMVTRSRTQSSSLVEKVMDLGGNPIEVPTIRIEKIKDNVELEQAIKEIQDYTYLILSSQ 315
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ H + AIG A+A + +G + E
Sbjct: 316 NAVDIFFDQLDELGFDARALAHLKVCAIGSATAKAVKDRGIKADLIPSKFVS--EALCEE 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ + P+ ++ K + L + + + Y S + + LL N
Sbjct: 374 LRDVLKPEDRVLIPRAKNARDVLVETLGQI-CSVHEVHTYESVMDTSMKEDVTELLTNHQ 432
Query: 169 A--ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ F + ++V F + + + + + + V A
Sbjct: 433 VDYVTFASSATVKNFVKMLGTDYLEKLNQTKVISIGPVTSKTLQDLKIEVYKEAKEASID 492
Query: 223 SLLKLL 228
+L++ +
Sbjct: 493 ALVEAM 498
>gi|293374465|ref|ZP_06620787.1| uroporphyrinogen-III C-methyltransferase [Turicibacter sanguinis
PC909]
gi|292646844|gb|EFF64832.1| uroporphyrinogen-III C-methyltransferase [Turicibacter sanguinis
PC909]
Length = 502
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 81/246 (32%), Gaps = 22/246 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSS 57
+++TR ++ EK+ +G P+ +P +++V L Q Y + ++S
Sbjct: 256 NVMVTRSRTQSSSLVEKVMDLGGNPIEVPTIRIEKIKDNVELEQAIKEIQDYTYLILSSQ 315
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ H + AIG A+A + +G + E
Sbjct: 316 NAVDIFFDQLDELGFDARALAHLKVCAIGSATAKAVKDRGIKADLIPSKFVS--EALCEE 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ + P+ ++ K + L + + + Y S + + LL N
Sbjct: 374 LRDVLKPEDRVLIPRAKNARDVLVETLGQI-CSVHEVHTYESVMDTSMKEDVTELLTNHQ 432
Query: 169 A--ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ F + ++V F + + + + + + V A
Sbjct: 433 VDYVTFASSATVKNFVKMLGTDYLEKLNQTKVISIGPVTSKTLQDLKIEVYKEAKEASID 492
Query: 223 SLLKLL 228
+L++ +
Sbjct: 493 ALVEAM 498
>gi|153813575|ref|ZP_01966243.1| hypothetical protein RUMOBE_03997 [Ruminococcus obeum ATCC 29174]
gi|149830320|gb|EDM85412.1| hypothetical protein RUMOBE_03997 [Ruminococcus obeum ATCC 29174]
Length = 500
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 72/248 (29%), Gaps = 21/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
+++TRP ++ RT E++++ G + +P + + SY I TS
Sbjct: 255 KVLVTRPKGRSSRTAEELRRRGAEVLELPSIRTVPLEDQSTLVHAFEEISSYQWIVFTSP 314
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV------ 111
+ + + A ++ L +I E
Sbjct: 315 TGVEIFFDELKKAHK---DIRSLAGAQIAAIGQGTAKVLEDRGILVDLIPEVYDGESLGE 371
Query: 112 ----LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ ++ + N L E + I Y + + +++
Sbjct: 372 ALAVKLQGGEKILLPRARRGNQKLVKILKEQGGQVSDIPTYDTVYEKSSLIHIDREIESD 431
Query: 168 DA--ILFYARSSVLYFFSLPL-PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++F + S+V F C+ +A ++ SL
Sbjct: 432 SIDCVVFTSASTVKGFVESTGLLDYSKVTAACIGKQTKAAADDYGMQ-TYMSEKATIDSL 490
Query: 225 LKLLPLRR 232
++L+ +
Sbjct: 491 VELVVKIK 498
>gi|313835631|gb|EFS73345.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL037PA2]
gi|314970333|gb|EFT14431.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL037PA3]
Length = 571
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 63/239 (26%), Gaps = 19/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I+I R + ++Q G + +P R + Y + T
Sbjct: 293 NILIPRTRDHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFT 352
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + + I AI +++ + G LA
Sbjct: 353 SANAVHAVSEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDLVPAGEQSTRALAA 412
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L E + + Y + A P + +
Sbjct: 413 VFPAFDEALDPINRVFVPRADIATESLSADLSELGWEVEDVVGYRTVRAAPPPAETREAI 472
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ DA++F + ++V + + A V +A P
Sbjct: 473 KTGKFDAVVFTSSTTVRNLVGIAGKPHKHTVVAAIGMRTAETCREHGLTVDVIAPEPTA 531
>gi|167746819|ref|ZP_02418946.1| hypothetical protein ANACAC_01531 [Anaerostipes caccae DSM 14662]
gi|167653779|gb|EDR97908.1| hypothetical protein ANACAC_01531 [Anaerostipes caccae DSM 14662]
Length = 504
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 72/246 (29%), Gaps = 16/246 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TRP + +T + G + MP R+ S+ L SY I TS
Sbjct: 255 RILLTRPKELIKKTAAMFRDQGAEVLEMPSISIEPVRDQRKLSMALEKINSYDWIVFTSV 314
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ-------IFHGKDNSINLAKIIVEQK 110
+ + + G + +
Sbjct: 315 NGVRIFFEEMKHQKKDIRSLGSCRIASIGAGTKNALEERGLFCDLVPEHYDGVSLAGTLA 374
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEH-KIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
T + ++ N L + I I Y +Q + +K +++
Sbjct: 375 DRLTGTEHILIPRAASGNQEMIRILHKKPGIQTDDIGIYDTQYENWQLVPVKEMIESGEI 434
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D +F + S+V F + I C+ A A V +A SL++
Sbjct: 435 DWTVFTSASTVRGFAAAVADTCIKGMKAACIGEQTARAAEEVGMK-VYIAEQASAESLVR 493
Query: 227 LLPLRR 232
L+ +
Sbjct: 494 LVSEHQ 499
>gi|209526129|ref|ZP_03274660.1| uroporphyrin-III C-methyltransferase [Arthrospira maxima CS-328]
gi|209493385|gb|EDZ93709.1| uroporphyrin-III C-methyltransferase [Arthrospira maxima CS-328]
Length = 511
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 68/250 (27%), Gaps = 24/250 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ-------QSYGAIAIT 55
I++TR +++ + +++ G + MP L + + + +T
Sbjct: 258 ILVTRSSEQSNEFRSLLEQKGAEVLEMPTLIITPPSTWEPLDKAIAFYDTSKPFDWLLLT 317
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQI------FHGKDNSINLAKIIVEQ 109
S+ ++S I + K + +A +VE
Sbjct: 318 SANAVSFFCERLMASGKDTRILANTKIAVVGKKTAMVLRKWGLNPDFIPPDFIADSLVEN 377
Query: 110 KVLFTPQKPLIYLGGKP-RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-- 166
K L++ + L + + + Y S + ++ L+N
Sbjct: 378 FPESVSGKRLLFPRVETGGREILVKELTQAGAEVVEVPAYESACPDTIDPNIQLALENGT 437
Query: 167 ADAILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
D F + +V F L A + + V A
Sbjct: 438 IDIATFTSSKTVKNFCKLLEGFAGDSWRDLLTGVAIASIGPQTSQTCQTLLGKVDIEAQE 497
Query: 219 PKETSLLKLL 228
L + +
Sbjct: 498 YTLEGLTQAI 507
>gi|327188882|gb|EGE56074.1| uroporphyrinogen-III synthase protein [Rhizobium etli CNPAF512]
Length = 264
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 17/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A +T +++++MG+ P+++PL HD + A+ + GAIA+TS E++
Sbjct: 30 MRVLVTRPAHSAEKTAQRLREMGHEPLLLPLRRPEHDGAAAAGALSATRGAIAVTSGEAV 89
Query: 61 STLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L A PIFA+GE +A AR+ GF + N +LA ++ Q V
Sbjct: 90 RVLSALGETLRPHLDRPIFAVGEVTAQAARRLGFRSVTASSGNGRDLADLVSAQSVED-- 147
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFY 173
L+YL G+PR FE L E I V +CY +A + + A+LFY
Sbjct: 148 ---LLYLAGRPRAETFEGRLRELGIHFSVAECYRMLPVAPGPAEIAAIFSGHHPDAVLFY 204
Query: 174 ARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R + FF + + LCLS +A AIP K VT++ P E SLL LL
Sbjct: 205 SRQTAEDFFQVAELRSALSEQGGVRLLCLSEAVAEAIPTLLKETVTISSMPDEISLLSLL 264
>gi|325661928|ref|ZP_08150548.1| hypothetical protein HMPREF0490_01286 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471780|gb|EGC74998.1| hypothetical protein HMPREF0490_01286 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 508
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 75/249 (30%), Gaps = 22/249 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITS 56
M I++TRP +++ R +++ G + P + + E+ L Q Y I TS
Sbjct: 261 MKIMVTRPKEQSSRLAGMLREEGAEVLEAPAIRIVPEVENERVSQVLFHIQKYQWIVFTS 320
Query: 57 SESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ ++ I IG +A G + + +
Sbjct: 321 PTGVEVFWNALRQYRVDVRSLSHLRIAVIGSGTARALEAHGMYADLMPEIYD---GEHLG 377
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPL-RVIDCYYSQDIAYPETTMKNLLQ- 165
+ ++ K N + + + + Y + AY + +
Sbjct: 378 AALGEVLSDEHILIPRAKIGNPELIREIKKRSEAVIEDLPIYDTHYEAYGFINYQEEFEQ 437
Query: 166 -NADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D ++F + S+V F LC+ + +A P +
Sbjct: 438 GKTDYVMFTSASTVRGFAQAAKGLDFSKVQALCIGKQTKAEADHYGMQ-TFMAEQPTLEA 496
Query: 224 LLKLLPLRR 232
++ L R
Sbjct: 497 MV-ALAKER 504
>gi|314928651|gb|EFS92482.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL044PA1]
gi|328908115|gb|EGG27874.1| uroporphyrinogen-III synthase, HemD [Propionibacterium sp. P08]
Length = 571
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 63/239 (26%), Gaps = 19/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I+I R + ++Q G + +P R + Y + T
Sbjct: 293 NILIPRTRDHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFT 352
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + + I AI +++ + G LA
Sbjct: 353 SANAVHAVSEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDLVPAGEQSTRALAA 412
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L E + + Y + A P + +
Sbjct: 413 VFPAFDEALDPINRVFVPRADIATESLSADLSELGWEVEDVVGYRTVRAAPPPAETREAI 472
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ DA++F + ++V + + A V +A P
Sbjct: 473 KTGKFDAVVFTSSTTVRNLVGIAGKPHKHTVVAAIGMRTAETCREHGLTVDVIAPEPTA 531
>gi|300714796|ref|YP_003739599.1| uroporphyrinogen III synthase [Erwinia billingiae Eb661]
gi|299060632|emb|CAX57739.1| Uroporphyrinogen III synthase [Erwinia billingiae Eb661]
Length = 248
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 72/246 (29%), Gaps = 17/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M I++TRP A +++ G + MPL F + L + + I S
Sbjct: 1 MTILVTRPSPAADELVSRLRTQGRVAWAMPLIEFTPGIDLDSLPGHLATLRPDDLVFILS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ R + + LA +I
Sbjct: 61 QQAIHYAQPALMRAKASWPASLNYYAIGRTTALALHAASGLDVVWPHERETSEILIQLPA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLLQNAD 168
+ K + L G + L ++ ++CY Y + + D
Sbjct: 121 LQQVAGKRALILRGNGGRELLAETLQARGATVQFVECYQRCAKIYQGAIEGRRWRDRQID 180
Query: 169 AILFYARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + + L + + +S+ +A+ + VA +
Sbjct: 181 TLVVTSGEMLQQLYLLFPEIDREEWLLHCRLVVVSDRLATRARELGWREIRVADGADNDA 240
Query: 224 LLKLLP 229
LL+ L
Sbjct: 241 LLRALQ 246
>gi|156972663|ref|YP_001443570.1| uroporphyrinogen-III synthase [Vibrio harveyi ATCC BAA-1116]
gi|156524257|gb|ABU69343.1| hypothetical protein VIBHAR_00315 [Vibrio harveyi ATCC BAA-1116]
Length = 242
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 71/241 (29%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-DRESVFLAMQQSYGAIAITSSES 59
M +++TRP ++ +++ G + PL + ++ ++ I S +
Sbjct: 1 MAVLVTRPGEQGAALCSLLERHGKTAIHHPLIDIVADLSDTQLSKYIETAQIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ H ++ TQ + ++ ++
Sbjct: 61 VQCAEQILQNHAKSWSKQAVYLAVGQKTAHYLSKCTQQKVHYPQVSDSEHLLQLPELNNV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
++ ++ L G +D L+ + + Y + I + + +L + I+
Sbjct: 121 EKQTVLILRGNGGRELIKDALVRRGAKVHYSETYKREFIPFDPVSCVSLWKTQQIDQIIV 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y S +++ S IA V LL L
Sbjct: 181 TSGEQLDYLCSQLTSEQLTWLNQQELYIPSQRIADIAIQRGFTQVRCTGSASNQELLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|78189474|ref|YP_379812.1| uroporphyrinogen-III synthase [Chlorobium chlorochromatii CaD3]
gi|78171673|gb|ABB28769.1| uroporphyrinogen-III synthase [Chlorobium chlorochromatii CaD3]
Length = 247
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 71/243 (29%), Gaps = 15/243 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP +A E++ G + V+ P + M Q + + TS S
Sbjct: 1 MKSVLVTRPKDQAASFVEQLAAYGLLSVVFPTIEIKPVGGWLVPTMAQ-FDGVFFTSPNS 59
Query: 60 LSTLPANFCRHTP--------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ A + P + A + ++ E
Sbjct: 60 VHAFMAQLLQEAPQELAALQRLKVWAVGKTTSADLAAHGVTTQPVPKIADAVTLMEEIGD 119
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQ--NAD 168
K ++L G D + + + Y + +K +LQ D
Sbjct: 120 EAINNKSFLFLRGSLSLGVIPDVISKRGGRCIELTVYENVPPPLEASAEVKAMLQDGKLD 179
Query: 169 AILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F + S+ + FF I + A A+ V + + S K
Sbjct: 180 CLSFTSPSTAINFFEAIGTTAIPDGVKVAAIGTTTAKALEKLGVRVDIIPEYFDGPSFAK 239
Query: 227 LLP 229
+
Sbjct: 240 AIA 242
>gi|86605246|ref|YP_474009.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Synechococcus sp. JA-3-3Ab]
gi|86553788|gb|ABC98746.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Synechococcus sp. JA-3-3Ab]
Length = 500
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 69/248 (27%), Gaps = 24/248 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSE 58
+++TR ++ +E ++ G + MP +A + + + +TS+
Sbjct: 250 VLVTRAEGQSPAFRELLRAQGARVLEMPALVIQPPSSWDPLDAAIANLEKFDWLLLTSAN 309
Query: 59 SLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + + +G +A Q G ++
Sbjct: 310 GVQAFFERLQQQGRDSRALHSLQVAVVGAKTAAALAQYGIRPDLMPSAFVA--EALLPIW 367
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNA 167
Q+ L L + + + Y S A + + L +
Sbjct: 368 PEPVQGQRILFPRVESGGREELVQGLRQRGAEVVEVAAYQSTCPAAADPQVLEALKTRQV 427
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-------AAFLCLSNNIASAIPASYKNVVTVACFPK 220
D + F + +V +F L A + + A+ V VA
Sbjct: 428 DILTFASSKTVQHFAHLLRQAGLGPEVWDPPVQIAAIGPKTAATCRQILGRVDVVAQEYT 487
Query: 221 ETSLLKLL 228
L+ L
Sbjct: 488 LEGLVGSL 495
>gi|254490191|ref|ZP_05103381.1| uroporphyrinogen-III synthase [Methylophaga thiooxidans DMS010]
gi|224464538|gb|EEF80797.1| uroporphyrinogen-III synthase [Methylophaga thiooxydans DMS010]
Length = 250
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/240 (14%), Positives = 87/240 (36%), Gaps = 12/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITSSE 58
I+ITRP +++ + E I++ G P++ P+ S + + S
Sbjct: 11 KILITRPRQQSDQLAELIEQAGGKPILFPVIAINPLLPSDWQQPAFKLDHANWLIFVSRN 70
Query: 59 SLSTLPANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + + + +H A+G +A R+ G + + +++ ++
Sbjct: 71 AVLSFMSGWQTELPKHLKFAAVGGGTAQAMRESGLKVDCQPEIS-SGSEGLLMMPEMQDV 129
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
+I + G H D L + ++ Y +A + AD ++ +
Sbjct: 130 ADCKIIIIRGVGGREHLADTLASRGASISYMEVYRRD-VAVQDKVSIERAMAADKLICTS 188
Query: 175 RSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ + + ++ + +SN I + + + V V+ + ++L+ L
Sbjct: 189 VAGIDNVCQILSDDMTNLLNKPLVVVSNRIKAHAESKGFSCVRVSTDASDVAMLQTLIRM 248
>gi|261418340|ref|YP_003252022.1| uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y412MC61]
gi|319767701|ref|YP_004133202.1| uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y412MC52]
gi|261374797|gb|ACX77540.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y412MC61]
gi|317112567|gb|ADU95059.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y412MC52]
Length = 255
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 67/237 (28%), Gaps = 10/237 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA---MQQSYGAIAITSSES 59
+++TR ++A K++ +G +PV +PL + Y + TS+ +
Sbjct: 11 VLVTRGKEQAASFSAKLRAVGAVPVEIPLIAIRPAAPEEIASMVEQLGEYRWLVFTSANA 70
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV-EQKVLFTPQKP 118
+ + P+ + A + A+ +
Sbjct: 71 VRFFFPHVSLPRPLPEMAVVGRKTAAALAEHGLSPALVPDDYTAERLADLLMPRVKQGDR 130
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLLQNADAILFYARS 176
++++ G + L + + Y ++ + DA+ + S
Sbjct: 131 VLFVKGNLARPTLPEALRNAGAAVDELTVYETKPDESGRERLLSLLRRRELDAVTLMSPS 190
Query: 177 SVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+V L A C+ A + V ++K +
Sbjct: 191 AVDSLVRLLDKEADVLLSGVAVACIGPVTKEAAERAGIPVHICPTDYTTDGIIKAME 247
>gi|145220051|ref|YP_001130760.1| uroporphyrinogen-III synthase [Prosthecochloris vibrioformis DSM
265]
gi|145206215|gb|ABP37258.1| uroporphyrinogen-III synthase [Chlorobium phaeovibrioides DSM 265]
Length = 246
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 63/243 (25%), Gaps = 15/243 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP +A ++++ G V+ P + + I TS S
Sbjct: 1 MKTVLVTRPKNQAGAFVSQLEEHGLGSVVFPTIEIKAVEGW-EVPDLSDFDGIFFTSPNS 59
Query: 60 LSTLP--------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+S + ++ E
Sbjct: 60 VSAFMARLLSTTPEQLENLQKATVWAVGKTTAGDLLTHGITTEPVPKIADAVTMMSEIGE 119
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQNAD-- 168
K ++L G D + + + Y ++ + +K +L
Sbjct: 120 ERIAGKNFLFLRGNLSLGVIPDVIGKRGGQCTELTVYENRPPSLEDTAAIKAMLAEGRLD 179
Query: 169 AILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F + S+ FF + + A A+ + + + +
Sbjct: 180 CLSFTSPSTATNFFEAMGTTGLPDGVKIAAIGTTTARALEKIGITTDIIPEYFDGPNFAR 239
Query: 227 LLP 229
+
Sbjct: 240 AIA 242
>gi|154245107|ref|YP_001416065.1| uroporphyrinogen III synthase HEM4 [Xanthobacter autotrophicus Py2]
gi|154159192|gb|ABS66408.1| Uroporphyrinogen III synthase HEM4 [Xanthobacter autotrophicus Py2]
Length = 232
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 91/239 (38%), Gaps = 18/239 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M+I++TRP A +T E+++ +G+ + P+ + + + A+A TS +
Sbjct: 1 MHILVTRPEPAASQTAERLRTLGHAVTVDPMLRIAPTAPT---LPEGPFDAVAFTSINGV 57
Query: 61 STLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ H P FA+G ++ AR GF + ++ LA I
Sbjct: 58 KAFAQHPQGPDFFHLPAFAVGPRTSKEARAIGFANVTDCDGDASALAGRIA---GALPAG 114
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LFYA 174
++ G+ R + L I L + Y +Q L + L +
Sbjct: 115 ARVLNPAGEDRAADLQALLAAPGISLELAIVYAAQPADALSEEAHAALASGTVTAALHLS 174
Query: 175 RSSVLYFFSLPLPAKISAAFL-----CLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +V + A ++ + CLS +A + + V VA P E +LL LL
Sbjct: 175 QRTVKTLLACVAAAGLNDRLIEVRQLCLSEQVAEPLVKAGLK-VEVATAPNEDALLALL 232
>gi|228999253|ref|ZP_04158833.1| Uroporphyrinogen III synthase HEM4 [Bacillus mycoides Rock3-17]
gi|228760450|gb|EEM09416.1| Uroporphyrinogen III synthase HEM4 [Bacillus mycoides Rock3-17]
Length = 252
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 77/242 (31%), Gaps = 17/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
++ITR +A + ++K G IP+ +PL + + F +Y + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKKQGGIPLEIPLLHIEGVSQQEFQGISQQLHTYDWVIFTSKNG 68
Query: 60 LSTL----PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+S I A+G + ++G+ F K ++E
Sbjct: 69 VSFFLDGLCQEIPPTVRIAAVGVKTGQELEKRGYEVHFVPKTFVA--EAFVLEFVRELNG 126
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFY 173
+ +++ G + L + + L Y ++ + + L+ D + F
Sbjct: 127 TERILFPKGNLARDIIPNKLRDLDVFLEDFVVYETKTNHEKQPDLIAALELGKVDVVTFT 186
Query: 174 ARSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V F L C+ V V +L++ +
Sbjct: 187 SPSTVTSFVKLLEGTNWREWTKKCTIACIGPITEQEARRY-FAGVIVPKEYTVEALIQCI 245
Query: 229 PL 230
Sbjct: 246 SK 247
>gi|229006800|ref|ZP_04164433.1| Uroporphyrinogen III synthase HEM4 [Bacillus mycoides Rock1-4]
gi|228754422|gb|EEM03834.1| Uroporphyrinogen III synthase HEM4 [Bacillus mycoides Rock1-4]
Length = 252
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 77/242 (31%), Gaps = 17/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
++ITR +A + ++K G IP+ +PL + + F +Y + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKKQGGIPLEIPLLHIEGVSQQEFQGISQQLHTYDWVIFTSKNG 68
Query: 60 LSTL----PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+S I A+G + ++G+ F K ++E
Sbjct: 69 VSFFLDGLCQEIPPTVRIAAVGVKTGQELEKRGYEVHFVPKTFVA--EAFVLEFVRELNG 126
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFY 173
+ +++ G + L + + L Y ++ + + L+ D + F
Sbjct: 127 TERILFPKGNLARDIIPNKLRDLDVFLEEFVVYETKTNHEKQPDLIAALELGKVDVVTFT 186
Query: 174 ARSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V F L C+ V V +L++ +
Sbjct: 187 SPSTVTSFVKLLEGTNWREWTKKCTIACIGPITEQEARRY-FAGVIVPKEYTVEALIQCI 245
Query: 229 PL 230
Sbjct: 246 SK 247
>gi|254784451|ref|YP_003071879.1| uroporphyrinogen-III synthase [Teredinibacter turnerae T7901]
gi|237684805|gb|ACR12069.1| uroporphyrinogen-III synthase [Teredinibacter turnerae T7901]
Length = 266
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 73/247 (29%), Gaps = 20/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-------LAMQQSYGAIAI 54
I+ +RP+ + K+Q GY + +PL +E + Y A+
Sbjct: 8 RILASRPLAQNSSWSSKLQAAGYRVLALPLLAIAQVQEPAQQQSIKNCILDFDHYDAVIF 67
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF--------HGKDNSINLAKII 106
S ++ ++ P G + + H ++N +++
Sbjct: 68 VSQNAVEATWQWLDQYWPQLPQGITYYAVGIKTAAQVQHFLGSEATVHAALTAMNTEELL 127
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ + ++ G D L + + Y A T + N
Sbjct: 128 ALPGLQQVAHQRILICRGLGGRPRLGDELENRGAAVTYCELYQRTLPAEAVTQFTDANLN 187
Query: 167 --ADAILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKE 221
D + ++ ++ + A A + +A+ + +A E
Sbjct: 188 PAQDVLCVFSGETLQNLLYVATTAGADLSAFALVVPGERVAALAAEQGFQQIQIARNAGE 247
Query: 222 TSLLKLL 228
++L +
Sbjct: 248 AAMLAAI 254
>gi|153835502|ref|ZP_01988169.1| uroporphyrinogen-III synthase [Vibrio harveyi HY01]
gi|148867928|gb|EDL67138.1| uroporphyrinogen-III synthase [Vibrio harveyi HY01]
Length = 242
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 71/241 (29%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-DRESVFLAMQQSYGAIAITSSES 59
M +++TRP ++ +++ G + PL + ++ ++ I S +
Sbjct: 1 MAVLVTRPGEQGAALCSLLERHGKTAIHHPLIDIVADLSDTQLSKYIETAQIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ H ++ TQ + ++ ++
Sbjct: 61 VQCAEQILQNHAKSWSKQAIYLAVGQKTAHYLSKCTQQKVHYPQVSDSEHLLQLPELNNV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
++ ++ L G +D L+ + + Y + I + + +L + I+
Sbjct: 121 EKQTVLILRGNGGRELIKDALVRRGAKVHYSETYKREFIPFDPVSCVSLWKTQQIDQIIV 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y S +++ S IA V LL L
Sbjct: 181 TSGEQLDYLCSQLTSEQLTWLNQQELYIPSQRIADIAIQRGFTQVRCTGSASNQELLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|212723866|ref|NP_001131566.1| hypothetical protein LOC100192907 [Zea mays]
gi|194691868|gb|ACF80018.1| unknown [Zea mays]
Length = 297
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 82/246 (33%), Gaps = 16/246 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
+V+TR K R ++K P+ +PL + ++ L + I +TS E+
Sbjct: 43 VVVTREQGKNARLISALEKHNVHPLELPLIKHVEGPDTDRLLDVLRNDKFDWIIVTSPEA 102
Query: 60 LSTLPANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK----IIVEQKV 111
+ + + +GE +A + + + + + E
Sbjct: 103 AAVFLQGWKAAGSPKVRVAVVGEGTARVFHEVSESDDQSLELAFSPSKALGKVLASELPR 162
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++Y ED L E + ++ Y + + + NL +A +
Sbjct: 163 SNRNSCKVLYPASAKAGHEIEDVLSERGFDVTRLNTYTTVPVEDVDPLTLNLAISAPVVA 222
Query: 172 FYARSSVLYFFSLP-LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S++ + +L + + C+ ASA + P S+L+
Sbjct: 223 LASPSALRAWLNLISKSDNWNNSVACIGETTASAAKKLGLKSIYYPTTPGLEGWVESILE 282
Query: 227 LLPLRR 232
L + R
Sbjct: 283 ALRVHR 288
>gi|71892350|ref|YP_278084.1| uroporphyrinogen-III synthase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796456|gb|AAZ41207.1| uroporphyrinogen III synthase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 249
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 73/247 (29%), Gaps = 17/247 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP + K+ G +PL YF +E L + + I S
Sbjct: 1 MNILITRPSPYGEQLVNKLLSFGKFAYHLPLIYFSTGKELCSLEQKLNLLSEGDFLCIIS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + + K + ++ +
Sbjct: 61 QHAIKYAHNQLLNMGISWPTKLAYYSIGHATSVMMYKLSGILVKYPTIQETSENLLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNAD 168
++++ K + L G +D L + + +CY Q Y + L N
Sbjct: 121 LMYSYGKRALILRGNNGRTILDDTLQRRGVFVASCECYTRQPFRYNREKQLSNLLGLNIR 180
Query: 169 AILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + + + L I + +S +A + +A
Sbjct: 181 TVVVTSGEILQHLYYLIPESYRTSWLIRCKLIVVSVRLAKLARRLGWTNIIIAQSANNEI 240
Query: 224 LLKLLPL 230
L LL
Sbjct: 241 LFHLLIK 247
>gi|153008311|ref|YP_001369526.1| uroporphyrinogen-III synthase [Ochrobactrum anthropi ATCC 49188]
gi|151560199|gb|ABS13697.1| Uroporphyrinogen III synthase HEM4 [Ochrobactrum anthropi ATCC
49188]
Length = 244
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 15/238 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP T K+ GY PV++PLS + F + A+ +TS+ +
Sbjct: 12 RVLVTRPQPAGSETAAKLASRGYEPVLLPLSRTVALS---FALPDGPFAALTVTSANAFH 68
Query: 62 TLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ + P+FA+G+ +A A++ GF + G +++ LA + Q
Sbjct: 69 HIDTERLKPFLGLPLFAVGQGTAQAAQKAGFGHVIDGGGDAVRLAATMRRD---LPEQSR 125
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARS 176
++YL G+ R FED + K+ + V D Y ++ I Y + ++N+L A++ Y+
Sbjct: 126 VLYLAGRVRQPVFEDEIQAAKLDMHVADVYDTETIPYSASALRNVLDGAPFVAVMLYSGV 185
Query: 177 SVLYFF----SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ F + P FLC+S +A +P+ ++ VA P E L +L
Sbjct: 186 AATSFVEAMHEIAPPFDEKTRFLCISARVADRLPSLWRANALVADHPDEGGLFRLFAK 243
>gi|322421443|ref|YP_004200666.1| uroporphyrin-III C-methyltransferase [Geobacter sp. M18]
gi|320127830|gb|ADW15390.1| uroporphyrin-III C-methyltransferase [Geobacter sp. M18]
Length = 512
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/248 (11%), Positives = 62/248 (25%), Gaps = 26/248 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
+++TR +A K++++G P L S+ TS
Sbjct: 262 VLVTRGADQAGEFTSKLEQLGARAYCCPTIEIAAPESYAALDEAIDALDSFHWTIFTSYN 321
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ A H + A+G +A G D ++
Sbjct: 322 AVKYFFARLAEHGLDSRALGRCRVCAVGPKTAAALEPYGIRPDLVPADYKA--EGVVAAF 379
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ K +++ G + L + Y + + L+
Sbjct: 380 TEMDMTGKWVLFPKGDRARELIPEELGRLGAQVIAPVAYANHTPSEIPAEALQALEEKRI 439
Query: 170 --ILFYARSSVLYFFSLPLPAK-----ISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ F + S+V + + + + +V
Sbjct: 440 DCVTFTSSSTVQNLADILGENRFLHLMEGVTVASIGPITSKTCRELGLDVHVEPTEYT-- 497
Query: 223 SLLKLLPL 230
L+ L
Sbjct: 498 --LEALAR 503
>gi|313793116|gb|EFS41183.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL110PA1]
gi|313802438|gb|EFS43660.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL110PA2]
gi|314964528|gb|EFT08628.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL082PA1]
gi|315078456|gb|EFT50487.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL053PA2]
gi|327457063|gb|EGF03718.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL092PA1]
Length = 571
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 64/239 (26%), Gaps = 19/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I+I R + ++Q G + +P R + Y + T
Sbjct: 293 NILIPRTRDHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFT 352
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + + I AI +++ + G F LA
Sbjct: 353 SANAVRAVSEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDFVPSGEQSTRALAA 412
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L E + + Y + A P + +
Sbjct: 413 VFPAFDEALDPINRVFVPRADIATESLSADLSELGWEVEDVVGYRTVRAAPPPAETREAI 472
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ DA++F + ++V + + A V +A P
Sbjct: 473 KTGKFDAVVFTSSTTVRNLVGIAGKPHKHTVVAAVGMRTAETCREHGLTVDVIAPEPTA 531
>gi|163848146|ref|YP_001636190.1| uroporphyrinogen III synthase HEM4 [Chloroflexus aurantiacus
J-10-fl]
gi|222526047|ref|YP_002570518.1| Uroporphyrinogen III synthase HEM4 [Chloroflexus sp. Y-400-fl]
gi|163669435|gb|ABY35801.1| Uroporphyrinogen III synthase HEM4 [Chloroflexus aurantiacus
J-10-fl]
gi|222449926|gb|ACM54192.1| Uroporphyrinogen III synthase HEM4 [Chloroflexus sp. Y-400-fl]
Length = 250
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/235 (14%), Positives = 82/235 (34%), Gaps = 10/235 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I ITRP + ++Q +G IP++ PL ++ + L +Y + +T
Sbjct: 8 RIAITRPAGRGDTLAARLQALGAIPLLTPLIAYMPPPDPAPLQQALNRLATGAYHWLVVT 67
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
S +++ L + A + ++ + + ++ + + +
Sbjct: 68 SRQTVQVLADTTIPESTAIAAVGKATASDCRRAWGREPTVVPDTEIGSAL--PAIMGQLA 125
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYA 174
K ++ + L + + Y + + + DAI+ +
Sbjct: 126 GKRVLLPCADIAPPTLTEALRAAGADVDRVTAYCTVAGPGLADLQRMIDDGAIDAIVLAS 185
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S+V L +P + +C+ + A+ + +A P + +L+ +L
Sbjct: 186 GSAVRQLQQLHVPTGLP-PLVCIGPSTAAVCADLGLPIAGIAERPNDDALIAVLE 239
>gi|254717953|ref|ZP_05179764.1| uroporphyrinogen-III synthase [Brucella sp. 83/13]
gi|265982896|ref|ZP_06095631.1| uroporphyrinogen-III synthase [Brucella sp. 83/13]
gi|306838959|ref|ZP_07471783.1| uroporphyrinogen-III synthase [Brucella sp. NF 2653]
gi|264661488|gb|EEZ31749.1| uroporphyrinogen-III synthase [Brucella sp. 83/13]
gi|306405962|gb|EFM62217.1| uroporphyrinogen-III synthase [Brucella sp. NF 2653]
Length = 235
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 15/235 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP A +T K++ GY PV++PLS + +V + + A+ ITS+ +
Sbjct: 3 RVLVTRPEPAAAQTAAKLRAAGYEPVLLPLSRTVALSFTV---PDEVFDALTITSANAFR 59
Query: 62 TLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ R P+FA+GE +A A++ GF + G +++ LA + + P
Sbjct: 60 HIAPERLLPYRTLPLFAVGEGTAKAAQEAGFKHVIEGGGDAVRLAGTMRQ---ALAPTAR 116
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYARS 176
++YL G+ R FED + + + + V D Y ++ + YP + +L + A++ Y+
Sbjct: 117 VLYLAGRVRQPVFEDEVAANGLSMTVCDVYDTESVMYPPQALSRILGHAPFVAVMLYSGV 176
Query: 177 SVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ F P FLC+S +A+ +P+ ++ V+ P E L +L
Sbjct: 177 AAASFVEAMRSITPPFDEKTRFLCISARVAAKLPSGWQQQALVSDHPDEKGLFRL 231
>gi|218439513|ref|YP_002377842.1| uroporphyrin-III C-methyltransferase [Cyanothece sp. PCC 7424]
gi|218172241|gb|ACK70974.1| uroporphyrin-III C-methyltransferase [Cyanothece sp. PCC 7424]
Length = 506
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 68/253 (26%), Gaps = 29/253 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+++TR +++ + + +Q+ G + MP +A + + +TS+
Sbjct: 249 VLVTRSAEQSSKFSDLLQQQGATVIEMPALEITPPSSWEKLDQAIANLGEFDWLILTSAN 308
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ I +G+ +A +Q+G + D + +I
Sbjct: 309 GVNYFFERLGDRGKDARSLAGVKIAVVGKKTAETLKQQGVLADYIPPDFVADS--LIDHF 366
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD- 168
+K L L + + Y S LQ
Sbjct: 367 PEELKGKKILFPRVETGGREVLVKELGGQGAKVIEVPAYQSGCPQQINPQAWQALQEKMI 426
Query: 169 -AILFYARSSVLYFFSLPLPA------------KISAAFLCLSNNIASAIPASYKNVVTV 215
I F + +V F+ L A + + + V
Sbjct: 427 DIITFASSKTVQNFYYLLQQALTSNSENSPQGLLEKVCIASIGPQTSKTCYEALGRVDIE 486
Query: 216 ACFPKETSLLKLL 228
A L L
Sbjct: 487 AQEYTLEGLTDAL 499
>gi|195625222|gb|ACG34441.1| uroporphyrinogen-III synthase [Zea mays]
Length = 297
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 82/246 (33%), Gaps = 16/246 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
+V+TR K R ++K P+ +PL + ++ L + I +TS E+
Sbjct: 43 VVVTREQGKNARLISALEKHNVHPLELPLIKHVEGPDTDRLSDVLRNDKFDWIIVTSPEA 102
Query: 60 LSTLPANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK----IIVEQKV 111
+ + + +GE +A + + + + + E
Sbjct: 103 AAVFLQGWKVAGSPKVRVAVVGEGTARVFHEVSESDDQSLELAFSPSKALGRVLASELPR 162
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++Y ED L E + ++ Y + + + NL +A +
Sbjct: 163 SNGNSCKVLYPASAKAGHEIEDVLSERGFDVTRLNTYTTVPVEDVDPLTLNLAISAPVVA 222
Query: 172 FYARSSVLYFFSLP-LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S++ + +L + + C+ ASA + P S+L+
Sbjct: 223 VASPSALRAWLNLISKSDNWNNSVACIGETTASAAKKQGLKSIYYPTTPGLEGWVESILE 282
Query: 227 LLPLRR 232
L + R
Sbjct: 283 ALRVHR 288
>gi|50841809|ref|YP_055036.1| uroporphyrinogen-III synthase, HemD [Propionibacterium acnes
KPA171202]
gi|289424633|ref|ZP_06426416.1| uroporphyrinogen-III synthase [Propionibacterium acnes SK187]
gi|289428955|ref|ZP_06430635.1| uroporphyrinogen-III synthase [Propionibacterium acnes J165]
gi|295129886|ref|YP_003580549.1| uroporphyrinogen-III synthase [Propionibacterium acnes SK137]
gi|50839411|gb|AAT82078.1| uroporphyrinogen-III synthase, HemD [Propionibacterium acnes
KPA171202]
gi|289155330|gb|EFD04012.1| uroporphyrinogen-III synthase [Propionibacterium acnes SK187]
gi|289157956|gb|EFD06179.1| uroporphyrinogen-III synthase [Propionibacterium acnes J165]
gi|291375631|gb|ADD99485.1| uroporphyrinogen-III synthase [Propionibacterium acnes SK137]
gi|313765590|gb|EFS36954.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL013PA1]
gi|313772861|gb|EFS38827.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL074PA1]
gi|313806451|gb|EFS44958.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL087PA2]
gi|313811000|gb|EFS48714.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL083PA1]
gi|313817318|gb|EFS55032.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL046PA2]
gi|313821934|gb|EFS59648.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL036PA1]
gi|313824170|gb|EFS61884.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL036PA2]
gi|313826538|gb|EFS64252.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL063PA1]
gi|313828718|gb|EFS66432.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL063PA2]
gi|313831766|gb|EFS69480.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL007PA1]
gi|313834691|gb|EFS72405.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL056PA1]
gi|313840080|gb|EFS77794.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL086PA1]
gi|314915771|gb|EFS79602.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL005PA4]
gi|314917043|gb|EFS80874.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL050PA1]
gi|314921319|gb|EFS85150.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL050PA3]
gi|314926655|gb|EFS90486.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL036PA3]
gi|314931019|gb|EFS94850.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL067PA1]
gi|314954966|gb|EFS99372.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL027PA1]
gi|314959007|gb|EFT03109.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL002PA1]
gi|314961044|gb|EFT05145.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL002PA2]
gi|314974694|gb|EFT18789.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL053PA1]
gi|314977110|gb|EFT21205.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL045PA1]
gi|314980377|gb|EFT24471.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL072PA2]
gi|314985792|gb|EFT29884.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL005PA1]
gi|314987314|gb|EFT31405.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL005PA2]
gi|314989143|gb|EFT33234.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL005PA3]
gi|315082079|gb|EFT54055.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL078PA1]
gi|315082778|gb|EFT54754.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL027PA2]
gi|315086137|gb|EFT58113.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL002PA3]
gi|315087721|gb|EFT59697.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL072PA1]
gi|315097525|gb|EFT69501.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL038PA1]
gi|315099977|gb|EFT71953.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL059PA2]
gi|315101710|gb|EFT73686.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL046PA1]
gi|315106383|gb|EFT78359.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL030PA1]
gi|315110169|gb|EFT82145.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL030PA2]
gi|327331389|gb|EGE73128.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Propionibacterium acnes HL096PA2]
gi|327333376|gb|EGE75096.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Propionibacterium acnes HL096PA3]
gi|327445607|gb|EGE92261.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL013PA2]
gi|327447229|gb|EGE93883.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL043PA1]
gi|327449738|gb|EGE96392.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL043PA2]
gi|327454588|gb|EGF01243.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL087PA3]
gi|327456660|gb|EGF03315.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL083PA2]
gi|328755643|gb|EGF69259.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL087PA1]
gi|328756423|gb|EGF70039.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL025PA2]
gi|328758846|gb|EGF72462.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL020PA1]
gi|328761850|gb|EGF75361.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Propionibacterium acnes HL099PA1]
gi|332674725|gb|AEE71541.1| porphyrin biosynthesis protein HemD [Propionibacterium acnes 266]
Length = 571
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 64/239 (26%), Gaps = 19/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I+I R + ++Q G + +P R + Y + T
Sbjct: 293 NILIPRTRDHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFT 352
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + + I AI +++ + G F LA
Sbjct: 353 SANAVRAVSEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDFVPSGEQSTRALAA 412
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L E + + Y + A P + +
Sbjct: 413 VFPAFDEALDPINRVFVPRADIATESLSADLSELGWEVEDVVGYRTVRAAPPPAETREAI 472
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ DA++F + ++V + + A V +A P
Sbjct: 473 KTGKFDAVVFTSSTTVRNLVGIAGKPHKHTVVAAVGMRTAETCREHGLTVDVIAPEPTA 531
>gi|312884197|ref|ZP_07743908.1| uroporphyrinogen-III synthase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368125|gb|EFP95666.1| uroporphyrinogen-III synthase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 246
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 74/240 (30%), Gaps = 11/240 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL-AMQQSYGAIAITSSES 59
M +++TRP ++ L + G +PL H++ L ++ I S +
Sbjct: 1 MAVLVTRPGEQGLDLCRALSNSGVQSYHLPLIEIQHEQRLDGLCEQMKTVDIILAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEASA----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
++ + F + + A +Q N + ++ ++
Sbjct: 61 VTAVDNYFEQQKEQWPAKVYFAIGQKTAHALSMASQQKVHCPNINDSEHLLALPQLNNIS 120
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFY 173
+ + L G L + ++ Y Q +A+ + + + + ++
Sbjct: 121 NQKALILRGNGGRELIYKTLTQRGASVQYHQVYRRQKLAFDADRLIPIWEKNNVSQLVVT 180
Query: 174 ARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
++ + +F S S IA +T ++LL L
Sbjct: 181 SKEQLEHFTSKMTLDQRKWLYQRHLYVPSERIAKLAYQLGFTAITTTFGASNSALLAALQ 240
>gi|258651163|ref|YP_003200319.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Nakamurella multipartita DSM 44233]
gi|258554388|gb|ACV77330.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)
methyltransferase [Nakamurella multipartita DSM 44233]
Length = 506
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 70/249 (28%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
++I + A E ++ G IP +P R + Y I T
Sbjct: 238 RVLIPQTKDPAEEMLELLRLHGAIPQRVPTVAVEPPRTPAQMERAVKGLVDGRYQWIVFT 297
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S S+ + F I + A+ R G D + L
Sbjct: 298 SINSVRAVWEKFVEFGLDARAFSGVRIACVDSATGDAVRALGIVPELISADQQSSAGLLS 357
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
E + P ++ + L E + + Y + A P ++ +
Sbjct: 358 TFPEYDDILDPVDRVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRAAPPAAPIREAI 417
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ DA+ F + S+V + + CL A V +
Sbjct: 418 KTGGFDAVCFTSSSTVRNLVGIAGKPHARSLVACLGPKTAETAREFGLRVDVQPEVAELG 477
Query: 223 SLLKLLPLR 231
+L++ L
Sbjct: 478 ALVEALAEH 486
>gi|157377266|ref|YP_001475866.1| uroporphyrinogen III synthase HEM4 [Shewanella sediminis HAW-EB3]
gi|157319640|gb|ABV38738.1| uroporphyrinogen III synthase HEM4 [Shewanella sediminis HAW-EB3]
Length = 244
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 71/242 (29%), Gaps = 12/242 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY---GAIAITSS 57
M +++TRP + E + + G V+ PL + + + + + S+
Sbjct: 1 MKVLLTRPQGRNQSMIEALNEKGVSHVVTPLLNVQATDIQLHQSSIEQFNQADIVIFIST 60
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFT---QIFHGKDNSINLAKIIVEQKVLFT 114
++ P A A Q ++ +++
Sbjct: 61 NAVKFASKALNNQFPDSAQFYAVGEATYQALLALGISSQKAPQECQQTEGLLTLEQLHHI 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ + G + L + + Y + ++ QNA+ I+
Sbjct: 121 SNKNIVIVRGVGGREALAEALTSRGAIVNYWEAYQRGCPQLDKNSVIQGWQNAEIDTIVV 180
Query: 173 YARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + L + + S+ + A+ VT A ++L L
Sbjct: 181 TSGEILNNLIKLVPKELFAWLRACHIIVPSSRVQEQALANGLQHVTNAKAANCKAVLSAL 240
Query: 229 PL 230
L
Sbjct: 241 KL 242
>gi|331084090|ref|ZP_08333197.1| hypothetical protein HMPREF0992_02121 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330402452|gb|EGG82022.1| hypothetical protein HMPREF0992_02121 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 507
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/249 (15%), Positives = 82/249 (32%), Gaps = 21/249 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+++TRP + A K++K+G + +P +E+ L Q+Y IA TS
Sbjct: 255 KVLVTRPKEAASSMAAKLRKLGAEVLELPAIKTAAKQENTALLNAFSHLQTYDWIAFTSP 314
Query: 58 ESLSTLPANFCR----------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + + L + F + + +L K++
Sbjct: 315 KGVKVFFEEMKKAKVDARKLGNAKFAVVGTGTQKALQEKGFFADVMPELFDGASLGKMLC 374
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS--QDIAYPETTMKNLLQ 165
E+ +K L+ E+ + I + I Y + + + +
Sbjct: 375 EKCS--GTEKILLPRAEIGSQEIIEELKKKAGIVIDDIGIYETLYEKSEIIDEKKEFEAG 432
Query: 166 NADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ D +F + S+V F C+ +A ++ SL
Sbjct: 433 SIDCAVFTSASTVKGFVEAVPELDYSRVKAACIGKQTKAAADKYSME-TYMSKEASIDSL 491
Query: 225 LKL-LPLRR 232
L+L + L++
Sbjct: 492 LELVIELKK 500
>gi|327334899|gb|EGE76610.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Propionibacterium acnes HL097PA1]
Length = 571
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 64/239 (26%), Gaps = 19/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I+I R + ++Q G + +P R + Y + T
Sbjct: 293 NILIPRTRDHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFT 352
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + + I AI +++ + G F LA
Sbjct: 353 SANAVRAVSEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDFVPSGEQSTRALAA 412
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + + E + + Y + A P + +
Sbjct: 413 VFPAFDEALDPINRVFVPRADIATESLSADISELGWEVEDVVGYRTVRAAPPPAETREAI 472
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ DA++F + ++V + + A V +A P
Sbjct: 473 KTGKFDAVVFTSSTTVRNLVGIAGKPHKHTVVAAVGMRTAETCREHGLTVDVIAPEPTA 531
>gi|269798481|ref|YP_003312381.1| uroporphyrin-III C-methyltransferase [Veillonella parvula DSM 2008]
gi|269095110|gb|ACZ25101.1| uroporphyrin-III C-methyltransferase [Veillonella parvula DSM 2008]
Length = 502
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 77/247 (31%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSE 58
+V+TR +A +EK+ G V + + + Y I TS E
Sbjct: 256 VVVTRARSQASAFREKLAAQGANVVEAAAIKTSPLELFEEDKRIINNTKEYQCIVFTSGE 315
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + ++ + AIG A+A ++ G D A +E+
Sbjct: 316 GVRYFFDALYKEGKDTRALGNSKVAAIGCATARELQKYGIVPDIIPVDYKAESAVEALEE 375
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
++ ++ + K L + + ++ Y + + + L N
Sbjct: 376 ELNAGD--SVLLIQPKVARDVIPRCLRHRDMNVDILRLYETTQDTSQQEALVTALTEGNV 433
Query: 168 DAILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D I F + S+V L + C+ A+ ++ ++
Sbjct: 434 DYITFTSSSTVTNTIQLLGDNALELLGKTKVACIGPITAATAMSAGLKPAIISDAYTTDG 493
Query: 224 LLKLLPL 230
L+ +
Sbjct: 494 LVNAIVK 500
>gi|85713685|ref|ZP_01044675.1| uroporphyrinogen III synthase [Nitrobacter sp. Nb-311A]
gi|85699589|gb|EAQ37456.1| uroporphyrinogen III synthase [Nitrobacter sp. Nb-311A]
Length = 248
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 98/241 (40%), Gaps = 15/241 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP T ++ MG ++ P+ F + +YGA+ +TS+ +L
Sbjct: 1 MAVLVTRPEPDNGTTAAALRAMGREALLSPVLRFEAVAFEID--QDANYGAVIVTSANAL 58
Query: 61 STLPANFCRHTP----IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE--QKVLFT 114
L + + +FA+G +A AR+ GF + ++ L ++I+E +
Sbjct: 59 RALAVHPGIESLLNLAVFAVGRHTAEAARRIGFQDVVAATGDAAALCELILEGVRAKRLI 118
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
++YL R+ L H + + CY +A + + + +L
Sbjct: 119 KGARILYLAAADRSCDLAGKLEGHGLIVVTTTCYRMAPVASLSREVCDAFASHRISAVLH 178
Query: 173 YARSSVLYFFSLPLPAKISAAFL-----CLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
Y+R S F + + L C+S +AS + + V A P E ++L+
Sbjct: 179 YSRRSARAFLDAVRIGGVEISALAVPQCCISGAVASILRDAGAPHVLEASVPAEQAVLEA 238
Query: 228 L 228
L
Sbjct: 239 L 239
>gi|260588742|ref|ZP_05854655.1| siroheme synthase [Blautia hansenii DSM 20583]
gi|260540924|gb|EEX21493.1| siroheme synthase [Blautia hansenii DSM 20583]
Length = 507
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/249 (15%), Positives = 82/249 (32%), Gaps = 21/249 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+++TRP + A K++K+G + +P +E+ L Q+Y IA TS
Sbjct: 255 KVLVTRPKEAASSMAAKLRKLGAEVLELPAIKTAAKQENTALLNAFSHLQTYDWIAFTSP 314
Query: 58 ESLSTLPANFCR----------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + + L + F + + +L K++
Sbjct: 315 KGVKVFFEEMKKAKVDARKLGNAKFAVVGTGTQKALQEKGFFADVMPELFDGASLGKMLC 374
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS--QDIAYPETTMKNLLQ 165
E+ +K L+ E+ + I + I Y + + + +
Sbjct: 375 EKCS--GTEKILLPRAEIGSQEIIEELKKKAGIVIDDIGIYETLYEKSEIIDEKKEFEAG 432
Query: 166 NADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ D +F + S+V F C+ +A ++ SL
Sbjct: 433 SIDCAVFTSASTVKGFVEAVPELDYSRVKAACIGKQTKAAADKYSME-TYMSKEASIDSL 491
Query: 225 LKL-LPLRR 232
L+L + L++
Sbjct: 492 LELVIELKK 500
>gi|313815303|gb|EFS53017.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL059PA1]
Length = 571
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 64/239 (26%), Gaps = 19/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I+I R + ++Q G + +P R + Y + T
Sbjct: 293 NILIPRTRDHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFT 352
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + + I AI +++ + G F LA
Sbjct: 353 SANAVRAVSEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDFVPSGEQSTRALAA 412
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L E + + Y + A P + +
Sbjct: 413 VFPAFDEALDPINRVFVPRADIATESLSADLSELGWEVEDVVGYRTVRAAPPPAETREAI 472
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ DA++F + ++V + + A V +A P
Sbjct: 473 KTGKFDAVVFTSSTTVRNLVGIAGKPHKHTVVAAVGMRTAETCREHGLTVDVIAPEPTA 531
>gi|313814495|gb|EFS52209.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL025PA1]
Length = 571
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 64/239 (26%), Gaps = 19/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I+I R + ++Q G + +P R + Y + T
Sbjct: 293 NILIPRTRDHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFT 352
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + + I AI +++ + G F LA
Sbjct: 353 SANAVRAVSEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDFVPSGEQSTRALAA 412
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L E + + Y + A P + +
Sbjct: 413 VFPAFDEALDPINRVFVPRADIATESLSADLSELGWEVEDVVGYRTVRAAPPPAETREAI 472
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ DA++F + ++V + + A V +A P
Sbjct: 473 KTGKFDAVVFTSSTTVRNLVGIAGKPHKHTVVAAVGMRTAETCREHGLTVDVIAPEPTA 531
>gi|295395609|ref|ZP_06805803.1| uroporphyrinogen-III synthase [Brevibacterium mcbrellneri ATCC
49030]
gi|294971628|gb|EFG47509.1| uroporphyrinogen-III synthase [Brevibacterium mcbrellneri ATCC
49030]
Length = 531
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 75/246 (30%), Gaps = 18/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAIT 55
++I R ++ T + + + G ++P R + + Y + T
Sbjct: 256 NVLIPRTREQGEITAQVLHEYGAESEVVPTIAIQPPRTPGQMERAMRGLVDGDYQWVGFT 315
Query: 56 SSESLST-------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
S ++ L + + + A + + S A+ +
Sbjct: 316 SINAVRAVRVLLGDLGLDVRSLAGVRVAAVGAQTAAALREWGIEPELVATSEESARGLAA 375
Query: 109 QKVLFTPQK---PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+F + ++ + L E + + Y + A P + ++
Sbjct: 376 DWPVFDDVEGFNRVLLPRADIATEVLVNGLQEKGWKVDDVTAYRTVRAAPPPAPTREAIK 435
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ DA+LF + S+V + + C+ A + V V+ S
Sbjct: 436 RGDFDAVLFTSSSTVRNLVGIAGKPPATTVVACIGPATAQTAESHGLVVDIVSQEANVKS 495
Query: 224 LLKLLP 229
L++ L
Sbjct: 496 LIEDLA 501
>gi|17230942|ref|NP_487490.1| uroporphyrinogen III methylase [Nostoc sp. PCC 7120]
gi|17132583|dbj|BAB75149.1| uroporphyrinogen III methylase [Nostoc sp. PCC 7120]
Length = 517
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 60/247 (24%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
I++TR ++ + +++ +G + MP L A + + +TS+
Sbjct: 264 ILVTRSSGQSSQFSDRLTTLGATVIEMPALEIGPPSSWKELDQAIANLSHFDWLILTSTN 323
Query: 59 SLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ ++ I +A +VE
Sbjct: 324 GVDYFFERLYIQGKDTRALAGLKIAVVGEKTSQSLKQRGIQADFIPPNFVADSLVEHFPE 383
Query: 113 FTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADA 169
K +++ L + + Y S + +
Sbjct: 384 SLLNKKILFPRVESGGREILVKELSAKGADVIEVAAYQSCCPTSIPLAAELALKNRTIHI 443
Query: 170 ILFYARSSVLYFFSL--------PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
I F + +V +F L A + + V A
Sbjct: 444 ITFASSKTVQFFCQLADKIFPHNIPNALEGICIASIGPQTSKTCHTLLGRVDIEAEEYTL 503
Query: 222 TSLLKLL 228
L + +
Sbjct: 504 DGLTQAI 510
>gi|115522094|ref|YP_779005.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
BisA53]
gi|115516041|gb|ABJ04025.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
BisA53]
Length = 248
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/243 (19%), Positives = 87/243 (35%), Gaps = 15/243 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP T ++ G+ ++ P+ F + +YG I +TS+ +L
Sbjct: 1 MAMLVTRPQPDNEATAASLRAKGFEVLLAPMLRFEPVAFAAD--PDAAYGGIIVTSANAL 58
Query: 61 STLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKII--VEQKVLFT 114
+ P+FA+G +A A + GF + ++ L I +
Sbjct: 59 RAIEGQAAVAQLLGLPLFAVGSRTAQAASEVGFKNVIVAGGDASALRDTIVAAARGRKLK 118
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILF 172
L+YL G L + Y + + + +A+L
Sbjct: 119 KSDTLLYLSGADIARDLPGELRALGFNIATQTAYKMISVPTLPGDVCDAFAANRVEAVLH 178
Query: 173 YARSSVLYFFSLPLPAKISAAFLCL-----SNNIASAIPASYKNVVTVACFPKETSLLKL 227
Y+ S F A I + L + S +A+ + + V VA P E +L ++
Sbjct: 179 YSGRSARSFLDAARAAGIEISALAIPQCCLSEAVAAVVHEAGAARVIVASQPNEAALFEV 238
Query: 228 LPL 230
L
Sbjct: 239 LDR 241
>gi|311031439|ref|ZP_07709529.1| Uroporphyrinogen-III synthase [Bacillus sp. m3-13]
Length = 248
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 64/231 (27%), Gaps = 10/231 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-----MQQSYGAIAITS 56
I+ITR ++A ++I +G + +PL F H +S + + I TS
Sbjct: 11 RILITRSKEQARYFSKQIAALGGTSLEVPLIQFQHVSDSEDVISDIEFNIADFEWIVFTS 70
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + P + + +I K
Sbjct: 71 VNGVKYFFELYQGPLPNKVAVVGVKTKQALESLGFNVDLVPKRFSAEDLIKSFKKE--KV 128
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ-DIAYPETTMKNLLQNADAILFYAR 175
++ + G + L ++ I Y + + + D F +
Sbjct: 129 SSIMLIQGNLARPLLREELSRIGYNVKQIVVYENVIRVPEEKEWKWVKEGKVDLYTFTSP 188
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F L + +A + +V LL+
Sbjct: 189 STVHNFLELFG--LPDGPVATIGPITRTAAEKAGIHVAISPSEYTMDGLLE 237
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKI---PLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
K ++ K + +F + + +I + D + ++ + + + I+F
Sbjct: 10 KRILITRSKEQARYFSKQIAALGGTSLEVPLIQFQHVSDSEDVISDIEFNIADFEWIVFT 69
Query: 174 ARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + V YFF L + + A+ + NV V L+K +
Sbjct: 70 SVNGVKYFFELYQGPLPN-KVAVVGVKTKQALESLGFNVDLVPKRFSAEDLIKSFKKEK 127
>gi|306844856|ref|ZP_07477439.1| uroporphyrinogen-III synthase [Brucella sp. BO1]
gi|306274788|gb|EFM56569.1| uroporphyrinogen-III synthase [Brucella sp. BO1]
Length = 235
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 15/235 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP A +T K++ GY PV++PLS + +V + + A+ ITS+ +
Sbjct: 3 RVLVTRPEPAAAQTAAKLRAAGYEPVLLPLSRTVALSFTV---PDEVFDALTITSANAFR 59
Query: 62 TLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ R P+FA+GE +A A++ GF + G +++ LA + + P
Sbjct: 60 HIAPERLLPYRTLPLFAVGEGTAKAAKEAGFKHVIEGGGDAVRLAGTMRQ---ALAPTAR 116
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYARS 176
++YL G+ R FED + + + + V D Y ++ + YP + +L + A++ Y+
Sbjct: 117 VLYLAGRVRQPVFEDEMAANGLSMMVCDVYDTESVTYPPQALSRILGHAPFVAVMLYSGV 176
Query: 177 SVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ F P FLC+S +A+ +P+ ++ V+ P E L +L
Sbjct: 177 TAASFAEAMRSITPPFDAKTRFLCISARVAAKLPSGWQQQALVSDHPDEKGLFRL 231
>gi|314969628|gb|EFT13726.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL037PA1]
Length = 571
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 64/239 (26%), Gaps = 19/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I+I R + ++Q G + +P R + Y + T
Sbjct: 293 NILIPRTRDHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFT 352
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + + I AI +++ + G F LA
Sbjct: 353 SANAVRAVSEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDFVPSGEQSTRALAA 412
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L E + + Y + A P + +
Sbjct: 413 VFPAFDEALDPINRVFVPRADIATESLSADLSELGWEVEDVVGYRTVRAAPPPAETREAI 472
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ DA++F + ++V + + A V +A P
Sbjct: 473 KTGKFDAVVFTSSTAVRNLVGIAGKPHKHTVVAAVGMRTAETCREHGLTVDVIAPEPTA 531
>gi|291546285|emb|CBL19393.1| uroporphyrinogen-III synthase /uroporphyrinogen-III
C-methyltransferase [Ruminococcus sp. SR1/5]
Length = 501
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 76/242 (31%), Gaps = 19/242 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
+++TRP + RT + +++ G + +P + + L + Y + TS
Sbjct: 255 KVLVTRPKELVSRTADMLREKGAEVLELPAIRTVPMEDQSRLYKALDHLEEYQWLVFTSP 314
Query: 58 ESLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ RH + IGE + +++G F + E
Sbjct: 315 TGVRVFFEELIRHGKDIRAMGNARLAVIGEGTKKALKERGLLADFVPSVYDGDTLG--KE 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS--QDIAYPETTMKNLLQN 166
L + + ++ + N +L + + + Y + + + +
Sbjct: 373 LSELLSGGEKILIPRAEKGNEKLTAFLAQAGAVVEDVPTYQTLYEKSQLIDEKKEFETGQ 432
Query: 167 ADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+F + S+V F C+ +A + ++ SL+
Sbjct: 433 ISCAVFTSASTVKGFVEGTKGLDYSKVKAACIGRQTKAAAESFGMKA-YMSEKATIDSLV 491
Query: 226 KL 227
KL
Sbjct: 492 KL 493
>gi|261250036|ref|ZP_05942613.1| uroporphyrinogen-III synthase [Vibrio orientalis CIP 102891]
gi|260939540|gb|EEX95525.1| uroporphyrinogen-III synthase [Vibrio orientalis CIP 102891]
Length = 247
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 75/241 (31%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-QQSYGAIAITSSES 59
M +++TRP K+ L +++ ++G PL + L S+ I S +
Sbjct: 1 MAVLVTRPGKQGLSLCQQLSEVGIASHHHPLIAIQSGDQLSGLEDHISSFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+S + + + + + + ++ + +
Sbjct: 61 VSETSQHLTQTCKSWPTNPIYLAVGQKTAHVLSKAVKQQVHYPDVSDSEHLLKLEALQHV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LF 172
K ++ L G D L + + + Y +++A+ + L Q+ +
Sbjct: 121 ANKKILILRGNGGRELIFDTLADRGAMVEYREVYKRENLAFRSDLLVPLWQDKQITQLVI 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + YF S + + S IA + VVT LL L
Sbjct: 181 TSSGQLEYFISQLSNVERNWLFTLHLYVPSERIAQNAREAGFKVVTNTLSASNPVLLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|319780788|ref|YP_004140264.1| uroporphyrinogen III synthase HEM4 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166676|gb|ADV10214.1| Uroporphyrinogen III synthase HEM4 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 238
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP A RT ++++ G+ PV++PL+ + L A+A+TS+ ++
Sbjct: 3 RVLVTRPEPGASRTAHRLEEAGFQPVLLPLTETKALPAAAGLIP-DDAVAVAVTSANAMR 61
Query: 62 TLPANFCRH---TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
P P A+G +A AR+ GF + G ++ LA ++ K
Sbjct: 62 HAPEEIIGTLAALPCHAVGRRTAEAARKAGFLSVSEGPGDAEALADVLA----ADFSGKT 117
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARS 176
++YL G+ R FE L + + ++ Y + + YP+ + L A+L Y+
Sbjct: 118 IVYLCGRVRFPAFEQRLGTAGVRVDAVETYDTLTVGYPDEVILKRLSGQPADAVLLYSAK 177
Query: 177 SVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ L + LS IA+A + + +A P E +LL LL
Sbjct: 178 AAAAMQMLARRPALRGLFEKTWVFALSARIAAAFDDATGERIRIAAQPDEEALLALLQAP 237
Query: 232 R 232
R
Sbjct: 238 R 238
>gi|254704901|ref|ZP_05166729.1| uroporphyrinogen-III synthase [Brucella suis bv. 3 str. 686]
gi|261755595|ref|ZP_05999304.1| uroporphyrinogen-III synthase [Brucella suis bv. 3 str. 686]
gi|261745348|gb|EEY33274.1| uroporphyrinogen-III synthase [Brucella suis bv. 3 str. 686]
Length = 235
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 15/235 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP A +T K++ GY PV++PLS + +V + + A+ ITS+ +
Sbjct: 3 RVLVTRPEPAAAQTAAKLRAAGYEPVLLPLSRTVALSFTV---PDEVFDALTITSANAFR 59
Query: 62 TLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ R P+FA+GE +A A++ GF + G +++ LA + + P
Sbjct: 60 HIAPERLLPYRTLPLFAVGEGTAKAAQEAGFKHVIEGGGDAVRLAGTMRQ---ALAPTAR 116
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYARS 176
++YL G+ R FED + + + + V D Y ++ + YP + +L + A++ Y+
Sbjct: 117 VLYLAGRVRQPVFEDEVAANGLSMMVCDVYDTESVMYPPQALSRILGHAPFVAVMLYSGV 176
Query: 177 SVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ F P FLC+S +A+ +P+++ V+ P E L +L
Sbjct: 177 AAASFVEAMRSITPPFDEKTRFLCISARVAAKLPSNWLQQALVSDHPDEKGLFRL 231
>gi|86148166|ref|ZP_01066464.1| uroporphyrinogen-III synthetase [Vibrio sp. MED222]
gi|85834013|gb|EAQ52173.1| uroporphyrinogen-III synthetase [Vibrio sp. MED222]
Length = 242
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 70/240 (29%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP + +++ G + PL + + S L+ + I S +
Sbjct: 1 MTVLVTRPGSEGQSLCQQLADEGIQAIHHPLIRIVDNPHSSDLSTQLNNSDIIIAVSHHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + + I+ ++ + ++ ++
Sbjct: 61 VTAAQNILSKTSSIWPTSPLYLGVGQKTAHVLSKVSKQKVNYPKVSDSEHLLKLTELNGV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ L G D L+ + + Y + I + N ++
Sbjct: 121 DNKSILILRGNGGRELIRDSLLNRGAKVSYCETYRREYIPISDHNTYQTWINKKTSKVVI 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ + Y S+ ++ S I + VT LL L
Sbjct: 181 TSQEQLEYLCSITPDEYLAWLSTRHLFVPSQRIVERAQQLGFSNVTNTHSATNQILLAAL 240
>gi|94969589|ref|YP_591637.1| uroporphyrinogen-III synthase [Candidatus Koribacter versatilis
Ellin345]
gi|94551639|gb|ABF41563.1| uroporphyrinogen-III synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 272
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 74/254 (29%), Gaps = 26/254 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
++++R K+A +++ G + +P + Y + +TS
Sbjct: 17 RVLVSRARKQAGALSVELKARGARVLEIPFIEIREPQSFAPMDTAIRSVLDYDWLILTSV 76
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ L + I AIG A+ + K +A+ +VE
Sbjct: 77 NGVNALFRRLEKLKLRPDLFEKLKIAAIGPATKKAIEGQRLKVEVTPK---EYVAEAVVE 133
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP----ETTMKNLL 164
K ++ + K + L + V++ Y + + +L
Sbjct: 134 ALARKVKGKRVLLVRAKVARDVIPNELRRAGANVDVVEAYETVVPEKSRGKLSDALHSLK 193
Query: 165 QNADAILFYARSSVLYFFSLPLP------AKISAAFLCLSNNIASAIPASYKNVVTVACF 218
I F + S+V F L + + ++ + V A
Sbjct: 194 NKPQVITFTSSSTVKNFVELIGKRAATKCFRDGVRSASIGPVTSATLREFNLPVNIQAEE 253
Query: 219 PKETSLLKLLPLRR 232
L+ + R
Sbjct: 254 YTIPGLVAAITSAR 267
>gi|282853381|ref|ZP_06262718.1| uroporphyrinogen-III synthase [Propionibacterium acnes J139]
gi|282582834|gb|EFB88214.1| uroporphyrinogen-III synthase [Propionibacterium acnes J139]
gi|314922295|gb|EFS86126.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL001PA1]
gi|314965355|gb|EFT09454.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL082PA2]
gi|314982515|gb|EFT26608.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL110PA3]
gi|315091058|gb|EFT63034.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL110PA4]
gi|315094146|gb|EFT66122.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL060PA1]
gi|315104801|gb|EFT76777.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL050PA2]
gi|327329300|gb|EGE71060.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Propionibacterium acnes HL103PA1]
Length = 571
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 64/239 (26%), Gaps = 19/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I+I R + ++Q G + +P R + Y + T
Sbjct: 293 NILIPRTRDHSATLPSRLQSYGAHSLDVPTISMEPPRTPQQMDKAIRGLVEGRYEWVVFT 352
Query: 56 SSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN--LAK 104
S+ ++ + + I AI +++ + G F LA
Sbjct: 353 SANAVRAVSEKLEQIGLDARAYSGLRIAAIFDSTINALAEWGVRPDFVPSGEQSTRALAA 412
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ P + L E + + Y + A P + +
Sbjct: 413 VFPAFDEALDPINRVFVPRADIATESLSADLSELGWEVEDVVGYRTVRAAPPPAETREAI 472
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ DA++F + ++V + + A V +A P
Sbjct: 473 KTGKFDAVVFTSSTTVRNLVGIAGKPHKHTVVAAVGIRTAETCREHGLTVDVIAPEPTA 531
>gi|78187287|ref|YP_375330.1| uroporphyrinogen-III synthase [Chlorobium luteolum DSM 273]
gi|78167189|gb|ABB24287.1| uroporphyrinogen-III synthase [Chlorobium luteolum DSM 273]
Length = 248
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 26/247 (10%), Positives = 67/247 (27%), Gaps = 18/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP +A ++ G V+ P + + I TS S+
Sbjct: 3 NVLVTRPEHQAAAFVRELASHGLDSVVFPTIEIRPVGGW-TVPDLSPFSGIFFTSPNSVG 61
Query: 62 TLPANFCRHTPI--------FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
P + + ++ + +
Sbjct: 62 EFMRRMMEERPCELENLRKATVWAVGKTTEKDLAAYGVTTEPVPKIADAVNLMADIQSED 121
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQNAD--AI 170
+ ++L G D + + + Y + + ++ +L+ +
Sbjct: 122 IEGRTFLFLRGNLSLGVIPDVIQKRGGTCIELTVYENHPPSLEDSAKIRMMLEGGQLDCL 181
Query: 171 LFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPK----ETSL 224
F + S+ + FF + + + A A+ V + + ++
Sbjct: 182 SFTSPSTAVNFFEAMGSTALPEGSLVAAIGTTTAGALKKLGVRVDVIPEYFDGPNFAKAI 241
Query: 225 LKLLPLR 231
+ L R
Sbjct: 242 AEALKQR 248
>gi|17986461|ref|NP_539095.1| uroporphyrinogen-III synthase [Brucella melitensis bv. 1 str. 16M]
gi|23502738|ref|NP_698865.1| uroporphyrinogen-III synthase [Brucella suis 1330]
gi|62290743|ref|YP_222536.1| uroporphyrinogen-III synthase [Brucella abortus bv. 1 str. 9-941]
gi|82700654|ref|YP_415228.1| uroporphyrinogen-III synthase [Brucella melitensis biovar Abortus
2308]
gi|148560094|ref|YP_001259711.1| uroporphyrinogen-III synthase [Brucella ovis ATCC 25840]
gi|161619803|ref|YP_001593690.1| uroporphyrinogen-III synthase [Brucella canis ATCC 23365]
gi|163843910|ref|YP_001628314.1| uroporphyrinogen-III synthase [Brucella suis ATCC 23445]
gi|189024956|ref|YP_001935724.1| uroporphyrinogen-III synthase [Brucella abortus S19]
gi|225628088|ref|ZP_03786123.1| uroporphyrinogen-III synthase [Brucella ceti str. Cudo]
gi|225853323|ref|YP_002733556.1| uroporphyrinogen-III synthase [Brucella melitensis ATCC 23457]
gi|237816249|ref|ZP_04595242.1| uroporphyrinogen-III synthase [Brucella abortus str. 2308 A]
gi|254690031|ref|ZP_05153285.1| uroporphyrinogen-III synthase [Brucella abortus bv. 6 str. 870]
gi|254694520|ref|ZP_05156348.1| uroporphyrinogen-III synthase [Brucella abortus bv. 3 str. Tulya]
gi|254696145|ref|ZP_05157973.1| uroporphyrinogen-III synthase [Brucella abortus bv. 2 str. 86/8/59]
gi|254700530|ref|ZP_05162358.1| uroporphyrinogen-III synthase [Brucella suis bv. 5 str. 513]
gi|254707584|ref|ZP_05169412.1| uroporphyrinogen-III synthase [Brucella pinnipedialis M163/99/10]
gi|254708879|ref|ZP_05170690.1| uroporphyrinogen-III synthase [Brucella pinnipedialis B2/94]
gi|254713698|ref|ZP_05175509.1| uroporphyrinogen-III synthase [Brucella ceti M644/93/1]
gi|254715952|ref|ZP_05177763.1| uroporphyrinogen-III synthase [Brucella ceti M13/05/1]
gi|254731063|ref|ZP_05189641.1| uroporphyrinogen-III synthase [Brucella abortus bv. 4 str. 292]
gi|256030405|ref|ZP_05444019.1| uroporphyrinogen-III synthase [Brucella pinnipedialis M292/94/1]
gi|256045495|ref|ZP_05448378.1| uroporphyrinogen-III synthase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112221|ref|ZP_05453142.1| uroporphyrinogen-III synthase [Brucella melitensis bv. 3 str.
Ether]
gi|256158388|ref|ZP_05456286.1| uroporphyrinogen-III synthase [Brucella ceti M490/95/1]
gi|256253807|ref|ZP_05459343.1| uroporphyrinogen-III synthase [Brucella ceti B1/94]
gi|256258285|ref|ZP_05463821.1| uroporphyrinogen-III synthase [Brucella abortus bv. 9 str. C68]
gi|256263190|ref|ZP_05465722.1| uroporphyrinogen III synthase HEM4 [Brucella melitensis bv. 2 str.
63/9]
gi|260169314|ref|ZP_05756125.1| uroporphyrinogen-III synthase [Brucella sp. F5/99]
gi|260546006|ref|ZP_05821746.1| uroporphyrinogen III synthase HEM4 [Brucella abortus NCTC 8038]
gi|260562804|ref|ZP_05833290.1| uroporphyrinogen III synthase HEM4 [Brucella melitensis bv. 1 str.
16M]
gi|260567625|ref|ZP_05838095.1| uroporphyrinogen III synthase HEM4 [Brucella suis bv. 4 str. 40]
gi|260755567|ref|ZP_05867915.1| uroporphyrinogen-III synthase [Brucella abortus bv. 6 str. 870]
gi|260758790|ref|ZP_05871138.1| uroporphyrinogen-III synthase [Brucella abortus bv. 4 str. 292]
gi|260760514|ref|ZP_05872857.1| uroporphyrinogen-III synthase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884591|ref|ZP_05896205.1| uroporphyrinogen-III synthase [Brucella abortus bv. 9 str. C68]
gi|261214838|ref|ZP_05929119.1| uroporphyrinogen-III synthase [Brucella abortus bv. 3 str. Tulya]
gi|261217715|ref|ZP_05931996.1| uroporphyrinogen-III synthase [Brucella ceti M13/05/1]
gi|261220940|ref|ZP_05935221.1| uroporphyrinogen-III synthase [Brucella ceti B1/94]
gi|261315071|ref|ZP_05954268.1| uroporphyrinogen-III synthase [Brucella pinnipedialis M163/99/10]
gi|261316372|ref|ZP_05955569.1| uroporphyrinogen-III synthase [Brucella pinnipedialis B2/94]
gi|261321438|ref|ZP_05960635.1| uroporphyrinogen-III synthase [Brucella ceti M644/93/1]
gi|261751034|ref|ZP_05994743.1| uroporphyrinogen-III synthase [Brucella suis bv. 5 str. 513]
gi|261758827|ref|ZP_06002536.1| uroporphyrinogen III synthase HEM4 [Brucella sp. F5/99]
gi|265987444|ref|ZP_06100001.1| uroporphyrinogen-III synthase [Brucella pinnipedialis M292/94/1]
gi|265991917|ref|ZP_06104474.1| uroporphyrinogen-III synthase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993648|ref|ZP_06106205.1| uroporphyrinogen-III synthase [Brucella melitensis bv. 3 str.
Ether]
gi|265996900|ref|ZP_06109457.1| uroporphyrinogen-III synthase [Brucella ceti M490/95/1]
gi|294851124|ref|ZP_06791797.1| uroporphyrinogen-III synthase [Brucella sp. NVSL 07-0026]
gi|297247129|ref|ZP_06930847.1| uroporphyrinogen-III synthase [Brucella abortus bv. 5 str. B3196]
gi|17982058|gb|AAL51359.1| uroporphyrinogen-iii synthase [Brucella melitensis bv. 1 str. 16M]
gi|23348755|gb|AAN30780.1| uroporphyrinogen-III synthase [Brucella suis 1330]
gi|62196875|gb|AAX75175.1| HemD, uroporphyrinogen-III synthase [Brucella abortus bv. 1 str.
9-941]
gi|82616755|emb|CAJ11842.1| Uroporphyrinogen III synthase HEM4 [Brucella melitensis biovar
Abortus 2308]
gi|148371351|gb|ABQ61330.1| uroporphyrinogen-III synthase [Brucella ovis ATCC 25840]
gi|161336614|gb|ABX62919.1| Uroporphyrinogen III synthase HEM4 [Brucella canis ATCC 23365]
gi|163674633|gb|ABY38744.1| Uroporphyrinogen III synthase HEM4 [Brucella suis ATCC 23445]
gi|189020528|gb|ACD73250.1| Uroporphyrinogen III synthase HEM4 [Brucella abortus S19]
gi|225616913|gb|EEH13960.1| uroporphyrinogen-III synthase [Brucella ceti str. Cudo]
gi|225641688|gb|ACO01602.1| Uroporphyrinogen III synthase HEM4 [Brucella melitensis ATCC 23457]
gi|237788316|gb|EEP62531.1| uroporphyrinogen-III synthase [Brucella abortus str. 2308 A]
gi|260096113|gb|EEW79989.1| uroporphyrinogen III synthase HEM4 [Brucella abortus NCTC 8038]
gi|260152820|gb|EEW87912.1| uroporphyrinogen III synthase HEM4 [Brucella melitensis bv. 1 str.
16M]
gi|260157143|gb|EEW92223.1| uroporphyrinogen III synthase HEM4 [Brucella suis bv. 4 str. 40]
gi|260669108|gb|EEX56048.1| uroporphyrinogen-III synthase [Brucella abortus bv. 4 str. 292]
gi|260670946|gb|EEX57767.1| uroporphyrinogen-III synthase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675675|gb|EEX62496.1| uroporphyrinogen-III synthase [Brucella abortus bv. 6 str. 870]
gi|260874119|gb|EEX81188.1| uroporphyrinogen-III synthase [Brucella abortus bv. 9 str. C68]
gi|260916445|gb|EEX83306.1| uroporphyrinogen-III synthase [Brucella abortus bv. 3 str. Tulya]
gi|260919524|gb|EEX86177.1| uroporphyrinogen-III synthase [Brucella ceti B1/94]
gi|260922804|gb|EEX89372.1| uroporphyrinogen-III synthase [Brucella ceti M13/05/1]
gi|261294128|gb|EEX97624.1| uroporphyrinogen-III synthase [Brucella ceti M644/93/1]
gi|261295595|gb|EEX99091.1| uroporphyrinogen-III synthase [Brucella pinnipedialis B2/94]
gi|261304097|gb|EEY07594.1| uroporphyrinogen-III synthase [Brucella pinnipedialis M163/99/10]
gi|261738811|gb|EEY26807.1| uroporphyrinogen III synthase HEM4 [Brucella sp. F5/99]
gi|261740787|gb|EEY28713.1| uroporphyrinogen-III synthase [Brucella suis bv. 5 str. 513]
gi|262551368|gb|EEZ07358.1| uroporphyrinogen-III synthase [Brucella ceti M490/95/1]
gi|262764629|gb|EEZ10550.1| uroporphyrinogen-III synthase [Brucella melitensis bv. 3 str.
Ether]
gi|263002983|gb|EEZ15276.1| uroporphyrinogen-III synthase [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093112|gb|EEZ17247.1| uroporphyrinogen III synthase HEM4 [Brucella melitensis bv. 2 str.
63/9]
gi|264659641|gb|EEZ29902.1| uroporphyrinogen-III synthase [Brucella pinnipedialis M292/94/1]
gi|294819713|gb|EFG36712.1| uroporphyrinogen-III synthase [Brucella sp. NVSL 07-0026]
gi|297174298|gb|EFH33645.1| uroporphyrinogen-III synthase [Brucella abortus bv. 5 str. B3196]
gi|326409886|gb|ADZ66951.1| Uroporphyrinogen III synthase HEM4 [Brucella melitensis M28]
gi|326539600|gb|ADZ87815.1| uroporphyrinogen III synthase HEM4 [Brucella melitensis M5-90]
Length = 235
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 113/235 (48%), Gaps = 15/235 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP A +T K++ GY PV++PLS + +V + + A+ ITS+ +
Sbjct: 3 RVLVTRPEPAAAQTAAKLRAAGYEPVLLPLSRTVALSFTV---PDEVFDALTITSANAFR 59
Query: 62 TLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ R P+FA+GE +A A++ GF + G +++ LA + + P
Sbjct: 60 HIAPERLLPYRTLPLFAVGEGTAKAAQEAGFKHVIEGGGDAVRLAGTMRQ---ALAPTAR 116
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYARS 176
++YL G+ R FED + + + + V D Y ++ + YP + +L + A++ Y+
Sbjct: 117 VLYLAGRVRQPVFEDEVAANGLSMMVCDVYDTESVMYPPQALSRILGHAPFVAVMLYSGV 176
Query: 177 SVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ F P FLC+S +A+ +P+S+ V+ P E L +L
Sbjct: 177 AAASFVEAMRSITPPFDEKTRFLCISARVAAKLPSSWLQQALVSDHPDEKGLFRL 231
>gi|189499888|ref|YP_001959358.1| Uroporphyrinogen-III synthase [Chlorobium phaeobacteroides BS1]
gi|189495329|gb|ACE03877.1| Uroporphyrinogen-III synthase [Chlorobium phaeobacteroides BS1]
Length = 249
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 63/248 (25%), Gaps = 19/248 (7%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP +A ++++K V+ P SY TS S
Sbjct: 1 MKSVLVTRPKHQAGSFVQELKKYNLGSVVFPTIEIRPASGWQI-PDISSYSGAFFTSPNS 59
Query: 60 LSTLPANFCRHTP--------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ P + + ++ E
Sbjct: 60 VRYFLERLRTEAPDELRKLTSTRVFAVGKTTAGDLAEYGIETEPIPKVADAVNLMQEISP 119
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ---NAD 168
K ++L G + E I Y + T +
Sbjct: 120 EEIQGKSFLFLRGNLSLGIIPAAIAERGGRCDSIIVYENHPPDLEATEKVKKMVGEGKIS 179
Query: 169 AILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPK----ET 222
+ F + S+ +F KI + A+A+ +V V +
Sbjct: 180 CLSFTSPSTAQNYFKAVGSKKIPSGVLVAAIGKTTATALEKLGVSVDIVPEYYDGPHFAK 239
Query: 223 SLLKLLPL 230
++ + L
Sbjct: 240 AIAEALQK 247
>gi|324990198|gb|EGC22136.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK353]
Length = 241
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 66/226 (29%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A+ + TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQAGFETHHVPLIRCQSLPLPEAVQAILSEADWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L P + ++
Sbjct: 64 EAFSPYLKADFQIATIGPQTSQALDKLGRDCAFQASS--HYGLDFIQEWLALDLPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHDVWAWPMYETTSNPAGQDQLETYLSQENVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQAVKESGYGVDYQPQSPSVEEMV 227
>gi|256370287|ref|YP_003107798.1| uroporphyrinogen-III synthetase [Brucella microti CCM 4915]
gi|256000450|gb|ACU48849.1| uroporphyrinogen-III synthetase [Brucella microti CCM 4915]
Length = 235
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 113/235 (48%), Gaps = 15/235 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP A +T K++ GY PV++PLS + +V + + A+ ITS+ +
Sbjct: 3 RVLVTRPEPAAAQTAAKLRAAGYEPVLLPLSRTVALSFTV---PDEVFDALTITSANAFR 59
Query: 62 TLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ R P+FA+GE +A A++ GF + G +++ LA + + P
Sbjct: 60 HIAPERLLPYRTLPLFAVGEGTAKAAQEAGFKHVIEGGGDAVRLAGTMRQ---ALAPTAR 116
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYARS 176
++YL G+ R FED + + + + V D Y ++ + YP + +L + A++ Y+
Sbjct: 117 VLYLAGRVRQPVFEDEVAANGLSMMVCDVYDTESVMYPPQALSRILGHAPFIAVMLYSGV 176
Query: 177 SVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ F P FLC+S +A+ +P+S+ V+ P E L +L
Sbjct: 177 AAASFVEAMRSITPPFDEKTRFLCISARVAAKLPSSWLQQALVSDHPDEKGLFRL 231
>gi|253579010|ref|ZP_04856281.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849953|gb|EES77912.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 501
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 76/247 (30%), Gaps = 19/247 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
+++TRP + +T + +++ G + +P + ++ +Y I TS
Sbjct: 255 KVLVTRPRQHISKTADLLRQKGAEVLELPSICTVPVEDNGRLYEAFEKLDTYQWIIFTSP 314
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ R I IGE + ++ F + E
Sbjct: 315 AGVEIFFDEMDRKEMDVRSLGQAKIAVIGEGTKKKLKEHHLLADFVPDVYDGDTLG--AE 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA--YPETTMKNLLQN 166
+ ++ + N + L + + I Y ++ + + +
Sbjct: 373 LAKELQGNEKILIPRAEAGNKKLTELLEQTGAQVDDIATYTTRYEKSRLIDEKKELETGS 432
Query: 167 ADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F + S+V F C+ +A A +A SL+
Sbjct: 433 VDCVVFTSASTVKGFVEGTKGLDYTKVKAACIGKQTKAAADAYGMQ-TRMAKKATIESLI 491
Query: 226 KLLPLRR 232
+L+ +
Sbjct: 492 ELVEEMK 498
>gi|323353344|ref|ZP_08087877.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis VMC66]
gi|322121290|gb|EFX93053.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis VMC66]
Length = 241
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 66/226 (29%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A+ + TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQAGFETHHVPLIRCQSLPLPEAVQAILSEADWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L P + ++
Sbjct: 64 EAFSPYLKADYQIATIGPQTSQALDKLGRACDFQASS--HYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAETLKEAGHDVWAWPMYETTSNPAGQDQLQTYLSQENVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQAVKESGYGVDYQPQSPSVEEMV 227
>gi|253681070|ref|ZP_04861873.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum D str. 1873]
gi|253562919|gb|EES92365.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum D str. 1873]
Length = 498
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 39/248 (15%), Positives = 78/248 (31%), Gaps = 22/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
IV+TR ++ EKI +G P+ +P +V L + + TS
Sbjct: 253 NIVVTRSRVQSSNLVEKIIDLGGNPIEIPTIKIEEIVNNVELDNGIKNINEFNYLIFTSR 312
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ R+ I IG +A ++ G K A+ I+E
Sbjct: 313 NAVKIFFKRLFGLNFDSRNLRNLKIVCIGTGTADELKKYGIIPDILPKKFI---AESIIE 369
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ +++ + + + + Y + + + + NLL N +
Sbjct: 370 SLKEVVKKDDRVFIPRSSEARTYLVEELNKLCHVTEVKIYNTIKDSGKKDEIVNLLNNRN 429
Query: 169 A--ILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
I F + S+V F + + + + + I V A
Sbjct: 430 IDYITFTSSSTVKNFIEVIGKENVEKLKNEKLVSIGPITSKTIEDFGLKVYNEAKEYTIE 489
Query: 223 SLLKLLPL 230
++K L
Sbjct: 490 GIIKTLIR 497
>gi|261402501|ref|YP_003246725.1| Uroporphyrinogen III synthase HEM4 [Methanocaldococcus vulcanius
M7]
gi|261369494|gb|ACX72243.1| Uroporphyrinogen III synthase HEM4 [Methanocaldococcus vulcanius
M7]
Length = 244
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 72/247 (29%), Gaps = 23/247 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +VITRP ++A ++K + P++ P ++++ YG I TS +
Sbjct: 1 MKVVITRPKERAEAFSTILKKENFDPIIFPTLKLEYNKD--LKIDLDEYGWIIFTSPSGV 58
Query: 61 STLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
L + A +K F + ++ E K
Sbjct: 59 IGLNNILSEKEKENVKDKKIAAIGEKTAKMVKKIFGKYPDIVPKQYTAECLLEEIKKRAD 118
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK-----NLLQNADA 169
+ ++++ + ++ Y S + + M+ +
Sbjct: 119 KNDRFLVPTTPSTRD-----ILKNNLNADLVFVYKSVEPENLKENMEVLKETLKNEERFI 173
Query: 170 ILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
I F + + FF + + A I N + +L
Sbjct: 174 ITFTSGLTAKNFFKYVDDEFYQMIKNNYIVAIGPITAKVIQKFGINP-KIPDKYTIEGML 232
Query: 226 KLLPLRR 232
+++ R
Sbjct: 233 EVIKSIR 239
>gi|15603678|ref|NP_246752.1| HemX [Pasteurella multocida subsp. multocida str. Pm70]
gi|12722235|gb|AAK03897.1| HemX [Pasteurella multocida subsp. multocida str. Pm70]
Length = 248
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 74/244 (30%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M +++TRP + + E + + G + +PL RE L+ ++ + S
Sbjct: 1 MAVLVTRPDVRGAQLTEMLIQAGIFAIHLPLFTIETGRELNDLPNKLSQLKAGDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + + + + ++
Sbjct: 61 KHAVQYAVDTLKNTGFSWRTDLAYFAVGQRSAEFFASQIERAVLYPYRQESSEGLLALDA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ +K ++ L G +F + + ++CY AY ++ + A
Sbjct: 121 MQDLSEKHILILRGNGGREYFSEQAQLRGAKVETLECYQRVPTAYNNAEQISICKRAGIN 180
Query: 170 -ILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++ + + Y S + +S IA+ V V+ L
Sbjct: 181 RLVISSAEILQYLVDFVPESEHNWLKSCQLVTVSQRIANLAKQLGWCDVVVSPRADNVHL 240
Query: 225 LKLL 228
LK L
Sbjct: 241 LKTL 244
>gi|313896551|ref|ZP_07830100.1| uroporphyrinogen-III synthase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974736|gb|EFR40202.1| uroporphyrinogen-III synthase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 244
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 63/239 (26%), Gaps = 15/239 (6%)
Query: 6 TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-----SVFLAMQQSYGAIAITSSESL 60
TR +A EK+ +G + P+ + +A +Y + TS +
Sbjct: 2 TRARVQASALTEKLTALGAACIEAPVIRIAPPADGYAALDGAIAELNAYQWLIFTSVNGV 61
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINL-------AKIIVEQKVLF 113
A + A + +L + E + L
Sbjct: 62 EHFFARLHAAGKDTRALGYARVAAIGAATSAALRAFGIRADLVPPEFRAEAVAEELRPLL 121
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK-NLLQNADAILF 172
P+ ++ + D L H + V+ Y + + D + F
Sbjct: 122 PPRARILLPRAQEARDVLPDTLRAHGAIVDVVAAYETVPEIEDAAIAQGLASGEIDMVTF 181
Query: 173 YARSSVLYFFSLPLP--AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ S+V + C+ A + VA L++ +
Sbjct: 182 TSSSTVKNLVKMLGNITPLQQVKIACIGPVTADTARSFALEPDIVAKEYTIDGLVRSIK 240
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITSSE 58
I++ R + + ++ G I ++ + + E +A + TSS
Sbjct: 126 RILLPRAQEARDVLPDTLRAHGAIVDVVAAYETVPEIEDAAIAQGLASGEIDMVTFTSSS 185
Query: 59 SLSTLPANFCRHTPIF 74
++ L TP+
Sbjct: 186 TVKNLVKMLGNITPLQ 201
>gi|326201522|ref|ZP_08191393.1| uroporphyrin-III C-methyltransferase [Clostridium papyrosolvens DSM
2782]
gi|325988122|gb|EGD48947.1| uroporphyrin-III C-methyltransferase [Clostridium papyrosolvens DSM
2782]
Length = 504
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 84/244 (34%), Gaps = 21/244 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
+++TRP + EK++++G P+ P + ++ L YG I TS
Sbjct: 255 KVLVTRPKASSGTLVEKLRQLGAEPLEYPCIEVVPIPQNEKLCSVCEKLSEYGWILFTSK 314
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIV 107
+ + I +G +A ++ G F + + +LA+ +
Sbjct: 315 NGIQIFFDYLNSKGLDARVLANIKIGTVGSQTARALKEVGLISDFTPEIFDGSHLAQGVS 374
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + ++ + + + I + Y++ I ++ ++ +
Sbjct: 375 QLVGEN---EKVLICDAAIASDDIVNIFNNNNIKFDRVPLYHTNYINENSDEIRKMIIDG 431
Query: 168 --DAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I F + S+V F + + S +C+ N A A V ++ S+
Sbjct: 432 ELKYITFTSASTVEGFMASVKDIPLGSMTAVCIGNQTAEAAKKYNLTYV-ISEKSTIDSI 490
Query: 225 LKLL 228
L
Sbjct: 491 TDKL 494
>gi|291523525|emb|CBK81818.1| porphobilinogen deaminase [Coprococcus catus GD/7]
Length = 799
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 9/236 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYG--AIAITSSES 59
I++T A EKI+K+G PV+M L ++ + G + TS
Sbjct: 555 KILVTATEIIAEPLAEKIRKLGGEPVVMSLISVRAEKMYGLKEVLVRPGKRWLVFTSRNG 614
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ-------KGFTQIFHGKDNSINLAKIIVEQKVL 112
+ + I + + +
Sbjct: 615 VRFFFEQMKKEEIDIRILGICRIAVMGAGTRRELENWGCYADLMPEQSCSESLAKALCEN 674
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ + + + L E + Y+++ + +K +L++ DA+ F
Sbjct: 675 VQYDEEICLFRAEEASDVLIKRLREKGFFVVDTPMYHTEKMWKKAALLKEVLEDMDAVTF 734
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V F + + +A +C+ A A + ++ +A L L
Sbjct: 735 CSASAVRAFAQMTEGQRFAAKNVCIGPVTAEAAEKADISIDKIAGQYDLEGLAAAL 790
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 35/133 (26%), Gaps = 6/133 (4%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L K I Q+ K ++ + + + + V+ +
Sbjct: 539 LKKEIDWQQAGALSGKKILVTATEIIAEPLAEKIRKLGGEPVVMSLISVRAEKMYGLKEV 598
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVVTV 215
+ ++F +R+ V +FF +I + + +
Sbjct: 599 LVRPGKRWLVFTSRNGVRFFFEQMKKEEIDIRILGICRIAVMGAGTRRELENWGCYADLM 658
Query: 216 ACFPKETSLLKLL 228
SL K L
Sbjct: 659 PEQSCSESLAKAL 671
>gi|317471623|ref|ZP_07930967.1| uroporphyrinogen-III synthase HemD [Anaerostipes sp. 3_2_56FAA]
gi|316900938|gb|EFV22908.1| uroporphyrinogen-III synthase HemD [Anaerostipes sp. 3_2_56FAA]
Length = 373
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 72/246 (29%), Gaps = 16/246 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TRP + +T + G + MP R+ S+ L SY I TS
Sbjct: 124 RILLTRPKELIKKTAAMFRDQGAEVLEMPSISIEPVRDQRKLSMALEKINSYDWIVFTSV 183
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ-------IFHGKDNSINLAKIIVEQK 110
+ + + G + +
Sbjct: 184 NGVRIFFEEMKHQKKDIRSLGSCRIASIGAGTKNALEERGLFCDLVPEHYDGVSLAGTLA 243
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEH-KIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
T + ++ N L + I I Y +Q + +K +++
Sbjct: 244 DRLTGTEHILIPRAASGNQEMIRILHKKPGIQTDDIGIYDTQYENWQLVPVKEMIESGEI 303
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D +F + S+V F + I C+ A A V +A SL++
Sbjct: 304 DWTVFTSASTVRGFAAAVADTCIKGMKAACIGEQTARAAEEVGMK-VYIAEQASAESLVR 362
Query: 227 LLPLRR 232
L+ +
Sbjct: 363 LVSEHQ 368
>gi|86747440|ref|YP_483936.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
HaA2]
gi|86570468|gb|ABD05025.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
HaA2]
Length = 265
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 88/240 (36%), Gaps = 14/240 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP T ++ GY ++ P+ F Y + +TS+ +L
Sbjct: 21 LLVTRPQPDNDATAAALRAKGYDVLLAPMLRFEPAPFP--DDQDTDYTGVIVTSANALRA 78
Query: 63 LPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP-QK 117
+ P+FA+G+ +A AR GF + + ++ L + +
Sbjct: 79 IADQPGFARLLKLPLFAVGKHTARAARDAGFKDVIVAEGDAARLRLKVADSVKGKKKAAG 138
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYAR 175
L+YL G + L E + + Y + T+ + +L Y+R
Sbjct: 139 ALLYLAGADLSRDLAGELREDGFHVVMQTTYRMLPVQTLPATICDEFAANRIEAVLHYSR 198
Query: 176 SSVLYFFSLPLPAKISAAFLCL-----SNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
S F + I + L + S++++ + + V VA P E +L + L
Sbjct: 199 RSARAFIDATRASGIEISALAIPQCCLSDSVSDVVREAGATQVMVARTPDEKALFEALDR 258
>gi|167038281|ref|YP_001665859.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116685|ref|YP_004186844.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166857115|gb|ABY95523.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929776|gb|ADV80461.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 497
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 74/239 (30%), Gaps = 18/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSES 59
I++TR +++ + ++ + + G V+ P +++ FL + TS
Sbjct: 254 RILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFLDNIVKFLEEIHKFDYAVFTSVND 313
Query: 60 LSTLPANFCR--------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + AIG +A ++ + +++ V
Sbjct: 314 VWSFIEASREKRVDLRNLRIKVVAIGSKTAEALENIFIYPDIIPEEYTSYSLANALKKHV 373
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAI 170
I L + + ++ I Y ++ + + + L+ D
Sbjct: 374 E----GKNIALLTSQIGGDILMESLGNCANVQKIVAYKNEPNYEIKEKLISELRKGIDIA 429
Query: 171 LFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+F + S+ Y L ++ + AI NV + L++
Sbjct: 430 VFTSSSTFNYMHQLIGDEINLLKNSKIAAIGPVTKKAIEDKGFNVDIMPSEYTTEKLIE 488
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 33/135 (24%), Gaps = 5/135 (3%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L + + K ++ ++ + L E + V
Sbjct: 238 LRDRLKWYENKKLFGKRILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFLDNIVKFL 297
Query: 162 NLLQNADAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ D +F + + V F + + + + A A+ + +
Sbjct: 298 EEIHKFDYAVFTSVNDVWSFIEASREKRVDLRNLRIKVVAIGSKTAEALENIFIYPDIIP 357
Query: 217 CFPKETSLLKLLPLR 231
SL L
Sbjct: 358 EEYTSYSLANALKKH 372
>gi|229520089|ref|ZP_04409517.1| uroporphyrinogen-III synthase [Vibrio cholerae TM 11079-80]
gi|229342877|gb|EEO07867.1| uroporphyrinogen-III synthase [Vibrio cholerae TM 11079-80]
Length = 260
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 67/240 (27%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 6 MTVLVTRPDEQGTELCQLLHQQGTPALHHPLLAISASPQLTALAEDLSSFDIIIAVSQHA 65
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q + ++ +
Sbjct: 66 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 125
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILF 172
K ++ L G L+E +R + Y + + K L D+++
Sbjct: 126 AGKKVLILRGNGGRELIYSTLVERGATVRYQEAYCRHERPFAAAECVQKWQLAKVDSLVI 185
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F P L S IA+ + + V L+ L
Sbjct: 186 TSSEQLAFFIRQFETSHLPWVQQLTLLVPSQRIATLAHQLGFHRIVVTLSAANRDLVAAL 245
>gi|295109820|emb|CBL23773.1| uroporphyrinogen-III synthase /uroporphyrinogen-III
C-methyltransferase [Ruminococcus obeum A2-162]
Length = 500
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 76/248 (30%), Gaps = 21/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TRP ++ RT ++++K G + +P + E +Y IA TS
Sbjct: 255 KVLVTRPKGRSSRTADELRKRGAEVLELPSIRTVALDEQTELWQAFDRMDTYQWIAFTSP 314
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT--- 114
+ A + + L +I E +
Sbjct: 315 TGAEIFFEELKNAHK---DIRSLAGVHIAAIGQGTAKVLEERGILVDLIPEIYDGDSLGE 371
Query: 115 -------PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-- 165
+ ++ N + L H + I Y + + ++
Sbjct: 372 ALAAKLTGGEKVLLPRAGKGNENLVKILKTHGARVDDIATYDTVYEKSRLINIGEEIRTG 431
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ D ++F + S+V F A S C+ +A A VA +L
Sbjct: 432 SIDCVVFTSASTVKGFVESTGLADYSGVVAACIGKQTKAAADAYGMQ-TFVAEKATIEAL 490
Query: 225 LKLLPLRR 232
++L+ +
Sbjct: 491 IELVVKIK 498
>gi|332360582|gb|EGJ38392.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK1056]
Length = 241
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 66/226 (29%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A+ + TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQAGFETHHVPLIRCQSLPLPEAVQAVLPEADWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L P + ++
Sbjct: 64 EAFSPYLKVDYQIATIGPQTSQALDKLGRDCDFQASS--HYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHDVWAWPMYETTSNPAGQDQLETYLSQENVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQAVKESGYRVDYQPQSPSVEEMV 227
>gi|269119645|ref|YP_003307822.1| uroporphyrin-III C-methyltransferase [Sebaldella termitidis ATCC
33386]
gi|268613523|gb|ACZ07891.1| uroporphyrin-III C-methyltransferase [Sebaldella termitidis ATCC
33386]
Length = 493
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 76/236 (32%), Gaps = 12/236 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TR ++ EKI + G + +P + L + Y A+ S+ ++
Sbjct: 255 VLVTRNQEQVHSLSEKINEAGGSALELPFINIRY--NDFELPDFKDYKAVLFNSANAVRG 312
Query: 63 LPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
L A I A+G + + F K+ I I
Sbjct: 313 LFAGIKDLRVLGDIKIGAVGIKTLEEIEKNKIIPDFFPKEYKIEKLAEIA--VEFTGEND 370
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + F Y +H + + Y ++ I +T +++ + +D + F + S+
Sbjct: 371 RILVVTSDISPFDESAYSEKHSRTFQALKVYNTEKIIRDKTEVEDYINKSDILTFLSSST 430
Query: 178 VLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
F + + I NV A LL+++
Sbjct: 431 FEAFMESIKSDKKLLEGKVIASIGPVTSDTIRKYGVNVDIEAKSYTAEGLLEMIGK 486
>gi|254508820|ref|ZP_05120931.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus 16]
gi|219548277|gb|EED25291.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus 16]
Length = 247
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 28/240 (11%), Positives = 64/240 (26%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-QQSYGAIAITSSES 59
M +++TRP ++ +++ G + P+ E L + S +
Sbjct: 1 MAVLVTRPGEQGHALCQQLHDAGITALHHPIISIQPGSELPTLPDHLAECEIVIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ ++ TQ + +++ +
Sbjct: 61 VTFSHQALQYQNQVWPDRVTYLAVGQKTAHVLSKVTQQKVHYPQIGDSEHLLLLDMLSRV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LF 172
K ++ L G D LIE + ++ Y ++I + + + Q+ +
Sbjct: 121 KGKKVVILRGNGGRELIYDTLIERGATVDYVETYKRENITFRSDLLVPIWQDKQITQLVI 180
Query: 173 YARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F S I V LL L
Sbjct: 181 TSSGQLCHFVDQLSASQRVWLCGLQLFVPSERIVQEALKLGFEKVINTHSASNKDLLAAL 240
>gi|297543914|ref|YP_003676216.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841689|gb|ADH60205.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 497
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 74/239 (30%), Gaps = 18/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSES 59
I++TR +++ + ++ + + G V+ P +++ FL + TS
Sbjct: 254 RILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFLDNIVKFLEEIHKFDYAVFTSVNG 313
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + AIG +A ++ + +++ V
Sbjct: 314 VWSFIEASREKRFDLRNLSIKVVAIGSKTAEALENIFIYPDIIPEEYTSYSLANALKKHV 373
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAI 170
I L + + ++ I Y ++ + + + L+ D
Sbjct: 374 E----GKNIALLTSQIGGDILMESLGNCANVQKIVAYKNEPNYEIKEKLISELRKGIDIA 429
Query: 171 LFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+F + S+ Y L ++ + AI NV + L++
Sbjct: 430 VFTSSSTFNYMHQLIGDEINLLKNSKIAAIGPVTKKAIEDKGFNVDIMPSEYTTEKLIE 488
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/135 (11%), Positives = 34/135 (25%), Gaps = 5/135 (3%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L + + K ++ ++ + L E + V
Sbjct: 238 LRDRLKWYENKKLFGKRILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFLDNIVKFL 297
Query: 162 NLLQNADAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ D +F + + V F +S + + + A A+ + +
Sbjct: 298 EEIHKFDYAVFTSVNGVWSFIEASREKRFDLRNLSIKVVAIGSKTAEALENIFIYPDIIP 357
Query: 217 CFPKETSLLKLLPLR 231
SL L
Sbjct: 358 EEYTSYSLANALKKH 372
>gi|167769474|ref|ZP_02441527.1| hypothetical protein ANACOL_00808 [Anaerotruncus colihominis DSM
17241]
gi|167668442|gb|EDS12572.1| hypothetical protein ANACOL_00808 [Anaerotruncus colihominis DSM
17241]
Length = 494
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 23/244 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
IV+TRP ++A +++ +G P + +A Y +A TS
Sbjct: 254 RIVVTRPRERAGTLAARLRNLGADVFEYPCIRTVPLVPCPEMEAAVARLTDYEYLAFTSP 313
Query: 58 ESLSTLPANFCRH---------TPIFAIGEASACLARQKGFT-QIFHGKDNSINLAKIIV 107
+ L RH + AIG + R+ G ++ +L +
Sbjct: 314 AGVGCLWDMLERHGSDARALGGVKLAAIGTGTDRELRKHGLRADYIPAVYDAAHLGAGLA 373
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-- 165
E ++ L + + + L KI I CY + + ++K L+Q
Sbjct: 374 EIC-----TGRVLILRAELGSPALTEALDRGKISYDDIHCYTTVYESEYAASLKALIQSG 428
Query: 166 NADAILFYARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKNVVTVACFPKETSL 224
D + F + S+V F + S +C+ A+ V VA +L
Sbjct: 429 KLDLVTFTSASTVKGFAASVGACDFSRITGVCIGEQTAAEAKHHGI-PVIVAKRADIDAL 487
Query: 225 LKLL 228
+ +
Sbjct: 488 VDAI 491
>gi|288819139|ref|YP_003433487.1| uroporphyrinogen-III synthetase [Hydrogenobacter thermophilus TK-6]
gi|288788539|dbj|BAI70286.1| uroporphyrinogen-III synthetase [Hydrogenobacter thermophilus TK-6]
gi|308752723|gb|ADO46206.1| Uroporphyrinogen III synthase HEM4 [Hydrogenobacter thermophilus
TK-6]
Length = 236
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 88/235 (37%), Gaps = 15/235 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR + + +E ++ G++ + +PL F ++ + + S+++++
Sbjct: 3 KVVLTRSEEDIQKDRELFEREGFVVIPLPLIKTEPVE---FELLEDDFDFVVFPSAKAVN 59
Query: 62 TL--PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + A+GEA+ + ++ ++ K++++ + +
Sbjct: 60 YFLSRRRLKGNEKVIAVGEATKKAVERYNYSVYQVPENYYAEEIKLLLKGQK-----GKV 114
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + L ++ ++ Y ++ + Y + + D ++F + S+V
Sbjct: 115 LIPRSQEGREELIKELENLGFYVKALNVYTTKGVLYQKEEFLKKISEGDVVVFASPSAVR 174
Query: 180 YFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
FF+ +C+ + + + + P S++KLL
Sbjct: 175 SFFANLPKPEGAAILKEKKVVCIGKTTNQELFSLCGHSGLLPEKPSFESIVKLLK 229
>gi|242041957|ref|XP_002468373.1| hypothetical protein SORBIDRAFT_01g044830 [Sorghum bicolor]
gi|241922227|gb|EER95371.1| hypothetical protein SORBIDRAFT_01g044830 [Sorghum bicolor]
Length = 296
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 80/246 (32%), Gaps = 16/246 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
+V+TR K R ++K + +PL + ++ L + I ITS E+
Sbjct: 43 VVVTREQGKNARLIAALEKHNIHSLELPLIKHVEGPDTERLSDVLRNDKFDWITITSPEA 102
Query: 60 LSTLPANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK----IIVEQKV 111
+ + I +G +A + + + + + E
Sbjct: 103 AAVFLQGWKAAGSPKVRIAVVGAGTARVFHEVSESDDQSFEVAFSPSKALGKVLASELPR 162
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++Y +D L E + ++ Y + + E NL +A +
Sbjct: 163 SNENSCKVLYPASAKAGHEIQDGLSERGFDVTRLNTYTTVPVEDVEPLTLNLAISAPVVA 222
Query: 172 FYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKET----SLLK 226
+ S++ + +L + + C+ ASA + P S+L+
Sbjct: 223 VASPSALRAWLNLISKVDSWNNSIACIGETTASAAKKLGLKSIYYPTTPGLEGWVDSILE 282
Query: 227 LLPLRR 232
L + R
Sbjct: 283 ALRVHR 288
>gi|89098940|ref|ZP_01171820.1| uroporphyrinogen-III synthetase [Bacillus sp. NRRL B-14911]
gi|89086344|gb|EAR65465.1| uroporphyrinogen-III synthetase [Bacillus sp. NRRL B-14911]
Length = 259
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 79/250 (31%), Gaps = 21/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++ R +A E I+ G IPV +PL F + + +Y + TS
Sbjct: 12 KVLVPRGKDQAGPFSELIRSYGGIPVEIPLLAFRPAEVTEEILHAVRELPTYDWVIFTSK 71
Query: 58 ESLSTLPANFCR---HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+L T + R I AIG + A + G F ++ + I E
Sbjct: 72 NALETFISFAGRNAVFPKIAAIGTKTERAAEESGLAVSFTPEEFAA--EGFIDEFLPFVE 129
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILF 172
++ G + D L + I Y + + +L+N D + F
Sbjct: 130 KGMKVLIPKGNKARSYIADELKRAGAEPQEIIIYETGFPEDSGEKLAVMLKNGSLDVLAF 189
Query: 173 YARSSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ S+V +F + AA C+ V V L K
Sbjct: 190 TSPSTVEHFMEIVRKTGAEAAIKGCLVACIGPVTQKRAEELGLGVHVVPAGYTIEDLAKS 249
Query: 228 LP-----LRR 232
+ R+
Sbjct: 250 IAAELNQRRK 259
>gi|238784738|ref|ZP_04628741.1| Uroporphyrinogen-III synthase [Yersinia bercovieri ATCC 43970]
gi|238714334|gb|EEQ06343.1| Uroporphyrinogen-III synthase [Yersinia bercovieri ATCC 43970]
Length = 247
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 71/241 (29%), Gaps = 17/241 (7%)
Query: 6 TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSESLS 61
TRP + +++ +G + PL F + L Q+ + S ++
Sbjct: 2 TRPSPSGEQLVSRLRALGRVAYHAPLIDFSPGDDLPKLPALLQNMQAGDLVFALSQNAVR 61
Query: 62 TLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
R+ ++ LA +++ +
Sbjct: 62 YANPLLKRNNLLWPAQLSYYAIGRGTALALHTASRLHVTFPPMGETSEMLLLLPDLQKLS 121
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFY 173
K + L G + L + + +CY I Y + Q + ++
Sbjct: 122 GKKALLLRGNGGRELLGESLAQRGAEVTFCECYQRSPIFYDGSEQSAHWQRAGVNILVVT 181
Query: 174 ARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + ++L + + +S+ +A+ + + VA +L++ L
Sbjct: 182 SGEMLQQIYTLVPDYYRSSWLLRCRLVVVSDRLATLAAQMGWSDIRVAENADNDALIRAL 241
Query: 229 P 229
Sbjct: 242 Q 242
>gi|148978778|ref|ZP_01815158.1| uroporphyrinogen-III synthetase [Vibrionales bacterium SWAT-3]
gi|145962199|gb|EDK27483.1| uroporphyrinogen-III synthetase [Vibrionales bacterium SWAT-3]
Length = 242
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 70/241 (29%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP + +++ G + PL I + ++ L+ + I S +
Sbjct: 1 MTVLVTRPGVEGQSLCQQLADEGVQAIHHPLIRIIDNPDTANLSVRLNNSDIIIAVSHHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + + I+ + + ++ ++
Sbjct: 61 VTAAQNILSKTSSIWPTSPLYLGVGQKTAHVLSKVCKQKVNYPQVSDSEHLLKLAELRDV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ L G D L+ + + Y + I + N ++
Sbjct: 121 NNKSILILRGNGGRELIRDSLLNLGAQVSYCETYRREYIPINDHNTYQTWINKKTSKVVV 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ + Y S+ + S IA + VT LL L
Sbjct: 181 TSQEQLEYLCSITPGEYSAWLSTRHLFVPSKRIAQRAQQLGFSNVTNTQSAANQILLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|269961541|ref|ZP_06175904.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833770|gb|EEZ87866.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 242
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 72/241 (29%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-DRESVFLAMQQSYGAIAITSSES 59
M +++TRP ++ + +++ G + PL + ++ ++ I S +
Sbjct: 1 MAVLVTRPGEQGMALCSLLERHGKTAIHHPLIDIVADLSDTQLSKYTETAQIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ H ++ TQ + ++ ++
Sbjct: 61 VQCAEQILQNHAKSWSKQAIYLAVGQKTAHYLSKCTQQKVHYPQVSDSEHLLQLPELNNV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
++ ++ L G +D L+ + + Y + I + + +L + I+
Sbjct: 121 EKQTVLILRGNGGRELIKDALVRRGAKVHYSETYKREFIPFDPVSCVSLWKTQQIDQIIV 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y S +++ S IA V LL L
Sbjct: 181 TSGEQLDYLCSQLTSEQLTWLNQQELYIPSQRIADIAIQRGFTQVRCTGSASNQELLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|332534413|ref|ZP_08410253.1| uroporphyrinogen-III synthase HemD [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036147|gb|EGI72622.1| uroporphyrinogen-III synthase HemD [Pseudoalteromonas haloplanktis
ANT/505]
Length = 613
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 82/239 (34%), Gaps = 14/239 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD-RESVFLAMQQSYGAIAITSSESL 60
+I+ITRP K +++++ GY + P+ H S L+ + I S +++
Sbjct: 3 HILITRPEGKGAALAQQLEQAGYQASLFPVLKITHLTPSSTELSPLLNADKIIFISQDAV 62
Query: 61 ST---LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
S L + +A+G+ +A + ++ + K ++ + +
Sbjct: 63 SALSQLKPDINTKAQFYAVGQQTADVIYEQFGVRAAVPKQYDS--EGLLALKSLAEVDGC 120
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYAR 175
++ + G+ L E L Y + + QN I+ +
Sbjct: 121 NIVLVKGQGGRPELAKTLKERGAFLNNCVVYKREPTESITPNWTDHWKSQNVHGIVTTSN 180
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIP--ASYKNVVTVACFPKETSLLKLL 228
++V F ++ F S IA+ + + +A + ++ +
Sbjct: 181 AAVDAIFKSLTAHQLQWLQQCRFYVASERIAAYLKLQQVSSANIHIAAGASDNAMFTCI 239
>gi|193212400|ref|YP_001998353.1| Uroporphyrinogen-III synthase [Chlorobaculum parvum NCIB 8327]
gi|2495181|sp|Q59335|HEM4_CHLP8 RecName: Full=Uroporphyrinogen-III synthase; Short=UROS; AltName:
Full=Hydroxymethylbilane hydrolyase [cyclizing];
AltName: Full=Uroporphyrinogen-III cosynthase
gi|144480|gb|AAA23114.1| uroporphyrinogenIII cosynthase [Prosthecochloris vibrioformis]
gi|193085877|gb|ACF11153.1| Uroporphyrinogen-III synthase [Chlorobaculum parvum NCIB 8327]
Length = 246
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 70/243 (28%), Gaps = 15/243 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP +A ++++ G V+ P + I TS S
Sbjct: 1 MKTVLVTRPKHQAAPFVRELEQYGLSTVVFPTIEIRPVAGWNV-PDLTKFAGIFFTSPNS 59
Query: 60 LSTLPANFCRHTPIFAIGEASACLA--------RQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + P + + + ++ +
Sbjct: 60 VQFFLKHLLQTAPDELKNLQQTRVWAVGKTTGQDLEKHGVSIEPLPKIADAVNLMADIDP 119
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQ--NAD 168
+ +++ G + + E + Y + + +K++L D
Sbjct: 120 AEIKGQTFLFVRGSLSLGTIPELIAEFGGTCVELTVYENLPPSLEDTQRVKDMLAEGKLD 179
Query: 169 AILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F + S+ FF ++ S + + A+ V + + S K
Sbjct: 180 CLSFTSPSTAKNFFEAIGSKELSDSVQIAAIGTTTSGALEKMGIKVDIIPEYFDGPSFAK 239
Query: 227 LLP 229
+
Sbjct: 240 AIA 242
>gi|154251803|ref|YP_001412627.1| uroporphyrinogen III synthase HEM4 [Parvibaculum lavamentivorans
DS-1]
gi|154155753|gb|ABS62970.1| Uroporphyrinogen III synthase HEM4 [Parvibaculum lavamentivorans
DS-1]
Length = 237
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 93/240 (38%), Gaps = 15/240 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP + E + +G+ V PL ++ + A+ +TS+
Sbjct: 1 MKLLVTRPEADSEALAETLAALGHEAVQAPLLTIRFFDDAT--LPAGDWQALLVTSANGA 58
Query: 61 STLPANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
L + P+ A+G +SA R++GF + + LA + L
Sbjct: 59 RALGRREIARELKSLPVLAVGPSSAAALRREGFVSVKAAGGDVEALAA--LAVAELKPEA 116
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYA 174
PL+++ G L H + Y ++ T + L++ + +LFY+
Sbjct: 117 GPLLHIAGSVVAGDLGSALGAHGFTVERAVFYEAELAQQLPETARRALEDHTLEGVLFYS 176
Query: 175 RSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ F SL + A + CLS +A + V +A P++ +LL L+
Sbjct: 177 PRTARAFTSLVMAAGLKDCLTGVTAYCLSRAVADELRELPFGGVKIAARPEQPALLALIS 236
>gi|312114940|ref|YP_004012536.1| uroporphyrinogen III synthase HEM4 [Rhodomicrobium vannielii ATCC
17100]
gi|311220069|gb|ADP71437.1| Uroporphyrinogen III synthase HEM4 [Rhodomicrobium vannielii ATCC
17100]
Length = 235
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 92/238 (38%), Gaps = 16/238 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TR + A +++++G+ PV+ PL ++ A+ +TS +L
Sbjct: 1 MRLLVTRAEQDAAPFAGELRELGHEPVLQPLIELRALDFDAA--ELENTDALIVTSGNTL 58
Query: 61 STLPANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
L PI+ +G+A+A AR G + ++ P
Sbjct: 59 RALEQAGAIGGLARFPIYCVGDATARRARHCGLQ---KPLAVADTGEQLAAAIVAQAAPG 115
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYA 174
+++ G+ +F L H +P R + Y Q + + ++++ D + +
Sbjct: 116 TRFVHVAGEHLSFDIVGELTSHGMPSRSLAVYVMQAAEAFKPDIADMIERGTLDGVTLLS 175
Query: 175 RSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + SL ++ ++ C+S +A + V ++ P +LL L
Sbjct: 176 PRTAEIYVSLCHRHRLAECAKKLSYFCISETVAQQLRTLEPRGVYISERPNRKALLDL 233
>gi|229543657|ref|ZP_04432717.1| Uroporphyrinogen III synthase HEM4 [Bacillus coagulans 36D1]
gi|229328077|gb|EEN93752.1| Uroporphyrinogen III synthase HEM4 [Bacillus coagulans 36D1]
Length = 262
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 67/243 (27%), Gaps = 16/243 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSSE 58
I+ITR K + +I+ +G P ++P+ F SVFL +Y + TS
Sbjct: 11 NILITRGGKDGEKLAAQIEALGGTPFVVPMVSFRAYADLSASVFLRKLSAYDWVVFTSKN 70
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHG------KDNSINLAKIIVEQKVL 112
+ R + +K + E
Sbjct: 71 GVRYFLEACSRAGIACEHLNINWAAVGKKTAACMEQSGLKVSFAPRKFTAKDFAREFLRS 130
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--I 170
++ G D+L + I Y + + + LL
Sbjct: 131 GHRASRVLLPKGNLAGTEIADFLRKSGIIAEEWIVYETYMPEGAKEKLTRLLGREHIDFA 190
Query: 171 LFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
LF + S+ +F A +S + + A+ + ++L
Sbjct: 191 LFLSPSAFRHFKGALEESGMDIAGLSTRIAVIGPSTRQAVEKAGSRAAVCPDEYTVEAML 250
Query: 226 KLL 228
L
Sbjct: 251 GAL 253
>gi|260774858|ref|ZP_05883760.1| uroporphyrinogen-III synthase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609283|gb|EEX35438.1| uroporphyrinogen-III synthase [Vibrio coralliilyticus ATCC BAA-450]
Length = 242
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 71/239 (29%), Gaps = 11/239 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSES 59
M +++TRP ++ +++ G + PL + ++ S + I S +
Sbjct: 1 MAVLVTRPGEQGRSLCQQLNSAGICALHQPLIEILPGKDLSGIATQLNQFDCILAVSQHA 60
Query: 60 L----STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + I +Q + + ++ +
Sbjct: 61 VTLTQQAFTSQQEWPQTATYIAVGQKTAHVLSKLSQQKVHYPDVGDSEHLLELDILKKVK 120
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFY 173
K ++ L G + L ++ Y +++A+ Q+ ++
Sbjct: 121 GKKVVILRGNGGRELIYETLRSRGAHTSYLEVYKRENLAFDSDLFVPFWQDKHIQQLVIT 180
Query: 174 ARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + YF S A+++ A S IA+ + LL L
Sbjct: 181 SSGQLSYFVSQLTQAQLNWAFGLQLYVPSARIANEAQQMGFLHIINTGSASNKDLLATL 239
>gi|289548467|ref|YP_003473455.1| uroporphyrinogen III synthase HEM4 [Thermocrinis albus DSM 14484]
gi|289182084|gb|ADC89328.1| Uroporphyrinogen III synthase HEM4 [Thermocrinis albus DSM 14484]
Length = 231
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 80/236 (33%), Gaps = 15/236 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ITRP ++A + ++ +++ G+ ++PL + +V + + + S ++
Sbjct: 1 MRVLITRPHEEAQKDRKLLEREGFSVEVLPLIRTVPLDFTV---PDEEFQFVVFASPRAV 57
Query: 61 STLPANFCRH--TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
L + + A+GE + G ++N+ ++
Sbjct: 58 EYLLKKWRPKGGEKLVAVGEKTKRKLESMGLKVWAVPQENTARGLVELLRGHS-----GK 112
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ + L + L +D Y ++ I Y + + L+ + + S+V
Sbjct: 113 VLLPRSASGREELIEGLKGGNLLLFPLDVYKTEIILYEKGKVSRALERNHVVYLASPSAV 172
Query: 179 LYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ +C+ V P +L++LL
Sbjct: 173 QGLLANLQKDQSLHLLKDKKVVCIGKTTKEEWQKETGLPALVLPKPSTEALIELLK 228
>gi|323358317|ref|YP_004224713.1| uroporphyrinogen-III synthase [Microbacterium testaceum StLB037]
gi|323274688|dbj|BAJ74833.1| uroporphyrinogen-III synthase [Microbacterium testaceum StLB037]
Length = 271
Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 36/239 (15%), Positives = 81/239 (33%), Gaps = 11/239 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R +++ G +PV+ PL F + L ++ + +T
Sbjct: 24 RVLVPRGGPWGDGVAASLRQRGAVPVIAPLINFAPTNDQATLEKALADLAAGAFDWLTLT 83
Query: 56 SSESLSTLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
S+ ++ L A T + +GE +A + G+ + ++ + + L
Sbjct: 84 SATTVDVLYAYRAEIPAETKVAVVGETTAAAMQAVGYRVDLVPERDNSAQG-MAEQMIDL 142
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN-LLQNADAIL 171
+ + ++ L + LIE +R + Y + + E + +AIL
Sbjct: 143 ESEPRKVLTLRSEIAKPVLTRLLIEAGHDVRSVVAYRTVGVPVTEKIAGDVHSGRINAIL 202
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ S + S + A + +V VA SL++ +
Sbjct: 203 VTSGSVAEQVVAQFPEIPASTVIAAIGPRTAKDAKRAGLSVDVVAEKQTVESLIEAVAR 261
>gi|256059863|ref|ZP_05450050.1| uroporphyrinogen-III synthase [Brucella neotomae 5K33]
gi|261323833|ref|ZP_05963030.1| uroporphyrinogen-III synthase [Brucella neotomae 5K33]
gi|261299813|gb|EEY03310.1| uroporphyrinogen-III synthase [Brucella neotomae 5K33]
Length = 235
Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 15/235 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP A +T K+ GY PV++PLS + +V + + A+ ITS+ +
Sbjct: 3 RVLVTRPEPAAAQTAAKLSAAGYEPVLLPLSRTVALSFTV---PDEVFDALTITSANAFR 59
Query: 62 TLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ R P+FA+GE +A A++ GF + G +++ LA + + P
Sbjct: 60 HIAPERLLPYRTLPLFAVGEGTAKAAQEAGFKHVIEGGGDAVRLAGTMRQ---ALAPTAR 116
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYARS 176
++YL G+ R FED + + + + V D Y ++ + YP + +L + A++ Y+
Sbjct: 117 VLYLAGRVRQPVFEDEVAANGLSMMVCDVYDTESVMYPPQALSRILGHAPFVAVMLYSGV 176
Query: 177 SVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ F P FLC+S +A+ +P+S+ V+ P E L +L
Sbjct: 177 AAASFVEAMRSITPPFDEKTRFLCISARVAAKLPSSWLQQALVSDHPDEKGLFRL 231
>gi|325981152|ref|YP_004293554.1| Uroporphyrinogen III synthase HEM4 [Nitrosomonas sp. AL212]
gi|325530671|gb|ADZ25392.1| Uroporphyrinogen III synthase HEM4 [Nitrosomonas sp. AL212]
Length = 261
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 73/243 (30%), Gaps = 17/243 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
I++TRP+ ++ E I G P+++P+ + L + S
Sbjct: 11 NILVTRPLHQSTFLAENIHASGGKPILLPVLEITDVTDITPLLDLINRLDEFDWAVFVSP 70
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ + I A+G+ +A R+ G ++ + ++ +++
Sbjct: 71 NAVIKSMDLITKQRALPPDLKIAAVGKGTADTLRRYGVNRVLIP-IEHFDSEALLKSEEL 129
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI- 170
+K ++ G D L + + +CY + +
Sbjct: 130 QNMTEKHVVIFRGNGGRALLGDTLAQRGAHIEYAECYLRRKPEIDSAPLLAAWSQGKIHA 189
Query: 171 -LFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ + + F + + IA A + + + LL
Sbjct: 190 VIITSSEGLHNLFDIIGTLGQQLLKTTPIFTAHDRIAQAARELGLKKIVKVPYAGDEGLL 249
Query: 226 KLL 228
K L
Sbjct: 250 KGL 252
>gi|110635530|ref|YP_675738.1| uroporphyrinogen-III synthase [Mesorhizobium sp. BNC1]
gi|110286514|gb|ABG64573.1| Uroporphyrinogen III synthase HEM4 [Chelativorans sp. BNC1]
Length = 232
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 111/234 (47%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP A RT ++ +G+ PV++PL+ + + + ++ A+AITS+ ++
Sbjct: 3 RVLVTRPEPGASRTAGRLAALGFEPVLLPLTKIVPLPVETW-SGAENIAALAITSANAVR 61
Query: 62 TLPANFCRH---TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
P R P FA+GE +A +A + G + G ++ LA+ IV P
Sbjct: 62 HTPPPLLRDLAGLPAFAVGERTAQVAAEAGVSVKDAGAGDADRLAERIV---ASVQPGSK 118
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
++ L G+ R E L +P+R I+ Y + ++ + + + +L Y+
Sbjct: 119 ILLLCGRIRRGTLESRLAAAGLPVRAIETYDTVPVSLSGDELSTEIGDRSIDAVLVYSAV 178
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ ++AAF+ +S+ +A +PA N + +A P E ++L LLP
Sbjct: 179 AATILSPFVSSF-LTAAFIAISDRVAQNLPAGLGNRIHIAREPTEDAMLSLLPK 231
>gi|238018695|ref|ZP_04599121.1| hypothetical protein VEIDISOL_00539 [Veillonella dispar ATCC 17748]
gi|237865166|gb|EEP66456.1| hypothetical protein VEIDISOL_00539 [Veillonella dispar ATCC 17748]
Length = 502
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 76/247 (30%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSE 58
IV+TR +A +EK++ G V + + + Y I TS E
Sbjct: 256 IVVTRARSQASAFREKLEAQGANVVEAAAIKTSPLELFDEDRRIINNTKQYQCIVFTSGE 315
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + ++ + AIG A+A ++ G D A +E
Sbjct: 316 GVRYFFDALYKEGKDTRALGNSKVAAIGCATARELQKYGIVPDIIPADYKAESAVEALE- 374
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ + K L H I + ++ Y + + + N L
Sbjct: 375 -EELKAGDSVLLIQPKVARDVIPRSLRHHDIDVDILRLYETTQDTSQQEALVNALTAGTV 433
Query: 170 --ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V L + + C+ A+ ++ ++
Sbjct: 434 DYITFTSSSTVTNTIQLLGDDALKLLGNTKIACIGPITAATAMSAGLKPAVISDVYTTDG 493
Query: 224 LLKLLPL 230
L+ +
Sbjct: 494 LVNAIVK 500
>gi|190893754|ref|YP_001980296.1| uroporphyrinogen-III synthase [Rhizobium etli CIAT 652]
gi|190699033|gb|ACE93118.1| uroporphyrinogen-III synthase protein [Rhizobium etli CIAT 652]
Length = 235
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 17/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A +T +++++MG+ P+++PL HD + A+ + GAIA+TS E++
Sbjct: 1 MRVLVTRPAHSAEKTAQRLREMGHEPLLLPLRRPEHDGAAAAGALAATCGAIAVTSGEAV 60
Query: 61 STLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L A + PIFA+GE +A AR+ GF + N +LA ++ Q V
Sbjct: 61 RVLSALGETLHPHLDRPIFAVGEMTAQAARRLGFRSVTASSGNGRDLADLVSAQSVED-- 118
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFY 173
L+YL G+PR FE L E I V +CY +A + + A+LFY
Sbjct: 119 ---LLYLAGRPRAETFEGRLRELGIRFSVAECYRMLPVAPGPAEIAAIFSGRHPDAVLFY 175
Query: 174 ARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R + FF + + LCLS +A AIP + VT++ P E SLL LL
Sbjct: 176 SRQTAEDFFQVAELRSALSEQGRIRLLCLSEAVAQAIPTLLRETVTISSMPDEISLLSLL 235
>gi|148251902|ref|YP_001236487.1| putative uroporphyrinogen-III synthase [Bradyrhizobium sp. BTAi1]
gi|146404075|gb|ABQ32581.1| putative uroporphyrinogen-III synthase [Bradyrhizobium sp. BTAi1]
Length = 245
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 92/243 (37%), Gaps = 15/243 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP R+ ++ G+ ++ P+ F A+ +TSS +L
Sbjct: 1 MAVLVTRPAPDNDRSATALRARGFEVLLAPMLRFEPVALPDDAGR--DAAAVIVTSSNAL 58
Query: 61 STLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV--LFT 114
R P+FA+GE +A ARQ GFTQ+ ++ L ++ ++
Sbjct: 59 RAAAPQLARSALLTLPLFAVGEHTAAAARQAGFTQVMSADGDAGALRDLVTRERANGRIK 118
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LF 172
PL+YL G + L + Y + + + L
Sbjct: 119 ADAPLLYLAGADISRDLAGELAGRGFEVITQTVYRMAPVTTLPRDVCDAFAKNAITAVLH 178
Query: 173 YARSSVLYFFSLPLPAKISAAFL-----CLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
Y+R S F + + + L C+S N+A + + VT+A P E +L+
Sbjct: 179 YSRRSAAAFVAAIRADGVEISALAVPHCCMSANVAEVLREAGATQVTIAAHPNENDMLEG 238
Query: 228 LPL 230
L
Sbjct: 239 LTR 241
>gi|326796192|ref|YP_004314012.1| uroporphyrinogen III synthase HEM4 [Marinomonas mediterranea MMB-1]
gi|326546956|gb|ADZ92176.1| Uroporphyrinogen III synthase HEM4 [Marinomonas mediterranea MMB-1]
Length = 260
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/251 (13%), Positives = 69/251 (27%), Gaps = 25/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-------LAMQQSYGAIAI 54
+++TRP + T + +G P+ +P Y E L Y +
Sbjct: 11 RVLVTRPEPENASTCAHLTSLGAQPIPLPSLYIEAFEEDDKIRSIQSQLFDLDLYKYVIF 70
Query: 55 TSSESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
S + P IG+ + GF + + S L +
Sbjct: 71 VSKNAARIGAERIEECWPMLPAQLHWIGIGKGTTKTLNDLGFPALSNPGFTSEALLNWLK 130
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
K+ + ++ + G+ D L + +++ Y Y T L +
Sbjct: 131 PVKLTD---EKILIVRGEGGRPTLADGLEAKGASVDLLELYKRIKPNYSAQTFLFLDEPD 187
Query: 168 DAILFYARSSVLYFFS---LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ S+ + + S +A + A ++ L
Sbjct: 188 LIWS-TSEDSLRNLTQDIMQYQASWLDKPIFVPSQRVADTASELGWKNIINANGADDSRL 246
Query: 225 LKL----LPLR 231
+ L +
Sbjct: 247 TEATLQHLGRK 257
>gi|219848201|ref|YP_002462634.1| Uroporphyrinogen III synthase HEM4 [Chloroflexus aggregans DSM
9485]
gi|219542460|gb|ACL24198.1| Uroporphyrinogen III synthase HEM4 [Chloroflexus aggregans DSM
9485]
Length = 254
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 77/236 (32%), Gaps = 9/236 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH------DRESVFLAMQQSYGAIAIT 55
I ITRP + +++ +G IP++ PL + + ++ +Y + +T
Sbjct: 8 RIAITRPAGRGDTLAARLRALGAIPLLTPLIAYAPPADPAPLQHALAQLAAGTYDWLVVT 67
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
S +++ L T A + ++ + + G + A + +
Sbjct: 68 SRQAVQVLAEATVPTTTAIAAVGKATAADCRRTWGREPAGVPDEELGAAL--PNVMGTLT 125
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYA 174
K ++ L + + Y + L DAI+ +
Sbjct: 126 GKRILLPCADIAPSTLTAALQAAGAIVDRVTAYRTISSPAAAELAAALRSGTIDAIVLAS 185
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
S+ +L P +C+ + A+ V +A P + +LL L
Sbjct: 186 GSAARQIPALLPPQTQCPPLVCIGPSTAAVCTELGLPVAAIAIRPNDDALLAALER 241
>gi|326391318|ref|ZP_08212858.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter
ethanolicus JW 200]
gi|325992647|gb|EGD51099.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter
ethanolicus JW 200]
Length = 497
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 75/239 (31%), Gaps = 18/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSES 59
I++TR +++ + ++ + + G V+ P +++ FL + TS
Sbjct: 254 RILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFLDNIVKFLEEIHKFDYAVFTSVNG 313
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + AIG +A ++ + +++ V
Sbjct: 314 VWSFIEASREKRFDLRNLSIKVVAIGSKTAEALENIFIYPDIIPEEYTSYSLANALKKHV 373
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAI 170
I L +E+ ++ I Y ++ + + + L+ D
Sbjct: 374 E----GKNIALLTSQIGGDILMESLENCANVQKIVAYKNEPNYEIKGNLISKLRKGIDIA 429
Query: 171 LFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+F + S+ Y L ++ + AI NV + L++
Sbjct: 430 VFTSSSTFNYMHQLIGDEINLLKNSKIAAIGPVTKKAIEDKGFNVDIMPSEYTTEKLIE 488
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/135 (11%), Positives = 34/135 (25%), Gaps = 5/135 (3%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L + + K ++ ++ + L E + V
Sbjct: 238 LRDRLKWYENKKLFGKRILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFLDNIVKFL 297
Query: 162 NLLQNADAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ D +F + + V F +S + + + A A+ + +
Sbjct: 298 EEIHKFDYAVFTSVNGVWSFIEASREKRFDLRNLSIKVVAIGSKTAEALENIFIYPDIIP 357
Query: 217 CFPKETSLLKLLPLR 231
SL L
Sbjct: 358 EEYTSYSLANALKKH 372
>gi|253995538|ref|YP_003047602.1| Uroporphyrinogen III synthase HEM4 [Methylotenera mobilis JLW8]
gi|253982217|gb|ACT47075.1| Uroporphyrinogen III synthase HEM4 [Methylotenera mobilis JLW8]
Length = 258
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 63/242 (26%), Gaps = 15/242 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
+I +TRP+ +A I + G + PL + L SS
Sbjct: 11 HIAVTRPLDQAESLNLAIAQHGGSAISFPLLAIAALDDYQAFEQQLDRVSRTDWAIFISS 70
Query: 58 ESLSTLPANFCRH------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ + FA A + + ++ ++
Sbjct: 71 NAVDYAMPRLIKKFGKIPGHLKFAAIGHQTAKALAQYGAHQVLVPHTRFDSETLLALPEL 130
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--A 169
+ + G D L + + Y + + + + A
Sbjct: 131 QDVSAQTIAIFRGVGGRELMADTLKARGADVYFAESYRRINPQHNADLLAAQWRQNQLDA 190
Query: 170 ILFYARSSVLYFFSLP--LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
++ + ++ Y L IA V VA P + ++L+
Sbjct: 191 VIVTSSEAMRYLLQLAAHAEWLTHVTLCVNHERIAEQPRQLGLK-VLVASAPGDEAMLQC 249
Query: 228 LP 229
L
Sbjct: 250 LA 251
>gi|291569357|dbj|BAI91629.1| bifunctional uroporphyrinogen-III
C-methyltransferase/uroporphyrinogen-III synthase
[Arthrospira platensis NIES-39]
Length = 511
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 70/250 (28%), Gaps = 24/250 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ-------QSYGAIAIT 55
I++TR +++ + +++ G + MP L + + + +T
Sbjct: 258 ILVTRSSEQSNEFRSLLEQKGAEVLEMPTLMIRPPSTWEPLDQAIAFSDTSKPFDWLLLT 317
Query: 56 SSESLSTLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
S+ ++S + I ++ A + +A +VE
Sbjct: 318 SANAVSFFFERLLANGKDTRILASTKIAVVGKKTAMVLRQWGLNPDFIPPDFIADSLVEN 377
Query: 110 KVLFTPQKPLIYLGGKP-RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-- 166
K L++ + L + + + Y S + +++ L+N
Sbjct: 378 FPESVSGKRLLFPRVETGGREILVKELTQAGAEVVEVPAYESACPDTIDPNVQSALENGI 437
Query: 167 ADAILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
F + +V F L A + + V A
Sbjct: 438 ISIATFTSSKTVKNFCKLLEGFAGDSWRDLVTGVAIASIGPQTSQTCQTLLGRVDIEAQE 497
Query: 219 PKETSLLKLL 228
L + +
Sbjct: 498 YTLEGLTQAI 507
>gi|198284967|ref|YP_002221288.1| Uroporphyrinogen-III synthase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666649|ref|YP_002427652.1| uroporphyrinogen-III synthase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198249488|gb|ACH85081.1| Uroporphyrinogen-III synthase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518862|gb|ACK79448.1| uroporphyrinogen-III synthase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 262
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 72/243 (29%), Gaps = 19/243 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
IV+TRP + ++ G P++ P L +Y + +S
Sbjct: 11 IVVTRPRAQTGEMLTLLEAQGARPILFPAVEIEAPENWQSLDDALHRLVTYDWVIFSSRN 70
Query: 59 SLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+++ + I A+G +A + G + S ++ ++
Sbjct: 71 AVAFALSRLQSRNLSWPVGPRIAAVGRETAKALGEFGLQVDLVPRRFSS--EGLLESPEL 128
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DA 169
L + + G E L E + CY + T + + DA
Sbjct: 129 LDVRGQRIALFAGDQGRELLEKTLDERGAVTDEVLCYRRRLPGTNPTPLLHAWARGELDA 188
Query: 170 ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ + F+ + + + +S A A+ A +A +L
Sbjct: 189 VTVTSPEIFNNFYQMVGGLGQRWLKNTPIIAISPLTAEAVTAVGLPTPWIAPEASTAGML 248
Query: 226 KLL 228
L
Sbjct: 249 AAL 251
>gi|297537268|ref|YP_003673037.1| Uroporphyrinogen III synthase HEM4 [Methylotenera sp. 301]
gi|297256615|gb|ADI28460.1| Uroporphyrinogen III synthase HEM4 [Methylotenera sp. 301]
Length = 260
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 72/242 (29%), Gaps = 15/242 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
++ +TRP+ +A E IQ G + PL + A + S+
Sbjct: 11 HVAVTRPVDQAESICEAIQHHGGDAISFPLLAISPLDDYHEFENVIADLEQADWAIFIST 70
Query: 58 ESL-STLPANFCRHTPI-----FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ ++LP + + FA + ++ ++
Sbjct: 71 NAVDNSLPRILKKFGNVPENLKFAAIGHQTAKELSLYGVHQVLIPHTRFDSETLLALAEM 130
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--A 169
K ++ G + L + +CY + + + Q A
Sbjct: 131 HDVENKNIVIFRGVGGRDMLANTLKSRGANVTFAECYRRINPQTDAQFLNSEWQQGHLNA 190
Query: 170 ILFYARSSVLYFFSLPLP-AKISAAFLCL-SNNIASAIPASYKNVVTVACFPKETSLLKL 227
++ + ++ + + LC+ IA V V P + +++K
Sbjct: 191 VIVTSSEAMRNLLDIAGESEWLRRVTLCVNHARIAEQPLQLGFK-VLVTEAPGDDAMIKC 249
Query: 228 LP 229
L
Sbjct: 250 LS 251
>gi|157960201|ref|YP_001500235.1| uroporphyrinogen III synthase HEM4 [Shewanella pealeana ATCC
700345]
gi|157845201|gb|ABV85700.1| Uroporphyrinogen III synthase HEM4 [Shewanella pealeana ATCC
700345]
Length = 243
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 67/242 (27%), Gaps = 12/242 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSS 57
M I++TRP + +E + + + PL + + I S+
Sbjct: 1 MKILLTRPEGRNQLMKEALTQRNVSYFITPLLNVQPTSNLDANQIDKQLKLADIIIFIST 60
Query: 58 ESLSTLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+++ P A + A ++ ++ ++ +
Sbjct: 61 NAVAFASQAIDNQWPSSAQYFAVGDATHAALKQLGIDAQRAPEDCQQTEGLLTLTSLADV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K +I + G+ LI+ L + Y A + ++ I+
Sbjct: 121 TGKQIIIVRGQGGREDLATELIKRNAQLSYWEVYKRGCPALDSANLCQQWRSFGIDTIII 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + + S + A V+ A ++L L
Sbjct: 181 TSGEILDNLIKTVPKELFAWLQTCHIIVPSPRVYEKAKAYNLLHVSNATAANTNAMLAAL 240
Query: 229 PL 230
L
Sbjct: 241 SL 242
>gi|220933220|ref|YP_002512119.1| Uroporphyrinogen-III synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|219994530|gb|ACL71132.1| Uroporphyrinogen-III synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 272
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 67/241 (27%), Gaps = 16/241 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+++TRP +A I++ G +P+ P+ + R+ + ++ S
Sbjct: 18 VLVTRPAHQAEVFCRMIEQAGGVPLRFPVLEILEPRDSGRLDALIDRLDAFDIAIFISPN 77
Query: 59 SLSTLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
++S P A + + ++ E ++
Sbjct: 78 AVSMAVNRIHARRPWPEHLRIGAVGQKSAQELARAGHPAHICPPRRFDSEALLEEPELQD 137
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
K ++ G D L E + + Y + + L
Sbjct: 138 VAGKRIVIFRGDGGRELLGDTLKERGAVVEYAEAYRRGRPDADTGKLMIHWSRGELHLVT 197
Query: 174 ARSS--VLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVV-TVACFPKETSLLK 226
+ SS + F + L + + N VA P + S+++
Sbjct: 198 STSSEGLRNLFDMVGKLGRMWLRKTPLLVGAPRMVETARELGFNGDPWVAEDPSDESMMQ 257
Query: 227 L 227
Sbjct: 258 A 258
>gi|186682270|ref|YP_001865466.1| uroporphyrin-III C-methyltransferase [Nostoc punctiforme PCC 73102]
gi|186464722|gb|ACC80523.1| uroporphyrin-III C-methyltransferase [Nostoc punctiforme PCC 73102]
Length = 529
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 67/251 (26%), Gaps = 27/251 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
I++TR + ++ +++ +G + MP L + + +TSS
Sbjct: 274 ILVTRSVGQSSTFSDRLTTLGATVIEMPTLEIGPPSSWEALDDAIAHLSQFDWLILTSSN 333
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I +GE +A +Q F + + +I
Sbjct: 334 GIDYFFERLIAQGKDTRALAGVKIAVVGEKTANSLKQYSLQPDFIPPNFVADS--LIENF 391
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNA 167
+K L L + + Y S + + N
Sbjct: 392 PEKLDGKKVLFPRVESGGREILVKELTLKGAKVIEVAAYQSCCPSSIPSGAELALQNHNV 451
Query: 168 DAILFYARSSVLYFFSL----------PLPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
+ I F + +V +F+ L + + + + V A
Sbjct: 452 NVITFASSKTVQFFYQLTEKIFSQNSDVSQLLENVCIASIGPQTSKTCHDLFGRVDVEAQ 511
Query: 218 FPKETSLLKLL 228
L + L
Sbjct: 512 EYTLDGLTQAL 522
>gi|37520803|ref|NP_924180.1| uroporphyrinogen III synthase/methyltransferase [Gloeobacter
violaceus PCC 7421]
gi|35211798|dbj|BAC89175.1| uroporphyrinogen III synthase/methyltransferase [Gloeobacter
violaceus PCC 7421]
Length = 508
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 69/247 (27%), Gaps = 20/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
+I++TR +A +++ +G + MP +A Y + +TS+
Sbjct: 246 HILVTRAADQAGGFSAQLEALGASVLEMPALVVTAPTSWEPLDRAIAQLAGYRWLLLTSA 305
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ A H + A+G +A AR G F +
Sbjct: 306 NGVEAFFARLTHHRRDLRALGGVRVAAVGPKTAQAARTHGLICDFVPGQYVSDGLLTDFP 365
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--N 166
++ L + + + Y + E L+
Sbjct: 366 DIAGIYGERVLFVRVESGGRETITEQFRRWGALVDEVAGYATGCPDSAEPGCVAALRAGR 425
Query: 167 ADAILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
D F + +V +F L ++ + ++A + V A
Sbjct: 426 IDCATFASAKTVRHFARLLQGEELESLLRKVRIASIGPQTSAACRETLGRVDVEAEVFTL 485
Query: 222 TSLLKLL 228
L + +
Sbjct: 486 DGLAQAI 492
>gi|284049932|ref|ZP_06380142.1| uroporphyrinogen III methylase [Arthrospira platensis str. Paraca]
Length = 511
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 70/250 (28%), Gaps = 24/250 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ-------QSYGAIAIT 55
I++TR +++ + +++ G + MP L + + + +T
Sbjct: 258 ILVTRSSEQSNEFRSLLEQKGAEVLEMPTLMIRPPSTWEPLDQAIAFSDTSKPFDWLLLT 317
Query: 56 SSESLSTLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
S+ ++S + I ++ A + +A +VE
Sbjct: 318 SANAVSFFFERLLANGKDTRILASTKIAVVGKKTAMVLRQWGLNPDFIPPDFIADSLVEN 377
Query: 110 KVLFTPQKPLIYLGGKP-RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-- 166
K L++ + L + + + Y S + +++ L+N
Sbjct: 378 FPESVSGKRLLFPRVETGGREILVKELTQAGAEVVEVPAYESACPDTIDPNVQSALENGI 437
Query: 167 ADAILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
F + +V F L A + + V A
Sbjct: 438 ISIATFTSSKTVKNFCKLLEGFAGDSWRDLVTGVAIASIGPQTSQTCQTLLGRVDIEAQE 497
Query: 219 PKETSLLKLL 228
L + +
Sbjct: 498 YTLEGLTQAI 507
>gi|87118401|ref|ZP_01074300.1| uroporphyrinogen-III synthetase [Marinomonas sp. MED121]
gi|86166035|gb|EAQ67301.1| uroporphyrinogen-III synthetase [Marinomonas sp. MED121]
Length = 253
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 75/245 (30%), Gaps = 19/245 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-----QQSYGAIAITS 56
+I+ITRP + + E+ Q G + +P+ E Y + S
Sbjct: 7 HILITRPEPENTLSCERFQTWGAHSLSLPMIEIDALTEQNAAIQSHIFDLDLYDQVIFIS 66
Query: 57 SESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDN---SINLAKII 106
++ P IG+ + + GF +++ ++
Sbjct: 67 KNAVRYGIEWIEDCWPMLPVGINWVGIGKGTTDFINELGFDLGIKAQEHALSGNTSEALL 126
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
++ + + ++ +GG+ + L+E ++ + Y I Y + +N
Sbjct: 127 NQESMQKVAGQKILIMGGEGGRTKLAETLLERGAQVKHLALYSRNKINYDLEQVAE-AEN 185
Query: 167 ADAILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ IL + + + L S +A V A + S
Sbjct: 186 CEVILITSGEGLENLVDTLSQHNKNWLHKLILTPSQRVADMAIELGWKNVVNANGADDNS 245
Query: 224 LLKLL 228
+ L
Sbjct: 246 IYAAL 250
>gi|224137378|ref|XP_002327111.1| predicted protein [Populus trichocarpa]
gi|222835426|gb|EEE73861.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/244 (14%), Positives = 78/244 (31%), Gaps = 17/244 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+V+TR K + + + K G + +PL +S L+ ++ I +TS
Sbjct: 47 KVVVTRERGKNGKLIKALAKYGISCLELPLIQHTQGPDSDKLSSVLCADSAFDWIIVTSP 106
Query: 58 ES----LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK----IIVEQ 109
E+ L + +G +A + + + + E
Sbjct: 107 EAGSVFLEAWKVAGTPKVKLGVVGAGTASIFEEVMQSSERSLDVAFTPSKATGKVLASEL 166
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ ++Y + E L + ++ Y + + + + + +A
Sbjct: 167 PRNGNKRCTVLYPASAKASNEIEQGLYNRGFEVVRLNTYTTVPVGHVDEMVLKQAISAPV 226
Query: 170 ILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKET----SL 224
+ + SSV + +L + + + C+ SA V P S+
Sbjct: 227 VAVASPSSVRAWANLIPESEEWNNSVACIGETTGSAAKRLGFKKVYFPRQPGLEGWVDSI 286
Query: 225 LKLL 228
L+ L
Sbjct: 287 LEAL 290
>gi|167625823|ref|YP_001676117.1| uroporphyrinogen III synthase HEM4 [Shewanella halifaxensis
HAW-EB4]
gi|167355845|gb|ABZ78458.1| Uroporphyrinogen III synthase HEM4 [Shewanella halifaxensis
HAW-EB4]
Length = 243
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 65/243 (26%), Gaps = 12/243 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSS 57
M +++TRP + E + K + PL + I S+
Sbjct: 1 MKVLLTRPEGRNQLMAEALTKRNVSYFITPLLNVQPTSNLDAQQIDMTLKQADIIIFIST 60
Query: 58 ESLSTLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++S P A + A ++ ++ +
Sbjct: 61 NAVSFASKAINNQWPTSAHYLAVGDATHAALSDIGLDAEKAPEDCQQTEGLLTLPTLTQV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ + G+ L + + L + Y A + Q+ I+
Sbjct: 121 NGKNILIVRGQGGREDLATELTKRQARLNYWEVYKRGCPALDAACLCQQWQSFGIDTIII 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + + S+ + A ++ A ++L L
Sbjct: 181 TSGEILDNLVKTVPKELFAWLQTCHIIVPSSRVYEKAKAYGLVQISNATAANTNAMLATL 240
Query: 229 PLR 231
L+
Sbjct: 241 SLK 243
>gi|220928705|ref|YP_002505614.1| uroporphyrin-III C-methyltransferase [Clostridium cellulolyticum
H10]
gi|219999033|gb|ACL75634.1| uroporphyrin-III C-methyltransferase [Clostridium cellulolyticum
H10]
Length = 504
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 84/244 (34%), Gaps = 21/244 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
+++TRP + EK++++G P+ P + ++ L YG I TS
Sbjct: 255 KVLVTRPKASSSTIVEKLRQLGAEPLEYPCIEVVPIPQNEKLCSVCEKLSEYGWILFTSK 314
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIV 107
+ + I +G +A ++ G F + + +LA+ +
Sbjct: 315 NGIQIFFDYLNSQGLDARVLANIKIGTVGSQTARALKEVGLISDFTPEIFDGSHLAQGVS 374
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + ++ + + + I + Y++ I ++ ++ +
Sbjct: 375 QLVGEN---EKVLICDAAIASDDIVNIFNNNNIKFDRVPLYHTNYINENSDEIRKMIIDG 431
Query: 168 --DAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I F + S+V F + + S +C+ N A A V ++ S+
Sbjct: 432 ELKYITFTSASTVEGFMASVKDIPLGSLTAVCIGNQTAQAAKKYNLTYV-ISEKSTIDSI 490
Query: 225 LKLL 228
L
Sbjct: 491 TDKL 494
>gi|154496816|ref|ZP_02035512.1| hypothetical protein BACCAP_01109 [Bacteroides capillosus ATCC
29799]
gi|150274068|gb|EDN01168.1| hypothetical protein BACCAP_01109 [Bacteroides capillosus ATCC
29799]
Length = 496
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 77/241 (31%), Gaps = 22/241 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSE 58
+V+TRP ++A +++ MG V P + L Y + TS+
Sbjct: 255 VVVTRPKERAGTLAPRLRAMGAQVVEYPCIETVPILPCPAMEAALNAISGYEWLVFTSAA 314
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ T+ + AIG +A +G + +
Sbjct: 315 GVETVWHTLEAMGKDARALGSVKLAAIGPGTAKALLTRGLRADYVPEVYDAAHLG----A 370
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ Q ++ L + + D L KI I Y + +++ L +
Sbjct: 371 GLAGLTQGKVLLLRAELGSKALTDALDGAKISYDDIAVYRTLYDNPRSEELRDRLLAEEG 430
Query: 170 IL--FYARSSVLYFFSLPLPAKISAAF--LCLSNNIASAIPASYKNVVTVACFPKETSLL 225
L F + S+V F S + +C+ A+ VV VA S++
Sbjct: 431 TLVTFTSASTVKGFVSTVGEDFLFDRITGVCIGEQTAAQAKDYGIPVV-VAERATIDSMV 489
Query: 226 K 226
+
Sbjct: 490 E 490
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 31/136 (22%), Gaps = 8/136 (5%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
LA L + ++ K R L + C + I
Sbjct: 238 LADKFDWFDSLPLKGRTVVVTRPKERAGTLAPRLRAMGAQVVEYPCIETVPILPCPAMEA 297
Query: 162 N--LLQNADAILFYARSSVLYFFSLPLP------AKISAAFLCLSNNIASAIPASYKNVV 213
+ + ++F + + V + A S + A A+
Sbjct: 298 ALNAISGYEWLVFTSAAGVETVWHTLEAMGKDARALGSVKLAAIGPGTAKALLTRGLRAD 357
Query: 214 TVACFPKETSLLKLLP 229
V L L
Sbjct: 358 YVPEVYDAAHLGAGLA 373
>gi|332363839|gb|EGJ41618.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK355]
Length = 241
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 69/226 (30%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A+ + TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQSGFETHHVPLIRCQSLPLPEAVQAILSEADWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ I IG ++ + + + +S I E L P + ++
Sbjct: 64 EAFSSYLKADHQIATIGPQTSQALDK--LGRACDFESSSHYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHEVWAWPMYETTSNPAGQDQLETYLSQKDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLATSHQIAVIGQTTAQAVKGSGYRVDYQPQSPSVEEMV 227
>gi|303229229|ref|ZP_07316025.1| uroporphyrinogen-III C-methyltransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516084|gb|EFL58030.1| uroporphyrinogen-III C-methyltransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 504
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 76/247 (30%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSE 58
IV+TR +A + ++ + G + + L Y + TS+E
Sbjct: 256 IVVTRARSQASKFRDMLMNQGANVIQAAAIKTEPVELFDEDKRLLHGVDRYSCVVFTSAE 315
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + + AIG A+A G T D ++Q
Sbjct: 316 GVRYFFDALYGEGKDARSLGYAKVCAIGSATAKALTNYGITPDIIPVDYKAESVVDALKQ 375
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V ++ + K L I + ++ Y +Q + + + LQ+
Sbjct: 376 HVKAGD--TVLLIQPKKAREVIPRELRHLDIDVDILRLYETQQDTSQQEALVDALQHGHV 433
Query: 170 --ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V L +S C+ A+ ++ V ++
Sbjct: 434 DYITFTSSSTVTNTLELLGEDALSLLEHTKIACIGPITAATAMSAGLKVDIISPVYTTEG 493
Query: 224 LLKLLPL 230
L+ +
Sbjct: 494 LVDTIVK 500
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 41/139 (29%), Gaps = 8/139 (5%)
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-- 158
NL + + K ++ + + F D L+ + ++ + +
Sbjct: 238 NLREQLQWFDNKPLFGKTIVVTRARSQASKFRDMLMNQGANVIQAAAIKTEPVELFDEDK 297
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNV 212
+ + + ++F + V YFF A + + A A+
Sbjct: 298 RLLHGVDRYSCVVFTSAEGVRYFFDALYGEGKDARSLGYAKVCAIGSATAKALTNYGITP 357
Query: 213 VTVACFPKETSLLKLLPLR 231
+ K S++ L
Sbjct: 358 DIIPVDYKAESVVDALKQH 376
>gi|220910197|ref|YP_002485508.1| uroporphyrin-III C-methyltransferase [Cyanothece sp. PCC 7425]
gi|219866808|gb|ACL47147.1| uroporphyrin-III C-methyltransferase [Cyanothece sp. PCC 7425]
Length = 520
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/261 (13%), Positives = 66/261 (25%), Gaps = 31/261 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSE 58
+++TR ++A +++ + G + MP +A + + +TS+
Sbjct: 257 VLVTRATEQAGEFSDRLGQSGARVLEMPALEIGPPSSWQPLDAAIADLSQFDWLILTSAN 316
Query: 59 SLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I +G +A QKG F D +
Sbjct: 317 GVEAFIERLLAVGKDTRSLQGVQIAVVGRKTAACLAQKGLRPDFMPPDFIADALVSHFPD 376
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
+ L + + Y S+ A + LQ
Sbjct: 377 YEYLQGMRLLFPRVETGGRETLVSAFTAKGATVVEVPAYESRCPAAIAPPILTALQTRQV 436
Query: 168 DAILFYARSSVLYFFSLP----------LPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
D I F + +V F +L + + A V A
Sbjct: 437 DIITFASSKTVQNFCALLKQATNSESEWQDWLQGVWIASIGPQTSKACQQLLGRVDVEAQ 496
Query: 218 FPKETSLLKLL------PLRR 232
L + + RR
Sbjct: 497 EYTLAGLAEAIVDACRSGRRR 517
>gi|166368278|ref|YP_001660551.1| uroporphyrinogen-III C-methyltransferase and uroporphyrinogen-III
synthase fusion protein [Microcystis aeruginosa
NIES-843]
gi|166090651|dbj|BAG05359.1| uroporphyrinogen-III C-methyltransferase and uroporphyrinogen-III
synthase fusion protein [Microcystis aeruginosa
NIES-843]
Length = 505
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 73/250 (29%), Gaps = 26/250 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSE 58
IVITR ++ + E +Q G + MP +A Q + + +TS+
Sbjct: 252 IVITRAAEQTSQFSEILQNQGAEVLEMPALEIRPPDRWQGLDDAIAQLQEFDWLILTSAN 311
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+++ I +G+ ++ + +G F D + ++ E
Sbjct: 312 AVNFFFDRLTFWGKDARALATVKIAVVGKKTSQVLHSRGLKADFIPGDFVAD--ALVNEF 369
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
QK L L + + YYS A ++ + +
Sbjct: 370 PDPIRGQKFLFPRVETGGREVLVKELTAKAGQVTEVAAYYSGCPARMDSQIWEAFRDEKV 429
Query: 168 DAILFYARSSVLYFFSLPLPA---------KISAAFLCLSNNIASAIPASYKNVVTVACF 218
D + F + +V F+ L L + + + V A
Sbjct: 430 DIVTFASSKTVQNFYQLLLQETAELSVNSLLEKVCLASIGPQTSKTCQELFGRVDIEARE 489
Query: 219 PKETSLLKLL 228
L L
Sbjct: 490 YTLEGLTSAL 499
>gi|53802805|ref|YP_115448.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Methylococcus capsulatus str. Bath]
gi|53756566|gb|AAU90857.1| uroporphyrinogen-III synthase/uroporphyrin-III C-methyltransferase
[Methylococcus capsulatus str. Bath]
Length = 672
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 83/244 (34%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M +++TRP ++A I+ G V PL + + L + S
Sbjct: 1 MRVLVTRPKEQAEPLCRLIETAGGKAVRFPLLDIEPSAQAEEGAALLRQASDWDWWIFVS 60
Query: 57 SESLSTLP-----ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+++ I AIG+A+A G + + N ++ +
Sbjct: 61 VNAVNRARALDVLRPDGAGPRIAAIGKATADALVDGGIAVDLVPE-SQANSEGLLETPPM 119
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADA 169
+ ++ + G+ ++ L+E ++ + Y + + L+ D
Sbjct: 120 RDVAGRRILIVRGEGGRETLKERLVERGALVQYAELYRRVPVHTGAEALIEGLRTAGLDM 179
Query: 170 ILFYARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ + ++ + + L P + + +S + + + V VA + ++L
Sbjct: 180 LTATSGEAIEHLYRLVPPEDRPRLVETPLVVISERLKNQAGSLGFRHVKVADAASDAAVL 239
Query: 226 KLLP 229
+ L
Sbjct: 240 QALE 243
>gi|256751189|ref|ZP_05492070.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter
ethanolicus CCSD1]
gi|256749914|gb|EEU62937.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter
ethanolicus CCSD1]
Length = 497
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 28/239 (11%), Positives = 73/239 (30%), Gaps = 18/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I++TR +++ + ++ + + G V+ P +++ L + TS
Sbjct: 254 RILLTRTYEQSQQMKKILSEKGADVVVCPTIKITPFLDNIEMFLEEIHKFDYAVFTSVNG 313
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + AIG +A ++ + +++ V
Sbjct: 314 VLSFIEAVREKRFDLRNLTVKVVAIGSKTAEALENIFIYPDIIPEEYTSYSLANALKKHV 373
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAI 170
I L + + ++ I Y ++ + + + L+ D
Sbjct: 374 E----GKNIALLTSQIGGDILMESLGNCANVQKIVAYKNEPNYEIKEKLISELRKGIDIA 429
Query: 171 LFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+F + S+ Y L ++ + AI +V + L++
Sbjct: 430 VFTSSSTFNYMHQLIGDEINLLKNSKIAAIGPVTKKAIEDKGFDVDIMPSEYTTEKLIE 488
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/135 (11%), Positives = 35/135 (25%), Gaps = 5/135 (3%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L + + K ++ ++ + L E + V
Sbjct: 238 LRDRLKWYENKKLFGKRILLTRTYEQSQQMKKILSEKGADVVVCPTIKITPFLDNIEMFL 297
Query: 162 NLLQNADAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ D +F + + VL F ++ + + + A A+ + +
Sbjct: 298 EEIHKFDYAVFTSVNGVLSFIEAVREKRFDLRNLTVKVVAIGSKTAEALENIFIYPDIIP 357
Query: 217 CFPKETSLLKLLPLR 231
SL L
Sbjct: 358 EEYTSYSLANALKKH 372
>gi|75674670|ref|YP_317091.1| uroporphyrinogen III synthase HEM4 [Nitrobacter winogradskyi
Nb-255]
gi|74419540|gb|ABA03739.1| uroporphyrinogen III synthase HEM4 [Nitrobacter winogradskyi
Nb-255]
Length = 248
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 98/241 (40%), Gaps = 15/241 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP T ++ MG ++ P+ F + + +YGA+ +TS+ +L
Sbjct: 1 MAVLVTRPEPDNETTASALRAMGREALLSPVLRFE--AAAFEIDRGANYGAVIVTSANAL 58
Query: 61 STLPANFCRHTP----IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK--VLFT 114
L + + +FA+G +A AR+ GF + ++ L ++IV++
Sbjct: 59 RALAVHPGIESLLKLAVFAVGRHTAEAARRVGFQDVVAAAGDAAALCELIVKRVRAKSLP 118
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
++YL R+ L H + + CY +A + + +L
Sbjct: 119 KGARILYLAAADRSCDLAGKLEGHGLAVVTTTCYRMAPVASLSREVCDAFAAHRISAVLH 178
Query: 173 YARSSVLYFFSLPLPAKISAAFL-----CLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
Y+R S F + + L C+S +AS + + V A P E ++L+
Sbjct: 179 YSRRSARAFLDAVRIGGVEISALAVPQCCISGAVASVLRDAGAPHVVEASAPAEEAVLEA 238
Query: 228 L 228
L
Sbjct: 239 L 239
>gi|324993557|gb|EGC25477.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK405]
gi|324995131|gb|EGC27043.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK678]
gi|327458926|gb|EGF05274.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK1057]
gi|327461830|gb|EGF08161.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK1]
gi|327473566|gb|EGF18986.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK408]
Length = 241
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 66/226 (29%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A+ + TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQAGFETHHVPLIRCQSLPLPEAVQAVLPEVDWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L P + ++
Sbjct: 64 EAFSPYLKADFQIATIGPQTSQALDKLGRACDFQASS--HYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHEVWAWPMYETTSNPAGQDQLETYLSQEDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQAVKESGYGVDYQPQSPSVEEMV 227
>gi|253997746|ref|YP_003049809.1| Uroporphyrinogen III synthase HEM4 [Methylovorus sp. SIP3-4]
gi|253984425|gb|ACT49282.1| Uroporphyrinogen III synthase HEM4 [Methylovorus sp. SIP3-4]
Length = 267
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 68/242 (28%), Gaps = 17/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+ ITRP+ +A R I + G P PL + L Y SS
Sbjct: 16 VAITRPLDQATRLSRLIVEAGGTPYGFPLIEIAPLADYSAFDAQLHELGKYDWTIFISSN 75
Query: 59 SLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ T A + ++ ++
Sbjct: 76 AVQNAIPRMLNLVGQPPATLRHAAIGPVTAAELTSLGIGPVLTPQGRYDSESLLALPEMQ 135
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AI 170
+ + G + L + +CY + ++ Q A+
Sbjct: 136 QVKGQRFLIFRGVGGRELLAESLRARGATVDFAECYRRINPQTSAEPLEQRWQQQQLDAV 195
Query: 171 LFYARSSVLYFFSLPLPAKISAA---FLCL-SNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + ++ + ++ + + LC+ IA V VA P + ++L+
Sbjct: 196 VVTSSEAMRHLLNMTNNGQHAWIRDVTLCVNHARIAELPIELGL-HVIVAEAPGDDAMLQ 254
Query: 227 LL 228
L
Sbjct: 255 CL 256
>gi|284929508|ref|YP_003422030.1| uroporphyrinogen-III synthase /uroporphyrinogen-III
C-methyltransferase [cyanobacterium UCYN-A]
gi|284809952|gb|ADB95649.1| uroporphyrinogen-III synthase /uroporphyrinogen-III
C-methyltransferase [cyanobacterium UCYN-A]
Length = 504
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 76/252 (30%), Gaps = 32/252 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
++ITR + + + + ++Q+ G + +PL + L S+ + +TS+
Sbjct: 247 KVIITRSHESSSQFKFQLQEAGADVITLPLLEILPPSSWERLDGAIQEISSFDWLVLTSA 306
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + I +G+ +A ++ F +A +VE
Sbjct: 307 NGVKFFMERLHDLGKDIRILNNIKIAVVGKKTADYLKKFYLKPNFIPS---DFIADSLVE 363
Query: 109 QKVLFTPQKPLIYLGGKPRNFHF-EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
K +++ + I+ + + Y S + + +L+N
Sbjct: 364 NFPEDINGKKILFPRVETGGRDILLKEFIKKGASITEVPAYQSICPKNIDNEIWKILKNE 423
Query: 168 D--AILFYARSSVLYFFSLPLP-------------AKISAAFLCLSNNIASAIPASYKNV 212
I F + V +F+ L + C+ + + V
Sbjct: 424 QVDIITFTSSKIVKHFYHLFKNIFPDSIEEKKILSKLDNVYLACIGPQTSKTCNDLFGRV 483
Query: 213 VTVACFPKETSL 224
A L
Sbjct: 484 DVEAKEYTLEGL 495
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 13/118 (11%), Positives = 32/118 (27%), Gaps = 8/118 (6%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILFYA 174
K +I + F+ L E + + + E + + D ++ +
Sbjct: 246 KKVIITRSHESSSQFKFQLQEAGADVITLPLLEILPPSSWERLDGAIQEISSFDWLVLTS 305
Query: 175 RSSVLYFFSLPLPAKI------SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ V +F + + A + Y + SL++
Sbjct: 306 ANGVKFFMERLHDLGKDIRILNNIKIAVVGKKTADYLKKFYLKPNFIPSDFIADSLVE 363
>gi|23099522|ref|NP_692988.1| uroporphyrinogen-III synthase [Oceanobacillus iheyensis HTE831]
gi|22777751|dbj|BAC14023.1| uroporphyrinogen-III synthase [Oceanobacillus iheyensis HTE831]
Length = 252
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 81/235 (34%), Gaps = 11/235 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSESL 60
++ITR ++A ++I+ G P+++PL + + + + Y I TSS +
Sbjct: 10 VLITREKQQAEAFAKQIENFGGKPLVVPLLSIEYKSDISNPIWLHLKKYEWILFTSSNGV 69
Query: 61 STLPANFCR-------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + +G + + F E +
Sbjct: 70 HGFFHFLHQLDIEFPSDIKVGIVGTKTKLALDEYELKPDFIPSIFDAETMA--KEFIESY 127
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++P++ + G + EH I I+ Y + + +++ ++N D +
Sbjct: 128 DREQPILIVRGNLSRNIIPNDFTEHNISYDTIEVYETTYRYEAKRELEDTIKNVDFVTLT 187
Query: 174 ARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V L S ++C+ + + + ++++++
Sbjct: 188 SPSTVTALMKLVKDIPFSCDYICIGTTTEAKAEKLQIPNLHIPSEFTTDAMIEVM 242
>gi|313893047|ref|ZP_07826624.1| uroporphyrinogen-III C-methyltransferase [Veillonella sp. oral
taxon 158 str. F0412]
gi|313442400|gb|EFR60815.1| uroporphyrinogen-III C-methyltransferase [Veillonella sp. oral
taxon 158 str. F0412]
Length = 502
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 75/247 (30%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSE 58
IV+TR +A +EK+ G V + + + Y I TS E
Sbjct: 256 IVVTRARSQASAFREKLAAQGANVVEAAAIKTSPLELFDEDRRIINNTKQYQCIVFTSGE 315
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + ++ + AIG A+A ++ G D A +E
Sbjct: 316 GVRYFFDALYKEGKDTRALGNSKVAAIGCATARELQKYGIVPDIIPVDYKAESAVEALE- 374
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ + K L H I + ++ Y + + + N L
Sbjct: 375 -EELKAGDSVLLIQPKVARDVIPRSLRHHDIDVDILRLYETTQDTSQQEALVNALTAGTV 433
Query: 170 --ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V L + + C+ A+ ++ ++
Sbjct: 434 DYITFTSSSTVTNTIQLLGDDALKLLGNTKIACIGPITAATAMSAGLKPAVISDVYTTDG 493
Query: 224 LLKLLPL 230
L+ +
Sbjct: 494 LVNAIVK 500
>gi|218673005|ref|ZP_03522674.1| uroporphyrinogen-III synthase [Rhizobium etli GR56]
Length = 235
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 17/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A T ++++ MG+ P+++PL HD + A+ + AIA+TS+E++
Sbjct: 1 MRVLVTRPAHSAETTAQRLRDMGHEPLLLPLRRPQHDSAAAAGALAATSCAIAVTSAEAM 60
Query: 61 STLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L A PIFA+GE +A AR+ GF + N +LA ++ Q
Sbjct: 61 RVLSALGETLGPHLDRPIFAVGEMTAQAARRLGFRSVTASSGNGRDLADLVAAQ-----K 115
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFY 173
+ L+YL G PR FE L E I V +CY Q +A ++ + DA+LFY
Sbjct: 116 TEALLYLAGLPRAETFEGRLRELGIRFSVAECYRMQPVAPGPADIEAIFLGHRPDAVLFY 175
Query: 174 ARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R + FF + + LCLS +A AIP K VT++ P E SLL LL
Sbjct: 176 SRQTAEDFFQVAELRSALLEQGGIRLLCLSEAVAQAIPTFLKGSVTISPMPDEISLLSLL 235
>gi|303230541|ref|ZP_07317295.1| uroporphyrinogen-III C-methyltransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|302514782|gb|EFL56770.1| uroporphyrinogen-III C-methyltransferase [Veillonella atypica
ACS-049-V-Sch6]
Length = 504
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 78/247 (31%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSE 58
IV+TR +A + ++ + G + + L Y + TS+E
Sbjct: 256 IVVTRARSQASKFRDMLMNQGANVIQAAAIKTEPVELFDEDKRLLHGVDRYSCVVFTSAE 315
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + + AIG A+A G T D ++Q
Sbjct: 316 GVRYFFDALYGEGKDARSLGYAKVCAIGSATAKALTNYGITPDIIPVDYKAESVVEALKQ 375
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V P+ ++ + K L I + ++ Y +Q + + + LQ+
Sbjct: 376 HV--KPRHTVLLIQPKKAREVIPRELRHLDIAVDILRLYETQQDTSQQEALVDALQHGHV 433
Query: 170 --ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V L +S C+ A+ ++ V ++
Sbjct: 434 DYITFTSSSTVTNTLDLLGEDALSLLEHTKIACIGPITAATAMSAGLKVDIISPVYTTEG 493
Query: 224 LLKLLPL 230
L+ +
Sbjct: 494 LVDTIVK 500
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 42/139 (30%), Gaps = 8/139 (5%)
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-- 158
NL + + K ++ + + F D L+ + ++ + +
Sbjct: 238 NLREQLQWFDNKPLFGKTIVVTRARSQASKFRDMLMNQGANVIQAAAIKTEPVELFDEDK 297
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNV 212
+ + + ++F + V YFF A + + A A+
Sbjct: 298 RLLHGVDRYSCVVFTSAEGVRYFFDALYGEGKDARSLGYAKVCAIGSATAKALTNYGITP 357
Query: 213 VTVACFPKETSLLKLLPLR 231
+ K S+++ L
Sbjct: 358 DIIPVDYKAESVVEALKQH 376
>gi|238897906|ref|YP_002923585.1| uroporphyrinogen III synthase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465663|gb|ACQ67437.1| uroporphyrinogen III synthase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 248
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 84/243 (34%), Gaps = 19/243 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M +++TRP + IQ G+ PL F R+ + L+ + I + S
Sbjct: 1 MVVLVTRPSPMGEELVQFIQAHGHTAYHYPLIEFSQGRDLMELSQRITQMREEDMIFVVS 60
Query: 57 SESLSTLPAN-------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ L + + +AIG +A ++ +I + N ++
Sbjct: 61 KTAIDYLASFFKNNPLSWPPSIFYYAIGRNTAQAWQKINPFKIRYPL-NQETSEGLLALA 119
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT--MKNLLQNA 167
+ F +K + L G D L + + +CY + Y ++
Sbjct: 120 NLQFINKKTALILRGNGGRELLGDRLKKRGAQIIYCECYQRHPVHYDGAQKSIQWQRLKV 179
Query: 168 DAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D ++ + + ++L I + + +S +A+ + + +A
Sbjct: 180 DTVVVTSEEMLHRIYALVPEEARFAWLIKSRLIVVSARLANIATHLGWHHIQIAENASNE 239
Query: 223 SLL 225
SLL
Sbjct: 240 SLL 242
>gi|302879709|ref|YP_003848273.1| Uroporphyrinogen III synthase HEM4 [Gallionella capsiferriformans
ES-2]
gi|302582498|gb|ADL56509.1| Uroporphyrinogen III synthase HEM4 [Gallionella capsiferriformans
ES-2]
Length = 248
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 64/235 (27%), Gaps = 12/235 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSS 57
+++TRP +A + I + G V+ P+ + + L Q + S
Sbjct: 10 KVLVTRPRDQAFTLAQAIGQQGGTAVLFPMLEIAPVPDLLRLQEQVSHVEQANLAIFISP 69
Query: 58 ESLSTLPANFCRHTPIF-AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
++ A P A + A + + ++ ++
Sbjct: 70 NAVKYGMAATGGKVPARVATVGEGSAKALRALGIAHVIVPVERFDSEGLLARPELQNIDG 129
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
++ G D L E + + CY + L D I +
Sbjct: 130 WHVMIFRGDGGRELLGDTLRERGARVEYVTCYLRCK----PQCPVSELAGVDLITVTSSE 185
Query: 177 SVLYFFSLP--LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
++ + + + IA + V + + LL L
Sbjct: 186 ALNHLSQMIVDSKEVFDRPLFVIHPRIAELAKRLGWSKVHLTES-GDDGLLAGLQ 239
>gi|262038283|ref|ZP_06011673.1| porphyrin biosynthesis protein HemD [Leptotrichia goodfellowii
F0264]
gi|261747750|gb|EEY35199.1| porphyrin biosynthesis protein HemD [Leptotrichia goodfellowii
F0264]
Length = 510
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 73/242 (30%), Gaps = 13/242 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR +K KI ++G + +P + + Y AI S S++
Sbjct: 254 NILVTRNKEKQGDITNKINELGGQALNLPFINIEYI--DYEMPDLSKYSAILFNSINSVA 311
Query: 62 TLPANFCRHTPIFAIGEAS--ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + + +I + + E+ V FT +
Sbjct: 312 GFMRKIKDIRILGNVKIGVVGEKTDEEMRKYKIIPDFYPKKYTVEKLAEECVNFTKEGDN 371
Query: 120 IYLGGKPRNFHFEDYLIE-HKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
+ + E+ + +K + + Y ++ + + + ++ +D ++F + S+
Sbjct: 372 VLFIVSDISPVNEEEYTKLYKRNCKKLVVYNTKKVKVEKEKAERYVEKSDILMFLSSSTF 431
Query: 179 LYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
F + I V A E ++ L
Sbjct: 432 EAFAESIDLTGNEEMKKILNEKTVASIGPVTTKTIEKYGIKVGIEAEKFTEEGIVDALLK 491
Query: 231 RR 232
R+
Sbjct: 492 RK 493
>gi|325696922|gb|EGD38809.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK160]
Length = 241
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 65/226 (28%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR E+I++ G+ +PL A+ + S+ ++
Sbjct: 4 KIIFTREQAPDSTWLEEIRRAGFETHHVPLIRCQSLPLPEAVQAILSEADWVFFASAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L P + ++
Sbjct: 64 EAFSPYLQADYQIATIGPQTSQALDKLGRDCDFQASS--HYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHEVWSWPMYETTSNPAGQDQLETYLSQEDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQAVKESGYGVDYQPQSPSVEEMV 227
>gi|303239239|ref|ZP_07325768.1| uroporphyrin-III C-methyltransferase [Acetivibrio cellulolyticus
CD2]
gi|302593284|gb|EFL63003.1| uroporphyrin-III C-methyltransferase [Acetivibrio cellulolyticus
CD2]
Length = 509
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 81/245 (33%), Gaps = 21/245 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+++TRP K++++G + P +++ L +S+ + TS
Sbjct: 255 KVIVTRPKISGGTLSSKLKELGADVIDYPCIEICEIKKNSRLERVLNHIESFDWLVFTSK 314
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIV 107
+S + I AIG +A G F + + +LA+ +
Sbjct: 315 NGVSLFFDYLRQLKKDFRVLSGLKIAAIGSQTALTLSDYGIIADFVPEIYDGTHLAEGLC 374
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + ++ + N D L + + Y + ++ L+++
Sbjct: 375 KITGA---HEKILLARAQDGNTEIIDILDTNGRQYEDVPIYKTIYANPGSQRIEALIRDN 431
Query: 168 D--AILFYARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKNVVTVACFPKETSL 224
F + S+V F ++ +C+ A A ++C S+
Sbjct: 432 PDIYATFTSASTVEGFVKSGDNFDLNNITGICIGKQTAKAAKKYGIKH-YISCEATIESM 490
Query: 225 LKLLP 229
LK L
Sbjct: 491 LKKLK 495
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 41/158 (25%), Gaps = 8/158 (5%)
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
+K + L + + K +I K L E
Sbjct: 218 EKAEEEKIKSPSVVVIGGVCLLNESLDWFSNRPLSGKKVIVTRPKISGGTLSSKLKELGA 277
Query: 141 PLRVIDCYYSQDIAYPE--TTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS------A 192
+ C +I + N +++ D ++F +++ V FF K
Sbjct: 278 DVIDYPCIEICEIKKNSRLERVLNHIESFDWLVFTSKNGVSLFFDYLRQLKKDFRVLSGL 337
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ + A + V T L + L
Sbjct: 338 KIAAIGSQTALTLSDYGIIADFVPEIYDGTHLAEGLCK 375
>gi|56421179|ref|YP_148497.1| uroporphyrinogen III cosynthase [Geobacillus kaustophilus HTA426]
gi|56381021|dbj|BAD76929.1| uroporphyrinogen III cosynthase [Geobacillus kaustophilus HTA426]
Length = 256
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 71/238 (29%), Gaps = 11/238 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
+++TR ++A K++ +G +P+ +PL +A Y + +TS
Sbjct: 11 VLVTRDKRQAASFSAKLRAVGAVPIEIPLIAIRPAAAPEAIAALAGRLGEYRWLVLTSVN 70
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK- 117
++ + P+ + A + A+ + Q
Sbjct: 71 AVRFFFPHVSLPRPLPNVAVVGRKTAAALVEYGVSPALVPDDFTAERLAAMLAPRVKQGD 130
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYAR 175
++++ G + + L + + Y + + LL+ DAI +
Sbjct: 131 RVLFVKGDLASPTLPEALRKAGAAVDEFTVYQTVPDLSGREPLLALLRERKLDAITLMSP 190
Query: 176 SSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S+V L A C+ A V ++K +
Sbjct: 191 SAVHSLARLLGEEASALLSGVAVACIGPVTKKAAEREGITVHICPADYTTDGIIKAME 248
>gi|162448283|ref|YP_001610650.1| uroporphyrinogen-III synthase [Sorangium cellulosum 'So ce 56']
gi|161158865|emb|CAN90170.1| Uroporphyrinogen-III synthase [Sorangium cellulosum 'So ce 56']
Length = 534
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 71/256 (27%), Gaps = 26/256 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
+++TRP +A T ++ G V +P + + Y A+ TS
Sbjct: 265 RVLVTRPRHQARSTSRLVRLRGGEAVELPTIDIHPPPDPARVTEAVRGLSGYHAVVFTSE 324
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNS------INL 102
++ R + AIG +A +G ++ L
Sbjct: 325 NGVACFFKEMDRLGLDARAFGPARLAAIGVGTAAALAARGVRADIVPREFRGEELAEAIL 384
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTM 160
A + + +P+ ++ + L + V+ Y ++ + E +
Sbjct: 385 ADPALAGRRAASPRVRVLLARALVAREVLPERLRAAGCEVDVVPVYETRPASAGRREELL 444
Query: 161 KN-LLQNADAILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTV 215
+ D +L + S+V L + + +
Sbjct: 445 RALSAGAIDVVLLTSSSTVDSLCDLLGEGAAARLERVLLASIGPITTATAEKRGLRIGVT 504
Query: 216 ACFPKETSLLKLLPLR 231
A LL L
Sbjct: 505 AEVSTTAGLLDALDRH 520
>gi|328472410|gb|EGF43276.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus 10329]
Length = 242
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 66/241 (27%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-DRESVFLAMQQSYGAIAITSSES 59
M +++TRP ++ +++ G PL + ++ + S +
Sbjct: 1 MAVLVTRPGEQGSALCSLLERHGISAHHHPLIDIVADLTDTHLTTHLHQAQIVIAVSRHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + TQ + ++ +
Sbjct: 61 VQCAQQILTSNGASWPKQAVYLAVGQKTAHYLSKCTQQKVHYPEVSDSEHLLRLPALQNV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
Q+ ++ L G +D L+ + + Y + I + + +L + I+
Sbjct: 121 EQQQVLILRGNGGRELIKDALVRRGAKVHYSETYKREFIPFDPVSCVSLWKTLQIDQIVV 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y S +++ S IA V LL L
Sbjct: 181 TSGEQLDYLCSQLTSEQLTWLNQQELYIPSQRIADIAIQRGFTRVRCTGSASNQELLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|269964924|ref|ZP_06179094.1| uroporphyrinogen-III synthetase [Vibrio alginolyticus 40B]
gi|269830400|gb|EEZ84624.1| uroporphyrinogen-III synthetase [Vibrio alginolyticus 40B]
Length = 242
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 68/241 (28%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-DRESVFLAMQQSYGAIAITSSES 59
M +++TRP ++ +++ G PL + ++ + S +
Sbjct: 1 MAVLVTRPGEQGNALCSLLERHGISAYHHPLIDIVADLTDTHLSKHLHQAQIVIAVSRHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + TQ + ++ ++
Sbjct: 61 VQCAQQILASNGMSWPKQAIYLAVGQKTAHYLSKCTQQKVHYPQVSDSEHLLRLPELNNV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
Q+ ++ L G +D L+ + + Y + I + + +L +N I+
Sbjct: 121 AQQQVLILRGNGGRELIKDALVRRGAKVHYSETYKREFIPFDPVSCISLWKNLQINQIIV 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y S +++ S IA V LL L
Sbjct: 181 TSGEQLDYLCSQLTSEQLTWLNQQELYIPSQRIADIAIQRGFTRVRCTGSASNQELLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|91227535|ref|ZP_01261872.1| uroporphyrinogen-III synthetase [Vibrio alginolyticus 12G01]
gi|91188559|gb|EAS74851.1| uroporphyrinogen-III synthetase [Vibrio alginolyticus 12G01]
Length = 242
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 69/241 (28%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-DRESVFLAMQQSYGAIAITSSES 59
M +++TRP ++ +++ G PL + ++ + S +
Sbjct: 1 MAVLVTRPGEQGNALCSLLERHGISAYHHPLIDIVADLTDTHLSKHLHQAQIVIAVSRHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + TQ + ++ ++
Sbjct: 61 VQCAQQILASNGMSWPKQAIYLAVGQKTAHYLSKCTQQKVHYPQVSDSEHLLRLPELNNV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
Q+ ++ L G +D L+ H + + Y + I + + +L +N I+
Sbjct: 121 AQQQVLILRGNGGRELIKDALVRHGAKVHYSETYKREFIPFDPVSCISLWKNLQINQIIV 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y S +++ S IA V LL L
Sbjct: 181 TSGEQLDYLCSQLTSEQLTWLNQQELYIPSQRIADIAIQRGFTRVRCTGSASNQELLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|254284241|ref|ZP_04959209.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
gi|219680444|gb|EED36793.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
Length = 679
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 24/237 (10%), Positives = 65/237 (27%), Gaps = 10/237 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSESL 60
+++TRP + + R + + G+ + P+ + L S+ ++
Sbjct: 5 VILTRPQEDSARLAAILAERGWDVFVQPMLRMEPLAPAAIDALPALTDNDLAIFISANAV 64
Query: 61 STLPANFCRHTPI--FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ A++ + + + ++ +
Sbjct: 65 RQGLPHLAERLRDAGMVSLAVGRRTAQELEAAGLPVMTPDREDSEGLLALPALREISGHR 124
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS-- 176
++ + G+ + L + CY + + T L ++ A S
Sbjct: 125 VLLVKGEGGRAVLAETLRTRGAEVIEFVCYQRVNESLDATDFAGELAKRRPLVIQASSEQ 184
Query: 177 ----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
P ++ + S +A V A + + L++L
Sbjct: 185 TLRRVTELLAEGGQPNLVAENVVVPSERVAQVAAELGWQHVITAPNAGDEAFLRVLE 241
>gi|209542473|ref|YP_002274702.1| Uroporphyrinogen III synthase HEM4 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530150|gb|ACI50087.1| Uroporphyrinogen III synthase HEM4 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 245
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 84/235 (35%), Gaps = 10/235 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP T ++++G+ MP ++V A+ +TS ++++
Sbjct: 11 VLVTRPEPGLADTMAAVERLGWQAHAMPALRIEPIMDAV--LPLARTQAVLLTSGQAIAA 68
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
L PI A+G +A R GFT + + +LA + + L L+
Sbjct: 69 LAGRVRPDMPILAVGAVTARRMRDAGFTDVTVAAGTAADLADL--ARDRLDPGAGSLLVP 126
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLY 180
L + Y + P+ ++ L LFY+ +
Sbjct: 127 TAPTYGQDLAVALRRAGFRVSRRCVYRVRPAGAPDAAVRTALAGGVIDAALFYSAETARQ 186
Query: 181 FFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
F A + + +S + +A+ + + VA P + ++L L R
Sbjct: 187 FLRHLPAGGHAALRNIRAIAISKSTEAALSTATWRAIQVAARPDQAAILDRLGRR 241
>gi|332365712|gb|EGJ43470.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK1059]
Length = 241
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 69/226 (30%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A+Q + TS+ ++
Sbjct: 4 KIIFTREQAPDSTWLEKIRQAGFETHHVPLIRCQSLPLPEAVQAIQSEADWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + + + +S I E L P + ++
Sbjct: 64 EAFNPYLKADYQIATIGPQTSQALDK--LGRDCDFESSSHYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++N L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHDVWAWPMYETTSNPAGQDQLENYLSQEDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ + A A+ S V P ++
Sbjct: 182 SFCAIKPHLASRHQIAVIGQTTAQAVKESGYEVNYQPQSPSVEEMV 227
>gi|255280053|ref|ZP_05344608.1| siroheme synthase [Bryantella formatexigens DSM 14469]
gi|255269144|gb|EET62349.1| siroheme synthase [Bryantella formatexigens DSM 14469]
Length = 502
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 75/245 (30%), Gaps = 18/245 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSS 57
I++TRP + ++++ G + +P + L +++ +A TS
Sbjct: 254 KILVTRPRELVSEMAARLREQGAEVLELPAIRIVPRECAGEVEETLKNLRTFDWLAFTSP 313
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ N + + +G + + G +
Sbjct: 314 SGVRVFFENLKKCRLDIRSLSAVKLAVLGNGTGKELEKYGCYADLMPQQAYAQELGK-AL 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QN 166
+ ++ L++ E+ + + + Y + P ++ +
Sbjct: 373 AEACRGGERILLFRAAAGSQELLEELAKVPGVVVNDLAAYDTVYETSPLIDVRAEFEEKK 432
Query: 167 ADAILFYARSSVLYFFS-LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D +F + S+V F +P +C+ +A +A P +++
Sbjct: 433 TDYAVFTSASTVRGFAESVPGLDFTKVRAVCIGRKTKAAADELGME-TFMAEEPSMDAVV 491
Query: 226 KLLPL 230
+L+
Sbjct: 492 RLVEK 496
>gi|167038986|ref|YP_001661971.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter sp. X514]
gi|300913423|ref|ZP_07130740.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter sp. X561]
gi|307723561|ref|YP_003903312.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter sp. X513]
gi|166853226|gb|ABY91635.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter sp. X514]
gi|300890108|gb|EFK85253.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter sp. X561]
gi|307580622|gb|ADN54021.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter sp. X513]
Length = 497
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 73/239 (30%), Gaps = 18/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSES 59
I++TR +++ + ++ + + G V+ P ++ FL + TS
Sbjct: 254 RILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFLNNIVKFLEEIHKFDYAVFTSVND 313
Query: 60 LSTLPANFCR--------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + AIG +A ++ + +++ V
Sbjct: 314 VWSFIEASREKRVDLRNLRIKVVAIGSKTAEALENIFIYPDIIPEEYTSYSLANALKKHV 373
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAI 170
I L + + ++ I Y ++ + + + L+ D
Sbjct: 374 E----GKNIALLTSQIGGDILLESLGNCANVQKIVAYKNEPNYEIKEKLISELRKGIDIA 429
Query: 171 LFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+F + S+ Y L ++ + AI NV + L++
Sbjct: 430 VFTSSSTFNYMHQLIGDEINLLKNSKIAAIGPVTKKAIEDKGFNVDIMPSEYTTEKLIE 488
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/143 (9%), Positives = 35/143 (24%), Gaps = 5/143 (3%)
Query: 94 HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
+ + L + + K ++ ++ + L E + V
Sbjct: 230 FAVGDVVTLRDRLKWYENKKLFGKRILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPF 289
Query: 154 AYPETTMKNLLQNADAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPAS 208
+ D +F + + V F + + + + A A+
Sbjct: 290 LNNIVKFLEEIHKFDYAVFTSVNDVWSFIEASREKRVDLRNLRIKVVAIGSKTAEALENI 349
Query: 209 YKNVVTVACFPKETSLLKLLPLR 231
+ + SL L
Sbjct: 350 FIYPDIIPEEYTSYSLANALKKH 372
>gi|257791815|ref|YP_003182421.1| uroporphyrin-III C-methyltransferase [Eggerthella lenta DSM 2243]
gi|257475712|gb|ACV56032.1| uroporphyrin-III C-methyltransferase [Eggerthella lenta DSM 2243]
Length = 522
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/254 (12%), Positives = 74/254 (29%), Gaps = 26/254 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+ +TR +A E+++ +G + +P+ + Y + TS+
Sbjct: 264 VAVTRTRAQASGLTERLRALGASVIELPVISIAAPSSFSGVDSCIERLAGYRFVVFTSAN 323
Query: 59 SLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHG-KDNSINLAKIIVE 108
+ I AIG A+A ++G + + +A +++E
Sbjct: 324 GVKAFFERLVLAGLDARALACARIAAIGPATAAELAERGIVADLVPGEFRAEAVADLLIE 383
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI---AYPETTMKNLLQ 165
+ ++ L + V+ Y + + +
Sbjct: 384 AGLTDGDW--VLVPRALEARDVLPRMLRACGARVDVVPVYRTVPPSRASAEPALASLIAG 441
Query: 166 NADAILFYARSSVLYFFSLPLPAKISAA-------FLCLSNNIASAIPASYKNVVTVACF 218
ADA+ F + S+V F L + F + + + A
Sbjct: 442 EADAVTFTSSSTVRNFVGLVRDVAPNPVEVLERLDFYSIGPITTTTARDESLRIAAQAEA 501
Query: 219 PKETSLLKLLPLRR 232
L++ + R
Sbjct: 502 YTIDGLVEAIVKHR 515
>gi|114561626|ref|YP_749139.1| uroporphyrinogen III synthase HEM4 [Shewanella frigidimarina NCIMB
400]
gi|114332919|gb|ABI70301.1| Uroporphyrinogen III synthase HEM4 [Shewanella frigidimarina NCIMB
400]
Length = 239
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 25/239 (10%), Positives = 67/239 (28%), Gaps = 9/239 (3%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP + +E++ ++ PL + E + + + SS ++
Sbjct: 1 MKVLLTRPQGRNQAMEEQLSLRDVAYLVTPLLSVVETTEQLNPTHLNNTDNLLFISSNAV 60
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN---LAKIIVEQKVLFTPQK 117
+ P A + + + ++ ++ ++
Sbjct: 61 DFAAQKLQQQFPTHCRYFAVGQATADSLAQYNINAFTSPEHSQDSEGLLSLAQLQDVDKQ 120
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYAR 175
I + G + L + Y + ++ I+ +
Sbjct: 121 SFIIVRGLGGRETLAEQLQLRGANVNYWQVYQRAIPNLDGKAITQQWKSFGIDTIVVTSG 180
Query: 176 SSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ L + + SN + A + ++ A ++L L L
Sbjct: 181 EILSNLVELVPKELFAWLRACHIIVPSNRVELQAKAMGLSHISNANGANTQAILASLAL 239
>gi|327489114|gb|EGF20909.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK1058]
Length = 241
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A+ + TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQAGFETHHVPLIRCQSLPLPEAVQAVLPEADWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L P + ++
Sbjct: 64 EAFSPYLKADCQIATIGPQTSQALDKLGRDCAFQASS--HYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHEVWAWPMYETTSNPAGQDQLETYLSQEDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A + S V P ++
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQVVKESGYGVDYQPQSPSVEEMV 227
>gi|227502551|ref|ZP_03932600.1| uroporphobilinogen-III synthase [Corynebacterium accolens ATCC
49725]
gi|306835116|ref|ZP_07468156.1| uroporphyrinogen III synthase/methyltransferase [Corynebacterium
accolens ATCC 49726]
gi|227076713|gb|EEI14676.1| uroporphobilinogen-III synthase [Corynebacterium accolens ATCC
49725]
gi|304568973|gb|EFM44498.1| uroporphyrinogen III synthase/methyltransferase [Corynebacterium
accolens ATCC 49726]
Length = 573
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 74/248 (29%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++ G IP +P R + Y I T
Sbjct: 295 RVLVPRTKEQAGPMSARLAGYGAIPQNVPTISIEPPRNPAQMDRAIKGIVEGRYKWIVFT 354
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S +++ + + A+G +A R KG N ++
Sbjct: 355 SVNAVTAVWDKISQLGLDARDFAGVHLAAVGTKTADAIRAKGMVPELLPHKKKQNAEGLL 414
Query: 107 ---VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ D L + + + Y + A P ++++
Sbjct: 415 DVFPNYVEDIDAVSRVLLPRTDIAADTLVDGLQALQWDVDDVVAYRTVRAAPPSAEIRDM 474
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
++ DA+ F + S+V + C+ + ++A V V
Sbjct: 475 IKTGGFDAVAFTSGSTVRNLVGIAGKPHQRTIIACIGPSASAAAEELGLRVDVVPDVADV 534
Query: 222 TSLLKLLP 229
+L+ L
Sbjct: 535 PALVDALA 542
>gi|172037032|ref|YP_001803533.1| bifunctional uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Cyanothece sp. ATCC 51142]
gi|171698486|gb|ACB51467.1| bifunctional uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Cyanothece sp. ATCC 51142]
Length = 503
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 72/253 (28%), Gaps = 29/253 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
++ITR +++ + +Q+ G + MP + L + S+ + TS+
Sbjct: 248 VLITRAKEQSSQFSSLLQQQGANTLEMPALEILPPSSWEQLDLAIEALSSFDWVIFTSAN 307
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I +G+ +A +Q T F + + +I
Sbjct: 308 GVKFFFQRLQELGQDIRVLGKIKIAVVGKKTASCLKQYHLTPDFIPPNFIADS--LIDYF 365
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD- 168
QK L L + + + + Y S + LQN
Sbjct: 366 PESLGHQKILFPRVETGGRDILVKELQKQEANIVEVPAYQSGCPETINSQAWEALQNKQV 425
Query: 169 -AILFYARSSVLYFFSLPLPAKI------------SAAFLCLSNNIASAIPASYKNVVTV 215
I F + +V F++L A + + + V
Sbjct: 426 NIITFTSSKTVKNFYTLVQKALKTQSKSEILSLLDNICLASIGPQTSKTCYDLLGRVDLE 485
Query: 216 ACFPKETSLLKLL 228
A L + L
Sbjct: 486 AEEYTLDGLTQGL 498
>gi|168188065|ref|ZP_02622700.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum C str. Eklund]
gi|169294099|gb|EDS76232.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum C str. Eklund]
Length = 497
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 75/245 (30%), Gaps = 16/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
IV+TR ++ +KI +G P+ +P E L + Y + TS
Sbjct: 253 NIVVTRARAQSSTLVDKIDSLGGNPIEIPSIKIEEILERDELIEEIKNIEKYSYLIFTSR 312
Query: 58 ESLSTLPANFCRHTPIFAIGEA------SACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ N + + + + I LA+ IVE
Sbjct: 313 NAVKIFFKNLFKIGFDSRKLGSLKILSIGTGTSEELKNNGIVADIVPKKFLAESIVESLK 372
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA-- 169
+ I + + + ++ + Y + + + + NLL +
Sbjct: 373 DILSKDDKILIPRAKETREYLVDELSKVCKVKEVKIYETVKMENNKEYVLNLLDSDAIDY 432
Query: 170 ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
I F + S+V F + I S L + + I V A +L
Sbjct: 433 ITFTSSSTVKNFIDIIGKENIEKLKSTKLLSIGPITSRTIEDFNLKVYNEAEEYTIEGIL 492
Query: 226 KLLPL 230
K+L
Sbjct: 493 KVLQK 497
>gi|94676811|ref|YP_588540.1| uroporphyrinogen-III synthase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94219961|gb|ABF14120.1| uroporphyrinogen-III synthase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 246
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/245 (12%), Positives = 77/245 (31%), Gaps = 17/245 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP + EK++ G + +PL F+ + L + I S
Sbjct: 1 MSILVTRPSPAGEKLVEKLRAYGKLAWHLPLIRFLPGMDLPMLGRHFMALCQDDLLFILS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + +++ L + + ++
Sbjct: 61 QHAIVYAHSWLLQQSINWPARLRYFTVGSTSGLLLHQFSGLPVNYPHQCETSEGLLNLPS 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ + + L G + L++ + + +CY I Y L +
Sbjct: 121 LASIDGRRALILRGNGGRKILKQTLLQRGVKVEDCECYRRYPIPYDGNEQGRRLLSLGIN 180
Query: 170 -ILFYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + F++L + I + +S +A + + +
Sbjct: 181 TLVITSGEMLQQFYTLIPKSYHYFLLIQCRLIVVSERLAILAHKLGWQDIIIVNITDHDA 240
Query: 224 LLKLL 228
L+++L
Sbjct: 241 LMRVL 245
>gi|269103734|ref|ZP_06156431.1| uroporphyrinogen-III synthase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163632|gb|EEZ42128.1| uroporphyrinogen-III synthase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 251
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 71/248 (28%), Gaps = 18/248 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY----GAIAITS 56
M I++TRP + ++ +G + PL E L Q ++ + S
Sbjct: 1 MTILVTRPSPDGEQLAHQLCAVGLTVIHQPLLAITSGDEVDLLISQLNWLKSDDFLIAVS 60
Query: 57 SESLSTLPAN-------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ + ++ A+G +A + + + ++
Sbjct: 61 DHAVKLAHNYLQSQGASWPKNVHYMAVGHKTAATLAKVTGQSVLMPQHRCD-SEGLLALP 119
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ + ++ L G LI + + Y + TT+ + Q
Sbjct: 120 ELQQIRHRRVLILRGNGGRELIRQELIARHAEVHYCETYQRCWLPLDGTTLADSWQQQQV 179
Query: 170 --ILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + + + L ++ S IA ++ +
Sbjct: 180 DKLVVTSGEQLAFLHQLVPQHNHAWFLNCHLFVPSQRIADQASQLGFTHISTVGSASNQA 239
Query: 224 LLKLLPLR 231
L L
Sbjct: 240 LFTFLSNM 247
>gi|262404856|ref|ZP_06081410.1| uroporphyrinogen-III synthase [Vibrio sp. RC586]
gi|262348940|gb|EEY98079.1| uroporphyrinogen-III synthase [Vibrio sp. RC586]
Length = 242
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP + + + + + G + PL + LA S+ I S +
Sbjct: 1 MTVLVTRPDAQGIELCQLLHQQGITALHHPLITISASPQLPELAEDLASFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + Q + ++ + +
Sbjct: 61 VTFSDQFLQHRRICWPNSAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALEALRHV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ L G L+E +R + Y ++ + T Q+A ++
Sbjct: 121 AGKKILILRGNGGRELIYSTLVERGATVRYQEAYCRSELPFSATECVPQWQHAGVSSLVI 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F S + L S IA + + L+ L
Sbjct: 181 TSSEQLAFFVSQLNGRNLEWVQHLTLLVPSQRIAELAHNLGFHRIVTTPSAANRDLVVAL 240
>gi|152976880|ref|YP_001376397.1| uroporphyrinogen-III synthase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152025632|gb|ABS23402.1| Uroporphyrinogen III synthase HEM4 [Bacillus cytotoxicus NVH
391-98]
Length = 252
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 67/241 (27%), Gaps = 13/241 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA---MQQSYGAIAITSSE 58
+++TR +A + ++K IP+ +PL + + Y I TS
Sbjct: 8 KVLVTRARHQAGQMSAAVRKESGIPMEIPLLRMDGVSQEKLQSVAKQLHVYDWIIFTSKN 67
Query: 59 SLSTLPANFCRHTP--IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + P + + H + +E
Sbjct: 68 GVRFFLEAIHQKLPPAVKIAAVGIKTAQELEARGYQVHFVPTAFVAETFAMEFVQTLNGT 127
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYA 174
+ +++ G L E I + + Y ++ + + LQ+ I F +
Sbjct: 128 ERILFPKGNLARDVISVKLREAHILVEELVVYETKLNDEKKEDLIAALQSNQIDVITFTS 187
Query: 175 RSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S+V F L C+ V V SL++ +
Sbjct: 188 PSTVDSFVKLLEGTNWREWIKKCTIACIGPITEKEARKY-FKNVLVPEEYTIESLIQCIS 246
Query: 230 L 230
Sbjct: 247 K 247
>gi|163803632|ref|ZP_02197497.1| uroporphyrinogen-III synthetase [Vibrio sp. AND4]
gi|159172580|gb|EDP57440.1| uroporphyrinogen-III synthetase [Vibrio sp. AND4]
Length = 242
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 71/241 (29%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-DRESVFLAMQQSYGAIAITSSES 59
M +++TRP ++ + +++ G + PL + ++ ++ I S +
Sbjct: 1 MAVLVTRPGEQGMALCSLLERHGKTAIHHPLIDIVADLSDTQLSKHIETAQIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ H + TQ + ++ ++
Sbjct: 61 VQCAQKILQSHAKSWPKRTIYLAVGQKTAHCLSKCTQQKVHYPQVGDSEHLLQLPELNNV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
+K ++ L G +D L+ + + Y + I + + +L + I+
Sbjct: 121 EKKAVLILRGNGGRELIKDALVRRGAKVHYSETYKREFIPFDPVSCFSLWKAQQIDQIIV 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y S +++ S IA V LL L
Sbjct: 181 TSGEQLDYLCSQLTSEQLAWLNLQELYLPSQRIADIAIQWGFTQVRCTGSASNQELLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|313199810|ref|YP_004038468.1| uroporphyrinogen iii synthase hem4 [Methylovorus sp. MP688]
gi|312439126|gb|ADQ83232.1| Uroporphyrinogen III synthase HEM4 [Methylovorus sp. MP688]
Length = 259
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 69/242 (28%), Gaps = 17/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+ ITRP+ +A R I + G P PL + L Y SS
Sbjct: 8 VAITRPLDQATRLSRLIVEAGGTPYGFPLIEIAPLADYSAFDAQLHELGKYDWTIFISSN 67
Query: 59 SLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ T A + + ++ ++
Sbjct: 68 AVQNAIPRMLNLVGQPPATLRHAAIGPVTAAELTRLGIGPVLTPQGRYDSESLLALPEMQ 127
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AI 170
+ + G + L + +CY + ++ Q A+
Sbjct: 128 QVKGQRFLIFRGVGGRELLAESLRARGATVDFAECYRRINPQTSAEPLEQRWQQQQLDAV 187
Query: 171 LFYARSSVLYFFSLPLPAKISAA---FLCL-SNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + ++ Y ++ + + LC+ IA V VA P + ++L+
Sbjct: 188 VVTSSEAMRYLLNMTNNGQHAWIRDVTLCVNHARIAELPIELGLR-VIVAEAPGDDAMLQ 246
Query: 227 LL 228
L
Sbjct: 247 CL 248
>gi|260767547|ref|ZP_05876483.1| uroporphyrinogen-III synthase [Vibrio furnissii CIP 102972]
gi|260617447|gb|EEX42630.1| uroporphyrinogen-III synthase [Vibrio furnissii CIP 102972]
Length = 242
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 66/241 (27%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSES 59
M +++TRP + +++ + G + PL + L + S +
Sbjct: 1 MAVLVTRPEAQGQALCQQLAQCGIHALHHPLITLKAGADLPQLLPALHQCDLLIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + + + + ++ +
Sbjct: 61 VTFTHQFLQSERSCWPTSAIYLAVGQKTAHVLSKLSAQPVHYPDISDSEHLLALPALHAV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K +I L G D L+ + + Y D+ + Q A ++
Sbjct: 121 QGKSVIILRGNGGRELIFDTLVARGAHVSYREVYQRVDLPFASEACVATWQQAGVDTLVI 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +++F S +S L S+ IA A + L+ L
Sbjct: 181 TSSHQLMFFVSQLTATSLSWVLGLKLLVPSDRIAHDAKALGFQTIVTTGSAANPDLVAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|125717351|ref|YP_001034484.1| uroporphyrinogen-III synthase [Streptococcus sanguinis SK36]
gi|125497268|gb|ABN43934.1| Uroporphyrinogen-III synthase, putative [Streptococcus sanguinis
SK36]
Length = 241
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A+ + TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQAGFETHHVPLIRCQSLPLPEAVQAILPEADWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L + ++
Sbjct: 64 EAFSPYLKADYQIATIGPQTSQALDKLGRACDFQASS--HYGLDFIQEWLDLALQTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHEVWAWPMYATTSNPAGQDQLETYLSQEDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQAVEESGYRVDYQPQSPSVEEMV 227
>gi|294142613|ref|YP_003558591.1| uroporphyrinogen-III synthase [Shewanella violacea DSS12]
gi|293329082|dbj|BAJ03813.1| uroporphyrinogen-III synthase [Shewanella violacea DSS12]
Length = 242
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 65/242 (26%), Gaps = 12/242 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSS 57
M I++TRP + E + ++ PL +A+ I S+
Sbjct: 1 MKILLTRPYGRNQLMVEALTSRSVSYLVAPLLQIEATPAKQQGDGMALFHHADIIIFIST 60
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFT---QIFHGKDNSINLAKIIVEQKVLFT 114
+++ + P A + ++ ++
Sbjct: 61 NAVNFATQAMKQAWPSETQFYAIGAATLNALAQLGISAQEAPQDCQQTEGLLTLPQLQSL 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ + G+ LI + + Y + Q A I+
Sbjct: 121 SNKKIVIVRGRGGREALASELIHRGGDVSYWEVYRRTCPRLSPQSNAQAWQQAKIDTIVI 180
Query: 173 YARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + L + + S+ + A+ VT A ++L L
Sbjct: 181 TSGEILDNLIKLVPKELFAWLRACHIIVPSSRVQEQAVANGFQQVTNAKAANSKAILTAL 240
Query: 229 PL 230
L
Sbjct: 241 GL 242
>gi|289577612|ref|YP_003476239.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter italicus
Ab9]
gi|289527325|gb|ADD01677.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter italicus
Ab9]
Length = 497
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 74/239 (30%), Gaps = 18/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSES 59
I++TR +++ + ++ + + G V+ P +++ FL + TS
Sbjct: 254 RILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFLDNIVKFLEEIHKFDYAVFTSVNG 313
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + AIG +A ++ + +++ V
Sbjct: 314 VWSFIEASREKRFDLRNLSIKVVAIGSKTAEALENIFIYPDIIPEEYTSYSLANALKKHV 373
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAI 170
I L + + ++ I Y ++ + + + L+ D
Sbjct: 374 E----GKNIALLTSQIGGDILLESLGNYANVQKIVAYKNEPNYEIKGNLISELRKGVDIA 429
Query: 171 LFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+F + S+ Y L ++ + AI NV + L++
Sbjct: 430 VFTSSSTFNYMHQLIRDEINLLKNSKIAAIGPVTKKAIEDKGFNVDIMPSEYTTEKLIE 488
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/135 (11%), Positives = 34/135 (25%), Gaps = 5/135 (3%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L + + K ++ ++ + L E + V
Sbjct: 238 LRDRLKWYENKKLFGKRILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFLDNIVKFL 297
Query: 162 NLLQNADAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ D +F + + V F +S + + + A A+ + +
Sbjct: 298 EEIHKFDYAVFTSVNGVWSFIEASREKRFDLRNLSIKVVAIGSKTAEALENIFIYPDIIP 357
Query: 217 CFPKETSLLKLLPLR 231
SL L
Sbjct: 358 EEYTSYSLANALKKH 372
>gi|88705503|ref|ZP_01103213.1| Uroporphyrinogen-III synthase [Congregibacter litoralis KT71]
gi|88700016|gb|EAQ97125.1| Uroporphyrinogen-III synthase [Congregibacter litoralis KT71]
Length = 261
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 16/233 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES-----VFLAMQQSYGAIAITS 56
+++TRP +A + G++P+ +P+ L Y + S
Sbjct: 6 RVLVTRPAGQADSLIGALSDAGFVPLHLPMLQIEPLDPLPGAQRQRLMDLDRYAHVIFVS 65
Query: 57 SESLSTLPANFCRHTPIFAIGEASAC-----LARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + P G+ + + ++ ++ +
Sbjct: 66 ANAARLGVERIRDYWPQLPQGQLYWAVGKSTALCLEAEGLDVRRPERDMSSEGLLAMPGL 125
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--A 169
+ ++ + G+ E L E + + CY A+ ++LL + D
Sbjct: 126 AELQSQRVLIVKGEGGRKFLEVKLRERGAEVDSLACYRRDYAAHDRQACRDLLGDHDLAL 185
Query: 170 ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACF 218
IL + + SL P + + L S +A V A
Sbjct: 186 ILVSSGEGLERLTSLLQPEEHTNLAMTTLLVPSQRVAEQALGLGWTHVECAEN 238
>gi|94501431|ref|ZP_01307950.1| uroporphyrinogen-III synthetase [Oceanobacter sp. RED65]
gi|94426396|gb|EAT11385.1| uroporphyrinogen-III synthetase [Oceanobacter sp. RED65]
Length = 255
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 27/245 (11%), Positives = 65/245 (26%), Gaps = 19/245 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR---------ESVFLAMQQSYGAIA 53
+++TRP + ++++ G V PL + + Y +
Sbjct: 4 LLVTRPQGQGQGMMIELEQAGIQVVHQPLLKIEPLKMEDGADYHQLKQRIVDLDLYDTVI 63
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQK--------GFTQIFHGKDNSINLAKI 105
SS + ++ P + + + + + +
Sbjct: 64 CVSSNAAQLASDWIDQYWPQLPVKQQWFAVGPSSAEPLLPLLDSAAMDIQVPEGNHSEGL 123
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ ++ +K ++ L G + L E + + Y + + ++ LL
Sbjct: 124 LALPQLRDMTEKKVLILRGVGGRELIKSTLEERGASVHYAEFYRRTPVDLTQQQLQTLLT 183
Query: 166 NADAI--LFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
L + V F L S I + +
Sbjct: 184 EHQIHYALLTSGEMVQQFHQALPNTPKDLHLLVPSERIQKMAIDLGFQQTHICQPITAQA 243
Query: 224 LLKLL 228
+LK +
Sbjct: 244 VLKSI 248
>gi|254502181|ref|ZP_05114332.1| uroporphyrinogen-III synthase [Labrenzia alexandrii DFL-11]
gi|222438252|gb|EEE44931.1| uroporphyrinogen-III synthase [Labrenzia alexandrii DFL-11]
Length = 237
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 17/239 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++TRP RT ++++ +G+ MPL +F F S A+A+TS ++
Sbjct: 1 MRFLVTRPRPDCKRTADRLRALGHEADEMPLLHFRPCPPPSF--DLSSIDALALTSRRAV 58
Query: 61 STLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + P F +G+ +A R+ GF + + LA +I+
Sbjct: 59 DAITHHAQLTQLTSLPAFTVGDKTASACREAGFEDVRSADSDVAGLASLILSSAGSDLC- 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYA 174
++YL + R+ L + + R + Y + + T+ L N +L ++
Sbjct: 118 -KVLYLSAEQRSGDLGRLLEKGGVTCRTLPVYRMEPVQDLPKTVFARLANGDYAGVLVFS 176
Query: 175 RSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
R + L +S A + N V +A P+E +L LL
Sbjct: 177 RRTGETLARLFAAHLPEHIFSDLPVYAISGQAAEGLQ--GFNDVHIASAPREDALFDLL 233
>gi|315178739|gb|ADT85653.1| uroporphyrinogen-III synthase [Vibrio furnissii NCTC 11218]
Length = 242
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 66/241 (27%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSES 59
M +++TRP + +++ + G + PL + L + S +
Sbjct: 1 MAVLVTRPEAQGQALCQQLAQCGIHALHHPLITLKAGADLPQLLPALHQCDLLIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + + + + ++ +
Sbjct: 61 VTFTHQFLQSERSCWPTSAIYLAVGQKTAHVLSKLSAQPVHYPDISDSEHLLALPALHAV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K +I L G D L+ + + Y D+ + Q A ++
Sbjct: 121 QGKSVIILRGNGGRELIFDTLVARGAHVSYREVYQRVDLPFASEACVATWQQAGVDTLVI 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +++F S +S L S+ IA A + L+ L
Sbjct: 181 TSSHQLMFFVSQLTATSLSWALGLKLLVPSDRIAHDAKALGFQTIVTTGSAANPDLVAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|170691940|ref|ZP_02883104.1| protein of unknown function DUF513 hemX [Burkholderia graminis
C4D1M]
gi|170143224|gb|EDT11388.1| protein of unknown function DUF513 hemX [Burkholderia graminis
C4D1M]
Length = 677
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 66/264 (25%), Gaps = 37/264 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+VITRP ++ E++ G + + PL + L + Y + S
Sbjct: 25 VVITRPAGQSNELIERLAAAGAVTLDFPLIDIAPVEDDAPLRAALGSLERYALVVFVSPN 84
Query: 59 SLSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAK 104
++ A P A +A + + +
Sbjct: 85 AIDHAFARSGAIWPHALPVGVVGPGSVRALARHGVNAPAHQVISPASDADEDNGRFDSEG 144
Query: 105 IIVEQK----VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPETT 159
+ K ++ + G D L E + + Y
Sbjct: 145 LFAAIDAALGEANLEGKRVLIVRGDGGREWLADRLREAGAEVETVAAYRRLVPEPSIAAW 204
Query: 160 MKNL---LQNADAILFYARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPAS 208
+ A L + V L A + IA A
Sbjct: 205 ARVHRLLAGEPHAWLLTSSEGVRNLHELAQEHLTADEIAQLKRAPIVAPHPRIAQTARAL 264
Query: 209 YKNVVTVACFPKE---TSLLKLLP 229
+ +TV+ E +LL LP
Sbjct: 265 GFDRITVSGAGDERIAQALLAALP 288
>gi|156742008|ref|YP_001432137.1| uroporphyrinogen III synthase HEM4 [Roseiflexus castenholzii DSM
13941]
gi|156233336|gb|ABU58119.1| Uroporphyrinogen III synthase HEM4 [Roseiflexus castenholzii DSM
13941]
Length = 269
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 67/241 (27%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
I +TR ++A + G ++ P + + L Y I TS
Sbjct: 11 RIAVTRAAERAEGLAAALSSEGAEVLVCPTIAYAPPDDPDRLEAALERLDQYDWIIFTSV 70
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
++ TL P+ A ++ + ++ +
Sbjct: 71 AAVDTLARYQALPPPLHVRVAAVGKATAAAIESRGGRVDLLPAQQNAEGLLAELRNVAGQ 130
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK-NLLQNADAILFYARS 176
+ L E + + V+ Y + + + DA++F + S
Sbjct: 131 RFLLPVSDIARDTLAVGLREREALVDVVTAYRTVPGPGVRDLIDPLCRRAIDAVVFSSPS 190
Query: 177 SVLYFFSLPLPAKIS----------AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
++ Y I+ A + + A A+ +V A P + +
Sbjct: 191 TLRYLIDGMEQFGIARSVARALFDGVALIAIGPTTAQALRDEGLSVAAQAPNPAVEGVAE 250
Query: 227 L 227
Sbjct: 251 A 251
>gi|126658983|ref|ZP_01730125.1| uroporphyrinogen III methylase [Cyanothece sp. CCY0110]
gi|126619781|gb|EAZ90508.1| uroporphyrinogen III methylase [Cyanothece sp. CCY0110]
Length = 503
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/253 (15%), Positives = 74/253 (29%), Gaps = 29/253 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
++ITR +++ + +Q+ G + MP L + S+ + +TS+
Sbjct: 248 VLITRAKEQSSQFSRLLQQQGANTLEMPTLEISPPSSWEELDLAIEGLSSFDWLILTSAN 307
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I +G+ +A +Q T F + + +I
Sbjct: 308 GVKFFFQRVQELGKDIRVLGKIKIAVVGKKTASCLKQYHLTPDFIPPNFIADS--LIEYF 365
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
QK L L + + + + Y S ++ LQ
Sbjct: 366 PESLGHQKILFPRVETGGRELLVKELQKQEANIVEVPAYQSGCPETIDSQAWEALQTKQV 425
Query: 168 DAILFYARSSVLYFFSLPLPAKI------------SAAFLCLSNNIASAIPASYKNVVTV 215
+ I F + +V F+SL A + + + + V
Sbjct: 426 NIITFTSSKTVKNFYSLVQKALKTHSKSDILSLLDNVCLASIGPQTSKTCYDLLERVDLE 485
Query: 216 ACFPKETSLLKLL 228
A L K L
Sbjct: 486 AEEYTLDGLTKGL 498
>gi|288957244|ref|YP_003447585.1| uroporphyrinogen III synthase [Azospirillum sp. B510]
gi|288909552|dbj|BAI71041.1| uroporphyrinogen III synthase [Azospirillum sp. B510]
Length = 259
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 88/242 (36%), Gaps = 18/242 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP + A +++ +G+ + P+ + A+ TS+ +
Sbjct: 19 RLLVTRPAEDAEPLVRRLEALGHDTAVEPMLSMVWLDGP--EPDLSDVQALLFTSANGVR 76
Query: 62 TL-PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
R P+ A+G+A+A AR GFT + + LA + + L+
Sbjct: 77 AYSKRTSRRDRPVHAVGDATARAARAAGFTMVDSASGDVYALAGRVRA--LRDPSAGTLL 134
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYARSSV 178
++ G L LR Y + L+ + D +LF++ +
Sbjct: 135 HVAGSKVAGDLAGLLGAAGFMLRRSVMYDAVPALTLSDETATFLRTSGLDGVLFFSPRTA 194
Query: 179 LYFFSLPLPAKISAA-----FLCLSNNIASAIPASY------KNVVTVACFPKETSLLKL 227
F L A + CLS +A A A V VA P++ SLL L
Sbjct: 195 SSFVRLLAGAGLVDRCRTVDAFCLSPAVAEAACAYGDGGAVPWKSVRVAARPEQDSLLDL 254
Query: 228 LP 229
LP
Sbjct: 255 LP 256
>gi|163748698|ref|ZP_02155951.1| uroporphyrinogen-III synthase [Shewanella benthica KT99]
gi|161331808|gb|EDQ02612.1| uroporphyrinogen-III synthase [Shewanella benthica KT99]
Length = 242
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 69/242 (28%), Gaps = 12/242 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSS 57
M I++TRP + E + G ++ PL S +A+ Q I S+
Sbjct: 1 MKILLTRPQGRNQLMVEALLARGVAHLVTPLLQVEATPTQQQSHGMALFQHADIIIFIST 60
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFT---QIFHGKDNSINLAKIIVEQKVLFT 114
++ + P+ A + ++ ++
Sbjct: 61 NAVKFAAQAIEKVWPLETQFYAVGEATLNALAQLGISAQEAPQDCQQTEGLLTLPQLQSL 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
+K +I + G + L + + Y + Q A I+
Sbjct: 121 SKKKIIIVRGVGGRETLANELTHRGADVSYWEVYRRTSPTLTSASNAQAWQQAKIDTIVI 180
Query: 173 YARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+ L + + S+ + A+ VT A ++L L
Sbjct: 181 TSGESLDNLIKLVPKELFAWLRACHIIVPSSRVQEQAIANGFRQVTNAKAANCKAILVAL 240
Query: 229 PL 230
L
Sbjct: 241 GL 242
>gi|255526356|ref|ZP_05393270.1| uroporphyrin-III C-methyltransferase [Clostridium carboxidivorans
P7]
gi|255509933|gb|EET86259.1| uroporphyrin-III C-methyltransferase [Clostridium carboxidivorans
P7]
Length = 486
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 71/236 (30%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES--VFLAMQQSYGAIAITSSES 59
+ ITR +++ +EK+ +G + ++ E+ ++ SY I TS
Sbjct: 251 NVCITRTKEQSKEIREKLIDLGAQVTEINSIEIKYNEEAMGDYIDKLNSYDYIVFTSVNG 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK------IIVEQKVLF 113
+++ + +A I H +A+ + + K
Sbjct: 311 VNSFFKYLNNNNYDVRKIKAVFAAIGPATEKAIKHRGIIPKIIAEKFVAESLFEKMKNFI 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ K + + L E+ + Y + P + D ++F
Sbjct: 371 KSGDKIFLPRAKNARPYLAEVLRENGCTVDECHVYETVLGTLPSE---KCFDDVDTVVFT 427
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V L I + + +A+ V +++ L
Sbjct: 428 SPSTVNNMIELVGVDSIKQKRVISIGPITGNALEKQGIK-YEVCDEYTTEGVIRKL 482
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 36/128 (28%), Gaps = 5/128 (3%)
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ + + + K ++ + LI+ + I+ + +
Sbjct: 237 DKLNWYEKKPLFGENVCITRTKEQSKEIREKLIDLGAQVTEINSIEIKYNEEAMGDYIDK 296
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKISAA-----FLCLSNNIASAIPASYKNVVTVACF 218
L + D I+F + + V FF F + AI +A
Sbjct: 297 LNSYDYIVFTSVNGVNSFFKYLNNNNYDVRKIKAVFAAIGPATEKAIKHRGIIPKIIAEK 356
Query: 219 PKETSLLK 226
SL +
Sbjct: 357 FVAESLFE 364
>gi|86359486|ref|YP_471378.1| uroporphyrinogen-III synthase [Rhizobium etli CFN 42]
gi|86283588|gb|ABC92651.1| uroporphyrinogen-III synthase protein [Rhizobium etli CFN 42]
Length = 235
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 120/240 (50%), Gaps = 17/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A RT ++++ MG+ P+++PL HD + A+ ++GAIA+TS E+
Sbjct: 1 MRVLVTRPAHSATRTAQRLRDMGHEPLLLPLRRPQHDSAAAAGALAATHGAIAVTSGEAA 60
Query: 61 STLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L A P+FA+GE +A A++ GF + N +LA ++ Q+V
Sbjct: 61 RVLSALGETLPPHLDRPVFAVGERTAQAAQRLGFRSVTASSGNGRDLADLVGAQRVED-- 118
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFY 173
L+YL G+PR FE L E I V +CY +A ++++ A+LFY
Sbjct: 119 ---LLYLAGRPRAEIFEGRLRELGIRFSVAECYRMLPVAPGPADIESIFSGHRPDAVLFY 175
Query: 174 ARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R + FF + + LCLS +A AIP K V ++ P E SLL LL
Sbjct: 176 SRQTAEDFFQVAELRSALSEQGGIRLLCLSEAVAQAIPTFLKETVAISSMPDEISLLSLL 235
>gi|332363289|gb|EGJ41074.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK49]
Length = 241
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 64/226 (28%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR E+I++ G+ +PL A TS+ ++
Sbjct: 4 KIIFTREQAPNSAWLEEIRRAGFETHHVPLIRCQSLPLPEDVQAALPEADWAFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L P + ++
Sbjct: 64 EAFSPYLKADYQIATIGPQTSQALDKLGRACDFQASS--HYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHEVWAWPMYETTSNPAGQDQLETYLSQEDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQAVKESGYGVDYQPQSPSVEEMV 227
>gi|159028650|emb|CAO88121.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 505
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 71/250 (28%), Gaps = 26/250 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSE 58
IVITR ++ + E +Q G + MP +A Q + + +TS+
Sbjct: 252 IVITRAAEQTSQFSEILQNQGAEVLEMPALEIRPPDRWQGLDDAIAQLQEFDWLILTSAN 311
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+++ I +G+ ++ + +G F D + ++ E
Sbjct: 312 AVNFFFDRLTFWGKDARALATVKIAVVGKKTSQVLHSRGLKADFIPGDFVAD--ALVNEF 369
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
QK L L + + YYS A + + +
Sbjct: 370 PDPIRGQKFLFPRVETGGREILVKELTAKAGQVTEVAAYYSGCPARMDRGIWEAFREGKV 429
Query: 168 DAILFYARSSVLYFFSLPLPA---------KISAAFLCLSNNIASAIPASYKNVVTVACF 218
D + F + +V F+ L + + + V A
Sbjct: 430 DIVTFASSKTVQNFYRLLEQETAELSVNSLLEKVCLASIGPQTSKTCQELFGRVDIEARE 489
Query: 219 PKETSLLKLL 228
L L
Sbjct: 490 YTLEGLTSAL 499
>gi|113476840|ref|YP_722901.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Trichodesmium erythraeum IMS101]
gi|110167888|gb|ABG52428.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Trichodesmium erythraeum IMS101]
Length = 512
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 69/249 (27%), Gaps = 25/249 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I++TR ++ + E ++K G + MP L S+ + +TS+
Sbjct: 259 ILVTRSAGQSSKFSELLKKQGAKVIEMPALVITPPSSWHDLDLGITNINSFDWLILTSTN 318
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I +G+ +A + G F + + ++
Sbjct: 319 GVDYFFERLAEKGKDSRALAGVKIAVVGKKTAESLKTCGLVPDFIPPNFVADS--LVANF 376
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA--YPETTMKNLLQNA 167
+ +K L L + + Y S PE + +
Sbjct: 377 PEKLSGKKILFPRVETGGREVLVKELNSQGAEVIEVAAYESSCPENILPEALLALQNYHI 436
Query: 168 DAILFYARSSVLYFFSLPLPA--------KISAAFLCLSNNIASAIPASYKNVVTVACFP 219
D I F + +V F L + + + + + V A
Sbjct: 437 DVITFASSKTVKNFCYLIGENKDKLPEDLLENICIASIGPQTSQSCHSLLGRVDVEAQEY 496
Query: 220 KETSLLKLL 228
L K +
Sbjct: 497 TLDGLTKAI 505
>gi|90414240|ref|ZP_01222220.1| hypothetical uroporphyrinogen III synthase [Photobacterium
profundum 3TCK]
gi|90324687|gb|EAS41228.1| hypothetical uroporphyrinogen III synthase [Photobacterium
profundum 3TCK]
Length = 251
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 61/246 (24%), Gaps = 16/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M I+ITRP +++ G + PL E L ++ + + S
Sbjct: 1 MTILITRPEPDCHELTQQLNAAGINAIAQPLLTIKAGNELPDLINQLKNLKTDDFLIVIS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + ++ Q + ++ +
Sbjct: 61 VHAVNLAHNYLMSQDVCWPKNVHYIAVGHKTAATLKRVTGQKVISPQMRCDSEGLLALPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ + ++ L G L E + + Y +A + Q +
Sbjct: 121 LANVTNRQILILRGNGGRELIHQTLTERNAKVSYCETYQRTWLALNGEALCRTWQAQNVS 180
Query: 171 LF--YARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + Y L S IA+ + + +L
Sbjct: 181 TLVVTSGEQLAYLTHLVPKQYLTWFFQCHLFVPSQRIANQAQSLGYKNFSTVGSASNKAL 240
Query: 225 LKLLPL 230
L
Sbjct: 241 FTFLSK 246
>gi|254230106|ref|ZP_04923502.1| uroporphyrinogen-III synthase [Vibrio sp. Ex25]
gi|262392879|ref|YP_003284733.1| uroporphyrinogen-III synthase [Vibrio sp. Ex25]
gi|151937351|gb|EDN56213.1| uroporphyrinogen-III synthase [Vibrio sp. Ex25]
gi|262336473|gb|ACY50268.1| uroporphyrinogen-III synthase [Vibrio sp. Ex25]
Length = 242
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 67/241 (27%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-DRESVFLAMQQSYGAIAITSSES 59
M +++TRP ++ +++ G PL + ++ + S +
Sbjct: 1 MAVLVTRPGEQGNALCSLLERHGISAYHHPLIDIVADLTDTHLSKHLHQAQIVIAVSRHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + TQ + ++ ++
Sbjct: 61 VQCAQQILASNGMSWPKQAIYLAVGQKTAHYLSKCTQQKVHYPQVSDSEHLLRLPELNNV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
Q+ ++ L G +D L+ + + Y + I + + +L + I+
Sbjct: 121 AQQQVLILRGNGGRELIKDALVRRGAKVHYSETYKREFIPFDPVSCVSLWKTLQIDQIIV 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y S +++ S IA V LL L
Sbjct: 181 TSGEQLDYLCSQLTSEQLTWLNQQELYIPSQRIADIALQRGFTRVRCTGSASNQELLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|170724849|ref|YP_001758875.1| uroporphyrinogen III synthase HEM4 [Shewanella woodyi ATCC 51908]
gi|169810196|gb|ACA84780.1| Uroporphyrinogen III synthase HEM4 [Shewanella woodyi ATCC 51908]
Length = 243
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 76/242 (31%), Gaps = 13/242 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR---ESVFLAMQQSYGAIAITSS 57
M +++TRP + E + ++G ++ PL + + +A + I S+
Sbjct: 1 MKLLLTRPKGRNQSMSEALTQLGVPYIITPLLEVQASKTHQDQDAIAHFNAADIIIFIST 60
Query: 58 ESLSTLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
++ + +A+G+A+ + F + ++ +
Sbjct: 61 NAVEFSSQVIELKKHKTAQFYAVGDATFQA-LKALGIDAFAAPSDCQQTEGLLTLADLQE 119
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE-TTMKNLLQNADAILF 172
+ ++ + G + L + + + Y A E T + D I+
Sbjct: 120 LTGQNIMIVRGVGGRETLAEKLTQRGAKVNYWETYQRACPAINERTPYLWHDEKVDTIII 179
Query: 173 YARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + L + + S+ + A VT A ++L L
Sbjct: 180 TSGEILHSLIKLVPKELFAWLRACHIIVPSSRVKEQALAYGLEHVTNAKAANSKAMLSAL 239
Query: 229 PL 230
L
Sbjct: 240 GL 241
>gi|261210173|ref|ZP_05924470.1| uroporphyrinogen-III synthase [Vibrio sp. RC341]
gi|260840713|gb|EEX67262.1| uroporphyrinogen-III synthase [Vibrio sp. RC341]
Length = 242
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + +Q+ G + PL + LA S+ I S +
Sbjct: 1 MTVLVTRPNEQGIELCQLLQQQGITALHHPLISISASPQLPELAEDLSSFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + Q + ++ + +
Sbjct: 61 VTFSDQFLQHRRICWPNHAVYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALEALRHV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ L G L+E +R + Y ++ + Q+A ++
Sbjct: 121 AGKRILILRGNGGRELIYSTLVERGATVRYQEAYCRSELPFSAAECVPQWQHAGVSSLVI 180
Query: 173 YARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F S P L S I + + L+ L
Sbjct: 181 TSSEQLAFFVSQLNDGYLPWAQQLTLLVPSQRITEHAHNLGFHRIVTTPSAANRDLMVAL 240
>gi|258626631|ref|ZP_05721461.1| uroporphyrinogen-III synthase [Vibrio mimicus VM603]
gi|258581135|gb|EEW06054.1| uroporphyrinogen-III synthase [Vibrio mimicus VM603]
Length = 242
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 70/240 (29%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP + + + + + G + PL + LA S+ I S +
Sbjct: 1 MTVLVTRPDVQGIELCQLLHQQGITALHHPLITISASPQLPELAKDLASFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + Q + ++ + +
Sbjct: 61 VTFSDQFLQHRRICWPNSAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALEALRHV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ L G L+E +R + Y ++ + T Q+A ++
Sbjct: 121 AGKKILILRGNGGRELIYSTLVERGATVRYQEAYCRSELPFSATECVPKWQHAGVSSLVI 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F S + + L S IA + + L+ L
Sbjct: 181 TSSEQLAFFVSQLNGSNLEWVQHLTLLVPSQRIAELAHNLGFHRIVTTPSAANRDLVVAL 240
>gi|189220197|ref|YP_001940837.1| Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase
[Methylacidiphilum infernorum V4]
gi|189187055|gb|ACD84240.1| Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase
[Methylacidiphilum infernorum V4]
Length = 514
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 72/246 (29%), Gaps = 21/246 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-----QQSYGAIAITS 56
+V+TR + + R +K+Q++G + +P + + Y + TS
Sbjct: 260 RVVVTRTKEGSARIAKKLQELGAEVLEIPTIRIVPSSLGDEQIRRLKKIEAFYDWLLFTS 319
Query: 57 SESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ ++ R I AIG +A + + + +
Sbjct: 320 PTGVEIFFGHYLRLTGDIRGLKGIKIGAIGLTTAQAIGRYHLAVEVIPEKFTSM--DLAR 377
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + + +L + Y Q + Q
Sbjct: 378 CFLGKNIEGERFLLPRSTMADEGIVKFLTSLGACVEQWALYDIQPETEDFRGGREKFQKE 437
Query: 168 --DAILFYARSSVLYFFSL---PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D ILF + SSV Y+ L + + + A+ ++ V +
Sbjct: 438 GADWILFASASSVKYWNRLNLSCHDTSLLPKVISIGPQTTRALQDLHQEVYRESKIHTID 497
Query: 223 SLLKLL 228
L++ L
Sbjct: 498 GLIETL 503
>gi|52424330|ref|YP_087467.1| HemD protein [Mannheimia succiniciproducens MBEL55E]
gi|52306382|gb|AAU36882.1| HemD protein [Mannheimia succiniciproducens MBEL55E]
Length = 249
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 69/238 (28%), Gaps = 16/238 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M +++TRP +K ++ + + K G + +P RE L + + S
Sbjct: 1 MAVLVTRPAEKGIQLVDMLNKSGVAALHLPFFNITAGRELNDLPNKFNQLKPNDYVVAVS 60
Query: 57 SESLSTLPA------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + L Q H S N ++ +
Sbjct: 61 QSAVDFAAETLQNTGFHWRTDLQYFTVGQQTALHFASLSEQPVHYPFLSENSEGMLALAQ 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L G F ++ + +++CY Q I Y E T
Sbjct: 121 MQNLKGKNVLLLRGNSGRELFPQQVLARGGDIDILECYQRQPIDYDNVEQTSICKRAGIQ 180
Query: 169 AILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
I+ + + S + +S I + + V+
Sbjct: 181 TIVVTSGELLNTLIQFVPENEYDWLRSCQLVVVSTRIENMARKFGWTDIVVSPKADNN 238
>gi|257063873|ref|YP_003143545.1| uroporphyrin-III C-methyltransferase [Slackia heliotrinireducens
DSM 20476]
gi|256791526|gb|ACV22196.1| uroporphyrin-III C-methyltransferase [Slackia heliotrinireducens
DSM 20476]
Length = 546
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 63/260 (24%), Gaps = 32/260 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
IV+TR +A ++ +G V +P + Y + TS
Sbjct: 284 RIVVTRSRTQAGTFSVLLRDLGADVVEIPTIEICDPSSFDVIDAAIERIADYDWLVFTSV 343
Query: 58 ESLSTLPANFCRHT--------------------PIFAIGEASACLARQKGFTQIFHGKD 97
+ + AIG A+A + G +
Sbjct: 344 NGVDRFFKRLAEPCASAVGGSPKQTRDTRTLAGLRVAAIGPATADALTRHGIMPDAVPGE 403
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP- 156
A + ++ K + L E V Y ++ A
Sbjct: 404 YRAE-AVFDAMRAAGLAAGDKILIARAKEARETLPEMLAEAGCEATVAPVYETRRPADEQ 462
Query: 157 --ETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYK 210
E + + DA+ F + S+ ++ + + +
Sbjct: 463 TAELCGRIVNGEVDAVTFTSSSTARNLVAMLGEGAVETLSKLDLFSIGPITTQTLAKLGL 522
Query: 211 NVVTVACFPKETSLLKLLPL 230
V A L+ +
Sbjct: 523 TNVHQADTYTIPGLVACIRK 542
>gi|328945741|gb|EGG39892.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK1087]
Length = 241
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A+ + TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQAGFETHHVPLIRCQSLPLPEAVQAVLPEADWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L + ++
Sbjct: 64 EAFSPYLKADCQIATIGPQTSQALDKLGRDCAFQASS--HYGLDFIQEWLALALLTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHEVWAWPMYKTTSNPAGQDQLEIYLSQEDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQAVRESGYGVDYQPQSPSVEEMV 227
>gi|262172878|ref|ZP_06040556.1| uroporphyrinogen-III synthase [Vibrio mimicus MB-451]
gi|261893954|gb|EEY39940.1| uroporphyrinogen-III synthase [Vibrio mimicus MB-451]
Length = 242
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 70/240 (29%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP + + + + + G + PL + LA S+ I S +
Sbjct: 1 MTVLVTRPDVQGIELCQLLHQQGITALHHPLITISASPQLPELAEDLASFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + Q + ++ + +
Sbjct: 61 VTFSDQFLQHRRICWPNSAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALEALRHV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ L G L+E +R + Y +++ + T Q+A ++
Sbjct: 121 AGKKILILRGNGGRELIYSTLVERGATVRYQEAYCRRELPFSATECVPKWQHAGVSSLVI 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F S + L S IA + + L+ L
Sbjct: 181 TSSEQLAFFVSQLNGRNLEWVQHLTLLVPSQRIAELAHNLGFHRIVTTPSAANRDLVVAL 240
>gi|296121809|ref|YP_003629587.1| uroporphyrin-III C-methyltransferase [Planctomyces limnophilus DSM
3776]
gi|296014149|gb|ADG67388.1| uroporphyrin-III C-methyltransferase [Planctomyces limnophilus DSM
3776]
Length = 545
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 71/254 (27%), Gaps = 29/254 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
I I RP+++ T + +++G P++MP + + + I TS
Sbjct: 267 RIAIPRPLEQGELTALECEQLGGSPLLMPTISISSIDDWTLVDGIIDRIAEFDWIIFTSV 326
Query: 58 ESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + + IG ++A + F +++ E
Sbjct: 327 NGVRCFMQHLWQRGLDGRELAGCRLAVIGASTAAELEKWHLRADFVPS---QFRGEVLAE 383
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
+ I+ + L + + Y ++D+ L
Sbjct: 384 ELAQQFSAGRAIWFRANRGREVIPERLQKAGWSMETAVVYRNEDVTSWPADFWEKLSRKE 443
Query: 168 -DAILFYARSSVLYFFSLPLPAKISA-----------AFLCLSNNIASAIPASYKNVVTV 215
D I + S + L + F+ +S A + ++
Sbjct: 444 VDWIALSSPSMARNWKKLLDAYLRESGRNASEFINAARFVSISPVTTQAALEAGLSISAE 503
Query: 216 ACFPKETSLLKLLP 229
A + + +
Sbjct: 504 ASVFTWEGIFRAIA 517
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 24/80 (30%), Gaps = 6/80 (7%)
Query: 158 TTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKN 211
+ + + D I+F + + V F + + + A+ + +
Sbjct: 309 DGIIDRIAEFDWIIFTSVNGVRCFMQHLWQRGLDGRELAGCRLAVIGASTAAELEKWHLR 368
Query: 212 VVTVACFPKETSLLKLLPLR 231
V + L + L +
Sbjct: 369 ADFVPSQFRGEVLAEELAQQ 388
>gi|307266128|ref|ZP_07547672.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306918818|gb|EFN49048.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 497
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 76/239 (31%), Gaps = 18/239 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSES 59
I++TR +++ + ++ + + G V+ P +++ FL + TS
Sbjct: 254 RILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFSDNIVKFLEEIHKFDYAVFTSVNG 313
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + AIG +A ++ + +++ V
Sbjct: 314 VWSFIEASREKRFDLRNLSIKVVAIGSKTAEALENIFIYPDIIPEEYTSYSLANALKKHV 373
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAI 170
I L +E+ ++ I Y ++ + + + L+ D
Sbjct: 374 E----GKNIALLTSQIGGDILMESLENCANVQKIVAYKNEPNYEIKGNLISELRKGIDIA 429
Query: 171 LFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+F + S+ Y L ++ + AI +V T+ L++
Sbjct: 430 VFTSSSTFNYMHQLIGDEINLLKNSKIAAIGPVTKKAIEDKGFDVDTMPSEYTTGKLIE 488
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/135 (11%), Positives = 35/135 (25%), Gaps = 5/135 (3%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L + + K ++ ++ + L E + V +
Sbjct: 238 LRDRLKWYENKKLFGKRILLTRTYEQSQQMKKILSEEGADVVVCPTIKITPFSDNIVKFL 297
Query: 162 NLLQNADAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ D +F + + V F +S + + + A A+ + +
Sbjct: 298 EEIHKFDYAVFTSVNGVWSFIEASREKRFDLRNLSIKVVAIGSKTAEALENIFIYPDIIP 357
Query: 217 CFPKETSLLKLLPLR 231
SL L
Sbjct: 358 EEYTSYSLANALKKH 372
>gi|119897285|ref|YP_932498.1| HemD protein [Azoarcus sp. BH72]
gi|119669698|emb|CAL93611.1| HemD protein [Azoarcus sp. BH72]
Length = 265
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 18/246 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
+ +TRP +AL E I++ G ++ P+ + L A + S
Sbjct: 19 VAVTRPEAQALSLCEAIRRAGGQVLLFPVLAIGAVEDPAALDEAIARLDHFDLAFFVSPN 78
Query: 59 SLST------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI-IVEQKV 111
++ ++ + +G+ S R+ GF+ + + + A + +
Sbjct: 79 AVEHALAAVKARRHWPERLEVSTVGKGSERALREAGFSAVIAPSEGFDSEAVLALPAFSA 138
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADA 169
+ ++ G D L + + CY A + DA
Sbjct: 139 TAINGRRVVIFRGDGGRELLADALRARGAVVEQVSCYRRYRPAADAAPLIQAAGTGRLDA 198
Query: 170 ILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ + V + I + A+ + V P + LL
Sbjct: 199 LVLTSSEGVRNLVEMVGEKGFGVLRRVTVFAPHPRIVAHARAAGFDRVEETP-PGDDGLL 257
Query: 226 KLLPLR 231
+ L
Sbjct: 258 ETLVRH 263
>gi|254559411|ref|YP_003066506.1| uroporphyrinogen III synthase [Methylobacterium extorquens DM4]
gi|254266689|emb|CAX22469.1| putative uroporphyrinogen III synthase [Methylobacterium extorquens
DM4]
Length = 237
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 92/240 (38%), Gaps = 17/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I ++RP A RT ++ ++G+ ++ P+ + + +TS+ +
Sbjct: 1 MRIWVSRPEPGASRTARRLAELGHAALVAPVLRIAPGDGP---PPTGRFDGLILTSANAA 57
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ L A P+FA+G +A A + G + ++++LA+++ P L+
Sbjct: 58 APLAAAGLPEAPVFAVGTRTAERAERAGLRSVHCADGDAVSLARLVAAHV---RPGGTLL 114
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD------AILFYA 174
+ G+ R L + Y + A + L D A L ++
Sbjct: 115 HAAGEDRKAEPAASLTAAGYRVTTWTAYAALAEATLPEPVVQGLMGGDGAPPLAAALHFS 174
Query: 175 RSSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
R S L A +S AF CLS ++A + VA P E +LL L
Sbjct: 175 RRSAEIAVHLSGKAGLSGAFRALAHYCLSPDVALGLVELGVAAHFVAARPSEEALLAGLA 234
>gi|325688054|gb|EGD30073.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK72]
Length = 241
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 68/226 (30%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR E+I++ G+ +PL A+ + TS+ ++
Sbjct: 4 KIIFTREQAPDSTWLEEIRRAGFETHHVPLIRCQSLPLPEAVQAILPEANWVFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + + + +S I E L P + ++
Sbjct: 64 EAFNPYLKADYQIATIGPQTSQALDK--LGRACDFESSSHYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHEVWAWPMYETTSNPAGQDQLETYLSQKDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLATSHRIAVIGQTTAQAVKESGYGVDYQPQSPSVEEMV 227
>gi|119776387|ref|YP_929127.1| uroporphyrinogen-III synthase [Shewanella amazonensis SB2B]
gi|119768887|gb|ABM01458.1| uroporphyrinogen-III synthase [Shewanella amazonensis SB2B]
Length = 239
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 63/237 (26%), Gaps = 9/237 (3%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSES 59
M +++TRP K + + ++ PL + L + S+ +
Sbjct: 1 MKLLLTRPEGKNAAMASALDALAIPYLVEPLLSVEAAAVTQAQLDELSRADILIFISTSA 60
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIF--HGKDNSINLAKIIVEQKVLFTPQK 117
+S P A I +S ++ + K
Sbjct: 61 VSFATPWLKDQWPKATYYAVGDATADALALQGITAERSPADSQATEGLLTLPSLEQVSGK 120
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYAR 175
++ + GK D L + ++ Y + Q+ I+ +
Sbjct: 121 QIVIVRGKGGREAMADGLRLRGANVSYLEVYQRACPPLDAPASVSRWQSFGIDTIVVTSG 180
Query: 176 SSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +L + S + + VT A + ++L L
Sbjct: 181 EVLENLINLVPKDSFAWLRDCHIIVPSARVETQARKKGLRRVTNAGAANQAAVLDAL 237
>gi|152997594|ref|YP_001342429.1| uroporphyrinogen III synthase HEM4 [Marinomonas sp. MWYL1]
gi|150838518|gb|ABR72494.1| Uroporphyrinogen III synthase HEM4 [Marinomonas sp. MWYL1]
Length = 250
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/243 (13%), Positives = 77/243 (31%), Gaps = 21/243 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-------SVFLAMQQSYGAIAI 54
I+ITRP + ++E+++ G++ V +P+ + + ++ +
Sbjct: 5 RILITRPEPENSLSRERVRAYGWVAVPLPMLEIKPVEDVNKKATIRAQIFDIDTFDYVIF 64
Query: 55 TSSESLSTLPANFCRHTPIFAIGEA-------SACLARQKGFTQIFHGKDNSINLAKIIV 107
S + P+ + +G I + + L + +
Sbjct: 65 VSKNAARLACDWLDECWPMIPTNVHWIGIGQGTTQTLLNEGIPAISNPGHTTETLLEWLK 124
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
K+ + ++ + G+ + L E + + Y + Y T +L +
Sbjct: 125 PAKMKD---QKVLIIRGEGGRPELANKLEERGAKVSYLSLYDRKKPIYYAQTFF-MLPDI 180
Query: 168 DAILFYARSSVLYF---FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ I + S+ SL P + L S + + A + SL
Sbjct: 181 NLIWITSGESLRNLSEYVSLHKPEWKTLPILTPSIRVNQQAKEMGWINASCANGADDNSL 240
Query: 225 LKL 227
+K
Sbjct: 241 IKA 243
>gi|118444865|ref|YP_878762.1| uroporphyrinogen III synthase/methyltransferase [Clostridium novyi
NT]
gi|118135321|gb|ABK62365.1| uroporphyrinogen III synthase/methyltransferase [Clostridium novyi
NT]
Length = 497
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 75/245 (30%), Gaps = 16/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
IV+TR ++ +KI +G P+ +P E L + Y + TS
Sbjct: 253 NIVVTRARAQSSTLVDKIDSLGGNPIEIPSIKIEEILERDELIEEIKNIEKYSYLIFTSR 312
Query: 58 ESLSTLPANFCRHTPIFAIGEASAC------LARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+++ N + + + I +A+ IVE
Sbjct: 313 NAVNIFFENLFKLGFDSRKLGNLKIVSIGNGTSEELKNKGIVADIVPKRFVAESIVESLK 372
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA-- 169
+ I + + + + ++ + Y + + + + NLL +
Sbjct: 373 DILSKDDKILIPRAKESREYLTQELSKLCNVKEVKIYETIKMQNNKEYVLNLLDSDAIDY 432
Query: 170 ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
I F + S+V F + I + + + I V A +L
Sbjct: 433 ITFTSSSTVKNFIDIIGKENIDKLKGTKLVSIGPITSRTIEDFNLKVYNEAEEYTIDGIL 492
Query: 226 KLLPL 230
K+L
Sbjct: 493 KVLQK 497
>gi|325693628|gb|EGD35547.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK150]
Length = 241
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 64/226 (28%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQAGFETHHVPLIRCQTLPLPEDVQAALPEADWAFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L P + ++
Sbjct: 64 EAFSPYLKADYQIATIGPQTSQALDKLGRACDFQASS--HYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-AILFYARSSVL 179
N + L E + Y + + ++ L + F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHDVWAWPMYETTSNPAGQDQLETYLSQEEVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPHLASSHQIAVIGQTTAQAVKESGYGVDYQPQSPSVEEMV 227
>gi|88861268|ref|ZP_01135900.1| uroporphyrinogen-III synthase HemD (N terminal)/Uroporphyrin-III
C-methyltransferase (C terminal) [Pseudoalteromonas
tunicata D2]
gi|88816749|gb|EAR26572.1| uroporphyrinogen-III synthase HemD (N terminal)/Uroporphyrin-III
C-methyltransferase (C terminal) [Pseudoalteromonas
tunicata D2]
Length = 614
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 84/241 (34%), Gaps = 14/241 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-ESVFLAMQQSYGAIAITSSESLS 61
I++TRP K +++K+G+ + PL S LA + S +++
Sbjct: 4 ILVTRPDTKGAELVAQLKKLGHHAISFPLLALEPLAVSSAALAPLGEADKLIFISQDAVK 63
Query: 62 TLP---ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
L N FA+GE +A + + + K + ++ +++ Q+
Sbjct: 64 ALYALKPNLKHQPQFFAVGEKTAAVIAELFGVKARIAK--PQDSEGLLALKELQHIEQQN 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
++ L G+ L + + + Y Q + + Q I+ + +
Sbjct: 122 IVLLKGQDGRPLIAQKLKQRGAFVHAVVLYRRQPVKGVASGWIKQWQQQKIDSIVLTSNA 181
Query: 177 SVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYK--NVVTVACFPKETSLLKLLPL 230
+V F ++ F S IA+ + N + + + ++L +
Sbjct: 182 AVDAIFRELAENEVKWLKTCRFYVASERIANYLSQFAIAANNIQICAGASDEAILTAISQ 241
Query: 231 R 231
+
Sbjct: 242 Q 242
>gi|217975049|ref|YP_002359800.1| Uroporphyrinogen III synthase HEM4 [Shewanella baltica OS223]
gi|217500184|gb|ACK48377.1| Uroporphyrinogen III synthase HEM4 [Shewanella baltica OS223]
Length = 246
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/246 (12%), Positives = 63/246 (25%), Gaps = 16/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSE 58
M +++TRP + + + + G + PL + S+
Sbjct: 1 MKVLLTRPEGRNQSMVDALNERGIAHWVTPLLCVEATPAIATNTPHPLAHADMVICISAN 60
Query: 59 SLSTLPANFCRHTPIFAIGE--------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ P + A + D+ ++
Sbjct: 61 AVTFADNALTTTNPPHKAWPPAQYFAVGHATWKALDQLGISALEAPDDCQQTEGLLTLAP 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + + G + L LR + Y + Q
Sbjct: 121 LQEIKGKQITIIRGVGGREALAEQLAARGAHLRYWEVYQRACPPLDGQQLALQWQAFGID 180
Query: 170 -ILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + +L S + SN + + A VT A ++
Sbjct: 181 TIVVTSGEVLDNLINLVPKELFAWLRSCHIIVPSNRVEAQAHAFGITQVTNANAANSKAV 240
Query: 225 LKLLPL 230
L L L
Sbjct: 241 LNALKL 246
>gi|91774390|ref|YP_544146.1| uroporphyrinogen-III synthase [Methylobacillus flagellatus KT]
gi|91708377|gb|ABE48305.1| uroporphyrinogen-III synthase [Methylobacillus flagellatus KT]
Length = 256
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/246 (12%), Positives = 74/246 (30%), Gaps = 18/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+I ITRP+ +A R I+ G + PL ++ L + SS
Sbjct: 8 HIAITRPLDQATRLTSMIEAAGGHAIGFPLIAIAPLQDYSSFEQTLDEVTMQDWLIFISS 67
Query: 58 ESLSTLPANFCRHTPIFAIGEASACL-------ARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + P + + + ++ + ++ +
Sbjct: 68 NAVQHAMSRLQAKLPQWPPAKPQFAAIGPVTASQLMQYGITNVLQPEHRFDSESLLALPQ 127
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-- 168
+ ++ + G D L + +R +CY + +++L N
Sbjct: 128 MQAVKGLRIMIVRGVGGRELMADTLRDRGAEVRFAECYRRINPQADAGKLQSLWHNGQLD 187
Query: 169 AILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + ++ ++ IA + V +A P + ++
Sbjct: 188 TIVVTSSEAMRNLLAMTGSGTAEWLRDITICVNHARIAELPSSLGLR-VLIASAPGDDAM 246
Query: 225 LKLLPL 230
++ L
Sbjct: 247 MQCLSK 252
>gi|210621717|ref|ZP_03292766.1| hypothetical protein CLOHIR_00711 [Clostridium hiranonis DSM 13275]
gi|210154599|gb|EEA85605.1| hypothetical protein CLOHIR_00711 [Clostridium hiranonis DSM 13275]
Length = 498
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 76/244 (31%), Gaps = 20/244 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAITSSE 58
+V+TR K++ EKI +G V +P+ + ++ + + Y I TS
Sbjct: 254 KVVVTRARKQSSDLSEKINSLGGKAVELPVIKIEKNDDTELRKEIENLRDYTHIVFTSRN 313
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + +IG ++ ++G + +A+ + E+
Sbjct: 314 GVELFFETLDDMGLDSRVFFGVKVCSIGAGTSEELMKRGIKADIVPE---RFVAESLFEE 370
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-NAD 168
I + F ++ + + Y + +++L+ + D
Sbjct: 371 MKKTVKSSDRILIPRSENAREFLADKLKEICEVTEVFSYKTVIDEKSREIAEDVLKSDVD 430
Query: 169 AILFYARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ F + S+V + + + + I V A +
Sbjct: 431 YVTFTSSSTVKNLVEIAGENYKELLEGKKLVSIGPVTSRTIEEFGLEVYKEAEVSTIQGV 490
Query: 225 LKLL 228
+ +L
Sbjct: 491 MDVL 494
>gi|149908496|ref|ZP_01897158.1| hypothetical uroporphyrinogen III synthase [Moritella sp. PE36]
gi|149808330|gb|EDM68267.1| hypothetical uroporphyrinogen III synthase [Moritella sp. PE36]
Length = 255
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 69/247 (27%), Gaps = 19/247 (7%)
Query: 1 MYI--VITRPIKKALRTQEKIQKMGYIPVMMPLSYF----IHDRESVFLAMQQSYGAIAI 54
M I +ITRP K + +I+ + P + S LA Q I
Sbjct: 1 MKIRALITRPRVKGEQLARQIEAADGAALCCPFIDISAGQQFTKVSSLLAELQPDDYIIA 60
Query: 55 TSSESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVE 108
S +++ + + + L+ QK D ++
Sbjct: 61 ISDNAVNYANTSLINANRTWPQQINYIAVGPTTALSWQKYGINHAQIPDTHD-SEGVLKL 119
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
K ++ L G + L + + + Y Y + N Q
Sbjct: 120 LANASVEHKKIVILRGNGGRETLAEDLTKRTANVTYCEVYQRTAPDYDPDMLINKWQQFA 179
Query: 169 A--ILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
++ + + P ++ F+ S IA+ VT+A
Sbjct: 180 INSVIITSGEILGNLIKTIPYTALPWILNLHFIVPSQRIAALAHTLGIEHVTIATGASNN 239
Query: 223 SLLKLLP 229
SL +
Sbjct: 240 SLFNAIK 246
>gi|304412541|ref|ZP_07394147.1| Uroporphyrinogen III synthase HEM4 [Shewanella baltica OS183]
gi|307307200|ref|ZP_07586938.1| Uroporphyrinogen III synthase HEM4 [Shewanella baltica BA175]
gi|304349183|gb|EFM13595.1| Uroporphyrinogen III synthase HEM4 [Shewanella baltica OS183]
gi|306910439|gb|EFN40870.1| Uroporphyrinogen III synthase HEM4 [Shewanella baltica BA175]
Length = 246
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 63/246 (25%), Gaps = 16/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSE 58
M +++TRP + + + + G + PL I S+
Sbjct: 1 MKVLLTRPEGRNQSMVDALNERGIAHWVTPLLCVEATPAIATNTPHPLAHADMIICISAN 60
Query: 59 SLSTLPANFCRHTPIFAIGE--------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ P + A + D+ ++
Sbjct: 61 AVTFADNALTTINPPHKAWPPAQYFAVGHATWKALDQLGISALEAPDDCQQTEGLLTLAP 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + + G + L LR + Y + Q
Sbjct: 121 LQEIKGKQITIIRGVGGREALAEQLAARGAHLRYWEVYQRACPPLDGQQLALQWQAFGID 180
Query: 170 -ILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + +L S + SN + + A VT A ++
Sbjct: 181 TIVVTSGEVLDNLINLVPKELFAWLRSCHIIVPSNRVEAQAHAFGITQVTNANAANSKAV 240
Query: 225 LKLLPL 230
L L L
Sbjct: 241 LNALKL 246
>gi|282856540|ref|ZP_06265814.1| porphyrin biosynthesis protein HemD [Pyramidobacter piscolens
W5455]
gi|282585606|gb|EFB90900.1| porphyrin biosynthesis protein HemD [Pyramidobacter piscolens
W5455]
Length = 483
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 67/233 (28%), Gaps = 14/233 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP + R ++ +G V P + L + I TS+ +
Sbjct: 255 KVLVTRPANRQGRLSRMLRDLGAEVVEFPCIAAVPLETK--LPPLDVHDWIGFTSATGVE 312
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA----KIIVEQKVLFTPQK 117
A ++ A + +L + L
Sbjct: 313 CFFARLTAEGRDVRELGSAKIAAVGPATAAALRERGLRPDLIPAVYDGVHLGAELAKRGG 372
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + + L + + Y ++ +A P + DA+LF + S+
Sbjct: 373 SVLLFRALDGSPELTETLRGRGVDFDEVPLYRTETLAAPFQPA-----DVDAVLFTSAST 427
Query: 178 VLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
V F + A C+ A + VA L+ +L
Sbjct: 428 VRGFKKACP--GLEAPLACCIGVQTAREAERLGLKNIRVAARATLEDLVNILK 478
>gi|28899763|ref|NP_799368.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus RIMD
2210633]
gi|153838748|ref|ZP_01991415.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus AQ3810]
gi|260365169|ref|ZP_05777734.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus K5030]
gi|260878131|ref|ZP_05890486.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus AN-5034]
gi|260895812|ref|ZP_05904308.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus Peru-466]
gi|260900855|ref|ZP_05909250.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus AQ4037]
gi|28808015|dbj|BAC61252.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus RIMD
2210633]
gi|149747834|gb|EDM58718.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus AQ3810]
gi|308087198|gb|EFO36893.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus Peru-466]
gi|308092779|gb|EFO42474.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus AN-5034]
gi|308110602|gb|EFO48142.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus AQ4037]
gi|308111046|gb|EFO48586.1| uroporphyrinogen-III synthase [Vibrio parahaemolyticus K5030]
Length = 242
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 66/241 (27%), Gaps = 12/241 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-DRESVFLAMQQSYGAIAITSSES 59
M +++TRP ++ +++ G PL + ++ + S +
Sbjct: 1 MAVLVTRPGEQGSALCSLLERHGISAHHHPLIDIVADLTDTHLTTHLHQAQIVIAVSRHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + TQ + ++ +
Sbjct: 61 VQCAQQILTSNGASWPKQAVYLAVGQKTAHYLSKCTQQKVHYPEVSDSEHLLRLPALQNV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
Q+ ++ L G +D L+ + + Y + I + + +L + I+
Sbjct: 121 EQQQVLILRGNGGRELIKDALVRRGAKVHYSETYKREFILFDPVSCVSLWKTLQINQIVV 180
Query: 173 YARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y S +++ S IA V LL L
Sbjct: 181 TSGEQLDYLCSQLTSEQLAWLNQQELYIPSQRIADIAIQRGFTRVRCTGSASNQELLAAL 240
Query: 229 P 229
Sbjct: 241 Q 241
>gi|262163678|ref|ZP_06031419.1| uroporphyrinogen-III synthase [Vibrio mimicus VM223]
gi|262027894|gb|EEY46558.1| uroporphyrinogen-III synthase [Vibrio mimicus VM223]
Length = 242
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP + + + + + G + PL + LA S+ I S +
Sbjct: 1 MTVLVTRPDVQGIELCQLLHRQGITALHHPLITISASPQLPELAEDLASFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + Q + ++ + +
Sbjct: 61 VTFSDQFLQHRRICWPNSAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALEALRHV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ L G L+E +R + Y ++ + T Q+A ++
Sbjct: 121 AGKKILILRGNGGRELIYSTLVERGATVRYQEAYCRSELPFSATECVPKWQHAGVSSLVI 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F S + L S IA + + L+ L
Sbjct: 181 TSSEQLAFFVSQLNGRNLEWVQQLTLLVPSQRIAELAHNLGFHRIVTTPSAANRDLVVAL 240
>gi|283782391|ref|YP_003373146.1| uroporphyrin-III C-methyltransferase [Pirellula staleyi DSM 6068]
gi|283440844|gb|ADB19286.1| uroporphyrin-III C-methyltransferase [Pirellula staleyi DSM 6068]
Length = 505
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 71/241 (29%), Gaps = 18/241 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
+++TRP ++A ++++G ++ P +S L ++Y + S+
Sbjct: 261 VLVTRPAQQAESLARPLEELGAAVLLDPAIVIGMPEDSAPLVQAIHTLETYDWLVFASAS 320
Query: 59 SLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ H + +G ++ + ++ A+ +
Sbjct: 321 GVEKFFEQLISLGYDLRKLAHIRLAVVGSGTSAALEKLHLRADLVPENFE---AESLAAM 377
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
K ++ + L + + Y S D P+ + L
Sbjct: 378 LAPEAAGKRVLIVRASRGREVLPQLLANSGAGVEQVVAYESVDNLVPDPLVVQRLTERKI 437
Query: 170 --ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
I + + + SA LS ++ I + V A L++
Sbjct: 438 DYISVTSSAIATSLVNRYGDLLRSAKLASLSPITSATIRSLGHEVAVEATLYTMAGLVEA 497
Query: 228 L 228
+
Sbjct: 498 I 498
>gi|258623141|ref|ZP_05718153.1| uroporphyrinogen-III synthase [Vibrio mimicus VM573]
gi|258584624|gb|EEW09361.1| uroporphyrinogen-III synthase [Vibrio mimicus VM573]
Length = 242
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP + + + + + G + PL + LA S+ I S +
Sbjct: 1 MTVLVTRPDVQGIELCQLLHQQGITALHHPLITISASPQLSELAEDLASFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + Q + ++ + +
Sbjct: 61 VTFSDQFLQHRRICWPNSAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALEALRHV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ L G L+E +R + Y ++ + T Q+A ++
Sbjct: 121 AGKKILILRGNGGRELIYSTLVEKGATVRYQEAYCRSELPFSATECVPKWQHAGVSSLVI 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +F S + L S IA + + L+ L
Sbjct: 181 TSSEQLAFFVSQLNGRNLEWVQHLTLLVPSQRIAELAHNLGFHRIVTTPSAANRDLVVAL 240
>gi|218192221|gb|EEC74648.1| hypothetical protein OsI_10298 [Oryza sativa Indica Group]
Length = 302
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 74/242 (30%), Gaps = 16/242 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
+V+TR K + ++K + +PL + ++ L + + I ITS E+
Sbjct: 49 VVVTRERGKNAKLIAALEKHNVQSLELPLIKHVEGPDTDRLSAVLRDEKFDWITITSPEA 108
Query: 60 LSTLPANF----CRHTPIFAIGEASACLARQKGFTQI----FHGKDNSINLAKIIVEQKV 111
+ + I +G + + + + + E
Sbjct: 109 AAVFLEGWKAAGNPKVRIAVVGAGTERVFDEVIQYNDGSLEVAFSPSKAMGKFLASELPR 168
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++Y ++ L + ++ Y + + + + +A +
Sbjct: 169 TTETTCKVLYPASAKAGHEIQNGLSNRGFEVTRLNTYTTVPVQDVDPLILKPALSAPVVA 228
Query: 172 FYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S++ + +L A C+ ASA + P S+L+
Sbjct: 229 VASPSALRAWLNLASQVDNWGNAIACIGETTASAAKKFGLKSIYYPTTPGLDGWVESILE 288
Query: 227 LL 228
L
Sbjct: 289 AL 290
>gi|326792715|ref|YP_004310536.1| uroporphyrin-III C-methyltransferase [Clostridium lentocellum DSM
5427]
gi|326543479|gb|ADZ85338.1| uroporphyrin-III C-methyltransferase [Clostridium lentocellum DSM
5427]
Length = 505
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 75/254 (29%), Gaps = 28/254 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
IV+TR K++ + E I +G + P +E+ V + + Y + TS
Sbjct: 255 IVVTRTRKQSSQLMEMINDLGGRAIEFPTIEITPIKENTRLKVAIEHLKQYTYLVFTSPN 314
Query: 59 SLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ H I IGEA+ +QKG +A+ + +
Sbjct: 315 AVEVFFEALEASGKDARVLAHLKIAVIGEATKKALKQKGIVADRMPTK---AVAESLADC 371
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI------AYPETTMKNL 163
K I L +E + I Y + + +
Sbjct: 372 LKKELTNKDYILLPDSAIAREGLVSSLEAVCKVDEIPLYTTVPVRNVAKGEMSSKELVER 431
Query: 164 LQNADA--ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVAC 217
L + + F + S+V + I A + + + V A
Sbjct: 432 LIADEIDYMTFTSSSTVHHLIGRIGQEHIAALAHAKLISIGEITTHTLKTYGLEVYKEAK 491
Query: 218 FPKETSLLKLLPLR 231
T L+ + +
Sbjct: 492 KATMTDLVDCMEEK 505
>gi|18401160|ref|NP_565625.1| HEMD; uroporphyrinogen-III synthase [Arabidopsis thaliana]
gi|75219491|sp|O48721|HEM4_ARATH RecName: Full=Uroporphyrinogen-III synthase, chloroplastic;
Short=AtUROS; AltName: Full=Hydroxymethylbilane
hydrolyase [cyclizing]; AltName:
Full=Uroporphyrinogen-III cosynthase; Flags: Precursor
gi|20196944|gb|AAC14502.2| expressed protein [Arabidopsis thaliana]
gi|109946587|gb|ABG48472.1| At2g26540 [Arabidopsis thaliana]
gi|330252760|gb|AEC07854.1| Uroporphyrinogen-III synthase [Arabidopsis thaliana]
Length = 321
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 77/242 (31%), Gaps = 16/242 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA---MQQSYGAIAITSSES 59
+V+TR K + + ++K G + +PL + LA +S+ I ITS E+
Sbjct: 67 VVVTRERGKNNQIIKALEKNGISSLELPLIQHARGPDFDRLASVLNDKSFDWIIITSPEA 126
Query: 60 ----LSTLPANFCRHTPIFAIGEASA----CLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
L I +G +A + + + E
Sbjct: 127 GSVFLEAWKTASSPEVQIGVVGAGTARVFEEAMKSADGLLHVAFTPSKATGKVLASELPE 186
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ ++Y + L + + ++ Y + + +T + +A +
Sbjct: 187 KVGKRSSVLYPASLKAGNDIVEGLSKRGFEVVRLNTYTTVPVQSVDTVLLQQALSAPVLS 246
Query: 172 FYARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S+V + L + + C+ ASA V P S+++
Sbjct: 247 VASPSAVRAWLHLIQNEEQWSNYVACIGETTASAARRLGLKNVYYPEKPGLEGWVESIME 306
Query: 227 LL 228
L
Sbjct: 307 AL 308
>gi|18694346|emb|CAC85287.1| uroporphyrinogen III synthase [Arabidopsis thaliana]
Length = 321
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 77/242 (31%), Gaps = 16/242 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA---MQQSYGAIAITSSES 59
+V+TR K + + ++K G + +PL + LA +S+ I ITS E+
Sbjct: 67 VVVTRERGKNNQIIKALEKNGISSLELPLIQHARGPDFDRLASVLNDKSFDWIIITSPEA 126
Query: 60 ----LSTLPANFCRHTPIFAIGEASA----CLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
L I +G +A + + + E
Sbjct: 127 GSVFLEAWKTASSPEVQIGVVGAGTARVFEEAMKSADGLLHVAFTPSKATGKVLASELPE 186
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ ++Y + L + + ++ Y + + +T + +A +
Sbjct: 187 KVGKRSSVLYPASLKAGNDIVEGLSKRGFEVVRLNTYTTVPVQSVDTVLLQQALSAPVLS 246
Query: 172 FYARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S+V + L + + C+ ASA V P S+++
Sbjct: 247 VASPSAVRAWLHLIQNEEQWSNYVACIGETTASAARRLGLKNVYYPEKPGLEGWVESIME 306
Query: 227 LL 228
L
Sbjct: 307 AL 308
>gi|291279210|ref|YP_003496045.1| uroporphyrinogen-III synthase [Deferribacter desulfuricans SSM1]
gi|290753912|dbj|BAI80289.1| uroporphyrinogen-III synthase [Deferribacter desulfuricans SSM1]
Length = 240
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 75/234 (32%), Gaps = 7/234 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TR +++ + K G+ P ++PL I +SY I TS S+
Sbjct: 7 NVLVTRQPDQSVEFINLLSKNGFYPFLLPLIETIPLNNKPIR---KSYDYIIFTSENSVR 63
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
+ + R + + N + +I + K +
Sbjct: 64 YFYPLMDSVDFKYVVAVGEKTKKRLEDLNIVVDFVPNEFSADGLIKLYENKDLEGKTFLA 123
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVL 179
K ++Y+ Y + YPE + L + + F + S+V
Sbjct: 124 PTTKKSKDDLKEYIESKGGIFEKCFIYDTTLKKYPEHYIDGFLVENNIDTLTFASPSAVE 183
Query: 180 YFFSLPLPAKISA-AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
FFS + F+ + A + AS + V ++ LL R
Sbjct: 184 SFFSQINNLDKNCYTFVAIGKVTARKLEASGVSCV-FPEKYTILDVIGLLKKIR 236
>gi|119486063|ref|ZP_01620125.1| uroporphyrinogen III methylase [Lyngbya sp. PCC 8106]
gi|119456838|gb|EAW37966.1| uroporphyrinogen III methylase [Lyngbya sp. PCC 8106]
Length = 508
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 26/247 (10%), Positives = 62/247 (25%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--------QSYGAIAI 54
I++TR ++ + E + G + MP + L + + +
Sbjct: 248 ILVTRAAGQSSKFSELLTAEGATVIEMPALVIGPPSSWMALDQAIAHFDGTSPYFHWLIL 307
Query: 55 TSSESLSTLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVE 108
TS+ ++ + A ++ +A +V
Sbjct: 308 TSANGVNFFFDRLQAKGKDPHALSQTKIAVVGKKTAASLQKYELQPDLIPPDFVADSLVS 367
Query: 109 QKVLFTPQKPLIYLGGKP-RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
K +++ + L + + + Y S+ + LQ
Sbjct: 368 HFPESLAGKRILFPRVETGGRDVLVQELTQQGAEVVEVPAYESRCPDTIAPDVLEALQQH 427
Query: 168 DA--ILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
I F + +V F L + + + A
Sbjct: 428 KIDVITFASSKTVQNFSRLTQFLGKDLWEGVCIASIGPQTSETCQQLLGRLDIEAKEYTL 487
Query: 222 TSLLKLL 228
L +++
Sbjct: 488 EGLTEVI 494
>gi|59710672|ref|YP_203448.1| uroporphyrinogen III synthase [Vibrio fischeri ES114]
gi|59478773|gb|AAW84560.1| uroporphyrinogen III synthase [Vibrio fischeri ES114]
Length = 253
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 67/240 (27%), Gaps = 15/240 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP +++ + + + G+ + PL E L I S
Sbjct: 1 MTILVTRPEQESQALCDALNQSGHPAISHPLITIHPGNELSQLPRLFYSLNDGDFIIAVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASAC-----LARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ + + G K + + ++ +
Sbjct: 61 QHAVEHTQNYLKQLQLEWKQGVNYIAVGQKSAQHLKKYISDPVHYPTHSDSEHLLALPVL 120
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADA 169
K I L G L + + + + Y Q IA+ + Q N +
Sbjct: 121 QNATGKKAIILRGNGGRDLIYQVLNDLNVDVTYCEAYQRQAIAFDASIKTREWQEKNVNT 180
Query: 170 ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ + + +F S L + L S I + + LL
Sbjct: 181 LIVTSGEQLSFFTSQFTSTDLNWVLKLRLLVPSERINQFAKELGYQHIETVGGASNSDLL 240
>gi|197334036|ref|YP_002154834.1| uroporphyrinogen-III synthase [Vibrio fischeri MJ11]
gi|197315526|gb|ACH64973.1| uroporphyrinogen-III synthase [Vibrio fischeri MJ11]
Length = 253
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 67/240 (27%), Gaps = 15/240 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M I++TRP +++ + + + G+ + PL E L I S
Sbjct: 1 MTILVTRPEQESQALCDALNQSGHPAISHPLITIHPGNELSQLPRLFSSLNDGDFIIAVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASAC-----LARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ + + G K + + ++ +
Sbjct: 61 QHAVEYTQKYLKQLQLEWKQGVNYIAVGQKSAQHLKKYISDPVHYPTHSDSEHLLALPVL 120
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADA 169
K I L G L + + + + Y Q IA+ + Q N +
Sbjct: 121 QNATGKKAIILRGNGGRDLIYQVLNDLNVDVTYCEAYQRQAIAFDASIKTREWQEKNVNT 180
Query: 170 ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ + + +F S L + L S I + + LL
Sbjct: 181 LIVTSGEQLSFFTSQFISTDLNWVLKLRLLVPSERINQFAKELGYQHIETVGGASNSDLL 240
>gi|95931271|ref|ZP_01313989.1| Uroporphyrinogen III synthase HEM4 [Desulfuromonas acetoxidans DSM
684]
gi|95132665|gb|EAT14346.1| Uroporphyrinogen III synthase HEM4 [Desulfuromonas acetoxidans DSM
684]
Length = 264
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/246 (12%), Positives = 69/246 (28%), Gaps = 21/246 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR +A ++ G + PL + LA Q Y + +TS
Sbjct: 10 RILVTRAAHQAQSFVRLLEAQGATAITCPLIEIVAPASWQRLDEALARLQDYDDLILTSV 69
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ + + + + +G +A + G+ + ++
Sbjct: 70 NAVDMVFSRLGKGVVPQTALDGVRLVCVGPKTAKSLQHYGYQPDLQP--DEYRAEAVVAA 127
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
+ ++Y + L + + Y + ++ LL +
Sbjct: 128 LTAEGVRGRKVLYPRAELARDLIPSSLTQAGAEVDDPIAYRTLPAKGSALQIRGLLDDKA 187
Query: 168 -DAILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D + F + SSV F L + + +
Sbjct: 188 VDVVTFSSSSSVDNFVDLLGDDVTLLTRHVVLASIGPLTTATAVKHGLAIEVEPAEYTLD 247
Query: 223 SLLKLL 228
L++ L
Sbjct: 248 GLVQAL 253
>gi|325690355|gb|EGD32359.1| uroporphyrinogen-III synthase domain protein [Streptococcus
sanguinis SK115]
Length = 241
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 64/226 (28%), Gaps = 4/226 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
I+ TR EKI++ G+ +PL A TS+ ++
Sbjct: 4 KIIFTREQAPDSAWLEKIRQTGFETHHVPLIRCQSLPLPEDVQAALPEADWAFFTSAVAV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
I IG ++ + G F I E L P + ++
Sbjct: 64 EAFSPYLKEDYQIATIGPQTSQALDKLGRDCDFQASS--HYGLDFIQEWLDLALPTQKIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVL 179
N + L E + Y + + ++ L Q F + S+
Sbjct: 122 LPQSSLSNPSLAEKLKEAGHEVWAWPMYETTSNPAGQDQLQTYLSQEDVIWTFASPSAWQ 181
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F ++ S + A A+ S V P ++
Sbjct: 182 SFCAIKPYLASSHQIAVIGQTTAQAVKESGYGVDYQPQSPSVEEMV 227
>gi|240137306|ref|YP_002961775.1| putative uroporphyrinogen III synthase [Methylobacterium extorquens
AM1]
gi|240007272|gb|ACS38498.1| putative uroporphyrinogen III synthase [Methylobacterium extorquens
AM1]
Length = 236
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 91/239 (38%), Gaps = 16/239 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I ++RP A RT ++ ++G+ ++ P+ + + +TS+ +
Sbjct: 1 MRIWVSRPEPGASRTARRLAELGHAALVAPVLRIAPSDGP---PPTGRFDGLILTSANAA 57
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ L A P+FA+G +A A + G + ++++LA+++ P L+
Sbjct: 58 APLAAAGLPEAPVFAVGTRTAERANRAGLRSVHCADGDAVSLARLVAAHV---RPGGTLL 114
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-----AILFYAR 175
+ G+ R L + Y + + L D A L ++R
Sbjct: 115 HAAGEDRKAEPAASLTAAGYRVTTWTAYAALAETTLPAPVVQGLLGRDDAPLAAALHFSR 174
Query: 176 SSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S L A +S AF CLS ++A + VA P E +LL L
Sbjct: 175 RSAEIAVHLSGKAGLSGAFRALAHYCLSPDVALGLVELGVAAHFVAARPSEEALLAGLA 233
>gi|21592861|gb|AAM64811.1| uroporphyrinogen III synthase [Arabidopsis thaliana]
Length = 321
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 77/242 (31%), Gaps = 16/242 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA---MQQSYGAIAITSSES 59
+V+TR K + + ++K G + +PL + LA +S+ I ITS E+
Sbjct: 67 VVVTRERGKNNQIIKALEKNGISSLELPLIQHARGPDFDRLASVLNDKSFDWIIITSPEA 126
Query: 60 ----LSTLPANFCRHTPIFAIGEASA----CLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
L I +G +A + + + E
Sbjct: 127 GSVFLEAWKTASSPEVQIGVVGAGTARVFEEAMKSADGLLHVAFTPSKATGKVLASELPE 186
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ ++Y + L + + ++ Y + + +T + +A +
Sbjct: 187 KVGKRSSVLYPASLKAGNDIVEGLSKRGFEVIRLNTYTTVPVQSVDTVLLQQALSAPVLS 246
Query: 172 FYARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S+V + L + + C+ ASA V P S+++
Sbjct: 247 VASPSAVRAWLHLIQNEEQWSNYVACIGETTASAARRLGLKNVYYPEKPGLEGWVESIME 306
Query: 227 LL 228
L
Sbjct: 307 AL 308
>gi|256371069|ref|YP_003108893.1| uroporphyrin-III C-methyltransferase [Acidimicrobium ferrooxidans
DSM 10331]
gi|256007653|gb|ACU53220.1| uroporphyrin-III C-methyltransferase [Acidimicrobium ferrooxidans
DSM 10331]
Length = 490
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/241 (16%), Positives = 80/241 (33%), Gaps = 18/241 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-----QQSYGAIAITS 56
IV+TRP A +++ +G + V P + + Y + +TS
Sbjct: 246 RIVVTRPRAVADALAVRLRDLGAVVVASPAIEIGPPSDGGAALAAALSHIEDYDWLVLTS 305
Query: 57 SESLSTLPANFCRHT-----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ + I AIG A+A + T + + +VE
Sbjct: 306 QNAVDRVVGGIGDLRRLGGVRIAAIGPATARALERVHLTADLIPGT---WVGEGLVEVFG 362
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++ + L + V++ Y ++ A L+++AD ++
Sbjct: 363 --PGPGSVLIARARQARDVVPRGLEAKGWRVDVVEAYETRTAAASVPP--ELVESADLVV 418
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
F A S+V F + P + A + A+ V A L++++
Sbjct: 419 FTAPSTVEGFATQY-PGLVPRAAAAIGPVTEEALVRRGWPVALTATHYDADGLVEVIREA 477
Query: 232 R 232
R
Sbjct: 478 R 478
>gi|21674249|ref|NP_662314.1| uroporphyrinogen-III synthase [Chlorobium tepidum TLS]
gi|25453020|sp|Q8KCJ3|HEM4_CHLTE RecName: Full=Uroporphyrinogen-III synthase; Short=UROS; AltName:
Full=Hydroxymethylbilane hydrolyase [cyclizing];
AltName: Full=Uroporphyrinogen-III cosynthase
gi|21647417|gb|AAM72656.1| uroporphyrinogen-III synthase [Chlorobium tepidum TLS]
Length = 246
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/243 (12%), Positives = 66/243 (27%), Gaps = 15/243 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP +A ++ + G V+ P + I TS S
Sbjct: 1 MKTVLVTRPKHQAEPFVRELAQYGLDSVVFPTIEIRPVTGWSV-PDLTRFAGIFFTSPNS 59
Query: 60 LSTLPANFCRHTPIFAIGEASACLA--------RQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ +P A + + S + ++
Sbjct: 60 VQFFLERLLEESPDELPNLQQARVWAVGKTTGGDLEKHGVSIEPLPKSADAVSLMSGIDA 119
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNAD 168
K +++ G + + + + Y + + ET L D
Sbjct: 120 SEIEGKTFLFVRGSLSLGTIPEVIAKRGGICVELTVYDNIQPSLEETQKIKSLLTEGKID 179
Query: 169 AILFYARSSVLYFFSLP--LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F + S+ + FF + +SA+ V + + + K
Sbjct: 180 CLSFTSPSTAINFFEAIDSKEVPSDVLIAAIGTTTSSALEKLGVKVDIIPEYFDGPNFAK 239
Query: 227 LLP 229
+
Sbjct: 240 AIA 242
>gi|315125212|ref|YP_004067215.1| uroporphyrinogen-III synthase [Pseudoalteromonas sp. SM9913]
gi|315013725|gb|ADT67063.1| uroporphyrinogen-III synthase [Pseudoalteromonas sp. SM9913]
Length = 613
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 74/237 (31%), Gaps = 10/237 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD-RESVFLAMQQSYGAIAITSSESL 60
+I+ITRP K +++++ GY + P+ + SV L+ + I S +++
Sbjct: 3 HILITRPEGKGAALAQQLEQAGYQASLCPVLKITYLTPTSVELSPLVNADKIIFVSQDAV 62
Query: 61 STLPANFCRHT-PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
L A G + + ++ + + +
Sbjct: 63 HALSALKPAINTKAQFYGVGQQTADTIYEVFGVRAALPKQHDSEGLLALKSLAEVDGSNI 122
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LFYARSS 177
+ + G L + L Y + +A + Q+ + + + ++
Sbjct: 123 VLVKGIGGRPEIAKTLKQRGAFLNNCVVYQREPVAQQSADWIDHWQSQNVHGIVITSNAA 182
Query: 178 VLYFFSLPLPAKISAA----FLCLSNNIASAIPASYK--NVVTVACFPKETSLLKLL 228
V F+ A+++ F S I + + A + ++ +
Sbjct: 183 VDAIFNTLTAAQLTWLQQCEFYVASERIGDYLQQQKINSTHIHTAAGASDHAMFACI 239
>gi|254515498|ref|ZP_05127558.1| uroporphyrinogen-III synthase [gamma proteobacterium NOR5-3]
gi|219675220|gb|EED31586.1| uroporphyrinogen-III synthase [gamma proteobacterium NOR5-3]
Length = 261
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 67/233 (28%), Gaps = 16/233 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES-----VFLAMQQSYGAIAITS 56
+++TRP +A ++ G+ P+ MP+ + Y + S
Sbjct: 6 RVLVTRPAGQADSLMCSLRNAGFTPLHMPMLTIEAIDPLPGVQRQRVLDLDRYEHVIFVS 65
Query: 57 SESLSTLPANFCRHTPIFAIGEASAC-----LARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + A + P G+ + + ++ ++ +
Sbjct: 66 ANAARLGMACLGDYWPQLPQGQIYWAVGESTALCLEAEGLQVTRPASDMSSEGLLAMPGL 125
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--A 169
+ ++ + G+ E L E + ++CY + ++++ +
Sbjct: 126 ADLRSQQVLIVKGEGGRKFLEQQLRERGAKVDSLECYRRSFAEHDAKACRDVIAMPELAL 185
Query: 170 ILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACF 218
IL + + L P L S +A V A
Sbjct: 186 ILISSGEGLERLSGLLQPREHTNLARTTLLVPSPRVAQQASQLGWERVEQAEN 238
>gi|160877199|ref|YP_001556515.1| uroporphyrinogen III synthase HEM4 [Shewanella baltica OS195]
gi|160862721|gb|ABX51255.1| Uroporphyrinogen III synthase HEM4 [Shewanella baltica OS195]
gi|315269403|gb|ADT96256.1| Uroporphyrinogen III synthase HEM4 [Shewanella baltica OS678]
Length = 246
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 30/246 (12%), Positives = 61/246 (24%), Gaps = 16/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSE 58
M +++TRP + + + + G + PL I S+
Sbjct: 1 MKVLLTRPEGRNQSMVDALNERGIAHWVTPLLCVEATPAIATNTPHPLAHADMIICISAN 60
Query: 59 SLSTLPANFCRHTPIFAIGE--ASACLARQKGFTQIF------HGKDNSINLAKIIVEQK 110
+++ P + D+ ++
Sbjct: 61 AVTFADNALTAANPHTKAWPPAQYFAVGHATWDALDQLGISALEAPDDCQQTEGLLTLAP 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + + G + L LR + Y + Q
Sbjct: 121 LQEIKGKQITIIRGVGGREALAEQLAARGAHLRYWEVYQRACPPLDGQQLALQWQAFGID 180
Query: 170 -ILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + +L S + SN + + A VT A ++
Sbjct: 181 TIVVTSGEVLDNLINLVPKELFAWLRSCHIIVPSNRVEAQAHAFGITQVTNANAANSKAV 240
Query: 225 LKLLPL 230
L L L
Sbjct: 241 LNALKL 246
>gi|297620184|ref|YP_003708289.1| Uroporphyrinogen III synthase HEM4 [Methanococcus voltae A3]
gi|297379161|gb|ADI37316.1| Uroporphyrinogen III synthase HEM4 [Methanococcus voltae A3]
Length = 242
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 76/249 (30%), Gaps = 25/249 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ITRP +KA + + + G+ P+++P + V L +Y I TS +
Sbjct: 1 MKVLITRPKQKAKNFSDMLIENGFEPLILPTLELSFKKVDVSL---DNYDWIVFTSPRGI 57
Query: 61 STLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
L N + +K F NS ++ K +
Sbjct: 58 EGLFKNLTEIQKSQIKDKKIGVIGIETAKEFKKIFNFDPDLVPNSYTAENLLEALKKVVK 117
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-------NA 167
P + ++ + ++ Y S++ + NL + +
Sbjct: 118 PGEKILIPTTPATRDVLV-----KNLNADLLFVYSSEEPKDISENLDNLKELLKNTGSDN 172
Query: 168 DAILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F + + FF ++ + + + + +
Sbjct: 173 LILTFTSGLTAKNFFKHVDDELMNLFKKCKVVSIGPITKENVDKFGFDSLMPEKTYTIDG 232
Query: 224 LLKLLPLRR 232
+++L+ +
Sbjct: 233 MMELIKNLK 241
>gi|224826002|ref|ZP_03699105.1| Uroporphyrinogen III synthase HEM4 [Lutiella nitroferrum 2002]
gi|224601639|gb|EEG07819.1| Uroporphyrinogen III synthase HEM4 [Lutiella nitroferrum 2002]
Length = 245
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 78/236 (33%), Gaps = 12/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM--QQSYGAIAITSSES 59
I++TRP ++ R + G P+ +P+ + D ++ ++ + S +
Sbjct: 7 RILVTRPPAQSARLMALLSDAGAEPLPLPVLDIVPDERALAALPTLAEAADWLIFVSPSA 66
Query: 60 LSTLPANFCRHTP--IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ R A A++ + + + A ++ ++ +
Sbjct: 67 IDAAWPVLARRKLKARLACVGAASAAKLAALSGRAVLHPRDGSDSAALLALPELQRLTGQ 126
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + G + L L + + Y D + ++ DA++ + +
Sbjct: 127 RVLIVRGVGGRAELGETLAARGARLTLAEVYRRVDGEPDWSLLEQ---PVDALVLTSSDT 183
Query: 178 VLYFFSLPLPAK---ISAAFLC-LSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F L ++ + C IA+ + A + V + +L+ L
Sbjct: 184 AERLFRLAGRSRSLTLQCLLYCVPHPRIAATLAAHGVTRI-VTTQADDAALVAGLS 238
>gi|296108813|ref|YP_003615762.1| Uroporphyrinogen III synthase HEM4 [Methanocaldococcus infernus ME]
gi|295433627|gb|ADG12798.1| Uroporphyrinogen III synthase HEM4 [Methanocaldococcus infernus ME]
Length = 230
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 71/243 (29%), Gaps = 24/243 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A + + K GY + +P + + + +Y IA TS +
Sbjct: 1 MNVIVTRPEDVAKSFCQLLTKKGYSVIKIPCLEIRYKKVKI---NLDNYDIIAFTSPRGV 57
Query: 61 STLPANFCRH------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
L N I A ++ F + + K++ E K +
Sbjct: 58 KGLYLNLSEDEREKVKEKIIACIGEKTAKKVEELFKKSPEIVPSEYRAEKLLEEIKKVE- 116
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-NADAILFY 173
++ + + I Y S + + + +L + I F
Sbjct: 117 --GKILIPTTRATRDVL------RVLHPTYIYVYESLEPENLKEKVLSLKNLDTFIITFT 168
Query: 174 ARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ F + + A + N + VA +L+ +
Sbjct: 169 SGLIAENFLKYVDEELKKKIEENYIIAIGPVTAERVKRFGLNPI-VAKKYTIEGILEAIE 227
Query: 230 LRR 232
+
Sbjct: 228 RVK 230
>gi|193215990|ref|YP_001997189.1| uroporphyrinogen III synthase HEM4 [Chloroherpeton thalassium ATCC
35110]
gi|193089467|gb|ACF14742.1| Uroporphyrinogen III synthase HEM4 [Chloroherpeton thalassium ATCC
35110]
Length = 248
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 71/247 (28%), Gaps = 21/247 (8%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP +A + K + P L Y I TS S
Sbjct: 1 MKTVLVTRPKDQAGSLIAALSKFNLGCELFPTIEIAAVPGWS-LPGLSGYAGIFFTSVNS 59
Query: 60 LSTLPANFCRHTP----------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ L + P +FA+G +A + + ++
Sbjct: 60 VNYLCTPLQKDFPEFAREINKLKVFAVGVKTAKALAKFNISTEELPSQAYAT--DLMAMI 117
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ---- 165
K +++ G + +H I Y ++ P + +
Sbjct: 118 KPEEIQNNKFLFIRGTLSLGIIPAEISKHGGLCDEITVYENKIATPPPDELVRIKSLLEQ 177
Query: 166 -NADAILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D I+F + S+ + FF L + + + A+ + +
Sbjct: 178 GKIDCIVFTSPSTAINFFQLLNIQSLPEKTKVASIGTTTSGALTDMNIATDIMPDYSTSE 237
Query: 223 SLLKLLP 229
L + +
Sbjct: 238 GLAEAIA 244
>gi|153002482|ref|YP_001368163.1| uroporphyrinogen III synthase HEM4 [Shewanella baltica OS185]
gi|151367100|gb|ABS10100.1| Uroporphyrinogen III synthase HEM4 [Shewanella baltica OS185]
Length = 246
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 30/246 (12%), Positives = 61/246 (24%), Gaps = 16/246 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSE 58
M +++TRP + + + + G + PL I S+
Sbjct: 1 MKVLLTRPEGRNQSMVDALNERGIAHWVTPLLCVEATPAIATNTPHPLAHADMIICISAN 60
Query: 59 SLSTLPANFCRHTPIFAIGE--ASACLARQKGFTQIF------HGKDNSINLAKIIVEQK 110
+++ P + D+ ++
Sbjct: 61 AVTFADNALTTTNPPHKAWPPAQYFAVGHATWDALDQLGISALEAPDDCQQTEGLLTLAP 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ K + + G + L LR + Y + Q
Sbjct: 121 LQEIKGKQITIIRGVGGREALAEQLAARGAHLRYWEVYQRACPPLDGQQLALQWQAFGID 180
Query: 170 -ILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + + +L S + SN + + A VT A ++
Sbjct: 181 TIVVTSGEVLDNLINLVPKELFAWLRSCHIIVPSNRVEAQAHAFGMTQVTNANAANSKAV 240
Query: 225 LKLLPL 230
L L L
Sbjct: 241 LNALKL 246
>gi|297627153|ref|YP_003688916.1| Uroporphyrinogen-III synthase HemD [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
gi|296922918|emb|CBL57500.1| Uroporphyrinogen-III synthase HemD [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 538
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/252 (12%), Positives = 73/252 (28%), Gaps = 22/252 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ + E++ G +P R + L Y + TS
Sbjct: 262 VLVPLTRDRNEELIERLSLHGAHCTEVPTIDVEPPRNAAQLDRAIRGLVDGHYQWVIFTS 321
Query: 57 SESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGK--DNSINLAKI 105
++ + A + I A+G+ + G LA
Sbjct: 322 VNAVRAVAAKVAEYGLDARSLSGLQIAAVGDGTREYLSTWGLIPDLAPTDVHTVAGLAAE 381
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ P ++ + + L E + + Y + + P ++ ++
Sbjct: 382 FPAYDDIVDPMNSVLVPRAEIATEPLSEGLAELGWEVDDVTAYRTVRASPPPAPIREAIK 441
Query: 166 --NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ DA++F + ++V + + + A +V ++ P +
Sbjct: 442 SGDFDAVVFTSSTTVRNLIGIAGKPHAATMVAAIGPATAVTCEEHGLDVAVISDAPGQIE 501
Query: 224 LLKLL---PLRR 232
L L RR
Sbjct: 502 LADSLAYGARRR 513
>gi|282849933|ref|ZP_06259316.1| uroporphyrinogen-III C-methyltransferase [Veillonella parvula ATCC
17745]
gi|282580370|gb|EFB85770.1| uroporphyrinogen-III C-methyltransferase [Veillonella parvula ATCC
17745]
Length = 502
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 74/247 (29%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSE 58
+V+TR +A +EK+ G V + + + Y I TS E
Sbjct: 256 VVVTRARSQASAFREKLAAQGANVVEAAAIKTSPLELFEEDKRIINNTKEYQCIVFTSGE 315
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + ++ + AIG A+A + G D A +E+
Sbjct: 316 GVRYFFDALYKEGKDTRALGNSKVAAIGCATARELHKYGIVPDIIPVDYKAESAVEALEE 375
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ ++ + K L + + ++ Y + + + L
Sbjct: 376 ELNAGD--SVLLIQPKVARDVIPRCLRHRDMDVDILRLYETTQDTSQQEALVTALTEGTV 433
Query: 170 --ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V L + C+ A+ ++ ++
Sbjct: 434 DYITFTSSSTVTNTIQLLGDDALALLGKTKIACIGPITAATAMSAGLKPAIISDVYTTDG 493
Query: 224 LLKLLPL 230
L+ +
Sbjct: 494 LVNAIVK 500
>gi|114321816|ref|YP_743499.1| uroporphyrinogen-III synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228210|gb|ABI58009.1| uroporphyrinogen-III synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 261
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/243 (13%), Positives = 75/243 (30%), Gaps = 19/243 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+++TRP +A ++ G +P + ES +A + S
Sbjct: 9 VLVTRPAHQAAGLCRTLEAAGARVWALPTLEIVPQPESALPAAAVAALGEADWLIFVSPN 68
Query: 59 SLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ A RH I A+G+ + + G + + + E
Sbjct: 69 AVHHGLACMARHGVRPRPDARIAAVGKGTERALHRVGLSVTAVPQAGF-TSEDLAREPAF 127
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADA 169
+ ++ + G ++L + + Y + + LQ +
Sbjct: 128 GDMRGQRVMIVRGDSGRAWLAEHLRGQGAEVAFLAVYRAVRPQVDAQPVVEALQAGRLHS 187
Query: 170 ILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKN-VVTVACFPKETSL 224
++ + + + + + A + +S IA + V VA P + L
Sbjct: 188 VIITSVRGLDNLWFMLGDSGRVLVQRRALVTVSPRIARYAEQAGHTGPVVVARSPADEDL 247
Query: 225 LKL 227
L+
Sbjct: 248 LQA 250
>gi|254415297|ref|ZP_05029058.1| uroporphyrin-III C-methyltransferase domain protein [Microcoleus
chthonoplastes PCC 7420]
gi|196177772|gb|EDX72775.1| uroporphyrin-III C-methyltransferase domain protein [Microcoleus
chthonoplastes PCC 7420]
Length = 537
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 71/249 (28%), Gaps = 26/249 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I++TR +++ ++ ++K G + MP L + + +TSS
Sbjct: 285 ILVTRSAQQSSTFRDLLEKEGATVIEMPALVITPPSSWDALDQAITNLSDFDWLILTSSN 344
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I +G+ +A +++G F +A +VE
Sbjct: 345 GVKYFFERLLTLGKDSRALSGVKIAVVGKKTAASLKERGLHPDFIPP---DFVADSLVEH 401
Query: 110 KVLFTPQKPLIYLGGKP-RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
++ +++ + L + + Y S LQN
Sbjct: 402 FPEPLAEQTILFPRVETGGREVLVKDLTAQGATIVEVAAYQSTCPGEIAPPAAAALQNHT 461
Query: 168 -DAILFYARSSVLYFFSLPLPA-------KISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+ I F + +V F L + + + V A
Sbjct: 462 VNIITFASSKTVKNFRKLLDKNSNHPLSLLENVCIASIGPETSKTCQQLLGRVDVEAQQY 521
Query: 220 KETSLLKLL 228
L + +
Sbjct: 522 TLEGLTQAI 530
>gi|297825849|ref|XP_002880807.1| hypothetical protein ARALYDRAFT_481514 [Arabidopsis lyrata subsp.
lyrata]
gi|297326646|gb|EFH57066.1| hypothetical protein ARALYDRAFT_481514 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 16/242 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITSSES 59
+V+TR + K + + ++K G + +PL + LA +S+ I ITS E+
Sbjct: 51 VVVTRELGKNNQIIKALEKHGISSLELPLIQHARGPDFDRLASVLSDKSFDWIIITSPEA 110
Query: 60 ----LSTLPANFCRHTPIFAIGEASA----CLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
L I +G +A + + + E
Sbjct: 111 GSVFLEAWKTASSPKVQIGVVGAGTARVFEEAMQSAEGLLHVAFTPSKATGKVLASELPE 170
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ ++Y + L + + ++ Y + + +T + +A +
Sbjct: 171 KVGKRSSVLYPASLKAGNVIVEGLSKRGFEVVRLNTYTTVPVQSVDTVLLQQAVSAPVLS 230
Query: 172 FYARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S+V + +L + + C+ ASA V P S+++
Sbjct: 231 VGSPSAVRAWLNLIQNEEQWSNYVACIGETTASAAKRLGLKNVYYPEQPGLEGWVESIME 290
Query: 227 LL 228
L
Sbjct: 291 AL 292
>gi|283798143|ref|ZP_06347296.1| siroheme synthase [Clostridium sp. M62/1]
gi|291074123|gb|EFE11487.1| siroheme synthase [Clostridium sp. M62/1]
Length = 542
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 82/265 (30%), Gaps = 39/265 (14%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
I++TRP +++ ++++ G V +P + ++ FL + TS
Sbjct: 271 KILVTRPKRRSAGMAGRLREAGAEVVELPAAEPRLLEDTSFLDRTLERLADFKWAVFTSP 330
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN-----LA 103
+ R IG +A + GF + ++ LA
Sbjct: 331 SGVELFFEYLRREKKDIRLLMGLKFAVIGAGTAKALCRYGFYADYMPENFYAKELGRGLA 390
Query: 104 KIIVEQKVLFTPQK-------------PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
+ I+ + + ++ L + + + L +IP Y +
Sbjct: 391 ETILHEMKEEEKRGENGRGGAGCGKPVKVLLLRAQKASPALCEELARAEIPFEDAVLYRT 450
Query: 151 QDIAYPET----TMKNLLQNADAILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIAS 203
+ A + + D + F + S+V F L P +C+
Sbjct: 451 EFPAPSMQAERVKILLEKKAFDYVTFTSESTVKGFLELLSPTDEELCGFTAVCIGEMTEK 510
Query: 204 AIPASYKNVVTVACFPKETSLLKLL 228
A + V + P S+ + +
Sbjct: 511 AAREAGMRTV-TSEVPSMDSMAECM 534
>gi|301029019|ref|ZP_07192173.1| uroporphyrinogen-III synthase [Escherichia coli MS 196-1]
gi|299878013|gb|EFI86224.1| uroporphyrinogen-III synthase [Escherichia coli MS 196-1]
gi|315618499|gb|EFU99085.1| uroporphyrinogen-III synthase [Escherichia coli 3431]
Length = 231
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 67/231 (29%), Gaps = 17/231 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
+++ +G + PL F + + LA + S +++ + +
Sbjct: 1 MSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQD 60
Query: 72 PIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ + LA Q + ++ ++ K + L G
Sbjct: 61 RKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGN 120
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFS 183
D L + +CY I Y E M+ + ++ + + +S
Sbjct: 121 GGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTSGEMLQQLWS 180
Query: 184 LPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L + L +S +A + VA +LL+ L
Sbjct: 181 LIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ 231
>gi|332345782|gb|AEE59116.1| uroporphyrinogen-III synthase [Escherichia coli UMNK88]
Length = 231
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 67/231 (29%), Gaps = 17/231 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
+++ +G + PL F + + LA + S +++ + +
Sbjct: 1 MSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQD 60
Query: 72 PIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ + LA Q + ++ ++ K + L G
Sbjct: 61 RKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGN 120
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFS 183
D L + +CY I Y E M+ + ++ + + +S
Sbjct: 121 GGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVTTVVVTSGEMLQQLWS 180
Query: 184 LPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L + L +S +A + VA +LL+ L
Sbjct: 181 LIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ 231
>gi|295091712|emb|CBK77819.1| uroporphyrinogen-III synthase /uroporphyrinogen-III
C-methyltransferase [Clostridium cf. saccharolyticum
K10]
Length = 542
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 82/265 (30%), Gaps = 39/265 (14%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
I++TRP +++ ++++ G V +P + ++ FL + TS
Sbjct: 271 KILVTRPKRRSAGMAGRLREAGAEVVELPAAEPRLLEDTSFLDRTLERLADFRWAVFTSP 330
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN-----LA 103
+ R IG +A + GF + ++ LA
Sbjct: 331 SGVELFFEYLRREKKDIRLLMGLKFAVIGAGTAKALCRYGFYADYMPENFYAKELGRGLA 390
Query: 104 KIIVEQKVLFTPQK-------------PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
+ I+ + + ++ L + + + L +IP Y +
Sbjct: 391 ETILHEMKEEEKRGENGRGGAGCGKPVKVLLLRAQKASPALCEELARAEIPFEDAVLYRT 450
Query: 151 QDIAYPET----TMKNLLQNADAILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIAS 203
+ A + + D + F + S+V F L P +C+
Sbjct: 451 EFPAPSMQAERVKILLEKKAFDYVTFTSESTVKGFLELLSPTDEELCGFTAVCIGEMTEK 510
Query: 204 AIPASYKNVVTVACFPKETSLLKLL 228
A + V + P S+ + +
Sbjct: 511 AAREAGMRTV-TSEVPSMDSMAECM 534
>gi|229019688|ref|ZP_04176495.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH1273]
gi|229025927|ref|ZP_04182319.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH1272]
gi|228735373|gb|EEL85976.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH1272]
gi|228741595|gb|EEL91788.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH1273]
Length = 250
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 74/238 (31%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA---MQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKERSGIPLEIPLLRMEGMSHRQIQHITGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + + P A + + +A++ E+ + +
Sbjct: 69 VAFFLDSLRKKLPGTIKIAAVGVKTKLELEKRGYQVDFVPTAFVAEVFAEEFVKKLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 CILFPKGNLARDVIPVTLRERGVSLEELIVYGTKVNVEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ + Y + V V +LL+ +
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFSHVIVPKEYTVEALLQCI 245
>gi|282895694|ref|ZP_06303819.1| hypothetical protein CRD_00318 [Raphidiopsis brookii D9]
gi|281199388|gb|EFA74253.1| hypothetical protein CRD_00318 [Raphidiopsis brookii D9]
Length = 274
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 67/252 (26%), Gaps = 26/252 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
I++TR + ++ I +G + +P L ++ + TS+
Sbjct: 15 ILVTRAVGQSSELSHGITNLGARVIELPALEIGPPSSWRSLDQSILELSTFDWLVFTSTN 74
Query: 59 SLSTLPANFCRHTPIFA-----------IGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + A I A+ QI +A +V
Sbjct: 75 GVESFFARMALQYKNQQALIRRAINRTKIAAVGEKTAQSLKMHQIEPDFIPPDFIADSLV 134
Query: 108 EQKVLFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
K +++ L + + + Y S TT + L N
Sbjct: 135 NNFPENLAGKKILFPRVESGGRDILVKELTQKGAQVVEVPAYESLCPQSIPTTAQQALIN 194
Query: 167 A--DAILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
D I F + +V +F L +A + + V A
Sbjct: 195 HSVDVITFASSKTVKFFCVLLENNLPQKAEQYLNKSAIASIGPQTSKTCIDLLGRVDITA 254
Query: 217 CFPKETSLLKLL 228
L+K +
Sbjct: 255 QKHTIDGLIKAI 266
>gi|15606833|ref|NP_214213.1| uroporphyrinogen-III synthase [Aquifex aeolicus VF5]
gi|2984071|gb|AAC07611.1| putative protein [Aquifex aeolicus VF5]
Length = 250
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 87/235 (37%), Gaps = 14/235 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TR ++ + + ++ G+ + +PL + + + I S +++
Sbjct: 15 RVILTRELEDIKKDKPLFEREGFKVLELPLIQTKVLEFN---LPDEEFDYIVFQSKKAVK 71
Query: 62 TL--PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
N + I A+G+ +A + G+ F ++ S + ++ P+ +
Sbjct: 72 IFLGKVNLKGNKKIVAVGKKTAEELEKLGYKADFIPENESAKGLIELFKR----LPKGKV 127
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ K +L E + +D Y ++ + Y + L D I+FY+ S+V
Sbjct: 128 LIPRSKIGRTELIKFLKETSFEVFALDVYTTEYVFYTREELLEKLNKGDFIIFYSPSAVK 187
Query: 180 YFFSL-----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
FF+ +S F+ + + V + P ++K L
Sbjct: 188 AFFANLQMHKIPKDSLSLKFVAIGKTTKEELQKHSVKNVITSERPSTEDIVKKLK 242
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 11/127 (8%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ K++ K +I + + + ++ + +
Sbjct: 1 MWMYIHKIMKLSYKRVILTRELEDIKKDKPLFEREGFKVLELPLIQTKVLEFN-----LP 55
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ D I+F ++ +V F + + + A + +
Sbjct: 56 DEEFDYIVFQSKKAVKIFLGKVNLKG-NKKIVAVGKKTAEELEKLGYKADFIPENESAKG 114
Query: 224 LLKLLPL 230
L++L
Sbjct: 115 LIELFKR 121
>gi|119469645|ref|ZP_01612514.1| uroporphyrinogen-III synthase HemD (N terminal)/Uroporphyrin-III
C-methyltransferase (C terminal) [Alteromonadales
bacterium TW-7]
gi|119446892|gb|EAW28163.1| uroporphyrinogen-III synthase HemD (N terminal)/Uroporphyrin-III
C-methyltransferase (C terminal) [Alteromonadales
bacterium TW-7]
Length = 610
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 74/237 (31%), Gaps = 10/237 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD-RESVFLAMQQSYGAIAITSSESL 60
+I+ITRP K E++++ GY + P+ + S L+ + I S +++
Sbjct: 3 HILITRPEGKGAALAEQLEQAGYQASLFPVLNINYLTPSSTQLSPLINADKIIFISQDAV 62
Query: 61 STLPANFCR-HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
L + + + ++ + + +
Sbjct: 63 KALAQLKPDINIKAQFYAVGQQTADTIYELFGVRAATPKQFDSEGVLALKSLAQVDDSNI 122
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSS 177
+ + G+ L E L Y + + + + + N I+ + ++
Sbjct: 123 VLVKGQGGRPDIAKVLKERGAFLNNCVVYEREPVPDLTSNWTDHWKSSNVHGIVITSNAA 182
Query: 178 VLYFF----SLPLPAKISAAFLCLSNNIASAIPASY--KNVVTVACFPKETSLLKLL 228
V F + L F S IA+ + + + +A + ++ +
Sbjct: 183 VDAMFTPLAAQQLQWLQQCHFYVASERIAAYLQQQHVSLANIHIAAGASDNAMFTCI 239
>gi|90421575|ref|YP_529945.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
BisB18]
gi|90103589|gb|ABD85626.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
BisB18]
Length = 248
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 84/243 (34%), Gaps = 15/243 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP T ++ GY ++ P+ F V + YGA+ +TS+ +L
Sbjct: 1 MALLVTRPQPDNETTAVALRTKGYEVLLAPMLRFEAVA--VKDDPEARYGAVIVTSANAL 58
Query: 61 STLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKII--VEQKVLFT 114
+ P+FA+G +A AR GF + ++ L I +
Sbjct: 59 RAVAGQTGIARLLDLPLFAVGARTAQSARDAGFRNVIVADGDASALRDKIVAAARAKQLQ 118
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
L+YL G L + Y + + + +L
Sbjct: 119 KADTLLYLSGAEVARDLAGELRALGFNIATQTAYKMIPVRDLPDEVCDAFAANRIEAVLH 178
Query: 173 YARSSVLYFFSLPLPAKISAAFL-----CLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
Y+ S F A I + L CLS +A + + V A P E +L +
Sbjct: 179 YSGRSARSFLEAARSAGIEISALAVPQCCLSAAVAGVVREAGATRVMEARRPDEAALFDV 238
Query: 228 LPL 230
L
Sbjct: 239 LDR 241
>gi|309784520|ref|ZP_07679158.1| uroporphyrinogen-III synthase [Shigella dysenteriae 1617]
gi|308927626|gb|EFP73095.1| uroporphyrinogen-III synthase [Shigella dysenteriae 1617]
Length = 231
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 68/231 (29%), Gaps = 17/231 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
+++ +G + PL F R+ + LA + S +++ + +
Sbjct: 1 MSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQD 60
Query: 72 PIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ + LA Q + ++ ++ K + L G
Sbjct: 61 RKWPRLPTYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGN 120
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFS 183
D L + +CY I Y E M+ + ++ + + +S
Sbjct: 121 GGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVTTVVVTSGEMLQQLWS 180
Query: 184 LPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L + L +S +A + VA +LL+ L
Sbjct: 181 LIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ 231
>gi|164687764|ref|ZP_02211792.1| hypothetical protein CLOBAR_01406 [Clostridium bartlettii DSM
16795]
gi|164603538|gb|EDQ97003.1| hypothetical protein CLOBAR_01406 [Clostridium bartlettii DSM
16795]
Length = 500
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 79/246 (32%), Gaps = 22/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I++TR + + E+I +G P+ +P +++ L + Y + +TS
Sbjct: 257 IMVTRSRSQNSKLVERIMDLGGNPIEIPTIKIEKVQDNKELENEIKNLKDYTYLVLTSKN 316
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + +IG A++ ++G + E
Sbjct: 317 GVDIFFDKLDEMGLDCRALANIKVCSIGAATSKAIIRRGIKPDIQP--EKAVGESLYDEL 374
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
K + + + ++ K L E + + Y S + + L+ N
Sbjct: 375 KDIVSKEDKILIPRAKNAREFLVKKLNEI-SNVTEVVTYESVMDDSKKEEAISALEEGNL 433
Query: 168 DAILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D I F + S+V F +L + + + I + V + S
Sbjct: 434 DYITFASSSTVTNFINLIGEENKDKLSNTKIISIGKITTKTILDNGLEVYKESEKASIES 493
Query: 224 LLKLLP 229
+++ +
Sbjct: 494 MIEAMS 499
>gi|125975013|ref|YP_001038923.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Clostridium thermocellum ATCC
27405]
gi|256005101|ref|ZP_05430071.1| uroporphyrin-III C-methyltransferase [Clostridium thermocellum DSM
2360]
gi|281418569|ref|ZP_06249588.1| uroporphyrin-III C-methyltransferase [Clostridium thermocellum
JW20]
gi|125715238|gb|ABN53730.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Clostridium thermocellum ATCC
27405]
gi|255990952|gb|EEU01064.1| uroporphyrin-III C-methyltransferase [Clostridium thermocellum DSM
2360]
gi|281407653|gb|EFB37912.1| uroporphyrin-III C-methyltransferase [Clostridium thermocellum
JW20]
gi|316939174|gb|ADU73208.1| uroporphyrin-III C-methyltransferase [Clostridium thermocellum DSM
1313]
Length = 493
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 72/236 (30%), Gaps = 19/236 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++T P K + R K++ +G V P + + + I TSS ++
Sbjct: 257 NVLVTGPKKTSERLAGKLRGLGAHVVEYPCIETEPLDFDID---IREHSWIIFTSSLGVT 313
Query: 62 TLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ I A+G +A + G F + Q
Sbjct: 314 IFFKKLYENKLDSRYLYNKKIAAVGSQTAEELLKHGICADFVPGKFDGRHLAEELLQSGK 373
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+P+ ++ K D + I I Y ++ I + + + I F
Sbjct: 374 ISPEDKVVIFRAKDGTQAIVDIFENNNIHYTDISVYETKCIENE----RIDISGFNYITF 429
Query: 173 YARSSVLYFFSLPLP--AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ S V F +C+ A A A ++ +S+++
Sbjct: 430 TSESCVKGFAHSFKNTIDYSKINAICIGEQTAKATRAYG-MNTIISDVATVSSMVE 484
>gi|323155205|gb|EFZ41389.1| uroporphyrinogen-III synthase [Escherichia coli EPECa14]
gi|323177813|gb|EFZ63397.1| uroporphyrinogen-III synthase [Escherichia coli 1180]
Length = 231
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 68/231 (29%), Gaps = 17/231 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
+++ +G + PL F R+ + LA + S +++ + +
Sbjct: 1 MSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQD 60
Query: 72 PIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ + LA Q + ++ ++ K + L G
Sbjct: 61 RKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGN 120
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFS 183
D L + +CY I Y E M+ + ++ + + +S
Sbjct: 121 GGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVTMVVVTSGEMLQQLWS 180
Query: 184 LPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L + L +S +A + VA +LL+ L
Sbjct: 181 LIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ 231
>gi|15889909|ref|NP_355590.1| uroporphyrinogen-III synthase [Agrobacterium tumefaciens str. C58]
gi|15157860|gb|AAK88375.1| Uroporphyrinogen III synthase HEM4 [Agrobacterium tumefaciens str.
C58]
Length = 246
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 12/240 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M IV+TRP + RT K++ +G+ PV++PL + IH E A+ GAIA+TS+E+L
Sbjct: 1 MRIVVTRPQRSGERTAAKLEALGHAPVLLPLFHPIHHGERATSALSDPAGAIAVTSAEAL 60
Query: 61 STLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L + P+FA+G A+A A++ GF QIF +++ L ++ + + T
Sbjct: 61 RALATCEEQLAPYLSKPLFAVGGATAEAAQETGFEQIFTASGDALGLTVLVKQHRAFLTE 120
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFY 173
++PL+YL G+PR FE+ L IP R +DCY E T++ L + D +L Y
Sbjct: 121 EEPLLYLAGRPRGSVFEEGLAAAGIPFRTVDCYEMLPSDISENTLETTLLDTTADMVLLY 180
Query: 174 ARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + FF + F+C+S N+ +P ++ A P E ++ +LL
Sbjct: 181 SSEAARAFFHHVSADKYVTALAATKFICISRNVLFLVPEIFRANAKAAEEPSEAAMFELL 240
>gi|118592005|ref|ZP_01549399.1| putative uroporphyrinogen III synthase [Stappia aggregata IAM
12614]
gi|118435301|gb|EAV41948.1| putative uroporphyrinogen III synthase [Stappia aggregata IAM
12614]
Length = 238
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 16/238 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++TRP RT E+++ +G++ P+ + + A+A +S ++
Sbjct: 1 MRFLVTRPQPDCRRTAERLRALGHVADEAPVLKTVEV--DSAEIGVEGMSALAFSSRRAV 58
Query: 61 STLPAN----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ L A+ R P+F +G+A+A R+ GFT++ N LA++I++ + +
Sbjct: 59 AILSAHSRIDDFRKLPVFTVGDATALACREAGFTKVHSANGNIDALAQLILDHRSGLSS- 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYA 174
++Y + R+ E L + R + Y + +A +T+ + L D +L Y+
Sbjct: 118 GEVLYPAAEDRSGDLEGLLAAGGVSCRTVVVYRMEAVARLSSTVVDSLNGNAFDGVLIYS 177
Query: 175 RSSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
R + F +L + LS A + + + V VA P ETSLL L
Sbjct: 178 RRTAEAFLALVRSHGLDHILSGLPVYALSRQSAEPLSEA--SQVRVAAAPNETSLLDL 233
>gi|125585192|gb|EAZ25856.1| hypothetical protein OsJ_09696 [Oryza sativa Japonica Group]
Length = 308
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 74/242 (30%), Gaps = 16/242 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
+V+TR K + ++K + +PL + ++ L + + I ITS E+
Sbjct: 49 VVVTRERGKNAKLIAALEKHNVQSLELPLIKHVEGPDTDRLSAVLRDEKFDWITITSPEA 108
Query: 60 LSTLPANF----CRHTPIFAIGEASACLARQKGFTQI----FHGKDNSINLAKIIVEQKV 111
+ + I +G + + + + + E
Sbjct: 109 AAVFLEGWKAAGNPKVRIAVVGAGTERVFDEVIQYNDGSLEVAFSPSKAMGKFLASELPR 168
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++Y ++ L + ++ Y + + + + +A +
Sbjct: 169 TTETTCKVLYPASAKAGHEIQNGLSNRGFEVTRLNTYTTVSVQDVDPLILKPALSAPVVA 228
Query: 172 FYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S++ + +L A C+ ASA + P S+L+
Sbjct: 229 VASPSALRAWLNLASQVDNWGNAIACIGETTASAAKKFGLKSIYYPTTPGLDGWVESILE 288
Query: 227 LL 228
L
Sbjct: 289 AL 290
>gi|313647158|gb|EFS11613.1| uroporphyrinogen-III synthase [Shigella flexneri 2a str. 2457T]
gi|332084957|gb|EGI90139.1| uroporphyrinogen-III synthase [Shigella dysenteriae 155-74]
gi|332750973|gb|EGJ81378.1| uroporphyrinogen-III synthase [Shigella flexneri 4343-70]
gi|332751060|gb|EGJ81464.1| uroporphyrinogen-III synthase [Shigella flexneri K-671]
gi|332997910|gb|EGK17517.1| uroporphyrinogen-III synthase [Shigella flexneri K-218]
gi|332998255|gb|EGK17857.1| uroporphyrinogen-III synthase [Shigella flexneri K-272]
gi|333019517|gb|EGK38798.1| uroporphyrinogen-III synthase [Shigella flexneri K-304]
Length = 231
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 68/231 (29%), Gaps = 17/231 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
+++ +G + PL F R+ + LA + S +++ + +
Sbjct: 1 MSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQD 60
Query: 72 PIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ + LA Q + ++ ++ K + L G
Sbjct: 61 RKWPQLPTYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGN 120
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFS 183
D L + +CY I Y E M+ + ++ + + +S
Sbjct: 121 GGRELIGDTLTVRGAEVTFCECYQRCAIHYDGAEEAMRWQSREVTMVVVTSGEMLQQLWS 180
Query: 184 LPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L + L +S +A + VA +LL+ L
Sbjct: 181 LIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ 231
>gi|324328366|gb|ADY23626.1| uroporphyrinogen-III synthase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 250
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 75/237 (31%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
+++TR +A + +++ G IP+ +PL SY + TS
Sbjct: 9 VLVTRAQHQAKQMSVAVKEKGGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLERLKQKLPVTTKIAAVGVKTKLELEKRGYRVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y +++ + + L+ D I F +
Sbjct: 129 RILFPKGNLARDVIPVALREMGVSLDELIVYVTKENVEKKQELIEALEVGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y + + +LL+
Sbjct: 189 STVTSFVRLLEDTNWREWTKKCTIACIGPITEKEA-SLYFPHIIMPKEYTVEALLQC 244
>gi|308051394|ref|YP_003914960.1| uroporphyrinogen III synthase HEM4 [Ferrimonas balearica DSM 9799]
gi|307633584|gb|ADN77886.1| Uroporphyrinogen III synthase HEM4 [Ferrimonas balearica DSM 9799]
Length = 254
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 72/235 (30%), Gaps = 8/235 (3%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M++++TRP + +K+ +G P+ + + + + + S ++
Sbjct: 1 MHLLLTRPDGRIGPLADKLAALGVRTTRAPMVTLVDNPD-AGPSPLDTVDGAFFVSPTAV 59
Query: 61 STLPANFCRHTPIFAIG--EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
P A A ++ + ++ + K
Sbjct: 60 DCAHQRLQGKWPDIAYFAVGGGTAAALRRYGVEPICPPPGEETTEGVLALPDWQYLTGKR 119
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARSS 177
+ + G L ++ + Y Q +P T+++ QN D IL +
Sbjct: 120 MAIVRGVGGREVMAATLRADGFDVQFWELYRRQRPEWPAQTVQSWRQNGVDVILATSGEI 179
Query: 178 VLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F++ + +L +A + V + ++++ L
Sbjct: 180 LANLFAVTPLSDHDWLRNCLWLVPVERVAELAQQRGCQRIQVMGGAGDDAIVRCL 234
>gi|294501420|ref|YP_003565120.1| uroporphyrinogen-III synthase [Bacillus megaterium QM B1551]
gi|294351357|gb|ADE71686.1| uroporphyrinogen-III synthase [Bacillus megaterium QM B1551]
Length = 257
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 83/247 (33%), Gaps = 25/247 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
++ITR K+A +++K+G IP+ +P+ F+ L + I TS
Sbjct: 11 KVLITREAKQAHSFAAQVKKLGGIPLSLPVLTFVRSNNEKEVEDVLLSIDCFDWIVFTSQ 70
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+S + + A+GE +A L + K+ ++
Sbjct: 71 NGISFFFEWLKELNISWSVLKRLKVAAVGEKTAKLLEKHDVNVQLVPKEYVA--ESLLES 128
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-NA 167
K + + ++ + G+ +D L E + + Y + E +K L+
Sbjct: 129 LKANVSHHERVLLVRGQLARSVLKDGLKE--CEVTDLVVYQTIRNQDSERLVKQHLETGI 186
Query: 168 DAILFYARSSVLYFFSLPLPAK------ISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
DAI F + S+V +F +C+ + V
Sbjct: 187 DAITFTSSSTVRFFVESVKDIPNWLELINRTKVVCIGPITSQTASEYGIKH-LVPNTYTI 245
Query: 222 TSLLKLL 228
++ +L
Sbjct: 246 NGMIDML 252
>gi|209693831|ref|YP_002261759.1| uroporphyrinogen III synthase HemD [Aliivibrio salmonicida LFI1238]
gi|208007782|emb|CAQ77904.1| uroporphyrinogen III synthase HemD [Aliivibrio salmonicida LFI1238]
Length = 248
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 28/240 (11%), Positives = 64/240 (26%), Gaps = 15/240 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ + + + G++ + PL RE + I S
Sbjct: 1 MTILVTRPEQESQALCDALHQAGHLAISHPLLTIHPGRELSQLPSLFSSLSDGDFIIAVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASAC-----LARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ + + G K + + ++ +
Sbjct: 61 QHAVEHAQNSLQMQQTEWKKGVNYIAVGQKSAQHLKKYVVDTVHFPTHSDSEHLLALPVL 120
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA-- 169
T K + L G L + + + Y ++ + Q
Sbjct: 121 KNTKGKKALILRGNGGRDLIFQALDNSGVEVSYCETYQRKNTPFNGALKAAEWQKEHVDT 180
Query: 170 ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
I+ + + +F L + L S I + + +L
Sbjct: 181 IIVTSGEQLSFFTEQFTLIHLHWVLHCRLLVPSERINQLAQQLGYQHIETVGGASNSDVL 240
>gi|229013678|ref|ZP_04170807.1| Uroporphyrinogen III synthase HEM4 [Bacillus mycoides DSM 2048]
gi|228747600|gb|EEL97474.1| Uroporphyrinogen III synthase HEM4 [Bacillus mycoides DSM 2048]
Length = 250
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 72/238 (30%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKERSGIPLEIPLLRMEGTSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDGLETKIPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAETFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L + I F +
Sbjct: 129 RILFPKGNLARDVIPVKLREFGVFLDELIVYGTKVNVEKKQELITALKLGEVNIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ Y + V V +LL+ +
Sbjct: 189 STVDSFVRLLEGTNWREWTKKCTIACIGPITEKEA-NLYFSHVIVPKEYTVEALLQCI 245
>gi|218528778|ref|YP_002419594.1| uroporphyrinogen III synthase HEM4 [Methylobacterium
chloromethanicum CM4]
gi|218521081|gb|ACK81666.1| uroporphyrinogen III synthase HEM4 [Methylobacterium
chloromethanicum CM4]
Length = 236
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 16/239 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I ++RP A RT ++ ++G+ ++ P+ + + +TS+ +
Sbjct: 1 MRIWVSRPEPGASRTARRLAELGHAALVAPVLRIAPSDGP---PPTGRFDGLILTSANAA 57
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ L A P+FA+G +A A + G + ++++LA+++ P L+
Sbjct: 58 APLAAAGLPEAPVFAVGTRTAERAERAGLRSVHCADGDAVSLARLVAAHV---RPGGTLL 114
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-----AILFYAR 175
+ G+ R L + Y + A + L D A L ++R
Sbjct: 115 HAAGEDRKAEPAASLTAAGYRVTTWTAYAALAEAALPEPVVQGLMGRDGAPLAAALHFSR 174
Query: 176 SSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S L A +S AF CLS ++A + VA P E +LL L
Sbjct: 175 RSAEIAVHLSGKAGLSGAFRALAHYCLSPDVALGLVELGVAAHFVAARPSEEALLAGLA 233
>gi|209965648|ref|YP_002298563.1| uroporphyrinogen-III synthase [Rhodospirillum centenum SW]
gi|209959114|gb|ACI99750.1| uroporphyrinogen-III synthase [Rhodospirillum centenum SW]
Length = 240
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 12/235 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I++TRP +A +T + G+ + +PL A+ +TS +
Sbjct: 4 ILVTRPQPEADQTAADLAARGFTTLTVPLLEVRLLPGPA--LELAGVQALLLTSINGVRA 61
Query: 63 -LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
L R P+ A+G + AR GF + + ++++LA +I ++ + L++
Sbjct: 62 TLARTDRRDLPVLAVGRRTGDEARAAGFADVREAEGDAVHLAALI--RREVDPAAGRLLH 119
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSVL 179
+ G + L H + I Y + + + + L+ + LF++ +
Sbjct: 120 VSGVDLAADLAELLGPHGYTVDRIVGYEAVAAEHLSPEVVSALRQADISIALFFSPRTAR 179
Query: 180 YFFSLPLPAKISAA-----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F L A ++ CLS +ASA V VA P +LL LLP
Sbjct: 180 TFVRLATAAGLADRCAGMSAFCLSPAVASAAAGLPWQAVRVAERPAAGALLDLLP 234
>gi|114331037|ref|YP_747259.1| uroporphyrinogen-III synthase [Nitrosomonas eutropha C91]
gi|114308051|gb|ABI59294.1| uroporphyrinogen-III synthase [Nitrosomonas eutropha C91]
Length = 260
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 26/242 (10%), Positives = 62/242 (25%), Gaps = 18/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
I+ITRP+ +A +I+ +G P + P+ L A + S
Sbjct: 11 ILITRPLHQAGNLAARIKGLGGEPWLFPVLEISDSENKQPLLDMIARLDDFDLAVFVSPN 70
Query: 59 SLSTLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
++ + + A + ++ + ++ ++
Sbjct: 71 AVERVMPLVHAERRWPEHVRVATVGKGSARALEHHGIPAVIVPEDGSDSEALLRVPQLQI 130
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--IL 171
K +I G D L + + ++CY + + ++
Sbjct: 131 MQGKRIIIFRGNGGRKLLGDTLRDRGASVDYVECYRRHRPEVDPLPLLKYWHDNGIQAVV 190
Query: 172 FYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVAC---FPKETSL 224
+ + F + A + I + L
Sbjct: 191 ISSSEGLDNLFDMIGKTGQQLLRATAVFTAHDRIECKARELGIRKIYRTPLGDEGTVQGL 250
Query: 225 LK 226
L+
Sbjct: 251 LE 252
>gi|229062157|ref|ZP_04199481.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH603]
gi|228717140|gb|EEL68816.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH603]
Length = 250
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 72/238 (30%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKERSGIPLEIPLLRMEGTSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLRKKLPGSIKIAAVGVKTKLELEKRGYQVHFVPTSFVAETFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L + I F +
Sbjct: 129 RILFPKGNLARDVIPVKLREFGVFLDELIVYGTKVNVEKKQELITALKLGEVNIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ Y V V +LL+ +
Sbjct: 189 STVDSFVRLLEGTNWREWTKKCTIACIGPITEKEA-NLYFPHVIVPKEYTVEALLQCI 245
>gi|115451201|ref|NP_001049201.1| Os03g0186100 [Oryza sativa Japonica Group]
gi|122247448|sp|Q10QR9|HEM4_ORYSJ RecName: Full=Uroporphyrinogen-III synthase, chloroplastic;
AltName: Full=Hydroxymethylbilane hydrolyase
[cyclizing]; AltName: Full=Uroporphyrinogen-III
cosynthase; Flags: Precursor
gi|108706563|gb|ABF94358.1| uroporphyrinogen-III synthase family protein, putative, expressed
[Oryza sativa Japonica Group]
gi|113547672|dbj|BAF11115.1| Os03g0186100 [Oryza sativa Japonica Group]
gi|215741467|dbj|BAG97962.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 302
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 74/242 (30%), Gaps = 16/242 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
+V+TR K + ++K + +PL + ++ L + + I ITS E+
Sbjct: 49 VVVTRERGKNAKLIAALEKHNVQSLELPLIKHVEGPDTDRLSAVLRDEKFDWITITSPEA 108
Query: 60 LSTLPANF----CRHTPIFAIGEASACLARQKGFTQI----FHGKDNSINLAKIIVEQKV 111
+ + I +G + + + + + E
Sbjct: 109 AAVFLEGWKAAGNPKVRIAVVGAGTERVFDEVIQYNDGSLEVAFSPSKAMGKFLASELPR 168
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++Y ++ L + ++ Y + + + + +A +
Sbjct: 169 TTETTCKVLYPASAKAGHEIQNGLSNRGFEVTRLNTYTTVSVQDVDPLILKPALSAPVVA 228
Query: 172 FYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S++ + +L A C+ ASA + P S+L+
Sbjct: 229 VASPSALRAWLNLASQVDNWGNAIACIGETTASAAKKFGLKSIYYPTTPGLDGWVESILE 288
Query: 227 LL 228
L
Sbjct: 289 AL 290
>gi|229105102|ref|ZP_04235753.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock3-28]
gi|228678283|gb|EEL32509.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock3-28]
Length = 250
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 75/238 (31%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI---HDRESVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL H R SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKERSGIPLEIPLLRMEGTSHRRIHHTARQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + P+ A + + +A++ E+ + + +
Sbjct: 69 VTFFLDGLEKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEVFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYAR 175
+++ G L + L + Y ++ + + L + + I F +
Sbjct: 129 RILFPKGNLARDVIPVKLRGIGVSLDELIVYGTKVNVEKKQELITALKVRKVNIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ Y V V +LL+ +
Sbjct: 189 STVDSFVRLLEGTNWREWTKKCTIACIGPITEKEA-NLYFPHVIVPKEYTVEALLQCI 245
>gi|330720491|gb|EGG98788.1| Uroporphyrinogen-III synthase [gamma proteobacterium IMCC2047]
Length = 264
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 73/241 (30%), Gaps = 14/241 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
+++TRP +A ++ G I + P+ E + Y + + S
Sbjct: 20 RVLVTRPAAQAGGLIRAVENQGGIAIACPMVAIEPLPEKQTSKQKIINFDQYDGVIVVSR 79
Query: 58 ESLSTLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ ++ P + + + N ++ +++
Sbjct: 80 NAAQMALDWLDQYWPQLPAHQQWFVVGEGTANCLRNAGIEPLVPTSGFNSEALLEFEQLQ 139
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAI 170
Q+ + G+ L + ++ Y + Y +T + L + DA+
Sbjct: 140 QLEQQRFLIFKGEGGRELLTQQLESRGAAVDWLELYRRVTVNYTDTQLSGLFSHGGPDAL 199
Query: 171 LFYARSSVLYFFSLPLPAK---ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + + S A + + +S IA V + P + S++
Sbjct: 200 VATSSGILTAMDSQLADALPMRLELPLVVVSQRIAEFAKQLGYRHVFTSPSPADDSIVAT 259
Query: 228 L 228
L
Sbjct: 260 L 260
>gi|149174091|ref|ZP_01852719.1| uroporphyrin-III C-methyltransferase [Planctomyces maris DSM 8797]
gi|148847071|gb|EDL61406.1| uroporphyrin-III C-methyltransferase [Planctomyces maris DSM 8797]
Length = 509
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 74/251 (29%), Gaps = 23/251 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I ITR ++ ++ ++G PV++P + ++ + Y + TS+
Sbjct: 258 RIGITRAEDQSETEIQQAIRLGAQPVLLPTIEISKPADQAPVDQAISRLEHYQWLVFTSA 317
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ H I IG ++A A+ + E
Sbjct: 318 NGVRYFMDRLWELGFDSRQLAHLKIATIGPSTAEALLAYRLRADLTPP---QYRAEALAE 374
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--N 166
+ L++ G + L + + + Y + D+A T LL+
Sbjct: 375 ALKPLVAHQSLLWAGANRGREVLQTELAKVSATVEKVVVYENHDVAAWNTESLRLLESGE 434
Query: 167 ADAILFYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
D + + S F L A S +S + A + + A
Sbjct: 435 VDWVGLSSPSIARNFERLLSDAARTQLGKSIKLASISPVTSQAALEAGLQIDAEAKDYHW 494
Query: 222 TSLLKLLPLRR 232
+ + R
Sbjct: 495 DGIFAAIQEYR 505
>gi|317129819|ref|YP_004096101.1| uroporphyrinogen III synthase HEM4 [Bacillus cellulosilyticus DSM
2522]
gi|315474767|gb|ADU31370.1| Uroporphyrinogen III synthase HEM4 [Bacillus cellulosilyticus DSM
2522]
Length = 257
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 79/248 (31%), Gaps = 21/248 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSES 59
++ TR I +A + ++K G V +PL + + M +Y I TS+ S
Sbjct: 10 LLNTRAIHQAAPLTKYLEKHGGNVVEIPLISMKKTSDPKIKEAIKMIHTYDYIVFTSTNS 69
Query: 60 LSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+S + +G+++ ++GF + K
Sbjct: 70 ISFFLEILKEQGLSKREICNMKFAVVGKSTLRSLNKEGFDADIIPPIFDA--EHLASALK 127
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--D 168
+ + ++Y L + I + Y + + + L++
Sbjct: 128 TELSAGEKVLYPKSDLARDVLTRELHKVGIQIDDPSVYETVFRIDDKAKLNELIKKNLIH 187
Query: 169 AILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I+F + S+V FFS + F + + + A+ + + +
Sbjct: 188 IIIFTSPSTVHSFFSQVDKEVVMNNVDKLHFAVIGSVTSRALKDEGIEEMIIPKEFTTEA 247
Query: 224 LLKLLPLR 231
L+ +
Sbjct: 248 LVHAIMKH 255
>gi|229098937|ref|ZP_04229872.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock3-29]
gi|229117966|ref|ZP_04247326.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock1-3]
gi|228665415|gb|EEL20897.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock1-3]
gi|228684435|gb|EEL38378.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock3-29]
Length = 250
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 75/238 (31%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI---HDRESVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL H R SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKERSGIPLEIPLLRMEGTSHRRIHHTARQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + P+ A + + +A++ E+ + + +
Sbjct: 69 VTFFLDGLEKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEVFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYAR 175
+++ G L + L + Y ++ + + L + + I F +
Sbjct: 129 RILFPKGNLARDVIPVKLRGIGVSLDELIVYGTKVNVEKKQELITALKVRKVNVITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ Y V V +LL+ +
Sbjct: 189 STVDSFVRLLEGTNWREWTKKCTIACIGPITEKEA-NLYFPHVIVPKEYTVEALLQCI 245
>gi|226356924|ref|YP_002786664.1| porphyrin biosynthesis protein hemD [Deinococcus deserti VCD115]
gi|226318914|gb|ACO46910.1| putative porphyrin biosynthesis protein hemD (Uroporphyrinogen-III
C-methyltransferase and Uroporphyrinogen-III synthase)
[Deinococcus deserti VCD115]
Length = 500
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 86/242 (35%), Gaps = 20/242 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSSE 58
+ +TR + A + ++ G + +PL F + L + +TS++
Sbjct: 260 VAVTRTREGASALGDVLRTRGAEVLEVPLIRFAPTSDHDALHARLRDVNDVSWLLLTSNQ 319
Query: 59 SLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+++ L + + A+G ++A +Q+G F +
Sbjct: 320 AITALMEHLQALGLDARHLAGVRLAAVGPSTAASLQQRGLRADFVPSTPGARH----LAD 375
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ P + ++L + + L + + + Y ++ A +++ L+ DA
Sbjct: 376 ELPVRPGEVALHLTSQLAEDSLQRLLEARGVVYQRAELYRTEVAALDP-VLRSRLRTVDA 434
Query: 170 ILFYARSSVLYFFSLPLPA--KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + S+ + +L P ++ + + A A + + VA +L
Sbjct: 435 VTLASGSAARHLAALAGPEFDPLTLRVVAMGPQTAEAARQAGFRHLQVAETASLEALADA 494
Query: 228 LP 229
+
Sbjct: 495 VE 496
Score = 40.2 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 11/124 (8%), Positives = 31/124 (25%), Gaps = 10/124 (8%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD---AILFY 173
+ + + D L + + + L++ + +L
Sbjct: 258 RTVAVTRTREGASALGDVLRTRGAEV-LEVPLIRFAPTSDHDALHARLRDVNDVSWLLLT 316
Query: 174 ARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ ++ + + + A+++ V P L
Sbjct: 317 SNQAITALMEHLQALGLDARHLAGVRLAAVGPSTAASLQQRGLRADFVPSTPGARHLADE 376
Query: 228 LPLR 231
LP+R
Sbjct: 377 LPVR 380
>gi|170077809|ref|YP_001734447.1| uroporphyrin-III synthase/methyltransferase [Synechococcus sp. PCC
7002]
gi|169885478|gb|ACA99191.1| uroporphyrin-III synthase/methyltransferase [Synechococcus sp. PCC
7002]
Length = 496
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 66/247 (26%), Gaps = 23/247 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSE 58
I+ITR ++ + + + G + MP L +++ + +TS+
Sbjct: 247 ILITRAASQSSEFTKLLAETGAKVLEMPALEIREPSTWEPLDQAIATLETFDWLILTSAN 306
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I +G+ + RQ G + D + ++
Sbjct: 307 GVEYFFQRLETLGKDVRALGKLKIAVVGKKTEKFLRQHGLKADYIPPDFIADS--LVENF 364
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
QK L L + + + Y S + L+
Sbjct: 365 PDPLQNQKILFPRVETGGRKILVQELAQQGAQVVEVPAYESGCPRQIPAAVWQALEAQTI 424
Query: 170 --ILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + +V F+ L + + ++ V A
Sbjct: 425 DLVTFASSKTVRNFWQLIQQQGGDLALLKPLKIASIGPQTSQTCLNLFQRVDLEAEVYTL 484
Query: 222 TSLLKLL 228
L ++
Sbjct: 485 EGLRDVI 491
>gi|307154037|ref|YP_003889421.1| uroporphyrin-III C-methyltransferase [Cyanothece sp. PCC 7822]
gi|306984265|gb|ADN16146.1| uroporphyrin-III C-methyltransferase [Cyanothece sp. PCC 7822]
Length = 507
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 71/253 (28%), Gaps = 29/253 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+++TR +++ + + +Q+ G + MP +A + + + +TS+
Sbjct: 249 VIVTRAAEQSSKFSDLLQEQGATVIEMPALEITPPSSWEGLDQAIATLKDFHWLILTSAN 308
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I +G+ +A +Q G + D + +I
Sbjct: 309 GVHYFFERLANAGKDTRALAGVKIAVVGKKTAESLKQYGLLADYIPPDFVADS--LIEHF 366
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD- 168
+ QK L L + + Y S +LQ
Sbjct: 367 PENLSGQKILFPRVETGGREVLVKDLSVVGAEVVEVAAYQSGCPKQINPQAWQVLQEGMA 426
Query: 169 -AILFYARSSVLYFFSLPLPA------------KISAAFLCLSNNIASAIPASYKNVVTV 215
+ F + +V F+ L A + + + ++ V
Sbjct: 427 DIVTFASSKTVQNFYHLVKVALTSKSKYTPQSLLENVCLASIGPQTSKTCYEAFGRVDVE 486
Query: 216 ACFPKETSLLKLL 228
A L L
Sbjct: 487 AQEYTLEGLTAAL 499
>gi|206890558|ref|YP_002248560.1| uroporphyrinogen III synthase/methyltransferase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742496|gb|ACI21553.1| uroporphyrinogen III synthase/methyltransferase
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 509
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 65/252 (25%), Gaps = 26/252 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
++ITR + ++ MG + P F + + + Y I S
Sbjct: 256 RVLITR---QLTEDYLLLEDMGAELFVFPTIAFAPPEDFKELDRAIEKIKEYKFIVFPSP 312
Query: 58 ESLSTLPANFCRHTPIFAIGEAS-------ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ F + + F + + +I K
Sbjct: 313 RAVNFFFERFLSLGRDMRDLKGVLLCAIGRETAKSLRNFGINADIIPDEYSSEALITMFK 372
Query: 111 VLFTPQK------PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ ++Y F + + + I + Y + + L
Sbjct: 373 EKILNFQPSAFSLKILYPRSDLALKGFVEEMEKIGIQVDAPVTYRTIKPTEHGKRLARFL 432
Query: 165 Q--NADAILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACF 218
+ F + SS + ++ A + A A+ + V +
Sbjct: 433 REGKITIATFTSPSSFNNLIDILKDDALNMLKEVAIAVIGKTTAKAVEEAGYRVSIIPEK 492
Query: 219 PKETSLLKLLPL 230
+++ +
Sbjct: 493 STIKHMVEAIIK 504
>gi|75909680|ref|YP_323976.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Anabaena variabilis ATCC 29413]
gi|75703405|gb|ABA23081.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Anabaena variabilis ATCC 29413]
Length = 517
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 63/247 (25%), Gaps = 21/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
I++TR ++ + +++ +G + MP L A + + +TS+
Sbjct: 264 ILVTRSSGQSSQFSDRLTTLGATVIEMPALEIGSPSSWEELDQAIANLSQFEWLILTSTN 323
Query: 59 SLSTLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ ++ I +A +VE
Sbjct: 324 GVDYFFERLNLQGKDTRALAGVKIAVVGEKTSQSLKQRGIQADFIPPNFVADSLVEHFPE 383
Query: 113 FTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DA 169
K +++ L + + Y S + + L+N D
Sbjct: 384 SLLNKKILFPRVESGGREILVKELSAKGAEVIEVAAYQSCCPSSIPPAAELALKNHTIDI 443
Query: 170 ILFYARSSVLYFFSL--------PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
I F + +V +F L + + V A
Sbjct: 444 ITFASSKTVQFFHQLVDNIFPHNIPNTLAGICIASIGPQTSKTCHTLLGRVDVEAEEYTL 503
Query: 222 TSLLKLL 228
L + +
Sbjct: 504 DGLTQSI 510
>gi|30248605|ref|NP_840675.1| uroporphyrinogen III synthase HEM4 [Nitrosomonas europaea ATCC
19718]
gi|30180200|emb|CAD84502.1| Uroporphyrinogen III synthase HEM4 [Nitrosomonas europaea ATCC
19718]
Length = 259
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 62/242 (25%), Gaps = 18/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
I+ITRP+ +A ++++G P + P+ L A + S
Sbjct: 13 ILITRPLHQAGGLATWVRELGGEPWLFPVLEISDSENKQPLLDLIARLDEFDLAVFVSPN 72
Query: 59 SLSTLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
++ + + + A + ++ + + ++ +
Sbjct: 73 AVEKVIPLVQVSHSWPRHVLVATVGKGSARVLERYGITNVIVPEEGSDSEALLRMPQFQV 132
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--IL 171
+ ++ G D L E + I+CY + ++ ++
Sbjct: 133 MQGRHVVIFRGNDGRRLLGDTLRERGASVEYIECYRRHKPEADPLPLLKHWRDDGIQAVI 192
Query: 172 FYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVA---CFPKETSL 224
+ + F + I + L
Sbjct: 193 ISSSEGLDNLFDMIGETGQQLLKATPVFTAHERIERKARELGIRKIYRTLLGDEGTVQGL 252
Query: 225 LK 226
L+
Sbjct: 253 LE 254
>gi|330908103|gb|EGH36622.1| uroporphyrinogen-3 synthase [Escherichia coli AA86]
Length = 231
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 68/231 (29%), Gaps = 17/231 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
+++ +G + PL F R+ + LA + S +++ + +
Sbjct: 1 MSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQD 60
Query: 72 PIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ + LA Q + ++ ++ K + L G
Sbjct: 61 RKWPRLPTYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKCALILRGN 120
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFS 183
D L + +CY I Y E M+ + ++ + + +S
Sbjct: 121 GGRELIGDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVTTVVVTSGEMLQQLWS 180
Query: 184 LPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L + L +S +A + VA +LL+ L
Sbjct: 181 LIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ 231
>gi|149376991|ref|ZP_01894745.1| Uroporphyrinogen-III synthase [Marinobacter algicola DG893]
gi|149358768|gb|EDM47238.1| Uroporphyrinogen-III synthase [Marinobacter algicola DG893]
Length = 270
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 69/242 (28%), Gaps = 14/242 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
I++ RP +A R + G +MPL E + + + S
Sbjct: 15 RILVCRPQPEADRLASRFCDAGADARVMPLIAREPLPEDPATRTLILNLDEFAHVIAVSP 74
Query: 58 ESLSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ + L P G + + ++ ++
Sbjct: 75 YAAALLLDWLDEWWPQTPTGIHWYGVGAGTATVLSNYGLETRQPETGHTSEDLLQLPELA 134
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAI 170
+ ++ + G+ L + V+ Y Y + T+ +L + +AI
Sbjct: 135 TLNHEKVLVVRGQEGRELIPQTLERRGARVTVLPLYRRFCPDYDKATLNAMLNDFSPEAI 194
Query: 171 LFYARSSVLYFFSLPLP---AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + ++ +L + + IA + + ++S++
Sbjct: 195 VTLSGETLNNLIALSDNTGHNLENTLLVVPVERIAEQARLAGLRRTCIPGSLADSSIVAA 254
Query: 228 LP 229
+
Sbjct: 255 VA 256
>gi|111073592|emb|CAL29438.1| hypothetical protein OW4-A [Wolbachia endosymbiont of Onchocerca
volvulus]
Length = 237
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 92/239 (38%), Gaps = 17/239 (7%)
Query: 1 MY---IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M I++TRP+ +L T+ ++K GY + P+ H + + + + TS
Sbjct: 1 MRMKSILLTRPLLDSLNTRNALKKHGYKVYIEPVFTIKHLQPDI---SAYKFDVVISTSK 57
Query: 58 ESLSTLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
S+ PI +G ++ A+ GF+ I N L I +
Sbjct: 58 NSVKAFSQICKIGDLPIITVGNSTMQTAKDLGFSDIVSADSNVDGLISFIKNHYSIAV-- 115
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYA 174
+Y+ G+ + + L E +R + Y + KNLL ++F++
Sbjct: 116 -KFLYIRGQEVSCDLKKRLSEEGFCVREVILYKTIVKKSLTNRCKNLLSGNKINGVVFFS 174
Query: 175 RSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F SL L + + + +S NIA ++ + + + P SL+ ++
Sbjct: 175 SQTARVFCSLVLKSGLSHTISNIIAYTMSKNIADSLKSIKWKKIITSRLPTRESLINII 233
>gi|254456399|ref|ZP_05069828.1| uroporphyrinogen-III synthase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083401|gb|EDZ60827.1| uroporphyrinogen-III synthase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 218
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 85/219 (38%), Gaps = 12/219 (5%)
Query: 15 TQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP-ANFCRHTPI 73
K + +G+ +PL + S+G I TS+ ++ L +
Sbjct: 1 MILKFKSLGHQVSHLPLLVVEKV--NYDSVNFPSFGGIIFTSANAIKFLDLKGIDKKILC 58
Query: 74 FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFED 133
F +GEA+ AR GF + + N NL ++I++ LIY+ G+ + +
Sbjct: 59 FCVGEATEKTARNNGFQNVIAAEGNVENLKELILQN--FDKKDGSLIYISGETVSTDLDQ 116
Query: 134 YLIEHKIPLRVIDCYYS-QDIAYPETTMKNLLQNAD-AILFYARSSVLYFFSLPLPAKI- 190
L++ ++ I Y + + + E +K L + Y+++S F + ++
Sbjct: 117 QLLKVGYNVKRIVNYRTSHNKNFNEEFVKELKLKMPDIVYVYSQNSAASFLNYIKLQQLE 176
Query: 191 ----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ +C+ +S + + + +E LL
Sbjct: 177 SLWMNTNLMCIGEKTSSILNEIKWKKIFLFNPGEEEFLL 215
>gi|300024950|ref|YP_003757561.1| uroporphyrinogen III synthase HEM4 [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526771|gb|ADJ25240.1| Uroporphyrinogen III synthase HEM4 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 246
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 90/242 (37%), Gaps = 16/242 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M++++TRP + +++++G + PL + + + ITS +L
Sbjct: 1 MHVLVTRPKDDGETLKAELEQLGCKVTLEPLIRIVSNDIPATAI--DETSTLIITSRNAL 58
Query: 61 STLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
L + P+ A+G +A LAR+ GFT IF G L I +
Sbjct: 59 RALAKSPALTRALTRPLLAVGPGTAALAREMGFTDIFEGPGTGAELVPEITRR--SEAGG 116
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYA 174
+YL F L E I +R + Y S + + L++ + ++ +
Sbjct: 117 GAFVYLSADRMAFDVPSALAERGIAIRRVVAYRSVAAETLSPQVADALRDGAINVVVLMS 176
Query: 175 RSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIP-ASYKNVVTVACFPKETSLLKLL 228
+ + + +++C+S +A+ + + VA P +L +L
Sbjct: 177 PRTSETWAKIAPVAAKPNDLSDISYVCISEAVANVVKSELGPQAIIVANRPNHEEILIVL 236
Query: 229 PL 230
Sbjct: 237 KR 238
>gi|302142364|emb|CBI19567.3| unnamed protein product [Vitis vinifera]
Length = 304
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 74/243 (30%), Gaps = 16/243 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSE 58
+V+TR K + + + G + PL + L ++ I ITS E
Sbjct: 47 KVVVTREHGKNGKLINVLAEHGINCLEFPLIQHTKGPDLDRLSSVLSDTAFDWIIITSPE 106
Query: 59 S----LSTLPANFCRHTPIFAIGEAS----ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ L A + +G + + + + + + E
Sbjct: 107 AGLVFLEAWKAAGAPCVKVGVVGSGTQSVFEEVMQSSKQSLRVAFAPSKATGKVLASELP 166
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++Y + E+ L + ++ Y + + + + +A +
Sbjct: 167 KDGNRTCTVLYPASAKASGEIEEGLSSRGFEVTRLNTYTTVPVNDVDEMVFKQALSAPVV 226
Query: 171 LFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKET----SLL 225
+ S+V + +L + A C+ A A S V P S+L
Sbjct: 227 AVASPSAVRAWVNLLSESERWGNAVACIGETTALAAKRSGLRNVYYPTNPGLEGWVDSIL 286
Query: 226 KLL 228
+ L
Sbjct: 287 EAL 289
>gi|315925349|ref|ZP_07921560.1| uroporphyrinogen III synthase/methyltransferase [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621250|gb|EFV01220.1| uroporphyrinogen III synthase/methyltransferase [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 508
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 75/242 (30%), Gaps = 23/242 (9%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES-----VFLAMQQSYGAIAITSSE 58
++TR +A T EKI+++G ++ P E+ + Y + TS
Sbjct: 259 LVTRSRTQASSTVEKIRELGGEAIVYPTIRIRPVPEAMDRLGEAIDALGHYSHLIFTSVN 318
Query: 59 SLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ I AIG+A+A ++G K +++ +
Sbjct: 319 GVELFYDQLAVRGQDSRALAGLTITAIGKATAAALEERGVVPDVVPKRY--IGEELVDKL 376
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
L ++ K D L P+ + Y + + + +L +
Sbjct: 377 SPLIGAGDRVLLPRSKNARSLVADELARL-CPVTELPIYETIREDRTDIDVAAMLAKREI 435
Query: 170 --ILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + ++ YF + +A + + + + V A
Sbjct: 436 DYITFTSSTTAKYFAEKLGADRFDLVQNAKTVSIGPQTSKQMRELGMAVDIEAAAYTIDG 495
Query: 224 LL 225
LL
Sbjct: 496 LL 497
Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 14/137 (10%), Positives = 35/137 (25%), Gaps = 9/137 (6%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM- 160
L + K + + + + + E V + + +
Sbjct: 241 LRDELRFFDNKPFFGKTFLVTRSRTQASSTVEKIRELGGEAIVYPTIRIRPVPEAMDRLG 300
Query: 161 --KNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLC------LSNNIASAIPASYKNV 212
+ L + ++F + + V F+ + L + A+A+
Sbjct: 301 EAIDALGHYSHLIFTSVNGVELFYDQLAVRGQDSRALAGLTITAIGKATAAALEERGVVP 360
Query: 213 VTVACFPKETSLLKLLP 229
V L+ L
Sbjct: 361 DVVPKRYIGEELVDKLS 377
>gi|225458531|ref|XP_002282338.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 298
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 75/243 (30%), Gaps = 16/243 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITSSE 58
+V+TR K + + + G + PL + L+ ++ I ITS E
Sbjct: 47 KVVVTREHGKNGKLINVLAEHGINCLEFPLIQHTKGPDLDRLSSVLTDTAFDWIIITSPE 106
Query: 59 S----LSTLPANFCRHTPIFAIGEAS----ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ L A + +G + + + + + + E
Sbjct: 107 AGLVFLEAWKAAGAPCVKVGVVGSGTQSVFEEVMQSSKQSLRVAFAPSKATGKVLASELP 166
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++Y + E+ L + ++ Y + + + + +A +
Sbjct: 167 KDGNRTCTVLYPASAKASGEIEEGLSSRGFEVTRLNTYTTVPVNDVDEMVFKQALSAPVV 226
Query: 171 LFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKET----SLL 225
+ S+V + +L + A C+ A A S V P S+L
Sbjct: 227 AVASPSAVRAWVNLLSESERWGNAVACIGETTALAAKRSGLRNVYYPTNPGLEGWVDSIL 286
Query: 226 KLL 228
+ L
Sbjct: 287 EAL 289
>gi|163942211|ref|YP_001647095.1| uroporphyrinogen-III synthase [Bacillus weihenstephanensis KBAB4]
gi|229169205|ref|ZP_04296919.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH621]
gi|163864408|gb|ABY45467.1| Uroporphyrinogen III synthase HEM4 [Bacillus weihenstephanensis
KBAB4]
gi|228614271|gb|EEK71382.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH621]
Length = 250
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 72/238 (30%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKERSGIPLEIPLLRMEGTSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLRKKLPGPIKIAAVGVKTKLELEKRGYQVEFVPTAFVAETFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L + I F +
Sbjct: 129 RILFPKGNLARDVIPVKLREFGVFLDELIVYGTKVNVEKKQELITALKLGEVNIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ Y V V +LL+ +
Sbjct: 189 STVDSFVRLLEGTNWREWTKKCTIACIGPITEKEA-NLYFPHVIVPKEYTVEALLQCI 245
>gi|332290270|ref|YP_004421122.1| uroporphyrinogen-III synthase [Gallibacterium anatis UMN179]
gi|330433166|gb|AEC18225.1| uroporphyrinogen-III synthase [Gallibacterium anatis UMN179]
Length = 252
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 69/245 (28%), Gaps = 17/245 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP E + K+G + P + L + + S
Sbjct: 1 MGILVTRPEDAGQHLTEMLNKVGVAAIYAPFIKIEAGEQLNDVPQKLQQLAAGDYVISVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + + Q H + N ++ +
Sbjct: 61 QYAVQYAHQVLQNTGFGWRKDVHYFAVGRKTAALLSEATQQPAHYPFANENSEGLLALPQ 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL-LQNADA 169
+ + +I L G+ L + + + CY Q E +K D
Sbjct: 121 MQNCNGRRVIILRGQSGRELLPQQLPQRGAAVETVACYCRQAQQLSEAELKFFSRAGIDT 180
Query: 170 ILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNV--VTVACFPKETS 223
I+ + + Y +S + +S+ + + + + S
Sbjct: 181 IVITSGEILRYLLDFIPKSEHNWLMSCKLVVISDRLMQLALEAGWQQDKIILTEKADNLS 240
Query: 224 LLKLL 228
LLK +
Sbjct: 241 LLKTI 245
>gi|27117224|emb|CAD48147.1| uroporphyrinogen III synthase [Bacillus megaterium]
Length = 257
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 82/247 (33%), Gaps = 25/247 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
++ITR K+A +I+K+G IP+ +P+ F L + I TS
Sbjct: 11 KVLITREAKQAHSFAAQIKKLGGIPLSLPVLTFARSNNEKEVEDVLLSIDCFDWIVFTSQ 70
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+S + + A+GE +A L + K+ ++
Sbjct: 71 NGISFFFEWLKELNISWSALKRLKVAAVGEKTAKLLEKHDVNVQLVPKEYVA--ESLLES 128
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-NA 167
K + + ++ + G+ +D L E + + Y + E +K ++
Sbjct: 129 LKANVSHHERVLLVRGQLARSVLKDGLKE--CEVTDLVVYQTIRNQDSERLVKQHVETGI 186
Query: 168 DAILFYARSSVLYFFSLPLPAK------ISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
DAI F + S+V +F +C+ + V
Sbjct: 187 DAITFTSSSTVRFFVESVKDIPNWLELINRTKVVCIGPITSQTASEYGIKH-LVPNTYTI 245
Query: 222 TSLLKLL 228
++ +L
Sbjct: 246 NGMIDML 252
>gi|299137630|ref|ZP_07030811.1| Uroporphyrinogen III synthase HEM4 [Acidobacterium sp. MP5ACTX8]
gi|298600271|gb|EFI56428.1| Uroporphyrinogen III synthase HEM4 [Acidobacterium sp. MP5ACTX8]
Length = 255
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 72/249 (28%), Gaps = 19/249 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
+++TR +A E+++ G P+++P L ++ + TS+
Sbjct: 5 RVLVTRAPHQASELAEQLRMAGIDPILIPAIETTSPVSFAALDAALQHLDTFHWLLFTSA 64
Query: 58 ESLSTLPANF-----CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQK 110
++ R + A+G+A+A G T + ++
Sbjct: 65 NAVEVFARRLLSPSGVRMPRMAAVGQATARAVEAAGLTVDLIPQQAVAESFAQALLPYAS 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN---- 166
+ + + H + L + + Y + ++ +
Sbjct: 125 QPDGSSTRFLLVRAEQARDHLPETLGAAGAEVIIAPAYRTVIPESSIPAIREMFSRPENY 184
Query: 167 ADAILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
DA+ F + S+ F+L A + + + + A
Sbjct: 185 PDAVTFTSSSTAQNLFALLEAAGATLPPQILRVSIGPITSQTLVQLGFPPHVEAKEASVV 244
Query: 223 SLLKLLPLR 231
SL +
Sbjct: 245 SLAAAIVEH 253
>gi|146280318|ref|YP_001170474.1| hypothetical protein Rsph17025_4324 [Rhodobacter sphaeroides ATCC
17025]
gi|145558559|gb|ABP73169.1| hypothetical protein Rsph17025_4324 [Rhodobacter sphaeroides ATCC
17025]
Length = 246
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 88/235 (37%), Gaps = 9/235 (3%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M++++TRP +A + +++ G+ + P+ S + +
Sbjct: 1 MHVLLTRPTLQAEAMRPSLEEKGHRVSVEPVLDVSPVDFSHEALRDSRTIVVTSVHASLR 60
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ R PI+A+G +A + GF+ + ++ +L +I+ + +
Sbjct: 61 IAELPSIDRTVPIYAVGAGTAAPLHRAGFSCVHEAAGDAPSLLDLIL--TKRSASEGRIT 118
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSV 178
YL G L H + + Y + +++L+ + D ILF + +
Sbjct: 119 YLSGWDITEDMAAALKRHGHDAQRLVAYRATPAKSLSPATQDMLRRGDIDCILFMSYRTA 178
Query: 179 LYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+F L A +S + +S +A + + +A P +++ +L
Sbjct: 179 HFFTLLCDKAGLSPCLRTISAAAMSEKVARGLCRTDWRETGIAANPSREAMVDML 233
>gi|154505784|ref|ZP_02042522.1| hypothetical protein RUMGNA_03324 [Ruminococcus gnavus ATCC 29149]
gi|153793802|gb|EDN76222.1| hypothetical protein RUMGNA_03324 [Ruminococcus gnavus ATCC 29149]
Length = 481
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 78/246 (31%), Gaps = 26/246 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL-------AMQQSYGAIAIT 55
I+ TRP + + R +++++G + +P + L Q+S + T
Sbjct: 230 ILTTRPRQNSSRLAGRLRELGAQVIELPSITTKPVWPNEVLGTILGSIREQESEQWLVFT 289
Query: 56 SSESLSTLPANFC-----------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
S + T H + AIG +A Q G + A
Sbjct: 290 SPIGVQTFWKQIRMLKMDVRNVFLPHVKVAAIGSGTAKELEQFGVFADVMPRTFCA--AA 347
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD--IAYPETTMKN 162
+ P+ ++ L K + L + + + Y + + T++
Sbjct: 348 LGEAIAGEAAPKSRIVLLRAKQGSEELLPPLKNAGLKVEDVPLYETVCKLQETLKETIEK 407
Query: 163 LLQNADA--ILFYARSSVLYFFS-LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+ + + F + S+V F LP +C+ A+ + ++
Sbjct: 408 QQRQGEIDLVTFTSASTVRGFVQALPGIDTTKIRAVCIGEQTANEAKRYGMQ-IQISEEA 466
Query: 220 KETSLL 225
S++
Sbjct: 467 SVESMV 472
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 11/118 (9%), Positives = 31/118 (26%), Gaps = 6/118 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYF-----IHDRESVF-LAMQQSYGAIAIT 55
IV+ R + + ++ G +PL +E++ Q + T
Sbjct: 361 RIVLLRAKQGSEELLPPLKNAGLKVEDVPLYETVCKLQETLKETIEKQQRQGEIDLVTFT 420
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
S+ ++ + + + + +V + +
Sbjct: 421 SASTVRGFVQALPGIDTTKIRAVCIGEQTANEAKRYGMQIQISEEASVESMVLKILEL 478
>gi|120970163|gb|ABM45934.1| uroporphyrinogen III synthase [Triticum aestivum]
Length = 308
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 79/246 (32%), Gaps = 16/246 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
+V+TR K + ++K + +PL + ++ L + + I +TS E+
Sbjct: 50 VVVTREQGKNAKLVASLEKHNVHSLELPLIQHVEGPDADRLSAVLRDEKFDWITVTSPEA 109
Query: 60 LSTLPANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI----IVEQKV 111
+ + I +G +A + + + + E
Sbjct: 110 AAVFLEGWKAAGSPKVRIAVVGAGTARTFDEVLQSNDGPLEVAFSPSKALGKVLASELPR 169
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++Y ++ L + ++ Y + + E + L +A +
Sbjct: 170 TSETASKVLYPASAKAGHEIQNGLSARGFEVTRLNTYSTVPVHDVEPQILKLALSAPVVA 229
Query: 172 FYARSSVLYFFSLP-LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S++ + +L K S + C+ ASA V P S+L+
Sbjct: 230 VASPSALRAWLNLMSRVDKWSNSVACIGETTASAAKKLGLESVYYPATPGLEGWVESILE 289
Query: 227 LLPLRR 232
L +
Sbjct: 290 ALRAHK 295
>gi|159904903|ref|YP_001548565.1| uroporphyrinogen III synthase HEM4 [Methanococcus maripaludis C6]
gi|159886396|gb|ABX01333.1| Uroporphyrinogen III synthase HEM4 [Methanococcus maripaludis C6]
Length = 244
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/243 (10%), Positives = 69/243 (28%), Gaps = 17/243 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +VITRP++K + ++ G+ +++P + + Y I TS +
Sbjct: 1 MKVVITRPLEKGKDFSKMLEDAGFETIIIPTLELVF---KKAEINLEKYSWIVFTSPRGI 57
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
N + + + + K + ++ + +L QK +
Sbjct: 58 EGFFRNLNSEDIDKVLSKKIGAIGIETAKEFEKIFKKPVDVIPELYTAENLLEALQKEVK 117
Query: 121 YLGGKPRNFHFEDY-LIEHKIPLRVIDCYYSQDIAYPETTMKN---------LLQNADAI 170
+++ + +I Y S++ +K +
Sbjct: 118 IGEKVLVPTTPSTRDILKEGLNADLIFVYSSEEPENISEKLKELEKQVFSENKDNKRVIL 177
Query: 171 LFYARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + + FF + + + + + + +L
Sbjct: 178 TFTSGLTAKNFFKHCRSEFLELLKEQHVVSIGPITKKNVDSLGFDSSMPEKNYTVEGMLS 237
Query: 227 LLP 229
++
Sbjct: 238 VIK 240
Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 30/118 (25%), Gaps = 10/118 (8%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + F L + +I L+ I+F +
Sbjct: 2 KVVITRPLEKGKDFSKMLEDAGFETIIIPTLELVFKKAEIN-----LEKYSWIVFTSPRG 56
Query: 178 VLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVV-TVACFPKETSLLKLLPL 230
+ FF +S + A +K V + +LL+ L
Sbjct: 57 IEGFFRNLNSEDIDKVLSKKIGAIGIETAKEFEKIFKKPVDVIPELYTAENLLEALQK 114
>gi|332710949|ref|ZP_08430885.1| uroporphyrinogen-III synthase [Lyngbya majuscula 3L]
gi|332350263|gb|EGJ29867.1| uroporphyrinogen-III synthase [Lyngbya majuscula 3L]
Length = 553
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/270 (12%), Positives = 75/270 (27%), Gaps = 47/270 (17%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+++TR ++ + + + + G + MP +A ++ + +TSS
Sbjct: 272 VLVTRSASQSQKFNQLLAQQGATIIEMPTLVITPPSSWAGLDYAIANLANFDWLILTSSN 331
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + I +G+ +A +Q F + +A +VE
Sbjct: 332 GVDYFFKRLLDNGKDARALVGIKIAVVGKKTAASLKQHNLQPDFIPPN---FVADSLVEH 388
Query: 110 KVLFTPQKPLIYLGGKPR-NFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
K +++ + L E + + Y S Y + + Q
Sbjct: 389 FPESLTNKQVLFPRVETGGREVLVKELTEKGAQVVEVAAYESGCPDYMAPAILDAWQQRA 448
Query: 168 -DAILFYARSSVLYFFSLPLPA----------------------------KISAAFLCLS 198
D + F + +V F+ L A + +
Sbjct: 449 IDIVTFASSKTVKNFYKLLKQAFNSSTETNQAYSSADGEQSPPLKTLHSLLDNVCIASIG 508
Query: 199 NNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + V A L + +
Sbjct: 509 PQTSESCRQLLGRVDVEAVEYTLEGLTEAI 538
>gi|304309753|ref|YP_003809351.1| Uroporphyrinogen-III synthase [gamma proteobacterium HdN1]
gi|301795486|emb|CBL43684.1| Uroporphyrinogen-III synthase [gamma proteobacterium HdN1]
Length = 275
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 69/242 (28%), Gaps = 16/242 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITS-- 56
+++TRP R ++Q G + P+ + + +A Y + S
Sbjct: 11 VLVTRPQPHGERLAARVQAAGGEAFVYPVIDIVPRELTPTEQNCIAELDRYSGVISVSVA 70
Query: 57 -----SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
E+ + + +G AS +G +S + E +
Sbjct: 71 ASELGVEACEARWPQWPLDQTWYTVGPASGKPLEGRGLNLHIAVAGSSSETLLALPEFQA 130
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADA 169
+ + L GK + L E + ++ Y A ++ L +
Sbjct: 131 DHVAGQRFLILRGKGGRELLANTLRERGAQVDFVELYTRPPAANDPACLQRFLTSSAPRV 190
Query: 170 ILFYARSSVLYFFSLP---LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
L S+ + + +S +A V A + +LL
Sbjct: 191 ALITNGESLQQLLLQAGEGRERLLQCPVIVVSGRLADYAMQQGFTEVHTASGAHDDALLA 250
Query: 227 LL 228
L
Sbjct: 251 SL 252
>gi|296105313|ref|YP_003615459.1| uroporphyrinogen-III synthase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059772|gb|ADF64510.1| uroporphyrinogen-III synthase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 231
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 66/231 (28%), Gaps = 17/231 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSESLSTLPANFCRHT 71
+++ +G + PL F RE LA Q + S ++ A +
Sbjct: 1 MSRLRALGQVAWSFPLIEFSPGRELSALADHMNTLQEGDLLFALSQHAVEFAHAQLQQQG 60
Query: 72 PIFAIGEASACLARQKGFTQIF------HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ + R + ++ ++ K + L G
Sbjct: 61 LNWPTAPRYFAIGRSTALALHTVSGADVRYPLDRETSEVLLQLPELQTLIGKRALILRGN 120
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFS 183
+ L E + +CY Y + M+ + ++ + + +S
Sbjct: 121 GGRELLGETLRERGADVTFCECYQRCAKHYDGAQEAMRWHTRGITTLVVTSGEMLQQLWS 180
Query: 184 LPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L + L +S +A+ + +A +LL+ L
Sbjct: 181 LVPLWYRENWLLHCRLLVVSERLANLARELGWQDIRIADNADNDALLRALQ 231
>gi|325294022|ref|YP_004279886.1| uroporphyrinogen-III synthase [Agrobacterium sp. H13-3]
gi|325061875|gb|ADY65566.1| putative uroporphyrinogen-III synthase [Agrobacterium sp. H13-3]
Length = 246
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 12/243 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M IV+TRP++ +T K++ +G+ PV++PL + +H + LA+ + AIA+TS+E+L
Sbjct: 1 MRIVVTRPLRSGEKTAAKLEALGHEPVLLPLFHPVHQGQRAILALSEPLSAIAVTSAEAL 60
Query: 61 STLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L R P+FA+GEA+A AR+ GF I G +++ LA ++ E + L
Sbjct: 61 RALRDFRHRLAPHLSKPLFAVGEATAEAAREIGFQNILTGSGDAVALAGLVAEHRPLTES 120
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFY 173
PL+YL G PR FED + I R +DCY Q + ++ L D +L Y
Sbjct: 121 TDPLLYLAGTPRGAVFEDGIAAAGISFRTVDCYEMQPSDLSDDMLETALVKTAADVVLLY 180
Query: 174 ARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + FF A + F+C+S N+ S +P ++ A E ++ +LL
Sbjct: 181 SSEAARAFFRHASSEKYVAALTTTQFVCISRNVLSLVPEIFRANAAAAEGANEAAMFELL 240
Query: 229 PLR 231
+
Sbjct: 241 QRK 243
>gi|307728970|ref|YP_003906194.1| hypothetical protein BC1003_0919 [Burkholderia sp. CCGE1003]
gi|307583505|gb|ADN56903.1| protein of unknown function DUF513 hemX [Burkholderia sp. CCGE1003]
Length = 673
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 67/264 (25%), Gaps = 37/264 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+VITRP ++ ++ G + PL + L + Y + S
Sbjct: 21 VVITRPAGQSSELIARLAAAGVATLDFPLIDIAPVADDTPLRAALGSLERYALVVFVSPN 80
Query: 59 SLSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAK 104
++ A P A SA + ++ +
Sbjct: 81 AIDHAFAKSGAIWPHALPLGVVGPGSVRALARHGVSAPAYQVISPAAGVDDENGRFDSEG 140
Query: 105 IIVEQKVLFTPQ----KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPETT 159
+ + K ++ + G D L E + + Y
Sbjct: 141 LYAAIEAALGETGLEGKRVLIVRGDGGREWLADRLREAGAQVETVAAYRRLVPEPSIGAW 200
Query: 160 MKNL---LQNADAILFYARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPAS 208
+ A A L + V L A + IA A
Sbjct: 201 ARVHQLLAGEAHAWLLTSSEGVRNLHELAHEHLTADEIAQLKRALLVTPHPRIAQTARAL 260
Query: 209 YKNVVTVACFPKE---TSLLKLLP 229
+ +TV+ E +LL LP
Sbjct: 261 GFDRITVSGAGDERIAQALLAALP 284
>gi|56476046|ref|YP_157635.1| uroporphyrinogen III synthase [Aromatoleum aromaticum EbN1]
gi|56312089|emb|CAI06734.1| Uroporphyrinogen III synthase [Aromatoleum aromaticum EbN1]
Length = 257
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/244 (14%), Positives = 68/244 (27%), Gaps = 17/244 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR---ESVFLAMQQSYGAIAITSSE 58
++ +TRP+ +A E I G IPV P+ + S
Sbjct: 12 HVAVTRPVGQADSLCEAIAARGGIPVCFPVLAIGAVDGARLDDIATRLDQFDLAFFVSPN 71
Query: 59 SLSTL-------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ A R + LA + + + E +
Sbjct: 72 AVQHALTPILARRAWPQRVVVATVGKGSERALAAFGFRSVVAPASGFDSESVLALPEFRP 131
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DA 169
+ ++ G + L EH + + CY + +L + DA
Sbjct: 132 EAVRGRRIVIFRGDGGRDLLGETLREHGADVEYVSCYRRFQPDQDPAPLLDLARRGALDA 191
Query: 170 ILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
I + V ++ + + IA+ A+ V P + L+
Sbjct: 192 ITLTSSEGVAKLVAIVGAEGLRLLCPVPIFAPHSRIAAHARAAGFVRVVET-GPGDEGLI 250
Query: 226 KLLP 229
+ L
Sbjct: 251 RALE 254
>gi|56964394|ref|YP_176125.1| uroporphyrinogen III cosynthase [Bacillus clausii KSM-K16]
gi|56910637|dbj|BAD65164.1| uroporphyrinogen III cosynthase [Bacillus clausii KSM-K16]
Length = 252
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 82/237 (34%), Gaps = 11/237 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+I+ITR ++ R ++ +G IP +PL + + L + + TS+
Sbjct: 8 HILITRDERQNERWAAELAVLGAIPHSLPLIQCVTRNLTPALRETFAHLHQFAWVVFTSA 67
Query: 58 ESLSTLPANF---CRHTPIFAIGEASACLARQKGFTQIFHG-KDNSINLAKIIVEQKVLF 113
+ + + A+G +A L ++G F + LAK +V
Sbjct: 68 NGVRAFFDLYKGQPFMAKVAAVGPKTAQLLEEQGLHCDFIPSEYTGEALAKELVPLLAPH 127
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILF 172
+ + K + + + + Y + A E K L Q D +
Sbjct: 128 SDVLVVKGQLAKRTVCDILS-SSDRQATVTEMIVYDTLCPAGAEEQAKRLQQKTFDYVTL 186
Query: 173 YARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+ +++ ++ A I A C+ A A + + A L+ +
Sbjct: 187 TSTSAAVHYANVAPAAGIRAKTIACIGPVTARAAKQCGLSPLVTASEYTVKGLIDTI 243
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 28/112 (25%), Gaps = 2/112 (1%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK--NLLQNADAILF 172
K ++ + +N + L + + L ++F
Sbjct: 5 KGKHILITRDERQNERWAAELAVLGAIPHSLPLIQCVTRNLTPALRETFAHLHQFAWVVF 64
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + V FF L A + A + + + +L
Sbjct: 65 TSANGVRAFFDLYKGQPFMAKVAAVGPKTAQLLEEQGLHCDFIPSEYTGEAL 116
>gi|322435226|ref|YP_004217438.1| Uroporphyrinogen III synthase HEM4 [Acidobacterium sp. MP5ACTX9]
gi|321162953|gb|ADW68658.1| Uroporphyrinogen III synthase HEM4 [Acidobacterium sp. MP5ACTX9]
Length = 258
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 73/244 (29%), Gaps = 17/244 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
I+ITR +A + + G IP+++P + Q+Y + TS+
Sbjct: 9 RILITRAAGQASTLATLLAERGAIPILIPTIELAPPTFWQPLDQAIQTIQTYDWLLFTSA 68
Query: 58 ESLSTLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ N A + A Q + +A+ E +
Sbjct: 69 NAVEAYVQRARTLNLPAQARRIAAIGPATARAVQGTGLAQAVDLIPARYVAESFAEALLP 128
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA----D 168
P +I + H L+ L + + Y + +K N D
Sbjct: 129 HAPNARMILVRAAEARDHLTQTLMAAGAHLTIAEAYRTIVPPASIEALKYAFSNQAEPLD 188
Query: 169 AILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
AI F + S+ +L A + + + A+ A SL
Sbjct: 189 AITFTSASTARNLATLMESAALLIPHGTTLASIGPITSQAMRDLNLTPTIEAKDSTIPSL 248
Query: 225 LKLL 228
++ L
Sbjct: 249 VEAL 252
>gi|190571509|ref|YP_001975867.1| uroporphyrinogen-III synthase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018911|ref|ZP_03334719.1| uroporphyrinogen-III synthase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357781|emb|CAQ55236.1| uroporphyrinogen-III synthase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995862|gb|EEB56502.1| uroporphyrinogen-III synthase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 235
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 90/237 (37%), Gaps = 15/237 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I++TRP+ +L T+ ++K GY + P+ + + + + TS S
Sbjct: 1 MKSILLTRPLLDSLSTRSTLKKYGYKVFIEPVFTIKYLNPDI---SAHEFDVVISTSKNS 57
Query: 60 LSTLPANFCRH-TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ + PI +G ++ A+ GF+ I N L I
Sbjct: 58 VKAFSQICKEYGFPIITVGNSTMQAAKNLGFSDIISADSNVDGLISCIKSHYSNTI---K 114
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
+Y+ G+ + + L E +R + Y + KNLL + + F++
Sbjct: 115 FLYIRGQEVSCDLKKRLSEEGFNVREVVLYKTITKRSLTNRCKNLLLDGKIDSVAFFSSQ 174
Query: 177 SVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F SL L + + + +S NIA ++ + + P SL+ ++
Sbjct: 175 TARVFCSLVLKSGLSPVMNNTVAYTMSKNIADSLKLIKWKKIITSRLPTGESLIDII 231
>gi|251778445|ref|ZP_04821365.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|243082760|gb|EES48650.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 491
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 64/233 (27%), Gaps = 13/233 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR K+A ++K++ MG + ++ + ++Y I TS S
Sbjct: 251 NICVTRSQKQAATLKQKLRDMGAEVTALSAIEIESTASNLDSYMGDLENYDHIVFTSVNS 310
Query: 60 LSTLPANF----CRHTPIFAIGEASACLARQ--KGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A A Q + I K A +I K
Sbjct: 311 VDIFFDYLIENKYDVRKLQAKVSAIGKATWQALERRGIICFVKAREFIGAGLIKVLKPHV 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ D L E + + Y + K D + F
Sbjct: 371 KENEKVLIPCSSLAKSDIADALTEVGAEVDRVFIYDTVK---GRVRNKRAFDEVDIVFFT 427
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ S+V + I + + + + + + L
Sbjct: 428 SPSTVYNMIDMVGLDAIKEKQIIAIGTRTSKPLEELGIKA-YICKEHSQDGFL 479
>gi|164451707|gb|ABY56788.1| uroporphyrinogen III synthase [Hordeum vulgare]
Length = 299
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 78/246 (31%), Gaps = 16/246 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
+V+TR K + ++K + +PL + ++ L + + I +TS E+
Sbjct: 50 VVVTRERGKNAKLVAALEKHNVHSLELPLIQHVQGPDADRLSAVLRDEKFDWITVTSPEA 109
Query: 60 LSTLPANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK----IIVEQKV 111
+ + I +G +A + + + + E
Sbjct: 110 AAVFLEGWKAAGSPKVRIAVVGAGTARTFDEVLQSNDGSLEIAFSPSKALGKVLASELPR 169
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++Y ++ L + ++ Y + + + + NL + +
Sbjct: 170 TSETACKVLYPASAKAGHEIQNGLSARGFEVTRLNTYSTVPVQDVDPQILNLALSTPVVA 229
Query: 172 FYARSSVLYFFSLP-LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S++ + +L S + C+ ASA V P S+L+
Sbjct: 230 VASPSALRAWLNLTSRVDDWSNSVACIGETTASAAKKLGLESVYYPATPGLEGWVESILE 289
Query: 227 LLPLRR 232
L +
Sbjct: 290 ALRAHK 295
>gi|297170484|gb|ADI21514.1| uroporphyrinogen-III methylase [uncultured verrucomicrobium
HF0070_15G23]
Length = 501
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 79/247 (31%), Gaps = 20/247 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+V+TR I ++ + + K G V +P + + L SY + TS
Sbjct: 248 RVVVTRAITQSTNLKSLLNKQGAEVVEIPTIRLVEPDDKEPLKDVLLGLGSYQWLVFTSV 307
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNS-INLAKIIV 107
+ + F + I A+G A+A R+ + + +AK
Sbjct: 308 NGVDRFFSYFFKGFDDLRDLGGCRIAAVGSATASRLREMHLKVDLMPMEYTAEGIAKAFE 367
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQ 165
E + + + L + N L + + Y + + +
Sbjct: 368 ESEEFSIENENVALLRAQVANPDLPKALELLGAIVDDVPVYKNIPETEDRLGNVARLSEE 427
Query: 166 NADAILFYARSSVLYF---FSLPL-PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
A+ I+F + S+V F F L K + + A+ + A +
Sbjct: 428 GAEWIVFSSASAVENFDSKFDLIRIRKKHNIKVASIGPQTTKALVEVGVSPEVEAKVFAD 487
Query: 222 TSLLKLL 228
+ L+ L
Sbjct: 488 SGLVDAL 494
>gi|168334266|ref|ZP_02692463.1| uroporphyrinogen III synthase/methyltransferase [Epulopiscium sp.
'N.t. morphotype B']
Length = 785
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/235 (14%), Positives = 70/235 (29%), Gaps = 18/235 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES--VFLAMQQSYGAIAITSSESL 60
IV+TR ++ + +G + P ++ + SY IA TS +
Sbjct: 556 IVVTRARSQSSSLSTALADLGAHVIEAPAFSIEPHPDNLLATIKSIDSYDFIAFTSQNGV 615
Query: 61 STLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
SA ++ + + N ++ + +
Sbjct: 616 EIFFETLFASGLDARSLAHAQITAIGSATASKLQQYGIHADIIPPKANSESLLAVLESIV 675
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
TP L+ + L+ + + Y + + D I F
Sbjct: 676 TPAHKLLLVTATNSRD----LLLNLSCHVDKVCAYATVPATTMPSIAAA-----DYITFT 726
Query: 174 ARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F ++ A I A + + N ++A+ ++ A L+ +
Sbjct: 727 CSSAVENFMAISGNANIIAKTVSIGNVTSAALQKYGLSIDLQAATATIADLVDTI 781
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 37/119 (31%), Gaps = 6/119 (5%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K ++ + ++ L + + + + + + D I F +++
Sbjct: 554 KTIVVTRARSQSSSLSTALADLGAHVIEAPAFSIEPHPDNLLATIKSIDSYDFIAFTSQN 613
Query: 177 SVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
V FF + + A + + AS + + + SLL +L
Sbjct: 614 GVEIFFETLFASGLDARSLAHAQITAIGSATASKLQQYGIHADIIPPKANSESLLAVLE 672
>gi|146337458|ref|YP_001202506.1| putative uroporphyrinogen-III synthase [Bradyrhizobium sp. ORS278]
gi|146190264|emb|CAL74258.1| putative UROPORPHYRINOGEN-III synthase [Bradyrhizobium sp. ORS278]
Length = 242
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 90/241 (37%), Gaps = 14/241 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP RT + +++ G+ ++ P+ F + Q I +TS+ +L
Sbjct: 1 MAVLVTRPAPDNERTAQALRERGFDVLLAPMLRFEPVALLADVG--QDAAGIVVTSANAL 58
Query: 61 STLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
P+FA+G+ +A AR GF ++ ++ L ++I +
Sbjct: 59 RAAAPQLRSSALLLLPLFAVGDQTAAAARAAGFAKVISAAGDAAALREVIATSGAIEAK- 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYA 174
L+YL G + L + Y + + +L Y+
Sbjct: 118 ATLLYLAGADISRDLAAELGARGFEVVTQTVYRMAQVTSLPREVCEAFAANTIQAVLHYS 177
Query: 175 RSSVLYFFSLPLPAKISAAFL-----CLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
R S F + + + L CLS N+A + + VT+ P E +L+ L
Sbjct: 178 RRSAAAFVAAIRAEGVEISALAVPHGCLSANVAEVLRDAGATQVTIPAHPDENEMLEGLA 237
Query: 230 L 230
Sbjct: 238 R 238
>gi|228960739|ref|ZP_04122378.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228798955|gb|EEM45930.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 250
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 75/236 (31%), Gaps = 13/236 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSES 59
+++TR +A + +++M IP+ +PL + SY + TS
Sbjct: 9 VLVTRAQHQAKQMSVAVKEMSGIPLEIPLLRMEGMSHTQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLKKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPSVIVPKEYTVEALLQ 243
>gi|68171769|ref|ZP_00545115.1| Uroporphyrinogen III synthase HEM4 [Ehrlichia chaffeensis str.
Sapulpa]
gi|88658300|ref|YP_507296.1| uroporphyrinogen-III synthase [Ehrlichia chaffeensis str. Arkansas]
gi|67998808|gb|EAM85514.1| Uroporphyrinogen III synthase HEM4 [Ehrlichia chaffeensis str.
Sapulpa]
gi|88599757|gb|ABD45226.1| uroporphyrinogen-III synthase [Ehrlichia chaffeensis str. Arkansas]
Length = 229
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 79/238 (33%), Gaps = 18/238 (7%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP K +++ +E + K G+ + PL + + + I TS S
Sbjct: 1 MKSLLVTRPKKDSIKIKEYLNKQGFNVYIEPLFSIKYL---ITKININDFDLIISTSQHS 57
Query: 60 LSTLPANFCRHT-PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ L PI +G + A++ GFT + N N+ I
Sbjct: 58 IIALSKITKNWNIPIVTVGNNTMNTAQELGFTSVKSLNGNIDNVISYIKNHNRAN----- 112
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
I + H + I Y + D Y N L IL Y+
Sbjct: 113 -ILYIRGKEVTYNLKKSFNHYHNFQEIILYNTIDRKYLSKCCYNALLQNKISGILLYSSR 171
Query: 177 SVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ L I +S+ IAS + + + P SLL L+P
Sbjct: 172 TAKILIELIAKHNIQDKTRDITIYAMSDKIASTAKQACWKAIKTSDQPTNKSLLSLIP 229
>gi|226228001|ref|YP_002762107.1| putative uroporphyrinogen-III synthase [Gemmatimonas aurantiaca
T-27]
gi|226091192|dbj|BAH39637.1| putative uroporphyrinogen-III synthase [Gemmatimonas aurantiaca
T-27]
Length = 259
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 72/236 (30%), Gaps = 14/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSE 58
I +TR +++ + ++++G +PL++ + L Y + +TS
Sbjct: 9 RIAVTRTVERGGPLADALRRVGATVHEIPLTHIEPLDAAPLHAALRELAHYDWVLLTSVN 68
Query: 59 SLSTL--------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ L + + +G +A G+ + +
Sbjct: 69 AVERLAQAVREVGAESVMESRRLAVVGSTTAAACESHGWRLPTVQPERMQAEGVLDDLAS 128
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
++Y + L + VI Y + A + M L+++ +
Sbjct: 129 RSDVEGSRVLYPAAAGARDVLPEGLRALGAVVDVIATYRTVPDAAGQERMLALVESGEVD 188
Query: 170 -ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ A S++ P + S C+ A A + V + P
Sbjct: 189 LVTLAAPSAMDALLDALPPERASRLPVACIGPVTARAARLAGFPVKVESTAPTVEG 244
>gi|323167551|gb|EFZ53257.1| uroporphyrinogen-III synthase [Shigella sonnei 53G]
Length = 231
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 67/231 (29%), Gaps = 17/231 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
+++ +G + PL F + + LA + S +++ + +
Sbjct: 1 MSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQD 60
Query: 72 PIFAIGEA------SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ + LA Q + ++ ++ K + L G
Sbjct: 61 RKWPRLPNYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGN 120
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFS 183
D L + +CY I Y E M+ + ++ + + +S
Sbjct: 121 GGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVTTVVVTSGEMLQQLWS 180
Query: 184 LPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L + L +S +A + VA +LL+ L
Sbjct: 181 LIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNAANDALLRALQ 231
>gi|317122097|ref|YP_004102100.1| uroporphyrinogen-III synthase [Thermaerobacter marianensis DSM
12885]
gi|315592077|gb|ADU51373.1| Uroporphyrinogen-III synthase [Thermaerobacter marianensis DSM
12885]
Length = 470
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 67/256 (26%), Gaps = 30/256 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSS 57
I ITR ++A E ++++G V +PL LA Q A TS
Sbjct: 206 RIAITRAAEQAGDLAELVRRLGGEAVEIPLIAVEPAEGVAGLDAELADPQGTWW-AFTSR 264
Query: 58 ESLSTLPANFCRHTP-IFAIGEASACLARQKGFTQIFHGKDNSINLA-------KIIVEQ 109
+++ L A+ + + + +L + E
Sbjct: 265 NAVAALAGRLRALGRDARALAGSRVAAVGEATGRALEEAVGIRADLVPATATGGHLWEEL 324
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ--DIAYPETTMKNLLQNA 167
P + +++ G ++E LR Y +
Sbjct: 325 ARRVQPGQRVLWPRGDRAPLEPARPVVEAGAVLRAPVVYRTVLRPREAAALLELVAAGRV 384
Query: 168 DAILFYARSSVLYFFSLPLPAKIS---------------AAFLCLSNNIASAIPASYKNV 212
DA+ + S+ P + +C+ A A V
Sbjct: 385 DAVTLASPSACEALAEAAGPEGLGRFFPGGGPAGPGGRRPLVVCIGPRTARRAAALGLPV 444
Query: 213 VTVACFPKETSLLKLL 228
V L+ L
Sbjct: 445 DRVPERYTVEGLIGAL 460
>gi|28210449|ref|NP_781393.1| uroporphyrinogen III synthase/methyltransferase [Clostridium tetani
E88]
gi|28202886|gb|AAO35330.1| uroporphyrinogen III synthase/methyltransferase [Clostridium tetani
E88]
Length = 485
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/238 (12%), Positives = 70/238 (29%), Gaps = 17/238 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAITSSES 59
I +TR +A +EK+ +G + + + + Y I +TS +
Sbjct: 251 NICVTRSRVQAKELREKLSDLGAQVTEINAIKIKSRDDELEKYVERLKDYKFIVLTSVNA 310
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ L + IG A+ ++G K+ + E K
Sbjct: 311 VNILFDYLVKKEYDIRNIKGRFAVIGPATEKALLKRGIKADIIAKEFVA--EDLFNELKP 368
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ K + + L + + + Y P + + D +L
Sbjct: 369 YLNKDDKIFVPHSKQARQYLVEALKDKGCHVEEVYSYEVVKGEVPN---LEIFDDVDIVL 425
Query: 172 FYARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + S V + K+ + + A + + + +++ L
Sbjct: 426 YTSPSIVRNMIDMIGLEKLKKKTSISIGPITAKELDKNGI-DYIICDEYTTDGMIEKL 482
>gi|229111934|ref|ZP_04241478.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock1-15]
gi|228671498|gb|EEL26798.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock1-15]
Length = 250
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 75/236 (31%), Gaps = 13/236 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLKKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y ++ + + +L+ D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAVLKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPSVIVPEEYTVEALLQ 243
>gi|163783046|ref|ZP_02178041.1| uroporphyrinogen-III synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881726|gb|EDP75235.1| uroporphyrinogen-III synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 244
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 80/230 (34%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TR ++ R ++ +K + V +PL F + SY + S++++
Sbjct: 8 RVILTRSVEDIERDRKLFEKYRFEVVELPLIRTEPLD---FQVPKDSYEYVVFQSAKAVK 64
Query: 62 TLPA--NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + + A+G + + G+ K A+ +V + + +
Sbjct: 65 HFLKSSDIPKGVKVIAVGNRTREELERLGYKVWLVPK---DMSAEGVVNEFP-LGRGETV 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + + L + I+ Y + ++Y E + ++L+ I+F + S+V
Sbjct: 121 LIPRSEQGRDEAVEGLSSKGYRVVTINVYRTSKVSYSEEEVVSILKGGGFIVFASPSAVR 180
Query: 180 YFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSL 224
FF+ A + + + V P +
Sbjct: 181 SFFANLRKGTAKAVLNDLVVVSIGKTTKKELEKFGVTPAIVPPKPLMEEV 230
>gi|296448967|ref|ZP_06890758.1| uroporphyrinogen-III synthase [Clostridium difficile NAP08]
gi|296879792|ref|ZP_06903765.1| uroporphyrinogen-III synthase [Clostridium difficile NAP07]
gi|296262193|gb|EFH08997.1| uroporphyrinogen-III synthase [Clostridium difficile NAP08]
gi|296429081|gb|EFH14955.1| uroporphyrinogen-III synthase [Clostridium difficile NAP07]
Length = 502
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 79/247 (31%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I +TR + EKI +G P+ +P + ++ L Y + +TS
Sbjct: 258 IAVTRSRNQNSVLVEKIMDLGGNPIEIPTIKVEKIQNNIKLENEIKNINKYNYLILTSKN 317
Query: 59 SLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ + AIG A++ +++G K +A+ + E+
Sbjct: 318 AVEIFFEKIYEMNFDLRILSNLKVCAIGSATSNELKKRGIIADIVPKK---FVAESLYEE 374
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ I + + ++ + + Y + + + ++L + +
Sbjct: 375 LMPILNNSDNILIPRAENARDYLVDKLKAICEVTEVHIYRTVIDEDKKDEILDILNSNNI 434
Query: 170 --ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V + I L + I + + + S
Sbjct: 435 DYITFTSSSTVNNLVEIIGKENIKILEKIKTLSIGPITTDTINSLGIKLYKESATSTIDS 494
Query: 224 LLKLLPL 230
L+ L+
Sbjct: 495 LVDLIIK 501
>gi|257124842|ref|YP_003162956.1| uroporphyrin-III C-methyltransferase [Leptotrichia buccalis
C-1013-b]
gi|257048781|gb|ACV37965.1| uroporphyrin-III C-methyltransferase [Leptotrichia buccalis
C-1013-b]
Length = 495
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 71/242 (29%), Gaps = 17/242 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR +K KI ++G + +P + + + Y + S S+
Sbjct: 254 NILVTRNREKQGNISNKINELGGQALSLPFINIEYV--DFEMPDLKEYSTLLFNSINSVI 311
Query: 62 TLPANFCRHT-----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
I +GE +A + F+ + ++ E
Sbjct: 312 GFMRKVKDIRSLGNVKIGVVGEKTAEEIEKYKIIPDFYP--EEYTVERLANESVNFTKEG 369
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ ++++ + + Y + + Y +Q + + + ++ +D ++F + S
Sbjct: 370 EKILFIVSDISPVNEKKYSNLYNRNYEKLVVYKTQKVEVEKEKAEKYIKESDILMFLSSS 429
Query: 177 SVLYFF--------SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F + + I V E L + +
Sbjct: 430 TFKAFADSINLSENEEIKEILKNKIIASIGPVTTKTIEKYGLKVEIEPKKYTEEGLFEKI 489
Query: 229 PL 230
Sbjct: 490 LK 491
>gi|255657373|ref|ZP_05402782.1| porphyrin biosynthesis protein [Clostridium difficile QCD-23m63]
Length = 499
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 79/247 (31%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I +TR + EKI +G P+ +P + ++ L Y + +TS
Sbjct: 255 IAVTRSRNQNSVLVEKIMDLGGNPIEIPTIKVEKIQNNIKLENEIKNINKYNYLILTSKN 314
Query: 59 SLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ + AIG A++ +++G K +A+ + E+
Sbjct: 315 AVEIFFEKIYEMNFDLRILSNLKVCAIGSATSNELKKRGIIADIVPKK---FVAESLYEE 371
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ I + + ++ + + Y + + + ++L + +
Sbjct: 372 LMPILNNSDNILIPRAENARDYLVDKLKAICEVTEVHIYRTVIDEDKKDEILDILNSNNI 431
Query: 170 --ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V + I L + I + + + S
Sbjct: 432 DYITFTSSSTVNNLVEIIGKENIKILEKIKTLSIGPITTDTINSLGIKLYKESATSTIDS 491
Query: 224 LLKLLPL 230
L+ L+
Sbjct: 492 LVDLIIK 498
>gi|229147033|ref|ZP_04275393.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus BDRD-ST24]
gi|228636421|gb|EEK92891.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus BDRD-ST24]
Length = 250
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 74/236 (31%), Gaps = 13/236 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL + SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHTQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLKKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPSVIVPKEYTVEALLQ 243
>gi|331005646|ref|ZP_08329015.1| Uroporphyrinogen-III synthase [gamma proteobacterium IMCC1989]
gi|330420571|gb|EGG94868.1| Uroporphyrinogen-III synthase [gamma proteobacterium IMCC1989]
Length = 266
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 76/248 (30%), Gaps = 21/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-------QQSYGAIAI 54
++++ RP + + +K+ MG + P+ + R+ V Y +
Sbjct: 11 HLLVVRPQTQGQQWAKKLVAMGATVSLQPMMNIVPLRDEVSERDIINHILGFAEYKKVIF 70
Query: 55 TSSESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSIN-LAKII 106
S +++ R+ P FAIG+ +A L ++ + H ++
Sbjct: 71 ISQNAVTYGMQWLDRYWPQLPIDIEFFAIGKTTAALLEEQMQAGVLHYSPEQAMNSEALL 130
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLL 164
K+ + ++ GK + + L+ + D Y Q +
Sbjct: 131 AHPKLQNIADEKILIFRGKNGREYLAEQLMARAAIVAYCDLYERQSPSKNITLDDEFRCT 190
Query: 165 QNADAILFYARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPK 220
+ + ++ ++ + L +A + V A
Sbjct: 191 KKQAILAVHSGETLNNVCENISAEDMKWLKQKTILLPGERVAEMARQAGFVHVITAENAT 250
Query: 221 ETSLLKLL 228
S++ L
Sbjct: 251 HESMVAAL 258
>gi|305680125|ref|ZP_07402935.1| conserved domain protein [Corynebacterium matruchotii ATCC 14266]
gi|305660745|gb|EFM50242.1| conserved domain protein [Corynebacterium matruchotii ATCC 14266]
Length = 260
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 69/231 (29%), Gaps = 15/231 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE------SVFLAMQQSYGAIAIT 55
+ + R +++ +++ G + +P + + + +Y + T
Sbjct: 9 KVAVLRSPEQSHSLITRLETYGAEVISIPTIRIVPPVDLTQLHHAARQLRAGTYEWVVFT 68
Query: 56 SSESLSTLPA----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN---LAKIIVE 108
S+ ++ + T + +G A+A +AR + N L +
Sbjct: 69 SANAVRCIAERMTGPLNSQTRVATVGRATARVARHYHLDPVLQPPITRQNALGLVEAFEP 128
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
++ ++ D L + I Y + P + +LL
Sbjct: 129 ANSRSEERRKILVPHANIAPSTLVDGLKSQGWIVDDIIGYRTILADPPPPNIHDLLVTGQ 188
Query: 169 A--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
I + S++ ++ C+ + +A NV V
Sbjct: 189 ITAICITSGSTIRNLITIAGRPHPQTLLACIGPSAEAATKKLGLNVAVVPE 239
>gi|229087028|ref|ZP_04219182.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock3-44]
gi|228696291|gb|EEL49122.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock3-44]
Length = 254
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 69/239 (28%), Gaps = 13/239 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI---HDRESVFLAMQQSYGAIAITSSES 59
++ITR +A + ++K IP+ +PL Y I TS
Sbjct: 9 VLITRAKHQARQMSVAVKKESGIPMEIPLLRMEGVSQQVFQSVSQQIHLYDWIIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKV-LFTPQK 117
+S P A ++ + +A+ E+ + ++
Sbjct: 69 VSFFLDGLGERIPSTVRIAAVGVKTGQELKKRGYEVCFVPTSFVAETFAEEFGRKLSGKE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L Y ++ + + L+ D + F +
Sbjct: 129 HILFPKGNLARDVIPTKLRELGVLLEEFVVYETKTNDTKQQDLIVALESGKIDVVTFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S+V F L C+ V V +L++ +
Sbjct: 189 STVRSFVKLLEGTNWREWIKKCTIACIGPITEQEARRY-FADVIVPKEYTIEALIQCIS 246
>gi|296446254|ref|ZP_06888201.1| Uroporphyrinogen III synthase HEM4 [Methylosinus trichosporium
OB3b]
gi|296256291|gb|EFH03371.1| Uroporphyrinogen III synthase HEM4 [Methylosinus trichosporium
OB3b]
Length = 245
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 97/232 (41%), Gaps = 12/232 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TR A RT EK++++G+ P++ P++ + ++ ++S+ A+ TS+ +L
Sbjct: 3 RVLVTRARDDAERTAEKLRRLGHEPILAPVTEIVATGAAI---PRESFDAVLATSARALR 59
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
+ + + + + ++A +I + F + +Y
Sbjct: 60 HAGEDVETLRDVPLYVVGARTAEAARARGLHVEAS--ASDVAGLIALLRERFPTPRRFLY 117
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVL 179
L G+ R E++L RV++ Y++Q+ A + + +L Y+ S
Sbjct: 118 LAGRDRKDALEEFLRSCGHETRVVEIYHAQETAALPADALAAMACGEIDVVLHYSARSAA 177
Query: 180 YFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F +L + L LS ++A + + V VA P E SLL+
Sbjct: 178 LFLALTQGRVEARRIEAVAHLALSADVARVLRGAGCTHVRVASSPNEDSLLQ 229
>gi|117924046|ref|YP_864663.1| uroporphyrinogen-III synthase [Magnetococcus sp. MC-1]
gi|117607802|gb|ABK43257.1| uroporphyrinogen-III synthase [Magnetococcus sp. MC-1]
Length = 259
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 82/244 (33%), Gaps = 20/244 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSSE 58
I++TRP +A T I + G P++ P+ +S L S+ + ITS+
Sbjct: 11 ILVTRPQPEADATALLILQAGGTPIITPMLNIAPAEDSQPLQQAIAAIHSFDGVLITSAN 70
Query: 59 SLSTL-------PANFCRHTPIFAIGEASACLARQKGFTQIFH-GKDNSINLAKIIVEQK 110
+ P FA+G +A L R G T + + LA+ I + +
Sbjct: 71 AARAYLDALAAQAQPLSGTPPCFAVGPKTAELLRAGGATVCQPSSRFDGEALAEAINQWQ 130
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ ++ D L + ++ Y + L+
Sbjct: 131 ---GKGRHFLFPRAAIGRETLIDGLENDDHRVTMVAAYRALPAQQLSAQAHRYLREKRVD 187
Query: 170 -ILFYARSSVLYFFSLPLPAKISAA---FLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
LF++ + FF L + + A LS A + + +A SLL
Sbjct: 188 AALFFSSRTATTFFELLISQALEPAEMVLAALSPVTAERMASLGFAAHVIAPQATAESLL 247
Query: 226 KLLP 229
+ L
Sbjct: 248 QALA 251
>gi|158421884|ref|YP_001523176.1| uroporphyrinogen-III synthase [Azorhizobium caulinodans ORS 571]
gi|158328773|dbj|BAF86258.1| uroporphyrinogen-III synthase [Azorhizobium caulinodans ORS 571]
Length = 231
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 79/235 (33%), Gaps = 11/235 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A T ++ +G+ ++ P+ ++ + AIA TS +
Sbjct: 1 MRLLVTRPQPGAGDTARRLAALGHDAIVDPMLRV---AQTHAPLPTGDFTAIAFTSVNGV 57
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
L A+ + A Q F + + P ++
Sbjct: 58 KALAAHAEKTRVRHLPAFAVGSRTAQAARAAGFADVTDCAGDVIALGTALKALPPGSRVL 117
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYARSSV 178
+ G R E L I L + Y + L++ A L Y+ +V
Sbjct: 118 HAAGAERAGDLEGDLAPAGISLALAVLYRTLPADQLAPETLAALKSGAVAAALHYSARTV 177
Query: 179 LYFFSL-----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ LCLS+ +A+ + A V+ P E +LL LL
Sbjct: 178 ESLLEATARGDVTGPFLALRQLCLSHAVAAPLRALGAT-TEVSQTPDEDALLTLL 231
>gi|225569052|ref|ZP_03778077.1| hypothetical protein CLOHYLEM_05131 [Clostridium hylemonae DSM
15053]
gi|225161851|gb|EEG74470.1| hypothetical protein CLOHYLEM_05131 [Clostridium hylemonae DSM
15053]
Length = 513
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 66/249 (26%), Gaps = 28/249 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-------GAIAIT 55
I+ITRP + K++ +G + +P + L + T
Sbjct: 257 ILITRPRMSSSALAGKLRSLGAQVIELPAISTRSISPNFALQRAMKQFGDRAGEEWLLFT 316
Query: 56 SSESLSTLPANFCRHT-------------PIFAIGEASACLARQKGFTQIFHGKDNSINL 102
S + I AIG A+ R G
Sbjct: 317 SPAGVRIFFEQLAEFKMDVRHIFGRSARVKIAAIGSATEKALRGYGLLADVVPDVYCAAG 376
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD--IAYPETTM 160
V P+ + + + L+E + + I Y + + +
Sbjct: 377 LGEAVAACAQ--PRARITAVRAMSGSEELLPPLLEAGLKVDDIPLYETVYETHEQVKEKI 434
Query: 161 KNLLQNADA--ILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVAC 217
++L + + F + S+V F S C+ A ++ A
Sbjct: 435 QSLFEEGGIDAVTFTSASTVKGFVQTMEQLDFQSIHAFCIGAQTAEEAAKFG-MHISTAK 493
Query: 218 FPKETSLLK 226
S+ +
Sbjct: 494 EASMDSMTE 502
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 13/143 (9%), Positives = 38/143 (26%), Gaps = 15/143 (10%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L++ + + ++ + + L + + ++ I+ +
Sbjct: 240 LSEQFCWAEERPLGGRQILITRPRMSSSALAGKLRSLGAQVIELPAISTRSISPNFALQR 299
Query: 162 NLLQ-----NADAILFYARSSVLYFFSLPLPAKISA----------AFLCLSNNIASAIP 206
+ Q + +LF + + V FF K+ + + A+
Sbjct: 300 AMKQFGDRAGEEWLLFTSPAGVRIFFEQLAEFKMDVRHIFGRSARVKIAAIGSATEKALR 359
Query: 207 ASYKNVVTVACFPKETSLLKLLP 229
V L + +
Sbjct: 360 GYGLLADVVPDVYCAAGLGEAVA 382
>gi|260890850|ref|ZP_05902113.1| siroheme synthase [Leptotrichia hofstadii F0254]
gi|260859403|gb|EEX73903.1| siroheme synthase [Leptotrichia hofstadii F0254]
Length = 495
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 28/238 (11%), Positives = 70/238 (29%), Gaps = 17/238 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR +K KI ++G + +P + + + Y + S S+
Sbjct: 254 NILVTRNREKQGNISNKINELGGQALSLPFINIEYV--DFEMPDLKEYSTLLFNSINSVI 311
Query: 62 TLPANFCRHT-----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
I +GE +A + F+ + ++ E
Sbjct: 312 GFMRKVKDIRSLGNVKIGVVGEKTAEEIEKYKIIPDFYP--EEYTVERLASESVNFTKEG 369
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ ++++ + + Y + + Y +Q + + + ++ +D ++F + S
Sbjct: 370 EKILFIVSDISPVNEKKYSDLYNRNYEKLVVYKTQTVKVEKEKAEKYIKESDILMFLSSS 429
Query: 177 SVLYFF--------SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F + + + I V E L
Sbjct: 430 TFKAFADSINLSENEEIKEILKNKIIVSIGPVTTKTIEKYGLKVGIEPKKYTEDGLFD 487
>gi|167855157|ref|ZP_02477928.1| putative uroporphyrinogen-III synthase [Haemophilus parasuis 29755]
gi|167853702|gb|EDS24945.1| putative uroporphyrinogen-III synthase [Haemophilus parasuis 29755]
Length = 252
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 73/246 (29%), Gaps = 18/246 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M +++TRP ++ L+ E + + + PL + L+ S + S
Sbjct: 1 MNVLVTRPDQRGLQLVEMLAEQQIFAIHQPLFRVEAGADLPTLPSSLSRLNSGDYVFAVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACL------ARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + + Q S N ++ +
Sbjct: 61 KNAVDFATETLKQTGFYWRSDLLYFAVGQRSANHFASQIEQAVRYPIQSENSEGLLALPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L F + +++++CY +A E D
Sbjct: 121 MAQLSGKNVLILRADTGREFFAEQATSRGAEVQILECYRRIMLADNLSEQISLAKRAGTD 180
Query: 169 AILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKN--VVTVACFPKET 222
I+ + + F A + + + IA+ S + ++
Sbjct: 181 TIVVTSGEILTTFIEQTAEADLPWLYQCRLIVVGKRIATLARKSGWKSEQIQISMKADNH 240
Query: 223 SLLKLL 228
SLL+ +
Sbjct: 241 SLLETI 246
>gi|229032117|ref|ZP_04188095.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH1271]
gi|228729207|gb|EEL80205.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH1271]
Length = 250
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 77/238 (32%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL + SY + TS
Sbjct: 9 VLITRAQHQAKQMSVVVKEKSGIPLEIPLLRMEGMSDRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VTFFLDRLRKKLPVTTKIAAVGVKTRLELEKRGYEVEFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y +++ A + + L+ D I F +
Sbjct: 129 CILFPKGNLARDVIPVALREIGVSLDELIVYGTKENAEKKQELIEALEVGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ + Y + + +LL+ +
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHIIMPKEYTVEALLQCI 245
>gi|163850173|ref|YP_001638216.1| uroporphyrinogen III synthase HEM4 [Methylobacterium extorquens
PA1]
gi|163661778|gb|ABY29145.1| uroporphyrinogen III synthase HEM4 [Methylobacterium extorquens
PA1]
Length = 236
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 90/239 (37%), Gaps = 16/239 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I ++RP A RT ++ ++ + ++ P+ + + +TS+ +
Sbjct: 1 MRIWVSRPEPGASRTARRLAELSHAALVAPVLRIAPSDGP---PPTGRFDGLILTSANAA 57
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ L A P+FA+G +A A + G + ++++LA+++ P L+
Sbjct: 58 APLAAAGLPEAPVFAVGTRTAERAERAGLRSVHCADGDAVSLARLVAAHV---RPGGTLL 114
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-----AILFYAR 175
+ G+ R L + Y + A + L D A L ++R
Sbjct: 115 HAAGEDRKAEPAASLTAAGYGVTTWTAYAALAEATLPEPVVQGLMGRDGAPLAAALHFSR 174
Query: 176 SSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S L A + AF CLS ++A + VA P E +LL L
Sbjct: 175 RSAEIAVHLSGKAGLGGAFRALAHYCLSPDVALGLVELGVAAHFVAARPSEEALLAGLA 233
>gi|160871917|ref|ZP_02062049.1| uroporphyrinogen-III synthase [Rickettsiella grylli]
gi|159120716|gb|EDP46054.1| uroporphyrinogen-III synthase [Rickettsiella grylli]
Length = 262
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 71/242 (29%), Gaps = 16/242 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
++ITRP+ + +IQ G V P + L Y + S
Sbjct: 8 RVLITRPLHQTSELTTQIQNCGGFVVHFPTLEINQVPNIKKINSELKKLNHYHFVIFISP 67
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLA------RQKGFTQIFHGKDNSINLAKIIVEQKV 111
S+ + P + + ++ + + II +
Sbjct: 68 NSVFNTAPSIHAIWPHWPCSTKTIATGLGTVSALKQHHLPSHFHPEKNYTGMGIINLSIL 127
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
K ++ + G+ + L + + Y Q + E ++ D I+
Sbjct: 128 QTIKGKKILIIKGQGGRLNLIKNLKTRGASVNNLVVYKRQ-LPAIEKQCIPNQEDIDVII 186
Query: 172 FYARSSVLYFFSLPLPAKISAAF----LCLSNNIASAIPASYKNVV-TVACFPKETSLLK 226
+ + + +L P S F L +S +A + +A ++L
Sbjct: 187 CTSGTGLKNLVTLLHPRWESHLFKKQMLVISPRLAVIAKKLGFVKLPLIADNASHDAILH 246
Query: 227 LL 228
L
Sbjct: 247 TL 248
>gi|261493198|ref|ZP_05989726.1| uroporphyrinogen-III synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495983|ref|ZP_05992398.1| uroporphyrinogen-III synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308359|gb|EEY09647.1| uroporphyrinogen-III synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311146|gb|EEY12321.1| uroporphyrinogen-III synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 254
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 77/247 (31%), Gaps = 20/247 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M +++TRP + + + + + PL +E ++ +S + + S
Sbjct: 1 MNVLVTRPDSRGQELVDMLNEQQIFAIHQPLFTIEAGKELPLLPSAISRLKSDDYVFVVS 60
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ +F FA+G+ +A +K + + N ++
Sbjct: 61 PNAVDYAAKTLVDTGFHFRSDLKYFAVGQRTAKYLTEKAEQAVIYP-IEFENSEGVLALP 119
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP-ETTMKNLLQ-NA 167
++ K ++ L + + ++ ++CY + + + +
Sbjct: 120 EMQNLTDKTILILRADSGRELLAETAVLRGATIQYLECYRREPVTDDIPEKISLCKRLGV 179
Query: 168 DAILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKN--VVTVACFPKE 221
D I+ + + + + +S IA + V+
Sbjct: 180 DTIVITSSEILRSLYEQAKADCRAWLFECDLVVVSRRIAKIAKQMGWQEDKIRVSDKADN 239
Query: 222 TSLLKLL 228
+L+ L
Sbjct: 240 VTLMNTL 246
>gi|120553423|ref|YP_957774.1| uroporphyrinogen III synthase HEM4 [Marinobacter aquaeolei VT8]
gi|120323272|gb|ABM17587.1| Uroporphyrinogen III synthase HEM4 [Marinobacter aquaeolei VT8]
Length = 270
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 75/240 (31%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
++I RP +A R E +K G +MP+ E+ L ++ I S
Sbjct: 18 RVLICRPEPEASRLAEAFRKAGADARVMPMMAREPLPETPEQRGILQQLDNFSHIIAVSP 77
Query: 58 ESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ L P + +G +A + R+ G + + ++
Sbjct: 78 YAARRLMEEIDHWWPQLPAGLQWYGVGAGTAAVFREHGLKPRMPAEGWTS--EALLALPS 135
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-- 168
+ + ++ G+ + L + + + Y Y +K L+ +
Sbjct: 136 LQRVDGEKVLLARGEHGRELIRETLAQRGARITTLPLYRRVLPYYSAKQVKALVADFHPE 195
Query: 169 AILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ + ++ L +++ + + +A A V + L+
Sbjct: 196 VVIALSGETLNNLVELGHRYQLALTPDIIVVPAERVAEQARALGFRKPLVPGSLNDDDLV 255
Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 14/130 (10%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT--MKNLLQN 166
Q+ + ++ +P + + RV+ + + + L N
Sbjct: 9 QQPSELQGRRVLICRPEPEASRLAEAFRKAGADARVMPMMAREPLPETPEQRGILQQLDN 68
Query: 167 ADAILFYARSSVLYFFSLPLPAKISAAF----LCLSNNIASAIPASYKNVVTVACFPKET 222
I+ + + + A+ A
Sbjct: 69 FSHIIAVSPYAARRLMEEIDHWWPQLPAGLQWYGVGAGTAAVFREHGLKPRMPAEGWTSE 128
Query: 223 SLLKLLPLRR 232
+LL L L+R
Sbjct: 129 ALLALPSLQR 138
>gi|217969859|ref|YP_002355093.1| uroporphyrinogen III synthase HEM4 [Thauera sp. MZ1T]
gi|217507186|gb|ACK54197.1| Uroporphyrinogen III synthase HEM4 [Thauera sp. MZ1T]
Length = 267
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 59/244 (24%), Gaps = 18/244 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
+V+ RP ++A +++ G + P+ + L + S
Sbjct: 21 LVVMRPREQAESLCARLEAAGGRALRFPVIAVGPALDPAPLQAIVGRLDEFDLAFFVSPN 80
Query: 59 SLSTLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIV--EQKV 111
++ A + Q + + +I E
Sbjct: 81 AVDHAMRAILPQRTWPARLRVATVGKGSQRVMQDWGFANVIAPQDGFDSEAVIALPEFAA 140
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK--NLLQNADA 169
+ ++ G D L E + + CY + D
Sbjct: 141 DAVRGRKVLIFRGDGGRELLADTLRERGASVEYVTCYRRHCPEADPALLLGPAARGELDG 200
Query: 170 ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+L + V + + + I + A+ V + L+
Sbjct: 201 LLLTSSEGVRNLEWMLGTEGLAALHAVTVFATHPRIVAQARAAGFERVVETP-AGDDGLM 259
Query: 226 KLLP 229
+ L
Sbjct: 260 QALE 263
>gi|150403312|ref|YP_001330606.1| uroporphyrinogen III synthase HEM4 [Methanococcus maripaludis C7]
gi|150034342|gb|ABR66455.1| Uroporphyrinogen III synthase HEM4 [Methanococcus maripaludis C7]
Length = 244
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 26/248 (10%), Positives = 68/248 (27%), Gaps = 27/248 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +VITRP++K ++ G+ V++P + + Y I TS +
Sbjct: 1 MKVVITRPLEKGKDFSRMLEDAGFETVVIPTLELVF---KKAEINLEKYSWIVFTSPRGI 57
Query: 61 STLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
N + + +K F + ++ K
Sbjct: 58 EGFFKNLISKDIEKVLTKKIGAIGIETAKEFEKIFEKPVDVIPELYTAEHLLEALKKEVK 117
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---------LLQ 165
+ ++ +++ + +I Y S++ ++
Sbjct: 118 TGEKVLVPTTPSTRD-----VLKEGLNADLIFVYSSEEPENISEKLEELEKQVVSENKNN 172
Query: 166 NADAILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + + FF P + + + + + + +
Sbjct: 173 KKVILTFTSGLTAKNFFKHCTPEFLEVLKEQYIISIGPITKKNVDSFGFDSLMPEKNYTV 232
Query: 222 TSLLKLLP 229
+L ++
Sbjct: 233 EGMLSIIK 240
Score = 39.0 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 29/118 (24%), Gaps = 10/118 (8%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + F L + VI L+ I+F +
Sbjct: 2 KVVITRPLEKGKDFSRMLEDAGFETVVIPTLELVFKKAEIN-----LEKYSWIVFTSPRG 56
Query: 178 VLYFF-SLPLPAKISA---AFLCLSNNIASAIPASY-KNVVTVACFPKETSLLKLLPL 230
+ FF +L + A + K V + LL+ L
Sbjct: 57 IEGFFKNLISKDIEKVLTKKIGAIGIETAKEFEKIFEKPVDVIPELYTAEHLLEALKK 114
>gi|30022551|ref|NP_834182.1| uroporphyrinogen-III synthase [Bacillus cereus ATCC 14579]
gi|229048180|ref|ZP_04193749.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH676]
gi|229129755|ref|ZP_04258722.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus BDRD-Cer4]
gi|229152665|ref|ZP_04280853.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus m1550]
gi|296504954|ref|YP_003666654.1| uroporphyrinogen-III synthase [Bacillus thuringiensis BMB171]
gi|29898109|gb|AAP11383.1| Uroporphyrinogen-III synthase [Bacillus cereus ATCC 14579]
gi|228630811|gb|EEK87452.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus m1550]
gi|228653671|gb|EEL09542.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus BDRD-Cer4]
gi|228723167|gb|EEL74543.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus AH676]
gi|296326006|gb|ADH08934.1| uroporphyrinogen-III synthase [Bacillus thuringiensis BMB171]
Length = 250
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 73/236 (30%), Gaps = 13/236 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLKKKLPLTIRIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPSVIVPKEYTVEALLQ 243
>gi|73667163|ref|YP_303179.1| uroporphyrinogen III synthase HEM4 [Ehrlichia canis str. Jake]
gi|72394304|gb|AAZ68581.1| Uroporphyrinogen III synthase HEM4 [Ehrlichia canis str. Jake]
Length = 240
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 83/238 (34%), Gaps = 18/238 (7%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP K +++ +E + K+G+ + P+ + + L + + I TS S
Sbjct: 6 MKSLLVTRPEKDSIKIKESLNKLGFNVYIEPMFSIKYLTAKITL---KDFDLIICTSQHS 62
Query: 60 LSTLPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ L R I +G + +A++ GFT + N ++ +
Sbjct: 63 IIALSKITKNRDITIITVGNNTMHIAQELGFTFVKSLNGNINDVVSYLQNYSKSN----- 117
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
I + H + I Y + D + + +L Y+
Sbjct: 118 -ILYIRGKEVTYNLKKTFNHYKNFQEIILYNTIDRTHFSKCCYSAFLGNKISGVLLYSSR 176
Query: 177 SVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ L I + +SN IA+ + + ++ P SLL L+
Sbjct: 177 TAEILIELIKKYNIQDKISNITAYTMSNKIANTAKNVHWKTIKISDQPTNESLLSLIS 234
>gi|187778037|ref|ZP_02994510.1| hypothetical protein CLOSPO_01629 [Clostridium sporogenes ATCC
15579]
gi|187774965|gb|EDU38767.1| hypothetical protein CLOSPO_01629 [Clostridium sporogenes ATCC
15579]
Length = 486
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 33/236 (13%), Positives = 72/236 (30%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++A + ++ +G + + +++ L+ + Y IA+TS +
Sbjct: 251 NICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNTEDNLKSYLSKLKEYDYIALTSVNA 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLA------RQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ L R A + + K + E +
Sbjct: 311 VKILFDYLIRENIDIRNINAKFAAIGPATSEAIRMRGIMPSVKSKHFVAESLFEEMRKHI 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++ K D L + + + Y + T +NAD +LF
Sbjct: 371 QKGDKILVPRSKDARPFLVDALRKEGCIVDEVHIYETLCGQC---TYTERFENADTVLFT 427
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V S+ I + + A + + ++ ++ L
Sbjct: 428 SPSTVRNMISMVDIDSIKEKDIIAIGPITAKELDKNNIKC-SICDEYSINGIIDKL 482
>gi|52141042|ref|YP_085786.1| uroporphyrinogen-III synthase [Bacillus cereus E33L]
gi|51974511|gb|AAU16061.1| uroporphyrinogen-III synthase [Bacillus cereus E33L]
Length = 250
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 75/237 (31%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
+++TR +A + +++M IP+ +PL SY + TS
Sbjct: 9 VLVTRAQHQAKQMSVAVKEMSGIPLEIPLLRMEGMSHRQIQHIAEQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDCLRQKLPVTTKIAAVGVKTKLELEKRGYEVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y +++ + + L+ D I F +
Sbjct: 129 CILFPKGNLARDVIPVALREIGVSLDELIVYGTKENVEKKQELIEALEVGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y + + +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHIIMPKEYTVEALLQC 244
>gi|228923216|ref|ZP_04086506.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836422|gb|EEM81773.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 250
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 73/236 (30%), Gaps = 13/236 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIKEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLKKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPSVIVPKEYTVEALLQ 243
>gi|23015542|ref|ZP_00055315.1| COG1587: Uroporphyrinogen-III synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 240
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 88/236 (37%), Gaps = 12/236 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++TRP + + + + G ++ PL + + I +TS+ +
Sbjct: 1 MRALVTRPKEDSEGVARALGQRGLDVMIEPLLDIAAVED--AQVETEGAQGILVTSANGI 58
Query: 61 STLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
L R ++A+G++SA AR+ GF+ + + +LA+++ + + L
Sbjct: 59 RALARLCPRRDLAVWAVGDSSARAAREMGFSAVESAGGDVDSLAELVAAR--VNPQSGAL 116
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LFYARSS 177
++ G L +R Y + + L + LF++ +
Sbjct: 117 LHAAGTVVAGDLSGRLEAKGFQVRRQVLYQAVTATRLSDGLCRALVDGTIHLALFFSPRT 176
Query: 178 VLYFFSL-----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F +L + A LS N+++ + V+ A P + +LL +
Sbjct: 177 AKTFATLAVEAGVQDQLRTIAAYGLSANVSAELARVPWRVLRQAFEPTQAALLAAI 232
>gi|219871197|ref|YP_002475572.1| uroporphyrinogen-III synthase [Haemophilus parasuis SH0165]
gi|219691401|gb|ACL32624.1| uroporphyrinogen-III synthase [Haemophilus parasuis SH0165]
Length = 252
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 73/246 (29%), Gaps = 18/246 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M +++TRP ++ L+ E + + + PL + L+ S + S
Sbjct: 1 MNVLVTRPDQRGLQLVEMLAEQQIFAIHQPLFRVEAGADLPTLPSSLSRLNSGDYVFAVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACL------ARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + + Q S N ++ +
Sbjct: 61 KNAVDFATETLKQTGFYWRSDLLYFAVGQRSANHFASQIEQAVRYPIQSENSEGLLALPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L F + +++++CY +A E D
Sbjct: 121 MAQLSGKNVLILRADTGREFFAEQATSRGAEVQILECYRRIMLADNLSEQISLAKRAGTD 180
Query: 169 AILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKN--VVTVACFPKET 222
I+ + + F A + + + IA+ S + ++
Sbjct: 181 TIVVTSGEILTTFIEQTAEADLPWLYQCRLIVVGKRIATLARKSGWKSEQIQISMKADNH 240
Query: 223 SLLKLL 228
SLL+ +
Sbjct: 241 SLLETI 246
>gi|45357957|ref|NP_987514.1| uroporphyrinogen III synthase [Methanococcus maripaludis S2]
gi|44920714|emb|CAF29950.1| Uroporphyrinogen III synthase [Methanococcus maripaludis S2]
Length = 244
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 68/250 (27%), Gaps = 30/250 (12%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +VITRP +K ++K G+ V++P + ++Y I TS +
Sbjct: 1 MKVVITRPAEKGKDFSNLLEKNGFETVILPTLELVF---KKAQINLENYSWIVFTSPRGV 57
Query: 61 STLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
N ++ F + ++ +
Sbjct: 58 EGFFRNLKLEDAKKVLTKKIGAIGTETAKEFERTFGKAVDVIPKQYTAENLLEAIQKQVK 117
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---------LLQ 165
+ ++ +++ + ++ Y S++ +K
Sbjct: 118 NGEKVLVPTTPSTRD-----VLKEGLNADLVFVYSSEEPTDIPEKLKELEKQVISENSQD 172
Query: 166 NADAILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + + FF P + + + + + + +
Sbjct: 173 KKLILTFTSGLTAKNFFKHCSPEFLEILKKQYIVSIGPITKKNVDSFGFDSLMPEKNYTV 232
Query: 222 TSL---LKLL 228
++ +K L
Sbjct: 233 EAMVPVIKAL 242
>gi|307245919|ref|ZP_07528002.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254892|ref|ZP_07536714.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259333|ref|ZP_07541060.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853138|gb|EFM85360.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862133|gb|EFM94105.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866569|gb|EFM98430.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 254
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 69/244 (28%), Gaps = 18/244 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M ++ITRP + E + + + PL E L + + S
Sbjct: 1 MNVLITRPDYRGQELVEMLNQYQIFAIHQPLFTIEAGTELPQLPSVMSRLNTDDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + + + +S N ++ +
Sbjct: 61 KHAIDFASETLVQTGFQYRSDLKYFAVGRQSAAYFSTKTAYPTYYPISSENSEGLLELPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L + F + ++ ++CY + E D
Sbjct: 121 MQCLEGKNILVLRAEKGRDFFAEQASLRGANVQYLECYRRKYAEDNITEKMSLCKRAGID 180
Query: 169 AILFYARSSVLYF----FSLPLPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKET 222
+I+ + + L I + +S+ IA N V ++
Sbjct: 181 SIIVTSSDILTALYEQTAELDRQWLIECRLIVVSSRIAQLAYKLGWGRNKVLLSEKADNN 240
Query: 223 SLLK 226
SLL+
Sbjct: 241 SLLE 244
>gi|196034372|ref|ZP_03101781.1| uroporphyrinogen-III synthase [Bacillus cereus W]
gi|228948177|ref|ZP_04110461.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|195992914|gb|EDX56873.1| uroporphyrinogen-III synthase [Bacillus cereus W]
gi|228811535|gb|EEM57872.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 250
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 73/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A+ E+ + +
Sbjct: 69 VAFFLDYLRKKLPVTTKIAAVGVKTKLELEKRGYHVDFVPTSFVAEAFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y +++ + + L+ D I F +
Sbjct: 129 RILFPKGNLARDVIPVALREMGVSLDELIVYGTKENVEKKWELIEALKVGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V + +LL+
Sbjct: 189 STVTSFVRLLDGTNWREWTKKCTIACIGPITEKEA-SLYFPHVIMPKEYTVEALLQC 244
>gi|239833010|ref|ZP_04681339.1| uroporphyrinogen-III synthase [Ochrobactrum intermedium LMG 3301]
gi|239825277|gb|EEQ96845.1| uroporphyrinogen-III synthase [Ochrobactrum intermedium LMG 3301]
Length = 244
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 15/238 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP T ++ GY PV++PLS I F + + A+ +TS+ +
Sbjct: 12 RVLVTRPQPAGSETAARLVSGGYEPVLLPLSRTIALS---FAFPEGPFAALTVTSANAFR 68
Query: 62 TLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
L + P+FA+G+ +A AR+ GF + G +++ LA + Q
Sbjct: 69 HLDMERLKLFLGLPLFAVGQGTAQAARKAGFGHVIDGGGDAVRLAATMQR---ELPAQAR 125
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARS 176
++YL G+ R FED + K+ + +D Y ++ IAY ++N L A++ Y+
Sbjct: 126 ILYLAGRVRQPVFEDEMKAAKLDMHAVDVYDTEAIAYTSAALRNALGDTPFAAVMLYSGV 185
Query: 177 SVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ + P FLC+S +A +P ++ VA P E L +L
Sbjct: 186 AATSLVAAMREIEPPFDEKTRFLCISARVAGRLPPVWRANALVADHPDEEGLFRLFAK 243
>gi|228954746|ref|ZP_04116768.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228804944|gb|EEM51541.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 250
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 73/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFIDSLKKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E I L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGISLDELTVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLKGTNWREWTKKCTIACIGPITEKEA-SLYFPSVIVPKEYTVEALLQC 244
>gi|190150335|ref|YP_001968860.1| uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303251058|ref|ZP_07337244.1| putative uroporphyrinogen-III synthase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307252645|ref|ZP_07534538.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307261493|ref|ZP_07543162.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307263676|ref|ZP_07545285.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915466|gb|ACE61718.1| putative uroporphyrinogen-III synthase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302650068|gb|EFL80238.1| putative uroporphyrinogen-III synthase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306859890|gb|EFM91910.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306868776|gb|EFN00584.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306870989|gb|EFN02724.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 254
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 69/244 (28%), Gaps = 18/244 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M ++ITRP + E + + + PL E L + + S
Sbjct: 1 MNVLITRPDYRGQELVEMLNQYQIFAIHQPLFTIEAGTELPQLPSVMSRLNTDDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + + + +S N ++ +
Sbjct: 61 KHAIDFASETLVQTGFQYRSDLKYFAVGRQSAAYFSTKTAYPTYYPISSENSEGLLELPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L + F + ++ ++CY + E D
Sbjct: 121 MQCLEGKNILVLRAEKGRDFFAEQASLRGANVQYLECYRRKYAEDNITEKMSLCKRAGID 180
Query: 169 AILFYARSSVLYF----FSLPLPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKET 222
+I+ + + L I + +S+ IA N V ++
Sbjct: 181 SIIVTSSDILAALYEQTAELDRQWLIECRLIVVSSRIAQLAYKLGWGRNKVLLSEKADNN 240
Query: 223 SLLK 226
SLL+
Sbjct: 241 SLLE 244
>gi|229180739|ref|ZP_04308077.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus 172560W]
gi|228602717|gb|EEK60200.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus 172560W]
Length = 250
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLKKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELTVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLKGTNWREWTKKCTIACIGPITEKEA-SLYFPSVIVPKEYTVEALLQC 244
>gi|307257055|ref|ZP_07538830.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864426|gb|EFM96334.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 254
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 69/244 (28%), Gaps = 18/244 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M ++ITRP + E + + + PL E L + + S
Sbjct: 1 MNVLITRPDYRGQELVEMLNQYQIFAIHQPLFTIEAGTELPQLPSVMSRLNTGDYVFAVS 60
Query: 57 SESLSTLPA------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + + + +S N ++ +
Sbjct: 61 KHAIDFASETLIQTGFHYRTDLKYFAVGRHSAAYFSAKTENPTYYPISSENSEGLLELPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L + F + ++ ++CY + E D
Sbjct: 121 MQCLEGKNILVLRAEKGRDFFAEQASLRGANVQYLECYRRKYAEDNITEKMSLCKRAGID 180
Query: 169 AILFYARSSVLYF----FSLPLPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKET 222
+I+ + + L I + +S+ IA N V ++
Sbjct: 181 SIIVTSSDILTALYEQTAELDRQWLIECHLIVVSSRIAQLAYKLGWSRNKVLLSEKADNN 240
Query: 223 SLLK 226
SLL+
Sbjct: 241 SLLE 244
>gi|295675859|ref|YP_003604383.1| protein of unknown function DUF513 hemX [Burkholderia sp. CCGE1002]
gi|295435702|gb|ADG14872.1| protein of unknown function DUF513 hemX [Burkholderia sp. CCGE1002]
Length = 663
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 66/253 (26%), Gaps = 34/253 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+VITRP ++ E+++ G + PL + LA + Y + S
Sbjct: 13 VVITRPAGQSSELVERLEAAGLTSLDFPLIDIAPVIDDAPLCAALASLERYALVVFVSPN 72
Query: 59 SLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSIN----- 101
++ A P + A+ + + D S +
Sbjct: 73 AVDHAFARHHDIWPHALPVGVVGPGSVHALARHGVSAPEHRVISPAAGADDESTSFDSEG 132
Query: 102 -LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPETT 159
A I + K ++ + G + L E + + Y
Sbjct: 133 LFAAIEAQFGAAGLEGKRVLIVRGDGGREWLSERLREAGAEVDTVAAYRRIVPEPSIGAW 192
Query: 160 MKNL---LQNADAILFYARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPAS 208
+ A L + V L A + IA A
Sbjct: 193 ARVHELLAGAPHAWLLTSSEGVRNLQELAHEHLTADEIEQLKHAPLVTPHPRIAQTARAL 252
Query: 209 YKNVVTVACFPKE 221
+ +TV+ E
Sbjct: 253 GFDRITVSGAGDE 265
>gi|326488831|dbj|BAJ98027.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518722|dbj|BAJ92522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 79/246 (32%), Gaps = 16/246 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
+V+TR K + ++K + +PL + ++ L + + I +TS E+
Sbjct: 50 VVVTRERGKNAKLVASLEKHNVHSLELPLIQHVQGPDADRLSAVLRDEKFDWITVTSPEA 109
Query: 60 LSTLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK----IIVEQKV 111
+ + I +G +A + + + + E
Sbjct: 110 AAVFLEGWKAAGNPKVRIAVVGAGTARTFDEVLQSNDGSLEVAFSPSKALGKVLASELPR 169
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++Y ++ L + ++ Y + + + + NL +A +
Sbjct: 170 TSETACKVLYPASAKAGHEIQNGLSARGFEVTRLNTYSTVPVQDVDPQILNLALSAPVVA 229
Query: 172 FYARSSVLYFFSLP-LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK----ETSLLK 226
+ S++ + +L S + C+ ASA + P S+L+
Sbjct: 230 VASPSALRAWLNLTSRVDDWSNSVACIGETTASAAKKLGLESIYYPATPGLEGWVESILE 289
Query: 227 LLPLRR 232
L +
Sbjct: 290 ALRAHK 295
>gi|229163419|ref|ZP_04291370.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus R309803]
gi|228619988|gb|EEK76863.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus R309803]
Length = 250
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 73/238 (30%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSSRQIQHIAKQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + + P A + + +A++ E+ +
Sbjct: 69 VAFFLDSLKKKLPATIKIAAVGVKTKLELEKRGYEVDFVPTSFVAEVFAEEFVKRLIGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y +++ + + L+ D I F +
Sbjct: 129 CILFPKGNLARDVIPVALREIGVSLDELIVYGTKENVEKKQELIEALEVGKVDVITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ Y V V +LL+ +
Sbjct: 189 STVTSFVRLLEGANWREWTKKCTIACIGPITEKEAI-LYFPHVIVPKEYTVEALLQCI 245
>gi|85705792|ref|ZP_01036889.1| hypothetical protein ROS217_10842 [Roseovarius sp. 217]
gi|85669782|gb|EAQ24646.1| hypothetical protein ROS217_10842 [Roseovarius sp. 217]
Length = 244
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 69/229 (30%), Gaps = 11/229 (4%)
Query: 3 IVITRPIKKALRTQEKIQKM---GYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+ITRP +A R E+++++ G V+ PL + L + TS
Sbjct: 5 ILITRPEAEASRMAERLEEVLGDGVAVVVSPLLRIEY---DGALPDLSGVNVLIFTSRHG 61
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ R + A + ++ L I + Q P
Sbjct: 62 VEGFCRLSRRRDFTCYAVGDATAEAARTYGLPAISAGGDATALLARIAK----DGTQGPF 117
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSV 178
++L G L + + Y + L I+ + S
Sbjct: 118 LHLRGAHVAADVAGALGAAGHDAQDVVVYDQVEATLSAQARNVLRGAGVVIVPLMSPRSA 177
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
FF +S +A+A+P +V +A P +L +
Sbjct: 178 RIFFDQAGRITARLCIAAISRKVAAAVPEGAATLVDIAQTPDLPGILAV 226
>gi|15966833|ref|NP_387186.1| uroporphyrinogen-III synthase [Sinorhizobium meliloti 1021]
gi|307301661|ref|ZP_07581420.1| Uroporphyrinogen III synthase HEM4 [Sinorhizobium meliloti BL225C]
gi|307316315|ref|ZP_07595759.1| Uroporphyrinogen III synthase HEM4 [Sinorhizobium meliloti AK83]
gi|15076105|emb|CAC47659.1| Putative uroporphyrinogen-III synthase [Sinorhizobium meliloti
1021]
gi|306898155|gb|EFN28897.1| Uroporphyrinogen III synthase HEM4 [Sinorhizobium meliloti AK83]
gi|306903359|gb|EFN33948.1| Uroporphyrinogen III synthase HEM4 [Sinorhizobium meliloti BL225C]
Length = 235
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 74/240 (30%), Positives = 113/240 (47%), Gaps = 17/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A RT ++ MG+ V++PL H + A+ + + AIA++S E++
Sbjct: 1 MRVLVTRPRPAAERTAARLSAMGHEAVILPLMQAQHLAGAARAALSEPHQAIAVSSGEAV 60
Query: 61 STLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L A TP+FA+GEA+A A GFT + G LA+ + L P
Sbjct: 61 RVLGALGPALEPHLATPLFAVGEATARAAGDLGFTDVRIGPGTGEGLAETVA---ALLPP 117
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILFY 173
+ L+YL G PR FE L + +I R +CY + YP T+ DA++ Y
Sbjct: 118 GETLVYLAGSPRTDGFERALHQRRIEHRTAECYRMAPVHYPAETLPGLLRAGPFDAVMLY 177
Query: 174 ARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R S + + + + FLCLS I +P VA P E +LL+LL
Sbjct: 178 SRESARRLDAALRESGLEPADLASRFLCLSWPIRETLPDGL--PCGVAAVPDEENLLRLL 235
>gi|197364722|ref|YP_002144359.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197096199|emb|CAR61795.1| uroporphyrinogen III synthase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 231
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 67/231 (29%), Gaps = 17/231 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
+++ +G + PL F+ RE + LA + S +++ A R
Sbjct: 1 MSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALSQHAVAFAHAQLQRDG 60
Query: 72 PIFAIGEA------SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ + LA + ++ ++ K + L G
Sbjct: 61 RNWPASPRYFAIGRTTALALHTVSGFDIRYPLDREISEALLQLPELQNIAGKRALILRGN 120
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFS 183
+ L + +CY Y E M+ + ++ + + +S
Sbjct: 121 GGRELLGETLTARGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVTTLVVTSGEMLQRLWS 180
Query: 184 LPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L + L +S +A + VA +LL+ L
Sbjct: 181 LTPEWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDALLRALQ 231
>gi|206969556|ref|ZP_03230510.1| uroporphyrinogen-III synthase [Bacillus cereus AH1134]
gi|229192674|ref|ZP_04319633.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus ATCC 10876]
gi|206735244|gb|EDZ52412.1| uroporphyrinogen-III synthase [Bacillus cereus AH1134]
gi|228590764|gb|EEK48624.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus ATCC 10876]
Length = 250
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 73/236 (30%), Gaps = 13/236 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLKKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELTVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPSVIVPKEYTVEALLQ 243
>gi|255102623|ref|ZP_05331600.1| porphyrin biosynthesis protein [Clostridium difficile QCD-63q42]
gi|255308449|ref|ZP_05352620.1| porphyrin biosynthesis protein [Clostridium difficile ATCC 43255]
gi|328887812|emb|CAJ70323.2| Bifunctional uroporphyrinogen-III
methyltransferase/uroporphyrinogen-III synthase
[Clostridium difficile]
Length = 499
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I +TR + EKI +G P+ +P + ++ L Y + +TS
Sbjct: 255 IAVTRSRNQNSVLVEKIMDLGGNPIEIPTIKVEKIQNNINLENEIKNINKYNYLILTSKN 314
Query: 59 SLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ + AIG A++ +++G K +A+ + E+
Sbjct: 315 AVEIFFEKIYEMNFDLRILSNLKVCAIGSATSNELKKRGIIADIVPKK---FVAESLYEE 371
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
I + + ++ + + Y + + + ++L + D
Sbjct: 372 LAPILNDDDNILIPRAENARDYLVDKLKAICEVTEVHIYRTVIDEEKKGEILDILNSNDI 431
Query: 170 --ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V + I L + I + + + S
Sbjct: 432 DYITFTSSSTVNNLVEIIGKENIKILEKIKTLSIGPITTETINSLGIKLYKESATSTIDS 491
Query: 224 LLKLLPL 230
L+ L+
Sbjct: 492 LVDLIIK 498
>gi|126701043|ref|YP_001089940.1| porphyrin biosynthesis protein [Clostridium difficile 630]
Length = 502
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I +TR + EKI +G P+ +P + ++ L Y + +TS
Sbjct: 258 IAVTRSRNQNSVLVEKIMDLGGNPIEIPTIKVEKIQNNINLENEIKNINKYNYLILTSKN 317
Query: 59 SLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ + AIG A++ +++G K +A+ + E+
Sbjct: 318 AVEIFFEKIYEMNFDLRILSNLKVCAIGSATSNELKKRGIIADIVPKK---FVAESLYEE 374
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
I + + ++ + + Y + + + ++L + D
Sbjct: 375 LAPILNDDDNILIPRAENARDYLVDKLKAICEVTEVHIYRTVIDEEKKGEILDILNSNDI 434
Query: 170 --ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V + I L + I + + + S
Sbjct: 435 DYITFTSSSTVNNLVEIIGKENIKILEKIKTLSIGPITTETINSLGIKLYKESATSTIDS 494
Query: 224 LLKLLPL 230
L+ L+
Sbjct: 495 LVDLIIK 501
>gi|228987715|ref|ZP_04147826.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228771989|gb|EEM20444.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 250
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 76/238 (31%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSES 59
+++TR +A + +++M IP+ +PL + SY + TS
Sbjct: 9 VLVTRAQHQAKQMSVAVKEMSGIPLEIPLLRMEGMSHTQIQHIAEQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLNRLRQKLPVTTKIAAVGVKTKLELEKRGYEVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y +++ + + L D I F +
Sbjct: 129 CILFPKGNLARDVIPVALREIGVSLDELIVYGTKENVEKKRELIEALELGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ + Y + + +LL+ +
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHIIMPKEYTVEALLQCI 245
>gi|188579974|ref|YP_001923419.1| uroporphyrinogen III synthase HEM4 [Methylobacterium populi BJ001]
gi|179343472|gb|ACB78884.1| uroporphyrinogen III synthase HEM4 [Methylobacterium populi BJ001]
Length = 242
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 90/240 (37%), Gaps = 17/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I ++RP A RT ++ + G+ ++ P+ + + +TS+ +
Sbjct: 6 MRIWVSRPEPGAGRTARRLAERGHAALVAPVLRIAPSDGP---PPAGPFDGLILTSANAA 62
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ L P+FA+G +A A + G + ++ +LA+++ P L+
Sbjct: 63 APLAGAGLPAAPVFAVGARTAERAARAGLHPVLCADGDAADLARLVAAHV---RPGGVLL 119
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD------AILFYA 174
+ G+ R L + Y + L++ D A L ++
Sbjct: 120 HAAGEDRKAEPAARLTAEGYRVTTWTAYAALAETALPEAAARALRDRDGAPPLTAALHFS 179
Query: 175 RSSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
R S L A +S AF CLS ++A+ + VA P E +LL L
Sbjct: 180 RRSAEIAAHLCREAGLSGAFRALAHYCLSADVAAGLVELGVAAHFVAARPSEEALLAGLA 239
>gi|254977042|ref|ZP_05273514.1| porphyrin biosynthesis protein [Clostridium difficile QCD-66c26]
gi|255094369|ref|ZP_05323847.1| porphyrin biosynthesis protein [Clostridium difficile CIP 107932]
gi|255316122|ref|ZP_05357705.1| porphyrin biosynthesis protein [Clostridium difficile QCD-76w55]
gi|255518783|ref|ZP_05386459.1| porphyrin biosynthesis protein [Clostridium difficile QCD-97b34]
gi|255651961|ref|ZP_05398863.1| porphyrin biosynthesis protein [Clostridium difficile QCD-37x79]
gi|260684925|ref|YP_003216210.1| porphyrin biosynthesis protein [Clostridium difficile CD196]
gi|260688583|ref|YP_003219717.1| bifunctional uroporphyrinogen-III
methyltransferase/uroporphyrinogen-III synthase
[Clostridium difficile R20291]
gi|306521709|ref|ZP_07408056.1| porphyrin biosynthesis protein includes: uroporphyrinogen-III
methyltransferase and uroporphyrinogen-III synthase]
[Clostridium difficile QCD-32g58]
gi|260211088|emb|CBA66472.1| porphyrin biosynthesis protein [Clostridium difficile CD196]
gi|260214600|emb|CBE07177.1| porphyrin biosynthesis protein includes: uroporphyrinogen-III
methyltransferase and uroporphyrinogen-III synthase]
[Clostridium difficile R20291]
Length = 499
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
I +TR + EKI +G P+ +P + ++ L Y + +TS
Sbjct: 255 IAVTRSRNQNSVLVEKIMDLGGNPIEIPTIKVEKIQNNINLENEIKNINKYNYLILTSKN 314
Query: 59 SLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ + AIG A++ +++G K +A+ + E+
Sbjct: 315 AVEIFFEKIYEMNFDLRILSNLKVCAIGSATSNELKKRGIIADIVPKK---FVAESLYEE 371
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
I + + ++ + + Y + + + ++L + D
Sbjct: 372 LAPILNDNDNILIPRAENARDYLVDKLKAICEVTEVHIYRTVIDEDKKGEILDILNSNDI 431
Query: 170 --ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V + I L + I + + + S
Sbjct: 432 DYITFTSSSTVNNLVEIIGKENIKILEKIKTLSIGPITTETINSLGIKLYKESATSTIDS 491
Query: 224 LLKLLPL 230
L+ L+
Sbjct: 492 LVDLIIK 498
>gi|187934684|ref|YP_001887093.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum B str. Eklund 17B]
gi|187722837|gb|ACD24058.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum B str. Eklund 17B]
Length = 491
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 62/233 (26%), Gaps = 13/233 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR K+A ++K++ MG + ++ + ++Y I TS S
Sbjct: 251 NICVTRSQKQAATLKQKLRDMGAEVTALSAIEIESTASNLDSYMGDLENYDHIVFTSVNS 310
Query: 60 LSTLPANF----CRHTPIFAIGEASACLARQ--KGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A A Q + I K A +I K
Sbjct: 311 VDIFFDYLIENKYDIRKLQAKVSAIGKATWQALERRGIICFVKAREFIGAGLIKVLKPHV 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ D L + + Y + K D + F
Sbjct: 371 KENEKVLIPCSSLAKSDIADELSNVGANVDRVFIYDTVK---GRVRNKRAFDEVDIVFFT 427
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ S+V + I + + + + + L
Sbjct: 428 SPSTVYNMIDMVGLDAIKEKQVIAIGTRTNKPLEELGIKA-YICKEHSQDGFL 479
>gi|307250257|ref|ZP_07532211.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306857698|gb|EFM89800.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 254
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 69/244 (28%), Gaps = 18/244 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M ++ITRP + E + + + PL E L + + S
Sbjct: 1 MNVLITRPDYRGQELVEMLNQYQIFAIHQPLFTIEAGTELPQLPSVMSRLNTGDYVFAVS 60
Query: 57 SESLSTLPA------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + + + +S N ++ +
Sbjct: 61 KHAIDFASETLIQTGFHYRTDLKYFAVGRHSAAYFSAKTENPTYYPISSENSEGLLELPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L + F + ++ ++CY + E D
Sbjct: 121 MQCLEGKNILVLRAEKGRDFFAEQASLRGANVQYLECYRHKYAEDNITEKMSLCKRAGID 180
Query: 169 AILFYARSSVLYF----FSLPLPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKET 222
+I+ + + L I + +S+ IA N V ++
Sbjct: 181 SIIVTSSDILTALYEQTAELDRQWLIECHLIVVSSRIAQLAYKLGWSRNKVLLSEKADNN 240
Query: 223 SLLK 226
SLL+
Sbjct: 241 SLLE 244
>gi|42783600|ref|NP_980847.1| uroporphyrinogen-III synthase [Bacillus cereus ATCC 10987]
gi|42739529|gb|AAS43455.1| uroporphyrinogen-III synthase [Bacillus cereus ATCC 10987]
Length = 250
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 74/237 (31%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
+++TR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLVTRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDRLRQKLPVTTKIAAVGVKTKLELEKRGYEVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y +++ + + L+ D I F +
Sbjct: 129 CILFPKGNLARDVIPVALREMGVSLDELIVYGTKENVEKKQELIEALEVGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y + + +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHIIMPKEYTVEALLQC 244
>gi|127511251|ref|YP_001092448.1| uroporphyrinogen III synthase HEM4 [Shewanella loihica PV-4]
gi|126636546|gb|ABO22189.1| Uroporphyrinogen III synthase HEM4 [Shewanella loihica PV-4]
Length = 243
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 65/242 (26%), Gaps = 11/242 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD---RESVFLAMQQSYGAIAITSS 57
M +++TRP + E + + + PL + + + I S+
Sbjct: 1 MKLLLTRPEGRNQSMAEALSQRDVPFTIAPLLAVVANNEADHEHKKKLFYQSDIIIFIST 60
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLAR---QKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ P A + F ++ ++ ++
Sbjct: 61 NAVEYADIALSSAWPKDKQYFAVGQATYCALKDKGIVAFEAPESCQQTEGLLTLAQLQAI 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFY 173
+ + + G L + + + Y T + D I+
Sbjct: 121 TGQQITIVRGVGGRETLASELADRGAKVDYWEVYRRACPQLDPHTPYEWREQAIDTIVIT 180
Query: 174 ARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + +L + + S + A+ VT A ++L L
Sbjct: 181 SGEILANLITLVPKELFAWLHACHIIVPSARVYDQAIAAGFTRVTNAKAANRDAVLTALG 240
Query: 230 LR 231
L+
Sbjct: 241 LQ 242
>gi|188590257|ref|YP_001922028.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum E3 str. Alaska E43]
gi|188500538|gb|ACD53674.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum E3 str. Alaska E43]
Length = 491
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 62/233 (26%), Gaps = 13/233 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR K+A ++K++ MG + ++ + ++Y I TS S
Sbjct: 251 NICVTRSQKQAATLKQKLRDMGAEVTALSAIEIESTANNLDSYMGDLENYDHIVFTSVNS 310
Query: 60 LSTLPANF----CRHTPIFAIGEASACLARQ--KGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A A Q + I K A +I K
Sbjct: 311 VDIFFDYLIENKYDIRKLQAKVSAIGKATWQALERRGIICFVKAREFIGAGLIKVLKPHV 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ D L + + Y + K D + F
Sbjct: 371 KENEKVLIPCSSLAKSDIADELSNVGANVDRVFIYDTVK---GRVRNKRAFDEVDIVFFT 427
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ S+V + I + + + + + L
Sbjct: 428 SPSTVYNMIDMVGLDAIKEKQVIAIGTRTNKPLEELGIKA-YICKEHSQDGFL 479
>gi|229124003|ref|ZP_04253195.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus 95/8201]
gi|228659305|gb|EEL14953.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus 95/8201]
Length = 250
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI---HDRESVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL H + SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMFHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A+ E+ + +
Sbjct: 69 VAFFLDCLGKKLPVTTKIAAVGVKTKLELEKRGYHVDFVPTSFVAEAFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNVEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V + +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHVIMPKEYTVEALLQC 244
>gi|313905567|ref|ZP_07838930.1| uroporphyrin-III C-methyltransferase [Eubacterium cellulosolvens 6]
gi|313469630|gb|EFR64969.1| uroporphyrin-III C-methyltransferase [Eubacterium cellulosolvens 6]
Length = 505
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 79/245 (32%), Gaps = 21/245 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
I++TRP ++ + ++ + +G V P + ++ + + Y + TS
Sbjct: 255 RILLTRPEGRSSKMEDALSALGAEVVASPGVRTVPVEDNGSLKAAIRNLEDYRWLLFTSP 314
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + A+G+ +A ++ G ++ +
Sbjct: 315 YGVRIFMEQMAADEVDVRKLAGVRLAALGKGTAAELKKYGLFADLIPPVY--DVETLARC 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ--DIAYPETTMKNLLQN 166
+ P+ ++ + N + L + L I Y ++ + T
Sbjct: 373 VRDQTEPEDRILVPRARLGNPVLGEILSDR--RLEEIPVYETEYRRRSALSETALFEKGE 430
Query: 167 ADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++F + SSV F + S +C+ A S VA + L+
Sbjct: 431 VSCVVFTSSSSVKAFCARNEELDFSLVPAVCIGPQTAKTASESGMR-TMVAEKAEMDELV 489
Query: 226 KLLPL 230
+L+
Sbjct: 490 RLVVR 494
>gi|167644092|ref|YP_001681755.1| uroporphyrinogen III synthase HEM4 [Caulobacter sp. K31]
gi|167346522|gb|ABZ69257.1| Uroporphyrinogen III synthase HEM4 [Caulobacter sp. K31]
Length = 234
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 12/233 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I +TR + A T +++ MG P++ PL + S+ L + A+A TS +
Sbjct: 6 RIWVTRALPGAEDTAARLRAMGLPPLVDPLLAVVPLSPSIDL---EGVAALAFTSVNGVE 62
Query: 62 TLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
R P+FA+G+ +A AR+ GF ++ + LA +IV ++
Sbjct: 63 AFARLCTDRDRPVFAVGDRTARAAREAGFGEVASADGDVEALAALIVGSAARID--GAVL 120
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ G L+ + R + Y + + T+ L +L ++ +
Sbjct: 121 HPGALEPAGDMISPLVAAGLTARRVAVYETVERDPDPATLAE-LGTLAVVLLHSPRAARK 179
Query: 181 FFSLPLPA-KISAAFLCLSNNIASAIPASY----KNVVTVACFPKETSLLKLL 228
+ S LCLS ++A A+ + V A P ET+LL LL
Sbjct: 180 LARVLEAHPAPSLRALCLSPSVAGALGTAEQDGRLASVAFAPHPTETALLDLL 232
>gi|229198592|ref|ZP_04325294.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus m1293]
gi|228584874|gb|EEK42990.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus m1293]
Length = 250
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 74/237 (31%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDRLRQKLPVTTKIAAVGVKTKLELEKRGYRVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y +++ + + L+ D I F +
Sbjct: 129 RILFPKGNLARDVIPVALREMGVSLDELIVYGTKENVEKKQELIEALEVGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y + + +LL+
Sbjct: 189 STVTSFVRLLEDTNWREWTKKCTIACIGPITEKEA-SLYFPHIIMPKEYTVEALLQC 244
>gi|218235862|ref|YP_002369270.1| uroporphyrinogen-III synthase [Bacillus cereus B4264]
gi|218163819|gb|ACK63811.1| uroporphyrinogen-III synthase [Bacillus cereus B4264]
Length = 250
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 73/236 (30%), Gaps = 13/236 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLKKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREIIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SFYFPSVIVPKEYTVEALLQ 243
>gi|47566653|ref|ZP_00237475.1| uroporphyrinogen-III synthase [Bacillus cereus G9241]
gi|47556683|gb|EAL15015.1| uroporphyrinogen-III synthase [Bacillus cereus G9241]
Length = 250
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 76/238 (31%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
+++TR +A + +++M IP+ +PL SY + TS
Sbjct: 9 VLVTRAQHQAKQMSVAVKEMSGIPLEIPLLRMEGMSHRQIQHIAEQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDRLRQKLPVTTKIAAVGVKTKLELEKRGYEVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y +++ + + L+ D I F +
Sbjct: 129 CILFPKGNLARDVIPVALREIGVSLDELIVYGTKENVEKKRELIEALEVGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ + Y + + +LL+ +
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHIIMPKEYTVEALLQCI 245
>gi|149924217|ref|ZP_01912592.1| uroporphyrinogen III synthase/methyltransferase [Plesiocystis
pacifica SIR-1]
gi|149814923|gb|EDM74485.1| uroporphyrinogen III synthase/methyltransferase [Plesiocystis
pacifica SIR-1]
Length = 512
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/256 (10%), Positives = 64/256 (25%), Gaps = 30/256 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYF--------IHDRESVFLAMQQSYGAIA 53
+V+TR +++ + G V P ++ +
Sbjct: 249 RVVVTRAARQSGGLLHALAGAGADAVAFPCLEVAAPEPAEREALDAALAPDRLAGLEGVI 308
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEA-------SACLARQKGFTQIFHGKDNSINLAKII 106
++S L R + AR + +I
Sbjct: 309 VSSPNGADALFDALARLNLDARAFAGKLLAAIGTGTAARCQAKGLRPDLIPAKARSEGLI 368
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA------YPETTM 160
+ +++ + + E + ++ Y + +
Sbjct: 369 ELLRARGLLGGRWLHVRADQGRKLLAEAISEAGGSIELVIGYRTVRPEVPGLLLDSLRPV 428
Query: 161 KNLLQNADAILFYARSSVLYFFS---------LPLPAKISAAFLCLSNNIASAIPASYKN 211
+ + DAI F + + +F A + + A A+ A
Sbjct: 429 ADGGEGYDAICFASGRTARHFLETTGERFGADAARGFLEQAKIVAIGPVTADALAALDLR 488
Query: 212 VVTVACFPKETSLLKL 227
V VA P + +++
Sbjct: 489 VDAVADTPSDAGMVEA 504
Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 12/142 (8%), Positives = 33/142 (23%), Gaps = 12/142 (8%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY------ 155
L + + + + ++ ++ L C
Sbjct: 233 LREQLAWLERRPLFGRRVVVTRAARQSGGLLHALAGAGADAVAFPCLEVAAPEPAEREAL 292
Query: 156 PETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASY 209
+ L + ++ + + F + A + A+ A
Sbjct: 293 DAALAPDRLAGLEGVIVSSPNGADALFDALARLNLDARAFAGKLLAAIGTGTAARCQAKG 352
Query: 210 KNVVTVACFPKETSLLKLLPLR 231
+ + L++LL R
Sbjct: 353 LRPDLIPAKARSEGLIELLRAR 374
>gi|291295783|ref|YP_003507181.1| Uroporphyrinogen III synthase HEM4 [Meiothermus ruber DSM 1279]
gi|290470742|gb|ADD28161.1| Uroporphyrinogen III synthase HEM4 [Meiothermus ruber DSM 1279]
Length = 226
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 12/226 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I +T+ + QE+++ MG + PL LA TS ++
Sbjct: 1 MRIALTQSEGRLEGLQERLEAMGLEVLRFPLVQTQTLPAD--LAPLDDCRWWLFTSVAAV 58
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ P A+G + A+ + E + P +
Sbjct: 59 RAVLE-LRGSLPGRALGAVGRATQQALEEAGGRVDLVAPEETAESLAEAFLALRPFGFVG 117
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
G L E +R + Y +Q + +P + +L + + V
Sbjct: 118 LPQGNRARPVLAQRLREAGYVVRSVVVYQTQTLPWPSDG-----PVPELVLLTSPTGVEA 172
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
L L A+A+ V P ++L+
Sbjct: 173 LPEAV---GRKVHLLALGPTTAAALSERGFPHTVV-PRPSVEAVLE 214
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 6/115 (5%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + R ++ L + + +Q + L + LF + ++
Sbjct: 2 RIALTQSEGRLEGLQERLEAMGLEVLRFPLVQTQTLPAD----LAPLDDCRWWLFTSVAA 57
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL-LPLR 231
V L + A + A+ + V VA SL + L LR
Sbjct: 58 VRAVLEL-RGSLPGRALGAVGRATQQALEEAGGRVDLVAPEETAESLAEAFLALR 111
>gi|229081728|ref|ZP_04214221.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock4-2]
gi|228701573|gb|EEL54066.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock4-2]
Length = 250
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 68/237 (28%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEA--SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
++ + + P+ A + H E + +
Sbjct: 69 VAFFLDSLKKKLPLTINIAAVGVKTKLELEKRGYQVHFVPTLFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E I L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGISLDELTVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPSVIVPKEYTVEALLQC 244
>gi|300856362|ref|YP_003781346.1| porphyrin biosynthesis protein HemD [Clostridium ljungdahlii DSM
13528]
gi|300436477|gb|ADK16244.1| porphyrin biosynthesis protein HemD [Clostridium ljungdahlii DSM
13528]
Length = 486
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 68/236 (28%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
+ ITR ++ +EK+ +G + + E++ L Y I TS
Sbjct: 251 NVCITRSKAQSREMREKLLDLGAQVTEIHSIEIKYTSENIKEYLDKLLEYDYIIFTSVNG 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK-- 117
+++ + I +A+ V + + +
Sbjct: 311 VNSFFERLLTENYDIRNIKGKFAAIGPATERAIKSKGIIPEIVAEKFVAESLHDKMKGFI 370
Query: 118 ----PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ K + + L E + Y + + + KN + D ++F
Sbjct: 371 KKGDKVFIPRSKNARPYLAEALREEGCIVDECYTYETVAGSLTD---KNCFNDVDTVIFT 427
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ ++V L + I + + + ++ ++K L
Sbjct: 428 SPTTVRNMIELVGLSAIKEKQVISIGPITGKELKKHDI-DYEMSEEYTTDGVIKQL 482
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 40/149 (26%), Gaps = 5/149 (3%)
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
+ + I + + + K + K ++ + L++
Sbjct: 214 EKAEEAGLTSPCIIVIGDVIKFNEQLDWYEKKPLFGKNVCITRSKAQSREMREKLLDLGA 273
Query: 141 PLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA-----AFL 195
+ I + + + L D I+F + + V FF L F
Sbjct: 274 QVTEIHSIEIKYTSENIKEYLDKLLEYDYIIFTSVNGVNSFFERLLTENYDIRNIKGKFA 333
Query: 196 CLSNNIASAIPASYKNVVTVACFPKETSL 224
+ AI + VA SL
Sbjct: 334 AIGPATERAIKSKGIIPEIVAEKFVAESL 362
>gi|118479629|ref|YP_896780.1| uroporphyrinogen-III synthase [Bacillus thuringiensis str. Al
Hakam]
gi|196044772|ref|ZP_03112006.1| uroporphyrinogen-III synthase [Bacillus cereus 03BB108]
gi|229186705|ref|ZP_04313863.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus BGSC 6E1]
gi|118418854|gb|ABK87273.1| uroporphyrinogen-III synthase [Bacillus thuringiensis str. Al
Hakam]
gi|196024260|gb|EDX62933.1| uroporphyrinogen-III synthase [Bacillus cereus 03BB108]
gi|228596718|gb|EEK54380.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus BGSC 6E1]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 73/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDSLRKKLPVTTKIAAVGVKTKLELEKRGYHVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V + +LL+
Sbjct: 189 STVTSFVRLLDGTNWREWTKKCTIACIGPITEKEA-SLYFPHVIMPKEYTVEALLQC 244
>gi|30264531|ref|NP_846908.1| uroporphyrinogen-III synthase [Bacillus anthracis str. Ames]
gi|47529994|ref|YP_021343.1| uroporphyrinogen-III synthase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187355|ref|YP_030607.1| uroporphyrinogen-III synthase [Bacillus anthracis str. Sterne]
gi|65321832|ref|ZP_00394791.1| COG1587: Uroporphyrinogen-III synthase [Bacillus anthracis str.
A2012]
gi|165871979|ref|ZP_02216620.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0488]
gi|167636178|ref|ZP_02394482.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0442]
gi|167640720|ref|ZP_02398980.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0193]
gi|170688682|ref|ZP_02879887.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0465]
gi|170708342|ref|ZP_02898786.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0389]
gi|177653994|ref|ZP_02936035.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0174]
gi|190566946|ref|ZP_03019862.1| uroporphyrinogen-III synthase [Bacillus anthracis Tsiankovskii-I]
gi|227817243|ref|YP_002817252.1| uroporphyrinogen-III synthase [Bacillus anthracis str. CDC 684]
gi|228917101|ref|ZP_04080659.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228929510|ref|ZP_04092529.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935782|ref|ZP_04098594.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229602547|ref|YP_002868747.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0248]
gi|254687047|ref|ZP_05150905.1| uroporphyrinogen-III synthase [Bacillus anthracis str. CNEVA-9066]
gi|254724609|ref|ZP_05186392.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A1055]
gi|254736567|ref|ZP_05194273.1| uroporphyrinogen-III synthase [Bacillus anthracis str. Western
North America USA6153]
gi|254741605|ref|ZP_05199292.1| uroporphyrinogen-III synthase [Bacillus anthracis str. Kruger B]
gi|254754797|ref|ZP_05206832.1| uroporphyrinogen-III synthase [Bacillus anthracis str. Vollum]
gi|254757629|ref|ZP_05209656.1| uroporphyrinogen-III synthase [Bacillus anthracis str. Australia
94]
gi|30259189|gb|AAP28394.1| uroporphyrinogen-III synthase [Bacillus anthracis str. Ames]
gi|47505142|gb|AAT33818.1| uroporphyrinogen-III synthase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181282|gb|AAT56658.1| uroporphyrinogen-III synthase [Bacillus anthracis str. Sterne]
gi|164712269|gb|EDR17805.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0488]
gi|167511292|gb|EDR86678.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0193]
gi|167528399|gb|EDR91167.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0442]
gi|170126717|gb|EDS95600.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0389]
gi|170667368|gb|EDT18126.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0465]
gi|172081049|gb|EDT66127.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0174]
gi|190561937|gb|EDV15906.1| uroporphyrinogen-III synthase [Bacillus anthracis Tsiankovskii-I]
gi|227005479|gb|ACP15222.1| uroporphyrinogen-III synthase [Bacillus anthracis str. CDC 684]
gi|228823839|gb|EEM69659.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830089|gb|EEM75707.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842519|gb|EEM87609.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229266955|gb|ACQ48592.1| uroporphyrinogen-III synthase [Bacillus anthracis str. A0248]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI---HDRESVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL H + SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMFHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A+ E+ + +
Sbjct: 69 VAFFLDCLGKKLPVTTKIAAVGVKTKLELEKRGYHVDFVPTSFVAEAFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V + +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHVIMPKEYTVEALLQC 244
>gi|206975954|ref|ZP_03236864.1| uroporphyrinogen-III synthase [Bacillus cereus H3081.97]
gi|217961955|ref|YP_002340525.1| uroporphyrinogen-III synthase [Bacillus cereus AH187]
gi|222097909|ref|YP_002531966.1| uroporphyrinogen-iii synthase [Bacillus cereus Q1]
gi|229141204|ref|ZP_04269743.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus BDRD-ST26]
gi|206745706|gb|EDZ57103.1| uroporphyrinogen-III synthase [Bacillus cereus H3081.97]
gi|217064269|gb|ACJ78519.1| uroporphyrinogen-III synthase [Bacillus cereus AH187]
gi|221241967|gb|ACM14677.1| uroporphyrinogen-III synthase [Bacillus cereus Q1]
gi|228642245|gb|EEK98537.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus BDRD-ST26]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 74/237 (31%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
+++TR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLVTRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDRLRQKLPVTTKIAAVGVKTKLELEKRGYRVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y +++ + L+ D I F +
Sbjct: 129 RILFPKGNLARDVIPVALREMGVSLDELIVYGTKENVEKRQELIEALEVGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y + + + +LL+
Sbjct: 189 STVTSFVRLLEDTNWREWTKKCTIACIGPITEKEA-SLYFSHIIMPKEYTVEALLQC 244
>gi|229093560|ref|ZP_04224661.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock3-42]
gi|228689769|gb|EEL43575.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus Rock3-42]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDYLRKKLPVTTKIAAVGVKTKLELEKRGYHVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 CILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V + +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHVIMPKEYTVEALLQC 244
>gi|229175145|ref|ZP_04302661.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus MM3]
gi|228608281|gb|EEK65587.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus MM3]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 74/238 (31%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
+++TR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLVTRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + + P A + + +A++ E+ + +
Sbjct: 69 VAFFLDSLRKKLPAKTKIAAVGVKTRLELENRGYQVDFVPTSFVAEVFAEEFVKRISGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E I L + Y ++ + +L+ D I F +
Sbjct: 129 CILFPKGNLARDVIPVALREIGISLDELIVYGTKANVEKRQELIAVLEAGEVDVITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ + Y V + +LL+ +
Sbjct: 189 STVTNFVRLLDGTNWREWTKKCTIACIGPITEKEA-SLYFPHVIMPKEYTVEALLQCI 245
>gi|209883481|ref|YP_002287338.1| uroporphyrinogen-III synthase [Oligotropha carboxidovorans OM5]
gi|209871677|gb|ACI91473.1| uroporphyrinogen-III synthase [Oligotropha carboxidovorans OM5]
Length = 254
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 88/241 (36%), Gaps = 15/241 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP T ++ GY ++ P F Y AI TS+ +L
Sbjct: 1 MSILVMRPFPDNEATAAALRDEGYSVLLSPALRFEPVPLREEPDAL-PYDAILATSANAL 59
Query: 61 STLPANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ T +FA+G+A+A +AR GF + + +I + +
Sbjct: 60 RGIEGKPILERLCETKLFAVGDATAQIARNAGFRDVESAAGD---AVALIALVEARMRGK 116
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYA 174
+ YL G + L + + Y + + ++ +A+L Y+
Sbjct: 117 GRICYLAGADVSRDLGADLGAQGYSVTTLTTYRMIPLPHFSEAVEAAFAAGEVEAVLHYS 176
Query: 175 RSSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
R S F + A + + C+SN + + + + V VA P E ++ + L
Sbjct: 177 RRSARAFVAAVQAAGLEISALALPQFCISNVVGTVLQEAGAARVRVAAAPDEPAMFEALQ 236
Query: 230 L 230
Sbjct: 237 R 237
>gi|228941630|ref|ZP_04104177.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228974559|ref|ZP_04135125.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981154|ref|ZP_04141454.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis Bt407]
gi|228778354|gb|EEM26621.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis Bt407]
gi|228784962|gb|EEM32975.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817842|gb|EEM63920.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326942242|gb|AEA18138.1| uroporphyrinogen-III synthase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 70/237 (29%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP-QK 117
++ + + P+ A + + +A+ E+ + +
Sbjct: 69 VAFFLDSLKKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEELLKELNGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLARDVIPVKLREIGVFLDELIVYGTKVNVEKKQELIAALKLGEVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ V V +LL+
Sbjct: 189 STVTSFVRLLEGANWREWTKKCTIACIGPITEKEASRY-FPSVIVPKEYTVEALLQC 244
>gi|229071972|ref|ZP_04205182.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus F65185]
gi|228711131|gb|EEL63096.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus F65185]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 68/237 (28%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIEEQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEA--SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
++ + + P+ A + H E + +
Sbjct: 69 VAFFLDSLKKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTLFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E I L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGISLDELTVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V V +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPSVIVPKEYTVEALLQC 244
>gi|229158081|ref|ZP_04286151.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus ATCC 4342]
gi|228625400|gb|EEK82157.1| Uroporphyrinogen III synthase HEM4 [Bacillus cereus ATCC 4342]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 75/238 (31%), Gaps = 13/238 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
+++TR +A + +++M IP+ +PL SY + TS
Sbjct: 9 VLVTRAQHQAKQMSVAVKEMSGIPLEIPLLRMEGMSHRQIQHIAEQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDRLRQKLPVTTKIAAVGVKTKLELEKRGYEVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y +++ + + L D I F +
Sbjct: 129 CILFPKGNLARDVIPVALREIGVSLDELIVYGTKENVGKKRELIEALELGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V F L C+ + Y + + +LL+ +
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHIIMPKEYTVEALLQCI 245
>gi|153940312|ref|YP_001390274.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum F str. Langeland]
gi|152936208|gb|ABS41706.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum F str. Langeland]
Length = 486
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 73/239 (30%), Gaps = 14/239 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++A + ++ +G + + E++ L + Y IA+TS +
Sbjct: 251 NICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNAEENLKPYLNRLKEYDYIALTSVNA 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLA------RQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A + + K + E K
Sbjct: 311 VKIFFDYLIKENIDIRNINAKFAAIGPATSEAIRMRGIMPSIKSKHFVAESLFEEMKNHI 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++ K D L + + + Y + T +NAD +LF
Sbjct: 371 QKGDKILVPRSKDARPFLVDALRKEGCAVDEVHIYETLCGQC---TYTERFENADTVLFT 427
Query: 174 ARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK-LLPL 230
+ S+V S+ I + + A+ + + ++ ++ LL L
Sbjct: 428 SPSTVRNMISMVGIDSIKEKNIIAIGPITAAELDKNNIEC-SICDEYSINGIIDKLLAL 485
>gi|54310582|ref|YP_131602.1| uroporphyrinogen III synthase [Photobacterium profundum SS9]
gi|46915025|emb|CAG21800.1| hypothetical uroporphyrinogen III synthase [Photobacterium
profundum SS9]
Length = 248
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/242 (10%), Positives = 57/242 (23%), Gaps = 16/242 (6%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSESL 60
ITRP +++ G + PL + L ++ + + S ++
Sbjct: 2 ITRPEPDCHELTQQLNAAGINAIAQPLLTIKAGNDLPDLINQLKKLKTDDFLIVISVHAV 61
Query: 61 STLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + Q+ Q + ++ ++
Sbjct: 62 NLAHNYLMSQDVCWPKNVHYIAVGHKTATTLQRVTGQKVISPQTRCDSEGLLALPELANV 121
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF-- 172
+ ++ L G L E + + Y +A + Q +
Sbjct: 122 TDRQILILRGNGGRELIHQTLTERNAKVSYCETYQRTWLALNGEALCRTWQAQNVSTLVV 181
Query: 173 YARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + Y L S IA+ + +L L
Sbjct: 182 TSGEQLAYLTHLVPKQYLTWFFQCHLFVPSQRIANQAKNLGYKNFSTVGSASNKALFTFL 241
Query: 229 PL 230
Sbjct: 242 SK 243
>gi|228910298|ref|ZP_04074115.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis IBL 200]
gi|228849358|gb|EEM94195.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis IBL 200]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL + SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLHMEGMSHRQIQHIEGQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLNKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLARDVIPVKLREIGVSLDELIVYGTKVNVEKKQELIAALKLGKIDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ V V +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEASRY-FPSVIVPKEYTVEALLQC 244
>gi|170758719|ref|YP_001786307.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum A3 str. Loch Maree]
gi|169405708|gb|ACA54119.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum A3 str. Loch Maree]
Length = 486
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 69/236 (29%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++A + ++ +G + + E++ L + Y IA+TS +
Sbjct: 251 NICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNAEENLKPYLNRLKEYDYIALTSVNA 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLA------RQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A K + K + E K
Sbjct: 311 VKIFFDYLIKENIDIRNINAKFAAIGPATSEAIKVRGIMPSIKSKHFVAESLFEEMKKHV 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++ K D L + + + Y + ++ D +LF
Sbjct: 371 QSGDKVLVPRSKDARPFLVDALKKEGCIVDEVHIYETLCGQSS---HAERFEDVDTVLFT 427
Query: 174 ARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V S+ I + + A+ + + ++ ++ L
Sbjct: 428 SPSTVKNMISMVGIDSIKEKNIIAIGPITAAELDKNNIKC-SICDEYSINGIIDKL 482
>gi|182416895|ref|ZP_02948279.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
butyricum 5521]
gi|237667738|ref|ZP_04527722.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182379193|gb|EDT76694.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
butyricum 5521]
gi|237656086|gb|EEP53642.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 491
Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/234 (13%), Positives = 64/234 (27%), Gaps = 13/234 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAITSSES 59
I +TR K+ ++ ++K++ MG + E++ + Y I TS S
Sbjct: 251 NICVTRSQKQGVKLRDKLRDMGAEVTSISAIEIEPSPENLNEYMDKLEEYEHILFTSVNS 310
Query: 60 LSTLPANFCR----HTPIFAIGEASACLARQ--KGFTQIFHGKDNSINLAKIIVEQKVLF 113
++ + + A A Q + + K ++ K
Sbjct: 311 VNIFFDYLIKKGYDIRRLKAKISAIGKATWQSLECRGIVCFEKAREFIGEGLVEVLKPYI 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++ + L + + + Y + K D + F
Sbjct: 371 NEHDKILIPCSSIAKEDIAESLKKAGAEVDRVFIYNTVKGIL---RNKKAFDEVDVVFFT 427
Query: 174 ARSSVLYFFSLPL-PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ S+V + A + + I V E LK
Sbjct: 428 SPSTVYNMIDMVGLDAVKEKHIIAIGQKTNKPIEEFGIKAD-VCREHSEEGFLK 480
Score = 39.0 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 17/157 (10%), Positives = 43/157 (27%), Gaps = 11/157 (7%)
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
+ + + +NL + + + + + D L +
Sbjct: 214 EKVRKAGLQSPCIIVVGKVVNLHDDLAWYENKPLFGTNICVTRSQKQGVKLRDKLRDMGA 273
Query: 141 PLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAK-----ISAAFL 195
+ I + + L+ + ILF + +SV FF + + A
Sbjct: 274 EVTSISAIEIEPSPENLNEYMDKLEEYEHILFTSVNSVNIFFDYLIKKGYDIRRLKAKIS 333
Query: 196 CLSNNIASAIPASYKNVVTVACFPKE---TSLLKLLP 229
+ + + +E L+++L
Sbjct: 334 AIGKAT---WQSLECRGIVCFEKAREFIGEGLVEVLK 367
>gi|49478645|ref|YP_038513.1| uroporphyrinogen-III synthase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49330201|gb|AAT60847.1| uroporphyrinogen-III synthase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 250
Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 74/237 (31%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDYLRKKLPVTTKIAAVGVKTKLELEKRGYEVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYAR 175
+++ G L E + L + Y +++ + + L+ D I F +
Sbjct: 129 CILFPKGNLARDVIPVALREIGVSLDELIVYGTKENVEKKRELIEALEVGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V + +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHVIMPKEYTVEALLQC 244
>gi|42520812|ref|NP_966727.1| uroporphyrinogen-III synthase, putative [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410552|gb|AAS14661.1| uroporphyrinogen-III synthase, putative [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 235
Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 87/237 (36%), Gaps = 15/237 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I++TRP+ + T+ ++K GY + P+ + + + + TS S
Sbjct: 1 MKSILLTRPLLDSFNTRNILRKYGYKVYIEPVFTIKYLNPDI---SAHEFDVVISTSKNS 57
Query: 60 LSTLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ PI +G ++ A+ GF+ I N L I
Sbjct: 58 VKAFSQICKVDDFPIITVGNSTMQAAKNLGFSDIISADSNVDGLISFIKAHYSSAI---K 114
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL--FYARS 176
+Y+ G+ + + L E +R + Y + KNLL + F++
Sbjct: 115 FLYIRGQEVSCDLKKRLSEEDFNVREVVLYKTIIKRSLTNRCKNLLLDGKIGSVAFFSSQ 174
Query: 177 SVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F SL L + + + +S NIA ++ + + P SL+ ++
Sbjct: 175 TARVFCSLVLKSGLSHVMNNTVAYTMSKNIADSLKLIKWKKIITSRLPTGESLIDII 231
>gi|58617280|ref|YP_196479.1| hypothetical protein ERGA_CDS_05530 [Ehrlichia ruminantium str.
Gardel]
gi|58416892|emb|CAI28005.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 247
Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 86/238 (36%), Gaps = 17/238 (7%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP + ++ +E + +G+ + P+ + + + I TS S
Sbjct: 6 MKSLLVTRPQEDSIIIKETLTNLGFNIYIEPMFSIKYLPVK---LNLEYFDLIISTSKHS 62
Query: 60 LSTLPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ L R PI +G+ + +A + GF+ + N ++ I
Sbjct: 63 IIALSKISKNRTQPIITVGDNTKQVAEKLGFSSVTSLNGNIHDIISYI-----HNNSHLK 117
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
+Y+ G+ + ++ + I I Y + D LL + ILFY+
Sbjct: 118 FLYIRGQEITYDLKEIFSNNTIKFYEIILYSTIDKQSLSNHCYKLLFHNRISGILFYSSR 177
Query: 177 SVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ F L I S +S IA + + + P SL+ L+
Sbjct: 178 TATIFMDLIKKHNIGHKTSSITVYAMSQKIAETVNNISWKSIKTSDKPTNKSLISLIS 235
>gi|160879928|ref|YP_001558896.1| uroporphyrin-III C-methyltransferase [Clostridium phytofermentans
ISDg]
gi|160428594|gb|ABX42157.1| uroporphyrin-III C-methyltransferase [Clostridium phytofermentans
ISDg]
Length = 497
Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/239 (15%), Positives = 78/239 (32%), Gaps = 21/239 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+V+TRP K K+ +G VM+ +Y ++ L Q I S
Sbjct: 256 RVVVTRPKDKVSSLATKLYDLGAEVVMLSGTYTKPIEDNTQLIEVLDTIQDNKWILFASE 315
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ + A+G + ++G + + ++
Sbjct: 316 VAVDIFFDCLWQQQIDIRSLWNCHFAAVGPTTRKAIEKRGIRVDYMPEKYYGM--ELAKG 373
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ + PQ ++ L K + +YL K+ ++ + Y + ++ +D
Sbjct: 374 IEAMAKPQDKVLVLIPKETDSELANYLSTTKVNMKAVPVYEIVYEDNEQVNIEE----SD 429
Query: 169 AILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F + S+V F + +C+ A + VA SL++
Sbjct: 430 IVTFTSASTVRSFVNTMKDIDFHKVQAVCIGELTAKEAAFYGMK-INVAKEATIDSLIE 487
>gi|225866444|ref|YP_002751822.1| uroporphyrinogen-III synthase [Bacillus cereus 03BB102]
gi|225787015|gb|ACO27232.1| uroporphyrinogen-III synthase [Bacillus cereus 03BB102]
Length = 250
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 73/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDSLRKKLPVTTKIAAVGVKTKLELEKRGYHVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIPALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V + +LL+
Sbjct: 189 STVTSFVRLLDGTNWREWTKKCTIACIGPITEKEA-SLYFPHVIMPKEYTVEALLQC 244
>gi|148378913|ref|YP_001253454.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum A str. ATCC 3502]
gi|153933478|ref|YP_001383296.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum A str. ATCC 19397]
gi|153935140|ref|YP_001386844.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum A str. Hall]
gi|148288397|emb|CAL82474.1| porphyrin biosynthesis protein [includes: uroporphyrin-III
C-methyltransferase and uroporphyrinogen-III synthase
[Clostridium botulinum A str. ATCC 3502]
gi|152929522|gb|ABS35022.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum A str. ATCC 19397]
gi|152931054|gb|ABS36553.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum A str. Hall]
Length = 486
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 72/236 (30%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++A + ++ +G + + +++ L+ + Y IA+TS +
Sbjct: 251 NICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNTEDNLKSYLSKLKEYDYIALTSVNA 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLA------RQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A + + K + E +
Sbjct: 311 VKIFFDYLIKENIDIRNINAKFAAIGPATSEAIRIRGIMPSIKSKHFVAESLFEEMRKHI 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++ K D L + + + Y + T ++AD +LF
Sbjct: 371 QKGDKILVPRSKDARPFLVDALRKEGCTVDEVHIYGTLCGQC---TYTERFEDADTVLFT 427
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V S+ I + + A+ + + ++ ++ L
Sbjct: 428 SPSTVRNMISMVGIDSIKEKSIIAIGPITAAELDKNNIEC-SICDEYSINGIIDKL 482
>gi|33520024|ref|NP_878856.1| uroporphyrinogen-III synthase [Candidatus Blochmannia floridanus]
gi|33504370|emb|CAD83263.1| uroporphyrinogen III synthase [Candidatus Blochmannia floridanus]
Length = 247
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 78/247 (31%), Gaps = 18/247 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G +PL F + +L + + I S
Sbjct: 1 MSILITRPTPDGEDLVDRLVSIGKSAYHLPLISFSTGKTLFSIKKYLNFLHTGDFLFIVS 60
Query: 57 SESLSTLPANF-----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ I ++ + I + ++ +++
Sbjct: 61 QHAVKYAHIQLLSSGTQWPHKITYYSIGHKTSSKMYSLSGILSKYPQNEETSENLLQFPE 120
Query: 112 LFTPQ--KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNA 167
L + + L G + L + + +CY + I Y E + + +
Sbjct: 121 LIYNISGRRALILKGNNGLTTLQHTLQKRGALVLCCECYTRKPIQYNGKEQYNRMITLDI 180
Query: 168 DAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ I+ + + L I+ + SN +A + + + + T
Sbjct: 181 EIIVVTTTDMLKQLYYLIPQSHRTDWLITRQLVVTSNRLAEYAKSLGWSDIIITKSANNT 240
Query: 223 SLLKLLP 229
++L+ L
Sbjct: 241 TILRALQ 247
>gi|295706768|ref|YP_003599843.1| uroporphyrinogen-III synthase [Bacillus megaterium DSM 319]
gi|294804427|gb|ADF41493.1| uroporphyrinogen-III synthase [Bacillus megaterium DSM 319]
Length = 257
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 25/246 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSSE 58
++ITR K+A +I+K+G IP+ +P+ F L + I TS
Sbjct: 12 VLITREAKQAHSFAAQIKKLGGIPLSLPVLTFARSNNEKEVEDVLLSIDCFDWIVFTSQN 71
Query: 59 SLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+S + + A+GE +A L + K+ ++
Sbjct: 72 GISFFFEWLKELNISWSALKRLKVAAVGEKTAKLLEKHDVNVQLVPKEYVA--ESLLESL 129
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-NAD 168
K + ++ + G+ +D L E + + Y + E +K L+ D
Sbjct: 130 KANVAHHERVLLVRGQLARSVLKDGLKE--CEVTDLVVYQTIRNQDSERLVKQHLETGID 187
Query: 169 AILFYARSSVLYFFSLPLPAK------ISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
AI F + S V +F A +C+ + V
Sbjct: 188 AITFTSSSIVRFFVESVKDIPNWLELINRAKVVCIGPITSQTASEYGIKH-LVPNTYTIN 246
Query: 223 SLLKLL 228
++ +L
Sbjct: 247 GMIDML 252
>gi|57239265|ref|YP_180401.1| hypothetical protein Erum5380 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579228|ref|YP_197440.1| hypothetical protein ERWE_CDS_05640 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161344|emb|CAH58267.1| putative uroporphyrinogen-III synthase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417854|emb|CAI27058.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 242
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 87/238 (36%), Gaps = 17/238 (7%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP + ++ +E + +G+ + P+ + + + I TS S
Sbjct: 1 MKSLLVTRPQEDSIIIKETLTNLGFNIYIEPMFSIKYLPVK---LNLEYFDLIISTSKHS 57
Query: 60 LSTLPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ L R PI +G+ + +A + GF+ + N ++ I
Sbjct: 58 IIALSKISKNRTQPIITVGDNTKQVAEKLGFSSVTSLNGNIHDIISYI-----HNNSHLK 112
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
+Y+ G+ + ++ + I I Y + D NLL + ILFY+
Sbjct: 113 FLYIRGQEITYDLKEIFSNNTIKFYEIILYSTIDKQSLSNHCYNLLFHNRISGILFYSSR 172
Query: 177 SVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ F L I S +S IA + + + P SL+ L+
Sbjct: 173 TATIFMDLIKKHNIGHKTSSITVYAMSQKIAETVNNISWKSIKTSDKPTNKSLISLIS 230
>gi|270158067|ref|ZP_06186724.1| uroporphyrinogen-III synthase [Legionella longbeachae D-4968]
gi|289163668|ref|YP_003453806.1| Uroporphyrinogen-III synthetase [Legionella longbeachae NSW150]
gi|269990092|gb|EEZ96346.1| uroporphyrinogen-III synthase [Legionella longbeachae D-4968]
gi|288856841|emb|CBJ10652.1| Uroporphyrinogen-III synthetase [Legionella longbeachae NSW150]
Length = 252
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 71/227 (31%), Gaps = 13/227 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES--VFLAMQQSYGAIAITSSES 59
I+ TRP ++A + E I+ G I + +P L + S+ +
Sbjct: 9 RILNTRPQEQAHKLTESIRASGGIAIELPALEIQASNSDWVDLLPNLDNVTHAIFISANA 68
Query: 60 LSTLPANFCRHTPIFAIGEASAC-----LARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + + + F N ++ +
Sbjct: 69 VHYCFTQLNQLQINWPTSIQVIAIGQGTASSLQKFNIQVSAIPEFPNSEHLLSLDTLQHL 128
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILF 172
+ ++ GK E+ L++ L ++ Y ++++ ++ D IL
Sbjct: 129 ENQNVLLFKGKEGRPLIEEQLMQKGAKLVILKVYQRVMPKPSPLLVQSIWRDDLVDIILL 188
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTV 215
+ S+L F + +L +S IA + + + +
Sbjct: 189 TSEQSLLNLFKIFDKEAHDWLKSKRWLVISERIAQIASSLGIHKINI 235
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 36/122 (29%), Gaps = 4/122 (3%)
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ + + + + + Q + L N
Sbjct: 1 MKRSLNGLRILNTRPQEQAHKLTESIRASGGIAIELPALEIQASNSDWVDLLPNLDNVTH 60
Query: 170 ILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+F + ++V Y F+ +I+ + + AS++ V + FP LL
Sbjct: 61 AIFISANAVHYCFTQLNQLQINWPTSIQVIAIGQGTASSLQKFNIQVSAIPEFPNSEHLL 120
Query: 226 KL 227
L
Sbjct: 121 SL 122
>gi|196039193|ref|ZP_03106499.1| uroporphyrinogen-III synthase [Bacillus cereus NVH0597-99]
gi|196029820|gb|EDX68421.1| uroporphyrinogen-III synthase [Bacillus cereus NVH0597-99]
Length = 250
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI---HDRESVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL H + SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMFHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A+ E+ + +
Sbjct: 69 VAFFLDCLGKKLPVTTKIAAVGVKTKLELEKRGYHVDFVPTSFVAEAFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFMSP 188
Query: 176 SSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V + +LL+
Sbjct: 189 STVTSFVRLLKGTNWREWTKKCTIACIGPITGKEA-SLYFPHVIMPKEYTVEALLQC 244
>gi|300866712|ref|ZP_07111396.1| Uroporphyrinogen III methylase [Oscillatoria sp. PCC 6506]
gi|300335312|emb|CBN56556.1| Uroporphyrinogen III methylase [Oscillatoria sp. PCC 6506]
Length = 535
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 61/250 (24%), Gaps = 26/250 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
I++TR + + +++Q G + MP L A ++ + +TS+
Sbjct: 267 ILVTRSMGQNSEFSDRLQLEGAQVIEMPALAIGPPASWEALDSAIAQLSNFNWLILTSTN 326
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
I +G+ +A R F D + +
Sbjct: 327 GTDYFFQRLAASGKDARALSGIKIAVVGKKTADSLRSHSLIPDFIPPDFIADS--LAANF 384
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-- 167
K L L + + Y S LQN
Sbjct: 385 PDNLDGCKILFPRVESGGREALVKELTAKGAQVTEVPAYQSCCPETIPPAALAALQNRSV 444
Query: 168 DAILFYARSSVLYFFSLPL---------PAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
+ I F + +V F L + + + + + A
Sbjct: 445 NIITFASSKTVQNFCHLIETYPELSLPSDWENRVCIASIGPETSKTCKNLFGWLDVEAKE 504
Query: 219 PKETSLLKLL 228
L +
Sbjct: 505 YTLDGLRTAI 514
>gi|160879517|ref|YP_001558485.1| uroporphyrin-III C-methyltransferase [Clostridium phytofermentans
ISDg]
gi|160428183|gb|ABX41746.1| uroporphyrin-III C-methyltransferase [Clostridium phytofermentans
ISDg]
Length = 502
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 70/245 (28%), Gaps = 20/245 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
IV+TRP + EK++ G + +P + ++ L + + TS
Sbjct: 255 KIVVTRPKELVSTLSEKLKSKGAEVLEIPTIRIAPLKNNIVLKNTLLQLDQFQWLVFTSP 314
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + +GE + +G ++ +
Sbjct: 315 SGVDVFFNAMKEEKIDIRKLANLKVAVVGEGTKKKVEDRGILVDLIPENYYGKSLGKSIR 374
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHK-IPLRVIDCYYSQDIAYPETTMKNLLQNA 167
++ N + + ++ + + I Y + +K+ +
Sbjct: 375 MSCCDGD--RILIPRASIGNEEIMEEIKKNPLLEVMDIPIYDTVYSTPDIINLKDEFERG 432
Query: 168 DA--ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ +F ++S+V F +C+ + ++ SL
Sbjct: 433 NIDFAVFTSKSTVTGFVKATKDLDYHLVNAVCIGEQTRDEAQKNNMK-TWMSKKATIDSL 491
Query: 225 LKLLP 229
++ +
Sbjct: 492 VETIE 496
>gi|58697045|ref|ZP_00372506.1| uroporphyrinogen-III synthase [Wolbachia endosymbiont of Drosophila
simulans]
gi|225630664|ref|YP_002727455.1| uroporphyrinogen-III synthase [Wolbachia sp. wRi]
gi|58536686|gb|EAL59974.1| uroporphyrinogen-III synthase [Wolbachia endosymbiont of Drosophila
simulans]
gi|225592645|gb|ACN95664.1| uroporphyrinogen-III synthase [Wolbachia sp. wRi]
Length = 235
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 88/237 (37%), Gaps = 15/237 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I++TRP+ + T+ ++K GY + P+ + + + + TS S
Sbjct: 1 MKSILLTRPLLDSFNTRNILRKYGYKVYIEPVFTIKYLNPDI---SAYEFDVVISTSKNS 57
Query: 60 LSTLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ PI +G ++ A+ GF+ I N L I
Sbjct: 58 VKAFSQICKEDDFPIITVGNSTMQAAKNLGFSDIISADSNVDGLISFIKAHYSNAI---K 114
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
+Y+ G+ + + L E +R + Y + KNLL + + F++
Sbjct: 115 FLYIRGQEVSCDLKKRLSEEDFNVREVVLYKTIIKRSLTNRCKNLLLDGKIDSVAFFSSQ 174
Query: 177 SVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F SL L + + + +S NIA ++ + + P SL+ ++
Sbjct: 175 TARVFCSLVLKSGLSHVMNNTVAYTMSKNIADSLKLIKWKKIITSRLPTGESLIDII 231
>gi|330813347|ref|YP_004357586.1| uroporphyrinogen-III synthase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486442|gb|AEA80847.1| uroporphyrinogen-III synthase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 229
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 88/229 (38%), Gaps = 11/229 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M+I+ TRP ++ + +K ++G+ + P+ + ++ + +Y ++ TSS +
Sbjct: 1 MHILFTRPEIDSVYSAKKFIQLGHRVSVFPILNIV--KKKIIDINFTNYNSVVFTSSNAA 58
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
L N + F +GEA+A A+QKGF I N + L + I+ +
Sbjct: 59 LCLDQNIQSNIRCFCVGEATAEQAKQKGFNNIITAGGNYLQLKETILNM--ADKNDGKFL 116
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSV 178
Y+ G+ + E+ L + + Y + +L++ I Y+ S
Sbjct: 117 YIRGEDIAHNLEEDLKASGYRIDSVINYTTSLNPDFGQKTLTILKDQSIDLIFVYSNRSA 176
Query: 179 LYFFSLPLPAKISAA-----FLCLSNNIASAIPASYKNVVTVACFPKET 222
+ L +++ LS N+ + V + E
Sbjct: 177 AHLSKLIFNNDLASKCSSVQLRSLSENVFFPLKKIKWKNVKMFSAGNEQ 225
>gi|218905665|ref|YP_002453499.1| uroporphyrinogen-III synthase [Bacillus cereus AH820]
gi|218536983|gb|ACK89381.1| uroporphyrinogen-III synthase [Bacillus cereus AH820]
Length = 250
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI---HDRESVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL H + SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMFHTQIQHIAGQLHSYNWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A+ E+ + +
Sbjct: 69 VAFFLDCLGKKLPVTTKIAAVGVKTKLELEKRGYHVDFVPTSFVAEAFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNLAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V + +LL+
Sbjct: 189 STVTSFVRLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHVIMPKEYTVEALLQC 244
>gi|297183120|gb|ADI19263.1| uroporphyrinogen-III synthase [uncultured delta proteobacterium
HF0200_39L23]
Length = 259
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 65/245 (26%), Gaps = 17/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++TR EK+ +G PL +L + TS
Sbjct: 5 NILVTRQESSDHSLSEKLLSLGAEVHNHPLISIHPPDSWDSFDQYLNQLNKIDWVVFTSR 64
Query: 58 ESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ I A + + ++I E K
Sbjct: 65 NGVLFTFKRLVELGVSTDILKSLRIACFPAAAEALRQKNIETDLVPSHHQSERLIQEFKK 124
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ--DIAYPETTMKNLLQNADA 169
L + + + F ++ L++ + Y ++ + L+ D
Sbjct: 125 LNLSELCFWLVQAEEPRFTLQEELLKMNAEVMTSTVYTNRIPKTDFSPLLRLLHLKKLDW 184
Query: 170 ILFYARSSVLYFFSLPLPAK-----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I+ + S+V FS+ S CL AS + V L
Sbjct: 185 IVLASASAVRNLFSIIPSHWDSEWFNSLKVACLGEITASVAFSHGLKVEIQPEVQDFEHL 244
Query: 225 LKLLP 229
++ +
Sbjct: 245 VQAMA 249
>gi|312963803|ref|ZP_07778274.1| uroporphyrinogen-III synthase [Pseudomonas fluorescens WH6]
gi|311281838|gb|EFQ60448.1| uroporphyrinogen-III synthase [Pseudomonas fluorescens WH6]
Length = 252
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 73/240 (30%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + G +PL + Y A+ + S
Sbjct: 5 RVLLTRPAQESRALAASLSEAGIFSSSLPLLDIEPLPVTPEQQAVFHDLGRYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLAR----QKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ RH P A A+ D+S L ++ ++ +
Sbjct: 65 PAARLALQQLDRHWPRLPWFSVGAATAQVLVDHGLNVHFPETGDDSEALLQLPALREAVA 124
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAIL 171
++ L G+ + L E + ++ Y AY + + L+ + ++
Sbjct: 125 RHDARVLILRGEGGRELLAERLRERGASVDYLELYRRFLPAYDAGVLIRRIQLERLNGVV 184
Query: 172 FYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ ++ +L S +A A+ V +LL +
Sbjct: 185 VSSGQGFVHLQALAGVDWPQVAKLPLFVPSPRVAEMARAAGAEKVVDCRGANAAALLVAI 244
>gi|302803271|ref|XP_002983389.1| hypothetical protein SELMODRAFT_422651 [Selaginella moellendorffii]
gi|300149074|gb|EFJ15731.1| hypothetical protein SELMODRAFT_422651 [Selaginella moellendorffii]
Length = 299
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 83/242 (34%), Gaps = 15/242 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIAITSSES 59
+V+TR K + + ++ + +PL + LA+ +S+ I +TS E+
Sbjct: 51 VVVTRERGKNDKLIKALRNHQIECLELPLIEHTPGPDLHRLALTLQERSFQWIVVTSPEA 110
Query: 60 LSTLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + C + +G+ + R F S ++ +++
Sbjct: 111 AAVFANEWKNAGCPKVKVAVVGDGTKQAFRDTVSQPNFEVGFVSSQATAKVLAEELPKPD 170
Query: 116 QKP---LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
++Y + + L + ++ Y ++ + + + A + F
Sbjct: 171 GGQSLEVLYPASLKASDDLANGLSHRGFKVCRLNTYSTESVKVLPESDVQMALRASVVAF 230
Query: 173 YARSSVLYFFSLP-LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE----TSLLKL 227
+ ++V + L + A C+ A+A + + A P S+L+
Sbjct: 231 ASPTAVKAWMELVAKTHDWNGAAACIGGTSAAAARKAGMEKIFYAHNPGIDGWVESVLEA 290
Query: 228 LP 229
L
Sbjct: 291 LK 292
>gi|153872668|ref|ZP_02001493.1| Uroporphyrinogen III synthase HEM4 [Beggiatoa sp. PS]
gi|152070865|gb|EDN68506.1| Uroporphyrinogen III synthase HEM4 [Beggiatoa sp. PS]
Length = 271
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 75/262 (28%), Gaps = 38/262 (14%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
I++TRP +A + I+ G + +P+ I + L S+
Sbjct: 7 KILVTRPAHQAEHLCQLIEAEGGQSIRLPVIEIIDIEDKTALFDCRMHLDELDIAIFISA 66
Query: 58 ESLS---------------------------TLPANFCRHTPIFAIGEASACLARQKGFT 90
++ T + I A+G+ + + G T
Sbjct: 67 NAVDKSLPTLLTPNHSENEKDSLTPVSTNSTTYFQREEQTLQIIAVGKRTTSTLKAWGLT 126
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
+ + + + + K ++ G+ + L + + I+ Y
Sbjct: 127 ALCPDSPFNSEAVLKMPQMQTEVVQGKKIVIFRGEGGRELLAETLQQRGAIVNYINVYRR 186
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLP---AKISAAFLCLSNNIASAIPA 207
+ ++ + D I + + F++ F+ +S I +
Sbjct: 187 I-QPSVPKWIADI--SVDVITVTSIEGLQNLFAMLEKQVAWLCHTPFVVMSERIRTEAQK 243
Query: 208 SYKN-VVTVACFPKETSLLKLL 228
+ VA + LL +
Sbjct: 244 LGVQAPIFVAPTASDDGLLTAI 265
>gi|188996133|ref|YP_001930384.1| Uroporphyrinogen III synthase HEM4 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931200|gb|ACD65830.1| Uroporphyrinogen III synthase HEM4 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 237
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 82/238 (34%), Gaps = 15/238 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I+ITR ++ K G+ P+ PL F F + Y + TS +
Sbjct: 1 MKNIIITREASGFEEVKDLFIKAGFNPISFPLIRFEPVEIKNF--NLEDYKYLIFTSKNA 58
Query: 60 LSTLPANFCRHT-PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ + + I A+GE +A + G+ I + S K E+ + K
Sbjct: 59 VKYFFSQIPKIDKKIIAVGEKTAKYLEKLGYKDIIVPEVFSAEGLKAYFEKNIDTFKDKK 118
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ-DIAYPETTMKNLLQNADAI--LFYAR 175
+ + L+ + +I Y ++ +I +K+L++N +F +
Sbjct: 119 IALIRASEGMD----TLLNSNFKIDLIPVYETKLNIPENVDEIKSLIENEKVYAIVFSSP 174
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S+ F ++ + + + I + V V ++K L
Sbjct: 175 STFKGFLNIFKEESKKLLDKMLTVAIGKTTKNFIESQGFKVDVVPDKFTFEEIVKKLK 232
>gi|114329087|ref|YP_746244.1| uroporphyrinogen-III synthase [Granulibacter bethesdensis CGDNIH1]
gi|114317261|gb|ABI63321.1| uroporphyrinogen-III synthase [Granulibacter bethesdensis CGDNIH1]
Length = 254
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 51/244 (20%), Positives = 97/244 (39%), Gaps = 22/244 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I++TRP A T ++ +G+ PV+ P +++ A+ +TS+ ++
Sbjct: 14 ILVTRPEPGASATARRLDALGFTPVLAPALEVEIRADALVEEALPDLQAVLVTSANAIPA 73
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
L R P+FA+G+A+A A+ G + ++ L ++ + L KPL+
Sbjct: 74 LDP--LRSLPLFAVGDATARAAQAAGHQDVTSAGKDADRLLMLVRAR--LDPAGKPLLLA 129
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-------------NADA 169
G+ + L + + Y ++ + + L+ A
Sbjct: 130 SGEEQGAFLYQGLSQSGFTVLHRFVYCARPVQALPEQAEQALRILMEGAAPSAGVAGLKA 189
Query: 170 ILFYARSSVLYFFSLPLPAKISAA----FLC-LSNNIASAIPASYKNVVTVACFPKETSL 224
+LF++ + F L A ++ A C +S + AI A + VA P + L
Sbjct: 190 VLFFSPETARSFVRLLDRAGLADAASGLVACVISPAVVEAITALTWRDIRVAAQPTQDDL 249
Query: 225 LKLL 228
L LL
Sbjct: 250 LALL 253
>gi|256827643|ref|YP_003151602.1| uroporphyrin-III C-methyltransferase [Cryptobacterium curtum DSM
15641]
gi|256583786|gb|ACU94920.1| uroporphyrin-III C-methyltransferase [Cryptobacterium curtum DSM
15641]
Length = 579
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 32/261 (12%), Positives = 65/261 (24%), Gaps = 35/261 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------------QSYG 50
IV+TR ++A + +G V P + +SY
Sbjct: 310 IVVTRSREQASVLSSGLSTLGAQVVEFPTIAIKPRSIDAHIRSALMRLASDAAHVRESYD 369
Query: 51 AIAITSSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN 101
+ TS+ + A + AIG A+A +G + +
Sbjct: 370 WVVFTSANGVQCFFAALNELHLDARSLGGVKVAAIGPATAAELHNQGISPDVVPEKFIAE 429
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP----E 157
+ ++ + L + + V+ Y + +
Sbjct: 430 SVAQ-ALVESGVGRGTRVLLPRAAVARDALPNRLTQAGAQVEVLPLYDTVIPHAEVAAQD 488
Query: 158 TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL---------CLSNNIASAIPAS 208
AI F + S+V F + + + + + +
Sbjct: 489 LATSLRAGEVSAITFTSSSTVRNFKEMLAAVMPESELIHLLETVTCASIGPVTSDTMRDL 548
Query: 209 YKNVVTVACFPKETSLLKLLP 229
V A L+ L
Sbjct: 549 TIPVSVQADTHTIPGLISALQ 569
Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYF------IHDRESVFLAMQQSYGAIAIT 55
+++ R ++ + G ++PL + ++ AI T
Sbjct: 445 RVLLPRAAVARDALPNRLTQAGAQVEVLPLYDTVIPHAEVAAQDLATSLRAGEVSAITFT 504
Query: 56 SSESLSTLPANFCRHTP 72
SS ++ P
Sbjct: 505 SSSTVRNFKEMLAAVMP 521
>gi|88812445|ref|ZP_01127694.1| uroporphyrinogen III synthase [Nitrococcus mobilis Nb-231]
gi|88790231|gb|EAR21349.1| uroporphyrinogen III synthase [Nitrococcus mobilis Nb-231]
Length = 267
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 68/244 (27%), Gaps = 17/244 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
IV+TRP +A ++ G + PL ++ A S+ + S
Sbjct: 17 NIVVTRPAHQAESFCRMLEHAGANALRCPLLNISATPKTPSFARLRAELASFDLLIFNSP 76
Query: 58 ESLSTLPANFCRHTPIF-----AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ + + A A A + + ++ +
Sbjct: 77 NAANFGLPQLEPQRRLQGRVKIAAIGAKTAHAIAGLGYSVDIVPATGFDSESLLELPILE 136
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNADA 169
+ L G L + I Y Q + + L +DA
Sbjct: 137 KVGGMKIAILRGSGGRELAGSVLRSRGAEVSYIQVYERQPPSKEQFEQIEQLLLHNRSDA 196
Query: 170 ILFYARSSVLYFFSLPLP---AKISAAFLCLS-NNIASAIPASYK-NVVTVACFPKETSL 224
+ + + L +S P ++ + IA + + + VA P + ++
Sbjct: 197 VAITSGEAFLALWSGIGPRLCHLLNQSTFVFGSRRIADVARSKGLCSPIAVAADPSDEAM 256
Query: 225 LKLL 228
L
Sbjct: 257 FAAL 260
>gi|225848084|ref|YP_002728247.1| uroporphyrinogen-III synthase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644727|gb|ACN99777.1| uroporphyrinogen-III synthase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 241
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 84/242 (34%), Gaps = 12/242 (4%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M ++ITR + + +K G+ P+ P F F ++Y + TS +
Sbjct: 1 MKNVLITREKGQFEEVKSIFEKEGFNPIPFPTIKFEKLPLDNFDE--KNYDYLIFTSKNA 58
Query: 60 LSTLPANF--CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ + + P+ A+G +A +++GF I S K +++ + K
Sbjct: 59 VKFFLEDIEVDKSKPVIAVGSKTANYLKKEGFKNIEIPDAFSGEGLKDYIDKNLDRFKGK 118
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LFYAR 175
+ + + + + + +I ++ L + +F +
Sbjct: 119 KFGLIRALEGSQVLLNQSGKDYFVQLLPIYKTTYNIPDNTEEIEKLFLKKEIYAVVFSSP 178
Query: 176 SSVLYFFSLPLPAK----ISAAFLC-LSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
S+ F ++ K + +C + + A+ V V ++KLL
Sbjct: 179 STFYGFLNVFGVEKSKKFLEDVLVCTIGTTTSKALEDKGFKVNIVPQIFTFEEIVKLLKE 238
Query: 231 RR 232
++
Sbjct: 239 KQ 240
>gi|116254225|ref|YP_770063.1| uroporphyrinogen-III synthase [Rhizobium leguminosarum bv. viciae
3841]
gi|115258873|emb|CAK09981.1| putative uroporphyrinogen-III synthase protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 235
Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 121/240 (50%), Gaps = 17/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A RT ++++ MG+ P+++PL +HD + A+ + GAIA+TS+E++
Sbjct: 1 MRVLVTRPAHSATRTAQRLRDMGHEPLLLPLREPLHDSNAAADALAITGGAIAVTSAEAI 60
Query: 61 STLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L A + P +FA+GE +A AR GF + + N +LA ++ +
Sbjct: 61 RVLSALGEKLHPHLARSLFAVGETTAEEARSLGFRSVASSQGNGRDLADLLAAE-----K 115
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFY 173
L+YL G PR FE L E I V +CY Q + + N DAILFY
Sbjct: 116 PGTLLYLAGTPRAETFERRLRELGIHFSVAECYRMQPTVPDPAEIDAIFANGYPDAILFY 175
Query: 174 ARSSVLYFF-----SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R + FF L P +A LCLS +A AIP + K V ++ E SLL LL
Sbjct: 176 SRQTTEDFFRLPEPRLAPPEHSTARLLCLSEAVAQAIPTALKKSVEISPMADEKSLLSLL 235
>gi|150016168|ref|YP_001308422.1| uroporphyrin-III C-methyltransferase [Clostridium beijerinckii
NCIMB 8052]
gi|149902633|gb|ABR33466.1| uroporphyrin-III C-methyltransferase [Clostridium beijerinckii
NCIMB 8052]
Length = 487
Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 61/234 (26%), Gaps = 13/234 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAITSSES 59
I ITR +++ + + K+ +G E++ ++Y + TS S
Sbjct: 251 NICITRSRRQSEKLKNKLVDLGAEVTSFNSIKIESSAENLNDYIEKIENYDHMVFTSVNS 310
Query: 60 LSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ R +A K I K ++ K
Sbjct: 311 VEIFFDYLIEKDYDIRRIKAKISAIGAATANSLKQRGIICFAKAREFVGEGLVSILKPHL 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ L+ + + L + + Y + K D + F
Sbjct: 371 KDNQTLLLPCSAKSRKYIYEELTNCGASVDKVYIYDTVC---GSVVNKRSFDEVDIVFFT 427
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ S+V + +I + + + V E LK
Sbjct: 428 SPSTVENMIDMLGIEEIKKKQVIAIGPKTNEPLEKYGIKA-YVCKEHSEEGFLK 480
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 61/196 (31%), Gaps = 7/196 (3%)
Query: 39 ESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDN 98
+++ + + + + A + + + S + K +
Sbjct: 174 DNIVEELINNGKEPIFPCAVVMRGTSAKQKKV--VGTLENISQKVKDAKLQSPCIIVVGE 231
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+NL K + + K + + ++ ++ L++ + + + A
Sbjct: 232 VVNLNKDLNWYENKPLFGKNICITRSRRQSEKLKNKLVDLGAEVTSFNSIKIESSAENLN 291
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVV 213
++N D ++F + +SV FF +I A + A+++
Sbjct: 292 DYIEKIENYDHMVFTSVNSVEIFFDYLIEKDYDIRRIKAKISAIGAATANSLKQRGIICF 351
Query: 214 TVACFPKETSLLKLLP 229
A L+ +L
Sbjct: 352 AKAREFVGEGLVSILK 367
>gi|75759962|ref|ZP_00740031.1| Uroporphyrinogen-III synthase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218899631|ref|YP_002448042.1| uroporphyrinogen-III synthase [Bacillus cereus G9842]
gi|228902992|ref|ZP_04067132.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis IBL
4222]
gi|228967566|ref|ZP_04128592.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|74492559|gb|EAO55706.1| Uroporphyrinogen-III synthase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218545013|gb|ACK97407.1| uroporphyrinogen-III synthase [Bacillus cereus G9842]
gi|228792145|gb|EEM39721.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228856668|gb|EEN01188.1| Uroporphyrinogen III synthase HEM4 [Bacillus thuringiensis IBL
4222]
Length = 250
Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL + SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLHMEGMSHRQIQHIEGQLHSYDWVIFTSRNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQKVLF-TPQK 117
++ + + P+ A + + +A+ E+ + + +
Sbjct: 69 VAFFLDSLNKKLPLTIKIAAVGVKTKLELEKRGYQVHFVPTSFVAEAFAEEFLKELSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYAR 175
+++ G L E + L + Y ++ + + L D I F +
Sbjct: 129 RILFPKGNIAREVIPVALREIGVSLDELIVYGTKVNIEKKQELIAALKLGKVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ V V +LL+
Sbjct: 189 STVTSFVRLLEGANWREWTKKCTIACIGPITEKEASRY-FPSVIVPKEYTVEALLQC 244
>gi|170783139|ref|YP_001711473.1| putative uroporphyrin-III c-methyltransferase/uroporphyrinogen-III
synthase [Clavibacter michiganensis subsp. sepedonicus]
gi|169157709|emb|CAQ02911.1| putative uroporphyrin-III c-methyltransferase/uroporphyrinogen-III
synthase [Clavibacter michiganensis subsp. sepedonicus]
Length = 279
Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 84/239 (35%), Gaps = 13/239 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAIT 55
+++ R ++ G PV+ P+ F +++ L S+ + +T
Sbjct: 13 RVLVPRGGPWGDGVAYDLRAQGATPVVAPMINFAATQDAQALESALADLAAGSFDWLTVT 72
Query: 56 SSESLSTLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ--K 110
S+ ++ L ++ T I A+GE +A G+T F +S A ++ E
Sbjct: 73 SATTVDVLASHRAVVPEGTRIAAVGETTAAALVAAGYTVDFVPSIDSSATA-LLEEWTEM 131
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-DA 169
+P++ ++ L + D LI +R + Y + + + +++ A
Sbjct: 132 AAGSPRRRVLTLRSEIAKPTLTDGLIARGHDVRSVVAYRTVGVPVSDRIREDVSSGRVRA 191
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
IL + S C+ A V VA SL++ L
Sbjct: 192 ILVTSGSVAEQVHEQLGDVPDGVLIACIGPRTAKDARRFGVRVDVVATERSAASLIQSL 250
>gi|212633295|ref|YP_002309820.1| Uroporphyrinogen III synthase HEM4 [Shewanella piezotolerans WP3]
gi|212554779|gb|ACJ27233.1| Uroporphyrinogen III synthase HEM4 [Shewanella piezotolerans WP3]
Length = 242
Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 63/242 (26%), Gaps = 12/242 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSS 57
M +++TRP + +E + + PL + + + I S+
Sbjct: 1 MKVLLTRPEGRNQLMEEALSFRNVSYLTTPLLQVTPTSNLQSTQVSSTLAHADIIIFIST 60
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLAR---QKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ P A A Q DN ++ +
Sbjct: 61 NAVKFASEAIAARWPESAKYYAVGQATYLALQALDISAEKAPDNCQQTEGLLSLPSLKSV 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
K ++ + G L + L + Y + + Q+ I+
Sbjct: 121 DDKNIVIVRGVGGREDLAIELTKRNANLAYWEVYQRGCPELDMSNICQQWQSFGIDTIII 180
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + + S+ + A VT A ++L L
Sbjct: 181 TSGEILDNLVKTVPNELFAWLQTCHIIVPSSRVYDKATAYGLITVTNAKAANTNAMLTAL 240
Query: 229 PL 230
L
Sbjct: 241 SL 242
>gi|225715118|gb|ACO13405.1| Uroporphyrinogen-III synthase [Esox lucius]
Length = 261
Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 76/258 (29%), Gaps = 28/258 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M++++ + P + + +++ G+ ++P+ F +V L +G +
Sbjct: 1 MHVLLLKEPREGGSGSDPYIKELASHGHKATLIPVLSFKFVSLNVLSDKLFRPDKHGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV-- 111
TS ++ + H + K + + +I +
Sbjct: 61 FTSPRAVEAVKMCLEEHGQMEEWNSNMRDKWNAKSVYVVGKATAALVENLGLIPLGEDTG 120
Query: 112 ------------LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
T PL + G + L ++ +PL + Y + E
Sbjct: 121 TADVLSRLIIEREDTSILPLFFPCGSIKREVLPTALKKNGVPLETLTVYQTVQHPDLEKN 180
Query: 160 MKNLLQNADAIL---FYARSSVLYFFS----LPLPAKISAAFLCLSNNIASAIPASYKNV 212
+KN F++ S V + L F + A A+ + +V
Sbjct: 181 LKNHFTEQGVPASVAFFSPSGVKFCLETVRRLSGERLNQIKFAAIGPTTADAMIEAGLSV 240
Query: 213 VTVACFPKETSLLKLLPL 230
A P L +
Sbjct: 241 SCSAEKPTAEHLATGIAK 258
>gi|320333062|ref|YP_004169773.1| uroporphyrin-III C-methyltransferase [Deinococcus maricopensis DSM
21211]
gi|319754351|gb|ADV66108.1| uroporphyrin-III C-methyltransferase [Deinococcus maricopensis DSM
21211]
Length = 490
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 72/227 (31%), Gaps = 21/227 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
+V+TR + ++ G V +PL + + L+ +Y + +TS+
Sbjct: 254 RVVVTRTREGNSDLAGVLRARGADVVELPLIRYAPSGDLPTLYRTLSQLGTYSWVLLTSN 313
Query: 58 ESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ L + A+G A+A + G F
Sbjct: 314 HAVEELFRQLDEMGLDARAFGAARVAAVGPATARALERHGIRPDFTPGTPGAAHLG---- 369
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ + +++L E+ L + ++ Y ++ + ++ L++AD
Sbjct: 370 GDLPASADARILHLASHIAEDALEEALGARGLNAERVELYRTEPAEPTDAELQA-LRDAD 428
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTV 215
+ + S+ L + A A+ VTV
Sbjct: 429 VVTLASGSAARALADLAGTDF---PVAVMGPQTERAARAAGFTHVTV 472
>gi|260464234|ref|ZP_05812427.1| Uroporphyrinogen III synthase HEM4 [Mesorhizobium opportunistum
WSM2075]
gi|259030037|gb|EEW31320.1| Uroporphyrinogen III synthase HEM4 [Mesorhizobium opportunistum
WSM2075]
Length = 238
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 15/240 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP A RT ++ + G+ P+++PL+ + A+A+TS+ ++
Sbjct: 4 VLVTRPEPGASRTARRVLEAGFQPILLPLTETAALPAD-AGQVPADALAVAVTSANAVRH 62
Query: 63 LPANFC---RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
P A+G+ +A AR GF + G + A+ + E + +
Sbjct: 63 ASEEIIAALAALPCHAVGKRTAEAARGAGFLSVREGPGD----AEALAENMGDAFSGRTI 118
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSS 177
+YL G+ R FE L + + ++ Y + + + + L +L Y+ +
Sbjct: 119 VYLCGRVRFPVFEQRLEAAGVQVHAVETYDTSAVRCSDGDVLALTSGQPVDAVLLYSAKA 178
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
L + FL LS IA+A+ S + +A P E +LL LL R
Sbjct: 179 AAAMQVLAARPALKLLFEKTRFLVLSQRIAAALDYSAGKAIEIAATPDEDALLALLRAPR 238
>gi|148271776|ref|YP_001221337.1| hypothetical protein CMM_0597 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829706|emb|CAN00622.1| hemD [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 279
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 85/239 (35%), Gaps = 13/239 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAIT 55
+++ R ++ G PV+ P+ F +++ L S+ + +T
Sbjct: 13 RVLVPRGGPWGDGVAYDLRAQGATPVVAPMINFAATQDAQALESALADLAAGSFDWLTVT 72
Query: 56 SSESLSTLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ--K 110
S+ ++ L ++ T I A+GE +A G+T F +S A ++ E
Sbjct: 73 SATTVDVLASHRAVVPEGTRIAAVGETTAAALVAAGYTVDFVPSIDSSATA-LLEEWTEM 131
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-DA 169
+P++ ++ L + D LI +R + Y + + + +++ A
Sbjct: 132 AAGSPRRRVLTLRSEIAKPTLTDGLIARGHDVRSVVAYRTVGVLVSDRIREDVSSGRVRA 191
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
IL + S C+ A S V VA SL++ L
Sbjct: 192 ILVTSGSVAEQVHEQLGDVPDGVLIACIGPRTAKDARRSGVRVDVVASERSAASLIQAL 250
>gi|301055970|ref|YP_003794181.1| uroporphyrinogen-III synthetase [Bacillus anthracis CI]
gi|300378139|gb|ADK07043.1| uroporphyrinogen-III synthetase [Bacillus cereus biovar anthracis
str. CI]
Length = 250
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 75/237 (31%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
++ITR +A + +++ IP+ +PL SY + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKEKSGIPLEIPLLRMEGMSHRQIQHIAGQLHSYDWVIFTSKNG 68
Query: 60 LSTLPANFCRHTPIFAIGEASA-CLARQKGFTQIFHGKDNSINLAKIIVEQK-VLFTPQK 117
++ + P+ A + + +A++ E+ + +
Sbjct: 69 VAFFLDRLRQKLPVTTKIAAVGVKTKLELEKRGYEVDFVPTSFVAEVFAEEFVKRLSGNE 128
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYAR 175
+++ G L + + L + Y +++ + + +L + D I F +
Sbjct: 129 CILFPKGNLARDVIPVALRKIGVSLDELIVYGTKENVEKKRELIEVLEAEEVDIITFTSP 188
Query: 176 SSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+V F L C+ + Y V + +LL+
Sbjct: 189 STVTSFVHLLEGTNWREWTKKCTIACIGPITEKEA-SLYFPHVIMPKEYTVEALLQC 244
>gi|73998990|ref|XP_854192.1| PREDICTED: similar to Uroporphyrinogen-III synthase (UROS)
(Uroporphyrinogen-III cosynthetase) (Hydroxymethylbilane
hydrolyase [cyclizing]) (UROIIIS) [Canis familiaris]
Length = 264
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 74/251 (29%), Gaps = 27/251 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + P + ++ G+ ++P+ F F L+ + YG +
Sbjct: 1 MKVLLLKDPKEDDCGQDPYIRELGLYGFEATLIPVLSFEFLSLPSFSEKLSHPEGYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKD-------------NSI 100
TS ++ + + + K + + N
Sbjct: 61 FTSPRAVEAVELCLEKDNKTEVWKHSLKEKWNAKTVYVVGNATASLVNKIGLDAEGANCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ +P PL++ G + L + IP+ I Y + +
Sbjct: 121 NAEKLAEYICSRESPALPLLFPCGTVKGEILPQMLKDRGIPMESITVYQKVPHPGIQVNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + + A A+ A V
Sbjct: 181 NSYYAKQGIPASITFFSPSGLAYSLKHIQELSGDNIDRIKFAAIGPSTARALAAQGLPVS 240
Query: 214 TVACFPKETSL 224
A P L
Sbjct: 241 CTAESPTPQGL 251
>gi|212213520|ref|YP_002304456.1| uroporphyrinogen-III synthase [Coxiella burnetii CbuG_Q212]
gi|212011930|gb|ACJ19311.1| uroporphyrinogen-III synthase [Coxiella burnetii CbuG_Q212]
Length = 268
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 84/257 (32%), Gaps = 30/257 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-------ESVFLAM---------- 45
I+ITRP + ++ I++ G ++ P S
Sbjct: 11 IMITRPEGQGELLKKAIERRGGAVILFPTLIIKPINKCNYSPFASASFPPSRESGSPDDK 70
Query: 46 ------QQSYGAIAITSSESLSTLPANFCR-HTPIFAIGEASACLARQKGFTQIFHGKDN 98
S + S+ ++ P + + AIG +A Q+G + +
Sbjct: 71 MTKAGFLNSSDILIFLSANAVKHSPILNFKAEQKLVAIGTGTAAALFQRGLSVDAVPEHF 130
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
S ++ + K + G+ + + LI + I Y + +
Sbjct: 131 SS--EGLLDLPLLHQVTGKTIAIFCGENSRPYLGNELIHRGANVFSIITYRREKPVVNKK 188
Query: 159 TMKNLLQNA-DAILFYARSSVLYFFSLP---LPAKISAAFLCLSNNIASAIPASYKNVVT 214
T+ L AI+ + S+ +L + +S + + + ++V
Sbjct: 189 TIDALTHQTLHAIVSTSAESLQNLCTLFESHQHWLHRIPLVVISKRMENLAKSQGFHLVL 248
Query: 215 VACFPKETSLLKLLPLR 231
+A P E +++K+L +
Sbjct: 249 LADNPGEKAIIKVLSTK 265
>gi|297687617|ref|XP_002821304.1| PREDICTED: uroporphyrinogen-III synthase-like [Pongo abelii]
Length = 265
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 72/251 (28%), Gaps = 27/251 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + + +++ G ++P+ F F L+ + YG +
Sbjct: 1 MKVLLLKDAKEDDCGQDPYIRELELYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ ++ + K + + +
Sbjct: 61 FTSPRAVEAAELCLEKNNKTEVWKRSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ + PL++ G + L + I + I Y + + +
Sbjct: 121 NAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTIPHPGIQGNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + A A+ A V
Sbjct: 181 NSYYSQQGVPASITFFSPSGLTYSLKHIQELSGNNIDQIKFAAIGPTTARALAAQGLPVS 240
Query: 214 TVACFPKETSL 224
A P +L
Sbjct: 241 CTAESPTPQAL 251
>gi|134046271|ref|YP_001097756.1| uroporphyrinogen-III synthase [Methanococcus maripaludis C5]
gi|132663896|gb|ABO35542.1| uroporphyrinogen-III synthase [Methanococcus maripaludis C5]
Length = 244
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 70/244 (28%), Gaps = 27/244 (11%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +VITRP++K E ++ G+ +++P + + Y I TS +
Sbjct: 1 MKVVITRPLEKGKDFSEMLENAGFGTIIIPTLELVF---KKAEINLEKYSWIVFTSPRGI 57
Query: 61 STLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
N + + +K F + + + ++ +
Sbjct: 58 EGFFKNLTSKDIEKVLTKKIGAIGIETAKEFEKIFKKPVYVIPDLYTAENLLEALEKQVK 117
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---------LLQ 165
P + ++ +++ + +I Y S++ ++
Sbjct: 118 PGEGVLVPTTPSTRD-----VLKEGLNADLIFVYSSEEPENISKKLEELEKQVISENKNN 172
Query: 166 NADAILFYARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + + FF P + + + + + + +
Sbjct: 173 KKVILTFTSGLTAKNFFKHCRPEFLELLKEQHVVSIGPITKKNVDSFGFDSLMPEKNYTV 232
Query: 222 TSLL 225
+L
Sbjct: 233 EGML 236
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 5/74 (6%)
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTV-AC 217
L+ I+F + + FF I + A +K V V
Sbjct: 42 NLEKYSWIVFTSPRGIEGFFKNLTSKDIEKVLTKKIGAIGIETAKEFEKIFKKPVYVIPD 101
Query: 218 FPKETSLLKLLPLR 231
+LL+ L +
Sbjct: 102 LYTAENLLEALEKQ 115
>gi|297182920|gb|ADI19069.1| uroporphyrinogen-III synthase [uncultured delta proteobacterium
HF0070_15B21]
Length = 270
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 67/248 (27%), Gaps = 22/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
I++TR E + ++G + PL + TS
Sbjct: 15 RILVTREEGPDHSLSESLIQLGAQVHIHPLISIQPPDSWDSFDQQINHINQIDWLVFTSR 74
Query: 58 ESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ L + I IG A+A Q+G +I E
Sbjct: 75 NGVIFTFQRLAELNLLNEIFQSVRIACIGPATAEALLQEGLETDLIPGLYQS--EGLIQE 132
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQN 166
+ + + + + ++ LI+ + Y ++ + + L+
Sbjct: 133 FQKMKPDGLCIWLVQAEAPRSILQEELIKMNAEVVTSTVYCNRMPQMDFSPLLELIRLKK 192
Query: 167 ADAILFYARSSVLYFFSLPLPAKISA-----AFLCLSNNIASAIPASYKNVVTVACFPKE 221
D I+F + S+V S+ CL +A NV
Sbjct: 193 LDWIVFASASAVKNLSSIIPKEWGKTWSSNLKVACLGEITKNAAMEQGLNVEVEPEVQNF 252
Query: 222 TSLLKLLP 229
L +
Sbjct: 253 EHLTMAIS 260
>gi|159900066|ref|YP_001546313.1| uroporphyrinogen III synthase HEM4 [Herpetosiphon aurantiacus ATCC
23779]
gi|159893105|gb|ABX06185.1| Uroporphyrinogen III synthase HEM4 [Herpetosiphon aurantiacus ATCC
23779]
Length = 266
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 23/245 (9%), Positives = 56/245 (22%), Gaps = 18/245 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
IV+TR ++ + + G + + + L+ + + + TS+
Sbjct: 11 RIVLTRAREQMTEFAQLLADHGAETLYCSAIQTLPPDDWQPFDRALSQIEGFDWMIATST 70
Query: 58 ESLSTLPAN-----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ + A + +
Sbjct: 71 NAVRAFFERYGVLGLPCNALNQLKIAAIGKATAKLLTDFGHAPDFVPHAYVAEQFLVEFQ 130
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK-NLLQNADAIL 171
+ + + LIE + + Y + + Q D +
Sbjct: 131 DIAGQRIFLPQADIARPLLREALIERGADVTAVVAYRTVPDPQVVALAELLRQQRVDVVT 190
Query: 172 FYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F + S+V Y + + +V A
Sbjct: 191 FTSSSTVRYTIEALHAAGMRNSQEFLNQTIIATIGPITSQTALDVGLHVDIEAAEHSTQG 250
Query: 224 LLKLL 228
L++ L
Sbjct: 251 LVEAL 255
>gi|291409997|ref|XP_002721286.1| PREDICTED: uroporphyrinogen III synthase [Oryctolagus cuniculus]
Length = 265
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 70/257 (27%), Gaps = 27/257 (10%)
Query: 1 MYIVITR-PIKKA---LRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + A ++ G ++P+ F F L + YG +
Sbjct: 1 MKVLLLKDAKDDACGQDPYVRELGLHGLEATLIPVLAFEFLSLPSFSEKLCRPEDYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLAR------------QKGFTQIFHGKDNSIN 101
TS ++ + + + +
Sbjct: 61 FTSPRAVEAAQLCLEKSSKAEVWERSLREKWNVKSVYVVGGATASRVSRIGLRADGEHSG 120
Query: 102 LAKIIVEQ-KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
A+ + E + PL++ G + L E +P+ I Y + +
Sbjct: 121 TAEKLAEYICSKESSPLPLLFPCGTLKREVLPTVLKEQGVPMESITVYETVPHPGIRGNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L + F + A A+ A V
Sbjct: 181 DSYYSKQGVPDSVAFFSPSGVKYSLKHIEELSGDSVGQIKFAAIGPTTARALAAQGLRVS 240
Query: 214 TVACFPKETSLLKLLPL 230
A P +L L
Sbjct: 241 CTAESPTPQALAAGLRK 257
>gi|149689590|ref|XP_001490208.1| PREDICTED: similar to Uroporphyrinogen-III synthase (UROS)
(Uroporphyrinogen-III cosynthetase) (Hydroxymethylbilane
hydrolyase [cyclizing]) (UROIIIS) [Equus caballus]
Length = 264
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/255 (13%), Positives = 78/255 (30%), Gaps = 27/255 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + P + ++ G+ ++P+ F F L+ + YG +
Sbjct: 1 MKVLLLKDPKEDDRGQDPYIRELGLYGFEATLIPVLSFEFLSLPSFSEKLSHPEGYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ + + ++ K + + +N
Sbjct: 61 FTSPRAVEAVELCLEKDNKTEVWEKSLREKWNAKSVYVVGNATASLVNKIGLDTEGENCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ + PL++ G + L + IP+ I Y + +
Sbjct: 121 NAEKLAEYICSRESSALPLLFPCGTLKGEILPKMLKDKGIPMESITVYQKIPHPGIQANL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L + F + A A+ A V
Sbjct: 181 NSYYSQQGVPASITFFSPSGLTHSLKHIQELSGDSIDQIKFAAIGPTTARALAAQGLPVS 240
Query: 214 TVACFPKETSLLKLL 228
A P ++L +
Sbjct: 241 CTAESPTPSALAAGI 255
>gi|225631174|ref|ZP_03787878.1| uroporphyrinogen-III synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591131|gb|EEH12309.1| uroporphyrinogen-III synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 235
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 87/237 (36%), Gaps = 15/237 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I++TRP+ + T+ ++K GY + P+ + + + + TS S
Sbjct: 1 MKSILLTRPLLDSFNTRNILRKYGYKVFIEPVFTIKYLNPDI---SAYEFDVVISTSKNS 57
Query: 60 LSTLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ PI +G ++ A+ GF+ I N L I
Sbjct: 58 VKAFSQICKEDDFPIITVGNSTMQAAKNLGFSDIISADSNVDGLISFIKAHYSNAI---K 114
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL--FYARS 176
+Y+ G+ + + L E +R + Y + KNLL + F++
Sbjct: 115 FLYIRGQEVSCDLKKRLSEEDFNVREVVLYKTIIKRSLTNRCKNLLLDGKIGSVAFFSSQ 174
Query: 177 SVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F SL L + + + +S NIA ++ + + P SL+ ++
Sbjct: 175 TARVFGSLVLKSGLSHVMNNTVAYTMSKNIADSLKLIKWKKIITSRLPTGESLIDII 231
>gi|225020273|ref|ZP_03709465.1| hypothetical protein CORMATOL_00276 [Corynebacterium matruchotii
ATCC 33806]
gi|224947017|gb|EEG28226.1| hypothetical protein CORMATOL_00276 [Corynebacterium matruchotii
ATCC 33806]
Length = 248
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 67/226 (29%), Gaps = 15/226 (6%)
Query: 7 RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE------SVFLAMQQSYGAIAITSSESL 60
R +++ +++ G + +P + + + +Y + TS+ ++
Sbjct: 2 RSPEQSHSLITRLETYGAEVISIPTIRIVPPVDLTQLHHAARQLRAGTYEWVVFTSANAV 61
Query: 61 STLPA----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN---LAKIIVEQKVLF 113
+ T + +G A+A +AR + N L +
Sbjct: 62 RCIAERMTGPLNSQTRVATVGRATARVARHYHLDPVLQPPITRQNALGLVEAFEPANSRS 121
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--IL 171
++ ++ D L + I Y + P + +LL I
Sbjct: 122 EERRKILVPHANIAPSTLVDGLKSQGWIVDDIIGYRTILADPPPPNIHDLLVTGQITAIC 181
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
+ S++ ++ C+ + +A NV V
Sbjct: 182 ITSGSTIRNLITIAGRPHPQTLLACIGPSAEAATKKLGLNVAVVPE 227
>gi|168178319|ref|ZP_02612983.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum NCTC 2916]
gi|182670305|gb|EDT82279.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum NCTC 2916]
Length = 486
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/240 (14%), Positives = 73/240 (30%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++A + ++ +G + + ES+ L + Y IA+TS +
Sbjct: 251 NICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNTEESLKPYLNRLKEYDYIALTSVNA 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLA------RQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A + + K + E K
Sbjct: 311 VKIFFDYLIKENIDIRNINAKFAAIGPATSEEIRMRGIMPSIKSKHFVAESLFEEMKKHI 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++ K D L + K + + Y + E+ ++AD +LF
Sbjct: 371 QRGDKILVPRSKEARPFLVDALKKEKCIVDEVHIYETLC---GESVHTERFEDADTVLFT 427
Query: 174 ARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ S+V S+ I + + A + + ++ ++ L +
Sbjct: 428 SPSTVRNMISMVGIDSIKEKNIIAIGPITAEELDKNNIKC-SICDEYSMGGIIDKLLEIK 486
>gi|322514004|ref|ZP_08067078.1| uroporphyrinogen-III synthase [Actinobacillus ureae ATCC 25976]
gi|322120154|gb|EFX92115.1| uroporphyrinogen-III synthase [Actinobacillus ureae ATCC 25976]
Length = 254
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 69/244 (28%), Gaps = 18/244 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M ++ITRP + + + + + PL E L + + S
Sbjct: 1 MNVLITRPDHRGQELVDMLNQHQIFAIHQPLFTIEAGTELPQLPSVMARLNAGDYVFAVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA------KIIVEQK 110
+++ A + + + +Q + +++ +
Sbjct: 61 KQAIDFASATLEQTGFHYRADLNYFAVGQQSAQYFSSRSEQPVRYPIVSENSDGLLLLDE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K L+ L + + + ++ ++CY + + E D
Sbjct: 121 MQDLNGKNLLILRAETGRDLLAETAVSRGAEVQYLECYRRKYVEENIVEKISLCKRVGVD 180
Query: 169 AILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNV--VTVACFPKET 222
I+ + + + + +S IA+ V ++
Sbjct: 181 TIVVTSGDILTTLYEQTAEEDRGWLSECRLIVVSQRIANMAYKLGWEQNSVILSEKADNN 240
Query: 223 SLLK 226
SLL+
Sbjct: 241 SLLE 244
>gi|229593300|ref|YP_002875419.1| uroporphyrinogen-III synthase [Pseudomonas fluorescens SBW25]
gi|229365166|emb|CAY53423.1| uroporphyrinogen-III synthase [Pseudomonas fluorescens SBW25]
Length = 252
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 74/240 (30%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSS 57
+++TRP ++++ + + G +PL + Y A+ + S
Sbjct: 5 RVLLTRPAEESMALAASLSEAGIFSSSLPLLDIEPLPVTPEQQAVFRDLGRYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLAR----QKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + P A A+ Q D+S L ++ ++ +
Sbjct: 65 PAARLAVQQLGQAWPHLRWFSVGAATAQVLAEHGLNVQYPPTGDDSEALLQLPALREAIA 124
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAIL 171
P ++ L G+ + L E + ++ Y AY + L+ + ++
Sbjct: 125 PPHARVLILRGEGGRELLAERLREQGASVDYLELYRRLLPAYDAGVLMQRIQLERLNGLV 184
Query: 172 FYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ L+ +L P S + A+ V +LL +
Sbjct: 185 VSSGQGFLHLQALAGPDWPQVAQLPLFVPSPRVQEMARAAGAEKVVDCRGASAAALLVAI 244
Score = 41.3 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 24/80 (30%)
Query: 152 DIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKN 211
+ + + L A++ ++ + A + + A + N
Sbjct: 41 PVTPEQQAVFRDLGRYCAVIVVSKPAARLAVQQLGQAWPHLRWFSVGAATAQVLAEHGLN 100
Query: 212 VVTVACFPKETSLLKLLPLR 231
V +LL+L LR
Sbjct: 101 VQYPPTGDDSEALLQLPALR 120
>gi|330507064|ref|YP_004383492.1| uroporphyrinogen III synthase/methyltransferase [Methanosaeta
concilii GP-6]
gi|328927872|gb|AEB67674.1| uroporphyrinogen III synthase/methyltransferase [Methanosaeta
concilii GP-6]
Length = 501
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 74/248 (29%), Gaps = 24/248 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI--HDRESVFLAMQQSYGAIAITSSES 59
I I RP + + + ++ G+IP+ P E + L + +A TS+
Sbjct: 245 RIAILRPAGQQEESVDLAERYGFIPLSAPAIALERNPLPEDL-LERIAAAECVAFTSANG 303
Query: 60 LSTL-----PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + I +IG + + +S L +++
Sbjct: 304 VHIALGNKAISRALAAKKIVSIGPKTKQALNEYDIQSEMPESYSSEGLERMLK------G 357
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE-TTMKNLLQNADAILFY 173
K +++L + + D L E I + I Y + + P + D F
Sbjct: 358 RYKSILFLRSAQGSQYLSDGLREAGIVVDDIPLYGVVNSSDPRLDRLIERAGEVDIFAFT 417
Query: 174 ARSSVLYFFS---------LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ S+ A A + A + V + ++
Sbjct: 418 SSSTARNLLERARAMGREEQLREALARATVAAIGKPTAQELSRLGVAVDVIPENFTFEAM 477
Query: 225 LKLLPLRR 232
L L R+
Sbjct: 478 LAALVGRK 485
>gi|291288799|ref|YP_003505615.1| Uroporphyrinogen III synthase HEM4 [Denitrovibrio acetiphilus DSM
12809]
gi|290885959|gb|ADD69659.1| Uroporphyrinogen III synthase HEM4 [Denitrovibrio acetiphilus DSM
12809]
Length = 227
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 75/233 (32%), Gaps = 13/233 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TR +K EK++ G P +P+ + Y TS S
Sbjct: 1 MNVLVTREEEKYQILAEKMKAFGLTPFSLPMIECSPVGAIIT----GEYDYAVFTSLNSA 56
Query: 61 STLPANFCR--HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ R + A+G ++A + S K + K
Sbjct: 57 KYFKPHISRVTINKVVAVGPSTAAALLDIDIKTDIMPETFSAEGMKELFAT--EDVEGKK 114
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARS 176
++ G K R F +YL ++ Y +Q + YP ++ L D + F + S
Sbjct: 115 FLFAGAKVRAGDFHEYLRGRGAEPVMVATYQTQPVKYPPGYIEAFLKENKIDIVTFASPS 174
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + I +C+ A + + +++L+
Sbjct: 175 AARAMLADIQ--HIDQQIVCIGKTTADEVRFLGYDS-RYPDDYTLDWMVRLIK 224
>gi|153206966|ref|ZP_01945784.1| uroporphyrinogen-III synthase [Coxiella burnetii 'MSU Goat Q177']
gi|154707465|ref|YP_001425475.1| uroporphyrinogen-III synthase [Coxiella burnetii Dugway 5J108-111]
gi|212219571|ref|YP_002306358.1| uroporphyrinogen-III synthase [Coxiella burnetii CbuK_Q154]
gi|120577039|gb|EAX33663.1| uroporphyrinogen-III synthase [Coxiella burnetii 'MSU Goat Q177']
gi|154356751|gb|ABS78213.1| uroporphyrinogen-III synthase [Coxiella burnetii Dugway 5J108-111]
gi|212013833|gb|ACJ21213.1| uroporphyrinogen-III synthase [Coxiella burnetii CbuK_Q154]
Length = 268
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 85/257 (33%), Gaps = 30/257 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-------ESVFLAM---------- 45
I+ITRP + ++ I++ G ++ P S
Sbjct: 11 IMITRPEGQGELLKKAIERRGGAVILFPTLIIKPINKCNYSPFASASFPPSRESGSPDDK 70
Query: 46 ------QQSYGAIAITSSESLSTLPANFCR-HTPIFAIGEASACLARQKGFTQIFHGKDN 98
S + S+ ++ P + + AIG +A Q+G + +
Sbjct: 71 MTKAGFLNSSDILIFLSANAVKHSPILNFKAEQKLVAIGTGTAAALFQRGLSVDAVPEHF 130
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
S ++ + K + G+ + E+ LI + I Y + +
Sbjct: 131 SS--EGLLDLPLLHQVTGKTIAIFCGENSRPYLENELIHRGANVFSIITYRRERPVVNKK 188
Query: 159 TMKNLLQNA-DAILFYARSSVLYFFSLP---LPAKISAAFLCLSNNIASAIPASYKNVVT 214
T+ L AI+ + S+ +L + +S + + + ++V
Sbjct: 189 TIDALTHQTLHAIVSTSAESLQNLCTLFESHQHWLHRIPLVVISKRMENLAKSQGFHLVL 248
Query: 215 VACFPKETSLLKLLPLR 231
+A P E +++K+L +
Sbjct: 249 LADNPGEKAIIKVLSTK 265
>gi|194041645|ref|XP_001925339.1| PREDICTED: uroporphyrinogen-III synthase isoform 2 [Sus scrofa]
gi|194041647|ref|XP_001925313.1| PREDICTED: uroporphyrinogen-III synthase isoform 1 [Sus scrofa]
Length = 265
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 80/264 (30%), Gaps = 32/264 (12%)
Query: 1 MYIVITR-PIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAI 52
M +++ + P + R ++ G ++P+ F F L+ + YG +
Sbjct: 1 MKVLLLKDPKEDDDRGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEGYGGL 60
Query: 53 AITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNS 99
TS ++ + + A + K + + +N
Sbjct: 61 IFTSPRAVEAVKLCLEKANKTEAWETSLKEKWNSKSVYVVGNATASLVSKIGLDPEGENC 120
Query: 100 INLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
N K+ + PL++ G + L + +P+ I Y + +
Sbjct: 121 GNAEKLAEYICSRESSALPLLFPCGNLKRETLPRMLKDKGVPMESITVYQTIPHPGIQGN 180
Query: 160 MKNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV 212
+ + F++ S S+ + L + F+ + A A+ A V
Sbjct: 181 LNSYYSQQGIPASITFFSPSGLSYSLKHIQELSGDSIDQIKFVAIGPTTARALAAQGLPV 240
Query: 213 VTVACFPKETSLLK----LLPLRR 232
A P +L L R
Sbjct: 241 SCTAESPTPRALAAGIRTALQPHR 264
>gi|117619183|ref|YP_855001.1| uroporphyrinogen-III synthase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560590|gb|ABK37538.1| uroporphyrinogen-III synthase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 244
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 70/239 (29%), Gaps = 10/239 (4%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSESLST 62
++ RP +A +++ G+ P+ PL + E L + + S +++
Sbjct: 4 LVVRPAAQAAELAALLRQHGHAPLCCPLLETVAGSELHRLPELLPQADIVIAVSVHAVNF 63
Query: 63 LPANFCRHTPIFAIGEASA---CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + + A A I + ++ + K +
Sbjct: 64 THHFLLQTGQTWPNIDYFAVGQASADAFSEVGIQALSPDDPRSEGLLALPSLQQVNGKQV 123
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSS 177
+ L G L + Y A + Q D++L +
Sbjct: 124 LILRGNGGRDLIARTLASRGALVHYCAAYERHYPALDGDALTCHWQAAGLDSLLVTSGEL 183
Query: 178 VLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ L ++ + S +A A+ +T+A +L L LR+
Sbjct: 184 LQRLLELVPDQQLPWLHDRLLVVPSPRVAEMAAAAGFTHITIAQGASNQALTAALELRK 242
>gi|226948194|ref|YP_002803285.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum A2 str. Kyoto]
gi|226842312|gb|ACO84978.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum A2 str. Kyoto]
Length = 486
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 70/236 (29%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++A + ++ +G + + E++ L + Y IA+TS +
Sbjct: 251 NICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNAEENLKPYLNRLKEYDYIALTSVNA 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLA------RQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A K + K + E K
Sbjct: 311 VKIFFDYLIKENIDIRNINAKFAAIGPATSEAIKVRGIMPSIKSKHFVAESLFEEMKKHV 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++ K D L + + + Y + ++AD +LF
Sbjct: 371 QSGDKVLVPRSKDARPFLVDALKKEGCIVDEVHIYETLCGQSS---HTERFEDADTVLFT 427
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V S+ I + + A+ + + ++ ++ L
Sbjct: 428 SPSTVKNMISMVGIDSIKEKSIIAIGPITAAELYKNNIEC-SICDEYSINGIIDKL 482
>gi|32033975|ref|ZP_00134231.1| COG1587: Uroporphyrinogen-III synthase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208483|ref|YP_001053708.1| putative uroporphyrinogen-III synthase [Actinobacillus
pleuropneumoniae L20]
gi|126097275|gb|ABN74103.1| putative uroporphyrinogen-III synthase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 254
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 71/244 (29%), Gaps = 18/244 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M ++ITRP + E + + + PL E L + + S
Sbjct: 1 MNVLITRPDYRGQELVEMLNQYQIFAIHQPLFTIEAGTELPQLPSVMSRLNTDDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + + + +S N ++ +
Sbjct: 61 KHAIDFASETLVQTGFQYRSDLKYFAVGRQSAAYFSTKTAYPTYYPISSENSEGLLELPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L + F + ++ ++CY Q +A E D
Sbjct: 121 MQCLEGKNILVLRAEKGRDFFAEQASLRGANVQYLECYRRQYLADSITEKMSLCKRAGID 180
Query: 169 AILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKET 222
+I+ + ++ + I + +S IA N V ++
Sbjct: 181 SIIVTSTDILITLYEQTAEDDRQWLIECRLIVVSTRIAQLAYKLGWSRNKVLLSEKADNN 240
Query: 223 SLLK 226
SLL+
Sbjct: 241 SLLE 244
>gi|161831413|ref|YP_001595908.1| uroporphyrinogen-III synthase [Coxiella burnetii RSA 331]
gi|161763280|gb|ABX78922.1| uroporphyrinogen-III synthase [Coxiella burnetii RSA 331]
Length = 268
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 85/257 (33%), Gaps = 30/257 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-------ESVFLAM---------- 45
I+ITRP + ++ I++ G ++ P S
Sbjct: 11 IMITRPEGQGELLKKAIERRGGAVILFPTLIIKPINKCNYSPFASASFPPSRESGSPDDK 70
Query: 46 ------QQSYGAIAITSSESLSTLPANFCR-HTPIFAIGEASACLARQKGFTQIFHGKDN 98
S + S+ ++ P + + AIG +A Q+G + +
Sbjct: 71 MTKAGFLNSSDILIFLSANAVKHSPILNFKAEQKLVAIGTGTAAALFQRGLSVDAVPEHF 130
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
S ++ + K + G+ + E+ LI + I Y + +
Sbjct: 131 SS--EGLLDLPLLHQVTGKTIAIFCGENSRPYLENELIHRGANVFSIITYRQERPVVNKK 188
Query: 159 TMKNLLQNA-DAILFYARSSVLYFFSLP---LPAKISAAFLCLSNNIASAIPASYKNVVT 214
T+ L AI+ + S+ +L + +S + + + ++V
Sbjct: 189 TIDALTHQTLHAIVSTSAESLQNLCTLFESHQHWLHRIPLVVISKRMENLAKSQGFHLVL 248
Query: 215 VACFPKETSLLKLLPLR 231
+A P E +++K+L +
Sbjct: 249 LADNPGEKAIIKVLSTK 265
>gi|296162268|ref|ZP_06845063.1| protein of unknown function DUF513 hemX [Burkholderia sp. Ch1-1]
gi|295887535|gb|EFG67358.1| protein of unknown function DUF513 hemX [Burkholderia sp. Ch1-1]
Length = 672
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 65/260 (25%), Gaps = 35/260 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+VITRP ++ ++ G + PL + L+ + Y + S
Sbjct: 20 VVITRPAGQSNELIARLAAAGIATLDFPLIDVAPVADEAPLRAALSSLERYALVVFVSPN 79
Query: 59 SLSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAK 104
++ A P A ++ + +
Sbjct: 80 AVDYAFARSDTIWPHALPIGVVGPGSVQALARHGVTSPAYNVISPPSGTDEETARFDSEG 139
Query: 105 IIVEQK----VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+ K ++ + G + L E + + Y
Sbjct: 140 LFAAIDTALGATNLEGKRVLIVRGDGGREWLAERLREAGAEVETVAAYRRLVPEPSIGGW 199
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPAS 208
+ + A L + V L AA + IA A
Sbjct: 200 ARVHELLAGVPHAWLLTSSEGVRNLHELAQDHLTADEISQLKRAALVTPHPRIAQTARAL 259
Query: 209 YKNVVTVACFPKETSLLKLL 228
+ +TV+ + +++ L
Sbjct: 260 GFDSITVS-GAGDERIVRTL 278
>gi|163797974|ref|ZP_02191916.1| Uroporphyrinogen-III synthase [alpha proteobacterium BAL199]
gi|159176768|gb|EDP61339.1| Uroporphyrinogen-III synthase [alpha proteobacterium BAL199]
Length = 243
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 88/235 (37%), Gaps = 12/235 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
++ITRP +A ++ G+ V+ P+ + L Y A A+TS +
Sbjct: 4 RVLITRPQAEAEALAAELTSRGHEAVIAPMLVIR--SAGIQLRDAARYQAAAVTSGNGVD 61
Query: 62 TL-PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
L A R P+FA+GEA+A A GF + + L +I + L P++
Sbjct: 62 GLASATARRALPVFAVGEATAERALALGFDPVTSAQGTGGALVDLI--RTTLHPANGPIL 119
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSV 178
+ G L + + Y ++ + + L + +LF++ +
Sbjct: 120 WASGDEVRVDLTTELGNRGFAVERVIVYRTEPVDRLSDAGLHALMDRSLGGVLFFSPRTA 179
Query: 179 LYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F L L A + A CLS IA + A + A P LL L
Sbjct: 180 ERFVRLVLEAGLDGQVTTMAAHCLSPPIADTVGALPWATIRTAARPTRDDLLATL 234
>gi|152981768|ref|YP_001352833.1| uroporphyrinogen-III synthase [Janthinobacterium sp. Marseille]
gi|151281845|gb|ABR90255.1| uroporphyrinogen-III synthase [Janthinobacterium sp. Marseille]
Length = 256
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 80/250 (32%), Gaps = 24/250 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+VITRP+ +A +++ ++G V+ PL + + L Y IA S
Sbjct: 5 VVITRPLAQADALAQRVTELGRKAVIFPLLEILPLDDQQSLRQALRELDQYALIAFVSPN 64
Query: 59 SLSTLP---ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK-----IIVEQK 110
++ ++ P+ +GE S + G T + +L + ++ E
Sbjct: 65 AIDAAFNARPDWPWQIPLAVVGEGSRMALLRHGATTGNSTIISPTDLERTDSQTLLAELD 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT---MKNLLQNA 167
+ K ++ + G+ D L + + + Y +K LL
Sbjct: 125 LPVLRGKQVLIIRGETGRELLGDTLRAAGVGVTPLAAYRRVAPELNNARRGELKRLLSCQ 184
Query: 168 DAILFYARSSVLYFFSLPLP--------AKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+ + + + + + + IA + +T+
Sbjct: 185 NDWIVTSSEGLRFLTEMVAQLDEAGSVAKMQQQRIIVSHVRIAETAQLLGFSNITLTRS- 243
Query: 220 KETSLLKLLP 229
+ LL L
Sbjct: 244 GDDGLLAALQ 253
>gi|254422230|ref|ZP_05035948.1| uroporphyrin-III C-methyltransferase domain protein [Synechococcus
sp. PCC 7335]
gi|196189719|gb|EDX84683.1| uroporphyrin-III C-methyltransferase domain protein [Synechococcus
sp. PCC 7335]
Length = 518
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 68/248 (27%), Gaps = 21/248 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
I++TR +A + + + K G + +P + + +++ + +TS
Sbjct: 259 ILVTRAASQASQFSQMLMKKGAQVIDLPALEIREPKSWKEMDYAIMALRTFDWLVLTSPN 318
Query: 59 SLSTLPANFCRHTPIFAIGEA------SACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+++ H + +A +VE
Sbjct: 319 AVNYFLDRLLHHGLDLRSLAHLKIAVVGKKTNGFLKQRGLAADFIPPSFVADSLVEHFPE 378
Query: 113 FTPQKPLIYLGGKP-RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADA 169
K L++ + + + + + Y S K +L+N DA
Sbjct: 379 APIDKKLLFPRVEKGGRDVLVKEMSQRGAVVIEVAAYESACPDSIPPAAKLVLENGTVDA 438
Query: 170 ILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
I F + +V +F L A + + V A
Sbjct: 439 ITFASSKTVRHFTQLMERTFGNEWLDRLNRVAIASIGPQTSRGCQQLLGRVTLEAKEYTL 498
Query: 222 TSLLKLLP 229
L+ L
Sbjct: 499 AGLIAGLE 506
>gi|300798369|ref|NP_001178298.1| uroporphyrinogen-III synthase [Bos taurus]
gi|297491069|ref|XP_002698611.1| PREDICTED: uroporphyrinogen III synthase [Bos taurus]
gi|296472551|gb|DAA14666.1| uroporphyrinogen III synthase [Bos taurus]
Length = 264
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 27/255 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIA 53
M +++ + P + ++ G ++P+ F L+ + YG +
Sbjct: 1 MKVLLLKDPKEDDCGQDPYVRELGLYGLEATLIPVLSFEFLSLPSLSEKLSHPEGYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ + + T ++ K + + +
Sbjct: 61 FTSPRAVEAVERCLQKDTKAEVWKKSLKEKWNAKSVYVVGNATASLVNRIGLHTEGETCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ PL++ G + L + IPL + Y + + +
Sbjct: 121 NAEKLAEYICSREPSALPLLFPCGTLKREILPKMLKDKGIPLESVTVYQTIPHPGIQGNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L + F+ + A A+ A V
Sbjct: 181 TSYYTQQGVPASITFFSPSGLTHSLKHIQELSGDSIGQIKFVAIGPTTAQALAAQGLPVS 240
Query: 214 TVACFPKETSLLKLL 228
A P +L +
Sbjct: 241 CTAESPTPRALAAGI 255
>gi|91782421|ref|YP_557627.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia xenovorans LB400]
gi|91686375|gb|ABE29575.1| Uroporphyrinogen III synthase HEM4 [Burkholderia xenovorans LB400]
Length = 672
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 65/260 (25%), Gaps = 35/260 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+VITRP ++ ++ G + PL + L+ + Y + S
Sbjct: 20 VVITRPAGQSNELIARLAAAGIATLDFPLIDVAPVTDEAPLRAALSSLERYALVVFVSPN 79
Query: 59 SLSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAK 104
++ A P A ++ + +
Sbjct: 80 AVDYAFARSDTIWPHALPIGVVGPGSVQALARHGVTSPAYNVISPPSGTDEETARFDSEG 139
Query: 105 IIVEQK----VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+ K ++ + G + L E + + Y
Sbjct: 140 LFAAIDTALGATNLEGKRVLIVRGDGGREWLAERLREAGAEVETVAAYRRLVPEPSIGGW 199
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPAS 208
+ + A L + V L AA + IA A
Sbjct: 200 ARVHELLAGAPHAWLLTSSEGVRNLHELAQDHLTADEISQLKRAALVTPHPRIAQTARAL 259
Query: 209 YKNVVTVACFPKETSLLKLL 228
+ +TV+ + +++ L
Sbjct: 260 GFDSITVS-GAGDERIVRTL 278
>gi|209516093|ref|ZP_03264953.1| protein of unknown function DUF513 hemX [Burkholderia sp. H160]
gi|209503553|gb|EEA03549.1| protein of unknown function DUF513 hemX [Burkholderia sp. H160]
Length = 663
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 68/253 (26%), Gaps = 34/253 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSE 58
+VITRP ++ + E+++ G + PL + A + Y + S
Sbjct: 13 VVITRPAGQSSQLVEQLEAAGLASLDFPLIDIAPVVDDAPLCEAFASLERYALVVFVSPN 72
Query: 59 SLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSIN----- 101
++ A P + A+ + + D S +
Sbjct: 73 AVDHAFARHDDIWPHALPIGVVGPGSVHALARHGVSAPEHRVISPAAGADDESTSFDSEG 132
Query: 102 -LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPETT 159
A I + K ++ + G + L E + V+ Y
Sbjct: 133 LFAAIEAQLGAASLAGKRVLIVRGDGGREWLAERLREAGAQVDVVAAYRRIVPEPSIGAW 192
Query: 160 MKNL---LQNADAILFYARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPAS 208
+ A L + V L A+ + IA A
Sbjct: 193 ARVHELLAGAPHAWLLTSSEGVRNLQELAQEHLTAGEIAQLKHASLVTPHPRIAQTARAL 252
Query: 209 YKNVVTVACFPKE 221
+ +TV+ E
Sbjct: 253 GFDRITVSGAGDE 265
>gi|320104820|ref|YP_004180411.1| uroporphyrin-III C-methyltransferase [Isosphaera pallida ATCC
43644]
gi|319752102|gb|ADV63862.1| uroporphyrin-III C-methyltransferase [Isosphaera pallida ATCC
43644]
Length = 530
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 72/258 (27%), Gaps = 30/258 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSY---FIHDRESVFLAMQ------QSYGAI 52
+V+TRP ++ +G + P+ + L + +
Sbjct: 270 RVVVTRPRADLAEASASLESLGAEAIAAPMVELGPVEPGPDRDRLDDALRRLAGGGFDWL 329
Query: 53 AITSSESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+TS+ + L + + AIG+A+A + +
Sbjct: 330 VLTSANGVRFLVERLDQLGLDLRALGRVRLAAIGQATARTLGEYYLRPDIAPESARS--- 386
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ + ++ D L E + + Y +D +
Sbjct: 387 EEFAQALRPQVAGCAVLLTRADRGRSLLPDQLAEVARVVENVWVYRHRDAEALPPGLAAR 446
Query: 164 LQ--NADAILFYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVA 216
L+ D + + ++ FF L P + +S A A V VA
Sbjct: 447 LETAEVDWVTLTSPATARRFFELVPPTARVHLGRTIRLAAISPLTAQACRDLGCEVAAVA 506
Query: 217 CFPKETSLLKLL--PLRR 232
L++ + R+
Sbjct: 507 EPFTWDGLIQAIIAAERK 524
>gi|83643193|ref|YP_431628.1| uroporphyrinogen-III synthase [Hahella chejuensis KCTC 2396]
gi|83631236|gb|ABC27203.1| Uroporphyrinogen-III synthase [Hahella chejuensis KCTC 2396]
Length = 260
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 74/246 (30%), Gaps = 19/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
+++TRP + + +++ ++P E+ + Y + S
Sbjct: 13 RVLLTRPQGENDSLRALLEQNSAEVRVLPAIAIEPLPETQAIKDCILDLDRYTHVICVSK 72
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQK---------GFTQIFHGKDNSINLAKIIVE 108
+ L + P G + G + L ++
Sbjct: 73 HASRLLLELIDAYWPQAPQGVRWFAIGESSAAPLRSYGLTVNTPEQGCASEQLLEHPGLQ 132
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ P ++ + G + + E + ++ Y + + Y + L+
Sbjct: 133 ARNEDEPPMRVLIVKGCGGRELLTETMQERGAHVATLELYERKTLEYDPNELNEALKQWR 192
Query: 169 --AILFYARSSVLYFFSLPLP---AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + ++L+ L A F+ S +A+ + +A + +
Sbjct: 193 PEVVVTLSGETLLHLCQLGQNIGYAWGDTLFVIPSARVATLAQENRL-NYKIAPELSDEA 251
Query: 224 LLKLLP 229
LL LL
Sbjct: 252 LLALLK 257
>gi|325262510|ref|ZP_08129247.1| porphyrin biosynthesis protein HemD [Clostridium sp. D5]
gi|324032342|gb|EGB93620.1| porphyrin biosynthesis protein HemD [Clostridium sp. D5]
Length = 512
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/253 (13%), Positives = 70/253 (27%), Gaps = 32/253 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ-------QSYGAIAIT 55
I+ITRP + + R K++ +G + +P + L + T
Sbjct: 257 ILITRPKQNSSRLAAKLRGLGAQVIELPSIVTETVSPNPVLKEALEKFGTRAKEEWLVFT 316
Query: 56 SSESLSTLPANFCRH-------------TPIFAIGEASACLARQKGFTQIFHGKDNSINL 102
S I AIG A+ + G +
Sbjct: 317 SPIGAEVFFGQLAEMKTDVRHLFKRPADIRIAAIGSATEKALQGYGLFPDLVPEVYCAGS 376
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
+ + + + K + L E + + I Y + + ++
Sbjct: 377 LGKALAEAAEPGSF--VTVVRAKVGSEELLPPLKEAGLEVEDIALYETLYKTHS--HIRE 432
Query: 163 LLQ------NADAILFYARSSVLYFFSLPL-PAKISAAFLCLSNNIASAIPASYKNVVTV 215
+ DA+ F + S+V F + +C+ A+ + +
Sbjct: 433 KITGLFEDGEIDAVTFTSASTVRGFVNAMELKDYSHILAVCIGEQTAAEAAKYNMQ-IRI 491
Query: 216 ACFPKETSLLKLL 228
A SL L+
Sbjct: 492 AEKASIDSLTDLI 504
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 15/164 (9%), Positives = 35/164 (21%), Gaps = 15/164 (9%)
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
A T LA + + + ++ K + L
Sbjct: 219 AAAKEAGIGTPAIILVGEVCGLADTFHWAEDRWLGGRQILITRPKQNSSRLAAKLRGLGA 278
Query: 141 PLRVIDCYYSQDIAYPETTMKN-----LLQNADAILFYARSSVLYFF----------SLP 185
+ + ++ ++ + + ++F + FF
Sbjct: 279 QVIELPSIVTETVSPNPVLKEALEKFGTRAKEEWLVFTSPIGAEVFFGQLAEMKTDVRHL 338
Query: 186 LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + A+ V SL K L
Sbjct: 339 FKRPADIRIAAIGSATEKALQGYGLFPDLVPEVYCAGSLGKALA 382
>gi|158337769|ref|YP_001518945.1| uroporphyrinogen III synthase/methyltransferase [Acaryochloris
marina MBIC11017]
gi|158308010|gb|ABW29627.1| uroporphyrinogen III synthase/methyltransferase [Acaryochloris
marina MBIC11017]
Length = 542
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 69/252 (27%), Gaps = 29/252 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
I++TR + ++ + + MG V MP L A + + +TS+
Sbjct: 286 ILVTRAVAQSKTFSQSLMSMGATVVDMPALEIGPPSSWKALDGAIASLDRFDWLILTSAN 345
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ I +G +A Q+G + + +A +VE
Sbjct: 346 GVTRFLDRLFHAGLDTRALASVKIAVVGRKTAKTLEQQGLKADYIPPN---FVADALVEH 402
Query: 110 KVLFTPQKP--LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
L L + + + Y S+ A + L+
Sbjct: 403 FPGEALTGQTLLFPRVESGGRDVLVKQLTQKGATVVEVAAYQSRCPATIAPQALHALRTQ 462
Query: 168 --DAILFYARSSVLYFFSLPLP---------AKISAAFLCLSNNIASAIPASYKNVVTVA 216
D + F + +V YF+ L + + V A
Sbjct: 463 TVDIVTFASSKTVRYFYQLLQQAVGEGKPQAWLTPLKVASIGPQTSLTCQELLGRVDIEA 522
Query: 217 CFPKETSLLKLL 228
L + +
Sbjct: 523 EEYTLDGLTQSI 534
>gi|237794218|ref|YP_002861770.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum Ba4 str. 657]
gi|229261127|gb|ACQ52160.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum Ba4 str. 657]
Length = 486
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 71/236 (30%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++A + ++ +G + + ES+ L+ + Y IA+TS +
Sbjct: 251 NICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNTEESLKSYLSKLKEYDYIALTSVNA 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLA------RQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A K + K + E K
Sbjct: 311 VKIFFDYLIKENIDIRNINAKFAAIGPATSEAIKMRGIMPSIKSKHFVAESLFEEMKRHI 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++ K D L E + + Y + T +NAD +LF
Sbjct: 371 QRGDKILVPRSKDARPFLVDALKEEGCIVDEVHIYETLCGKC---THTERFENADTVLFT 427
Query: 174 ARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V S+ I + + A+ + + + ++ L
Sbjct: 428 SPSTVKNMISMVGIDSIKEKNIIAIGPITAAELDKNNIECSSC-DEYSINGIIDKL 482
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 40/133 (30%), Gaps = 5/133 (3%)
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ + + + K + + L++ + I+ ++ + +
Sbjct: 237 DKLNWYEKKPLFGRNICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNTEESLKSYLSK 296
Query: 164 LQNADAILFYARSSVLYFF-----SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L+ D I + ++V FF I+A F + + AI +
Sbjct: 297 LKEYDYIALTSVNAVKIFFDYLIKENIDIRNINAKFAAIGPATSEAIKMRGIMPSIKSKH 356
Query: 219 PKETSLLKLLPLR 231
SL + +
Sbjct: 357 FVAESLFEEMKRH 369
>gi|168182771|ref|ZP_02617435.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum Bf]
gi|182673995|gb|EDT85956.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum Bf]
Length = 486
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 71/236 (30%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++A + ++ +G + + ES+ L+ + Y IA+TS +
Sbjct: 251 NICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNTEESLKSYLSKLKEYDYIALTSVNA 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLA------RQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A K + K + E K
Sbjct: 311 VKIFFDYLIKENIDIRNINAKFAAIGPATSEAIKMRGIMPSIKSKHFVAESLFEEMKRHI 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++ K D L E + + Y + T +NAD +LF
Sbjct: 371 QRGDKILVPRSKDARPFLVDALKEEGCIVDEVHIYETLCGKC---THTERFENADTVLFT 427
Query: 174 ARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V S+ I + + A+ + + + ++ L
Sbjct: 428 SPSTVKNMISMVGIDSIKEKNIIAIGPITAAELDKNNIECSSC-DEYSINGIIDKL 482
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 40/133 (30%), Gaps = 5/133 (3%)
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ + + + K + + L++ + I+ ++ + +
Sbjct: 237 DKLNWYEKKPLFGRNICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNTEESLKSYLSK 296
Query: 164 LQNADAILFYARSSVLYFF-----SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L+ D I + ++V FF I+A F + + AI +
Sbjct: 297 LKEYDYIALTSVNAVKIFFDYLIKENIDIRNINAKFAAIGPATSEAIKMRGIMPSIKSKH 356
Query: 219 PKETSLLKLLPLR 231
SL + +
Sbjct: 357 FVAESLFEEMKRH 369
>gi|254360509|ref|ZP_04976658.1| uroporphyrinogen-III synthase [Mannheimia haemolytica PHL213]
gi|153091049|gb|EDN73054.1| uroporphyrinogen-III synthase [Mannheimia haemolytica PHL213]
Length = 254
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 76/247 (30%), Gaps = 20/247 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M +++TR + + + + + PL +E ++ +S + + S
Sbjct: 1 MNVLVTRLDSRGQELVDMLNEQQIFAIHQPLFTIEAGKELPLLPSAISRLKSDDYVFVVS 60
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ +F FA+G+ +A +K + + N ++
Sbjct: 61 PNAVDYAAKTLVDTGFHFRSDLKYFAVGQRTAKYLTEKAEQAVIYP-IEFENSEGVLALP 119
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP-ETTMKNLLQ-NA 167
++ K ++ L + + ++ ++CY + + + +
Sbjct: 120 EMQNLTDKTILILRADSGRELLAETAVLRGATIQYLECYRREPVTDDIPEKISLCKRLGV 179
Query: 168 DAILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKN--VVTVACFPKE 221
D I+ + + + + +S IA + V+
Sbjct: 180 DTIVITSSEILRSLYEQAKADCRAWLFECDLVVVSRRIAKIAKQMGWQEDKIRVSDKADN 239
Query: 222 TSLLKLL 228
+L+ L
Sbjct: 240 VTLMNTL 246
>gi|332257469|ref|XP_003277827.1| PREDICTED: uroporphyrinogen-III synthase-like [Nomascus leucogenys]
Length = 265
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 71/251 (28%), Gaps = 27/251 (10%)
Query: 1 MYIVITRP--IKKA--LRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + ++ G ++P+ F F L+ + YG +
Sbjct: 1 MKVLLLKDGKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ ++ + K + + +
Sbjct: 61 FTSPRAVEAAELCLEKNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTAGETCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ + +PL++ G + L + I + I Y + + +
Sbjct: 121 NAEKLAEYICSRESSARPLLFPCGNLKREILPKALKDKGIAMESITVYQTIPHPGIQGNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + A A+ A V
Sbjct: 181 NSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVS 240
Query: 214 TVACFPKETSL 224
A P +L
Sbjct: 241 CTAESPTPQAL 251
>gi|309389758|gb|ADO77638.1| uroporphyrin-III C-methyltransferase [Halanaerobium praevalens DSM
2228]
Length = 530
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 68/267 (25%), Gaps = 41/267 (15%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
I++TRP +A E I+K P++ P L Y + TS
Sbjct: 255 NILVTRPAAQAGSILEMIEKEAGNPILSPTIAIKESENKEQLQKAVRNLDQYTHLIFTSV 314
Query: 58 ESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSI----NLAK 104
+ I IG +A Q G +D S +
Sbjct: 315 NGVRYFVKMLKAEKLDLRELAGIKIITIGSKTAAELNQNGIRADLMPEDYSTAGILKYLE 374
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM-KNL 163
+ + + + + + L E + I Y ++ +A + L
Sbjct: 375 SLEAKGEMNLKTSSFLLPRSNIAPKNLQKGLRELGAKVDNIIAYRTEAVALQAEIIDLLL 434
Query: 164 LQNADAILFYARSSVLYFFSLPLP-----------------------AKISAAFLCLSNN 200
D + F + S+V S C+
Sbjct: 435 NNELDLLTFSSSSTVENLISGIKNLTKNELVKSQLNLDQKTEADLLAKLKEIPAACIGPV 494
Query: 201 IASAIPASYKNVVTVACFPKETSLLKL 227
A+ NV VA L+
Sbjct: 495 TAAKAKEYNLNVQIVAAEYTIKGLMDA 521
>gi|304556623|gb|ADM35661.1| uroporphyrinogen III synthase erythroid variant [Felis catus]
Length = 261
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 27/257 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + P + ++ G ++P+ F S F L+ + YG +
Sbjct: 1 MKVLLLKDPKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLSSFSEKLSHPEGYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ + + + K + ++
Sbjct: 61 FTSPRAVEAVELCLEKDNKTEVWKHSLKEKWNAKSVYVVGSATSSLVNKIGLDTEGESCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ +P PL++ G + L + IP+ I Y + +
Sbjct: 121 NAEKLAEYICSRESPALPLLFPCGTVKGEILPKMLKDKGIPMESIIVYQKVPHPGIQVNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + + A A+ A V
Sbjct: 181 HSYYSQQGIPASITFFSPSGLTHSLKHIQELSGDNIGRIKFAAIGPSTARALAAQGLPVS 240
Query: 214 TVACFPKETSLLKLLPL 230
A P +L K L L
Sbjct: 241 CTAESPTPPALAKGLRL 257
>gi|303253600|ref|ZP_07339738.1| putative uroporphyrinogen-III synthase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248005|ref|ZP_07530034.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302647520|gb|EFL77738.1| putative uroporphyrinogen-III synthase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855403|gb|EFM87577.1| Uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 254
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 71/244 (29%), Gaps = 18/244 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M ++ITRP + E + + + PL E L + + S
Sbjct: 1 MNVLITRPDYRGQELVEMLNQYQIFAIHQPLFTIEAGTELPQLPSVMSRLNTDDYVFAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ R + + + +S N ++ +
Sbjct: 61 KHAIDFASETLVQTGFQYRSDLKYFAVGRQSAAYFSTKTAYPTYYPISSENSEGLLELPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K ++ L + F + ++ ++CY Q +A E D
Sbjct: 121 MQCLEGKNILILRAEKGRDFFAEQASLRGANIQYLECYRRQYLADSITEKMSLCKRAGID 180
Query: 169 AILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKET 222
+I+ + ++ + I + +S IA N V ++
Sbjct: 181 SIIVTSTDILITLYEQTAEDDRQWLIECRLIVVSTRIAQLAYKLGWSRNKVLLSEKADNN 240
Query: 223 SLLK 226
SLL+
Sbjct: 241 SLLE 244
>gi|170755662|ref|YP_001780554.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum B1 str. Okra]
gi|169120874|gb|ACA44710.1| uroporphyrinogen III synthase/methyltransferase [Clostridium
botulinum B1 str. Okra]
Length = 486
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 70/236 (29%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++A + ++ +G + + E++ L + Y IA+TS +
Sbjct: 251 NICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNAEENLKPYLNRLKEYDYIALTSVNA 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLA------RQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + A K + K + E K
Sbjct: 311 VKIFFDYLIKENIDIRNINAKFAAIGPATSEAIKVRGIMPSIKSKHFVAESLFEEMKKHV 370
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++ K D L + + + Y + ++AD +LF
Sbjct: 371 QSGDKVLVPRSKDARSFLVDALKKEGCIVDEVHIYETLCGQSS---HTERFEDADTVLFT 427
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V S+ I + + A+ + + ++ ++ L
Sbjct: 428 SPSTVKNMISMVGIDSIKEKSIIAIGPITAAELYKNNIEC-SICDEYSINGIIDKL 482
>gi|58584985|ref|YP_198558.1| uroporphyrinogen-III synthase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419301|gb|AAW71316.1| Uroporphyrinogen-III synthase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 235
Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/237 (18%), Positives = 88/237 (37%), Gaps = 15/237 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I++TRP+ +L T+ ++K GY + P H + + + + TS S
Sbjct: 1 MKSILLTRPLSDSLNTRSTLKKYGYKVYIEPAFTIKHLQPDI---SAYKFDVVISTSKNS 57
Query: 60 LSTLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ PI +G ++ A+ GF+ I N L +
Sbjct: 58 VKAFSQICRVDDLPIITVGNSTMQTAKDSGFSDIISADSNVEGLISFVKNYYSRAV---K 114
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
+Y+ G+ + + L E +R + Y + KNLL + F++
Sbjct: 115 FLYIRGQEVSCDLKKRLSEEGFNVREVILYKTIIKRGLTNRCKNLLLGGRINSVAFFSSQ 174
Query: 177 SVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F SL L + + + +S NI ++ + + P + +L+ ++
Sbjct: 175 TARIFCSLVLKSGLSNVMDNITAYAMSKNIVDSLKPIKWKKIITSRLPTQENLIDII 231
>gi|168702754|ref|ZP_02735031.1| uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase
[Gemmata obscuriglobus UQM 2246]
Length = 513
Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 72/257 (28%), Gaps = 29/257 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIAIT 55
+++TRP +A K++ +G + +P ++ + + T
Sbjct: 260 RVLVTRPAHQAGGMVRKLEHLGAVVSRLPAVEIRDVDNFASVDRALGQLRHGEWDWLVFT 319
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S+ + L + AIG +A R+ + + +
Sbjct: 320 SANGVHALLRRLDTIGRDLRDLGGVKLAAIGPKTAESLREYRLRADVVPDTTFSS--EGL 377
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ ++ + + + Y D+ PE + + L+
Sbjct: 378 AGALKPHVAGQRVLLARANRGRE-LLRTELAKVATVEQVTVYDQVDVTAPEGAVLDALRR 436
Query: 167 ADA--ILFYARSSVLYFFSLPLP------AKISAAFLCLSNNIASAIPASYKNVVTVACF 218
+ + + S + + + +S A+ A V A
Sbjct: 437 GEIRFVTLPSSSIAKGVLAAFDETINGRVERGEIKLIVISPETGKAVRALGYPVAAEATT 496
Query: 219 PKETSLLK---LLPLRR 232
E L++ L ++
Sbjct: 497 FTEDGLIEAVLALARQK 513
>gi|16331265|ref|NP_441993.1| uroporphyrin-III synthase [Synechocystis sp. PCC 6803]
gi|1001439|dbj|BAA10063.1| uroporphyrin-III synthase [Synechocystis sp. PCC 6803]
Length = 538
Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 71/255 (27%), Gaps = 33/255 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
I++TR +A + E + + G + M + ++ +A + + +TS+
Sbjct: 280 ILVTRAADQASQFTELLHQQGATVLAMAALEIVPPKDWQPLDQAIAKLGDFDWLILTSAN 339
Query: 59 SLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ H + +G+ +A + G F +A +VE
Sbjct: 340 GVEFFFQRLQHHGLDSRALAGLKLAVVGKKTAQSLEKFGLKPDFIPP---DFIADALVEH 396
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP-LRVIDCYYSQDIAYPETTMKNLLQNA- 167
+++ + + K + + Y S + + + N
Sbjct: 397 FPHSPAGLKILFPRVESGGRAQLVQELSQKQALVTEVPSYQSACPGHMPEEVWQSIVNQT 456
Query: 168 -DAILFYARSSVLYFFSLPLPAKI------------SAAFLCLSNNIASA-IPASYKNVV 213
D I F + +V +F L + + + V
Sbjct: 457 VDVITFASSKTVSHFRQLLAQTSQANGYQDWRSLINHCQIASIGPQTSERCLRELG-RVD 515
Query: 214 TVACFPKETSLLKLL 228
A L +
Sbjct: 516 IEATEYTLEGLTGAI 530
>gi|251773213|gb|EES53765.1| Uroporphyrin-III C-methyltransferase / synthase [Leptospirillum
ferrodiazotrophum]
Length = 539
Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/245 (12%), Positives = 77/245 (31%), Gaps = 21/245 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSSE 58
I++TR ++ E ++ +G + P + ++ + + + I S
Sbjct: 265 RILLTRERSRSKELSETLEALGATVITFPTIHVSPSFSEKSMHTIEHLKDFAWIVFLSPN 324
Query: 59 SLSTLPANFCRHTP---------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + IF++G A++ + G ++ +
Sbjct: 325 GVQYFLEGLGKSNKDLRSLAGLRIFSMGPATSTALNEAGLRPDLAPAESHGEGVID-AFR 383
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE---TTMKNLLQN 166
+ ++ + G L E + I Y + P ++ +L
Sbjct: 384 NLPEPHSGKVLLVRGDRGTGAIPRGLEELGYGVETISVYENTLPDVPSYRMERLRTILDE 443
Query: 167 ADA--ILFYARSSVLYFFSLPLPAKISAAFL---CLSNNIASAIPASYKNVVTVACFPKE 221
+FY+ S++ F SL + + + + + S + +A P
Sbjct: 444 GAIDLAIFYSPSAIRGFISLFPDHAEAISRIPSLAIGPTTREELLRSAIQTLVMAKNPTT 503
Query: 222 TSLLK 226
S+++
Sbjct: 504 PSVVE 508
Score = 44.8 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 10/118 (8%), Positives = 31/118 (26%), Gaps = 7/118 (5%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI-AYPETTMKNLLQNADAILFYAR 175
K ++ + R+ + L + + + L++ I+F +
Sbjct: 264 KRILLTRERSRSKELSETLEALGATVITFPTIHVSPSFSEKSMHTIEHLKDFAWIVFLSP 323
Query: 176 SSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ V YF + + ++A+ + ++
Sbjct: 324 NGVQYFLEGLGKSNKDLRSLAGLRIFSMGPATSTALNEAGLRPDLAPAESHGEGVIDA 381
>gi|110835182|ref|YP_694041.1| uroporphyrinogen-III synthase [Alcanivorax borkumensis SK2]
gi|110648293|emb|CAL17769.1| uroporphyrinogen-III synthase [Alcanivorax borkumensis SK2]
Length = 243
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 64/236 (27%), Gaps = 17/236 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
+V+TRP + R + + GY P+ P L Y A+ S
Sbjct: 9 RVVVTRPEGQQQRLMGLLVEAGYQPLHQPALVIEPITVDDTMQRTLMELDGYHAVFFASV 68
Query: 58 ESLS---TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAKIIVEQKVL 112
+ + A+ P+ A + + N ++ +
Sbjct: 69 NAARLALSAMADLWPQWPVGVHWLAVGRATAAELESWHLPATVPQQGFNTEAVLALPCLQ 128
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+K ++ G L + + Y + + + D ++
Sbjct: 129 QLVEKQILICRGDSGRELLAQTLQSRGARVDALAFYRRKAASP-----VLIPAETDWVMI 183
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ P + +A + A + V+VA + +L L
Sbjct: 184 TSVQGWQAIGGSVPPC---CGVVAAGERVADVVRAEHSGDVSVAASAHDEDMLSAL 236
>gi|121997817|ref|YP_001002604.1| uroporphyrinogen III synthase HEM4 [Halorhodospira halophila SL1]
gi|121589222|gb|ABM61802.1| uroporphyrinogen-III synthase [Halorhodospira halophila SL1]
Length = 264
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 21/220 (9%), Positives = 61/220 (27%), Gaps = 17/220 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+++TRP +A ++ G P I + E + S
Sbjct: 10 VIVTRPTHQAEGLVHALEAAGAGVWRFPTLDIIAEPEDAARQEAARRAACADWLIFVSQN 69
Query: 59 SLSTLPANFCR------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+++ H +G+ +A R+ G ++ + + ++ E +
Sbjct: 70 AVAHGLPRIRAAGGPAGHARCATVGQGTAEALRRNGIEEVLYPRHG-ATSEDLLAETDLG 128
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAI 170
++ + G + + L + ++ Y + + +
Sbjct: 129 RISAGRVMIVRGVGGRPYLAEALRARGAEVDFLEVYRRVRPSTDPAPLLEAAEADRVQVV 188
Query: 171 LFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIP 206
+ + + F L + + +A+
Sbjct: 189 VATSGEVLDNFLELVGDRGRRWLARAGVVVIGERVATMAA 228
>gi|328951195|ref|YP_004368530.1| Uroporphyrinogen-III synthase [Marinithermus hydrothermalis DSM
14884]
gi|328451519|gb|AEB12420.1| Uroporphyrinogen-III synthase [Marinithermus hydrothermalis DSM
14884]
Length = 233
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 63/225 (28%), Gaps = 12/225 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESL 60
+V+TR K + +++ +G +PL + L +++ + +TS E
Sbjct: 4 VVLTRERGKNAALRARLEALGIAAFELPLLAHAPGPDQDRLEAALGEAWDWVVVTSPEGA 63
Query: 61 STLPANFCRHTP--IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
L + + + + + A + E
Sbjct: 64 RVLLEAWVAAGRPELRVAAVGTGTARVLEDAGLRPGFVPSRAKGAALAQE----LPGAGR 119
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++Y + E L + ++ Y + + P + Q F + S+V
Sbjct: 120 VLYPASALADATLEAGLGARGFRVVRLNVYTTLPVEVPPEAARRARQADAVA-FASPSAV 178
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ C+ A A + + V P
Sbjct: 179 RAWVRAVGGDL---PAACIGETTARAARDAGFSRVFYPERPGLEG 220
>gi|109090915|ref|XP_001086537.1| PREDICTED: uroporphyrinogen-III synthase isoform 2 [Macaca mulatta]
Length = 265
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/251 (12%), Positives = 71/251 (28%), Gaps = 27/251 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + + ++ G ++P+ F F L+ + YG +
Sbjct: 1 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ ++ + K + + +
Sbjct: 61 FTSPRAVEAAQLCLEKNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ + PL++ G + L + I + + Y + + +
Sbjct: 121 NAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESVTVYQTIPHPGIQGNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + A A+ A V
Sbjct: 181 NSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVS 240
Query: 214 TVACFPKETSL 224
A P +L
Sbjct: 241 CTAESPTPQAL 251
>gi|186476929|ref|YP_001858399.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia phymatum STM815]
gi|184193388|gb|ACC71353.1| protein of unknown function DUF513 hemX [Burkholderia phymatum
STM815]
Length = 686
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 65/258 (25%), Gaps = 39/258 (15%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+V+TRP ++ + G V PL ++ LA + Y + S
Sbjct: 30 VVLTRPAGQSEALARTLHDAGVATVEFPLIEIAATDDATPLRAALASLEKYALVVFVSPN 89
Query: 59 SLSTLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAK---------- 104
++ AN PI +G S + G + + A
Sbjct: 90 AVDYAFANHDAIWPHALPIGVVGPGSVAALAKHGVEAPAYQVISPGAAADDNGDGARFDS 149
Query: 105 ------IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPE 157
+ K ++ + G + L E + + Y
Sbjct: 150 EALYSALEASLGDNAFEGKRVLIVRGDGGREWLAERLREAGAEVETVAAYRRLVPEPSIG 209
Query: 158 TTMKNLL------QNADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIAS 203
+ A L + L ++ F+ IA
Sbjct: 210 AWSRIHALLSDTSTARHAWLLTSSEGARNLAELAHDHLTNSEQTHLKRAMFVAPHPRIAE 269
Query: 204 AIPASYKNVVTVACFPKE 221
A + +TV+ E
Sbjct: 270 TARALGFDSITVSGAGDE 287
>gi|302754452|ref|XP_002960650.1| hypothetical protein SELMODRAFT_403066 [Selaginella moellendorffii]
gi|300171589|gb|EFJ38189.1| hypothetical protein SELMODRAFT_403066 [Selaginella moellendorffii]
Length = 299
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 78/232 (33%), Gaps = 11/232 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIAITSSES 59
+V+TR K + + ++ + +PL + LA+ +S+ I +TS E+
Sbjct: 51 VVVTRERGKNDKLIKALRNHQIECLELPLIEHTPGPDLHRLALTLQERSFQWIVVTSPEA 110
Query: 60 LSTLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + C + +G+ + R F S ++ +++
Sbjct: 111 AAVFANEWKNAGCPKVKVAVVGDGTKQAFRDTVSQPNFEVGFVSSQATAKVLAEELPKPD 170
Query: 116 QKP---LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
++Y + + L + ++ Y ++ + + + A + F
Sbjct: 171 GGQSLEVLYPASLKASDDLANGLSHRGFKVCRLNTYSTESVKVLPESDVQMALRASVVAF 230
Query: 173 YARSSVLYFFSLP-LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ ++V + L + A C+ A+A + + A P
Sbjct: 231 ASPTAVKAWMELVAKTHDWNGAAACIGGTSAAAARKAGMEKIFYAHNPGIDG 282
>gi|257092425|ref|YP_003166066.1| Uroporphyrinogen III synthase HEM4 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044949|gb|ACV34137.1| Uroporphyrinogen III synthase HEM4 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 258
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 67/243 (27%), Gaps = 17/243 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I +TRP +A R I + G PV+ PL E +A Y S
Sbjct: 9 RIAVTRPRAQAARLAAWITEQGGEPVLCPLLEIAPAEEQAPLQAAIAQLDVYSLAVFISP 68
Query: 58 ESLST------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI-IVEQK 110
+++ + AIG+++ L G ++ + A + + E +
Sbjct: 69 NAVAFSVPVILAGRRWPEALQAVAIGQSTVDLLAAHGIENTLAPRERFDSEAVLELPELQ 128
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ-DIAYPETTMKNLLQNADA 169
K + L G D L + ++ CY DA
Sbjct: 129 AQRVAGKRALLLRGNGGRELLADTLRARGADVDLVSCYRRSAPADAGPLQALLHADELDA 188
Query: 170 ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ + + L IA V + P + +L
Sbjct: 189 LTVSSSEGLRNLVDLLDGPARARLRQTPLFVPHQRIAEVAAGLGLQGVILT-GPADAGIL 247
Query: 226 KLL 228
L
Sbjct: 248 AAL 250
>gi|32490990|ref|NP_871244.1| hypothetical protein WGLp241 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166196|dbj|BAC24387.1| hemD [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 245
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/244 (14%), Positives = 72/244 (29%), Gaps = 16/244 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I+ITRP I+K G +PL YF + F Q I S
Sbjct: 1 MTILITRPYPHGQHLINMIRKNGKEAWYLPLIYFTSGIGLLSLTNFFKKLQEKDIICSLS 60
Query: 57 SESLST-----LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ L I +++ ++ +++
Sbjct: 61 PRATKYANYQILLEKCNWPKKINYYAIGKTSAFYLSKYSKCKVIYPKLTENSENLLDLIS 120
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA-- 169
+K ++ L G E+ L + + ++CY I Y + + N
Sbjct: 121 KEDVKKKILILKGNNGRKFLENKLKLYGAYIINVECYKRNFIKYNKYDYLKKIINLKINT 180
Query: 170 ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++ + + + I+ + +S I+ + V+ K +
Sbjct: 181 LVVTSSEILHQLHNNIPLNYINFFLINFKLVVVSKRISDIADNLGWKNIIVSKSSKNKDI 240
Query: 225 LKLL 228
++ L
Sbjct: 241 IQSL 244
>gi|157693216|ref|YP_001487678.1| uroporphyrinogen III synthase [Bacillus pumilus SAFR-032]
gi|157681974|gb|ABV63118.1| possible uroporphyrinogen III synthase [Bacillus pumilus SAFR-032]
Length = 263
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 76/247 (30%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSE 58
+++TR ++A Q+KI+++ ++ L F + FL ++ + TS
Sbjct: 12 VLVTRNERQAGVFQQKIEELNGHAILTSLIRFEPTLTNEKAQAFLKDLENSQWLVFTSVN 71
Query: 59 SLSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S + H + A+GE ++ Q G +
Sbjct: 72 GASFFLSYIEDHHLHKSLSHLKVAAVGEKTSAYLEQHGLKVDVVPGRFIAEELADALLDH 131
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK--NLLQNAD 168
V + + G + L+ I ++ Y + +K Q+ D
Sbjct: 132 VQLG--ERVFVAKGHLSRDVVKKTLVPLGIEVKEWILYETVKDEEGIAALKTEMTKQSFD 189
Query: 169 AILFYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V F + F+ + A+ +
Sbjct: 190 FITFTSSSTVHSFMHAMEADAANLAASDTCFVTIGPLTKEALLQYGISS-ETPDTYTIDG 248
Query: 224 LLKLLPL 230
+L+L+
Sbjct: 249 MLELMCR 255
>gi|114568595|ref|YP_755275.1| uroporphyrinogen III synthase HEM4 [Maricaulis maris MCS10]
gi|114339057|gb|ABI64337.1| Uroporphyrinogen III synthase HEM4 [Maricaulis maris MCS10]
Length = 245
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 92/236 (38%), Gaps = 12/236 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TR A RT +++MG P++ P+ + A A+ TS+ +
Sbjct: 1 MTVLVTRGWPGAERTASGLRQMGIDPIISPVLDINF--RARIDASLDGVQALVFTSANGV 58
Query: 61 STL-PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
P R +FA+ +A+A AR GF ++ + + +LA +I ++ L + L
Sbjct: 59 RAWGPRRPERDIQVFAVADATAQAARDIGFKRVHSAQGDVTSLANLI--RRKLNPGKGSL 116
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYARSS 177
+++ G + L +R Y + + + + ++L ++
Sbjct: 117 LHVRGIHVSGDLSGALKPDGFKVRDAIGYGAVAVDALGEEAIAAVISGAPVSVLIHSARG 176
Query: 178 VLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F L + L +S N + + + + A P E +LL LL
Sbjct: 177 AKTFLDLLRKFGLHHWLGSVTALGISRNALAPLEGAGFGALVAASVPNEEALLALL 232
>gi|297583720|ref|YP_003699500.1| uroporphyrinogen III synthase HEM4 [Bacillus selenitireducens
MLS10]
gi|297142177|gb|ADH98934.1| Uroporphyrinogen III synthase HEM4 [Bacillus selenitireducens
MLS10]
Length = 264
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 62/246 (25%), Gaps = 18/246 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR---ESVFLAMQQSYGAIAITSSE 58
I+ TR + +++ G V +PL + F ++ + TS
Sbjct: 9 RILNTRAPHQQKALTDRLTAWGADVVELPLIRVERVKGVSVREFREAFEAADVVVFTSRN 68
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQ----------KGFTQIFHGKDNSINLAKIIVE 108
++ + +
Sbjct: 69 AVEVTMDLLKEACQTDDYTRCFEGKVIAAVGEKTGDVLMASGLTPSIMPDVFEAGHLARS 128
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA- 167
P + Y + L E + + Y ++ P + L +
Sbjct: 129 IVDQTAPGAEIFYPRSEKARKTLPKALTEAGRHVTELVIYTTKSQTIPSDKITELFEGDG 188
Query: 168 -DAILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYK-NVVTVACFPKETS 223
D I F + ++V FF PA + F + A+ K + V
Sbjct: 189 LDVITFMSPTAVQSFFQQMDPALVPDDVRFAVIGEVTERALRPYVKEERLIVPERYTLED 248
Query: 224 LLKLLP 229
+++ +
Sbjct: 249 MIRAIE 254
>gi|261417415|ref|YP_003251098.1| uroporphyrin-III C-methyltransferase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261373871|gb|ACX76616.1| uroporphyrin-III C-methyltransferase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302326013|gb|ADL25214.1| porphyrin biosynthesis protein HemDX [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 525
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 80/258 (31%), Gaps = 40/258 (15%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI-----------------------HDR 38
+V+TR K++ ++ +G + P+
Sbjct: 263 RLVVTRAAKQSSGITARLTALGAEVIETPMIETRNVLPYCHAELPSCIANSYEYDTAELA 322
Query: 39 ESVFLAMQQSYGAIAITSSESLSTLPANFC---------RHTPIFAIGEASACLARQKGF 89
+ + + +A TS+ + + I ++G+ + + G
Sbjct: 323 DLADFEDLKDFDILAFTSTNGVESFFEQLFTAEYDVRELAGKKIASVGKITEKKLLEYGI 382
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
+ KD++ +++ + V + +D L++ Y
Sbjct: 383 RCDYVPKDHTGEGLGLLLREVVDDES------RILLLQGNLADDTLLKLLPKATRWIVYE 436
Query: 150 SQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPAS 208
+ IA + + +ADA++F + S+V F + + + C+ ++
Sbjct: 437 TLPIAELPDWKREAIASADAVVFASSSAVENFAQISSLSSFVSRLSFCIGRMTEASAKKH 496
Query: 209 YKNVVTVACFPKETSLLK 226
V + SL+K
Sbjct: 497 GFETV-TSDETTMDSLVK 513
>gi|153814115|ref|ZP_01966783.1| hypothetical protein RUMTOR_00324 [Ruminococcus torques ATCC 27756]
gi|317499922|ref|ZP_07958158.1| siroheme synthase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087855|ref|ZP_08336780.1| hypothetical protein HMPREF1025_00363 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145848511|gb|EDK25429.1| hypothetical protein RUMTOR_00324 [Ruminococcus torques ATCC 27756]
gi|316898639|gb|EFV20674.1| siroheme synthase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330409550|gb|EGG88991.1| hypothetical protein HMPREF1025_00363 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 515
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 74/246 (30%), Gaps = 24/246 (9%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ-------QSYGAIAITS 56
++TRP + + ++++ +G + MP + + + L + TS
Sbjct: 260 LVTRPRQNSSALAKRLRNLGAQVIEMPSIHTVAIDPNERLKKALGEIQHSEKEEWFVFTS 319
Query: 57 SESLSTLPANFCRH-TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK----- 110
+ + + + A + + A I+ +
Sbjct: 320 PIGVHVFFEQLEKEAWDMRRLLAGKAQIKIAAIGSATAAALKEHGLFADIVPKIYNAGEL 379
Query: 111 -----VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI--AYPETTMKNL 163
+ + + + L+E +P+ I Y ++ + ++ +
Sbjct: 380 GKTLAENISEYSAVTIFRAEEGSLELLPPLMETGVPVNDIALYRTEYEVSSLLRHKIEKM 439
Query: 164 LQNADA--ILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
Q + + F + S+V F + + +C+ A+ + VA
Sbjct: 440 FQKEEIDAVTFTSASTVKGFVKAIKNVELQNVSAVCIGEQTAAEARKYGMK-IQVAKRAD 498
Query: 221 ETSLLK 226
++ +
Sbjct: 499 MDAMTE 504
>gi|170748488|ref|YP_001754748.1| uroporphyrinogen III synthase HEM4 [Methylobacterium radiotolerans
JCM 2831]
gi|170655010|gb|ACB24065.1| uroporphyrinogen III synthase HEM4 [Methylobacterium radiotolerans
JCM 2831]
Length = 239
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 18/243 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I + RP A RT + +G+ P++ P+ + A+ +TS+ ++
Sbjct: 1 MRIWVARPEPGATRTGAALAVLGHAPLVAPVLAVRPT---AAALPVGPFAALLLTSANAV 57
Query: 61 STLPANFC-----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
S L R P+FA+G +A LAR+ G + G ++ LA P
Sbjct: 58 SALRPALRDAPALRGLPVFAVGARTAALAREAGLGPVREGPGDAAGLA---ALVAASLPP 114
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFY 173
+PL++ G R L + Y ++ + + L A L Y
Sbjct: 115 GEPLLHATGAERKPEPAAALTAAGFRITAFVAYRAEALERLPPAVGRDLAEHRLEAALHY 174
Query: 174 ARSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R S +L A CLS ++A+ + A+ V VA P+E LL L
Sbjct: 175 SRRSAAVALALADGSEHGGAFRRLRHYCLSPDVAAPLEAAGVPVHFVAARPREADLLDAL 234
Query: 229 PLR 231
R
Sbjct: 235 ARR 237
>gi|94986230|ref|YP_605594.1| uroporphyrin-III C-methyltransferase [Deinococcus geothermalis DSM
11300]
gi|94556511|gb|ABF46425.1| uroporphyrinogen-III C-methyltransferase [Deinococcus geothermalis
DSM 11300]
Length = 507
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 21/229 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSSE 58
+ +TR + A E ++ G + +PL F + L + +TS++
Sbjct: 264 VAVTRTREGASALSELLRARGASVLEVPLIRFAATENAAALQTRLRDLSGVTWLLLTSNQ 323
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+++ L A+ + A+G ++A ++G F
Sbjct: 324 AVTALFAHLEHLGLDARHLAGVKVAAVGPSTARSLAEQGLRADFVPSTPGARYLG----V 379
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ P + ++L + + L I + Y ++ + L+ AD
Sbjct: 380 QLPARPGEVALHLTSQVAEAELQQTLEARGIRYERAELYRTEPARLSTPEL-ERLRGADV 438
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
+ + S+ + +L + A A A+ VTVA
Sbjct: 439 VTLASGSAARHLAALAGTDF---TVAAMGPQTADAARAAGFTRVTVARE 484
>gi|187923071|ref|YP_001894713.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia phytofirmans PsJN]
gi|187714265|gb|ACD15489.1| protein of unknown function DUF513 hemX [Burkholderia phytofirmans
PsJN]
Length = 672
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 66/262 (25%), Gaps = 37/262 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+VITRP ++ ++ G + PL + LA + Y + S
Sbjct: 20 VVITRPAGQSNELIARLAAAGIATLDFPLIDIAPVIDDAPLRAALASLERYALVVFVSPN 79
Query: 59 SLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSIN----- 101
++ A P + A+ + +++
Sbjct: 80 AVDHAFAQSDSIWPHALPIGVVGPGSVQALARHGVAAPAYNVISPPSGSDEDTARFDSEG 139
Query: 102 -LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPETT 159
A I K ++ + G + L E + + Y
Sbjct: 140 LFAAIDAALGATSLEGKRVLIVRGDGGREWLAERLREAGAEVDTVAAYRRLVPEPSIGAW 199
Query: 160 MKNL---LQNADAILFYARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPAS 208
+ A L + V L AA + IA A
Sbjct: 200 ARVHELLAGVPHAWLLTSSEGVRNLNELAHDHLTADEIAQLKRAALVTPHPRIAQTARAL 259
Query: 209 YKNVVTVACFPKE---TSLLKL 227
+ +TV+ E +L+
Sbjct: 260 GFDSMTVSGAGDERIARALIAA 281
>gi|227823723|ref|YP_002827696.1| uroporphyrinogen-III synthase [Sinorhizobium fredii NGR234]
gi|227342725|gb|ACP26943.1| putative uroporphyrinogen-III synthase protein [Sinorhizobium
fredii NGR234]
Length = 236
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 16/240 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A RT K++ MG+ +++PL H +V + + AIA+TS+E++
Sbjct: 1 MRVLVTRPRPAAERTARKLEAMGHTAIVLPLMQAQHFVAAVRAGFARPHDAIAVTSAEAV 60
Query: 61 STL-----PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L TP FA+G A+A +A GF I G LA+ + L
Sbjct: 61 RVLAGLGPDLQAHLATPFFAVGAATARVAADLGFRDIRVGAGTGEALAETVAGF--LEPE 118
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFY 173
L+Y G PR FE L E I ++CY I + T+ L+Q DA+L Y
Sbjct: 119 TGSLLYFAGLPRADGFEHALRERGIDHVTVECYRMGAIDHAPETLPALVQSVPFDAVLLY 178
Query: 174 ARSSVLYFFSLPLPAKISA-----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R + +L + + +LCLS ++ +P S V P E LL LL
Sbjct: 179 SRETARRLVALIGESGLDCAGFSARYLCLSASVQDVLPTSAAADVA--AAPDEDRLLGLL 236
>gi|313110332|ref|ZP_07796222.1| uroporphyrinogen-III synthetase [Pseudomonas aeruginosa 39016]
gi|310882724|gb|EFQ41318.1| uroporphyrinogen-III synthetase [Pseudomonas aeruginosa 39016]
Length = 251
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 65/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
+++TRP ++ + + G +PL E+ Y A+ + S
Sbjct: 5 RLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSK 64
Query: 58 ESLSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQK 110
+ R+ P + A+ + + + + +S L + Q
Sbjct: 65 PAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPALQD 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNAD 168
L ++ + G+ + L + + + Y + YP + + +
Sbjct: 125 SLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVT 214
++ + + + L S +A V
Sbjct: 185 GLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQRVI 233
>gi|194017056|ref|ZP_03055668.1| uroporphyrinogen-III synthase [Bacillus pumilus ATCC 7061]
gi|194010924|gb|EDW20494.1| uroporphyrinogen-III synthase [Bacillus pumilus ATCC 7061]
Length = 263
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 78/247 (31%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSE 58
+++TR ++A Q+KI+++ V+ L F + FL ++ + TS
Sbjct: 12 VLVTRNERQAGVFQQKIEELNGHAVLTSLIRFEPTLTNEKAQAFLKDLENSQWLVFTSVN 71
Query: 59 SLSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S + H + A+GE ++ Q G + ++
Sbjct: 72 GASFFLSYIEDHHLHKSLSHLKVAAVGEKTSAYLEQHGLKVDVVPERFIA--EELADALL 129
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK--NLLQNAD 168
P + + G + L+ I ++ Y + +K Q+ D
Sbjct: 130 DHVRPGERVFVAKGHLSRDVVKKTLVPLGIEVKEWILYETVKDEEGIAALKTAMTKQSFD 189
Query: 169 AILFYARSSVLYFFSLPLPAKISAA-----FLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V F A F+ + A+ +
Sbjct: 190 FITFTSSSTVHSFMHAMEADAAKLAASDTCFVTIGPLTKEALLQYGISS-ETPDTYTIDG 248
Query: 224 LLKLLPL 230
+L+L+
Sbjct: 249 MLELMCR 255
>gi|304556621|gb|ADM35660.1| uroporphyrinogen III synthase housekeeping variant [Felis catus]
Length = 254
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 75/251 (29%), Gaps = 27/251 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + P + ++ G ++P+ F S F L+ + YG +
Sbjct: 1 MKVLLLKDPKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLSSFSEKLSHPEGYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ + + + K + ++
Sbjct: 61 FTSPRAVEAVELCLEKDNKTEVWKHSLKEKWNAKSVYVVGSATSSLVNKIGLDTEGESCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ +P PL++ G + L + IP+ I Y + +
Sbjct: 121 NAEKLAEYICSRESPALPLLFPCGTVKGEILPKMLKDKGIPMESIIVYQKVPHPGIQVNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + + A A+ A V
Sbjct: 181 HSYYSQQGIPASITFFSPSGLTHSLKHIQELSGDNIGRIKFAAIGPSTARALAAQGLPVS 240
Query: 214 TVACFPKETSL 224
A P +L
Sbjct: 241 CTAESPTPPAL 251
>gi|87125209|ref|ZP_01081055.1| Uroporphyrinogen-III synthase [Synechococcus sp. RS9917]
gi|86166978|gb|EAQ68239.1| Uroporphyrinogen-III synthase [Synechococcus sp. RS9917]
Length = 269
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 26/247 (10%), Positives = 66/247 (26%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR ++ +++++ +G + +P E LA + + ++S+
Sbjct: 14 VVVTRAQEQQGAVRQQLESLGAQVLDLPALVIGPPDEWGPLDDALAELDQFHWLVVSSAN 73
Query: 59 SLSTLPANFCRHTPIFAIGEAS-------ACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + A R S A +A +++
Sbjct: 74 GVQAVEARLQRQGRSLRQRPCSLKIAAVGRKTAASLDHLGAPADFVPPTFVADSLIDHFP 133
Query: 112 LFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ L+ + E + + Y S+ + L++
Sbjct: 134 VSGWGLRLLLPRVQSGGRTVLAEAFAEAGARVVEVAAYESRCPESIPADTEQALRDGRVE 193
Query: 170 -ILFYARSSV--------LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
I F + +V F + + + + V A
Sbjct: 194 AISFSSGKTVTHTAALLERSFGAQWRQRLEGVRLISIGPQTSQRCRELLGRVDGEADPHD 253
Query: 221 ETSLLKL 227
L++
Sbjct: 254 MDGLVQC 260
>gi|114778462|ref|ZP_01453307.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Mariprofundus ferrooxydans PV-1]
gi|114551306|gb|EAU53864.1| putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III
synthase [Mariprofundus ferrooxydans PV-1]
Length = 263
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 92/244 (37%), Gaps = 19/244 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSES 59
I++TR + E +++ G +PV P +++ +A + + + TS
Sbjct: 10 RILLTRAAAQLPALAEMVRRRGAVPVAFPCLAVESMPDTIMQAIAKLERFSDVLFTSCNG 69
Query: 60 LSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+S++ H + A+G +A Q G + S +V+
Sbjct: 70 VSSVVDALGSHGMDAAALFAPMRVAAVGNQTADCLNQHGIRTDIVPETASQ---DGLVDA 126
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--A 167
+ + L++ + + L E I + + Y + + + +L++
Sbjct: 127 YLQSGLPERLLFFRAEEGREALAEALTERGIEVETVAAYRTICPHDDASDVIAMLRDGEV 186
Query: 168 DAILFYARSSVLYFFSLPLPAKISAAF--LCLSNNIASAIPASYKNVVTVACFPKETSLL 225
DA+L + + L++ A ++A + +S +A+A +V VA ++L
Sbjct: 187 DAVLLGSARACLHYLQRVGDATLAARPVSVAISQKMAAAAMCGGLHVQLVAKSASFEAML 246
Query: 226 KLLP 229
+L
Sbjct: 247 DVLS 250
>gi|311693130|gb|ADP96003.1| uroporphyrinogen-III synthase [marine bacterium HP15]
Length = 269
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 76/244 (31%), Gaps = 18/244 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
I+I RP +A R + + G ++PL E+ + + + S
Sbjct: 14 RILICRPEPEASRLASRFRAAGADVHILPLIDREPLPETPERRTLILSLDEFSHVIAVSP 73
Query: 58 ESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ L P + +G +A + + G + + + ++
Sbjct: 74 FAARLLLEEVDTWWPQVPMGIRWYGVGAGTAAVLAEHGLSPRRPPEGWTS--EALLALPS 131
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--D 168
+ + ++ G+ + L + ++ Y + ++ L +
Sbjct: 132 LQNLQHERVLLARGETGRELIRETLEARGARVTLLPLYRRFRPDHAPERIRATLDTFAPE 191
Query: 169 AILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
AI+ + ++ +L + + + ++ +A A+ + + ++
Sbjct: 192 AIVALSGETLNNLIALCANSGHNLYDRLLIVPADRVAEQARAAGFLNPCIPGSLADNDIV 251
Query: 226 KLLP 229
+
Sbjct: 252 ATVA 255
>gi|268317442|ref|YP_003291161.1| Uroporphyrinogen III synthase HEM4 [Rhodothermus marinus DSM 4252]
gi|262334976|gb|ACY48773.1| Uroporphyrinogen III synthase HEM4 [Rhodothermus marinus DSM 4252]
Length = 238
Score = 94.9 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 86/228 (37%), Gaps = 19/228 (8%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSESLSTLP--- 64
++ E ++ GY P ++P+ + LA ++YG + TS ++ +
Sbjct: 15 ESDPFAEALRAAGYRPFVLPVLSVVWCNTEQLRAVLARSEAYGGLIFTSPRAVEAVRRLG 74
Query: 65 --ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
R P++ +G +A A+ G + LA++I++ P++PL++L
Sbjct: 75 SLPEAWRRRPVYVVGPRTAAAAQALGLQPRGEAAGSGRELARLILQAP---RPERPLLFL 131
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQD-IAYPETTMKNLLQNADAILFYARSSVLYF 181
G R L PL + Y ++ + + + ++F++ S +
Sbjct: 132 CGARRRDELPALLRAAAFPLEELVVYDTRPSVPELPAEVPDW------VVFFSPSGLEAA 185
Query: 182 FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L A+ + A+A+ V VA P LL +
Sbjct: 186 RRL-PIARERVRVAAIGPTTAAALQQEGWPVAAVARTPTPEGLLAAMQ 232
>gi|49082228|gb|AAT50514.1| PA5259 [synthetic construct]
Length = 252
Score = 94.9 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 65/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
+++TRP ++ + + G +PL E+ Y A+ + S
Sbjct: 5 RLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSK 64
Query: 58 ESLSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQK 110
+ R+ P + A+ + + + + +S L + Q
Sbjct: 65 PAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQD 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNAD 168
L ++ + G+ + L + + + Y + YP + + +
Sbjct: 125 SLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVT 214
++ + + + L S +A V
Sbjct: 185 GLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQRVI 233
>gi|254292448|ref|YP_003058471.1| uroporphyrinogen III synthase HEM4 [Hirschia baltica ATCC 49814]
gi|254040979|gb|ACT57774.1| Uroporphyrinogen III synthase HEM4 [Hirschia baltica ATCC 49814]
Length = 240
Score = 94.9 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 15/237 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TR A +T ++++ G++ +P + S+ Q GA+ TS +
Sbjct: 7 VLVTRAEPGATQTTNRLKQNGFLGEKLPAIKL--TQTSIVFNQQNYKGALIFTSQNGVQF 64
Query: 63 LPANFCRHTP-IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
P RH +F +G+A+A ARQ GF I + ++ +L + I E PL++
Sbjct: 65 APRAPFRHAKQVFCVGDATAQAARQAGFKNIHSARGDANDLKQFISENWK--PNNGPLLH 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA---DAILFYARSSV 178
+G + L + + Y S+ E +++ LQ D IL ++ +
Sbjct: 123 MGNSTPRGNIVQDLNDEGYDAEFLPVYQSKIHPDFEEKLRHRLQMDLKLDVILVHSPMAA 182
Query: 179 LYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F L L + +S + + + + V A P E SLL+ L
Sbjct: 183 E-FIDLALQDWSQLSSITLPKVVAISPDAGNPLKDLFNEKVICAAKPNEISLLEQLK 238
>gi|147920612|ref|YP_685589.1| uroporphyrinogen-III synthase [uncultured methanogenic archaeon
RC-I]
gi|110620985|emb|CAJ36263.1| uroporphyrinogen-III synthase [uncultured methanogenic archaeon
RC-I]
Length = 256
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 34/252 (13%), Positives = 66/252 (26%), Gaps = 23/252 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-----MQQSYGAIAITS 56
I +TRP K T +++ G V +P+ I + A + ITS
Sbjct: 3 RIAVTRPRKFLPDTVRILKEKGLEAVPVPMMEMIPRNDGALEAFFKRLEAGEADTVIITS 62
Query: 57 SESLSTLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + + + I H + ++ +V+
Sbjct: 63 QNGVQFIYDKAPDPAALTKQLNSVEVIGIGPRTNSVLTERGITHLQMPGTFSSEGLVQDF 122
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI--AYPETTMKNLLQ-NA 167
K + L N L +R I Y + ++ L+
Sbjct: 123 CAKLKGKRVEVLRSNHGNPILISGLEAGGAKVREIIVYDIVPLKGEEQAAFVREALEGRI 182
Query: 168 DAILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
DA F + + + S + + A + S V V
Sbjct: 183 DAYTFTSTMTARSLLMMGESMGVLDPLKREINSKKVAVIGHPTADFLKKSGIRVDAVPER 242
Query: 219 PKETSLLKLLPL 230
+++ L
Sbjct: 243 FTFEDMVEALLR 254
>gi|319760697|ref|YP_004124635.1| uroporphyrinogen-III synthase [Candidatus Blochmannia vafer str.
BVAF]
gi|318039411|gb|ADV33961.1| uroporphyrinogen-III synthase [Candidatus Blochmannia vafer str.
BVAF]
Length = 249
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 73/249 (29%), Gaps = 20/249 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP K+ +G +PL YF + +L + +S + S
Sbjct: 1 MNILVTRPSPNGEELVHKLLAIGKFAHHLPLIYFSSGKNLPLIKKYLNLLESGDLLFFLS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV-EQ 109
++ T + + L N ++ +
Sbjct: 61 QHAVKYAHFQLLKTGGHWPSTITYYSIGSRTSLKMYILSGISSKYPYNEETSENLLQFPE 120
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNA 167
+ + + L G ++ L + + +CY I Y NL+ N
Sbjct: 121 LIQNISGRRALILKGNNGRTLLQNTLQQRGALVLSFECYTRNPIKYNGQEQLNLMLALNI 180
Query: 168 DAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYK--NVVTVACFPK 220
I+ + ++ + L I + +S ++ + +A
Sbjct: 181 TTIVVTTKETLKQLYYLIPQHYRDTWLIQCQLIVVSIRLSKIAENLGWNKTNIIIAKSAN 240
Query: 221 ETSLLKLLP 229
++ +L
Sbjct: 241 NNAIFNILK 249
>gi|237809862|ref|YP_002894302.1| Uroporphyrinogen III synthase HEM4 [Tolumonas auensis DSM 9187]
gi|237502123|gb|ACQ94716.1| Uroporphyrinogen III synthase HEM4 [Tolumonas auensis DSM 9187]
Length = 241
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 11/240 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +I RP A +++ G+ PV+ PL + E L + + S+ +
Sbjct: 1 MTPLILRPQPAAGELAAYLRRDGHTPVVCPLLTYQPGDELALLPALLKQAEITLAVSAAA 60
Query: 60 LSTLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + P A + + ++ + +
Sbjct: 61 VQFASRHLQQQKILWPPALTYLAVGPATAAEWQQQGLRVISPADARSEGLLAQPALQSVN 120
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFY 173
K ++ L G + L + ++CY + + Q A ++
Sbjct: 121 GKKIVILRGNGGRELLTETLRHRGAQVSCVECYRRHYLQTDGARLLQEWQAAAVDSVIIT 180
Query: 174 ARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ L + + S IA I S +T+ + ++ L
Sbjct: 181 SSELFRQLLILLPDTAGNWLSALRWFVASERIAEEIRHSGFKQITIMSGAQHQAVAAALS 240
>gi|307942603|ref|ZP_07657951.1| uroporphyrinogen-III synthase [Roseibium sp. TrichSKD4]
gi|307774242|gb|EFO33455.1| uroporphyrinogen-III synthase [Roseibium sp. TrichSKD4]
Length = 235
Score = 94.5 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 93/236 (39%), Gaps = 19/236 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++TRP+ RT K++ G+ V P+ + Y + +TS+
Sbjct: 1 MKFLVTRPLPDCHRTAAKLRAFGHEAVEEPMLTLR--VTLPTDLPAKDYSGVVVTSARVA 58
Query: 61 STL----PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
L A +H P+FA+G+ SA ++ G+ + + +L ++I++ P
Sbjct: 59 DVLTVSPIAERLKHLPVFAVGDRSAHAMQEAGWQDVRSAQGAVDDLERLILDH----KPV 114
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYA 174
PL+YL + R E+ L + + +++ Y + +A + + ++ D +L Y+
Sbjct: 115 GPLLYLAARDRAGGLENVLGKAGLSCDLVEAYAMEPVACLSARVADDIKAGRYDGVLIYS 174
Query: 175 RSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ F A +S + ++ V P E +LL
Sbjct: 175 ARTGETFLKAAQMTGVADALRDVPVYAISQSAGHSLE--GWTCVIAPAVPTEEALL 228
>gi|168028959|ref|XP_001766994.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681736|gb|EDQ68160.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 88/241 (36%), Gaps = 14/241 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
+V+TR K ++ + + K G + +PL + + L + + I +TS E+
Sbjct: 60 VVVTREHGKNVKLMKALAKRGIRCLELPLIEHRDGPDLLKLVQTLREGKFEWIVVTSPEA 119
Query: 60 ----LSTLPANFCRHTPIFAIGEASACLAR--QKGFTQIFHGKDNSINLAKIIVEQKVLF 113
L + I +G + L + ++G Q+ S AK++ +
Sbjct: 120 ATVFLRSWREAGRPKVRIAVVGAGTGELFQNAEEGANQLDVAFTPSKATAKVMSSELPKL 179
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++Y E+ L E + ++ Y ++ + + + + F
Sbjct: 180 SDDSNVLYPASLKAGDDLENGLKERGFHVMRMNTYSTETVRNLDEAAISEAASVPVATFA 239
Query: 174 ARSSVLYFFSLP-LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE----TSLLKLL 228
+ ++V + L P + A C+ + A+A + V P S+++ L
Sbjct: 240 SPTAVKAWMELVAEPKNWNGAAACIGSTSANAARKAGLQKVYHPESPGIEGWVESIMEAL 299
Query: 229 P 229
Sbjct: 300 E 300
>gi|15600452|ref|NP_253946.1| uroporphyrinogen-III synthase [Pseudomonas aeruginosa PAO1]
gi|107104361|ref|ZP_01368279.1| hypothetical protein PaerPA_01005436 [Pseudomonas aeruginosa PACS2]
gi|116053407|ref|YP_793732.1| uroporphyrinogen-III synthase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218894361|ref|YP_002443231.1| uroporphyrinogen-III synthase [Pseudomonas aeruginosa LESB58]
gi|254243857|ref|ZP_04937179.1| uroporphyrinogen-III synthetase [Pseudomonas aeruginosa 2192]
gi|296392118|ref|ZP_06881593.1| uroporphyrinogen-III synthase [Pseudomonas aeruginosa PAb1]
gi|12644664|sp|P48246|HEM4_PSEAE RecName: Full=Uroporphyrinogen-III synthase; Short=UROS; AltName:
Full=Hydroxymethylbilane hydrolyase [cyclizing];
AltName: Full=Uroporphyrinogen-III cosynthase
gi|9951570|gb|AAG08644.1|AE004938_6 uroporphyrinogen-III synthetase [Pseudomonas aeruginosa PAO1]
gi|115588628|gb|ABJ14643.1| uroporphyrinogen-III synthase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126197235|gb|EAZ61298.1| uroporphyrinogen-III synthetase [Pseudomonas aeruginosa 2192]
gi|218774590|emb|CAW30407.1| uroporphyrinogen-III synthetase [Pseudomonas aeruginosa LESB58]
Length = 251
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 65/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
+++TRP ++ + + G +PL E+ Y A+ + S
Sbjct: 5 RLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSK 64
Query: 58 ESLSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQK 110
+ R+ P + A+ + + + + +S L + Q
Sbjct: 65 PAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQD 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNAD 168
L ++ + G+ + L + + + Y + YP + + +
Sbjct: 125 SLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVT 214
++ + + + L S +A V
Sbjct: 185 GLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQRVI 233
>gi|114769713|ref|ZP_01447323.1| uroporphyrinogen-III synthase, putative [alpha proteobacterium
HTCC2255]
gi|114549418|gb|EAU52300.1| uroporphyrinogen-III synthase, putative [alpha proteobacterium
HTCC2255]
Length = 224
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 81/232 (34%), Gaps = 19/232 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIP---VMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
++ITRP K++ + + + K ++ P+ Y + S+ + + TS +
Sbjct: 8 LLITRPQKQSEQLLDDLIKRLGRVPRFIISPMIYIKDLKASLPKKLINPF---IFTSQNA 64
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
++ L + + + +G A LA+ GF I + +E+ + +
Sbjct: 65 VNILSKSTSQRGDVHCVGHKVANLAKLNGFDVISISET---------IEKMIESGLPEKC 115
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
YL G+ + Y + T K+ + I Y+ +
Sbjct: 116 TYLRGEQVTTDISSISSA---NIDEYILYAQVLLEITNET-KSEISKGCIIPVYSENMAN 171
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ + +C+SN ++ + V+ P +++ L +R
Sbjct: 172 HLVNCISSQNDHIIVVCISNKVSKPFEQCGFKNIIVSPKPSSDAMISALAIR 223
>gi|322805242|emb|CBZ02806.1| uroporphyrinogen-III methyltransferase [Clostridium botulinum
H04402 065]
Length = 486
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 75/238 (31%), Gaps = 17/238 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++A + ++ +G + + +++ L + Y IA+TS +
Sbjct: 251 NICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNAEKNLRPYLNRLKEYDYIALTSVNA 310
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + AIG A++ K + K + E K
Sbjct: 311 VKIFFDYLIKENIDIRNINAKFGAIGPATSEAI--KVRGIMPSIKSKHFVAESLFEEMKK 368
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++ K D L + + + Y + T ++AD +L
Sbjct: 369 HVQSGDKVLVPRSKDARPFLVDALRKEGCIVDEVHIYETLCGKC---THTERFEDADTVL 425
Query: 172 FYARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F + S+V + I + + A+ + + ++ ++ L
Sbjct: 426 FTSPSTVKNMIPMVGIDSIKEKSIIAIGPITAAELDKNNIEC-SICDEYSINGIIDKL 482
>gi|78183919|ref|YP_376354.1| uroporphyrinogen-III synthase [Synechococcus sp. CC9902]
gi|78168213|gb|ABB25310.1| uroporphyrinogen-III synthase [Synechococcus sp. CC9902]
Length = 272
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 65/247 (26%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+VITR ++ +E ++ G + +P + LA ++ + +S+
Sbjct: 17 VVITRAAEQQGEAKELLEAKGANVLDLPALVIVPPDHWGPLDDALADLDNFHWLVFSSAN 76
Query: 59 SLSTLPANFCRHTPIFAIGEAS--------ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + R + S +I
Sbjct: 77 GVLAVEQRLQRQQRNLCRLPRGLKIAAVGRKTARLLEELGAPADFVPPSFVAESLIDHFP 136
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
V L+ + D E + + + Y S+ + L + D
Sbjct: 137 VSGWGLTMLLPRVQQGGRTVLADAFGEAGVRVVEVAAYDSRCPEHMAEPAATALADGAVD 196
Query: 169 AILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
AI F + + + L A + + + + + V A
Sbjct: 197 AIAFTSGKTATHTAQLMEKRFGSEWKQHLNGVAVVSIGPQTSRSCREHFGRVDAEADPHD 256
Query: 221 ETSLLKL 227
L++
Sbjct: 257 LEGLVEA 263
>gi|167031230|ref|YP_001666461.1| uroporphyrinogen-III synthase [Pseudomonas putida GB-1]
gi|166857718|gb|ABY96125.1| Uroporphyrinogen-III synthase [Pseudomonas putida GB-1]
Length = 255
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 77/245 (31%), Gaps = 16/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
+++TRP + + + + G +PL + + L + AI + S
Sbjct: 5 RLLLTRPAEDCAALAQSLAEEGVGSSCLPLLAIEPVTLETPQRLLLEGLHGFQAIIVVSK 64
Query: 58 ESLSTLPANFCR------HTPIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ L + F +GEA+A + + G + + L + ++
Sbjct: 65 PAARLLLEQLAKASLQPPRQGWFTVGEATAAVLQGAGLEVSAPPRGDDSEALLALPALRQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNAD 168
+ P ++ + G + L E + ++ Y YP T+ + + +
Sbjct: 125 AVAAPAPRVLIVRGVGGRELLAERLAEQGASVEYLELYRRCLPVYPAGTLMRRIEAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ + + L S +A A+ V T+LL
Sbjct: 185 GLVVSSGQGFEHLQQLAGADWPQLARLPLFVPSPRVAEQARAAGAQQVVDCRGASATALL 244
Query: 226 KLLPL 230
+
Sbjct: 245 AAVQR 249
Score = 35.2 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 27/85 (31%), Gaps = 3/85 (3%)
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA---FLCLSNNIASAIPA 207
+ P+ + L AI+ ++ + A + + + A+ +
Sbjct: 40 VTLETPQRLLLEGLHGFQAIIVVSKPAARLLLEQLAKASLQPPRQGWFTVGEATAAVLQG 99
Query: 208 SYKNVVTVACFPKETSLLKLLPLRR 232
+ V +LL L LR+
Sbjct: 100 AGLEVSAPPRGDDSEALLALPALRQ 124
>gi|87301789|ref|ZP_01084623.1| Uroporphyrinogen-III synthase [Synechococcus sp. WH 5701]
gi|87283357|gb|EAQ75312.1| Uroporphyrinogen-III synthase [Synechococcus sp. WH 5701]
Length = 265
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 70/253 (27%), Gaps = 28/253 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+ +TR ++ + ++ G + +P E LA +++ + +S
Sbjct: 11 VAVTRAEQQLGEARALFERAGARVLDLPALVIGPPDEWGPLDDALAELEAFHWLVFSSVN 70
Query: 59 SLSTLPANFCRHT----------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + R I A+G +A Q G F + +A ++E
Sbjct: 71 GVEAVEQRLQRIGRNLGDRPRGLKIAAVGRKTAARLEQLGAPADFVPPN---FVADSLIE 127
Query: 109 QKVLFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + L+ + E + Y S+ + L+
Sbjct: 128 HFPVSGWGQRLLLPRVQSGGRTLLAEAFAEAGTRVVEAAAYESRCPPHLPLATAAALREG 187
Query: 168 DA--ILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
I F + +V + L S A + + ++ V A
Sbjct: 188 QVEAITFTSGKTVRHTVHLLLQDLGENWRERLESVALVSIGPQTSATCQELLGRVDAEAD 247
Query: 218 FPKETSLLKLLPL 230
L+
Sbjct: 248 PHDLEGLVAACGR 260
>gi|254238044|ref|ZP_04931367.1| uroporphyrinogen-III synthetase [Pseudomonas aeruginosa C3719]
gi|126169975|gb|EAZ55486.1| uroporphyrinogen-III synthetase [Pseudomonas aeruginosa C3719]
Length = 251
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 65/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
+++TRP ++ + + G +PL E+ Y A+ + S
Sbjct: 5 RLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSK 64
Query: 58 ESLSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQK 110
+ R+ P + A+ + + + + +S L + Q
Sbjct: 65 PAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQD 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNAD 168
L ++ + G+ + L + + + Y + YP + + +
Sbjct: 125 SLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVT 214
++ + + + L S +A V
Sbjct: 185 GLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAKMARELGAQRVI 233
>gi|92115223|ref|YP_575151.1| uroporphyrinogen III synthase HEM4 [Chromohalobacter salexigens DSM
3043]
gi|91798313|gb|ABE60452.1| Uroporphyrinogen III synthase HEM4 [Chromohalobacter salexigens DSM
3043]
Length = 251
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 73/239 (30%), Gaps = 13/239 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
IV+TRP + R + + G+ V L + Y + +TS
Sbjct: 6 RIVVTRPGEGGRRLVDALSTAGFEAVHPALMTLQPLAADEVERGAVLDFDLYDVVVVTSP 65
Query: 58 ESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQ 109
+ L R+ P +A+G ++A + + ++ +
Sbjct: 66 FAAECLDEWIDRYWPQLPQGPRFYAVGASTAATLHRTLGIKAKVPDPARGTTSEALLAMR 125
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-AD 168
+ + + +GG + L + + Y A E T+ L
Sbjct: 126 SLTRLDGQRALIVGGSGGRQVMAEALEARGARVAKLALYRRVYTAPDEVTVDWLASGAFT 185
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
A++ + + + S A ++ + S +A+ VA +L+
Sbjct: 186 AMIVTSGELLEHLVSWCGQAALNKPLIVSSQRLATLADTMGFASPHVASGATPDALVTA 244
>gi|152989208|ref|YP_001351321.1| uroporphyrinogen-III synthase [Pseudomonas aeruginosa PA7]
gi|150964366|gb|ABR86391.1| uroporphyrinogen-III synthetase [Pseudomonas aeruginosa PA7]
Length = 251
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 66/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
+++TRP ++ + + G +PL E+ + Y A+ + S
Sbjct: 5 RLLLTRPEEECAALAATLGEAGVHCSSLPLLAIDPLEETPEQRALMLDLDRYCAVLVVSK 64
Query: 58 ESLSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQK 110
+ R+ P + A+ + + + + +S L + Q
Sbjct: 65 PAARLGLERLDRYWPQPPQQAWFSVGAATAAILEDYGLCVTYPEQGDDSEALLALSAFQD 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNAD 168
L ++ + G+ + L + + + Y + YP + + +
Sbjct: 125 SLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPEYPPGEPLARVRAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVT 214
++ + + + L S +A V
Sbjct: 185 GLVVSSGQGLQNLYQLAAADWPEICRLPLFVPSPRVAEMARELGAQRVI 233
>gi|16974837|pdb|1JR2|A Chain A, Structure Of Uroporphyrinogen Iii Synthase
gi|16974838|pdb|1JR2|B Chain B, Structure Of Uroporphyrinogen Iii Synthase
Length = 286
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 71/251 (28%), Gaps = 27/251 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + + ++ G ++P+ F F L+ + YG +
Sbjct: 22 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLI 81
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ ++ + K + + +
Sbjct: 82 FTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCG 141
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ + PL++ G + L + I + I Y + + +
Sbjct: 142 NAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNL 201
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + A A+ A V
Sbjct: 202 NSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVS 261
Query: 214 TVACFPKETSL 224
A P +L
Sbjct: 262 CTAESPTPQAL 272
>gi|4557873|ref|NP_000366.1| uroporphyrinogen-III synthase [Homo sapiens]
gi|122849|sp|P10746|HEM4_HUMAN RecName: Full=Uroporphyrinogen-III synthase; Short=UROIIIS;
Short=UROS; AltName: Full=Hydroxymethylbilane hydrolyase
[cyclizing]; AltName: Full=Uroporphyrinogen-III
cosynthase
gi|11526827|gb|AAG36795.1|AF230665_1 uroporphyrinogen III synthase [Homo sapiens]
gi|337463|gb|AAA60273.1| uroporphyrinogen III synthase (EC 4.2.1.75) [Homo sapiens]
gi|12803493|gb|AAH02573.1| Uroporphyrinogen III synthase [Homo sapiens]
gi|55959619|emb|CAI12087.1| uroporphyrinogen III synthase [Homo sapiens]
gi|119569606|gb|EAW49221.1| uroporphyrinogen III synthase (congenital erythropoietic
porphyria), isoform CRA_a [Homo sapiens]
gi|119569607|gb|EAW49222.1| uroporphyrinogen III synthase (congenital erythropoietic
porphyria), isoform CRA_a [Homo sapiens]
gi|123982066|gb|ABM82862.1| uroporphyrinogen III synthase (congenital erythropoietic porphyria)
[synthetic construct]
gi|123996895|gb|ABM86049.1| uroporphyrinogen III synthase (congenital erythropoietic porphyria)
[synthetic construct]
gi|189054738|dbj|BAG37410.1| unnamed protein product [Homo sapiens]
Length = 265
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 71/251 (28%), Gaps = 27/251 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + + ++ G ++P+ F F L+ + YG +
Sbjct: 1 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ ++ + K + + +
Sbjct: 61 FTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ + PL++ G + L + I + I Y + + +
Sbjct: 121 NAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + A A+ A V
Sbjct: 181 NSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVS 240
Query: 214 TVACFPKETSL 224
A P +L
Sbjct: 241 CTAESPTPQAL 251
>gi|296221446|ref|XP_002756746.1| PREDICTED: uroporphyrinogen-III synthase-like [Callithrix jacchus]
Length = 265
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 70/251 (27%), Gaps = 27/251 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + + ++ G ++P+ F + F L+ + YG +
Sbjct: 1 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLTSFSEKLSHPEDYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ + + K + +
Sbjct: 61 FTSPRAVEAAELCLDQDNKTGVWERSLKEKWNAKSVYVVGDATASLVSKIGLDTEGETCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ + PL++ G + L + I + I Y + + +
Sbjct: 121 NAEKLAEYICSRESSALPLLFPCGNLKREILPKTLKDKGIAMESITVYQTIPHPGIQGNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + A A+ A V
Sbjct: 181 NSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVS 240
Query: 214 TVACFPKETSL 224
A P +L
Sbjct: 241 CTAESPTPQAL 251
>gi|209730634|gb|ACI66186.1| Uroporphyrinogen-III synthase [Salmo salar]
Length = 272
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 75/263 (28%), Gaps = 32/263 (12%)
Query: 1 MYIVITR-PIKKAL---RTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIA 53
M++++ + P + +++ G+ ++P+ F + L + +G +
Sbjct: 1 MHVLLLKEPREGGSGPDPYIKELASRGHKATLIPVLSFTFVSLNTLSDKLFQPEQHGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV-- 111
TS ++ + K + + ++ +
Sbjct: 61 FTSPRAVEAVRMCLEDDERREQWNNDIKDKWNAKSIYVVGKATAALVENLGLVPLGEDTG 120
Query: 112 ------------LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
T PL + G + L E+ +PL + Y + E
Sbjct: 121 TADVLSRLILEREDTNILPLFFPCGSIKREVLPTALRENGVPLDTLMVYQTAQHPDLEKN 180
Query: 160 MKNLLQNADAIL---FYARSSVLYFFS----LPLPAKISAAFLCLSNNIASAIPASYKNV 212
+KN F++ S V + L F + A A+ A +V
Sbjct: 181 LKNHFTEQGVPASIAFFSPSGVKFCLEPVRRLSGEQLKQIKFAAIGPTTADAMTAEGLSV 240
Query: 213 VTVACFPKETSL----LKLLPLR 231
A P L K L +
Sbjct: 241 SCSADKPTAEHLATGIAKALQRQ 263
>gi|241206705|ref|YP_002977801.1| uroporphyrinogen-III synthase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860595|gb|ACS58262.1| Uroporphyrinogen III synthase HEM4 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 235
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 17/240 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A RT ++++ +G+ P+++PL +HD + A+ + AIA+TS+E++
Sbjct: 1 MRVLVTRPAHSAERTAQRLRDLGHEPLLLPLRQPLHDSAAAAGALAATGSAIAVTSAEAI 60
Query: 61 STLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
L A + P+FA+GE +A AR GF + + N +LA ++ Q
Sbjct: 61 RVLSALGEQLHPHLARPLFAVGETTAEEARSLGFRSVTSSQGNGRDLADLVATQGADG-- 118
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFY 173
L+YL G PR FE L E I + +CY Q I + ++ + DAILFY
Sbjct: 119 ---LLYLAGMPRAETFEAGLRELGIRFSIAECYRMQPIVPGQPEIEAIFSRSRPDAILFY 175
Query: 174 ARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+R + FF +P P LCLS +A AIPA+ K V ++ E SLL LL
Sbjct: 176 SRQTAEDFFRVPELRSAVPEHSGIRILCLSEAVAEAIPAALKKSVEISPMADEKSLLSLL 235
>gi|226946766|ref|YP_002801839.1| uroporphyrinogen-III synthase [Azotobacter vinelandii DJ]
gi|226721693|gb|ACO80864.1| Uroporphyrinogen-III synthase [Azotobacter vinelandii DJ]
Length = 262
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 71/230 (30%), Gaps = 17/230 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
+++TRP ++ + + + G +PL E+ L Y A+ + S
Sbjct: 11 RLLLTRPAEECAVLADCLSEAGICSSSLPLLAIEPLAEAPELRSLFLDLDRYSAVIVVSK 70
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKG--------FTQIFHGKDNSINLAKIIVEQ 109
+ R+ P + + R G ++S L +
Sbjct: 71 PAARLGLELLDRYWPQPPADQCWFGVGRATGEILADYGLTVAWPTAGEDSEALLALPGLA 130
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
L PQ ++ L G+ + L + + ++ Y YP T+ ++
Sbjct: 131 TALAVPQPRVLILRGEGGREFIAESLRSRGLAVDHVELYRRTLPDYPPGTLLERVRTERL 190
Query: 168 DAILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
+ + + + L PA + S +A A+ V
Sbjct: 191 NGLQISSGQGFEHLRQLAAADWPALLRIPLFVPSPRVAELARAAGFRTVV 240
>gi|119503706|ref|ZP_01625788.1| hypothetical protein MGP2080_01246 [marine gamma proteobacterium
HTCC2080]
gi|119460214|gb|EAW41307.1| hypothetical protein MGP2080_01246 [marine gamma proteobacterium
HTCC2080]
Length = 660
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 59/235 (25%), Gaps = 9/235 (3%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV-FLAMQQSYGAIAITSSESLST 62
V+TRP Q +++ G + PL L S ++
Sbjct: 6 VLTRPGGVVEPLQLVLEQRGVDTFVQPLINIASISVEHRELITLYPGDICIFISVNAVEQ 65
Query: 63 LPANFCRHTPI--FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+N I A + + ++ + K ++
Sbjct: 66 GLSNLAPQLRELGCPILAVGRATASAISAAGFDVSVPSQADSEGLLGLDILHGVKGKQVV 125
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF--YARSSV 178
+ G+ + L E + CY L + ++F + V
Sbjct: 126 IVKGEGGRGLLAEALRERGADVVSYVCYRRDPTGIDAGQFCWQLCEREHVVFQASSGEIV 185
Query: 179 LYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L P + + + S +A V A + S L +
Sbjct: 186 EQLTELLGQGGQPNLLDSPVIVPSGRVAKIAVGLGWTNVITAAGAGDDSFLSAIE 240
>gi|16079866|ref|NP_390692.1| uroporphyrinogen III cosynthase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221310754|ref|ZP_03592601.1| uroporphyrinogen III cosynthase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221315079|ref|ZP_03596884.1| uroporphyrinogen III cosynthase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221319998|ref|ZP_03601292.1| uroporphyrinogen III cosynthase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221324280|ref|ZP_03605574.1| uroporphyrinogen III cosynthase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|399875|sp|P21248|HEM4_BACSU RecName: Full=Uroporphyrinogen-III synthase; Short=UROS; AltName:
Full=Hydroxymethylbilane hydrolyase [cyclizing];
AltName: Full=Uroporphyrinogen-III cosynthase
gi|143038|gb|AAA22513.1| uroporphyrinogen III synthase [Bacillus subtilis]
gi|2635279|emb|CAB14774.1| uroporphyrinogen III cosynthase [Bacillus subtilis subsp. subtilis
str. 168]
Length = 262
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 72/242 (29%), Gaps = 17/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYF-IHDRESVFLA---MQQSYGAIAITSSE 58
+++TR +A Q+K++ +G V+ L F V + G + TS
Sbjct: 12 VLVTRNKAQAASFQQKVEALGGKAVLTSLITFRRALPNDVAEQVREDLAAPGWLVFTSVN 71
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ-----KVLF 113
+ + I + A + + H + + I EQ K
Sbjct: 72 GADFFFSYLKENQLILPAHKKIAAVGEKTARRLKMHNVSVDVMPQEYIAEQLADALKQHA 131
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAIL 171
P + + + G + L+ ++ Y + +K+ + D +
Sbjct: 132 EPGETITVMKGNLSRDVIKQELVPLGFEVKEWVLYETIPDEEGIEALKDAAGQYSFDYVT 191
Query: 172 FYARSSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + S+V F + + + A+ +L+
Sbjct: 192 FTSSSTVHTFMHVLGEELKKWKANGTACISIGPLTNDALLTYGITSH-TPDTFTIDGMLE 250
Query: 227 LL 228
L+
Sbjct: 251 LM 252
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 6/123 (4%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIP--LRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
K ++ K + F+ + L + + ++ L ++F
Sbjct: 8 KGKTVLVTRNKAQAASFQQKVEALGGKAVLTSLITFRRALPNDVAEQVREDLAAPGWLVF 67
Query: 173 YARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +FFS ++ + A + +V + L L
Sbjct: 68 TSVNGADFFFSYLKENQLILPAHKKIAAVGEKTARRLKMHNVSVDVMPQEYIAEQLADAL 127
Query: 229 PLR 231
Sbjct: 128 KQH 130
>gi|84489983|ref|YP_448215.1| hypothetical protein Msp_1191 [Methanosphaera stadtmanae DSM 3091]
gi|84373302|gb|ABC57572.1| HemD [Methanosphaera stadtmanae DSM 3091]
Length = 259
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 73/249 (29%), Gaps = 25/249 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSE 58
+VITRPI+++ + I K G P+++P + +++ I TS
Sbjct: 10 NVVITRPIERSQTLSDMILKKGGKPIIVPTLELQLVESKELVYIIENIETFDWIVFTSPA 69
Query: 59 SLSTLPANF---CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + I IG + + GF KD + ++ K +
Sbjct: 70 GVKSFFKLCKLDIIPSKIAVIGVKTEEELLKYGFKPDLIPKDFTA--EGLLESFKSINLK 127
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA----DAIL 171
K + L ++ + + + Y S ++ D I
Sbjct: 128 NKNVALPRTLSAREVLPKGLEDYGASVLIAEAYTSGIPHDTTKIIELCNDIIDGLVDIIT 187
Query: 172 FYARSSVLYFFSLPLPAKIS------------AAFLCLSNNIASAIPASYKNVVTVACFP 219
F + +V + ++ S + A ++
Sbjct: 188 FTSPLTVKNLMEVYKNSQPSRLDELILALKSRVVVASIGPITAKSLSEYGI-CTIEPSRY 246
Query: 220 KETSLLKLL 228
+++ +
Sbjct: 247 TVKDMVEAI 255
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 1/119 (0%)
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE-TTMKNLLQNA 167
K ++ R+ D +++ ++ Q + E + ++
Sbjct: 1 MSGNNFNNKNVVITRPIERSQTLSDMILKKGGKPIIVPTLELQLVESKELVYIIENIETF 60
Query: 168 DAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D I+F + + V FF L I + + + + LL+
Sbjct: 61 DWIVFTSPAGVKSFFKLCKLDIIPSKIAVIGVKTEEELLKYGFKPDLIPKDFTAEGLLE 119
>gi|72383318|ref|YP_292673.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. NATL2A]
gi|72003168|gb|AAZ58970.1| uroporphyrinogen-III synthase [Prochlorococcus marinus str. NATL2A]
Length = 266
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 61/253 (24%), Gaps = 23/253 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
I+ITR ++ ++ +K G +P + L ++ I +S+
Sbjct: 12 KIIITRAQEQTSEARKIFRKNGAEVFDLPSLVIGPPDDWAPLDDALKKISTFDWIIFSSA 71
Query: 58 ESLSTLPANFC-------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + + + I A +A ++E
Sbjct: 72 NGVRNVEDRMREIGLSLSKISKTIQIAAVGRKTASLLSDMDAEISFVPPSFVADSLLEYF 131
Query: 111 VLFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NA 167
L D + + + Y S L+
Sbjct: 132 PQNQKGLKLFIPRVQTGGRSILSDSFRLNGAEVTEVAAYESSCPKDVPQKTIEALKSGEI 191
Query: 168 DAILFYARSSVLYFFSLPLPAK--------ISAAFLCLSNNIASAIPASYKNVVTVACFP 219
D I F + +V+ SL + + + + A
Sbjct: 192 DIIAFTSGKTVINTVSLFNKYFGGNWFKLIEKIKLVSIGPQTTISCKKLIRKPDKEAEPH 251
Query: 220 KETSLLKL-LPLR 231
LL L L+
Sbjct: 252 DLEGLLNACLELK 264
>gi|323525183|ref|YP_004227336.1| hypothetical protein BC1001_0822 [Burkholderia sp. CCGE1001]
gi|323382185|gb|ADX54276.1| protein of unknown function DUF513 hemX [Burkholderia sp. CCGE1001]
Length = 673
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 64/264 (24%), Gaps = 37/264 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+VITRP ++ ++ G + PL + L + Y + S
Sbjct: 21 VVITRPAGQSSELIARLAAAGVAALDFPLIDIAPVADDAPLRAALGSLERYSLVVFVSPN 80
Query: 59 SLSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAK 104
++ A P A SA + + +
Sbjct: 81 AIDHAFARSSAIWPHALPVGVVGPGSVRALARHGVSAPAHQVISPAAGVDDDNGRFDSEG 140
Query: 105 IIVEQK----VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPETT 159
+ K ++ + G D L E + + Y
Sbjct: 141 LFAAIDAALGEANLEGKRVLIVRGDGGREWLADRLREAGAEVETVAAYRRLVPEPSIAAW 200
Query: 160 MKNL---LQNADAILFYARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPAS 208
+ A L + V L A + IA A
Sbjct: 201 ARVHQLLAGEPHAWLLTSSEGVRNLHELAQEHLTADEIAQLKRATLVAPHPRIAQTARAL 260
Query: 209 YKNVVTVACFPKE---TSLLKLLP 229
+ +TV+ E +LL LP
Sbjct: 261 GFDRITVSGAGDERIAQALLSALP 284
>gi|83945094|ref|ZP_00957460.1| putative uroporphyrinogen III synthase [Oceanicaulis alexandrii
HTCC2633]
gi|83851876|gb|EAP89731.1| putative uroporphyrinogen III synthase [Oceanicaulis alexandrii
HTCC2633]
Length = 241
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 89/236 (37%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TR A R+ + + G+ + + + IA+TS S
Sbjct: 8 RVLVTRAEPGATRSCAALAERGFDAINA---ATAVLKAHEVALNLKGVSLIAVTSPFGAS 64
Query: 62 TL-PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
L A R P+ A+G+ +A R+ GF ++ ++ +L +I E+ P+ ++
Sbjct: 65 CLATATSERRLPVIAVGDVTASRLREAGFEKVNSASGDARDLLAMIRERA----PEGEVL 120
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
++ G + L I R Y ++ ++ + L +L ++
Sbjct: 121 HVRGVDQTGDLSAELNARGIRARSEILYAAEPVSALPGAVWASLAAGATVLIHSAKGAER 180
Query: 181 FFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
F L A ++A + +S A + + + +A P E +L L R
Sbjct: 181 FNDLANAADQVEALLAARIVAISTAAAEPLKSLGVARLKIARRPDEDALFDALENR 236
>gi|284047685|ref|YP_003398024.1| uroporphyrin-III C-methyltransferase [Acidaminococcus fermentans
DSM 20731]
gi|283951906|gb|ADB46709.1| uroporphyrin-III C-methyltransferase [Acidaminococcus fermentans
DSM 20731]
Length = 489
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 63/239 (26%), Gaps = 15/239 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++T + +G +P+ +++ YG + TS +
Sbjct: 253 KILVTGTPVFCGEVARALASVGKTVTELPILELEPLFQNI-PEDFDRYGWLVFTSRNGVR 311
Query: 62 TLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
F IG+ +A +GF + + ++ + +
Sbjct: 312 LFFRWFRSARQDFRRLGQVRFACIGQGTAEELADQGFQADLMPEVFTAEDLGRLLGETLE 371
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ L + + L R + Y + ++F
Sbjct: 372 AGD--RCLLLRAEEGSPDLVRELDRAGRKYRDVPLYRIRTRKILTG--AETRLAPQVMIF 427
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ V FF A LC+ A A + + V A + L +
Sbjct: 428 GSGRGVREFFRRFTLA-PETRVLCIGPVTARAAREAGCSQVETAAIHSAAGIRDALEKK 485
>gi|158320362|ref|YP_001512869.1| uroporphyrin-III C-methyltransferase [Alkaliphilus oremlandii
OhILAs]
gi|158140561|gb|ABW18873.1| uroporphyrin-III C-methyltransferase [Alkaliphilus oremlandii
OhILAs]
Length = 496
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 66/236 (27%), Gaps = 19/236 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I+ITRP + + + + ++G V P + + I TS+ +
Sbjct: 260 KILITRPKQTIGKLSQMLWELGAETVEYPCIRTSTIDFDLNMNHL---QWIVFTSAVGVK 316
Query: 62 TLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
I +G +A + G F +
Sbjct: 317 AFFDKLFTMKMDSRCLHDKKIAVVGSETAAELLKYGIRADFIPSVFDAEHLATELLNSGQ 376
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
T + + K + L +H + + + Y + + + + D + F
Sbjct: 377 ITSKDQVGVFRAKTGSEDLVRILTDHNVEVSDVAVYETNYVKNHKIDV----NKFDYVAF 432
Query: 173 YARSSVLYFFSLPLPAK--ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ S V F S +C+ AS T++ + ++
Sbjct: 433 TSASCVQGFVESFGEDADFSSVNAVCIGKQTASMAKQYG-MNTTISDIATISGIVD 487
>gi|126272543|ref|XP_001362178.1| PREDICTED: similar to Uroporphyrinogen-III synthase (UROS)
(Uroporphyrinogen-III cosynthetase) (Hydroxymethylbilane
hydrolyase [cyclizing]) (UROIIIS) [Monodelphis
domestica]
Length = 261
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 78/257 (30%), Gaps = 27/257 (10%)
Query: 1 MYIVITR-PIKKAL---RTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIA 53
M +++ + P +++ G+ ++P+ F S L+ ++YG +
Sbjct: 1 MKVLLLKEPKDDGSGQDPYVQELGSHGFEATLIPVLSFEFLSLQSFSEKLSRPEAYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ + + + ++ K + +
Sbjct: 61 FTSPRAVEAVELCLEKSGQLQDWKKSLKEKWLAKPAYVVGQATASLVRKLGLATEGEKCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ PL++ G + + L + +P+ I Y + +
Sbjct: 121 NGEKLAEYICSQEPVTLPLLFPCGTLKGEALPNMLQQKGVPMESITVYQKIPHPEIQDAL 180
Query: 161 KNLLQNADAIL---FYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVV 213
++ + F++ S + + S F + A A+ ++ ++
Sbjct: 181 RSYFSSQGTPASIAFFSPSGLSHGLSYIQEFSGDSFDQIKFAAIGPTTARALTSAGLPLI 240
Query: 214 TVACFPKETSLLKLLPL 230
A P L L
Sbjct: 241 CTAEKPCPHDLAAGLQK 257
>gi|322389390|ref|ZP_08062944.1| uroporphyrinogen-III synthase [Streptococcus parasanguinis ATCC
903]
gi|321143878|gb|EFX39302.1| uroporphyrinogen-III synthase [Streptococcus parasanguinis ATCC
903]
Length = 241
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 69/231 (29%), Gaps = 5/231 (2%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-ESVFLAMQQSYGAIAITSSESLS 61
I+ TR + ++ Q + + + PL + + + TS+ ++
Sbjct: 6 IIFTREQEPSVELQTLLDQNQVRWMHAPLICTQGNPIPPMLDDKLDKADWVFFTSANTVK 65
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
I +IG ++ L ++ F I E + + +++
Sbjct: 66 LFLPYLKPDLKIASIGSQTSKLLKEHDIDVTFESSS--QYGVDFIKEWASRYGYHQAILF 123
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYARSSVL 179
N + L E + Y + ++ L+ F + S+
Sbjct: 124 PHSDLANPTYPKMLQELGHDVYAWPLYQTVANQEGIAKIRELLSLKEPCVWTFASPSAWD 183
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
F+ L + A A+ +V + P L++L+
Sbjct: 184 VFYQEGLSLPKHHQIGVIGETTAKAVLDCGVSVNYIPSSPSMVKLVELIIK 234
>gi|29655355|ref|NP_821047.1| uroporphyrinogen-III synthase [Coxiella burnetii RSA 493]
gi|29542627|gb|AAO91561.1| uroporphyrinogen-III synthase [Coxiella burnetii RSA 493]
Length = 268
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 85/257 (33%), Gaps = 30/257 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-------ESVFLAM---------- 45
I+ITRP + ++ I++ G ++ P S
Sbjct: 11 IMITRPEWQGELLKKAIERRGGAVILFPTLIIKPINKCNYSPFASASFPPSRESGSPDDK 70
Query: 46 ------QQSYGAIAITSSESLSTLPANFCR-HTPIFAIGEASACLARQKGFTQIFHGKDN 98
S + S+ ++ P + + AIG +A Q+G + +
Sbjct: 71 MTKAGFLNSSDILIFLSANAVKHSPILNFKAEQKLVAIGTGTAAALFQRGLSVDAVPEHF 130
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
S ++ + K + G+ + E+ LI + I Y + +
Sbjct: 131 SS--EGLLDLPLLHQVTGKTIAIFCGENSRPYLENELIHRGANVFSIITYRRERPVVNKK 188
Query: 159 TMKNLLQNA-DAILFYARSSVLYFFSLP---LPAKISAAFLCLSNNIASAIPASYKNVVT 214
T+ L AI+ + S+ +L + +S + + + ++V
Sbjct: 189 TIDALTHQTLHAIVSTSAESLQNLCTLFESHQHWLHRIPLVVISKRMENLAKSQGFHLVL 248
Query: 215 VACFPKETSLLKLLPLR 231
+A P E +++K+L +
Sbjct: 249 LADNPGEKAIIKVLSTK 265
>gi|76666798|emb|CAJ31176.1| uroporphyrinogen III synthase/methyltransferase [uncultured
sulfate-reducing bacterium]
Length = 518
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 79/253 (31%), Gaps = 25/253 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS----YFIHDRESVFLAMQQSYGAIAITSS 57
+++TRP +++ ++++G + P F D +Q+ + TS
Sbjct: 261 RVMVTRPADQSVALYGDLRELGAEVLAYPTLATVEDFRSDDWDALRRIQEKERWVVFTSE 320
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + I A G+ +A F + +
Sbjct: 321 NGVRYFLEQWFATIGDIRGLNDYRIAAAGDGTARSLNANNLAPDFVPT---RASMAALAQ 377
Query: 109 QKVLFTPQKP--LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-Q 165
Q P ++ + G RN E L E + + Y + + + L
Sbjct: 378 QMAEKVPMSKATVVRVRGNARNDPIERALRETGAQVVSLPVYRTFPTKWRSAVKEKLFAY 437
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPK 220
D ILF + ++V + ++ AA + + + I V +
Sbjct: 438 PPDVILFTSGTAVDGLAANLSARELKELSSGAAVVSIGPATSRTIRTHGITVELESKVHT 497
Query: 221 ETSLL-KLLPLRR 232
SLL +L+ R
Sbjct: 498 MPSLLEELVAHHR 510
>gi|319946909|ref|ZP_08021143.1| uroporphyrinogen-III synthase [Streptococcus australis ATCC 700641]
gi|319746957|gb|EFV99216.1| uroporphyrinogen-III synthase [Streptococcus australis ATCC 700641]
Length = 241
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 69/231 (29%), Gaps = 5/231 (2%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-ESVFLAMQQSYGAIAITSSESLS 61
I+ TR + ++ Q + + + PL + + + TS+ ++
Sbjct: 6 IIFTREQEPSVELQTLLYQNQVRWMHAPLICTQGNPIPPMLDDKLDKADWVFFTSANTVK 65
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
I +IG ++ L ++ F I E + + +++
Sbjct: 66 LFLPYLKPDLKIASIGSQTSKLLKEHDIDVTFESSS--QYGVDFIKEWASRYGYHQAILF 123
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYARSSVL 179
N + L E + Y + ++ L+ F + S+
Sbjct: 124 PHSDLANPTYPKMLQELGHDVYAWPLYQTVANQEGIAKIRELLSLKEPCVWTFASPSAWD 183
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
F+ L + A A+ +V + P L++L+
Sbjct: 184 VFYQEGLSLPKHHQIGVIGETTAKAVLDCGVSVNYIPSSPSMVKLVELIIK 234
>gi|313205043|ref|YP_004043700.1| uroporphyrinogen iii synthase hem4 [Paludibacter propionicigenes
WB4]
gi|312444359|gb|ADQ80715.1| Uroporphyrinogen III synthase HEM4 [Paludibacter propionicigenes
WB4]
Length = 267
Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 75/244 (30%), Gaps = 19/244 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSSE 58
I+ TRP + R + +Q G + P+ D L+ QSY I TS
Sbjct: 9 IISTRPEVENDRIKSLLQAKGARVLDFPMISTECVLLSDEIKTVLSDIQSYNWIVFTSKN 68
Query: 59 SLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + IG+A+ + T + + ++ E
Sbjct: 69 GVICFCELLQQLGIDPQRLADKKFAVIGKATGEAMQSSIGTPALISRGRTA--EDLLQEF 126
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ T ++ + E L + ID Y + D+ Y + + +
Sbjct: 127 QQQITSTDKVLLALAALADDKLEQGLTPL-CDVTRIDVYQTYDVDYDTHPALDCISKNEY 185
Query: 170 --ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
ILF + S F + +I+ C+ + + + + V+ S
Sbjct: 186 DLILFTSPSGYRNFHRITEKLEINELKAACIGTTTEAEMRRLGASPLLVSPQSDADSFAN 245
Query: 227 LLPL 230
+
Sbjct: 246 EIER 249
>gi|221219868|gb|ACM08595.1| Uroporphyrinogen-III synthase [Salmo salar]
Length = 261
Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 74/258 (28%), Gaps = 28/258 (10%)
Query: 1 MYIVITR-PIKKAL---RTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M++++ + P + +++ G+ ++P+ F ++ L + +G +
Sbjct: 1 MHVLLLKEPREGGSGPDPYIKELASRGHRATLIPVLSFTFVSLNILSDKLFQPEQHGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV-- 111
TS ++ + K + + ++ +
Sbjct: 61 FTSPRAVEAVRMCLEDDERREQWNNDIKDKWNAKSIYVVGKATAALVENLGLVPLGEDTG 120
Query: 112 ------------LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
T PL + G + L E+ +PL + Y + E
Sbjct: 121 TADVLSRLILEREDTNILPLFFPCGSIKREVLPTALRENGVPLDTLMVYQTAQHPDLEKN 180
Query: 160 MKNLLQNADAIL---FYARSSVLYFFS----LPLPAKISAAFLCLSNNIASAIPASYKNV 212
+KN F++ S V + L F + A A+ A +V
Sbjct: 181 LKNHFTEQGVPASIAFFSPSGVKFCLETVRRLSGEQLKQIKFAAIGPTTADAMTAEGLSV 240
Query: 213 VTVACFPKETSLLKLLPL 230
A P L +
Sbjct: 241 SCSADKPTAEHLATGIAK 258
>gi|229366820|gb|ACQ58390.1| Uroporphyrinogen-III synthase [Anoplopoma fimbria]
Length = 261
Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 83/260 (31%), Gaps = 32/260 (12%)
Query: 1 MYIVITRPIKKAL----RTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIA 53
M++++ + + +++ G+ ++P+ F + L + +G +
Sbjct: 1 MHVLLLKEPRDGESGPDPYIKELASHGHKATLIPVLSFKFVSLNTLSDKLFQPEKHGGLI 60
Query: 54 ITSSESLSTLPANF----------------CRHTPIFAIGEASACLARQKGFTQIFHGKD 97
TS ++ + I+ +G+A+A R G +
Sbjct: 61 FTSPRAVEAVKMCLEADERREEWNSSVKDKWNSKSIYVVGKATAAAVRNLGLNPLGEDTG 120
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ L+ +I+E++ P PL + G + L + +PL + Y + + E
Sbjct: 121 TADVLSSLIIEREDTNIP--PLFFPCGSIKREVLPTALRGNGVPLETLTVYQTAEHPDLE 178
Query: 158 TTMKNLLQNADAIL---FYARSSVLYFFS----LPLPAKISAAFLCLSNNIASAIPASYK 210
+ N F++ S V + L F + A+ A
Sbjct: 179 KNLNNYFTEQGTPASIAFFSPSGVKFCLEVVRRLSGEHMAQIKFAAIGPTTQDAMTAEGL 238
Query: 211 NVVTVACFPKETSLLKLLPL 230
V A P L +
Sbjct: 239 CVSCAAEKPTAEHLAAAIAK 258
>gi|114633279|ref|XP_508102.2| PREDICTED: uroporphyrinogen-III synthase isoform 2 [Pan
troglodytes]
Length = 265
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 71/251 (28%), Gaps = 27/251 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + + ++ G ++P+ F F L+ + YG +
Sbjct: 1 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSI 100
TS ++ ++ + K + + +
Sbjct: 61 FTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ + PL++ G + L + I + I Y + + +
Sbjct: 121 NAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTIAHPGMQGNL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + A A+ A V
Sbjct: 181 NSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVS 240
Query: 214 TVACFPKETSL 224
A P +L
Sbjct: 241 CTAESPTPQAL 251
>gi|284161443|ref|YP_003400066.1| uroporphyrinogen III synthase HEM4 [Archaeoglobus profundus DSM
5631]
gi|284011440|gb|ADB57393.1| Uroporphyrinogen III synthase HEM4 [Archaeoglobus profundus DSM
5631]
Length = 231
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 81/239 (33%), Gaps = 26/239 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M + I RP A T + +K G+ + +P + F ++Y + +TS +
Sbjct: 1 MKVAILRPEHVASETVDMFKKQGFDVISIPFIKIVPRN---FEFDPRNYDVLIVTSRTAA 57
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ +H + AIG+ +A R+ G H K + + + E+ K +
Sbjct: 58 RIVVEKGIKHENVIAIGKKTAEELRKAGI----HAKIPTRFDSTTLYEEFKDELKGKRVA 113
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
L + + + + Y + + + D I+F +R +V
Sbjct: 114 ILRSNRGDPILLNL-----PNVDEVILYDIEFEWGEKQKKFLNDLDFDVIVFSSRMTVKS 168
Query: 181 FFSLPLPAKISA-------AFLCLSNNIASAIPASYKNVVTVACFPKE---TSLLKLLP 229
FF L I + + + A P+E S+LKLL
Sbjct: 169 FFGLADHLGIDIVERLKDKIVIAIGPPTREELSKYG----IEALMPEEWTFDSILKLLK 223
>gi|195953015|ref|YP_002121305.1| Uroporphyrinogen III synthase HEM4 [Hydrogenobaculum sp. Y04AAS1]
gi|195932627|gb|ACG57327.1| Uroporphyrinogen III synthase HEM4 [Hydrogenobaculum sp. Y04AAS1]
Length = 228
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 66/226 (29%), Gaps = 12/226 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TR +K L +++ + +P+ I F + I +S +++
Sbjct: 3 KLLLTREEEKNLESKKIFSSYNINTISLPMIETIP---KEFELKDFDFDCIIFSSRKAVE 59
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
N ++ + + K I+ K L
Sbjct: 60 IFFKNLHICKNAKINVYIVGEKTKEYFLGFYNTKNLIARDSIKEILP----IVNCKTLWI 115
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
++ + + +++ Y ++ Y + L+ + + F + S+ L
Sbjct: 116 RTDFELPEDIKNMVKNK--DIFILEAYKTKHKIYELRKVLETLKAVNGVFFASPSAFLGL 173
Query: 182 FSLPLPAKISAA---FLCLSNNIASAIPASYKNVVTVACFPKETSL 224
K + N A AI V V P S+
Sbjct: 174 LKNLQNYKYILNEKDIFAIGNTTADAIKNEGFQVTYVPQKPSVESI 219
>gi|313901686|ref|ZP_07835117.1| Uroporphyrinogen III synthase HEM4 [Thermaerobacter subterraneus
DSM 13965]
gi|313468037|gb|EFR63520.1| Uroporphyrinogen III synthase HEM4 [Thermaerobacter subterraneus
DSM 13965]
Length = 534
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 27/258 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITSSE 58
+ +TR ++A+ E ++++G V +PL L S +TS
Sbjct: 271 RVAVTRAPEQAVGLAELLRQLGATVVEIPLIGVEPAAGERELDRELESASGSWWVLTSGN 330
Query: 59 SLSTLPANFCRHTP--------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ L A+ + ++ A++ E
Sbjct: 331 GAAALARRLDALGRDARALAGARVAVVGEATRRFVRETLGLRPDLMPAEFTGARLWDELA 390
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-- 168
TP++ +++ G + LR Y + + LL N
Sbjct: 391 RRITPRQRVVWPRGDRAALAAARPVEAAGGDLRAPVVYRTVLRHDQAAVLVELLANRQVD 450
Query: 169 AILFYARSSVLYFFSLP--------------LPAKISAAFLCLSNNIASAIPASYKNVVT 214
+ + S+ +C+ A A V
Sbjct: 451 VVTLASPSAAEALAGAAGPGGPGRFFRGDGQGDGAGRPRVVCIGPRTAQRAAALGLPVDG 510
Query: 215 VACFPKETSLLKLLPLRR 232
V L+ L +
Sbjct: 511 VPRRYTAAGLVAALLELK 528
>gi|116071464|ref|ZP_01468732.1| Uroporphyrinogen-III synthase [Synechococcus sp. BL107]
gi|116065087|gb|EAU70845.1| Uroporphyrinogen-III synthase [Synechococcus sp. BL107]
Length = 272
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 63/249 (25%), Gaps = 22/249 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR ++ +E ++ G + +P + LA ++ + +S+
Sbjct: 17 VVVTRAAEQQGEARELLEAKGANVLDLPALVIVPPDHWGPLDDALADLDNFHWLVFSSAN 76
Query: 59 SLSTLPANFCRHTPIFAIGEAS--------ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + R S + S +I
Sbjct: 77 GVLAVEQRLQRQQRSLCRLPRSLKIAAVGRKTARLLEELGAPADFVPPSFVAESLIDHFP 136
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
V L+ D E + + + Y S+ + L + D
Sbjct: 137 VSGWGLTMLLPRVQHGGRTVLADAFGEAGVRVVEVAAYDSRCPDHIAEPAATALADGAVD 196
Query: 169 AILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
I F + + + L A + + + + V A
Sbjct: 197 VIAFTSGKTATHTAQLMERRFGSEWEQHFNGVAVVSIGPQTSRCCREHFGRVDAEADPHD 256
Query: 221 ETSLLKLLP 229
L++
Sbjct: 257 LEGLVEACA 265
>gi|254498736|ref|ZP_05111452.1| uroporphyrinogen III methylase [Legionella drancourtii LLAP12]
gi|254352064|gb|EET10883.1| uroporphyrinogen III methylase [Legionella drancourtii LLAP12]
Length = 251
Score = 92.6 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 75/241 (31%), Gaps = 19/241 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV-FLAMQQSYGAIAITSSESL 60
++ TRP +A I+ + + +P + + L + S+ ++
Sbjct: 9 RVLNTRPQGQAELLSNAIRAADGVVLELPTLAIEATPDWLSTLPDLKKVDQAIFVSANAV 68
Query: 61 S-------TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + AIG+ A ++ + ++ +L
Sbjct: 69 EQCFTQLQQAGFRWPATIRVIAIGQGCAAALKKFNIPIHAMP--EIADSEHLLTLSSLLQ 126
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAIL 171
++ ++ G E+ L+ + L ++ Y +K++ ++ D IL
Sbjct: 127 PQKQNILIFKGAGGRALIEETLLNKGVNLLALNVYQRVMPKINHQFVKSIWRDDLVDIIL 186
Query: 172 FYARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ S+ + F L L +S +A + + + ++
Sbjct: 187 LTSEQSMHHLFKLFEKDAHHWLRQKTCLVISERLAQIASSLGMSTII---RSHPDGMMNA 243
Query: 228 L 228
L
Sbjct: 244 L 244
>gi|254525860|ref|ZP_05137912.1| uroporphyrinogen-III synthase [Prochlorococcus marinus str. MIT
9202]
gi|221537284|gb|EEE39737.1| uroporphyrinogen-III synthase [Prochlorococcus marinus str. MIT
9202]
Length = 265
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/248 (10%), Positives = 62/248 (25%), Gaps = 22/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I+ITR + L ++ G +P + L + I +SS
Sbjct: 12 NIIITRSKEGILDIKKIFISKGANVFDLPAISIADPDDLNPLDEALNQINDFHWIIFSSS 71
Query: 58 ESL-------STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ ++ + I ++ I +A+ ++
Sbjct: 72 NGIKFVDKRLRYFNSSLKECSKKIKIAVVGEKTSKTLDDFGIKADFIPPEFVAESLINNF 131
Query: 111 VLFTPQKPLIYLGGKPRNFH-FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + + D + + + Y ++ +++ N
Sbjct: 132 PVSGYGLRVFVPRVQTGGRDLIADQFRKAGSRVFEVAAYETRCPESIPEETIDIISNRKV 191
Query: 170 --ILFYARSSVLYFFSLPLP--------AKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
I+F + +V+ L L + + V + A
Sbjct: 192 DAIIFSSGKTVVNAAFLLEKKLGKQWLEYFDQIKLLTIGPQTTKICNKIFGRVDSQAQKY 251
Query: 220 KETSLLKL 227
LL
Sbjct: 252 TFDGLLDA 259
>gi|113868874|ref|YP_727363.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Ralstonia eutropha H16]
gi|113527650|emb|CAJ93995.1| two domain protein: Uroporphyrinogen-III synthase/methylase
[Ralstonia eutropha H16]
Length = 707
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 68/275 (24%), Gaps = 51/275 (18%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSE 58
+V+TRP ++ + E +Q G + PL + LA ++ + S
Sbjct: 6 VVVTRPAGQSRQLTEALQAAGLDVLSFPLLGIGPAVDDAPLRAALARLNTFALVVFVSPN 65
Query: 59 --------------------------------SLSTLPANFCRHTPIFAIGEASACLARQ 86
S++ L I A A Q
Sbjct: 66 AIAYALDALAGVQGVAVAQWPAQVPVAVVGPASVAALAERGIAPPACRVIAPAGAAANGQ 125
Query: 87 KGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVID 146
+ + + + KP++ + G D L E + ++
Sbjct: 126 GPDDAAPEAEALRFDSEALWAQLDPAALAGKPVLIIRGNGGRDWLGDRLREAGAQVEAVE 185
Query: 147 CYYSQDIAYPETTMKNLLQN------ADAILFYARSSVLYFFSLPLPAK--------ISA 192
Y + + N A L + +V +L
Sbjct: 186 AYQRTLPEPSAMQWQAVRDNLRPGAAPHAWLLTSSEAVRNLDALARQHLSPEEDAALRQV 245
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ IA A + A P + LL
Sbjct: 246 QCIAPHARIAEQALALGFPHILRAA-PGDAGLLAA 279
>gi|301761494|ref|XP_002916164.1| PREDICTED: uroporphyrinogen-III synthase-like [Ailuropoda
melanoleuca]
gi|281354519|gb|EFB30103.1| hypothetical protein PANDA_004218 [Ailuropoda melanoleuca]
Length = 264
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 81/257 (31%), Gaps = 27/257 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M +++ + + ++ G+ ++P+ F F L+ + YG +
Sbjct: 1 MKVLLLKDAKEDDCGQDPYIRELGLYGFEATLIPVLSFEFLSLPSFSEKLSHPEGYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKD-------------NSI 100
TS ++ + + + A + K + + N
Sbjct: 61 FTSPRAVEAVELCLEKDSKTEAWKHSLREKWNAKSVYVVGNATASLVNKIGLDTEGANCG 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
N K+ +P PL++ G + L + IP+ I Y + ++
Sbjct: 121 NAEKLAEYICSRQSPALPLLFPCGTVKGEILPKMLKDRGIPMESITVYQKIPHPGIQVSL 180
Query: 161 KNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S S+ + L F + + A A+ A V
Sbjct: 181 NSYYSKQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPSTARALTAQGLPVS 240
Query: 214 TVACFPKETSLLKLLPL 230
+A P +L K L L
Sbjct: 241 CMAESPTPLALAKGLQL 257
>gi|254519529|ref|ZP_05131585.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium sp.
7_2_43FAA]
gi|226913278|gb|EEH98479.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium sp.
7_2_43FAA]
Length = 495
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 24/236 (10%), Positives = 78/236 (33%), Gaps = 17/236 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR ++A ++K++ +G + +E++ +Y I +TS
Sbjct: 251 NICVTRSREQASNLKKKLRNLGAEVTEINSIKIQETKENLNSVKDKLSNYDHIILTSVNG 310
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ + +G+A+ ++G G++ + +
Sbjct: 311 VNMFFDYIIENKIDIRSLKAKFSVVGKATRKALEERGIQAFIMGREF--VGEGLFKALEQ 368
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ ++ + ++ + + + + + Y + + + D IL
Sbjct: 369 HLVKGENVLIPCSSSSREYLKEEVEKLGLYVDRVHTYDTVCGDIRNKRV---FEEVDFIL 425
Query: 172 FYARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + S+V ++ +I + + + + A+ ++ E +
Sbjct: 426 YTSPSTVNNMINMFSIEEIKSKYNIAIGPQTYKALKSNTIEGHMC-KKHSEDGFID 480
>gi|148227936|ref|NP_001087355.1| uroporphyrinogen III synthase [Xenopus laevis]
gi|51593219|gb|AAH78608.1| MGC85561 protein [Xenopus laevis]
Length = 262
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 82/254 (32%), Gaps = 32/254 (12%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS---YGAIA 53
M +++ + P K + +++ G ++P+ F F Y +
Sbjct: 1 MKVLLLKDPKTKDLASDPYVKELSSHGLQATLIPVLSFKFVSLDHFFDKLSHPESYAGLI 60
Query: 54 ITSSESLSTLPANF----------------CRHTPIFAIGEASACLARQKGFTQIFHGKD 97
TS ++ + P++ +G+A+A L + G + G
Sbjct: 61 FTSPRAVEAVKLCLQKPAHKEAWKDHLCAKWNSKPVYVVGKATASLVEEIGLSSEGEGSG 120
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
N+ LA+ I + P+++ G + L E +PL I Y + +
Sbjct: 121 NAEKLAECIC--SKGLSYSAPILFPCGSLKKEVLPKKLQEKNVPLETITVYQTGPHPAIQ 178
Query: 158 TTMKNLLQNADAI---LFYARSSVL----YFFSLPLPAKISAAFLCLSNNIASAIPASYK 210
++ + +F++ S + + LP F + A A+
Sbjct: 179 VSLSDYFTKEGVPASIVFFSPSGLKYCLLFLKDLPSDQLNQIKFAAIGPTTAEAMAEEGI 238
Query: 211 NVVTVACFPKETSL 224
V A P L
Sbjct: 239 PVSCTAQNPTPQDL 252
>gi|304317046|ref|YP_003852191.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778548|gb|ADL69107.1| uroporphyrin-III C-methyltransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 496
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 70/240 (29%), Gaps = 19/240 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSES 59
+++TR A+ T + ++ G V+ P I + ++V + + Y I TS
Sbjct: 254 RVLLTRTYDLAMSTVDDLKDNGADVVICPTIKVIPEVDNVSKLIDNIEKYDYIIFTSVNG 313
Query: 60 LSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ I AIG + + + + + K
Sbjct: 314 VNVFKKTINLKKFDLRKLNGVKIAAIGSKTCEALNKIYIYPEVVPDEYTSIA----LAGK 369
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM-KNLLQNADA 169
+ + + + ++ L I Y + + + + + D
Sbjct: 370 LKSYAKGKSVAILTSDIGGDMLIDNLKDIAFLDKIVAYKNTPNYEIKDKLTNEIKKGIDI 429
Query: 170 ILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+F + S+ Y + + + +I S V + L+K
Sbjct: 430 AIFTSTSTFKYMSLILGDDISFLKNVKIAAIGPVTKESIERSGFKVDIMPSVYTMEELVK 489
>gi|260654412|ref|ZP_05859902.1| porphyrin biosynthesis protein HemD [Jonquetella anthropi E3_33 E1]
gi|260631045|gb|EEX49239.1| porphyrin biosynthesis protein HemD [Jonquetella anthropi E3_33 E1]
Length = 493
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 66/238 (27%), Gaps = 25/238 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESL 60
+V+TR A R + + G ++ P D S L+ + + TS+ +
Sbjct: 253 VVVTRGASDAPRFAGTLARWGARVLVRPSIDPRADFSSPALSDFRPGQHEWLVFTSAHGV 312
Query: 61 STLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIVEQK 110
+ I A+G A+A +G +S +LA+ + +K
Sbjct: 313 EFFFQWLAQKGWDVRAFAGAKIAAVGPATARELEARGLIVDLVPDVFDSAHLAEALAARK 372
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ L Y ++ ++ +
Sbjct: 373 TSSAA-----AFRAWEATDVLSREMARSGCRLDEYPLYRNEMDGGEVGSLSADW-----V 422
Query: 171 LFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F + S+V F A LC+ A V A S+ L
Sbjct: 423 TFASPSAVRGFVRRWKAPG--ARALCIGPTTAEEAQKLGFQTV-TARQATFESMTAAL 477
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/121 (12%), Positives = 28/121 (23%), Gaps = 6/121 (4%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ G F L + V + + ++F +
Sbjct: 252 TVVVTRGASDAPRFAGTLARWGARVLVRPSIDPRADFSSPALSDFRPGQHEWLVFTSAHG 311
Query: 178 VLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
V +FF + A + A V V L + L R
Sbjct: 312 VEFFFQWLAQKGWDVRAFAGAKIAAVGPATARELEARGLIVDLVPDVFDSAHLAEALAAR 371
Query: 232 R 232
+
Sbjct: 372 K 372
>gi|284038107|ref|YP_003388037.1| uroporphyrinogen III synthase HEM4 [Spirosoma linguale DSM 74]
gi|283817400|gb|ADB39238.1| Uroporphyrinogen III synthase HEM4 [Spirosoma linguale DSM 74]
Length = 261
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 68/242 (28%), Gaps = 19/242 (7%)
Query: 2 YIVIT--RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITS 56
+++T RP + + + K P + F ++ AI TS
Sbjct: 18 RLLVTQSRPADEKSPYFDLVSKYNLQIDFRPFIQIQGESFKDFRRQKINILAHTAIIFTS 77
Query: 57 SESLSTLPANFCR-------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F I E +A ++ + + + ++
Sbjct: 78 RNAIDHFFRICQEGRIEVPADMKYFCISEQTANYLQKYIVIRKRKIFNGTKTATELFDLI 137
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
K + ++ R +++ + Y + + ++ + D
Sbjct: 138 KKH--KNEKFLFPCSNIRRNDIPEFMDTSGLHFTEAVMYDTVPTDLSDLDIE----SYDI 191
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
I F++ S V S + A AI + + A P S+ L
Sbjct: 192 IAFFSPSGVSSLMSNFPNFNQNGTRLAAFGPTTAKAIVEAGLTLDIEAPLPNAPSMTGAL 251
Query: 229 PL 230
L
Sbjct: 252 DL 253
>gi|52081297|ref|YP_080088.1| uroporphyrinogen III cosynthase [Bacillus licheniformis ATCC 14580]
gi|52786676|ref|YP_092505.1| hypothetical protein BLi02944 [Bacillus licheniformis ATCC 14580]
gi|319647210|ref|ZP_08001432.1| HemD protein [Bacillus sp. BT1B_CT2]
gi|52004508|gb|AAU24450.1| uroporphyrinogen III cosynthase [Bacillus licheniformis ATCC 14580]
gi|52349178|gb|AAU41812.1| HemD [Bacillus licheniformis ATCC 14580]
gi|317390557|gb|EFV71362.1| HemD protein [Bacillus sp. BT1B_CT2]
Length = 263
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 72/248 (29%), Gaps = 20/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
+++TR +A +EK++ +G V+ L F F A +S + TS
Sbjct: 11 KVLVTRNKAQAQSFREKVEALGGEAVLTSLISFRPALPPEQARRFRADLESADWLVFTSV 70
Query: 58 ESLSTLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + AR + + +A+ + E
Sbjct: 71 NGAKFFFSYLKDAGLCDPPASKAKVAAVGEKTARYLRDRGLSVDLMPELYVAEHLAEALK 130
Query: 112 LF-TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
++ L G + + I + Y + +K ++ D
Sbjct: 131 QNAGRHDKVVVLKGNLSRDVIKKTISPLGIQVSEWILYETVRDERGILDLKEAAKHASFD 190
Query: 169 AILFYARSSVLYFFSLPLPAKI------SAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ F + S+V F S+ + AF+ + A+ +
Sbjct: 191 FVTFTSSSTVHTFMSILKEESLAWAEKNRTAFITIGPLTKKALSDYGIPS-YMPDVYTID 249
Query: 223 SLLKLLPL 230
+L+ +
Sbjct: 250 GMLREMCR 257
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 8/121 (6%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIP--LRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
K ++ K + F + + L + + + L++AD ++F +
Sbjct: 10 KKVLVTRNKAQAQSFREKVEALGGEAVLTSLISFRPALPPEQARRFRADLESADWLVFTS 69
Query: 175 RSSVLYFFSLPLPAKI------SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +FFS A + A + A + +V + L + L
Sbjct: 70 VNGAKFFFSYLKDAGLCDPPASKAKVAAVGEKTARYLRDRGLSVDLMPELYVAEHLAEAL 129
Query: 229 P 229
Sbjct: 130 K 130
>gi|90023306|ref|YP_529133.1| Na+/H+ antiporter NhaA [Saccharophagus degradans 2-40]
gi|89952906|gb|ABD82921.1| Uroporphyrinogen III synthase HEM4 [Saccharophagus degradans 2-40]
Length = 290
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 74/270 (27%), Gaps = 42/270 (15%)
Query: 2 YIVITRPIKKALRTQEKIQ----KMGYIPVMMPLSYFIHDRESVFLAMQQ-------SYG 50
I+ +RP+ + ++I+ + + + +PL I Q Y
Sbjct: 9 RIIASRPVAQNSEWCKRIEMFNSEAVWRALPIPLLEIIPVTGEAEKRQLQTQALGLDDYQ 68
Query: 51 AIAITSSESLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKD------ 97
I S ++ + P +GE + Q+ G
Sbjct: 69 KILFVSQNAVEHFFTCLEDYWPQLPKQLCFIGVGEKTKQAILQQLDRWGCAGDQIVLGGV 128
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+++N ++ ++ + ++ G + L+ + + Y
Sbjct: 129 DAMNSEALLAMPELQQVDAEKILICRGVGGRPMLGEILVARGARIEYCELYQRALPKQAV 188
Query: 158 TTMKNLLQN--ADAILFYARSSVLYFFSLPLPA----------------KISAAFLCLSN 199
+ N D ++ ++ ++ + +
Sbjct: 189 AVLAEADLNSTTDICPVFSGETLTNLVAVLAKHSNPRASEKPPFRLPAQWRALIVVVPGE 248
Query: 200 NIASAIPASYKNVVTVACFPKETSLLKLLP 229
+A A + VA E ++LK +
Sbjct: 249 RVAQHAKAVGFKRIAVAKNATEPAMLKAIQ 278
>gi|47093091|ref|ZP_00230868.1| uroporphyrinogen-III synthase [Listeria monocytogenes str. 4b
H7858]
gi|226224156|ref|YP_002758263.1| uroporphyrinogen III cosynthase (HemD) [Listeria monocytogenes
Clip81459]
gi|254852179|ref|ZP_05241527.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL R2-503]
gi|254931495|ref|ZP_05264854.1| uroporphyrinogen-III synthase [Listeria monocytogenes HPB2262]
gi|300764779|ref|ZP_07074769.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL N1-017]
gi|47018531|gb|EAL09287.1| uroporphyrinogen-III synthase [Listeria monocytogenes str. 4b
H7858]
gi|225876618|emb|CAS05327.1| Putative uroporphyrinogen III cosynthase (HemD) [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258605483|gb|EEW18091.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL R2-503]
gi|293583047|gb|EFF95079.1| uroporphyrinogen-III synthase [Listeria monocytogenes HPB2262]
gi|300514455|gb|EFK41512.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL N1-017]
gi|328465590|gb|EGF36819.1| uroporphyrinogen-III synthase [Listeria monocytogenes 1816]
gi|328474911|gb|EGF45711.1| uroporphyrinogen-III synthase [Listeria monocytogenes 220]
Length = 240
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/232 (14%), Positives = 65/232 (28%), Gaps = 6/232 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + G+ +PL + + QQ + +TS+ ++
Sbjct: 4 KVVLTREANKNKPWQTYFSQNGFEVTSIPLIKTRPIKMDLS-REQQQTDWLFLTSANAVE 62
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
N + F + + + E + ++
Sbjct: 63 YFFTNQHERFNYKIAVIGEKTKEKLAEFGHEPNFVPSIYQSEVFLEEWLNENPEKTSILI 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
+D LIE + + Y + + + L I+F + S+
Sbjct: 123 PQSNLSRTIIKDRLIEKGYIVVSFELYETIFPENSKIRLIEQLKLNETQIIVFASPSAWK 182
Query: 180 YFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S K + + AI A V L L+
Sbjct: 183 NFYSTAKSFPAQKEKWHIASIGSITTEAIIADGWEVKYQPKTFTMKHLADLI 234
>gi|296278592|pdb|3MW8|A Chain A, Crystal Structure Of An Uroporphyrinogen-Iii Synthase
(Sama_ Shewanella Amazonensis Sb2b At 1.65 A Resolution
Length = 240
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 62/236 (26%), Gaps = 9/236 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESL 60
+++TRP K + + ++ PL + L + S+ ++
Sbjct: 3 KLLLTRPEGKNAAXASALDALAIPYLVEPLLSVEAAAVTQAQLDELSRADILIFISTSAV 62
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIF--HGKDNSINLAKIIVEQKVLFTPQKP 118
S P A I +S ++ + K
Sbjct: 63 SFATPWLKDQWPKATYYAVGDATADALALQGITAERSPADSQATEGLLTLPSLEQVSGKQ 122
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
++ + GK D L + ++ Y + Q+ I+ +
Sbjct: 123 IVIVRGKGGREAXADGLRLRGANVSYLEVYQRACPPLDAPASVSRWQSFGIDTIVVTSGE 182
Query: 177 SVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +L + S + + VT A + ++L L
Sbjct: 183 VLENLINLVPKDSFAWLRDCHIIVPSARVETQARKKGLRRVTNAGAANQAAVLDAL 238
>gi|321312346|ref|YP_004204633.1| uroporphyrinogen-III synthase [Bacillus subtilis BSn5]
gi|320018620|gb|ADV93606.1| uroporphyrinogen-III synthase [Bacillus subtilis BSn5]
Length = 262
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 73/242 (30%), Gaps = 17/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYF-IHDRESVFLA---MQQSYGAIAITSSE 58
+++TR +A Q+K++ +G V+ L F V + G + TS
Sbjct: 12 VLVTRNKAQATSFQQKVEALGGKAVLTSLITFRRALPNDVAEQVREDLTAPGWLVFTSVN 71
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ-----KVLF 113
+ + I + A + + H + + I EQ K
Sbjct: 72 GADFFFSYLKENQLILPAHKKIAAVGEKTARRLKTHNVSVDVMPQEYIAEQLAAALKQHA 131
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAIL 171
P +P+ + G + L+ ++ Y + +K+ + D +
Sbjct: 132 EPGEPITVMKGNLSRDVIKQELVPLGFEVKEWVLYETIPDEEGIEALKDAAGQYSFDYVT 191
Query: 172 FYARSSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + S+V F + + + A+ +L+
Sbjct: 192 FTSSSTVHTFMHVLGEELKKWKANGTACISIGPLTNDALLTYGITSH-TPDTFTIDGMLE 250
Query: 227 LL 228
L+
Sbjct: 251 LM 252
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 6/123 (4%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIP--LRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
K ++ K + F+ + L + + ++ L ++F
Sbjct: 8 KGKTVLVTRNKAQATSFQQKVEALGGKAVLTSLITFRRALPNDVAEQVREDLTAPGWLVF 67
Query: 173 YARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +FFS ++ + A + +V + L L
Sbjct: 68 TSVNGADFFFSYLKENQLILPAHKKIAAVGEKTARRLKTHNVSVDVMPQEYIAEQLAAAL 127
Query: 229 PLR 231
Sbjct: 128 KQH 130
>gi|225025796|ref|ZP_03714988.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353]
gi|224956880|gb|EEG38089.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353]
Length = 844
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 70/237 (29%), Gaps = 15/237 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSSES 59
+++T R +++ G + L V L Y I TS+
Sbjct: 598 VLVTGTTSMVDRLSPILKEEGAEAISFSLIRTERMKLPELDVALKEIDKYNWIVFTSANG 657
Query: 60 LSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ H IG+ + + G F S +
Sbjct: 658 VECFFEEMQEIRKDIRDLAHVRFAVIGDGTKKALEEHGIFCDFIPTAYSS--KDMAEAMV 715
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ ++ L + N D L E I I Y++ + L++ AD +
Sbjct: 716 PHIGKDESVLLLRAEEANRVLPDALEEAGISHTCISLYHTVTDERKADELNRLIKMADYV 775
Query: 171 LFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + S+V F S+ ++ ++ + + ++ A +++
Sbjct: 776 TFASSSAVRAFVSMVDNLDEVKGKYISIGPVTTKTAQENGLSIAKTAVVYTARGMVE 832
>gi|16800658|ref|NP_470926.1| uroporphyrinogen-III synthase [Listeria innocua Clip11262]
gi|16414077|emb|CAC96821.1| lin1590 [Listeria innocua Clip11262]
Length = 240
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 78/234 (33%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
IV+TR K Q+ + G+ +PL + S+ L + + +TS+ ++
Sbjct: 4 KIVLTREASKNKPWQDYFSQNGFDVESIPLIETDPKKISLSLNQ-KEADWLFLTSANAVE 62
Query: 62 TLPANFCR--HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ I IGE + + G+ F + + E T Q +
Sbjct: 63 YFFNEQAGKLNYKIAVIGEKTKEKLAEYGYKPNFVPSVYQSEV--FLSEWLSENTSQTSI 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSS 177
+ ED L ++ + I+ Y + +T + LQ I+F + S+
Sbjct: 121 LLPQSNLSRTIIEDTLTQNGHLVFPIELYETSFPENSQTILIEQLQLDEKRIIIFASPSA 180
Query: 178 VLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+++ + + N AI A V L L+
Sbjct: 181 WKNFYTIAKQFSIKNENWRIASIGNITTEAILADGWEVTYQPKTFTMKHLADLI 234
>gi|294679025|ref|YP_003579640.1| uroporphyrinogen-III synthase [Rhodobacter capsulatus SB 1003]
gi|294477845|gb|ADE87233.1| uroporphyrinogen-III synthase [Rhodobacter capsulatus SB 1003]
Length = 232
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 79/233 (33%), Gaps = 14/233 (6%)
Query: 3 IVITRPIKKALRTQEKIQKM-GYI--PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++TRP + R + + G V+ PL + A A+ TS ++
Sbjct: 9 LLLTRPRAGSERFAAQFRARMGADWPVVIAPLLETAPTGADLPAAN-----ALIFTSEQA 63
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ L + P F +GE +A + R+ GF A+ + E + P+
Sbjct: 64 VKPLAESALSGRPAFCVGERTAAVVRRAGF-----PVLAVAPDAEHLFEVILSAADPGPI 118
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSV 178
++ G F + L + Y + Q ++ ++ +S
Sbjct: 119 LHARGSESAFPLAERLGAAGRQVGEAIVYAQLPQPPAPEMLSLFAQPGPVLVPIFSPNSG 178
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
A+ + +S A A A ++ +A P +LL L R
Sbjct: 179 RLLAEAAQGARAELRLVAISEKAARACAALPATLLQIAARPDAEALLDALVAR 231
>gi|315104837|gb|EFT76813.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL050PA2]
Length = 241
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 67/231 (29%), Gaps = 10/231 (4%)
Query: 3 IVITRPIKKA-LRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAITSSES 59
+V+ P + + +++ GY + L+ + ++ L + +TS +
Sbjct: 13 VVV--PRDDSHDKFVTTLKQAGYGVIHTALTRTVTLPDAEGLTTPDLWHADWLVVTSKTT 70
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ LP A + A + + D+ A ++ E +
Sbjct: 71 VGLLPTPLPNPNIKVAAVGVATSAALRTRGIDVDFVPDDHSG-AGLVAEWP---GGTASI 126
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + L + + ++ Y + + + + + A S
Sbjct: 127 LLPTSQLAADTVPLGLTKIGCTVNRLEVYTTAAVEKLPEVIAQSWPSVGVGVVTASSVGR 186
Query: 180 YFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L P + L A + VA P ++L+ +
Sbjct: 187 ALVELVEPLGWRHQKLVALGKPTARTLEELGHPAHAVASSPTPEAILEAVE 237
>gi|332311997|gb|EGJ25092.1| Uroporphyrinogen-III synthase [Listeria monocytogenes str. Scott A]
Length = 240
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/232 (14%), Positives = 66/232 (28%), Gaps = 6/232 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + G+ +PL + + QQ + +TS+ ++
Sbjct: 4 KVVLTREANKNKPWQTYFSQNGFEVTSIPLIKTRPIKMDLS-REQQQTDWLFLTSANAVE 62
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
N + F + + + E + + ++
Sbjct: 63 YFFTNQHERFNYKIAVIGEKTKEKLAEFGHEPNFVPSIYQSEVFLEEWLNENSEKTSILI 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
+D LIE + + Y + + + L I+F + S+
Sbjct: 123 PQSNLSRTIIKDRLIEKGYIVVSFELYETIFPENSKIRLIEQLKLNETQIIVFASPSAWK 182
Query: 180 YFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S K + + AI A V L L+
Sbjct: 183 NFYSTAKSFPAQKEKWHIASIGSITTEAIIADGWEVKYQPKTFTMKHLADLI 234
>gi|298292773|ref|YP_003694712.1| uroporphyrinogen III synthase HEM4 [Starkeya novella DSM 506]
gi|296929284|gb|ADH90093.1| Uroporphyrinogen III synthase HEM4 [Starkeya novella DSM 506]
Length = 234
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 79/237 (33%), Gaps = 10/237 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A T E+++ G+ ++ PL + + + A+A+TS
Sbjct: 1 MRVLVTRPRPDAEATAERLRAAGHEAILDPLLSVEAIPD--ARLPEGPFDAVALTSVNGA 58
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
L A A + + A ++ + ++
Sbjct: 59 RALAAREELARLTGLPLYAVGKRTAAAAPSGFSPVHVAGGDGAALVELLREKLPRGARVL 118
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILFYARSSV 178
++ G+ R L I + Y + A + DA ++ +
Sbjct: 119 HVAGEERAVELSRELAPAGIAAELFVIYRAVPAATLSPATLDAAQARRIDAAFHFSPRTA 178
Query: 179 LYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+L A +A F LC S N+A+ + A+ +A P E L LL
Sbjct: 179 ATLAALAQAAGAAAHFRHITHLCFSANVAAPLAAAGW-PTRIAAEPTEDGLFALLGR 234
>gi|255521283|ref|ZP_05388520.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL J1-175]
Length = 240
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/232 (14%), Positives = 66/232 (28%), Gaps = 6/232 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + G+ + +PL + + QQ + +TS+ ++
Sbjct: 4 KVVLTREANKNKPWQTYFSQNGFEVMSIPLIKTRPIKMDLS-REQQQTDWLFLTSANAVE 62
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
N + F + + + E + ++
Sbjct: 63 YFFTNQHERFNYKIAVIGEKTKEKLAEFGHEPNFVPSIYQSEVFLEEWLNENPEKTSILI 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
+D LIE + + Y + + + L I+F + S+
Sbjct: 123 PQSNLSRTIIKDRLIEKGYIVVSFELYETIFPENSKIRLIEQLKLNETQIIVFASPSAWK 182
Query: 180 YFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S K + + AI A V L L+
Sbjct: 183 NFYSTAKSFPAQKEKWHIASIGSITTEAIIADGWEVKYQPKTFTMKHLADLI 234
>gi|224499786|ref|ZP_03668135.1| uroporphyrinogen-III synthase [Listeria monocytogenes Finland 1988]
Length = 227
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 67/225 (29%), Gaps = 6/225 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + GY + +PL + ++ QQ + +TS+ ++
Sbjct: 4 KVVLTREASKNKPWQTYFSQNGYEVMSIPLIKTQPIKINLS-REQQETDWLFLTSANAVE 62
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
N + + F + + E + ++
Sbjct: 63 YFFTNQYERSNYKIAVIGEKTKEKLAEFGHEPSFVPSIYQSEVFLEEWLNENPEKTSILL 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
+D LIE + I+ Y + + + L I+F + S+
Sbjct: 123 PQSNLSRTIIKDTLIEKGYIVFSIELYETIFPEASKKLLTEQLKLNETQIIVFASPSAWK 182
Query: 180 YFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
F+S+ K + + AI A V P
Sbjct: 183 NFYSIAKSFPAQKEKWHIASIGSITTEAILADGWEVKISTKKPSP 227
Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 35/110 (31%), Gaps = 4/110 (3%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K ++ +N ++ Y ++ + I +Q I + Q D + + +
Sbjct: 3 KKVVLTREASKNKPWQTYFSQNGYEVMSIPLIKTQPIKIN---LSREQQETDWLFLTSAN 59
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+V YFF+ + + + + V + L+
Sbjct: 60 AVEYFFTN-QYERSNYKIAVIGEKTKEKLAEFGHEPSFVPSIYQSEVFLE 108
>gi|154686950|ref|YP_001422111.1| hypothetical protein RBAM_025200 [Bacillus amyloliquefaciens FZB42]
gi|154352801|gb|ABS74880.1| HemD [Bacillus amyloliquefaciens FZB42]
Length = 259
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 82/245 (33%), Gaps = 23/245 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYF-IHDRESVFLAM---QQSYGAIAITSSE 58
+++TR ++A ++K++ +G V L F + ++ G + TS
Sbjct: 12 VLVTRNKRQAAPFRKKVEALGGTAVSASLIAFQEALPDECADSLREDLSEPGWLVFTSVN 71
Query: 59 SLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + RH I A+GE +A +++G +A+ + +
Sbjct: 72 GVRFFFSYLDRHGLALSGRKKIAAVGEKTARALKERGARTDAMPD---EYVAECLADTLK 128
Query: 112 L-FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK--NLLQNAD 168
+ +P+ + G + L +R Y + ++ + D
Sbjct: 129 RYASAAEPISVIKGNLSRDVIKAELEPLGYQIREWVLYNTIQDEKGMDELRRAASRSHFD 188
Query: 169 AILFYARSSVLYFFSLPLPAKISA-----AFLCLSNNIASAIPASYKNVVTVACFPKETS 223
I F + S+V F + + +++ + A+ + V
Sbjct: 189 FITFTSSSAVHTFMHAVGDGEKAWENSGASYISIGPLTEKALLEYGISSH-VPDTYTIEG 247
Query: 224 LLKLL 228
+L ++
Sbjct: 248 MLDVM 252
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 24/89 (26%), Gaps = 4/89 (4%)
Query: 146 DCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA----AFLCLSNNI 201
+ +++ L ++F + + V +FFS ++ +
Sbjct: 41 IAFQEALPDECADSLREDLSEPGWLVFTSVNGVRFFFSYLDRHGLALSGRKKIAAVGEKT 100
Query: 202 ASAIPASYKNVVTVACFPKETSLLKLLPL 230
A A+ + L L
Sbjct: 101 ARALKERGARTDAMPDEYVAECLADTLKR 129
>gi|150398164|ref|YP_001328631.1| uroporphyrinogen-III synthase [Sinorhizobium medicae WSM419]
gi|150029679|gb|ABR61796.1| Uroporphyrinogen III synthase HEM4 [Sinorhizobium medicae WSM419]
Length = 238
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 11/238 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A T K+ MG+ ++P+ H ++V A+ + AIAITS+E++
Sbjct: 1 MRVLVTRPRPSAESTAAKLGAMGHETAILPMLQAQHLADAVLTALSVPHQAIAITSAEAV 60
Query: 61 STLPANFCRHTPIFAI--GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
L + P F AR G + +
Sbjct: 61 RVLGSLGPALEPHFGTPLFSVGGATARAAGGLGFTDIRTGPGTGEGLAETVAAHLPAGGA 120
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYARS 176
L+YL G PR FE L E ++ R +CY + Y T+ DA+L Y+R
Sbjct: 121 LVYLAGSPRTGGFERSLHERRVDYRTAECYRMAPVHYSADTLPELVRAGPFDAVLLYSRE 180
Query: 177 SVLYFF-----SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ S PA++++ LCLS I +PA + V VA P E +L +LL
Sbjct: 181 TARRLIATLRESRLQPAELASRCLCLSWPIREILPAGF--VSEVAAAPDEENLFRLLE 236
>gi|330812534|ref|YP_004356996.1| bifunctional protein: uroporphyrinogen-III synthase (hemD) and
polytopic membrane protein hemX [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327380642|gb|AEA71992.1| putative bifunctional protein: uroporphyrinogen-III synthase (hemD)
and polytopic membrane protein hemX [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 638
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 66/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITS- 56
+++TRP ++ + + G +PL S Y A+ + S
Sbjct: 5 RLLLTRPADESSALAAVLAEAGVYSSSLPLLDIEPVPLSDAGRAIFQALDQYSAVIVVSK 64
Query: 57 --SESLSTLPANFCRHTPIFAIGEASACLAR----QKGFTQIFHGKDNSINLAKIIVEQK 110
+ L + P A + D+S L + +V ++
Sbjct: 65 PAARLCVELLHQYWPQPPDQPWFSVGAATGQILVDAGLTVFYPDNGDDSEALLEHLVLRQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNAD 168
+ ++ + G+ + L E + ++ Y Y E + + +
Sbjct: 125 AVARSDPKVLIVRGEGGRGLLAERLREQGASVDYLELYRRHLPDYGEGALPAKVEAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVT 214
A++ + + L A S +A A+ V
Sbjct: 185 ALVVSSGQGFEHLQRLAGDAWPALARLPLFVPSPRVAEMARAAGARTVV 233
>gi|282853360|ref|ZP_06262697.1| uroporphyrinogen-III synthase [Propionibacterium acnes J139]
gi|282582813|gb|EFB88193.1| uroporphyrinogen-III synthase [Propionibacterium acnes J139]
gi|313814513|gb|EFS52227.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL025PA1]
gi|314922346|gb|EFS86177.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL001PA1]
gi|314965337|gb|EFT09436.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL082PA2]
gi|314982569|gb|EFT26661.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL110PA3]
gi|315091094|gb|EFT63070.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL110PA4]
gi|315094181|gb|EFT66157.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL060PA1]
gi|327329282|gb|EGE71042.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL103PA1]
Length = 241
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 67/231 (29%), Gaps = 10/231 (4%)
Query: 3 IVITRPIKKA-LRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAITSSES 59
+V+ P + + +++ GY + L+ + ++ L + +TS +
Sbjct: 13 VVV--PRDDSHDKFVTTLKQAGYGVIHTALTRTVTLPDAEGLTTPDLWHADWLVVTSKTT 70
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ LP A + A + + D+ A ++ E +
Sbjct: 71 VGLLPTPLPNPNIKVAAVGVATSAALRTRGIDVDFVPDDHSG-AGLVAEWP---GGTASI 126
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + L + + ++ Y + + + + + A S
Sbjct: 127 LLPTSQLAADTVPLGLTKIGCTVNRLEVYTTAAVEKLPEVIAQSWPSVGVGVVTASSVGR 186
Query: 180 YFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L P + L A + VA P ++L+ +
Sbjct: 187 ALVELVEPLGWRHQKLVALGKPTARTLEELGHPAHAVASSPTPEAVLEAVE 237
>gi|118602826|ref|YP_904041.1| uroporphyrinogen III synthase HEM4 [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567765|gb|ABL02570.1| Uroporphyrinogen III synthase HEM4 [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 248
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/239 (15%), Positives = 78/239 (32%), Gaps = 15/239 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP+ + Q + K G P++ P V Y I S ++
Sbjct: 1 MNVLLTRPLLQVEELQSMVTKSGNKPLLFPTLKLNSIDAKVE---NNYYDVIIFISVNAV 57
Query: 61 STLPANFCR--HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ IFA+G A+A + + + ++ V K
Sbjct: 58 EYGLKILKTISYHKIFAVGSATARKLSENDIEIDDFPRKKAS-SEALLALDSVAQLYHKT 116
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAILFYA 174
++ G+ + LI+ + ++ Y + ++L +N I +
Sbjct: 117 ILIFRGQSGREVLKQGLIKQNNQVEYVEVYERVNHNINSLHRQSLDELLSRNEGVISITS 176
Query: 175 RSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+ + + + LS+ I + + + N V V ++ +L
Sbjct: 177 IDSMKLLVKISSQILDVDRLKNYLLVVLSDRIKTYVNSIGFNKVLVTPNTSNNGIISVL 235
>gi|46907785|ref|YP_014174.1| uroporphyrinogen-III synthase [Listeria monocytogenes serotype 4b
str. F2365]
gi|254824386|ref|ZP_05229387.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL J1-194]
gi|254993452|ref|ZP_05275642.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL J2-064]
gi|46881054|gb|AAT04351.1| uroporphyrinogen-III synthase [Listeria monocytogenes serotype 4b
str. F2365]
gi|293593621|gb|EFG01382.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL J1-194]
Length = 240
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 64/232 (27%), Gaps = 6/232 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + G+ +PL + + QQ + +TS+ ++
Sbjct: 4 KVVLTREANKNKPWQTYFSQNGFEVTSIPLIKTRPIKMDLS-REQQQTDWLFLTSANAVE 62
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
+ F + + + E + ++
Sbjct: 63 YFFTIQHERFNYKIAVIGEKTKEKLAEFGHEPNFVPSIYQSEVFLEEWLNENPEKTSILI 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
+D LIE + + Y + + + L I+F + S+
Sbjct: 123 PQSNLSRTIIKDRLIEKGYIVVSFELYETIFPENSKIRLIEQLKLNETQIIVFASPSAWK 182
Query: 180 YFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S K + + AI A V L L+
Sbjct: 183 NFYSTAKSFPAQKEKWHIASIGSITTEAIIADGWEVKYQPKTFTMKHLADLI 234
>gi|116073901|ref|ZP_01471163.1| Uroporphyrinogen-III synthase [Synechococcus sp. RS9916]
gi|116069206|gb|EAU74958.1| Uroporphyrinogen-III synthase [Synechococcus sp. RS9916]
Length = 268
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 73/249 (29%), Gaps = 26/249 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+++TR ++ + +++++G + +P E L + + +S+
Sbjct: 9 VLVTRAQEQQGEGRRQLEQLGAQVIDLPALVIGPPDEWGPLDDALDELDEFHWLLFSSAN 68
Query: 59 SLSTLPANFCR----------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + R I A+G +A L Q G F D + +I
Sbjct: 69 GVRAVEERLQRLGQSLARRPGSLRIAAVGRKTAALLEQLGAPADFVPPDFVADS--LIEH 126
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
V + LI + E + + Y S+ + + L + +
Sbjct: 127 FPVSGWGLRLLIPRVQSGGRTVLAEAFGEAGARVVEVAAYESRCPDHIPEAAASALASGE 186
Query: 169 A--ILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
I F + +V + L S + + + V A
Sbjct: 187 VAAISFSSGKTVTHTAQLLEARFGPDWRQLLASTQIISIGPQTSQRCQEVMGRVDAEATP 246
Query: 219 PKETSLLKL 227
L++
Sbjct: 247 HDIAGLVQA 255
>gi|325846167|ref|ZP_08169236.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481646|gb|EGC84682.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 779
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 75/236 (31%), Gaps = 19/236 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS--YGAIAITSSES 59
I +TR + ++ +EK++ +G+ ++P + + + Y + TS +
Sbjct: 541 KIALTRDYESTIKDKEKLEGLGFDVKIVPTIKILEKNTDLLEEKFKDFSYDYLVFTSKNA 600
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + I AIGE + + ++ ++ + +
Sbjct: 601 VKIFFDKLIENHDIRDIGKVKIAAIGEKTKKEIEKYNLKVDIVPRNF--VGENLLDQMEK 658
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ + + + L + L I+ Y + + + + D ++
Sbjct: 659 YVKKGEKIFFPHSNLSRKKIIEGLGKMG-DLDEIEIYDNIRAEKEDIDL-----DFDGVI 712
Query: 172 FYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + S V F + + + + + I V + SL++
Sbjct: 713 FTSSSCVNNFVEIYGKDPLKNTKIYSIGQITSQTIKNHGLEVYKESKKQSVDSLIE 768
>gi|302388904|ref|YP_003824725.1| uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III
synthase [Thermosediminibacter oceani DSM 16646]
gi|302199532|gb|ADL07102.1| uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III
synthase [Thermosediminibacter oceani DSM 16646]
Length = 521
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 58/251 (23%), Gaps = 24/251 (9%)
Query: 2 YIVIT--------RPIKKALRTQEKIQKMGYIPVMMPLSYFI--HDRESVFLAMQQSYGA 51
I++T +P ++ G + P + + FLA
Sbjct: 255 RILVTGTIDAEKGQPEDGPFDF---LEDAGAEVIHCPTVKIEFDYGETAGFLANAGDLNL 311
Query: 52 IAITSSESLSTLPANFCRHTPIFAIGEASA-------CLARQKGFTQIFHGKDNSINLAK 104
+ TS +++ R + R +
Sbjct: 312 LVFTSKNAVTAFAGAMRRMRLDLRRLGGATVAAVGRKTAERLEEVFIYPDLVPEEFTSKD 371
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ + ++ + L + I Y + + L
Sbjct: 372 LLEKIPAGGGGKRTAAVITSDIGGQELVGGLEARGYRVMKIAAYKNLPNYDVRERLIEEL 431
Query: 165 QN-ADAILFYARSSVLYFFSLPLPAKISAA---FLCLSNNIASAIPASYKNVVTVACFPK 220
DA +F + SS + + A+AI + V
Sbjct: 432 GKGVDAAVFTSPSSFYRMEQMVGKLPEKLKKVFIAAIGPTTAAAIEKTGLKVDVCPKEHT 491
Query: 221 ETSLLKLLPLR 231
L K L +
Sbjct: 492 LEGLQKALLEK 502
>gi|157125710|ref|XP_001660743.1| uroporphyrinogen iii synthase [Aedes aegypti]
gi|108882596|gb|EAT46821.1| uroporphyrinogen iii synthase [Aedes aegypti]
Length = 253
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 78/244 (31%), Gaps = 18/244 (7%)
Query: 2 YIVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+VI + ++K G+ P+ +P F + + + Y I S ++
Sbjct: 8 KVVILKSESDNSEAYPALLRKHGFEPIFVPTLDFSFRLDILRDRLLSPYS-IRYHSPRAI 66
Query: 61 ST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ L ++ +S + R N+ NLA I
Sbjct: 67 TAVRDALDGNRLKDDWKPLENYSVGETSSELIQRTLELDTKGQHSGNASNLADFIKTDLY 126
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE----TTMKNLLQNA 167
T P ++ G + ++ L E+ L ++ Y + E + +
Sbjct: 127 NKTVTLPFLFPCGNLKQDVLQNKLSEYGYSLDCVEVYETVPHRDLERNLVELFREGAEQP 186
Query: 168 DAILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+LF++ S + Y S+ K+ + + + AI V A P +
Sbjct: 187 GYLLFFSPSGMNYCASVFERHKLDINGCRIVAIGPSTKKAIENKGYAVHRTAEKPSPEYV 246
Query: 225 LKLL 228
+ L
Sbjct: 247 VSAL 250
>gi|323136450|ref|ZP_08071532.1| Uroporphyrinogen III synthase HEM4 [Methylocystis sp. ATCC 49242]
gi|322398524|gb|EFY01044.1| Uroporphyrinogen III synthase HEM4 [Methylocystis sp. ATCC 49242]
Length = 232
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 48/235 (20%), Positives = 91/235 (38%), Gaps = 16/235 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R + A RT EK++ +G+ V+ P+ + ++ + A+ +S++ +
Sbjct: 3 RVLVLRAREDAARTSEKLRALGFESVLSPVLEIVATGAAI---PSGEFDAVLASSAKGVE 59
Query: 62 TLPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
P A+G +A A +G+ + L ++ +
Sbjct: 60 CAGNISALLRLPFHAVGAKTAKAAETRGWRPDIVAGNAEAILPLLLARYA----QPAHFL 115
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSV 178
YL G+ R E L + +D Y ++ + L + D L Y+R SV
Sbjct: 116 YLAGRDRQAALEAGLRAAGHRVTAVDVYAARAATALGEDARRALAAGDIDIALHYSRRSV 175
Query: 179 LYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F +L ++ L LS+++A+ + A VA P E LL LL
Sbjct: 176 EIFLALAEAVGLTPRLGGVTHLALSDDVATPLRAIALEP-RVAQKPNEERLLALL 229
>gi|162147853|ref|YP_001602314.1| uroporphyrinogen III synthase [Gluconacetobacter diazotrophicus PAl
5]
gi|161786430|emb|CAP56012.1| putative uroporphyrinogen III synthase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 222
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 77/222 (34%), Gaps = 10/222 (4%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFA 75
++++G+ MP ++V A+ +TS ++++ L PI A
Sbjct: 1 MAAVERLGWQAHAMPALRIEPIMDAV--LPLARTQAVLLTSGQAIAALAGRVRPDMPILA 58
Query: 76 IGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYL 135
+G +A R GFT + + +LA + + L L+ L
Sbjct: 59 VGAVTARRMRDAGFTDVTVAAGTAADLADL--ARDRLDPGAGSLLVPTAPTYGQDLAVAL 116
Query: 136 IEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLP----AK 189
+ Y + P+ ++ L LFY+ + F A
Sbjct: 117 RRAGFRVSRRCVYRVRPAGAPDAAVRTALAGGVIDAALFYSAETARQFLRHLPAGGHAAL 176
Query: 190 ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ + +S + +A+ + + VA P + ++L L R
Sbjct: 177 RNIRAIAISKSTEAALSTATWRAIQVAARPDQAAILDRLGRR 218
>gi|303271217|ref|XP_003054970.1| urophorphyrin III synthase [Micromonas pusilla CCMP1545]
gi|226462944|gb|EEH60222.1| urophorphyrin III synthase [Micromonas pusilla CCMP1545]
Length = 348
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 79/243 (32%), Gaps = 21/243 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSS 57
+V+TR K E++ + G V MPL L + + + ITS
Sbjct: 78 RVVLTRESGKNGDMMERLTRRGIECVEMPLIETAVGADAPSLPSALNDPEGWTWVCITSP 137
Query: 58 ES----LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI-------- 105
E+ L I +G+ +A + + + + + A
Sbjct: 138 EAAAVFLRGWEQAGQPDVAIATVGKGTAKVLKPAYDAGKLRARTFTPSKANAETLVAELP 197
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ ++Y +D L + + ++ Y ++ + + + +
Sbjct: 198 LDADDASAPAAPRVLYPASAKAASTLQDGLAKRGAIVTRLNTYSTEKVTAVDEDVLTRAK 257
Query: 166 NADAILFYARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
AD + F + S+V + SL PA+ A+ C+ A A A V A P
Sbjct: 258 TADVVTFGSPSAVKAWVSLSGFDSDTPAETHPAYACIGGTSAKACDAVGIPNVMFAENPG 317
Query: 221 ETS 223
Sbjct: 318 LDG 320
>gi|182677010|ref|YP_001831156.1| uroporphyrinogen III synthase HEM4 [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182632893|gb|ACB93667.1| uroporphyrinogen III synthase HEM4 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 246
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 85/238 (35%), Gaps = 13/238 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ITRP ++ALR+ K++ GY ++ P+ S + + TS+++
Sbjct: 1 MLVLITRPFEEALRSAAKLEGAGYSALLSPVLTMRATGASW---PEGVVDGVIATSAQAF 57
Query: 61 STL----PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
L + + + + + E +P
Sbjct: 58 DLLVLRPEWPLPEALRLMPLWLVGDRTGDAAHRKGFDGPVRLAPHAKLLAQEITAALSPP 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYA 174
LIYL G+ R E L + + + + Y ++ + L+ D + Y+
Sbjct: 118 ARLIYLAGQDRKPDLEKKLSKAGLTVEAQEIYAAEAVDQLSDIALESLRRNDVGAAMHYS 177
Query: 175 RSSVLYFFSLPLPAKISAAF---LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
R S F L A++ A +C+S ++A + + VA E +L L
Sbjct: 178 RRSAEIFLGLMRKAELDPATFVHICMSEDVAVPLKDAGCA-TQVAATSNEEGMLDALK 234
>gi|16803595|ref|NP_465080.1| uroporphyrinogen-III synthase [Listeria monocytogenes EGD-e]
gi|224501505|ref|ZP_03669812.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL R2-561]
gi|255029221|ref|ZP_05301172.1| uroporphyrinogen-III synthase [Listeria monocytogenes LO28]
gi|16410984|emb|CAC99633.1| lmo1555 [Listeria monocytogenes EGD-e]
Length = 240
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 69/232 (29%), Gaps = 6/232 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + GY + +PL + ++ QQ + +TS+ ++
Sbjct: 4 KVVLTREASKNKPWQTYFSQNGYEVMSIPLIKTQPIKINLT-REQQETDWLFLTSANAVE 62
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
N + + F + + E + ++
Sbjct: 63 YFFTNQYERSNYKIAVIGEKTKEKLAEFGHEPSFVPSIYQSEVFLEEWLNENPEKTSILL 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
+D LIE + I+ Y + + + L I+F + S+
Sbjct: 123 PQSNLSRTIIKDTLIEKGYIVFSIELYETIFPEASKKLLTEQLKLNETQIIVFASPSAWK 182
Query: 180 YFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S+ K + + AI A V L L+
Sbjct: 183 NFYSIAKSFPAQKEKWHIASIGSITTEAILADGWEVKYQPKTFTMKHLADLI 234
>gi|153953355|ref|YP_001394120.1| hypothetical protein CKL_0719 [Clostridium kluyveri DSM 555]
gi|219853984|ref|YP_002471106.1| hypothetical protein CKR_0641 [Clostridium kluyveri NBRC 12016]
gi|146346236|gb|EDK32772.1| HemD [Clostridium kluyveri DSM 555]
gi|219567708|dbj|BAH05692.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 490
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 66/236 (27%), Gaps = 13/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
+ ITR +++ + K+ ++G + ++ E++ L Y I +TS S
Sbjct: 251 NVCITRSREQSYEVKNKLIELGAEVTEINAIKILNTSENMDGYLNKLHRYDFIVMTSVNS 310
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
++ + + + + AK + + K +
Sbjct: 311 VNIFFNYLKEKRYDIRNVKGKFAVIGSATERTLMENGIYADMRAKEFSSKNLEEALMKKV 370
Query: 120 I------YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
K LI+ + + Y D + F
Sbjct: 371 KKSDSILIPCSKLSRGKIAQSLIDFGCQVDEVHIYEPVQGEMSGE---KAFDEVDVVFFT 427
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+V ++ K+ + + + + ++ ++K L
Sbjct: 428 SPSTVRNMINMVGLDKLRRKINIAIGPITFKELEKHSISS-LISDEFTTKGMIKKL 482
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 47/160 (29%), Gaps = 5/160 (3%)
Query: 77 GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLI 136
+ ++L+K + + + + +++ ++ LI
Sbjct: 210 MNIVEKAKSENLKAPCIIVVGEVVSLSKYLNWYNNMELYGTNVCITRSREQSYEVKNKLI 269
Query: 137 EHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA---- 192
E + I+ + + N L D I+ + +SV FF+ +
Sbjct: 270 ELGAEVTEINAIKILNTSENMDGYLNKLHRYDFIVMTSVNSVNIFFNYLKEKRYDIRNVK 329
Query: 193 -AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
F + + + + A +L + L +
Sbjct: 330 GKFAVIGSATERTLMENGIYADMRAKEFSSKNLEEALMKK 369
>gi|74219204|dbj|BAE26738.1| unnamed protein product [Mus musculus]
Length = 265
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 88/258 (34%), Gaps = 33/258 (12%)
Query: 1 MYIVITR-PIKKALRT---QEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIA 53
M +++ + + ++++ G ++P+ F L+ + +G +
Sbjct: 1 MKVLLLKDAKEDDSGLDPYIQELRLCGLEATLIPVLSFEFMSLPSLSEKLSHPEGFGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEA----------------SACLARQKGFTQIFHGKD 97
TS ++ + + A ++ +A L + G G
Sbjct: 61 FTSPRAVEAVKLCLEKDNKTEAWEKSLKDRWNAKSVYVVGSATASLVNKIGLDAEGAGSG 120
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
N+ LA+ I + P L++ G + L + IP+ + Y + +
Sbjct: 121 NAEKLAEYICSKPSSELP---LLFPCGTIKGDTLPKMLKDKGIPMESMHVYQTVPHPGIQ 177
Query: 158 TTMKNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYK 210
++K+ ++ F++ S SV Y +L + F+ + + A+ A
Sbjct: 178 GSLKSYYEDQGIPASITFFSPSGLKYSVEYIQALSGSSFDQIKFIAIGPSTTRAMAAKGL 237
Query: 211 NVVTVACFPKETSLLKLL 228
V A P +L +
Sbjct: 238 PVSCTAESPTPQALAAGI 255
>gi|254828210|ref|ZP_05232897.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL N3-165]
gi|258600599|gb|EEW13924.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL N3-165]
Length = 240
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 69/232 (29%), Gaps = 6/232 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + GY + +PL + ++ QQ + +TS+ ++
Sbjct: 4 KVVLTREASKNKPWQTYFSQNGYEVMSIPLIKTQPIKINLS-REQQETDWLFLTSANAVE 62
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
N + + F + + E + ++
Sbjct: 63 YFFTNQYERSNYKIAVIGEKTKEKLAEFGHEPSFVPSIYQSEVFLEEWLNENPEKTSILL 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
+D LIE + I+ Y + + + L I+F + S+
Sbjct: 123 PQSNLSRTIIKDTLIEKGYIVFSIELYKTIFPEASKKLLTEQLKLNETQIIVFASPSAWK 182
Query: 180 YFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S+ K + + AI A V L L+
Sbjct: 183 NFYSIAKSFPAQKEKWHIASIGSITTEAILADGWEVKYQPKTFTMKHLADLI 234
>gi|222475301|ref|YP_002563718.1| HemD [Anaplasma marginale str. Florida]
gi|222419439|gb|ACM49462.1| HemD [Anaplasma marginale str. Florida]
Length = 237
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 85/234 (36%), Gaps = 13/234 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ TR + +++ ++++G+ + P+ +H R QSY +TS +
Sbjct: 5 MLVL-TRASADSAKSKGALEELGFDVFVEPMFEVVHLRTEA--LKLQSYDVTVVTSRNGV 61
Query: 61 ST-LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
R I +G+++ A GFT + ++ + + +
Sbjct: 62 DVIAKLTDERDICILTVGDSTMKRATALGFTNVVSAGGTVRDVISCLNAYQR----GTKV 117
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSS 177
+Y G+ ++ + + Y A +LL N + ++FY+ +
Sbjct: 118 LYARGEEVSYDLRGAAEKMGFEVEEAVLYKVVARANLSPQCCDLLMNGEILGVVFYSTRT 177
Query: 178 VLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F L + +S+ + A+ + V+ P E SL KLL
Sbjct: 178 AKIFTELSRQYSRLLRNVCAYSMSSGVFRALNVGAWKRILVSRRPTEESLFKLL 231
>gi|241762463|ref|ZP_04760540.1| uroporphyrinogen III synthase HEM4 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753475|ref|YP_003226368.1| uroporphyrinogen-III synthase-like protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|241372965|gb|EER62632.1| uroporphyrinogen III synthase HEM4 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552838|gb|ACV75784.1| Uroporphyrinogen-III synthase-like protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 242
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 98/231 (42%), Gaps = 12/231 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
++I RP A T ++ +K+G+ + PL+ I S+ ++ S+ A+ +TS++++
Sbjct: 14 KLLILRPEPGATATAKRAEKVGWQVIKTPLATAISIPWSINESL--SFDAVMVTSAQAIY 71
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + P++ +G+A+ ARQ GF I + N ++ + + L
Sbjct: 72 HGGSELDKLKDYPLYVVGKATEAAARQAGFQHIVTAEGNGASVLCCLE----RDKRMRIL 127
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
G +++ ++++ ++ + Y Q+IA L +L ++
Sbjct: 128 RLCGEIYKDYDYKNFSLKENTQFFIKILYRMQNIASLPIEACQALVENAIVLLHSSRFAE 187
Query: 180 YFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F L I+ +S +A I + +A +P +TSLLK
Sbjct: 188 QFRLLLAKTDINPDRVQIAVISPAVAEQIGKE-WRAMAIAEYPDDTSLLKA 237
>gi|124024900|ref|YP_001014016.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. NATL1A]
gi|123959968|gb|ABM74751.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. NATL1A]
Length = 261
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/251 (13%), Positives = 63/251 (25%), Gaps = 28/251 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSS 57
I+ITR +++ +E +K G +P + L ++ I +S+
Sbjct: 7 KIIITRALEQTSEAREIFRKNGAEVFDLPSLVIGPPDDWEPLDGALKEITTFDWIIFSSA 66
Query: 58 ESLSTLPANFC----------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + + I A+G +A L F +A +V
Sbjct: 67 NGVRNVDERMKEIGLSLSEISENIQIAAVGRKTASLLEDMDVKVSFVPP---SFVADSLV 123
Query: 108 EQKVLFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ- 165
E L D + + Y S + L
Sbjct: 124 EYFPQNQKGLKLFIPRVQTGGRSILSDSFKLKGAEVTEVAAYESSCPKDIPQKTIDALNS 183
Query: 166 -NADAILFYARSSVLY----FFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVA 216
D I F + +V F + + + + + A
Sbjct: 184 GQIDIIAFTSSKTVKNTVSLFTKHFGENWLKLIQKIQLVSIGPQTTISCKNLIRKPDKEA 243
Query: 217 CFPKETSLLKL 227
LL+
Sbjct: 244 SPHDLEGLLQA 254
>gi|47096720|ref|ZP_00234305.1| uroporphyrinogen-III synthase [Listeria monocytogenes str. 1/2a
F6854]
gi|254831956|ref|ZP_05236611.1| uroporphyrinogen-III synthase [Listeria monocytogenes 10403S]
gi|254898278|ref|ZP_05258202.1| uroporphyrinogen-III synthase [Listeria monocytogenes J0161]
gi|254912229|ref|ZP_05262241.1| uroporphyrinogen-III synthase [Listeria monocytogenes J2818]
gi|254936557|ref|ZP_05268254.1| uroporphyrinogen-III synthase [Listeria monocytogenes F6900]
gi|284801946|ref|YP_003413811.1| uroporphyrinogen-III synthase [Listeria monocytogenes 08-5578]
gi|284995088|ref|YP_003416856.1| uroporphyrinogen-III synthase [Listeria monocytogenes 08-5923]
gi|47014904|gb|EAL05852.1| uroporphyrinogen-III synthase [Listeria monocytogenes str. 1/2a
F6854]
gi|258609151|gb|EEW21759.1| uroporphyrinogen-III synthase [Listeria monocytogenes F6900]
gi|284057508|gb|ADB68449.1| uroporphyrinogen-III synthase [Listeria monocytogenes 08-5578]
gi|284060555|gb|ADB71494.1| uroporphyrinogen-III synthase [Listeria monocytogenes 08-5923]
gi|293590204|gb|EFF98538.1| uroporphyrinogen-III synthase [Listeria monocytogenes J2818]
Length = 240
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 69/232 (29%), Gaps = 6/232 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + GY + +PL + ++ QQ + +TS+ ++
Sbjct: 4 KVVLTREASKNKPWQTYFSQNGYEVMSIPLIKTQPIKINLS-REQQETDWLFLTSANAVE 62
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
N + + F + + E + ++
Sbjct: 63 YFFTNQYERSNYKIAVIGEKTKEKLAEFGHEPSFVPSIYQSEVFLEEWLNENPEKTSILL 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
+D LIE + I+ Y + + + L I+F + S+
Sbjct: 123 PQSNLSRTIIKDTLIEKGYIVFSIELYETIFPEASKKLLTEQLKLNETQIIVFASPSAWK 182
Query: 180 YFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S+ K + + AI A V L L+
Sbjct: 183 NFYSIAKSFPAQKEKWHIASIGSITTEAILADGWEVKYQPKTFTMKHLADLI 234
>gi|313618765|gb|EFR90669.1| uroporphyrinogen-III synthase [Listeria innocua FSL S4-378]
Length = 240
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 77/234 (32%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
IV+TR K Q+ + G+ +PL + S+ L + + +TS+ ++
Sbjct: 4 KIVLTREASKNKPWQDYFSQNGFDVESIPLIETHPKKISLSLNQ-KEADWLFLTSANAVE 62
Query: 62 TLPANFCR--HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ I IGE + + G+ F + + E T Q +
Sbjct: 63 YFFNEQAGKLNYKIAVIGEKTKEKLAEYGYKPNFVPSVYQSEVI--LSEWLSENTSQTSI 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSS 177
+ ED L ++ + I+ Y + +T + L I+F + S+
Sbjct: 121 LLPQSNLSRTIIEDTLTQNGHLVFPIELYETSFPENSQTILIEQLKLDEKRIIIFASPSA 180
Query: 178 VLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+++ + + N AI A V L L+
Sbjct: 181 WKNFYTIAKQFSIKNENWRIASIGNITTEAILADGWEVTYQPKTFTMKHLADLI 234
>gi|262196638|ref|YP_003267847.1| uroporphyrin-III C-methyltransferase [Haliangium ochraceum DSM
14365]
gi|262079985|gb|ACY15954.1| uroporphyrin-III C-methyltransferase [Haliangium ochraceum DSM
14365]
Length = 525
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/260 (13%), Positives = 80/260 (30%), Gaps = 29/260 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAITSSE 58
+++ R +A +++++G PV+MP++ E ++ SY TS+
Sbjct: 261 RVLVPRAEHQAASFAARLRELGAEPVLMPVTRVAAPAEPDPAWAQVLESSYTWTIFTSAN 320
Query: 59 SLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ A + +G A+ +G + V
Sbjct: 321 AVEQFFAALRARGRDARFLGGARLACVGRATEAALAAQGLICDLLPERGDAAGVAAAVLA 380
Query: 110 KVLFTPQ----KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + ++ L ++ + Y S+ ++++ +
Sbjct: 381 ASEAAGESVAAQRVLLPRAAEGREEAIAALRAAGCAVQPLTVYRSETTPSDHPSVEDGVH 440
Query: 166 -----NADAILFYARSSVLYFFSLPLPAKIS--------AAFLCLSNNIASAIPASYKNV 212
DA+ F+A S V + A ++ A + +A+ V
Sbjct: 441 ALRTGAIDAVAFFAPSQVQALLDIAEAAGLTQAEVVERCAIVAAIGATTQAALEQRGIAV 500
Query: 213 VTVACFPKETSLLKLLPLRR 232
P+ L++ L R
Sbjct: 501 HAAPERPEAALLVEALIAAR 520
>gi|78484458|ref|YP_390383.1| uroporphyrinogen III methylase [Thiomicrospira crunogena XCL-2]
gi|78362744|gb|ABB40709.1| uroporphyrinogen-III synthase [Thiomicrospira crunogena XCL-2]
Length = 264
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/248 (9%), Positives = 64/248 (25%), Gaps = 22/248 (8%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES-VFLAMQQSYGAIAITSSESLST 62
+ TRP+++A + +++ G+ + P ++ + S ++
Sbjct: 11 LNTRPVEQAEALSQSVREKGHQVLACPTLKICPRSLPQQAGVTLSTFDKVFFISQNAVKQ 70
Query: 63 LPANF---CRHTPIFAIGEASACLARQKGFTQI------FHGKDNSINLAKIIVEQKVLF 113
+ + P+FA + + N ++ + +
Sbjct: 71 FVDMWQSAYQTHPVFAEKTECFAIGQSTYNAMKALDWPVAKVHSNQYVTEALLQSEVLQN 130
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY-PETTMKNLLQNADAILF 172
+ + + GK + LI + Y + +L
Sbjct: 131 LTDQQCLIVKGKGGRPTLAEGLIAAGATVTEWAVYERVPADFCDAQWQVFRSARHPVLLI 190
Query: 173 YARSSVLYFFSLPLPAKISAA----------FLCLSNNIASAIPASYKN-VVTVACFPKE 221
+ + + + + + S+ I A+ + V
Sbjct: 191 SSLDAWYGLEKMLKNSGYGSKNDQAWLFLQDVIVFSDRIKHALQQQEWQGRLFVVPQQSN 250
Query: 222 TSLLKLLP 229
+L L
Sbjct: 251 AGILTALE 258
>gi|71909285|ref|YP_286872.1| uroporphyrinogen-III synthase [Dechloromonas aromatica RCB]
gi|71848906|gb|AAZ48402.1| uroporphyrinogen-III synthase [Dechloromonas aromatica RCB]
Length = 260
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 63/243 (25%), Gaps = 18/243 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
IV+TRP +A E I G P++ PL + L +SY S
Sbjct: 12 IVVTRPQAQAAPLAEAIAAAGGKPLVFPLLEISPATDPQPLIEAVARLESYSLAVFISPN 71
Query: 59 SLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ P + LA + F + + + E
Sbjct: 72 AVDHALPAILAHGGWPVSLKPAAVGQGTARELAAKGVFGCVVPSERFDSEALLELPEMAA 131
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--A 169
+ ++ G D L E + I CY + + Q+ A
Sbjct: 132 ESVNGRRVVIFRGDGGRELLADTLRERGASVDCITCYRRSGPSAGVQPLLAAWQSGQLDA 191
Query: 170 ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ + + Y IA A + + + +L
Sbjct: 192 LTVSSSEGLRYLVDRLDAEGRAFLQKTPLFVPHARIAENARALGLSNIILTEAAD-AGIL 250
Query: 226 KLL 228
L
Sbjct: 251 AGL 253
>gi|148241377|ref|YP_001226534.1| uroporphyrinogen-III synthase [Synechococcus sp. RCC307]
gi|147849687|emb|CAK27181.1| Uroporphyrinogen-III synthase [Synechococcus sp. RCC307]
Length = 262
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 67/250 (26%), Gaps = 22/250 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSE 58
+V+TR + ++ + G + +P L+ + + + ++S+
Sbjct: 10 VVLTRAEHQLGAARKLFEAAGAQVLDLPALVIGPPDSWGPLDDALSELEDFHWLVVSSAN 69
Query: 59 SLSTLPANFCRHTPIFAIGEAS-------ACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ + A AS A+Q +A ++E
Sbjct: 70 GVTAVDERLQAQGRSLARRPASLKIAAVGRKTAQQLEDLGATADFIPPDFVADSLLENFP 129
Query: 112 LFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-- 168
+ + ++ + E + + Y S+ L+
Sbjct: 130 VGVWGQRILLPRVQSGGRTLLAEAFGEAGARVSEVAAYESRCPKDLPALTAAALEAGMAE 189
Query: 169 AILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
AI F + +V + L A + + ++ +V A
Sbjct: 190 AICFSSGKTVRHTVQLLEAQFGESWNEHISRLAVISIGPQTSAVCRELLGHVDAEADPHD 249
Query: 221 ETSLLKLLPL 230
L+
Sbjct: 250 LDGLVAACSR 259
>gi|159477165|ref|XP_001696681.1| uroporphyrinogen-iii synthase [Chlamydomonas reinhardtii]
gi|158275010|gb|EDP00789.1| uroporphyrinogen-iii synthase [Chlamydomonas reinhardtii]
Length = 297
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/240 (15%), Positives = 81/240 (33%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-----SVFLAMQQSYGAIAITS 56
+++TR K + + + + GY + +PL + ++ A Y +AITS
Sbjct: 46 KVLLTREEGKNDKLRAALTRKGYTCLELPLIAHTDGPDRPLLPALLRAAADQYEWVAITS 105
Query: 57 SESLSTLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
E S + + A+G + + G T + + E +
Sbjct: 106 PEGASVFLEGWAAAGKPKLRVAAVGGGTGEALQAGGVTPEYVPSKALGKVMG--SELPRV 163
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ ++Y + +D L E + I+ Y + +A + AD + +
Sbjct: 164 PGGSRRVLYPASVKASTDLQDSLTEAGFEVHRINTYNTTSVASVPEALLREALTADVVTY 223
Query: 173 YARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYK-NVVTVACFPKETSLLKLLPL 230
+ S+V + L +A C+ + A A + V P ++ +
Sbjct: 224 GSPSAVKAWVGLAGLEAANAKVNACIGSTSARACANAGITQHVYFPDAPGIEGWVEAVEK 283
>gi|126695468|ref|YP_001090354.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9301]
gi|126542511|gb|ABO16753.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9301]
Length = 265
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/248 (10%), Positives = 63/248 (25%), Gaps = 22/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I+ITR + L ++ G +P + L + I +SS
Sbjct: 12 NIIITRSKEGILDIKKIFTSKGANVFDLPAISIGDPDDLNPLDEALNQINDFHWIIFSSS 71
Query: 58 ESL-------STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ ++ + I ++ I +A+ +++
Sbjct: 72 NGIKFVDKRLRYFNSSLKECSKKTKIAVVGEKTSKTLDDFGIKADFIPPEFVAESLIDNF 131
Query: 111 VLFTPQKPLIYLGGKPRNFH-FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + + D + + Y ++ +++ N
Sbjct: 132 PVSGYGLRVFVPRVQTGGRDLIADQFRMAGARVFEVAAYETRCPDSIPEETIDIISNRKV 191
Query: 170 --ILFYARSSVLY--------FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
I+F + +V+ L L + + V + A
Sbjct: 192 DAIIFSSGKTVVNAAFLLEKKLGKQWLDYFDQIKLLSIGPQTTKICNKIFGRVDSQAQKY 251
Query: 220 KETSLLKL 227
LL L
Sbjct: 252 TFEGLLDL 259
>gi|330957338|gb|EGH57598.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 258
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 70/229 (30%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + G +PL + Y A+ + S
Sbjct: 5 RLLLTRPAEESAALARVLADAGIFSNSLPLLETEPLPLTPAQRSIIFELLDYSAVIVVSK 64
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P F++G A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPLQPWFSVGSATGQILLDYGLQASWPEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNAD 168
+ TP ++ + G D L E + + + Y Y T+ L+ +
Sbjct: 125 AIATPGSRVLIMRGDEGRELLADQLREQGVDVDYLALYRRYLPQYAPDTLLQRVTLERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVT 214
++ + + + + S +A A+ V
Sbjct: 185 GLVVSSGQGFEHLLQMAGDSWPDLAGLPLFVPSPRVADIARAAGARTVI 233
>gi|118093167|ref|XP_423886.2| PREDICTED: similar to Uroporphyrinogen-III synthase (UROS)
(Uroporphyrinogen-III cosynthetase) (Hydroxymethylbilane
hydrolyase [cyclizing]) (UROIIIS) [Gallus gallus]
Length = 269
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/258 (13%), Positives = 76/258 (29%), Gaps = 28/258 (10%)
Query: 1 MYIVITR-PIKKAL---RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS---YGAIA 53
M +++ + P K +++ G+ ++P+ F YG +
Sbjct: 1 MKVLLLKDPKDKESGPDPYVKELGLYGFEATLIPVLSFEFVSLEGLFEKLSHPECYGGLV 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF------------HGKDNSIN 101
TS +L + ++ A ++ K + +
Sbjct: 61 FTSPRALEAIKICLRENSKNEAWSKSLKQEWNAKPTYVVGKATASLVEEIGLCPQGEKSG 120
Query: 102 LAKIIVEQK--VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
A+ + E PL++ G + L E IPL + Y + + + +
Sbjct: 121 NAEKLAEYICSREGPHSSPLLFPCGALKREVLPTALKEKGIPLESLTVYQTAQHEHLQQS 180
Query: 160 MKNLLQNADAI---LFYARSSV----LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV 212
+ + +F++ S V + L F + A A+ A+ V
Sbjct: 181 LSSYFSQQGVPASIVFFSPSGVKFCLQHIQKLSGDFANRIKFAAIGPTTAEAMEAAGIPV 240
Query: 213 VTVACFPKETSLLKLLPL 230
A P L +
Sbjct: 241 SCTAESPTPQDLTAGIQK 258
>gi|116872984|ref|YP_849765.1| uroporphyrinogen-III synthase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741862|emb|CAK20986.1| uroporphyrinogen-III synthase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 240
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 75/234 (32%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K E + G+ +PL + + +F Q+ + +TS ++
Sbjct: 4 KIILTREANKNKPWNEYFSQNGFTVESIPLIET-YPKHIIFDLAQKEADWVFLTSVNAVE 62
Query: 62 TLPANFCR--HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
A H IGE + + G+ F + + E Q +
Sbjct: 63 YFFATRIDKAHYKYAVIGERTKEKLAEYGYKPAFVPSIYQSEV--FLSEWLNENQQQTRI 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSS 177
+ ED LI + I Y + + +K LQ I+F + S+
Sbjct: 121 LLPQSNLSRSIMEDTLIAKGHLVSPIVLYETIFPNDSKALLKKQLQLNEKKIIVFASPSA 180
Query: 178 VLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S+ K + + N AI A V L L+
Sbjct: 181 WKNFYSIAGSFSNQKDNWCIASIGNVTTEAILADGWKVTYQPKTFTMKHLADLI 234
>gi|297181825|gb|ADI18004.1| uroporphyrinogen-III synthase [uncultured delta proteobacterium
HF0200_19J16]
Length = 269
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 67/252 (26%), Gaps = 23/252 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY----GAIAITSS 57
I++TR +Q G V ++ I TSS
Sbjct: 18 RILVTRQDTPESSLSVLLQSQGAKVVTAAMTKIIPPESWESFDKTVKSSLKIDWAVFTSS 77
Query: 58 ESLSTL----------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+S P F I +G++++ + G + + +I
Sbjct: 78 NGVSFCVSRLEDLQIDPRFFFSKIKIACVGQSTSSALSRHGISAELIPEHFQS--EGLID 135
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ K + + L + + Y + + + L A
Sbjct: 136 SFSLYDLKNKRCWLIQAEFPRKTLSLALKKQGAKIISTPVYRTVPSEKDVSFLLEELDKA 195
Query: 168 --DAILFYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
D I+F + S+V + + C+ S + +V
Sbjct: 196 ILDWIIFASPSAVQKLHQVLPDGFWESLMVKPKIACIGETTESFVKKLGWSVQLRPEIQD 255
Query: 221 ETSLLKLLPLRR 232
L+K L ++
Sbjct: 256 FEHLVKSLCEKK 267
>gi|150400123|ref|YP_001323890.1| uroporphyrinogen III synthase HEM4 [Methanococcus vannielii SB]
gi|150012826|gb|ABR55278.1| Uroporphyrinogen III synthase HEM4 [Methanococcus vannielii SB]
Length = 246
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 71/244 (29%), Gaps = 27/244 (11%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +VITRPI+K E ++K G+ P+++P + Y I TS +
Sbjct: 1 MKVVITRPIEKGSNFGEILKKEGFEPILIPTLDLVF---KNINLKIDDYSWIVFTSPRGV 57
Query: 61 STLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
L N + + F + N +++ K
Sbjct: 58 EGLLKNLSLEDVKKVTSKKIGVIGIETAKEFKNIFGKDADIIPNLYTAENLLLALKKEVK 117
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--------- 165
+ ++ +++ + ++ Y S++ + + +L +
Sbjct: 118 SHEKVLIPTTPSTRD-----VLKEGLNAELVFVYSSEEPNDIDKKIDDLKKITANENKSG 172
Query: 166 NADAILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F + + FF + + + + + + +
Sbjct: 173 RKIVLTFTSSLTARNFFKHVDLSFLEVLKKQEVVSIGPITKKTVDSFGFDSKMHPENYTT 232
Query: 222 TSLL 225
++
Sbjct: 233 KGMV 236
>gi|113954596|ref|YP_731754.1| uroporphyrinogen-III synthase [Synechococcus sp. CC9311]
gi|113881947|gb|ABI46905.1| uroporphyrinogen-III synthase [Synechococcus sp. CC9311]
Length = 269
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 75/251 (29%), Gaps = 29/251 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
IV+TR ++ ++ +++ G + +P E LA + + +S+
Sbjct: 14 IVVTRAREQLGEARKLLEQQGARVLDLPALEIGPPDEWGPLDDALAELDEFHWVIFSSAN 73
Query: 59 SLSTLPANF----------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + I A+G +A L Q G F +A ++E
Sbjct: 74 GVQAVDKRLRLQGSSLGQRPAGLRIGAVGRKTARLLDQLGAPADFVPP---DFVADSLIE 130
Query: 109 QKVLFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-- 165
+ L+ + E + + Y S+ A + L
Sbjct: 131 HFPVSGWGLRLLLPRVQSGGRTLLAEAFGEAGARVVEVPAYESRCPANMPESTAKALASG 190
Query: 166 NADAILFYARSSVLYFFSLPLPAK---------ISAAFLCLSNNIASAIPASYKNVVTVA 216
DAI F + +VL+ +L S A + + + + V A
Sbjct: 191 EVDAITFSSGKTVLHTAALLEQTLGSETASRAINSIALVSIGPQTSQRCLEQFGRVDQEA 250
Query: 217 CFPKETSLLKL 227
L +
Sbjct: 251 NPHDLDGLTQA 261
>gi|34495507|ref|NP_899722.1| uroporphyrinogen-III synthase [Chromobacterium violaceum ATCC
12472]
gi|34101363|gb|AAQ57732.1| uroporphyrinogen-III synthase [Chromobacterium violaceum ATCC
12472]
Length = 243
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 67/237 (28%), Gaps = 12/237 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSES 59
++ RP+ + EK++ G+ +PL E + A A+ S +
Sbjct: 3 RVLAARPLAQCAGLLEKLRAEGWQAGHLPLMEIEPLPEALAALPAQAARADALFWVSPSA 62
Query: 60 LSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ A A++ + + ++ ++
Sbjct: 63 IDVGWPALAGMDFSGKRLACVGAASARRLADLSGRPVLHPTAGSDSEALLALPELADASG 122
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ + + G+ D L + V + Y DA++ +
Sbjct: 123 QRWLIVRGQGGRPLLADTLAARGAEVGVAEVYRRV--DGAPDWAAFDAAPPDAVIITSGE 180
Query: 177 SVLYFFSLPLPAK---ISAAFLC-LSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
V F L P + + C IA + A + V + +L+ L
Sbjct: 181 MVEQLFRLAGPRRTGALQCLLYCVPHPRIAERLAAFGAARI-VTTRADDAALVAGLK 236
>gi|311069307|ref|YP_003974230.1| uroporphyrinogen-III synthase [Bacillus atrophaeus 1942]
gi|310869824|gb|ADP33299.1| uroporphyrinogen-III synthase [Bacillus atrophaeus 1942]
Length = 263
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 63/242 (26%), Gaps = 17/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSSE 58
+++TR +A Q+K++ +G V L F + + G + TS
Sbjct: 13 VLVTRNKAQAASFQQKVEALGGSAVSASLITFQKALPNEYANKLQKDLSEPGWLVFTSVN 72
Query: 59 SLSTLPANFCRHTPIFAIGEASAC-----LARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + + A + ++ + K
Sbjct: 73 GAQFFFSYLKENRLPHPAQKKIAAVGEKTARYLQTRHVTVDVMPDTYIAECLADTLKKHA 132
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAIL 171
+ + G + L +R Y + ++ + D I
Sbjct: 133 LISDRVTVIKGNLSRGVIKTELEPLGFQVREWVLYNTIPDEQGIAELRQASGRSSFDYIT 192
Query: 172 FYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + SSV F ++ + A+ + + +L
Sbjct: 193 FTSSSSVHTFMHALGNGERVWENDRTNYISIGPLTQEALMQYGISSH-IPETFTVEGMLT 251
Query: 227 LL 228
L+
Sbjct: 252 LM 253
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 9/90 (10%), Positives = 23/90 (25%), Gaps = 4/90 (4%)
Query: 146 DCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNI 201
+ ++ L ++F + + +FFS ++ +
Sbjct: 42 ITFQKALPNEYANKLQKDLSEPGWLVFTSVNGAQFFFSYLKENRLPHPAQKKIAAVGEKT 101
Query: 202 ASAIPASYKNVVTVACFPKETSLLKLLPLR 231
A + + V + L L
Sbjct: 102 ARYLQTRHVTVDVMPDTYIAECLADTLKKH 131
>gi|269958651|ref|YP_003328438.1| uroporphyrinogen 3 synthase [Anaplasma centrale str. Israel]
gi|269848480|gb|ACZ49124.1| uroporphyrinogen 3 synthase [Anaplasma centrale str. Israel]
Length = 235
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 85/234 (36%), Gaps = 13/234 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ TR + +++ ++++G+ + P+ +H R QSY +TS +
Sbjct: 3 MLVL-TRASADSAKSKGALEELGFDVFVEPMFEVVHLRTEA--LKLQSYDVTVVTSRNGV 59
Query: 61 ST-LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
R I +G+++ A GFT + ++ + + +
Sbjct: 60 DVIAKLTDERDICILTVGDSTMKRATALGFTNVVSAGGTVRDVVSCLNAYQR----GTKV 115
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSS 177
+Y G+ ++ + + Y A +LL N + ++FY+ +
Sbjct: 116 LYARGEEVSYDLRGAAEKMGFEVEEAVLYKVVARANLSPQCCDLLMNGEILGVVFYSTRT 175
Query: 178 VLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F L + +S+ + A+ + V+ P E SL KLL
Sbjct: 176 AKIFTELSRQYSRLLRNVCAYSMSSGVFRALDVGAWKRILVSRRPTEESLFKLL 229
>gi|113460194|ref|YP_718251.1| uroporphyrinogen-III synthase [Haemophilus somnus 129PT]
gi|112822237|gb|ABI24326.1| uroporphyrinogen-III synthase [Haemophilus somnus 129PT]
Length = 222
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 57/220 (25%), Gaps = 16/220 (7%)
Query: 26 PVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSESLSTLPA------NFCRHTPIFA 75
+ +PL I +E L + S ++ R +
Sbjct: 2 ALHLPLISIIAGQELNRLPNKLQQLNCGDYVVAVSKNAVEYAQKTLSAVGFCWRSDLYYF 61
Query: 76 IGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYL 135
+ + ++ ++ + ++ L F +
Sbjct: 62 TVGQRTAEYFASQIENSVYYPVEQESSEGLLNLPQMQDLQARNILILRANGGREFFTEQA 121
Query: 136 IEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFSLPLP----AK 189
I + ++CY I Y E D I+ ++ + Y L
Sbjct: 122 ILRGAKVETLECYQRMPIEYNKLEKISLCQRIGVDTIVVTSQEMLNYLVKLVPTNETGWL 181
Query: 190 ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S + +S IA+ + + VA SL L
Sbjct: 182 FSCRLVTVSQRIAALAKSVGWTNIVVADKADNLSLFLALQ 221
>gi|255003285|ref|ZP_05278249.1| HemD [Anaplasma marginale str. Puerto Rico]
gi|255004411|ref|ZP_05279212.1| HemD [Anaplasma marginale str. Virginia]
Length = 235
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 85/234 (36%), Gaps = 13/234 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ TR + +++ ++++G+ + P+ +H R QSY +TS +
Sbjct: 3 MLVL-TRASADSAKSKGALEELGFDVFVEPMFEVVHLRTEA--LKLQSYDVTVVTSRNGV 59
Query: 61 ST-LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
R I +G+++ A GFT + ++ + + +
Sbjct: 60 DVIAKLTDERDICILTVGDSTMERATALGFTNVVSAGGTVRDVISCLNAYQR----GTKV 115
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSS 177
+Y G+ ++ + + Y A +LL N + ++FY+ +
Sbjct: 116 LYARGEEVSYDLRGAAEKMGFEVEEAVLYKVVARANLSPQCCDLLMNGEILGVVFYSTRT 175
Query: 178 VLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F L + +S+ + A+ + V+ P E SL KLL
Sbjct: 176 AKIFTELSRQYSRLLRNVCAYSMSSGVFRALNVGAWKRILVSRRPTEESLFKLL 229
>gi|254995118|ref|ZP_05277308.1| HemD [Anaplasma marginale str. Mississippi]
Length = 235
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 85/234 (36%), Gaps = 13/234 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ TR + +++ ++++G+ + P+ +H R QSY +TS +
Sbjct: 3 MLVL-TRASADSAKSKGALEELGFDVFVEPMFEVVHLRTEA--LKLQSYDVTVVTSRNGV 59
Query: 61 ST-LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
R I +G+++ A GFT + ++ + + +
Sbjct: 60 DVIAKLTDERDICILTVGDSTMERATALGFTNVVSAGGTVRDVISCLNAYQR----GTKV 115
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSS 177
+Y G+ ++ + + Y A +LL N + ++FY+ +
Sbjct: 116 LYARGEEVSYDLRGAAEKMGFEVEEAVLYKVVARANLSPQCCDLLMNGEILGVVFYSTRT 175
Query: 178 VLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F L + +S+ + A+ + V+ P E SL KLL
Sbjct: 176 AKIFTELSRQYSGLLRNVCAYSMSSGVFRALNVGAWKRILVSRRPTEESLFKLL 229
>gi|56416935|ref|YP_154009.1| hypothetical protein AM830 [Anaplasma marginale str. St. Maries]
gi|56388167|gb|AAV86754.1| hypothetical protein AM830 [Anaplasma marginale str. St. Maries]
Length = 267
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 85/234 (36%), Gaps = 13/234 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ TR + +++ ++++G+ + P+ +H R QSY +TS +
Sbjct: 35 MLVL-TRASADSAKSKGALEELGFDVFVEPMFEVVHLRTEA--LKLQSYDVTVVTSRNGV 91
Query: 61 ST-LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
R I +G+++ A GFT + ++ + + +
Sbjct: 92 DVIAKLTDERDICILTVGDSTMERATALGFTNVVSAGGTVRDVISCLNAYQR----GTKV 147
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSS 177
+Y G+ ++ + + Y A +LL N + ++FY+ +
Sbjct: 148 LYARGEEVSYDLRGAAEKMGFEVEEAVLYKVVARANLSPQCCDLLMNGEILGVVFYSTRT 207
Query: 178 VLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F L + +S+ + A+ + V+ P E SL KLL
Sbjct: 208 AKIFTELSRQYSRLLRNVCAYSMSSGVFRALNVGAWKRILVSRRPTEESLFKLL 261
>gi|134094242|ref|YP_001099317.1| uroporphyrinogen III synthase [Herminiimonas arsenicoxydans]
gi|133738145|emb|CAL61190.1| uroporphyrinogen III synthase (UROS) (Uroporphyrinogen-III
cosynthetase) (Hydroxymethylbilane hydrolyase
[cyclizing]) [Herminiimonas arsenicoxydans]
Length = 260
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 72/252 (28%), Gaps = 24/252 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSE 58
+VITRP+ +A ++ +G + PL + + L Y IA S
Sbjct: 9 VVITRPLAQAEGLARRVTALGRKATVFPLLDILPLADQASLQQALRDLSGYALIAFVSPN 68
Query: 59 SLSTLPANFCRHTPIFAIGEASACLA--------RQKGFTQIFHGKDNSINLAKIIVEQK 110
++ A + + T I + + ++ E
Sbjct: 69 AIDAALAARADWPRDIPMAVVGEGSRLALARHGLTAENSTIISPTDLDRTDSETLLAELD 128
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT---MKNLLQNA 167
+ K ++ + G+ + L + ++ Y + T +K LL
Sbjct: 129 LPALRNKQILIVRGETGRPLLSEALRAAGAQVTLLAAYRRVAPVFDATRRRELKRLLHGQ 188
Query: 168 DAILFYARSSVLYFFSLPLP--------AKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+ + + ++ + + + I + +TV
Sbjct: 189 NDWIVTSSEALRFLMQMVAQLDEAEGVAKMQQQRIIVSHIRIGETAQLLGFSNITVTRS- 247
Query: 220 KETSLLKLLPLR 231
+ LL L R
Sbjct: 248 GDDGLLAALQSR 259
>gi|291485229|dbj|BAI86304.1| uroporphyrinogen III cosynthase [Bacillus subtilis subsp. natto
BEST195]
Length = 262
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 70/239 (29%), Gaps = 17/239 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYF-IHDRESVFLA---MQQSYGAIAITSSE 58
+++TR +A Q+K++ +G V+ L F V + G + TS
Sbjct: 12 VLVTRNKAQATSFQQKVEALGGKAVLTSLITFRRALPNDVAEQVREDLAAPGWLVFTSVN 71
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ-----KVLF 113
+ + I + A + + H + + I EQ K
Sbjct: 72 GADFFFSYLKENQLILPAHKKIAAVGEKTARRLQTHNVSVDVMPQEYIAEQLADALKQHA 131
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAIL 171
P +P+ + G + L+ ++ Y + +K+ + D +
Sbjct: 132 EPGEPITVMKGNLSRDVIKQELVPLGFEVKEWVLYETIPDEEGIEALKDAAGQYSFDYVT 191
Query: 172 FYARSSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLL 225
F + S+V F + + + A+ +L
Sbjct: 192 FTSSSTVHTFMHVLGEELKKWKANGTACISIGPLTNDALLTYGITSH-TPDTFTIDGML 249
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 6/123 (4%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIP--LRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
K ++ K + F+ + L + + ++ L ++F
Sbjct: 8 KGKTVLVTRNKAQATSFQQKVEALGGKAVLTSLITFRRALPNDVAEQVREDLAAPGWLVF 67
Query: 173 YARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +FFS ++ + A + +V + L L
Sbjct: 68 TSVNGADFFFSYLKENQLILPAHKKIAAVGEKTARRLQTHNVSVDVMPQEYIAEQLADAL 127
Query: 229 PLR 231
Sbjct: 128 KQH 130
>gi|56552798|ref|YP_163637.1| uroporphyrinogen III synthase HEM4 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56544372|gb|AAV90526.1| uroporphyrinogen III synthase HEM4 [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 242
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 97/231 (41%), Gaps = 12/231 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
++I RP A T ++ +K+G+ + PL+ I S+ ++ S+ A+ +TS++++
Sbjct: 14 KLLILRPEPGATATAKRAEKVGWQVIKTPLATAISIPWSINESL--SFDAVMVTSAQAIY 71
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + P++ +G+A+ ARQ GF I + N ++ + + L
Sbjct: 72 HGGSELDKLKDYPLYVVGKATEAAARQAGFQHIVTAEGNGASVLCCLE----RDKRMRIL 127
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
G +++ ++++ + + Y Q+IA L +L ++
Sbjct: 128 RLCGEIYKDYEYKNFSRKENTQFFIKILYRMQNIASLPIEACQALVENAIVLLHSSRFAE 187
Query: 180 YFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F L I+ +S +A I + +A +P +TSLLK
Sbjct: 188 QFRLLLAKTDINPDRVQIAVISPAVAEQIGKE-WRAMAIAEYPDDTSLLKA 237
>gi|89074444|ref|ZP_01160921.1| hypothetical uroporphyrinogen III synthase [Photobacterium sp.
SKA34]
gi|89049732|gb|EAR55282.1| hypothetical uroporphyrinogen III synthase [Photobacterium sp.
SKA34]
Length = 248
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/242 (10%), Positives = 68/242 (28%), Gaps = 18/242 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M ++ITRP R E++ + PL L ++ I S
Sbjct: 1 MTVLITRPAPDCYRLAEQLNAAAISAIAQPLLTLKAGDGLSSLLRQINALKAGDYIITVS 60
Query: 57 SESLSTLPAN-------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
S++ + ++ AIG +A + ++ + ++
Sbjct: 61 HHSVTFAHDYLISQGAAWPKNVHYIAIGHKTAATLTKLSGQRVLSPEHRCD-SEGLLALP 119
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD- 168
++ + ++ L G L + + Y + + Q+
Sbjct: 120 ELAHITDRNILILRGNGGRELIHQALTARHAVVNYCETYQRCWLDLDGEKLVAQWQHQQL 179
Query: 169 -AILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + +++ + ++ L S +A ++ +
Sbjct: 180 DTLVITSAEQLVFLTTRIPTQHLTWFLNCHLLVPSQRVAEQATTLGFMNISTVGSASNHA 239
Query: 224 LL 225
L
Sbjct: 240 LF 241
>gi|88854553|ref|ZP_01129220.1| uroporphyrinogen-III synthase [marine actinobacterium PHSC20C1]
gi|88816361|gb|EAR26216.1| uroporphyrinogen-III synthase [marine actinobacterium PHSC20C1]
Length = 250
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 83/238 (34%), Gaps = 12/238 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++ IPV+ PL F LA + IA+T
Sbjct: 10 RVLVPRGGNWGDSVAALLRGHSAIPVIAPLINFAPSENVPALANAFHELNDGQFDWIAVT 69
Query: 56 SSESLSTLPA---NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
S+ ++ L A +T I A+GE +A G F + ++ +V++ +
Sbjct: 70 SATTVDVLTASGVRIPENTKIAAVGETTASALALAGHRVDFVPELDNSGRG--LVKEWID 127
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-NADAIL 171
TP ++ + D L + + + Y + + + ++++ AI+
Sbjct: 128 RTPGLRVLAPQSNLADTTLTDGLGALGLEVVSVSAYCTVGVPVADHIREDVVSGRISAIV 187
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ S P S C+ A A+ V +A SL++ L
Sbjct: 188 ISSGSVARQVAEQLAPLPESMIVACIGPRTAFDARAAGLTVQVIAEDRSSESLVETLA 245
>gi|90581041|ref|ZP_01236841.1| hypothetical uroporphyrinogen III synthase [Vibrio angustum S14]
gi|90437737|gb|EAS62928.1| hypothetical uroporphyrinogen III synthase [Vibrio angustum S14]
Length = 248
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 22/241 (9%), Positives = 63/241 (26%), Gaps = 16/241 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M ++ITRP + E++ + PL L + ++ I S
Sbjct: 1 MTVLITRPAPDCYQLAEQLNAAAISAIAQPLLTLKAGDGLSSLLLQINALKAGDYIIAVS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+++ + K Q ++ + ++ +
Sbjct: 61 HHAVTFAHDYLVSQGAAWPKNVHYVAVGHKTAATLTKLSGQRVLSPEHRCDSEGLLALPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-- 168
+ + ++ L G L + + Y + + Q+
Sbjct: 121 LAKVTDRNILILRGNGGRELIHQALTARHAVVNYCETYQRCWLDLDGEKLVAQWQHQQLD 180
Query: 169 AILFYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++ + +++ + ++ L S +A ++ +L
Sbjct: 181 TLVITSAEQLVFLTTRIPTQHLTWFLNCHLLVPSQRVAEQATTLGFMNISTVGSASNHAL 240
Query: 225 L 225
Sbjct: 241 F 241
>gi|148685827|gb|EDL17774.1| uroporphyrinogen III synthase, isoform CRA_d [Mus musculus]
Length = 287
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/258 (14%), Positives = 88/258 (34%), Gaps = 33/258 (12%)
Query: 1 MYIVITR-PIKKALRT---QEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIA 53
M +++ + + ++++ G ++P+ F L+ + +G +
Sbjct: 23 MKVLLLKDAKEDDSGLDPYIQELRLCGLEATLIPVLSFEFMSLPSLSEKLSHPEGFGGLI 82
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEA----------------SACLARQKGFTQIFHGKD 97
TS ++ + + A ++ +A L + G G
Sbjct: 83 FTSPRAVEAVKLCLEKDNKTEAWEKSLKDRWNAKSVYVVGSATASLVNKIGLDAEGAGSG 142
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
N+ LA+ I + P L++ G + L + IP+ + Y + +
Sbjct: 143 NAEKLAEYICSKPSSELP---LLFPCGTIKGDTLPKMLKDKGIPMESMHVYQTVPHPGIQ 199
Query: 158 TTMKNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYK 210
++K+ ++ F++ S S+ Y +L + F+ + + A+ A
Sbjct: 200 GSLKSYYEDQGIPASITFFSPSGLKYSLEYIQALSGSSFDQIKFIAIGPSTTRAMAAKGL 259
Query: 211 NVVTVACFPKETSLLKLL 228
V A P +L +
Sbjct: 260 PVSCTAESPTPQALAAGI 277
>gi|6678519|ref|NP_033505.1| uroporphyrinogen-III synthase [Mus musculus]
gi|1708176|sp|P51163|HEM4_MOUSE RecName: Full=Uroporphyrinogen-III synthase; Short=UROIIIS;
Short=UROS; AltName: Full=Hydroxymethylbilane hydrolyase
[cyclizing]; AltName: Full=Uroporphyrinogen-III
cosynthase
gi|506638|gb|AAA81898.1| uroporphyrinogen III synthase [Mus musculus]
gi|953228|gb|AAA74742.1| uroporphyrinogen III synthase [Mus musculus]
gi|1041679|gb|AAA79978.1| uroporphyrinogen III synthase [Mus musculus]
gi|45768802|gb|AAH68161.1| Uroporphyrinogen III synthase [Mus musculus]
gi|74195253|dbj|BAE28354.1| unnamed protein product [Mus musculus]
gi|148685822|gb|EDL17769.1| uroporphyrinogen III synthase, isoform CRA_a [Mus musculus]
gi|148685823|gb|EDL17770.1| uroporphyrinogen III synthase, isoform CRA_a [Mus musculus]
gi|148685826|gb|EDL17773.1| uroporphyrinogen III synthase, isoform CRA_a [Mus musculus]
Length = 265
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/258 (14%), Positives = 88/258 (34%), Gaps = 33/258 (12%)
Query: 1 MYIVITR-PIKKALRT---QEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIA 53
M +++ + + ++++ G ++P+ F L+ + +G +
Sbjct: 1 MKVLLLKDAKEDDSGLDPYIQELRLCGLEATLIPVLSFEFMSLPSLSEKLSHPEGFGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEA----------------SACLARQKGFTQIFHGKD 97
TS ++ + + A ++ +A L + G G
Sbjct: 61 FTSPRAVEAVKLCLEKDNKTEAWEKSLKDRWNAKSVYVVGSATASLVNKIGLDAEGAGSG 120
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
N+ LA+ I + P L++ G + L + IP+ + Y + +
Sbjct: 121 NAEKLAEYICSKPSSELP---LLFPCGTIKGDTLPKMLKDKGIPMESMHVYQTVPHPGIQ 177
Query: 158 TTMKNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYK 210
++K+ ++ F++ S S+ Y +L + F+ + + A+ A
Sbjct: 178 GSLKSYYEDQGIPASITFFSPSGLKYSLEYIQALSGSSFDQIKFIAIGPSTTRAMAAKGL 237
Query: 211 NVVTVACFPKETSLLKLL 228
V A P +L +
Sbjct: 238 PVSCTAESPTPQALAAGI 255
>gi|297567359|ref|YP_003686331.1| Uroporphyrinogen III synthase HEM4 [Meiothermus silvanus DSM 9946]
gi|296851808|gb|ADH64823.1| Uroporphyrinogen III synthase HEM4 [Meiothermus silvanus DSM 9946]
Length = 234
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 74/231 (32%), Gaps = 15/231 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M + +T + +E+++ GY V PL + V L ++ +S ++
Sbjct: 1 MTVALTHAEGRLEGLRERLETQGYRVVHYPLIATQTL-QGVSLEPLEACCWWLFSSQAAV 59
Query: 61 STLPANFCRH--TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ R + A+GE +A R G + A+ + + + P
Sbjct: 60 RAVVELGGRFAGHRLGAVGEGTAKALRDLGLEVELVSPEGH---AESLARAFIAWQAPGP 116
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
+ G D L + + Y + +P L + + S+V
Sbjct: 117 VGLPRGNRALPTLADLLEGAGYEVHALTVYKTLTQPWPPDAPIPDL-----TVLASPSAV 171
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
P+ + L + A ++ A + + A P ++ +
Sbjct: 172 EAL---PVEVARQTHCIALGPSTAQSLRACGLS-YSQAQSPTVEGVIAAIE 218
>gi|294054672|ref|YP_003548330.1| uroporphyrin-III C-methyltransferase [Coraliomargarita akajimensis
DSM 45221]
gi|293614005|gb|ADE54160.1| uroporphyrin-III C-methyltransferase [Coraliomargarita akajimensis
DSM 45221]
Length = 526
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/244 (14%), Positives = 74/244 (30%), Gaps = 20/244 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSY----FIHDRESVFLAMQQSYGAIAITSS 57
+V+TR ++A + + +++ G + +P F + + A Y I TS+
Sbjct: 271 RLVVTRAREQAGQLTQLLEEQGAEVLELPFIEVKEHFEPNTLTEVFAEMAVYEWIIFTSA 330
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ T F + I A+G A+A + + +
Sbjct: 331 NGVKTFFELFYKAYQDIRCLGPMRIAAVGAATAREIEKHHLKVDLIPPKANADALATKFI 390
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQN 166
+ K L+ G + R + E + + + Y + + +
Sbjct: 391 EDEGIDSVKMLVVTGNQNRETLVKRLEDEGRAIVDTLPLYKTSRTNLSQHPAAERYRKEG 450
Query: 167 ADAILFYARSSVLYFFSL-----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
ADA+LF + S+V F F + + + + A
Sbjct: 451 ADAVLFTSSSTVKSFMDQQSVLELEDGAREPVFGSIGPLTSKTLSELDLPIAFEAAQSSL 510
Query: 222 TSLL 225
+
Sbjct: 511 DHFV 514
>gi|115378211|ref|ZP_01465383.1| uroporphyrinogen-III synthase [Stigmatella aurantiaca DW4/3-1]
gi|115364799|gb|EAU63862.1| uroporphyrinogen-III synthase [Stigmatella aurantiaca DW4/3-1]
Length = 220
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/216 (13%), Positives = 57/216 (26%), Gaps = 16/216 (7%)
Query: 29 MPLSYFIHDRES----VFLAMQQSYGAIAITSSESLSTLPANFCR--------HTPIFAI 76
+P+ + Q Y + S ++ L H I +
Sbjct: 3 LPMLELRPPEDPRPLAAAAESIQRYRWVVFASPSAVEALMEALREAGTVDRLSHVRIAVV 62
Query: 77 GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLI 136
G +A G + + + P+ ++ G+ E L
Sbjct: 63 GPRTARTVEGYGLKVTAEPAE--ATGLGLFAAIRDALHPEDEVLLPAGEEGRRELELALR 120
Query: 137 EHKIPLRVIDCYYSQDIAYPETTMKN-LLQNADAILFYARSSVLYFFSLPLPAKI-SAAF 194
E + + + Y S + D +LF + + F + +A
Sbjct: 121 EQGVRVTRVTAYRSTPAPLSPEAQEALGQMPPDVVLFASPRTAEVFLEATGAEGLGAAKV 180
Query: 195 LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ + AS + V VA P L+
Sbjct: 181 VAIGPTTASVLARLGIGVAAVAERPTPEGLVDATVR 216
>gi|239624017|ref|ZP_04667048.1| uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase
[Clostridiales bacterium 1_7_47_FAA]
gi|239522048|gb|EEQ61914.1| uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase
[Clostridiales bacterium 1_7_47FAA]
Length = 512
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/255 (10%), Positives = 55/255 (21%), Gaps = 27/255 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSY----FIHDRESVFLAMQQSYGAIAITSS 57
+ IT + A + + + G + SY + TS+
Sbjct: 255 RVGITGTEQFAGKLAAALSEQGAQVSWLVNMKVEDHIEEAPMQAAYRNLPSYTWLVFTSA 314
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKG-------FTQIFHGKDNSINLAKIIVEQK 110
+ + G + ++ +
Sbjct: 315 NGVRLFFQGLFKDGRDCRCLGHVKFAVIGDGTGRELSGYGFNADYMPDAYCAKALADGLV 374
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+P L+ + L+ I I Y + + + D I
Sbjct: 375 HAVSPGDRLLIARSAGGSPILAQTLLNAGIHFDDIVLYE-VTGQPSASFIPEEVMGFDYI 433
Query: 171 LFYARSSVLYFFSLPLP---------------AKISAAFLCLSNNIASAIPASYKNVVTV 215
F + S V FF + +C+ A +
Sbjct: 434 TFASASGVRAFFDCLTQGGTGDKAVGIQGPAVHPKNPKLVCIGAVTARELERQGYKADIT 493
Query: 216 ACFPKETSLLKLLPL 230
A L+K +
Sbjct: 494 AAQYHIEGLVKAIIK 508
>gi|296331639|ref|ZP_06874108.1| uroporphyrinogen-III synthase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675402|ref|YP_003867074.1| uroporphyrinogen III cosynthase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151234|gb|EFG92114.1| uroporphyrinogen-III synthase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305413646|gb|ADM38765.1| uroporphyrinogen III cosynthase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 262
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 70/242 (28%), Gaps = 17/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYF-IHDRESVFLA---MQQSYGAIAITSSE 58
+++TR +A Q+K++ +G V+ L F + + G + TS
Sbjct: 12 VLVTRNKAQAKSFQQKVEALGGKAVLTSLITFRRALPNDLAKQVKEDLAAPGWLVFTSVN 71
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ-- 116
+ + + I + A + + H + I EQ Q
Sbjct: 72 GVDFFFSYLKENQLILPAHKKIAAVGEKTACRLETHNVSVDVMPKDYIAEQLAEALKQHA 131
Query: 117 ---KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAIL 171
+ + + G + L+ ++ Y + + + D +
Sbjct: 132 EQAERITVVKGNLSRDVIKQELVPLGFEVKEWVVYETIPDEEGIEALIEAASQYSFDYVT 191
Query: 172 FYARSSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + S+V F + + + A+ + +L+
Sbjct: 192 FTSSSTVHTFMHVLGEELKKWKANRAACISIGPLTRDALLTYDITSH-MPDTFTIDGMLE 250
Query: 227 LL 228
L+
Sbjct: 251 LM 252
Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 35/123 (28%), Gaps = 6/123 (4%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIP--LRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
K ++ K + F+ + L + + +K L ++F
Sbjct: 8 KGKTVLVTRNKAQAKSFQQKVEALGGKAVLTSLITFRRALPNDLAKQVKEDLAAPGWLVF 67
Query: 173 YARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + V +FFS ++ + A + +V + L + L
Sbjct: 68 TSVNGVDFFFSYLKENQLILPAHKKIAAVGEKTACRLETHNVSVDVMPKDYIAEQLAEAL 127
Query: 229 PLR 231
Sbjct: 128 KQH 130
>gi|146305322|ref|YP_001185787.1| uroporphyrinogen-III synthase [Pseudomonas mendocina ymp]
gi|145573523|gb|ABP83055.1| Uroporphyrinogen III synthase HEM4 [Pseudomonas mendocina ymp]
Length = 257
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 72/231 (31%), Gaps = 18/231 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
+++TRP + + + + G MPL E+ + A Q Y A+ + S
Sbjct: 5 RLLLTRPAEDCAALAQTLAEHGITGSCMPLLGIEPLPETAEQRIAFAELQRYCAVIVVSK 64
Query: 58 ESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII--VE 108
+ A H P FA+G A+A L + G + + + + ++
Sbjct: 65 PAARLGLALLDGHRAEPVTGQPWFAVGAATAALLTEHGLPVHYPERGDDSEALLALPALQ 124
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQN 166
+ ++ L G+ L + + Y YP + + +
Sbjct: 125 GALAAESAPRVLILRGEGGREFLGQCLRGQGASVDYLPLYRRVLPPYPAGELSRRVQAER 184
Query: 167 ADAILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVT 214
+ ++ + + L S +A A+ +V
Sbjct: 185 LNGLVVSSGQGFEHLLQLAGDDWPALARLPLFVPSPRVAEQARAAGAQIVV 235
>gi|290893311|ref|ZP_06556297.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL J2-071]
gi|290557119|gb|EFD90647.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL J2-071]
Length = 493
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/241 (9%), Positives = 67/241 (27%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVVDVAPTKTKEELSEVSELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + I ++I+E
Sbjct: 312 RFSDYLTKLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQK 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ G + + ++ + ++ Y + + L + + + F +
Sbjct: 372 NAS-NLIIGSMVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSS 426
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SV + + + L + ++ + + N A SL++L+
Sbjct: 427 RSVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINNFIEAESATPESLIELIQKT 486
Query: 232 R 232
+
Sbjct: 487 K 487
>gi|289423383|ref|ZP_06425187.1| uroporphyrinogen-III synthase/methyltransferase [Peptostreptococcus
anaerobius 653-L]
gi|289156141|gb|EFD04802.1| uroporphyrinogen-III synthase/methyltransferase [Peptostreptococcus
anaerobius 653-L]
Length = 522
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 73/261 (27%), Gaps = 34/261 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSSE 58
I +TR ++AL+ KI++ G +++P + Y +A TS
Sbjct: 254 IALTRDTRQALKWLPKIEERGARTLIIPSIKIEPSHVDLYPDAEKPIFDGYDCLAFTSPN 313
Query: 59 SLSTLPANFCRHTPIFAIGEASACLA--------------------RQKGFTQIFHGKDN 98
+ + + +
Sbjct: 314 GVKYFMQAMKDSYLDIRSLASIKIACLGHGTLDELMSYGVQPDILTFESNGGSLSEAIAG 373
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ E + K +I G ++ L +H+I L V++ Y ++
Sbjct: 374 YYEHMLLTGETRRTAKKIKKVILAGSNLSGESLKEGLKKHRIKLDVLEVYTNKPNIDHYQ 433
Query: 159 TMKNLLQNADA--ILFYARSSVLYFFSLPLPA--------KISAAFLCLSNNIASAIPAS 208
+++ + + ++F + SS L + + A A+
Sbjct: 434 MIEDKIASTRIDYMVFASPSSFYSISDLVKEDKDDSLGQRLSDIKSVAIGKTTARAMLDM 493
Query: 209 YKNVVTVACFPKETSLLKLLP 229
V+ P +L L+
Sbjct: 494 GYEPTIVSDEPSIDRILDLIE 514
>gi|170033607|ref|XP_001844668.1| uroporphyrinogen iii synthase [Culex quinquefasciatus]
gi|167874636|gb|EDS38019.1| uroporphyrinogen iii synthase [Culex quinquefasciatus]
Length = 267
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 71/239 (29%), Gaps = 18/239 (7%)
Query: 2 YIVITRPIKKALRT-QEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAITSS 57
+V+ + T +QK G+ PV++P F V L Y + TS
Sbjct: 3 KVVVLKSESDNSDTYSSLLQKHGFEPVLVPTLDFSFKNLDVLRDRLLSPYKYSGLIFTSP 62
Query: 58 ESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
S++ L ++ + + N+ NLA I
Sbjct: 63 RSITAVRDALGGQRLKDDWRTLENYSVGETSHDLICSHLQLNTKGQQSGNASNLADFIKT 122
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-- 166
T P ++ G + + L E+ L ++ Y + E + L +
Sbjct: 123 DLYNKTITLPFLFPCGNLKQDVLQYKLSEYGYSLDSVEVYETVPHKDLERNLVQLFRGDA 182
Query: 167 ADAILFYARSSV---LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+LF++ S + F + + + AI V A P
Sbjct: 183 PAFLLFFSPSGINYCSAIFERNKLDLGGCRIVAIGPSTKKAIENKGLTVYRTAEKPSPD 241
>gi|315497776|ref|YP_004086580.1| uroporphyrinogen iii synthase hem4 [Asticcacaulis excentricus CB
48]
gi|315415788|gb|ADU12429.1| Uroporphyrinogen III synthase HEM4 [Asticcacaulis excentricus CB
48]
Length = 227
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 79/237 (33%), Gaps = 25/237 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I ITR +A T + ++ G+ V PL + + + I TS L
Sbjct: 5 IWITRTEPQASVTAQALRARGFDVVNDPLLEVEYCSPDID---VARFPHIVATSINGLKA 61
Query: 63 L-PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
RH ++ +G+A+A AR+ GF + + +L +++ PQ PL+Y
Sbjct: 62 FTRQYATRHQTVWTVGDATAREAREAGFVTVHSAGGDVEDLIRLL----KSEAPQGPLLY 117
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
+ L L + Y + + IL Y+
Sbjct: 118 PQPETPARDLSMALS--GFDLHPVLFYRTV--ERDARDARAQRAAITHILLYSPRGAQAC 173
Query: 182 FSLPLPAKISAAFLCLSNNIASAIPAS----------YKNVVTVACFPKETSLLKLL 228
P A +SA LC+S A + + V P E +L L
Sbjct: 174 A--PYLAGMSARVLCISEATAQRLREHLNFTGNLPSAGL-NIEVVASPDEEALFARL 227
>gi|238756297|ref|ZP_04617612.1| Uroporphyrinogen-III synthase [Yersinia ruckeri ATCC 29473]
gi|238705503|gb|EEP97905.1| Uroporphyrinogen-III synthase [Yersinia ruckeri ATCC 29473]
Length = 225
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 65/225 (28%), Gaps = 17/225 (7%)
Query: 22 MGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIG 77
MG + PL F R+ LA Q+ + S ++ R+ +
Sbjct: 1 MGRVAYHAPLIDFSPGRDLPRLPAILAEMQAGDLVFALSQNAIRYANPLLNRNKLFWPAE 60
Query: 78 ------EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHF 131
S LA +++ + K ++ L G
Sbjct: 61 LSYYAIGRSTALALHTVSHLKVTFPPAGETSEMLLLLPDLQDLRGKKVLLLRGNGGRELL 120
Query: 132 EDYLIEHKIPLRVIDCYYSQDI--AYPETTMKNLLQNADAILFYARSSVLYFFSLPLP-- 187
+ L + +CY I E + D ++ + + ++L
Sbjct: 121 GESLAARGAEVTFCECYQRSPIYYEGSEQSAHWQRSGVDMLVVTSGEMLQQLYTLIPDYY 180
Query: 188 ---AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + +S+ +A+ + + VA +L++ L
Sbjct: 181 RSSWLLRCRLIVVSDRLATLASQLGWSDIRVAENADNDALIRALQ 225
>gi|326924124|ref|XP_003208282.1| PREDICTED: uroporphyrinogen-III synthase-like [Meleagris gallopavo]
Length = 268
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 76/257 (29%), Gaps = 27/257 (10%)
Query: 1 MYIVITR-PIKKAL---RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIA 53
M +++ + P K +++ G+ ++P+ F + YG +
Sbjct: 1 MKVLLLKDPKDKESGPDPYVKELGLCGFEATLIPVLSFEFVSLEDLFEKLSHPERYGGLV 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFH------------GKDNSIN 101
TS +L + + A ++ K + +
Sbjct: 61 FTSPRALEAIKICLREKSKNEAWSKSLKQQWNTKPTYVVGKATASLVEEIGLSPQGEKSG 120
Query: 102 LAKIIVEQ-KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
A+ + E L++ G + L E IPL + Y + + + ++
Sbjct: 121 NAEKLAEYICSKKPHSSSLLFPCGALKREVLPTALKEKGIPLESLTVYQTAQHEHLQQSL 180
Query: 161 KNLLQNADAI---LFYARSSV----LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ +F++ S V + L + F + A A+ A+ V
Sbjct: 181 SSYFSQQGIPASIVFFSPSGVKFCLQHIQKLSGDSANQIKFAAIGPTTAEAMEAAGIPVS 240
Query: 214 TVACFPKETSLLKLLPL 230
A P L +
Sbjct: 241 CTAESPTPQDLAAGIQK 257
>gi|332527781|ref|ZP_08403820.1| uroporphyrinogen III synthase [Rubrivivax benzoatilyticus JA2]
gi|332112177|gb|EGJ12153.1| uroporphyrinogen III synthase [Rubrivivax benzoatilyticus JA2]
Length = 257
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 69/234 (29%), Gaps = 19/234 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITS 56
M I++TRP +A ++Q +G +PL + L Y + S
Sbjct: 1 MRIIVTRPADQAAAWVARLQDLGADAAALPLIGIEPAEDPQPLRAAWRSLADYALVMFVS 60
Query: 57 SESLSTLPANFCRHTPIFA-------IGEASACLARQKGFTQIFHGKDN--SINLAKIIV 107
+++ A A +SA L ++ + + + + +
Sbjct: 61 PNAVAHFFALRPAGCDWPAATLAGSVGPGSSAALREAGVGERVVEPAADARAFDSEALWL 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-----TMKN 162
+ + + ++ + G+ + L + + Y + E
Sbjct: 121 QLQDRDWAGRRVLVVRGEDGREWLAETLRGRGAFVEFVAAYRRRPPRPDEAGRALLDAAL 180
Query: 163 LLQNADAILFYARSSVLYFFSLPL-PAKISAAFLCLSNNIASAIPASYKNVVTV 215
+ F + +V + +L + + IA+A A V
Sbjct: 181 AFPHEHLWHFSSSEAVGHLRALAPGADWSRSRAVASHPRIAAAARALGFADVAE 234
>gi|15807683|ref|NP_285335.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Deinococcus radiodurans R1]
gi|6460581|gb|AAF12287.1|AE001862_113 uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Deinococcus radiodurans R1]
Length = 517
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/240 (14%), Positives = 71/240 (29%), Gaps = 20/240 (8%)
Query: 3 IVITRPIKK-ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAITSSES 59
+ +TR ++ + G +PL F+ L A+ G + +TS ++
Sbjct: 281 VAVTRTREQTGSELAALLSGRGAQVSEIPLLRFVPASSPRTLVGALNGFDGWVLLTSEQA 340
Query: 60 LSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ L I A+G +A R+ G F + +
Sbjct: 341 VRALARTLLAAGRDLRVLARARIAAVGSGTAWTLREYGLAPDFVPTRSGSRHLG----AE 396
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ P + +++G + + E L I + Y S+ + LQ A +
Sbjct: 397 LPAAPGEVALHVGSQDTDAVLEMALSARGIEYVAAEAYRSELSELTPAQ-REQLQEAQVV 455
Query: 171 LFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ + S + A + + +A P SL +
Sbjct: 456 TLASAVGARALAQVA---GTSFTAAVIGPQTELAAREAGFTRLILAEQPTLASLSDAVQR 512
>gi|163839971|ref|YP_001624376.1| uroporphyrinogen-III synthase [Renibacterium salmoninarum ATCC
33209]
gi|162953447|gb|ABY22962.1| uroporphyrinogen-III synthase [Renibacterium salmoninarum ATCC
33209]
Length = 278
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 69/257 (26%), Gaps = 33/257 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
++ITR +A + +G P+++PL F SV +Y + ++S ++
Sbjct: 15 VLITRSPDRAGGLVSALLAVGAEPLLLPLIDFEAVDFSVEDLRAGNYSWLVVSSITTVRA 74
Query: 63 LP----------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
L A A S+ + + ++ + A ++ L
Sbjct: 75 LKAAAAKIGLQLAELVPPKTRMATIGPSSRRILEHEGLTVHLAPEDIQSAAGLVAILPRL 134
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ + L + V Y + D + L + +
Sbjct: 135 DGNA--VWLPQSDVAGPALAEGLRAAGAQVSVTTAYRTVDYPASNRLVTELAVGVEPVAA 192
Query: 173 YARSSVLYFFSLPL---------------------PAKISAAFLCLSNNIASAIPASYKN 211
S + + F+ + A A
Sbjct: 193 PMLSLAAARAKIADGSLQAVVAASASAASRIAETLRPLQNTKFIAIGRPTAEQAAAEGIV 252
Query: 212 VVTVACFPKETSLLKLL 228
V +A P ++ +L
Sbjct: 253 VAGIAEQPTPEGIVAVL 269
>gi|262273218|ref|ZP_06051034.1| uroporphyrinogen-III synthase [Grimontia hollisae CIP 101886]
gi|262222796|gb|EEY74105.1| uroporphyrinogen-III synthase [Grimontia hollisae CIP 101886]
Length = 257
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 60/243 (24%), Gaps = 15/243 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITS 56
M +++ RP E + + G + PL F ++ L S + S
Sbjct: 1 MTVLVVRPAPACYELVETLNQSGIKALPAPLLSFSEGKDLPVLTNTYRRLPSGSVVVAVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDN-----SINLAKIIVEQKV 111
++ F + + + + N + + ++
Sbjct: 61 PRAIEYTQQQFRNDNTAWRDDLHYVAVGEKTAQVWLEESGINALQPPTEDSEGMLSLSVF 120
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADA 169
++ L G L + + Y + M+ +N D
Sbjct: 121 GEPEHLEVLILRGNGGRALLGKTLASRGAKVHYFEAYQRHWTSDSLLSLAMQWQAENVDT 180
Query: 170 ILFYARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ + + L S I + N + T+L
Sbjct: 181 LVVTSGEQLSLLCQTISESNQQWLRECHILVPSKRIYNQAIGLGFNTIRCVNSASNTALF 240
Query: 226 KLL 228
L
Sbjct: 241 HAL 243
>gi|88607853|ref|YP_504961.1| hypothetical protein APH_0354 [Anaplasma phagocytophilum HZ]
gi|88598916|gb|ABD44386.1| conserved hypothetical protein [Anaplasma phagocytophilum HZ]
Length = 230
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 79/234 (33%), Gaps = 11/234 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TR + ++++++ + +G+ + P+ + + + Y + TS +
Sbjct: 2 LLLTRAMCDSVKSRDALIALGFDVFIEPMFEVRYLAAEITG--LEGYEVVLATSRHGIIG 59
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
+ + S + + + F A+ ++ + ++Y+
Sbjct: 60 MAQATDNRSIPIVTVGDS---SMKHALSLGFQNVKTVSGTAEDLLHYLRTKSYSSKVLYI 116
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLY 180
G + I + + Y + LL +LFY+ +
Sbjct: 117 RGTNISHDLSKMARNFGITVEELILYETIRSTELSPECCYLLSKRKISGVLFYSMETAKI 176
Query: 181 FFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
F +L + A +S+ + A+ V V+ P E SL +LL
Sbjct: 177 FMNLVEKKYKECLATVAAYTISSRVCDALNTCKWKGVLVSESPTEESLFRLLLK 230
>gi|157412470|ref|YP_001483336.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9215]
gi|157387045|gb|ABV49750.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9215]
Length = 265
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/248 (10%), Positives = 64/248 (25%), Gaps = 22/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I+ITR + L ++ G +P + L + I +SS
Sbjct: 12 NIIITRSKEGILDIKKIFISKGANVFDLPAISIADPDDLNPLDEALNQINDFHWIIFSSS 71
Query: 58 ESL-------STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ ++ + I ++ I +A+ +++
Sbjct: 72 NGIKFVDKRLRYFNSSLKECSKKIKIAVVGEKTSKTLDDFGIKADFIPPEFVAESLIDNF 131
Query: 111 VLFTPQKPLIYLGGKPRNFH-FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + + D + + + Y ++ +++ N
Sbjct: 132 PVSGYGLRVFVPRVQTGGRDLIADQFRKSGSRVFEVAAYETRCPESIPEETIDIISNRKV 191
Query: 170 --ILFYARSSVLYFFSLPLP--------AKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
I+F + +V+ L L + + V + A
Sbjct: 192 DAIIFSSGKTVVNAAFLLEKKLGKQWLEYFDQIKLLTIGPQTTKICNKIFGRVDSQAQKY 251
Query: 220 KETSLLKL 227
LL +
Sbjct: 252 TFDGLLDV 259
>gi|308174512|ref|YP_003921217.1| uroporphyrinogen III cosynthase [Bacillus amyloliquefaciens DSM 7]
gi|307607376|emb|CBI43747.1| uroporphyrinogen III cosynthase [Bacillus amyloliquefaciens DSM 7]
gi|328554431|gb|AEB24923.1| uroporphyrinogen-III synthase [Bacillus amyloliquefaciens TA208]
gi|328912835|gb|AEB64431.1| uroporphyrinogen III cosynthase [Bacillus amyloliquefaciens LL3]
Length = 260
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 76/244 (31%), Gaps = 21/244 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYF-IHDR---ESVFLAMQQSYGAIAITSSE 58
+++TR ++A ++K++ +G V L F G + TS
Sbjct: 12 VLVTRNKRQAAPFRKKVEALGGTAVSASLIAFQEALPGECADSLREDLSEPGWLVFTSVN 71
Query: 59 SLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + H I A+GE +A +++G + +++
Sbjct: 72 GVRFFFSYLDEHGLALSGRKKIAAVGEKTARALKERGAGTDAMPDEYVAECLADTLKRHA 131
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK--NLLQNADA 169
+ +P+ + G + L +R Y + ++ + D
Sbjct: 132 --SAAEPISVIKGNLSRDVIKAELEPLGYQIREWVLYNTIQDEKGMDELRQAASRSHFDF 189
Query: 170 ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
I F + S+V F A+++ + A+ + V +
Sbjct: 190 ITFTSSSAVHTFMHAVGDEKKTLENSGASYISIGPLTEKALLEYGISSH-VPDTYTIEGM 248
Query: 225 LKLL 228
L ++
Sbjct: 249 LDVM 252
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 10/90 (11%), Positives = 24/90 (26%), Gaps = 4/90 (4%)
Query: 146 DCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA----AFLCLSNNI 201
+ +++ L ++F + + V +FFS ++ +
Sbjct: 41 IAFQEALPGECADSLREDLSEPGWLVFTSVNGVRFFFSYLDEHGLALSGRKKIAAVGEKT 100
Query: 202 ASAIPASYKNVVTVACFPKETSLLKLLPLR 231
A A+ + L L
Sbjct: 101 ARALKERGAGTDAMPDEYVAECLADTLKRH 130
>gi|288560800|ref|YP_003424286.1| uroporphyrinogen-III synthase HemD [Methanobrevibacter ruminantium
M1]
gi|288543510|gb|ADC47394.1| uroporphyrinogen-III synthase HemD [Methanobrevibacter ruminantium
M1]
Length = 258
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/252 (13%), Positives = 72/252 (28%), Gaps = 26/252 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY---GAIAITSSE 58
I ITRP +++ +E I+ G +++P + + + + TS
Sbjct: 4 KIAITRPQERSKAAKEFIENYGSEAIIVPTLELKLENTESLKNLMEKSNELDWLIFTSVS 63
Query: 59 SLST-------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
S+ + I IG +A L +KG KD + ++ E +
Sbjct: 64 SIESIFEFYPDFLDKLNPECKIATIGTKTAELGIKKGLPIDIIPKDYTA--EGLLEEFER 121
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----NA 167
+ K + + L + + + Y S K +
Sbjct: 122 IDLNNKNVGVPRTFSARTILPEGLKNMGANVILAESYKSVIPEDTSKIEKLIQCILDEKI 181
Query: 168 DAILFYARSSVLYFFSLPLPAKIS---------AAFLCLSNNIASAIPASYKNVVTVACF 218
D I F + +V F + + + + + N +
Sbjct: 182 DGITFTSPLTVSNLFEIAKDEDKDNLVEKLSTTTLTVAIGPITGNILNQLGVNHIY-PKR 240
Query: 219 PKETSLLKLLPL 230
++ L+
Sbjct: 241 YTVKDMIDLMFR 252
>gi|330444902|ref|ZP_08308557.1| uroporphyrinogen-III synthase HemD family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489212|dbj|GAA03054.1| uroporphyrinogen-III synthase HemD family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 248
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 65/242 (26%), Gaps = 18/242 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITS 56
M ++ITRP + E++ + PL L + I S
Sbjct: 1 MTVLITRPAPDCYQLAEQLNATAISALAQPLLTLKAGDGLSSLLRQLNELTAGDYIIAVS 60
Query: 57 SESLSTLPAN-------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+++ + ++ A+G +A + Q+ ++
Sbjct: 61 HHAVTFAHDYLISQGAAWPKNVHYIAVGHKTAATLTKLSGQQVSSPAHRCD-SEGLLALP 119
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ + ++ L G L + + + Y + + Q+
Sbjct: 120 ELANMAGRNVLILRGNGGRELIHQALTARQAVVNYCETYQRCWLDLDGEKLIQQWQHQHV 179
Query: 170 --ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
++ + +++ + L S +A ++ +
Sbjct: 180 DTLVITSAEQLVFLTQKIPTQHLTWFFHCHLLVPSQRVAEQAATLGFVNISTVGSASNHA 239
Query: 224 LL 225
L
Sbjct: 240 LF 241
>gi|33860673|ref|NP_892234.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633615|emb|CAE18572.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 269
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 65/248 (26%), Gaps = 22/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I+ITR K ++ G P + + L+ + I TSS
Sbjct: 16 NIIITRSKDKISDVKKLFTNKGAQIFDFPAIDVGYPDDLNPLDDALSEINDFHWIIFTSS 75
Query: 58 ESLST-------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ L + + I + I +A+ ++E
Sbjct: 76 NGIQFVDERLRNLNTSLKECSKKIKIAVVGEKTSLTLSDLGIEADFVPPEFVAESLIENF 135
Query: 111 VLFTPQKPLIYLGGKPRNFHF-EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + + +F D + + Y ++ N + N
Sbjct: 136 PVSGYGLRVFLPRVQTGGRNFIADEFRNSGSRVVEVPAYETRCPDSIPIETINAISNRKI 195
Query: 170 --ILFYARSSVLY--------FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
++F + +V F L +A L + + ++ V A
Sbjct: 196 DAMVFSSGKTVSNSSFLLEKEFGEEWLTYLENAKLLTIGPQTSKICGKTFGRVDKEAVKY 255
Query: 220 KETSLLKL 227
LL
Sbjct: 256 TFEGLLDA 263
>gi|307244645|ref|ZP_07526749.1| uroporphyrinogen-III C-methyltransferase [Peptostreptococcus
stomatis DSM 17678]
gi|306492026|gb|EFM64075.1| uroporphyrinogen-III C-methyltransferase [Peptostreptococcus
stomatis DSM 17678]
Length = 507
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 91/246 (36%), Gaps = 20/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+++TR KK ++KI ++G +P ++ + + Y IA+TS
Sbjct: 256 VMVTRTRKKNSELRQKISELGGKTFELPTIDIQDKKDIGKTLIERLESKRYSHIALTSHN 315
Query: 59 SLSTLPANFCRH---------TPIFAIGEASACLARQK-GFTQIFHGKDNSINLAKIIVE 108
S+ N + I ++G A++ R+ I + +LA +I++
Sbjct: 316 SVDIFFKNLVKEGYDFRKLAGIKIASVGSATSRAIRRYGFLPDIESSQSTGQDLAGLILK 375
Query: 109 QKVLFTPQKP-LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
P +++ + + E+ ++ ++ L +D Y + + + +L+
Sbjct: 376 DIGSGGFVSPSVLFPCSEIASRVMEEVMVSGQVDLDRVDLYTNTVNMAIKDELLEILKKE 435
Query: 168 DA--ILFYARSSVLYFFSLPLPAK---ISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D I F + S+V Y + K + + + + I + +
Sbjct: 436 DIDYITFTSSSTVKYLVEILGDDKGLIRDIKKVSIGSITSQTIRDLGFELDIESDQASID 495
Query: 223 SLLKLL 228
S++ +
Sbjct: 496 SMVSAI 501
>gi|17547075|ref|NP_520477.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Ralstonia solanacearum GMI1000]
gi|17429376|emb|CAD16063.1| probable bifunctional: uroporphyrin-III c-methyltransferase and
uroporphyrinogen-III synthase transmembrane protein
[Ralstonia solanacearum GMI1000]
Length = 695
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 65/253 (25%), Gaps = 30/253 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+++TRP +A +++ G + PL LA Y + S
Sbjct: 24 VIVTRPRAQAPMLVAALERHGLRTLQFPLLDIAPTPNLDDLRAALADPSRYALVVFVSPN 83
Query: 59 SLSTLPANFCRHTPI--------------FAIGEASACLARQKGFTQIFHGKDNSINLAK 104
++ A A+ + H D +
Sbjct: 84 AVQQAFAAMPEGFRWPQDVPAAVVGPASAQALAAHGVAAPTYRVIRPDSHADDARQDSEA 143
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS---QDIAYPETTMK 161
+ V + ++ + G D L E + +R ++ Y ++
Sbjct: 144 LYARLDVATLSGREVLIVRGNGGREWLADRLREAGVAVRTVEAYRRSVPVPDTAAWAALR 203
Query: 162 NLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVV 213
+L A + + SL A +A I + V
Sbjct: 204 EVLAGRHAWTLTSSEAARNLDSLARASLSAAEVEALYAAPCFAPHARIVEQAQSLGFRDV 263
Query: 214 TVACFPKETSLLK 226
T+ + LL
Sbjct: 264 TLT-GAGDDRLLA 275
>gi|163784138|ref|ZP_02179080.1| uroporphyrinogen-III synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159880596|gb|EDP74158.1| uroporphyrinogen-III synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 228
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 84/239 (35%), Gaps = 22/239 (9%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I+ITR K + ++ ++ + PL + Y + ITS +
Sbjct: 1 MKNILITREEKLDNKLEKIAKEKDLNIIYCPLIKTTKIEFN--PPDLDKYDYLIITSKNA 58
Query: 60 LSTLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + H + A+GE + + GF +I + NS + ++++K
Sbjct: 59 VKYFLKSIPLEKILHKKVIAVGEKTKKYLKNLGFDEIIIPEINSARGIEKLIQEKQF--K 116
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS---QDIAYPETTMKNLLQNADAILF 172
K +++ + + L ++ Y + + Y E + + D ++F
Sbjct: 117 DKKFLFIRAEKGQEI-------NNKNLDLLIVYKTIFNKPENYKECSKLLIKGEIDYVIF 169
Query: 173 YARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+ F + + + + N A+ + NV V P ++ L
Sbjct: 170 SSPSTFYSFMENFKNYEKLLNNTKIITIGNTTKKAVESKGFNVYFVPKKPSFEEIINAL 228
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 12/118 (10%), Positives = 37/118 (31%), Gaps = 5/118 (4%)
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
K ++ + + E E + + + I + L D ++ ++
Sbjct: 1 MKNILITREEKLDNKLEKIAKEKDLNIIYCPLIKTTKIEFNPPD----LDKYDYLIITSK 56
Query: 176 SSVLYFFSLPLPAK-ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
++V YF K + + + + + + + + KL+ ++
Sbjct: 57 NAVKYFLKSIPLEKILHKKVIAVGEKTKKYLKNLGFDEIIIPEINSARGIEKLIQEKQ 114
>gi|119357594|ref|YP_912238.1| uroporphyrinogen-III synthase [Chlorobium phaeobacteroides DSM 266]
gi|119354943|gb|ABL65814.1| uroporphyrinogen-III synthase [Chlorobium phaeobacteroides DSM 266]
Length = 251
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 55/199 (27%), Gaps = 13/199 (6%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++TRP +A +++K G I V+ P + + + TS S
Sbjct: 1 MKTVLVTRPKDQAEPFVRELEKYGLISVVFPTIEILPVPGWSV-PDLKKFDGAFFTSPNS 59
Query: 60 LSTLPANFCRHTP--------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + P + + + ++ E
Sbjct: 60 VRFFLERLLQEAPLELESLRDMHVWAVGKTTSKDLGVHGIVTEPLPKIADAVNLMAEIDD 119
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA---D 168
K ++L G + + I Y ++ + +T +
Sbjct: 120 AEIKGKSFLFLKGNLSLGIIPELIAAKGGLCTEITVYDNRLPSLEDTAKIKTILQEGGLS 179
Query: 169 AILFYARSSVLYFFSLPLP 187
+ F + S+ FF
Sbjct: 180 CLSFTSPSTAENFFQAIEK 198
>gi|255080092|ref|XP_002503626.1| urophorphyrin III synthase [Micromonas sp. RCC299]
gi|226518893|gb|ACO64884.1| urophorphyrin III synthase [Micromonas sp. RCC299]
Length = 323
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 16/246 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR K ++ G + MPL I+ + L + + + ITS E
Sbjct: 78 VVLTREEGKNGDMCSRLTARGIDCLEMPLIETINGADRDALPAALNDPEGWTWVCITSPE 137
Query: 59 SLSTLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE-QKVLF 113
+ + PI +G +A + + + + + A ++
Sbjct: 138 AAKVFLEGWTEAGRPDLPIATVGAGTARILAEHYASGALAAPTFTPSKANADTMVVELPV 197
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
++Y +D L + +D Y ++++ + + AD + F
Sbjct: 198 DESSRVLYPASAKAASTLQDGLAARGATVTRLDTYSTENVTAVDPAVLARALAADVVTFG 257
Query: 174 ARSSVLYFFSLP---LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS----LLK 226
+ S+V + +L A A+ C+ A A V P +LK
Sbjct: 258 SPSAVKAWMALSGLDPAASDHPAYACIGGTSAKACDKIGLPGVLFPEDPGVDGWEGVVLK 317
Query: 227 LLPLRR 232
L R
Sbjct: 318 ALEAAR 323
>gi|33866742|ref|NP_898301.1| putative uroporphyrinogen III synthase [Synechococcus sp. WH 8102]
gi|33639343|emb|CAE08725.1| putative uroporphyrinogen III synthase [Synechococcus sp. WH 8102]
Length = 262
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 72/249 (28%), Gaps = 26/249 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR + + ++ G + +P + L+ + + + ++S+
Sbjct: 10 VVVTRAADQLGEARRLLETQGAQVLDLPALVIGPPDDWGPLDDALSELEDFHWLVVSSAN 69
Query: 59 SLSTLPANFCR----------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + R + I A+G +A G T F + +I
Sbjct: 70 GVQAVEQRLQRLGRSLLRRPANLRIAAVGRKTARALEDLGATADFVPPSFVADS--LIDH 127
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--N 166
V + L+ + E + + + Y S+ L+
Sbjct: 128 FPVSGYGLRMLLPRVQSGGRTVLAEAFGEAGVRVVEVAAYESRCPDAMPERTAEALEAGT 187
Query: 167 ADAILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
DAILF + + + L + + + + + + + A
Sbjct: 188 VDAILFSSGKTAAHTAQLLLQRFGPGWEQRLETLKLVSIGPQTSRSCREWFGRIDAEADP 247
Query: 219 PKETSLLKL 227
L+
Sbjct: 248 HDLEGLVSA 256
>gi|114705600|ref|ZP_01438503.1| uroporphyrinogen-III synthetase [Fulvimarina pelagi HTCC2506]
gi|114538446|gb|EAU41567.1| uroporphyrinogen-III synthetase [Fulvimarina pelagi HTCC2506]
Length = 233
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 88/234 (37%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
++I R T +++ G+ P+++PL + A+TSS+++S
Sbjct: 3 RVLILRERASGEETARQLRSRGHEPIVLPL---EAVVRLDGEPPTAPFDGFAVTSSQAVS 59
Query: 62 TLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+L P+FA+G A+ GF + G + +L I ++
Sbjct: 60 SLAEAFAGDPRPVFAVGAATGATIEAAGFPNVHFGSGRAASLPDICSTVFGSRDDGATIL 119
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSV 178
Y G R+ E + L + Y A ++ +DA+L +++
Sbjct: 120 YAAGVNRSGSLEAAFADSPFRLLTWEVYDVVRRAPSRDELRGAFDSAPSDAVLLMSQAQA 179
Query: 179 LYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F P LCLS I+ A+P+ ++ ++ P SL + L
Sbjct: 180 IAFAECIAPYWEDNVETVRLLCLSQRISDALPSGLRSRAEISERPTLPSLFERL 233
>gi|163738033|ref|ZP_02145449.1| Uroporphyrinogen III synthase HEM4 [Phaeobacter gallaeciensis
BS107]
gi|161388649|gb|EDQ13002.1| Uroporphyrinogen III synthase HEM4 [Phaeobacter gallaeciensis
BS107]
Length = 255
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 62/227 (27%), Gaps = 12/227 (5%)
Query: 3 IVITRPIKKALRTQEKI---QKMGYIPVMMPLSYFIHDRESVFLAMQQSYGA-IAITSSE 58
+++TRP A R E + + + PL + + +S+
Sbjct: 15 LLMTRPRVAAERFVEDLPASTRATLQVIYAPLIRTTPLNPPSDPSEHGLFSGDAIFSSAN 74
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ A + A + A +V+ P P
Sbjct: 75 GVRYSTAPVAGQNAYCVGQRTTQAAAAKGWRAICCGLD------ADALVQTLTDVPPTGP 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSS 177
L +L G + L I R Y + Y + A I+ ++ +
Sbjct: 129 LTHLRGVHSRGDIVERLRLVGINCREHVIYDQILLPYDSEVRIAMDAQASLIVPLFSPRT 188
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
F L P + S +A + + + P T++
Sbjct: 189 AQQFVKLA-PYCAELHLIAFSKAVADPLKGLKCKDLQICKSPTVTAM 234
>gi|166158337|ref|NP_001107324.1| uroporphyrinogen III synthase [Xenopus (Silurana) tropicalis]
gi|161612293|gb|AAI55999.1| LOC100135131 protein [Xenopus (Silurana) tropicalis]
Length = 262
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 85/254 (33%), Gaps = 32/254 (12%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS---YGAIA 53
M +++ + P K + +++ G ++P+ F F Y +
Sbjct: 1 MKVLLLKDPKTKDLASDPYVKELSSYGLQATLIPVLSFKFVSLDHFFDKLSHPESYAGLI 60
Query: 54 ITSSESLSTLPANF----------------CRHTPIFAIGEASACLARQKGFTQIFHGKD 97
TS ++ + P++ +G+A+A L + G + G
Sbjct: 61 FTSPRAVEAVKLCLQTPDHKEAWNDRLCAKWNSKPVYVVGKATASLVEEIGLSSEGEGSG 120
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
N+ LA+ I + P+++ G + L E K+PL I Y + +
Sbjct: 121 NAEKLAECIC--SKGLSYSAPILFPCGSLKREVLPKKLQEKKVPLETITVYQTAPHPAVQ 178
Query: 158 TTMKNLLQNADAI---LFYARSSVLY---FFSLPLPAKIS-AAFLCLSNNIASAIPASYK 210
++ N +F++ S V Y F +++ F + A A+
Sbjct: 179 DSLMNYFTKEGVPASVVFFSPSGVKYCLKFLKDLPNDQLNQIKFGAIGPTTAEAMAEEGI 238
Query: 211 NVVTVACFPKETSL 224
V A P L
Sbjct: 239 PVSCTALNPTPQDL 252
>gi|78778502|ref|YP_396614.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9312]
gi|78712001|gb|ABB49178.1| uroporphyrinogen-III synthase [Prochlorococcus marinus str. MIT
9312]
Length = 265
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/251 (13%), Positives = 67/251 (26%), Gaps = 28/251 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYF----IHDRESVFLAMQQSYGAIAITSS 57
I+ITR + L ++ G P D L + I +SS
Sbjct: 12 NIIITRSKEGILDIKKIFTSKGANIYEFPAISIGDPDDLDPLDEALNQINDFHWIIFSSS 71
Query: 58 ESLSTLPANFC----------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + + T I +GE +A G F +A+ ++
Sbjct: 72 NGIKFVDKRLRYFQSSLKECSKKTKIAVVGEKTAQTLDDFGIKADFIPP---EYVAESLI 128
Query: 108 EQKVLFTPQKPLIYLGGKPRNFH-FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ + + + D + + + Y ++ +++ N
Sbjct: 129 DNFPISGYGLRVFLPRVQTGGRDLIADQFRKAGSRVFEVAAYETRCPDSIPEETIDIIVN 188
Query: 167 ADA--ILFYARSSV--------LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+F + +V F L FL + + V + A
Sbjct: 189 RKVDAFIFSSGKTVSNSAVLLEKAFGKEWLKYLDQTRFLTIGPQTTKICKKIFGRVDSQA 248
Query: 217 CFPKETSLLKL 227
LL +
Sbjct: 249 QKYTFDGLLDV 259
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 28/121 (23%), Gaps = 9/121 (7%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI--DCYYSQDIAYPETTMKNLLQNADAILF 172
Q+ +I K + + D P N + + I+F
Sbjct: 9 DQRNIIITRSKEGILDIKKIFTSKGANIYEFPAISIGDPDDLDPLDEALNQINDFHWIIF 68
Query: 173 YARSS-------VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ + + YF S + A + + SL+
Sbjct: 69 SSSNGIKFVDKRLRYFQSSLKECSKKTKIAVVGEKTAQTLDDFGIKADFIPPEYVAESLI 128
Query: 226 K 226
Sbjct: 129 D 129
>gi|282900333|ref|ZP_06308284.1| hypothetical protein CRC_02209 [Cylindrospermopsis raciborskii
CS-505]
gi|281194838|gb|EFA69784.1| hypothetical protein CRC_02209 [Cylindrospermopsis raciborskii
CS-505]
Length = 247
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 59/247 (23%), Gaps = 29/247 (11%)
Query: 15 TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSSESLSTLPANFCRH 70
+ + +G + +P L ++ + TS+ +
Sbjct: 1 MSQGLTSLGARVIELPALEIGPPSSWRSLDQSILELSTFDWLVFTSTNGVEYFFERMALQ 60
Query: 71 TPIFAIGEASA-----------CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
A A+ QI +A +V K +
Sbjct: 61 YKNQQALIRQAISRIKIAVVGEKTAQSLKIHQIEPDFIPPDFIADSLVNNFPENLAGKKI 120
Query: 120 IYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYARS 176
++ L + + + Y S TT + L N D I F +
Sbjct: 121 LFPRVESGGREILVKELTQKGAQVVEVPAYESLCPQSIPTTAQQALINQSVDVITFASSK 180
Query: 177 SVLYFFSLPLP--------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+V +F L A + + V L+K +
Sbjct: 181 TVKFFCVLLENNLPQEIEHYLKKTAIASIGPQTSKTCIDLLGRVDITTQQYTIDGLIKAI 240
Query: 229 ---PLRR 232
LRR
Sbjct: 241 VEWSLRR 247
>gi|73540407|ref|YP_294927.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Ralstonia eutropha JMP134]
gi|72117820|gb|AAZ60083.1| Uroporphyrinogen III synthase HEM4:Protein of unknown function
DUF513, hemX [Ralstonia eutropha JMP134]
Length = 689
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 72/272 (26%), Gaps = 48/272 (17%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+V+TRP ++ + E +Q G + PL + LA + + S
Sbjct: 6 VVVTRPAGQSRQLTEALQAAGLDVLGFPLLSIGPAADDAPLRAALARLDQFALVIFVSPN 65
Query: 59 SLSTLPA-----------NFCRHTPIFAIGEASACLARQKGFTQIFH------------- 94
++ + P+ +G AS ++G +
Sbjct: 66 AIQYAVDALAVVQGIAAAQWPPGVPVAVVGPASVMALAERGIVAPDYRVIAPAGADGNGT 125
Query: 95 -----GKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
++ + + + + + ++ + G D L E + ++ Y
Sbjct: 126 NGGANCEEARFDSEALWAQLEPAALQGRSVLIVRGNGGRDWLGDRLREAGADVTAVEAYQ 185
Query: 150 SQDIAYPETTMKNLLQN------ADAILFYARSSVLYFFSLPLPA--------KISAAFL 195
+ + A L + +V +L +
Sbjct: 186 RTLPEPTAMQWQAVRDGLSPGAAPQAWLLTSSEAVRNLETLARHNLSPQELATLKQVQCI 245
Query: 196 CLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
IA A + A P + LL
Sbjct: 246 APHARIAEQAQALGFTRILRAA-PGDAGLLAA 276
>gi|304320178|ref|YP_003853821.1| hypothetical protein PB2503_03017 [Parvularcula bermudensis
HTCC2503]
gi|303299081|gb|ADM08680.1| hypothetical protein PB2503_03017 [Parvularcula bermudensis
HTCC2503]
Length = 237
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 75/239 (31%), Gaps = 18/239 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M + +TRP A RT + + PL + A+ TS +
Sbjct: 1 MTVFVTRPEPDATRTVAALASAELKAIPTPLLDIVI--ADAAAPPLAKGEALVFTSRNGV 58
Query: 61 STLPANFCR-HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
A P +A+G A+A A + G T G + L +++
Sbjct: 59 RAWSATGGALTAPAYAVGTATAEAASEIGLTVADIGGGDVDTLLPVLMAAPATG-----F 113
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL------QNADAILFY 173
+++ G+ + L P R I Y ++ + + L I +
Sbjct: 114 LHIRGRHSRGQLVERLAATGRPARGIPLYEAKAATVLPAPLLDALRAGETPHGPCRIALF 173
Query: 174 ARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + L + CLS +A+A+ V +A P + + L
Sbjct: 174 SPRTATILLRLLDDCLGRISVPAQIFCLSPAVAAALDKDRFAQVVIASEPTLPAFIDSL 232
>gi|195400985|ref|XP_002059096.1| GJ15178 [Drosophila virilis]
gi|194141748|gb|EDW58165.1| GJ15178 [Drosophila virilis]
Length = 337
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 75/231 (32%), Gaps = 19/231 (8%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIAITSSESLSTLPANF----- 67
E + + P+ +P F + Y I TS + +
Sbjct: 90 AETLLGHNFQPLFVPTLSFGYKNLEQLRNKLRTPDKYAGIIFTSPRCVEAVGEALQLGEL 149
Query: 68 ---CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTPQKPLIYL 122
+ +A+GE + LA HGK N+ NLA IV+ PL+
Sbjct: 150 PGGWKLLHNYAVGEVTHNLAMSMLQQLFTHGKQTGNARNLADFIVDTFDGSRNL-PLLLP 208
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLY 180
G L+E+ + + Y ++ M+ L+ + + F++ S V
Sbjct: 209 CGNLATDTLLSKLVENGFCVDACEVYETKCNPQLAECMERALKAENIEFLAFFSPSGVNC 268
Query: 181 FFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ I + + + A+ + V A P L+K+L
Sbjct: 269 AYEYFKAHNIVPDQWKLVAIGPSTRRALESLGLKVFCTAERPTVEHLVKVL 319
>gi|124008146|ref|ZP_01692844.1| uroporphyrinogen-III synthase [Microscilla marina ATCC 23134]
gi|123986394|gb|EAY26207.1| uroporphyrinogen-III synthase [Microscilla marina ATCC 23134]
Length = 265
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 68/243 (27%), Gaps = 25/243 (10%)
Query: 3 IVITRPIKKALR-----TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAI 54
I++++P + EK G P + F ++ A+
Sbjct: 22 ILVSQPKPSNDKSPYFKLAEK---YGIKVDFRPFIDVVPVSVKEFRKQKVDILAHSAVIF 78
Query: 55 TSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++++ F + +A ++ + ++
Sbjct: 79 TSRKAVTLFFEMCKNMKIEVPADMKYFCVSSQTANYLQKYIVVRKRKIFTGLKTAKDLLE 138
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
V + ++ R ++L ++ + Y + + N
Sbjct: 139 --IVKKHKGEKYLFPCSDIRKDDIPNFLTKNDYNFTEVVLYRTVASDLSD----LSDVNY 192
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D I F++ S + F+ K + A A+ + + A P S+
Sbjct: 193 DVIAFFSPSGIQSLFANFPDFKQNKTRIAAFGPTTAKAVRDAGLVLDIEAPMPNAPSMTG 252
Query: 227 LLP 229
+
Sbjct: 253 AIE 255
>gi|148237012|ref|NP_001088826.1| hypothetical protein LOC496102 [Xenopus laevis]
gi|56269261|gb|AAH87535.1| LOC496102 protein [Xenopus laevis]
Length = 237
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 73/238 (30%), Gaps = 25/238 (10%)
Query: 1 MYIVITR-PIKK---ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS---YGAIA 53
M +++ + P + +++ G ++P+ F +F Y +
Sbjct: 1 MKVLLLKDPKTADLASDPYVKELSLRGLQATLIPVLSFKFVSLDLFFDKLSHPESYAGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
TS ++ + + I + G + G N+ LA I
Sbjct: 61 FTSPRAVEAVKLCLQKPDNIKVE---------EIGLSSEGEGSGNAEKLADCIC--SKGL 109
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--- 170
+ P+++ G + L E +PL I Y + + ++ +
Sbjct: 110 SYAAPILFPCGSLKREVLPKKLHEKNVPLETITVYQTSPHPAIQDSLMDYYTKKGVPASI 169
Query: 171 LFYARSSVL----YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+F++ S V + LP F + A A+ V A P L
Sbjct: 170 VFFSPSGVKYCLKFLKDLPSDQLNQIKFAAIGPTTAEAMAEEGIPVSCTAQNPTPQDL 227
>gi|126666606|ref|ZP_01737584.1| Uroporphyrinogen-III synthase [Marinobacter sp. ELB17]
gi|126628994|gb|EAZ99613.1| Uroporphyrinogen-III synthase [Marinobacter sp. ELB17]
Length = 268
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 64/245 (26%), Gaps = 16/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
I+I RP +A R Q G +PL S + + I S
Sbjct: 17 RILICRPQPEADRLAIAFQAAGAQAECLPLIDRAPLALSAEHQAHIQNLDLFQHIVAVSP 76
Query: 58 ESLSTLPANFCRHTP------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ L P + A + ++ +
Sbjct: 77 YAARQLLEQVDAWWPQLPVGIHWYGVGAGTAAELSRCGITARRPAQGW-TSEALLALPPL 135
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADA 169
+ ++ G + L + + V+ Y Y + + L N DA
Sbjct: 136 QNLANQRVLLARGGDGRDLLRNTLRQRGAQITVLPLYRRFCPQYSAAQLAHALDGFNPDA 195
Query: 170 ILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
++ + ++ +L + + +A + V + +++
Sbjct: 196 VITLSGETLKNLVALCAKNDHNLYRKLLIVPVERVAEQAQTAGFINPHVPAGLTDNNIVA 255
Query: 227 LLPLR 231
+ R
Sbjct: 256 SVTAR 260
>gi|52842940|ref|YP_096739.1| uroporphyrinogen III methylase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630051|gb|AAU28792.1| uroporphyrinogen III methylase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 250
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 76/240 (31%), Gaps = 16/240 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I+ TRP ++A +KI + G IP+ P + + L S S+ +
Sbjct: 9 RILNTRPREQAQVLNKKIIESGGIPIDCPTMEIMASETNWINNLPDLTSVNQAIFVSTNA 68
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ-----KGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + + F + ++ +
Sbjct: 69 VRYFMMELASKNINWPNSIRVTAIGKGTSRVLNEFNIQVSDVPELPDSEHLLTLNSLQQI 128
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILF 172
+ ++ + G+ E+YL+ L ++ Y A + + +L ++ D IL
Sbjct: 129 RNQTILLVKGEGGRQLIEEYLMLKGAKLCLLSVYKRVMPAIDQEFINSLWRDDLVDIILL 188
Query: 173 YARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+ F + + L +S+ +A + ++ ++ L
Sbjct: 189 TSEQSIHNLFKMFSIEGQMWLQNKPCLVISDRLAKVASLFGIKKILIS---HPERMIGAL 245
>gi|15893394|ref|NP_346743.1| uroporphyrinogen III syntase [Clostridium acetobutylicum ATCC 824]
gi|15022922|gb|AAK78083.1|AE007522_7 Uroporphyrinogen III syntase [Clostridium acetobutylicum ATCC 824]
gi|325507506|gb|ADZ19142.1| Uroporphyrinogen III syntase [Clostridium acetobutylicum EA 2018]
Length = 490
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 71/234 (30%), Gaps = 13/234 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITR ++ +E++ +G + + ++ + Y I +TS +
Sbjct: 254 NICITRSKNQSKTMREELLDLGAEVTEVHSIEIENTASNLEEYINKISEYDYIILTSVNA 313
Query: 60 LSTLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLF 113
+ L + A ++ + + N + E +
Sbjct: 314 VEVLFDYLASKDYDVRKVRAKFAVIGNATKEALKKRGIVPEIVSRKHNGEGLFDEIRGYL 373
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ + + ++ L+ + + Y + + K +NAD I+F
Sbjct: 374 KKDDKIFIPRSENSRKYIKEQLVSLGLSVDECFIYRTVPGKLYD---KAAFENADTIVFT 430
Query: 174 ARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ S+V +L I + + + T + ++++
Sbjct: 431 SPSTVKNMIALFGEKNIKKKSIIAIGPITGRELGKINAEYSTCSEC-SVDAIIR 483
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 15/151 (9%), Positives = 40/151 (26%), Gaps = 5/151 (3%)
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
+ + + + + + + K ++ + L++
Sbjct: 217 EKCDNANMTSPCIIVVGKVVGFNQQLNWYEKKPLFGRNICITRSKNQSKTMREELLDLGA 276
Query: 141 PLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLP-----AKISAAFL 195
+ + ++ A N + D I+ + ++V F K+ A F
Sbjct: 277 EVTEVHSIEIENTASNLEEYINKISEYDYIILTSVNAVEVLFDYLASKDYDVRKVRAKFA 336
Query: 196 CLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ N A+ V+ L
Sbjct: 337 VIGNATKEALKKRGIVPEIVSRKHNGEGLFD 367
>gi|317968065|ref|ZP_07969455.1| putative uroporphyrinogen III synthase [Synechococcus sp. CB0205]
Length = 261
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 73/256 (28%), Gaps = 30/256 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
I +TR ++ ++ ++ G + +P E LA + + + ++SS
Sbjct: 8 IAVTRAEQQLGTARQLFEQAGASVLDLPALVIGPPDEWGPLDDALAELEEFHWLIVSSSN 67
Query: 59 SLSTLPANFCRHT----------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + R I A+G +A + G F +A ++E
Sbjct: 68 GVDAVEQRLQRQGSSLARRPSSLKIAAVGRKTAARLDELGAAADFVPP---AFVADSLIE 124
Query: 109 QKVLFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-- 165
+ L+ + E + + Y S+ L
Sbjct: 125 HFPVSGWGLRLLLPRVQSGGRTLLAEAFGEAGARVVEVAAYESRCPETLPAATATALAEG 184
Query: 166 NADAILFYARSSVLY--------FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
DAI F + +V + F + + + + A V A
Sbjct: 185 RVDAITFSSGKTVQHTIQLLEQQFGENWREPLEQVRLISIGPQTSKTLQALLGRVDAEAN 244
Query: 218 FPKETSLLK--LLPLR 231
L+ L L+
Sbjct: 245 PHDLDGLVAACALALK 260
>gi|313608616|gb|EFR84477.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL F2-208]
Length = 240
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 75/234 (32%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + G+ V +PL + S+ + + +TS+ ++
Sbjct: 4 KVVLTREASKNQPWQTYFAQKGFAVVSIPLIKTRPKKISLSREQLE-AEWLFLTSANAVE 62
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
N H I IGE + + G+ F + E + +
Sbjct: 63 YFFMNQPGEAHYKIAVIGEKTREKLAEYGYNPSFVPSIYQS--EMFLEEWLNENPEKTSV 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSS 177
+ +D L E + ++ Y + + + LL + I+F + S+
Sbjct: 121 LLPQSNLSRSIIKDTLTEKGYLVHSVELYETVFPENSKIKLAELLNSNDTHIIIFASPSA 180
Query: 178 VLYFFSLPLP---AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S+ K + + AI A V L L+
Sbjct: 181 WKNFYSIAKSLPVQKEKWHIASIGSITTEAILADGWEVKYQPKTFTMKHLTDLI 234
>gi|94311680|ref|YP_584890.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Cupriavidus metallidurans CH34]
gi|93355532|gb|ABF09621.1| putative bifunctional protein (uroporphyrinogen-III synthase
transmembrane protein and Uroporphyrin-III
C-methyltransferase) [Cupriavidus metallidurans CH34]
Length = 693
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/271 (11%), Positives = 63/271 (23%), Gaps = 47/271 (17%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+V+TRP ++ + E +Q G + PL + L + Y + S
Sbjct: 6 VVVTRPAGQSRQLTEALQAAGLDVLSFPLLAIGPAADDVPLRAELGRIEDYALVVFVSPN 65
Query: 59 SLSTLPANFCRHTPIF--------------------------AIGEASACLARQKGFTQI 92
++S + A +A
Sbjct: 66 AVSYGLDTLAQVQNAPGGARWPESVPVAVVGPSSVVALAERGITPPAYRVIAPAGAQGND 125
Query: 93 FHGKDNSINLAKIIVEQKVLFTPQ--KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
G + + E + ++ + G D L + + ++ Y
Sbjct: 126 TAGDAARFDSEALWSELDTSPGAFAGRKVLIIRGSGGREWLADRLRDAGASVEAVEAYSR 185
Query: 151 QDIAYPETTMKN------LLQNADAILFYARSSVLYF-----FSLPLPAKISAA---FLC 196
+ A L + +V L +
Sbjct: 186 TLPEPSGMQWQAVRDSLKPDAPPYAWLLTSSEAVRNLDGLARLHLSPQEHERLKQMQCIA 245
Query: 197 LSNNIASAIPASYKNVVTVACFPKETSLLKL 227
IA+ + V A P + LL
Sbjct: 246 PHARIAAQAQSLGFAHVLPAA-PGDAGLLAA 275
>gi|71737073|ref|YP_272378.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557626|gb|AAZ36837.1| uroporphyrinogen-III synthetase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 257
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 24/229 (10%), Positives = 69/229 (30%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALAKVLAEAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNAD 168
+ P ++ + G + L + + + Y + + + ++ +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLRALGVGVDYLPLYRRYLPEHAPDAVPQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
++ + + L P S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIAQAAGARTVI 233
>gi|54295574|ref|YP_127989.1| uroporphyrinogen-III synthetase [Legionella pneumophila str. Lens]
gi|53755406|emb|CAH16902.1| Uroporphyrinogen-III synthetase [Legionella pneumophila str. Lens]
Length = 250
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 76/240 (31%), Gaps = 16/240 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I+ TRP ++A +KI + G IP+ P + + L S S +
Sbjct: 9 RILNTRPREQAEVLNKKIIESGGIPIDCPTMEIVASETNWINKLPDLTSVNQAIFVSGNA 68
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ-----KGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + A + + F + ++ +
Sbjct: 69 VRYFMMELASKRINWPNSIRVAAIGKGTSRVLNEFNIQVRDVPELPDSEHLLTLNSLQQI 128
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILF 172
+ ++ + G+ E+YL+ L ++ Y A + + +L ++ D IL
Sbjct: 129 RNQTILLVKGEGGRQLIEEYLMLKGAKLCILSVYKRVMPAIDQEFLNSLWRDDLADIILL 188
Query: 173 YARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+ F + + L +S+ +A + ++ ++ L
Sbjct: 189 TSEQSIHNLFKMFSIEGQMWLQNKPCLVISDRLAKVASLFGIKKILIS---HPERMIGTL 245
>gi|78213861|ref|YP_382640.1| uroporphyrinogen-III synthase [Synechococcus sp. CC9605]
gi|78198320|gb|ABB36085.1| Uroporphyrinogen-III synthase [Synechococcus sp. CC9605]
Length = 265
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 59/247 (23%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR + ++ +++ G + +P L S+ + +S+
Sbjct: 10 VVVTRAADQQGAARQLLEQQGATVLDLPALVIGPPDHWGPLDDALEDLDSFHWLVFSSAN 69
Query: 59 SLSTLPANFCRHTPIFAIGEAS--------ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + R A AS S +I
Sbjct: 70 GVQAVEQRLQRLGRCLARRPASLKIAAVGRKTAQMLDDLGASADFVPPSFVADSLIDHFP 129
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NAD 168
V K L+ D E + + + Y S L D
Sbjct: 130 VSGWGLKMLLPRVQSGGRTLLADAFGEAGVRVVEVAAYESCCPVAMPEPTATALDEGKVD 189
Query: 169 AILFYARSSVLYFFSLPLP--------AKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
AI F + + + L + + + + + V A
Sbjct: 190 AIAFSSGKTAQHTAKLLEQRFGAGWAERLEGVKVVSIGPQTSRSCRQCFGRVDAEADPHD 249
Query: 221 ETSLLKL 227
L
Sbjct: 250 LEGLADA 256
>gi|307611614|emb|CBX01298.1| uroporphyrinogen-III synthetase [Legionella pneumophila 130b]
Length = 250
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 76/240 (31%), Gaps = 16/240 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I+ TRP ++A +KI + G IP+ P + + L S S +
Sbjct: 9 RILNTRPREQAEVLNKKIIESGGIPIDCPTMEIVASETNWINKLPDLTSVNQAIFVSGNA 68
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ-----KGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + A + + F + ++ +
Sbjct: 69 VRYFMMELASKRINWPNSIRVAAIGKGTSRVLNEFNIQVRDVPELPDSEHLLTLNSLQQI 128
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILF 172
+ ++ + G+ E+YL+ L ++ Y A + + +L ++ D IL
Sbjct: 129 RNQTILLVKGEGGRQLIEEYLMLKGAKLCLLSVYKRVMPAIDQEFLNSLWRDDLADIILL 188
Query: 173 YARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+ F + + L +S+ +A + ++ ++ L
Sbjct: 189 TSEQSIHNLFKMFSIEGQMWLQNKPCLVISDRLAKVASLFGIKKILIS---HPERMIGTL 245
>gi|307108263|gb|EFN56503.1| hypothetical protein CHLNCDRAFT_34953 [Chlorella variabilis]
Length = 343
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/232 (12%), Positives = 67/232 (28%), Gaps = 12/232 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-----MQQSYGAIAITSS 57
+V+TR K + + ++ G + +P+ + L + + ITS
Sbjct: 93 VVLTREQGKNGKLRRVLEGRGIACLELPMVETAAGPDRHLLPKVLAEQAAHFDWVCITSP 152
Query: 58 ESLSTLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAKIIVEQKV 111
E+ S + + +GE + + + N E
Sbjct: 153 EAASVFLEGWRAAGRPPVRLAVVGEGTGRVFEAAAADGAPQPEFVPSVANAEHFGPELPF 212
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
L K ++Y + + L + ++ Y + + + + A +
Sbjct: 213 LEGGTKRVLYPASNKASSELQSGLAARGFDVVRLNTYDTVPVTRLDERQLAAARRAAVVT 272
Query: 172 FYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ S++ + + + C+ + A A V P
Sbjct: 273 VGSPSAIKAWVQIVGEEATHGMSIACIGSTSARAAEKLGLQAVKYPEQPGVD 324
>gi|18310416|ref|NP_562350.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens str. 13]
gi|18145096|dbj|BAB81140.1| uroporphyrinogen III methylase [Clostridium perfringens str. 13]
Length = 492
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 65/219 (29%), Gaps = 12/219 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR +++ + K++++G + E++ + + Y I TS +
Sbjct: 252 NICLTRSKEQSKEIKWKLKELGAEVTEINSIKIKKTAENLDEYINTLEKYDHIVFTSVNA 311
Query: 60 LSTLPANFCRH----TPIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIVEQKVLFT 114
++ ++ I A ++ ++ A+ + E
Sbjct: 312 VNVFFDYLVKNRVDIRKIKADFAVLGKATKKALISRGIVPSIMAHSFTAEGLFEVLKDNI 371
Query: 115 PQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ + D L ++ Y + + D +L+
Sbjct: 372 KEGEEVLIPCSSLSREYLFDNLASLGAKCHRVNIYDTVCGDVKNPRA---FKEVDMVLYT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKN 211
+ S+V + + + + A+ S
Sbjct: 429 SPSTVKNMIDMIGLEALKEKVSIAIGPITLKALNESGIE 467
>gi|313633725|gb|EFS00473.1| porphyrin biosynthesis protein HemD [Listeria seeligeri FSL N1-067]
Length = 493
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 76/244 (31%), Gaps = 21/244 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R K E I+ +G M P + + Y + TS E++
Sbjct: 252 KVLLPRARKGKSMLAENIRDLGGEVTMYPNIQVLDIAPTKTAGQLAEYQELLFTSKEAVE 311
Query: 62 TLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++T + AIG+ + +KG K S ++I+E
Sbjct: 312 RFFNYLASINLDVRSLKNTHLTAIGKQTKEAFTEKGIIPDSFIKRRSQ---ELILEHAPR 368
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
F + + +G + L ++ + Y + + L+ D I F
Sbjct: 369 FKDNQSSLIIGSVLDTAEVQTMLAGI-ETVQTMPLYDMRPVTERP----FDLECFDQICF 423
Query: 173 YARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +V ++ L + ++ + + A S ++L+
Sbjct: 424 SSSRAVHNLLAVLNTEEKALLQQKTILSIGRFTSATLASFGFTNYYEAENATPESFIELI 483
Query: 229 PLRR 232
+
Sbjct: 484 QKTK 487
>gi|28867369|ref|NP_789988.1| uroporphyrinogen-III synthetase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28850603|gb|AAO53683.1| uroporphyrinogen-III synthetase [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 258
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 66/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L ++
Sbjct: 65 PAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLDHPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNAD 168
+ P ++ + G + L E + + + Y + T+ ++ +
Sbjct: 125 AIAVPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVT 214
++ + + L + S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLAGLPLFVPSPRVASLAQAAGARNVI 233
>gi|260435290|ref|ZP_05789260.1| uroporphyrinogen-III synthase [Synechococcus sp. WH 8109]
gi|260413164|gb|EEX06460.1| uroporphyrinogen-III synthase [Synechococcus sp. WH 8109]
Length = 265
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 63/247 (25%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR + ++ +++ G + +P L +S+ + +S+
Sbjct: 10 VVVTRAADQQGAARQLLEQRGATVLDLPALVIGPPDHWGPLDDALEDLESFHWLVFSSAN 69
Query: 59 SLSTLPANFCRHTPIFAIGEAS--------ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + R A AS S +I
Sbjct: 70 GVQAVEQRLQRLGRCLARRPASLKIAAVGRKTAQVLDDLGAAADFVPPSFVADSLIDHFP 129
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NAD 168
V K L+ D E + + + Y S A L+ D
Sbjct: 130 VSGWGLKMLLPRVQSGGRTLLADAFGEAGVRVVEVAAYESGCPATMPEPTATALEEGEVD 189
Query: 169 AILFYARSSVLYFFSLPLP--------AKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
AI F + + + L + + + + + V A
Sbjct: 190 AIAFSSGKTAEHTAQLLEQRFGPGWAERLEGVKVVSIGPQTSRSCRQCFGRVDAEADPHD 249
Query: 221 ETSLLKL 227
L +
Sbjct: 250 LEGLAEA 256
>gi|328475223|gb|EGF46004.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes 220]
Length = 493
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 21/240 (8%), Positives = 70/240 (29%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVVDVVPTKTKEELSEVSELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + ++ + + ++ + + +
Sbjct: 312 RFFDYLAQLDLDIRSLKNTHLTSIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQK 371
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ G + + ++ + ++ Y + + L + + + F +
Sbjct: 372 NVSNLIIGSIVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSSR 427
Query: 177 SVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
SV + + + L + ++ + + N A SL++L+ +
Sbjct: 428 SVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINNFIEAESATPESLIELIQKTK 487
>gi|331018513|gb|EGH98569.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 258
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 66/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L ++
Sbjct: 65 PAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLDHPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNAD 168
+ P ++ + G + L E + + + Y + T+ ++ +
Sbjct: 125 AIALPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVT 214
++ + + L + S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLAGLPLFVPSPRVASLAQAAGARNVI 233
>gi|171463845|ref|YP_001797958.1| Uroporphyrinogen III synthase HEM4 [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193383|gb|ACB44344.1| Uroporphyrinogen III synthase HEM4 [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 274
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 85/262 (32%), Gaps = 39/262 (14%)
Query: 3 IVITRPIKKALRTQE----KIQKMGY------IPVMMPLSYFIHDRE----SVFLAMQQS 48
I++TRP +A + E I+K G + +PL + + +
Sbjct: 6 IIVTRPSGQARQLIEVLTNAIEKSGVAKRSLPEILSLPLLTIVPKSDEHLADHIATVLGD 65
Query: 49 YGAIAITSSESLSTLPANFCRHT--------PIFAIGEASACLARQKGF------TQIFH 94
+ S ++ ++ R PI +G +S + G T I
Sbjct: 66 ADLVIFVSPNAIESVMRLLERDWQDFSKSIIPIGVMGGSSHQALKNHGIGLEESPTPIII 125
Query: 95 GKDNSINLAKIIVEQ---KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
K+N ++ + ++ K ++ G+ D L + I Y
Sbjct: 126 PKNNENWDSEGLWQELGSFDWNWQNKKVVIFKGEGGRDWLADALKNAGATVEAISTYSRI 185
Query: 152 DIAYPETT---MKNLLQNADAILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASA 204
+ + ++ + + L + +V Y + I + LC +NIA A
Sbjct: 186 PLDLDNPSWHAIRQMDMSKSLWLLTSSEAVRYLGEVMKDQFIQSLKTASALCPHHNIADA 245
Query: 205 IPASYKNVVTVACFPKETSLLK 226
V + P + +L+K
Sbjct: 246 AELIGFGEVFTSE-PGDEALVK 266
>gi|58865710|ref|NP_001012068.1| uroporphyrinogen-III synthase [Rattus norvegicus]
gi|53734252|gb|AAH83730.1| Uroporphyrinogen III synthase [Rattus norvegicus]
gi|149061332|gb|EDM11755.1| rCG47444, isoform CRA_a [Rattus norvegicus]
gi|149061333|gb|EDM11756.1| rCG47444, isoform CRA_a [Rattus norvegicus]
gi|149061334|gb|EDM11757.1| rCG47444, isoform CRA_a [Rattus norvegicus]
gi|149061335|gb|EDM11758.1| rCG47444, isoform CRA_a [Rattus norvegicus]
Length = 265
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 88/260 (33%), Gaps = 33/260 (12%)
Query: 1 MYIVITRPIKK----ALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIA 53
M +++ + K ++++ G ++P+ F L+ + +G +
Sbjct: 1 MKVLLLKDAKDDDSGQDPYIQELRLCGLEATLIPVLSFEFMSLPSLSEKLSHPEGFGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEA----------------SACLARQKGFTQIFHGKD 97
TS ++ + + A ++ +A L + G G
Sbjct: 61 FTSPRAVEAVKLCLEKDNKTEAWEKSLKDRWNAKSVYVVGSATASLVNKIGLDAEGAGSG 120
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
N+ LA+ I + P L++ G + L + IP+ + Y + +
Sbjct: 121 NAEKLAEYICSKPSSELP---LLFPCGTIKGDTLPKMLRDKGIPMESMHVYQTIPHPGIQ 177
Query: 158 TTMKNLLQNADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYK 210
++++ +N F++ S S+ Y +L + F+ + + A+ A
Sbjct: 178 GSLESYYENQGIPASITFFSPSGLKYSLEYIQALSGGSFDQIKFVAIGPSTTRAMAAKGL 237
Query: 211 NVVTVACFPKETSLLKLLPL 230
V A P +L +
Sbjct: 238 PVSCTAESPTPQALAAGIRK 257
>gi|238760185|ref|ZP_04621332.1| Uroporphyrinogen-III synthase [Yersinia aldovae ATCC 35236]
gi|238701621|gb|EEP94191.1| Uroporphyrinogen-III synthase [Yersinia aldovae ATCC 35236]
Length = 219
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 25/216 (11%), Positives = 58/216 (26%), Gaps = 17/216 (7%)
Query: 31 LSYFIHDRESVFLAMQ----QSYGAIAITSSESLSTLPANFCRHTPIFAIG------EAS 80
+ F + L Q+ + S ++ R+ + +
Sbjct: 1 MIDFSPGDDLPKLPTLLHDMQAGDLVFALSQNAIRYANPLLKRNNLSWPAQLSYYAIGRT 60
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
L ++ + K + L G + L E
Sbjct: 61 TALTLHTASRLHVTFPPTGETSEMLLSLPDLQQLTGKKALLLRGNGGRELLGESLAERGA 120
Query: 141 PLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYARSSVLYFFSLPLP-----AKISAA 193
+ +CY I Y + Q D ++ + + ++L +
Sbjct: 121 SVTFCECYQRSPIYYDGSEQSAHWQRAGVDMLVITSGEMLQQIYTLVPDYYRSSWLLRCR 180
Query: 194 FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ +S+ IA+ + + VA +L++ L
Sbjct: 181 LIVVSDRIATLAAQMGWSDIRVAENADNDALIRALQ 216
>gi|289742307|gb|ADD19901.1| uroporphyrinogen III synthase UROS/HEM4 [Glossina morsitans
morsitans]
Length = 270
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 82/245 (33%), Gaps = 20/245 (8%)
Query: 3 IVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSSE 58
++I + ++ E++ + + P+ +P F D+ + L Y + TS
Sbjct: 7 VIIFKSESESTDVYAEELHRHYFNPIFVPTLSFGFKNLDKLNAKLQHPDDYSGLIFTSPR 66
Query: 59 SLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQIFHGKDNS--INLAKIIVE 108
+ + + +A+GE + LA HGK +LA+ I+E
Sbjct: 67 CVEAVCKALKNNELPGAWKMLHNYAVGEVTHNLAMSDLQQLFTHGKQTGTARSLAEFIIE 126
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
P + L E + + Y ++ A M L + +
Sbjct: 127 TFDG-GKDLPFLLPCSNLAQDTLNLKLHEAGFRVDACEVYETKCSADLAEHMARALSSEN 185
Query: 169 A--ILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F++ S V + I + + + + A+ + V A P
Sbjct: 186 IEYMAFFSPSGVNCTYEYFKANNILLDNYRLVAIGPSTRRALESKNLKVHCTAERPTVEH 245
Query: 224 LLKLL 228
L+K+L
Sbjct: 246 LIKVL 250
>gi|47092001|ref|ZP_00229795.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes str. 4b H7858]
gi|47019717|gb|EAL10456.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes str. 4b H7858]
Length = 493
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 21/240 (8%), Positives = 71/240 (29%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVVDVVPTKTKEELREVSGLLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + ++ + + ++ + + +
Sbjct: 312 RFFDYLAQLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQK 371
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ G + + ++ + ++ Y + + L + + + F +
Sbjct: 372 NVSNLIIGSIVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSSR 427
Query: 177 SVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
SV + + + L + ++ + + N A SL++L+ +
Sbjct: 428 SVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINNFIEAESATPESLIELIQKTK 487
>gi|254932921|ref|ZP_05266280.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes HPB2262]
gi|293584476|gb|EFF96508.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes HPB2262]
gi|332311586|gb|EGJ24681.1| Uroporphyrinogen III synthase/methyltransferase [Listeria
monocytogenes str. Scott A]
Length = 493
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 21/240 (8%), Positives = 70/240 (29%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVVDVVPTKTKEELSEVSELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + ++ + + ++ + + +
Sbjct: 312 RFFDYLAQLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQK 371
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ G + + ++ + ++ Y + + L + + + F +
Sbjct: 372 NVSNLIIGSIVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSSR 427
Query: 177 SVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
SV + + + L + ++ + + N A SL++L+ +
Sbjct: 428 SVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINNFIEAESATPESLIELIQKTK 487
>gi|89900505|ref|YP_522976.1| uroporphyrinogen III synthase [Rhodoferax ferrireducens T118]
gi|89345242|gb|ABD69445.1| uroporphyrinogen-III synthase [Rhodoferax ferrireducens T118]
Length = 273
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/265 (12%), Positives = 76/265 (28%), Gaps = 39/265 (14%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
M +++TRP ++A + + G V +PL ++ + Y + S
Sbjct: 1 MRVIVTRPQREAQQWVLDLSAQGLQAVALPLIEVGPVHDTADVVRAWQHLGDYVGVMFVS 60
Query: 57 SESLSTLPANFCRHTPI-----------FAIGEASACLARQKGFTQIFHGKDNSI----N 101
++ + P+ +A G +A ++G +
Sbjct: 61 GNAVDYFFRSNSALAPVFIGSIATKTRAWATGPGTARALLRQGVAPERLDAPPVDASQLD 120
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPR---------------NFHFEDYLIEHKIPLRVID 146
+ P ++ + G F + +++ +
Sbjct: 121 SEALWQVVGPQVQPGDRVLIVRGGDSLGSAAASSNAAQGAGRDWFANRVMQAGGRPEFVM 180
Query: 147 CYYSQDIAYPE---TTMKNLLQNADAILFYARSSVLYFFS-LPLPAKISAAFLCLSNNIA 202
Y + + + LF + +V+ + LP + A + IA
Sbjct: 181 AYQRGAPEFGSQARELAQQAATDGSVWLFSSTQAVVNLSTCLPGQSWAGARAVATHPRIA 240
Query: 203 SAIPASYKNVVTVACFPKETSLLKL 227
+A + VV + P L+
Sbjct: 241 AAARQAGFGVVQES-RPTLPELVAC 264
>gi|46907420|ref|YP_013809.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes serotype 4b str. F2365]
gi|46880688|gb|AAT03986.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes serotype 4b str. F2365]
Length = 493
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 21/240 (8%), Positives = 70/240 (29%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVVDVVPTKTKEELSEVSELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + ++ + + ++ + + +
Sbjct: 312 RFFDYLAQLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQK 371
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ G + + ++ + ++ Y + + L + + + F +
Sbjct: 372 NVSNLIIGSIVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSSR 427
Query: 177 SVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
SV + + + L + ++ + + N A SL++L+ +
Sbjct: 428 SVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINNFIEAESATPESLIELIQKTK 487
>gi|226223801|ref|YP_002757908.1| uroporphyrinogen-III methyltransferase/uroporphyrinogen-III
synthase [Listeria monocytogenes Clip81459]
gi|225876263|emb|CAS04972.1| Putative uroporphyrinogen-III
methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes serotype 4b str. CLIP 80459]
Length = 493
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 21/240 (8%), Positives = 69/240 (28%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVVDVVPTKTKEELSEVSELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + ++ + + ++ + + +
Sbjct: 312 RFFDYLAQLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQK 371
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ G + ++ + ++ Y + + L + + + F +
Sbjct: 372 NVSNLIIGSIVDTAEVTAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSSR 427
Query: 177 SVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
SV + + + L + ++ + + N A SL++L+ +
Sbjct: 428 SVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINNFIEAESATPESLIELIQKTK 487
>gi|330970392|gb|EGH70458.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 257
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 70/229 (30%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALARVLAEAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P F++G A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPLQPWFSVGSATGQILVDYGLDASWPEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNAD 168
+ P ++ + G + L + + + Y + + ++ +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLRALGVGVDYLPLYRRYLPQHAPGALAQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
++ + + L P S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIARAAGARTVI 233
>gi|313638270|gb|EFS03502.1| porphyrin biosynthesis protein HemD [Listeria seeligeri FSL S4-171]
Length = 493
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 76/244 (31%), Gaps = 21/244 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R K E I+ +G M P + + Y + TS E++
Sbjct: 252 KVLLPRARKGKSMLAENIRDLGGEVTMYPNIQVLDIAPTKTAGQLAEYQELLFTSKEAVE 311
Query: 62 TLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++T + AIG+ + +KG K S ++I+E
Sbjct: 312 RFFNYLASINLDVRSLKNTHLTAIGKQTKEAFTEKGIIPDSFIKRRSQ---ELILEHAPR 368
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
F + + +G + L ++ + Y + + L+ D I F
Sbjct: 369 FKDNQSSLIIGSMLDTAEVQTMLAGI-ETVQTMPLYDMRPVTERP----FDLECFDQICF 423
Query: 173 YARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +V ++ L + ++ + + A S ++L+
Sbjct: 424 SSSRAVHNLLAVLTTEEKALLQQKTILSIGRFTSATLASFGFTNYYEAENATPESFIELI 483
Query: 229 PLRR 232
+
Sbjct: 484 QKTK 487
>gi|313623621|gb|EFR93784.1| uroporphyrinogen-III synthase [Listeria innocua FSL J1-023]
Length = 240
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 77/234 (32%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
IV+TR K Q+ + G+ +PL S+ L Q+ + +TS+ ++
Sbjct: 4 KIVLTREASKNKPWQDYFSQNGFDVESIPLIETHPKNISLSL-KQKEANWLFLTSANAVE 62
Query: 62 TLPANFCR--HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ I IGE + + G+ F + + E T Q +
Sbjct: 63 YFFNEQAGKLNYKIAVIGEKTKEKLAEYGYKPNFVPSVYQSEV--FLSEWLSENTSQTSI 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSS 177
+ ED L ++ + I+ Y + +T + L I+F + S+
Sbjct: 121 LLPQSNLSRTIIEDTLTQNGHLVFPIELYETSFPENSQTILIEQLKLDEKRIIIFASPSA 180
Query: 178 VLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+++ + + N AI A V L L+
Sbjct: 181 WKNFYTIAKQFSIKNENWRIASIGNITTEAILADGWEVTYQPKTFTMKHLADLI 234
>gi|254852928|ref|ZP_05242276.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL R2-503]
gi|300764349|ref|ZP_07074343.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL N1-017]
gi|258606266|gb|EEW18874.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL R2-503]
gi|300515001|gb|EFK42054.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL N1-017]
Length = 493
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 21/240 (8%), Positives = 70/240 (29%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVVDVVPTKTKEELSEVSELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + ++ + + ++ + + +
Sbjct: 312 RFFDYLAQLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQK 371
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ G + + ++ + ++ Y + + L + + + F +
Sbjct: 372 NVSNLIIGSIVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSSR 427
Query: 177 SVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
SV + + + L + ++ + + N A SL++L+ +
Sbjct: 428 SVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINNFIEAESATPESLIELIQKTK 487
>gi|330985680|gb|EGH83783.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 257
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 68/229 (29%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALANVLAEAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L + ++
Sbjct: 65 PAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLGLPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNAD 168
+ P ++ + G + L E + + + Y + + + ++ +
Sbjct: 125 AIAVPGGRVLIMRGDEGRELLAEQLRELGVGVDYLPLYRRYLPQHAPDALPQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
++ + + L P S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIAQAAGARTVI 233
>gi|66043332|ref|YP_233173.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. syringae
B728a]
gi|63254039|gb|AAY35135.1| Uroporphyrinogen-III synthase [Pseudomonas syringae pv. syringae
B728a]
Length = 257
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 70/229 (30%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALARVLAEAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P F++G A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPLQPWFSVGSATGQILVDYGLDASWPEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNAD 168
+ P ++ + G + L + + + Y + + ++ +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLRALGVGVDYLPLYRRYLPQHAPGALAQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
++ + + L P S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIARAAGARTVI 233
>gi|299066046|emb|CBJ37227.1| Probable bifunctional: uroporphyrin-III c-methyltransferase and
uroporphyrinogen-III synthase transmembrane protein
[Ralstonia solanacearum CMR15]
Length = 698
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/253 (13%), Positives = 66/253 (26%), Gaps = 30/253 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+++TRP +A +++ G + PL LA Y + S
Sbjct: 24 VIVTRPRAQAPMLVAALERHGLRTLQFPLLDIAPTPNLDDLRAALADPSRYALVVFVSPN 83
Query: 59 SLSTLPANFCRHTPI--------------FAIGEASACLARQKGFTQIFHGKDNSINLAK 104
++ A A+ + H D +
Sbjct: 84 AVQQAFAAMPEGFRWPQDVPAAVVGPASAQALAAHGVAAPTYRVIRPDSHADDARQDSEA 143
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS---QDIAYPETTMK 161
+ V + ++ + G D L E + +R ++ Y A ++
Sbjct: 144 LYARLDVATLSGREVLIVRGNGGREWLADRLREAGVAVRTVEAYRRSVPVPDAAAWAALR 203
Query: 162 NLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVV 213
+L A + + SL A +A I + V
Sbjct: 204 EVLAGRHAWTLTSSEAARNLDSLARASLSAAEVEALHAAPCFAPHARIVEQAQSLGFRDV 263
Query: 214 TVACFPKETSLLK 226
T+ + LL
Sbjct: 264 TLT-GAGDDRLLA 275
>gi|302853876|ref|XP_002958450.1| hypothetical protein VOLCADRAFT_69473 [Volvox carteri f.
nagariensis]
gi|300256178|gb|EFJ40450.1| hypothetical protein VOLCADRAFT_69473 [Volvox carteri f.
nagariensis]
Length = 262
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 81/242 (33%), Gaps = 15/242 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ-----QSYGAIAITS 56
+++TR K + ++ + G+ V +PL + L + Y +A+TS
Sbjct: 11 KVLLTREAGKNDKLRDALTIKGFRCVELPLIEHTDGPDKTLLPGLLATASELYEWVAVTS 70
Query: 57 SESLSTLPANF----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
E+ + + + +G + + RQ G T + + E +
Sbjct: 71 PEAAAVFLEGWEQAGKPRVRVAVVGGGTGEVLRQGGITPDYVPSKALGKVMG--SELPRV 128
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
++Y + +D L + I+ Y + + + AD + +
Sbjct: 129 PGGSGRVLYPASVKASTDLQDSLAAAGFEVHRINTYSTGAVKSVPEDLLREALTADVVTY 188
Query: 173 YARSSVLYFFSLPLP-AKISAAFL--CLSNNIASAIPASYKN-VVTVACFPKETSLLKLL 228
+ S+V + L S F+ C+ + A A ++ V P ++ +
Sbjct: 189 GSPSAVKAWGPLRRQTDMFSTHFINACIGSTSAKACASAGITENVYYPDSPGMEGWVEAV 248
Query: 229 PL 230
Sbjct: 249 ER 250
>gi|327267710|ref|XP_003218642.1| PREDICTED: uroporphyrinogen-III synthase-like [Anolis carolinensis]
Length = 265
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 70/258 (27%), Gaps = 28/258 (10%)
Query: 1 MYIVITR-PIKKA---LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIA 53
M +++ + P + E++ G ++P+ F + Y +
Sbjct: 1 MKVLLLKDPKESENGPDPYIEELGSHGLEATLIPVLAFEFISLQSLFEKLSCPEQYLGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
TS ++ + + K + + +I + +
Sbjct: 61 FTSPRAVEAIKLCLADKSKKEDWKNYLREKWNTKSIYVVGKATAVLVAELGLIPQGENSG 120
Query: 114 TPQK--------------PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
+K PL++ G + L E I L ++ Y + + +
Sbjct: 121 NAEKLSGYICSRESPNSLPLLFPCGSLKRETLPTILREKGIALEILTVYQTTQHPDLQES 180
Query: 160 MKNLLQNADAI---LFYARSSVL----YFFSLPLPAKISAAFLCLSNNIASAIPASYKNV 212
++N F++ S V L F + A A+ +V
Sbjct: 181 LRNYFSQQGVPASITFFSPSGVKYCLKQIMKLSGDLITQIKFAAIGPTTAEALETEGISV 240
Query: 213 VTVACFPKETSLLKLLPL 230
A P L +
Sbjct: 241 SCTATSPTPQDLTTGIRR 258
>gi|298484667|ref|ZP_07002770.1| Uroporphyrinogen-III synthase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160807|gb|EFI01825.1| Uroporphyrinogen-III synthase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320326723|gb|EFW82768.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331303|gb|EFW87246.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881671|gb|EGH15820.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330890196|gb|EGH22857.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. mori str.
301020]
Length = 257
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/229 (10%), Positives = 69/229 (30%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALAKVLAEAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNAD 168
+ P ++ + G + L + + + Y + + + ++ +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLRALGVGVDYLPLYRRYLPQHAPDAVPQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
++ + + L P S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIAQAAGARTVI 233
>gi|21328632|gb|AAM48638.1| uroporphyrinogen-III synthase, putative [uncultured marine
proteobacterium]
Length = 234
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 89/232 (38%), Gaps = 14/232 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIP---VMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
I++TRP +A + + G P + P+ + + + ITS+
Sbjct: 3 NILLTRPHAQARHFADALIAQGVQPDQITIDPIMKIAPVETACD---ISACTGLIITSAN 59
Query: 59 SLSTLPANFCRHT-PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+LS LP P + +G++++ AR G A+ + E +
Sbjct: 60 ALSYLPVALRGSRLPCYCVGDSTSQAARALGLNAYHLADT-----ARDLCEALPTVCQEG 114
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARS 176
PL++L G + +Y +P+ + Y + T ++L +++ IL ++
Sbjct: 115 PLLHLRGTHTTLNMSEYFRSTPLPVENVVVYEQIALPLQAETHESLRRSSPVILPIFSAR 174
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S L L + + LS IA+ + +T A P +++ ++
Sbjct: 175 SAKLLGKLALDWRPHW-AVALSPAIAALCQEAGFGQITTAAQPNRQAMVAVI 225
>gi|50293669|ref|XP_449246.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528559|emb|CAG62220.1| unnamed protein product [Candida glabrata]
Length = 278
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 16/221 (7%)
Query: 25 IPVMMPLSYFIHDRESV-------FLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIG 77
P+ +PL + +++ +Q Y + ITS S+ L +H I
Sbjct: 43 EPIFLPLITHTNVPQNIISRFADRADNLQDDYDFLIITSQRSIECLNLPELKHIRNKLID 102
Query: 78 EASACLARQKG------FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHF 131
+ + + G ++ N K+ + ++L G+ R
Sbjct: 103 KPTYTVGPATSNFLSSLGFTDIRGGIHAGNGMKLASIIDNDYPAGGKALFLVGEIRKDII 162
Query: 132 EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS 191
YL + I Y + +++ K+ L D I+ ++ +
Sbjct: 163 PKYLRPRNFTVDEIIMYKTAELSDSIVWFKSYLDKCDWIVVFSPQGMSDILQYMKQYSKG 222
Query: 192 A---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
A C+ + ++ V+ P SL+ +
Sbjct: 223 ARPFKIACIGPTTCEFLNSNGIEPDLVSPKPDANSLIAAIK 263
>gi|300703402|ref|YP_003745004.1| bifunctional uroporphyrin-III c-methyltransferase and
uroporphyrinogen-III synthase transmembrane protein
[Ralstonia solanacearum CFBP2957]
gi|299071065|emb|CBJ42374.1| Probable bifunctional: uroporphyrin-III c-methyltransferase and
uroporphyrinogen-III synthase transmembrane protein
[Ralstonia solanacearum CFBP2957]
Length = 704
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/255 (15%), Positives = 72/255 (28%), Gaps = 30/255 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+V+TRP +A +++ G + PL LA Y + S
Sbjct: 30 VVVTRPRAQAPMLVAALERHGLRTLQFPLLDIAPTPNLDDLRAALADPSRYALVVFVSPN 89
Query: 59 SLSTLPA------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK-------- 104
++ + + + P+ +G ASA G H A
Sbjct: 90 AVQQAFSAMPEGFRWPQDVPVAVVGPASAQALAAHGVEPPTHSVIRPDTHADDARQDSEA 149
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS---QDIAYPETTMK 161
+ + ++ + G D L E + +R ++ Y A ++
Sbjct: 150 LYARLDPAQLSGREVLIVRGNGGREWLADRLREAGVAVRTVEAYRRSVPVPDAAAWAALR 209
Query: 162 NLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVV 213
+L A + +V SL +A I + V
Sbjct: 210 EVLAGRHAWTLTSSEAVRNLDSLARASLTAAEVDTLHAAPCFAPHARIVEQAQSLGFRDV 269
Query: 214 TVACFPKETSLLKLL 228
T+ + LL L
Sbjct: 270 TLT-GAGDDRLLAGL 283
>gi|123967668|ref|YP_001008526.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. AS9601]
gi|123197778|gb|ABM69419.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. AS9601]
Length = 265
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/248 (10%), Positives = 64/248 (25%), Gaps = 22/248 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I+ITR + L ++ G +P + L + I +SS
Sbjct: 12 NIIITRSKEGILDIKKIFISKGANVFDLPAISIGDPDDLNPLDEALNQINDFHWIIFSSS 71
Query: 58 ESL-------STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ ++ + I ++ I +A+ +++
Sbjct: 72 NGIKFVDKRLRYFNSSLKECSKKTKIAVVGEKTSKTLDDFGIKADFIPPEFVAESLIDNF 131
Query: 111 VLFTPQKPLIYLGGKPRNFHF-EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + + F D + + + Y ++ +++ N
Sbjct: 132 PVSGYGLRVFVPRVQTGGRDFIADQFRKAGSRVFEVAAYETRCPESIPEETIDIISNRKV 191
Query: 170 --ILFYARSSVLYFFSLPLPAKIS--------AAFLCLSNNIASAIPASYKNVVTVACFP 219
I+F + +V+ L L + + + A
Sbjct: 192 DAIIFSSGKTVVNAAFLLEKNLGKKWLEYFDQIKLLTIGPQTTKICNKIFGRFDSQAQKY 251
Query: 220 KETSLLKL 227
LL +
Sbjct: 252 TFEGLLDV 259
Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 29/121 (23%), Gaps = 9/121 (7%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAILF 172
Q+ +I K + I + + D N + + I+F
Sbjct: 9 DQRNIIITRSKEGILDIKKIFISKGANVFDLPAISIGDPDDLNPLDEALNQINDFHWIIF 68
Query: 173 YARSS-------VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ + + YF S + + + + SL+
Sbjct: 69 SSSNGIKFVDKRLRYFNSSLKECSKKTKIAVVGEKTSKTLDDFGIKADFIPPEFVAESLI 128
Query: 226 K 226
Sbjct: 129 D 129
>gi|260220725|emb|CBA28574.1| hypothetical protein Csp_A07840 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 268
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 74/262 (28%), Gaps = 34/262 (12%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITS 56
M ++ITRP +A + + GY +PL +S + + A+ S
Sbjct: 5 MRVIITRPQAEAAPWLKALDAAGYTSWSLPLIDIRPAAQSAHVESAWSRLSDFDAVMFVS 64
Query: 57 SESLSTLPANFCRHTPIFAIGEASA---------------CLARQKGFTQIFHGKDNSIN 101
++ P+F A + + GF +
Sbjct: 65 RNAVHYFFEGKAAVAPVFTAQAAIETRAFVTGPGSYSALQRVGAEPGFVDAPDFHAGQFD 124
Query: 102 LAKIIVEQKVLFTPQKPLIYLG----------GKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ + TP ++ + F +++ + + Y Q
Sbjct: 125 SEALWAVVRSRVTPGYRVLIVRGSTIDEGASDEGSGRDWFALQVMDAGGEVEFVVSYERQ 184
Query: 152 DIAYPETTM---KNLLQNADAILFYARSSVLYFFSL-PLPAKISAAFLCLSNNIASAIPA 207
+ +T+ + + +F + ++ P + A + I A
Sbjct: 185 RPQWDASTIAQAQAAATDGTVWVFSSSEAIRNLQHACPGVSWAQAQAVVTHARIGDAARE 244
Query: 208 SYKNVVTVACFPKETSLLKLLP 229
+ V + P +L+ +
Sbjct: 245 AGFGRVRESK-PLLPALMASIE 265
>gi|168216822|ref|ZP_02642447.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens NCTC 8239]
gi|182381118|gb|EDT78597.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens NCTC 8239]
Length = 492
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 65/219 (29%), Gaps = 12/219 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR +++ + K++++G + E++ + + Y I TS +
Sbjct: 252 NICLTRSKEQSKEIKWKLKELGAEVTEINSIKIKETAENLDEYINTLEKYDHIVFTSVNA 311
Query: 60 LSTLPANFCRH----TPIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIVEQKVLFT 114
++ ++ I A ++ ++ A+ + E
Sbjct: 312 VNVFFDYLVKNRVDIRKIKADFAVLGKATKKALISRGIVPSIMAHSFTAEGLFEVLKDNI 371
Query: 115 PQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ + D L ++ Y + + D +L+
Sbjct: 372 KEGEEVLISCSSLSREYLFDNLAALGAKCHRVNIYDTVCGDVKNPRA---FKEVDMVLYT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKN 211
+ S+V + + + + A+ S
Sbjct: 429 SPSTVKNMIDMIGLEALKEKVSIAIGPITLKALNESGIE 467
>gi|289434447|ref|YP_003464319.1| bifunctional uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289170691|emb|CBH27231.1| bifunctional uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 493
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 66/241 (27%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R K E I+ +G M P + + Y + TS E++
Sbjct: 252 KVLLPRARKGKSMLAENIRDLGGEVTMYPNIQVLDIAPTKTAGQLAEYQELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + I ++I+E F
Sbjct: 312 RFFNYLASINLDVRSLKNTYLTAIGKQTKEAFTEKGIIPDSFIKRRSQELILEHAPRFKD 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ + +G + L ++++ Y + + L+ D I F +
Sbjct: 372 NQSSLIIGSVLDTAEVQTMLAGI-ETVQIMPLYDMRPVTERP----FDLECFDQICFSSS 426
Query: 176 SSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+V ++ L + ++ + + A S ++L+
Sbjct: 427 RAVHNLLAVLTTEEKALLQQKTILSIGRFTSATLASFGFTNYYEAENATPESFIELIQKT 486
Query: 232 R 232
+
Sbjct: 487 K 487
>gi|26986931|ref|NP_742356.1| uroporphyrinogen-III synthase [Pseudomonas putida KT2440]
gi|24981541|gb|AAN65820.1|AE016210_8 uroporphyrinogen-III synthetase [Pseudomonas putida KT2440]
Length = 255
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 79/245 (32%), Gaps = 16/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
+++TRP + + + G +PL + + L + AI + S
Sbjct: 5 RLLLTRPAEDCAALAQSLAAAGVGSSCLPLLEIEPITVQAPQRLSLEGLHDFQAIIVVSK 64
Query: 58 ESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ L + F +GEA+A + + G F + + L + ++
Sbjct: 65 PAARLLLEHLAETSIQPPQRGWFTVGEATAGVLQGAGLKVCFPPRGDDSEALLALPALRQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNAD 168
L P ++ + G + L E + ++ Y AYP T+ + + +
Sbjct: 125 ALTEPAPRVLIVRGVGGRELLAERLAEQGASVEYLELYRRCLPAYPAGTLMRRIEAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ + + + + S +A A+ V T+LL
Sbjct: 185 GLVVSSGQGFEHLQQMAGADWLRLAQLPLFVPSPRVAEQAKAAGAQQVVDCRGASATALL 244
Query: 226 KLLPL 230
+
Sbjct: 245 AAVQR 249
>gi|226326700|ref|ZP_03802218.1| hypothetical protein PROPEN_00553 [Proteus penneri ATCC 35198]
gi|225204921|gb|EEG87275.1| hypothetical protein PROPEN_00553 [Proteus penneri ATCC 35198]
Length = 214
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 58/206 (28%), Gaps = 12/206 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I++TRP +++ G PL RE L ++ + + S
Sbjct: 1 MSILVTRPNPAGKALTQRLIDAGKTAFQAPLIEITAGRELPLLDAKLKGLKAGDCVFLLS 60
Query: 57 SESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++S + + S Q + + ++
Sbjct: 61 KNAVSYANWQLNQLQQSWPDTLSYYGIGKSTAKDFQHLSSLPICYPEQGETSEDLLNLSA 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ + ++ L G L + + +CY I Y + A
Sbjct: 121 LNQVKNRRILLLRGNGGRDLLAKTLSQRGAIVDECECYQRLFINYSPEEFALQWEKAQVD 180
Query: 170 -ILFYARSSVLYFFSLPLPAKISAAF 194
++ + + F L +K S A
Sbjct: 181 TLVVTSGEMLQQLFDLVAESKKSMAV 206
>gi|104784254|ref|YP_610752.1| uroporphyrinogen-III synthase [Pseudomonas entomophila L48]
gi|95113241|emb|CAK17969.1| uroporphyrinogen III synthase [Pseudomonas entomophila L48]
Length = 255
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 61/229 (26%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSS 57
+++TRP + + + G +PL LA AI + S
Sbjct: 5 RLLLTRPEEDCAALAQSLADAGIASASLPLLAIEPVALEPRQQERLAEIGQAQAIIVVSK 64
Query: 58 ESLSTLPANFCR--HTPIFAIGEASACL-----ARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ L + P A + D+S L ++
Sbjct: 65 PAARLLLEQLDQAGVEPPHAGWFTVGEATAGVLQARGLLVTFPTEGDDSEALLAHPFLRQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--D 168
+ P ++ + G + L E + ++ Y YP T+ + +
Sbjct: 125 AIALPTSRVLIVRGVGGRELLAERLAEQGASVDYLELYRRCLPHYPAGTLTQCIDGERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVT 214
++ + + + L S +A A V
Sbjct: 185 GLVVSSGQGLEHLHQLAGTDWPRLSRLPLFVPSPRVADQARALGAREVV 233
>gi|77461707|ref|YP_351214.1| uroporphyrinogen-III synthase [Pseudomonas fluorescens Pf0-1]
gi|77385710|gb|ABA77223.1| uroporphyrinogen-III synthase [Pseudomonas fluorescens Pf0-1]
Length = 255
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 73/229 (31%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
+++TRP + + + G+ +PL S + Y A+ + S
Sbjct: 5 RLLLTRPAEDCSALAAVLAEQGFFSSCLPLLEIAPLPVSDTMRRTIMQLPRYSAVIVVSK 64
Query: 58 ESLSTLPANFC------RHTPIFAIGEASACLARQKGFT-QIFHGKDNSINLAKIIVEQK 110
+ P F++G A+A + R +G D+S L ++ +
Sbjct: 65 PAARIAVDLLDALRLATPTMPWFSVGAATAAILRDRGLDVSFPDAGDDSEALLQLPRLLE 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNAD 168
+ P ++ L G+ + L + ++ Y YP + + + +
Sbjct: 125 AVAMPGSQVLILRGEGGRELLGERLRTLGASVEYLELYRRDLPDYPPQELPRRIAAERLN 184
Query: 169 AILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
++ + + L PA S +A A+ V
Sbjct: 185 GLVVSSGQGFEHLRQLAGDSWPALAQLPLFVPSPRVAEQASAAGARTVV 233
>gi|110803870|ref|YP_698740.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens SM101]
gi|110684371|gb|ABG87741.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens SM101]
Length = 492
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 63/219 (28%), Gaps = 12/219 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR +++ + K++++G + E++ + + Y I TS +
Sbjct: 252 NICLTRSKEQSKEIKWKLKELGAEVTEINSIKIKETSENLDEYINTLEKYDHIVFTSVNA 311
Query: 60 LSTLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIVEQKVLFT 114
++ + I A ++ + A+ + E
Sbjct: 312 VNVFFDYLVKKRVDIRKIKADFAVLGKATKKALIARGIVPSIMAHSFTAEGLFEVLKDNI 371
Query: 115 PQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ + D L ++ Y + + D +L+
Sbjct: 372 KEGEEVLIPCSSLSREYLFDNLASLGAKCHRVNIYDTICGDVKNPRA---FKEVDMVLYT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKN 211
+ S+V + + + + A+ S
Sbjct: 429 SPSTVKNMIDMIGLESLKEKVSIAIGPITLKALNESGIE 467
>gi|496215|gb|AAA18908.1| uropprphyrinogen-III-synthase [Pseudomonas aeruginosa]
Length = 251
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 65/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
+++TRP ++ + + G +PL E+ Y A+ + S
Sbjct: 5 RLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSK 64
Query: 58 ESLSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQK 110
+ R+ P + A+ + + + + +S L + Q
Sbjct: 65 PAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQD 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNAD 168
L ++ + G+ + L + + + Y + YP + + +
Sbjct: 125 SLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVT 214
++ + + S+ S +A V
Sbjct: 185 GLVVSSGQGLPKSVSVGGSDWPEIGRLPLFVPSPRVAEMARELGAQRVI 233
>gi|207723609|ref|YP_002254007.1| bifunctional protein: uroporphyrin-III c-methyltransferase and
uroporphyrinogen-III synthase [Ralstonia solanacearum
MolK2]
gi|206588812|emb|CAQ35774.1| bifunctional protein: uroporphyrin-III c-methyltransferase and
uroporphyrinogen-III synthase [Ralstonia solanacearum
MolK2]
Length = 715
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/255 (15%), Positives = 72/255 (28%), Gaps = 30/255 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+V+TRP +A +++ G + PL LA Y + S
Sbjct: 45 VVVTRPRAQAPMLVAALERHGLRTLQFPLLDIAPTPNLDDLRAALADPSRYALVVFVSPN 104
Query: 59 SLSTLPA------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK-------- 104
++ + + + P+ +G ASA G H A
Sbjct: 105 AVQQAFSAMPEGFRWPQDVPVAVVGPASAQALAAHGVEPPTHSVIRPDVHADDARQDSEA 164
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS---QDIAYPETTMK 161
+ + ++ + G D L E + +R ++ Y A ++
Sbjct: 165 LYARLDPAQLSGREVLIVRGNGGREWLADRLREAGVAVRTVEAYRRSVPVPDAAAWAALR 224
Query: 162 NLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVV 213
+L A + +V SL +A I + V
Sbjct: 225 EVLAGRHAWTLTSSEAVRNLDSLARASLTAAEVDTLHAAPCFAPHARIVEQAQSLGFRDV 284
Query: 214 TVACFPKETSLLKLL 228
T+ + LL L
Sbjct: 285 TLT-GAGDDRLLAGL 298
>gi|13473576|ref|NP_105144.1| uroporphyrinogen-III synthase [Mesorhizobium loti MAFF303099]
gi|14024326|dbj|BAB50930.1| mll4221 [Mesorhizobium loti MAFF303099]
Length = 238
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 15/237 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++TRP A RT ++Q+ G+ PV++PL+ + + A+A+TS+ ++
Sbjct: 3 RVLVTRPEPGASRTALRLQETGFQPVVLPLTETVALPADAGF-VTGDAVAVAVTSANAVR 61
Query: 62 TLPANFC---RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
P A+G +A AR +GFT + G ++ L + P K
Sbjct: 62 HASNEVIAALAALPCHAVGARTAEAARMRGFTSVIEGPGDAEAL----ADAIAAALPGKA 117
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
+ YL G+ R FE + + +R ++ Y + + Y + T+ LL +L Y+
Sbjct: 118 ITYLCGRVRFAMFEQRMEAAGVRVRAVETYDTLPVPYSDGTILALLSGQPVDAVLLYSAK 177
Query: 177 SVLYFFSL-----PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +L A LS IA+A + +A P +LL LL
Sbjct: 178 AAAAMQALTKRPALQEAFEKTQVFALSARIAAAFGGGAGKAIRIAARPDGEALLALL 234
>gi|194290489|ref|YP_002006396.1| bifunctional uroporphyrinogen-iii synthetase/uroporphyrin-iii
c-methyltransferase [Cupriavidus taiwanensis LMG 19424]
gi|193224324|emb|CAQ70335.1| BIFUNCTIONAL: UROPORPHYRIN-III C-METHYLTRANSFERASE AND
UROPORPHYRINOGEN-III SYNTHASE TRANSMEMBRANE PROTEIN
[Cupriavidus taiwanensis LMG 19424]
Length = 712
Score = 87.2 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 67/275 (24%), Gaps = 51/275 (18%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+V+TRP ++ + E +Q G + PL + LA ++ + S
Sbjct: 6 VVVTRPAGQSRQLTEALQGAGLDVLSFPLLAIGPAADDAPLRAALARLDTFALVVFVSPN 65
Query: 59 SLST--------------------------------LPANFCRHTPIFAIGEASACLARQ 86
+++ L I A A
Sbjct: 66 AIAFALDALAGVQGSAVARWPVPVAVAVVGPASVAALAERGIAAPAYRVIAPAGANANGA 125
Query: 87 KGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVID 146
+ + + + + KP++ + G D L E + ++
Sbjct: 126 GHDDTVPDAEALRFDSEALWAQLDPAALAGKPVLIIRGNGGRDWLGDRLREAGAQVEAVE 185
Query: 147 CYYSQDIAYPETTMKNLLQN------ADAILFYARSSVLYFFSLPLPA--------KISA 192
Y + + + A L + +V L
Sbjct: 186 AYQRTLPEPGAMQWQAVRDHLRPGAAPHAWLLTSSEAVRNLDVLARQHLSPQEDAALRQV 245
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ IA A + A P + LL
Sbjct: 246 QCIAPHARIAEQALALGFAHIQRAA-PGDAGLLAA 279
>gi|161898393|ref|YP_512023.2| uroporphyrinogen-III synthase, putative [Jannaschia sp. CCS1]
Length = 231
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 86/227 (37%), Gaps = 13/227 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP + R ++ G ++ PL + + LA + +TS ++
Sbjct: 9 LLLTRPRPASERFARGLE--GADIIIAPLMEIVGTGAEIDLA---GVHGLILTSQAAVPF 63
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
+P P + +G + +AR G + F G+D A +V+ P PL++L
Sbjct: 64 VPQT---TLPAYCVGARTTAVARGAGISADFVGED-----ADALVQALAARRPDGPLLHL 115
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFF 182
G L H I ++ + Y +D + + + ++ S + F
Sbjct: 116 HGTHTRGDIARRLSAHGITVQSLTLYDQRDCPPDPAFYDAITRPDLIVPLFSPRSAILFA 175
Query: 183 SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + L LS +A A+P + VA P + LL
Sbjct: 176 AASQTLRDDTVLLALSPAVAHALPPRMQTQTRVAAAPTGQQMRDLLE 222
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 6/40 (15%), Positives = 13/40 (32%), Gaps = 2/40 (5%)
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
C+ + + + V +L++ L RR
Sbjct: 70 PAYCVGARTTAVARGAGISADFVGE--DADALVQALAARR 107
>gi|88807128|ref|ZP_01122640.1| Uroporphyrinogen-III synthase [Synechococcus sp. WH 7805]
gi|88788342|gb|EAR19497.1| Uroporphyrinogen-III synthase [Synechococcus sp. WH 7805]
Length = 272
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 73/248 (29%), Gaps = 23/248 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR +++ + ++ +G + +P LA ++ + ++S+
Sbjct: 14 VVMTRAVEQQSEGRRLLEALGAKVLDLPALEIGPPDHWGALDDALAEWDTFHWLIVSSAN 73
Query: 59 SLSTLPANFCRHTPIFAIGEAS-------ACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + + A AS AR+ +A ++E
Sbjct: 74 GVEAVEDRLQKQGRTLAHRPASLKIAAVGRKTARRLEELGSEADFVPPEFVADSLIEHFP 133
Query: 112 LFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NAD 168
+ ++ + E + + Y S+ + L+ + D
Sbjct: 134 VSGWGLRILLPRVQSGGRTVLAEAFGEAGARVVEVPAYESRCPEAIPAATLDALRAGSVD 193
Query: 169 AILFYARSSVLYFFSLPLPA---------KISAAFLCLSNNIASAIPASYKNVVTVACFP 219
AI F + +VL+ L + AA + + + V A
Sbjct: 194 AICFTSGKTVLHTTHLLAQSMGEEEATTQLQRAAVVSIGPQTSERCRKLLGRVDQEAHPH 253
Query: 220 KETSLLKL 227
L+
Sbjct: 254 DLEGLVMA 261
>gi|313633106|gb|EFS00004.1| uroporphyrinogen-III synthase [Listeria seeligeri FSL N1-067]
Length = 240
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 74/232 (31%), Gaps = 6/232 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K ++ Q + G++ +PL VF + QQ+ I TS ++
Sbjct: 4 KVVLTREASKNIKWQAYFAENGFVVDSVPLIETKPQNV-VFTSEQQNVEWIFFTSVNAVE 62
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
P + + + + E + + ++
Sbjct: 63 YFFKQHKVTKPYKYAVIGEKTKEKLADYGYLPSFIPTLYQTEPFLSEWLEKYPEKTSILL 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSSVL 179
ED L E + ++ Y + ++ +K L I+F + S+
Sbjct: 123 PKSNLSRTVMEDTLKEKGYVIFPVELYETIFPTKSKSLLKQLFTQNENQIIIFASPSAWK 182
Query: 180 YFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S+ K + + N AI A V A +L L+
Sbjct: 183 NFYSVAKNFPSQKGNWRIASIGNVTTKAILADGYEVTYQAETFTMKNLADLI 234
>gi|330965075|gb|EGH65335.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 258
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 66/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALATVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L ++
Sbjct: 65 PAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLDHPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNAD 168
+ P ++ + G + L E + + Y + T+ + ++ +
Sbjct: 125 AIAIPGSRVLIMRGDEGRELLAEQLRERGAGVDYLPLYRRYLPQHAPDTLPQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVT 214
++ + + L + S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLAGLPLFVPSPRVASLAQAAGARNVI 233
>gi|315282477|ref|ZP_07870882.1| uroporphyrinogen-III synthase [Listeria marthii FSL S4-120]
gi|313613875|gb|EFR87614.1| uroporphyrinogen-III synthase [Listeria marthii FSL S4-120]
Length = 240
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 75/232 (32%), Gaps = 6/232 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + G+ +PL + ++ Q+ + +TS ++
Sbjct: 4 KVVLTREASKNKPWQTYFSQNGFNVESIPLIETHPKKFNLNQEQ-QAADWLFLTSVNAVE 62
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
AN C T + F ++ + E + Q ++
Sbjct: 63 YFFANQCVETNYKFAVIGEKTQEKLAEFGYTPSFVPSAYQSEVFLSEWLNEYPNQTSILL 122
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
+D LIE + I+ Y + + +T + N L I+F + S+
Sbjct: 123 PQSNLSRSIIKDTLIEKGHLVFSIELYETSFPEHSKTMLANQLKLNEKQIIIFASPSAWK 182
Query: 180 YFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S+ + + N AI A +V L L+
Sbjct: 183 NFYSIAKTFPNQMGNWRIASIGNVTTEAILADGWSVTYQPKTFTMKHLADLI 234
>gi|149204334|ref|ZP_01881301.1| hypothetical protein RTM1035_18315 [Roseovarius sp. TM1035]
gi|149142219|gb|EDM30266.1| hypothetical protein RTM1035_18315 [Roseovarius sp. TM1035]
Length = 243
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 75/229 (32%), Gaps = 12/229 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIP--VMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
I+ITRP +A R +++ + V+ P+ + L + TS +
Sbjct: 5 ILITRPEPEASRMAAEVKALCGDVAVVVSPVMQIAYGG---ALPDLTGDETLIFTSRHGV 61
Query: 61 STLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ R +P +A+G+A+A A +G I G D A ++ + P
Sbjct: 62 EGFCRLSARRDSPCYAVGDATAEAAEAQGLRAISAGGD-----AGALLARIAEDGACGPF 116
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSV 178
++L G L R Y + L IL + +
Sbjct: 117 LHLRGAHVAADVAGALRAAGHTARDAVVYDQVEATLSAEARALLRGAEPVILPLMSPRTA 176
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F + +S N A A+P V +A P +L +
Sbjct: 177 RIFLAQAEGVSAPLLIAAISRNAADALPEDVAACVRIAEMPDLPGVLAV 225
>gi|78043231|ref|YP_360052.1| uroporphyrinogen-III synthase [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995346|gb|ABB14245.1| uroporphyrinogen-III synthase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 343
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 72/243 (29%), Gaps = 18/243 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL-AMQQSYGAIAITSSESL 60
++I R R + +G PL + + L +Y + TS+ +
Sbjct: 102 RVLIPRTEADEKRECGRFGAIGIEV---PLLKITYIPDERILQLDFSAYDWLIFTSAHGV 158
Query: 61 STLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
N I +GE +A ++ G T F + + + +E
Sbjct: 159 EGFFFNLNYFNVSLENFIGKIAVVGEKTAKALKKYGLTADFSPQKFTA--KDLALELTTS 216
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--I 170
QK +I + G + L + IP + + Y + + + LL+ +
Sbjct: 217 GMIQKGVIVIQGNLGRPELLEILARNNIPTKKLVVYENAPNVDIKPFLNGLLKAKLIDVL 276
Query: 171 LFYARSSVLYFFSLPLPAKISAAF--LCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F + S+ F+ ++ + A + L + L
Sbjct: 277 FFTSPSTFNNFYQFISDENLAKNLPHFAIGPTTYEAFLQKDIRRKYFSSEHTLEGLWQTL 336
Query: 229 PLR 231
Sbjct: 337 KNH 339
>gi|255036672|ref|YP_003087293.1| Uroporphyrinogen III synthase HEM4 [Dyadobacter fermentans DSM
18053]
gi|254949428|gb|ACT94128.1| Uroporphyrinogen III synthase HEM4 [Dyadobacter fermentans DSM
18053]
Length = 260
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 60/235 (25%), Gaps = 17/235 (7%)
Query: 7 RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITSSESLSTL 63
RP + E +K P F + A+ TS ++
Sbjct: 24 RPADENSPYYELARKYNIKVDFRPFIQVDGVSYKDFRKQKVNILDHTAVIFTSRNAIDHF 83
Query: 64 PANFCR-------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
F I E +A ++ + + A++I +
Sbjct: 84 FRICNEGRVEVPATMKYFCISEQTANYLQKYIVIRKRKIFTGTKTAAELIELMRKHKK-- 141
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ +Y R ++ + Y + + D I F++ S
Sbjct: 142 EKFLYPCSDVRKNDIPEFADTEEFHFTEATMYQTVSSDLSD----LEDVYYDIIAFFSPS 197
Query: 177 SVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ F K + A A+ + + A P S+ L L
Sbjct: 198 GIKSLFDNFPDFKQNNTRIAAFGPTTAKAVEDAGLKLDIQAPLPNAPSMTGALDL 252
>gi|289625849|ref|ZP_06458803.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289646419|ref|ZP_06477762.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. aesculi
str. 2250]
gi|330867940|gb|EGH02649.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 257
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/229 (10%), Positives = 68/229 (29%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALAKVLAEAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLLQNAD 168
+ P ++ + G + L + + + Y + + ++ +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLRALGVGVDYLPLYRRYLPQHATDAVPQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
++ + + L P S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIAQAAGARTVI 233
>gi|116872574|ref|YP_849355.1| uroporphyrinogen III synthase/methyltransferase [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116741452|emb|CAK20576.1| uroporphyrinogen III synthase/methyltransferase [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 493
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R + E+I+ +G M P + + I TS E++
Sbjct: 252 KVLLPRARAGKSKLAEQIRDLGGEVTMYPNIQVLDVTPTKTKQELCETREIIFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + I A++I+E F
Sbjct: 312 RFFNYLATLHLDIRTLKNTHLTAIGKQTKEALSEKGIVPDSFIQRRSAELILEHLARFQK 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ +G ++ + + ++ Y + + L++ + I F +
Sbjct: 372 NSSNLIIGSVVDTAE-VGAILSNVKAIEMMPLYDLRPVTERP----FDLESFEQICFSSS 426
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SV + + + L + ++ + + N A SL++L+
Sbjct: 427 RSVQNLLDVLTTEEKAILKTKTILSIGRFTSATLQSFGINDFEEADSATPESLIELIQKT 486
Query: 232 R 232
+
Sbjct: 487 K 487
>gi|172061375|ref|YP_001809027.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia ambifaria MC40-6]
gi|171993892|gb|ACB64811.1| protein of unknown function DUF513 hemX [Burkholderia ambifaria
MC40-6]
Length = 655
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 68/259 (26%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ + G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSAGLSAQLAEAGCDVLEFPLIDIAPVDDPAPLDAAFAALGDYALVIFVSPNA 70
Query: 60 LSTLPANFCRHT----PIFAIGEASACLARQKGFTQIFH-------------GKDNSINL 102
+ A + P+ +G S + G H +S NL
Sbjct: 71 IDRALAQYGAIWPNALPVGVVGPGSVAALERHGIAAPAHRVIAPQAPADGGVPHYDSENL 130
Query: 103 AKIIVEQK--VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----P 156
I K ++ + G + L E + ++ Y
Sbjct: 131 FASIEAAFGGAQALAGKRVLIVRGDGGREWLAERLREAGADVTLVAAYRRVVPEPRVGAW 190
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPAS 208
E L A L + V L A A + I A
Sbjct: 191 ERVHALLAGAPHAWLVTSSEGVRNLHELARTHLNDAEIEALKHAPLVTPHPRIEQTARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|300312228|ref|YP_003776320.1| uroporphyrinogen-III synthase [Herbaspirillum seropedicae SmR1]
gi|300075013|gb|ADJ64412.1| uroporphyrinogen-III synthase protein [Herbaspirillum seropedicae
SmR1]
Length = 269
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 67/245 (27%), Gaps = 26/245 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TRP ++A +Q +G V+ PL + LA + + + S
Sbjct: 13 VVVTRPRQQAHAFAASVQALGRPAVVFPLLEISAVEDVATLQAMLARLEEFALVVFVSPN 72
Query: 59 SLSTLPANFCRHTPIFAIGEAS-----------ACLARQKGFTQIFHGKDNSINLAKIIV 107
++ A P A A T + + ++ +++
Sbjct: 73 AIDAAFAQLPAGRPWPAKVAIGIVGEGSRLALRAHGVDAACATLYGPQRADKMDSEELLK 132
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT---MKNLL 164
+ + + + G+ + L + + + + Y + +LL
Sbjct: 133 SLPLAQLRGQRALIVRGQSGRDFLSEALQQQGVTVEYLTAYRRTAPRLDAQNGPLLLDLL 192
Query: 165 QNADAILFYARSSVLYFFSLPLPAK--------ISAAFLCLSNNIASAIPASYKNVVTVA 216
+ + ++ L A + IA V +
Sbjct: 193 DGGADWVITSSEALRNLVDLTRLAGGEERVVKLQRQRIFVSHHRIAETAREQGFERVVLT 252
Query: 217 CFPKE 221
E
Sbjct: 253 GSGDE 257
>gi|168214448|ref|ZP_02640073.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens CPE str. F4969]
gi|170714089|gb|EDT26271.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens CPE str. F4969]
Length = 492
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/221 (9%), Positives = 64/221 (28%), Gaps = 16/221 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR +++ + K++++G + E++ + + Y I TS +
Sbjct: 252 NICLTRSKEQSKEIKWKLKELGAEVTEINSIKIKETAENLDEYINTLEKYDHIVFTSVNA 311
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ ++ +G+ + +G + + K
Sbjct: 312 VNIFFDYLVKNRVDIRKIKADFAVLGKVTKKALISRGIVPSIMAHSFTA--EGLFEVLKD 369
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ ++ + D L ++ Y + + D +L
Sbjct: 370 NIKEGEEVLIPCSSLSREYLFDNLASLGAKCHRVNIYDTVCGDVKNPRA---FKEVDMVL 426
Query: 172 FYARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKN 211
+ + S+V + + + + A+ S
Sbjct: 427 YTSPSTVKNMIDMIGLEALKEKVSIAIGPITLKALNESGIE 467
>gi|217964731|ref|YP_002350409.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes HCC23]
gi|217334001|gb|ACK39795.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes HCC23]
gi|307570708|emb|CAR83887.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes L99]
Length = 493
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/241 (9%), Positives = 67/241 (27%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVVDVAPTKTREALIEINELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + I ++I+E
Sbjct: 312 RFFDYLTKLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQK 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ +G + ++ + ++ Y + + L + + + F +
Sbjct: 372 NASNLIIGSIVDTSE-VNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSS 426
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SV + + + L + ++ + + N A SL++L+
Sbjct: 427 RSVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINNFIEAESATPESLIELIQKT 486
Query: 232 R 232
+
Sbjct: 487 K 487
>gi|257485540|ref|ZP_05639581.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331011832|gb|EGH91888.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 257
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/229 (10%), Positives = 68/229 (29%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALAKVLAEAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L + ++
Sbjct: 65 PAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLGLPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNAD 168
+ P ++ + G + L + + + Y + + + ++ +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLRALGVGVDYLPLYRRYLPQHAPDALPQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
++ + + L P S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIAQAAGARTVI 233
>gi|315302737|ref|ZP_07873515.1| porphyrin biosynthesis protein HemD [Listeria ivanovii FSL F6-596]
gi|313628889|gb|EFR97244.1| porphyrin biosynthesis protein HemD [Listeria ivanovii FSL F6-596]
Length = 493
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 76/244 (31%), Gaps = 21/244 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R K E I+ +G M P + + Y + TS E++
Sbjct: 252 KVLLPRARKGKSMLAENIRDLGGEVTMYPNIQVLDIAPTKTAEQLAEYQELLFTSKEAVE 311
Query: 62 TLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++T + AIG+ + +KG K S ++I+E
Sbjct: 312 RFFNYLASINLDVRSLKNTHLTAIGKQTKEAFTEKGIIPDSFIKRRSQ---ELILEHAPR 368
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
F + + +G + L ++ + Y + + L+ D I F
Sbjct: 369 FKANQSSLIIGSVLDTAEVQTMLAGI-ETVQTMPLYDMRPVTERP----FDLECFDQICF 423
Query: 173 YARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ +V ++ L + ++ + + A S ++L+
Sbjct: 424 SSSRAVHNLLAVLTTEEKALLQQKTILSIGRFTSATLASFGFMNYYEAENATPESFIELI 483
Query: 229 PLRR 232
+
Sbjct: 484 QKTK 487
>gi|163742571|ref|ZP_02149957.1| uroporphyrinogen-III synthase, putative [Phaeobacter gallaeciensis
2.10]
gi|161384156|gb|EDQ08539.1| uroporphyrinogen-III synthase, putative [Phaeobacter gallaeciensis
2.10]
Length = 255
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 63/227 (27%), Gaps = 12/227 (5%)
Query: 3 IVITRPIKKALRTQEKI---QKMGYIPVMMPLSYFIHDRESVFLAMQQSYGA-IAITSSE 58
+++TRP A R E + + + PL + + + +S+
Sbjct: 15 LLMTRPRVVAERFVEDLPASTRATLQVIYAPLIRTTPLNPPSDPSERGLFSGDAIFSSAN 74
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ A + A + A +V+ P P
Sbjct: 75 GVRYSTAPVAGQDAYCVGQRTTQAAAAKGWRAICCGLD------ADALVQTLTEVPPAGP 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-TMKNLLQNADAILFYARSS 177
L +L G + L I R Y + Y + Q + + ++ +
Sbjct: 129 LTHLRGVHSRGDIVERLRLVGINCREHVIYDQILLPYDSEARIAMDAQASLIVPLFSPRT 188
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
F L P + S +A + + + P T++
Sbjct: 189 AQQFVKLA-PYCAELHLIAFSKAVADPLKGLKCKDLQICKSPTATAM 234
>gi|313609219|gb|EFR84889.1| porphyrin biosynthesis protein HemD [Listeria monocytogenes FSL
F2-208]
Length = 493
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/240 (8%), Positives = 70/240 (29%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVVDVAPTKTREALIEIKELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + ++ + + ++ + + +
Sbjct: 312 RFFDYLTKLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLTRLQK 371
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ G + + ++ + ++ Y + + L + + + F +
Sbjct: 372 NASNLIIGSMVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSSR 427
Query: 177 SVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
SV + + + L + ++ + + N A SL++L+ +
Sbjct: 428 SVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINNFIEAESATPESLIELIQKTK 487
>gi|254830045|ref|ZP_05234700.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes 10403S]
Length = 493
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/241 (9%), Positives = 67/241 (27%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVLDVVPTKTKEELSEVSGLLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + I ++I+E
Sbjct: 312 RFFDYLAQLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQE 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ G + + ++ + ++ Y + + L + + + F +
Sbjct: 372 NAS-NLIIGSIVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSS 426
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SV + + + L + ++ + + N A SL++L+
Sbjct: 427 RSVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINHFIEAESATPESLIELIQKT 486
Query: 232 R 232
+
Sbjct: 487 K 487
>gi|182626957|ref|ZP_02954689.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens D str. JGS1721]
gi|177907693|gb|EDT70311.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens D str. JGS1721]
Length = 492
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 63/219 (28%), Gaps = 12/219 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR +++ + K++++G + ++ + + Y I TS +
Sbjct: 252 NICLTRSKEQSKEIKWKLKELGAEVTEINSIKIKETAYNLDEYINTLEKYDHIVFTSVNA 311
Query: 60 LSTLPANFCRH----TPIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIVEQKVLFT 114
++ ++ I A ++ + A+ + E
Sbjct: 312 VNVFFDYLVKNRVDIRKIKADFAVLGKATKKALIARGIVPSIMAHSFTAEGLFEVLKDNI 371
Query: 115 PQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ + D L ++ Y + + D +L+
Sbjct: 372 KEGEEVLIPCSSLSREYLFDNLASLGAKCHRVNIYDTVCGDVKNPRA---FKEVDMVLYT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKN 211
+ S+V + + + + A+ S
Sbjct: 429 SPSTVKNMIDMIGLEALKEKVSIAIGPITLKALNESGIE 467
>gi|168210026|ref|ZP_02635651.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens B str. ATCC 3626]
gi|170711839|gb|EDT24021.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens B str. ATCC 3626]
Length = 492
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 63/219 (28%), Gaps = 12/219 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR +++ + K++++G + ++ + + Y I TS +
Sbjct: 252 NICLTRSKEQSKEIKWKLKELGAEVTEINSIKIKETAYNLDEYINTLEKYDHIVFTSVNA 311
Query: 60 LSTLPANFCRH----TPIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIVEQKVLFT 114
++ ++ I A ++ + A+ + E
Sbjct: 312 VNVFFDYLVKNRVDIRKIKADFAVLGKATKKALIARGIVPSIMAHSFTAEGLFEVLKDNI 371
Query: 115 PQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ + D L ++ Y + + D +L+
Sbjct: 372 KEGEEVLIPCSSLSREYLFDNLASLGAKCHRVNIYDTVCGDVKNPRA---FKEVDMVLYT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKN 211
+ S+V + + + + A+ S
Sbjct: 429 SPSTVKNMIDMIGLEALKEKVSIAIGPITLKALNESGIE 467
>gi|11497736|ref|NP_068957.1| uroporphyrinogen III synthase (hemD) [Archaeoglobus fulgidus DSM
4304]
gi|3122182|sp|O30120|HEM4_ARCFU RecName: Full=Putative uroporphyrinogen-III synthase; Short=UROS;
AltName: Full=Hydroxymethylbilane hydrolyase
[cyclizing]; AltName: Full=Uroporphyrinogen-III
cosynthase
gi|2650529|gb|AAB91112.1| uroporphyrinogen III synthase (hemD) [Archaeoglobus fulgidus DSM
4304]
Length = 226
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 70/239 (29%), Gaps = 21/239 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++I RP + T + ++ G+ P I+ V + +TS +
Sbjct: 1 MKVLILRPAELLSETIRRFREEGFDAYGCPFIKLIYTDFDVP-----EHDFAIVTSQNAA 55
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
L R + AIG+ +A L + + + E+ K ++
Sbjct: 56 RVLRERGVRLKRVIAIGKKTAELIEAEEVLLPSKFDS------ETLYEEFAEMLRGKRVV 109
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN---ADAILFYARSS 177
+ + R I Y + + E + DAI+F +
Sbjct: 110 AFRSNAGSE--AVKRLSEVADFREIQVYRIEKLQGEEQRREVEKVREGFYDAIVFSSSMI 167
Query: 178 VLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
L A + + + A + + +++LL ++
Sbjct: 168 ARSLLELCDEKCLEALKNIFVVAIGPPTAKVLAEKGIR-AEIPEEYTFDGVIELLKSKK 225
>gi|171319138|ref|ZP_02908259.1| protein of unknown function DUF513 hemX [Burkholderia ambifaria
MEX-5]
gi|171095658|gb|EDT40617.1| protein of unknown function DUF513 hemX [Burkholderia ambifaria
MEX-5]
Length = 655
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 68/259 (26%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ + G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSAGLSAQLAEAGCDVLEFPLIDIAPVDDPAPLDAAFATLDRYALVIFVSPNA 70
Query: 60 LSTLPANFCRHT----PIFAIGEASACLARQKGFTQIFH-------------GKDNSINL 102
+ A + P+ +G S + G H +S NL
Sbjct: 71 IDRALAQYGAIWPNALPVGVVGPGSVAALERHGIAAPAHRVIAPQAPADGGVPHYDSENL 130
Query: 103 AKIIVEQK--VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----P 156
I K ++ + G + L E + ++ Y
Sbjct: 131 FASIEAAFGGAQALAAKRVLIVRGDGGREWLAERLREAGADVTLVAAYRRVVPEPRVGAW 190
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPAS 208
E L A L + V L A A + I A
Sbjct: 191 ERVHALLAGAPHAWLVTSSEGVRNLHELARTHLNDAEIEALKHAPLVTPHPRIEQTARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|222150056|ref|YP_002551013.1| uroporphyrinogen-III synthase [Agrobacterium vitis S4]
gi|221737038|gb|ACM38001.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 238
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TR + +T ++++ +G+ PV++PL++ IH + A+ Q + A+A+TSSE++
Sbjct: 1 MRVLLTRTETASRKTADRLRALGHEPVVLPLAHAIHHVDDTLSALSQPHAALAVTSSEAI 60
Query: 61 STLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+L ++ H A + + A
Sbjct: 61 RSLASHREALRGHFETPLFAVGKASASTARALGFRKVLSARGDGAALAEQIAAAPIAWAN 120
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYAR 175
PL+YL G+PR E L + I RV+D Y Q + Y E + L+ DA+L Y+
Sbjct: 121 PLLYLAGQPRKQSLEHGLRQSSITFRVVDSYTMQGLTYHEGDICARLEQKAVDAVLLYSA 180
Query: 176 SSVLYFFSLPLPAK-----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ FF+LPL K SA CLS +IA + ++N V++A P+E LL LL
Sbjct: 181 ETARRFFALPLSGKAAGLFASAHIFCLSADIAENVAKPFRNRVSIAPQPREDDLLSLL 238
>gi|195480009|ref|XP_002101102.1| GE17428 [Drosophila yakuba]
gi|194188626|gb|EDX02210.1| GE17428 [Drosophila yakuba]
Length = 277
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 83/247 (33%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSSE 58
++I + ++ E ++K + PV +P F + L Y I TS
Sbjct: 8 VIIFKSESESSDVYAETLEKHDFNPVFVPTLSFGFKNLEELRAKLQNPDKYAGIIFTSPR 67
Query: 59 SLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVE 108
+ + + + +A+GE + LA HGK N+ L + IV+
Sbjct: 68 CVEAVAESLNLGELPGGWKMLHNYAVGEVTHNLALSTLDQLFTHGKQTGNARALGEYIVD 127
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
PL+ G L E+ + + Y ++ ++ L+
Sbjct: 128 TFDGSRAL-PLLLPCGNLATDTLLSKLAENGFSVDACEVYETRCHPELGANVERALEIYG 186
Query: 169 AIL----FYARSS---VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F++ S +F+ + + + + A+ + V A P
Sbjct: 187 DSIEFLAFFSPSGVNCAQQYFTSRQLSMDKWKLVAIGPSTRRALESLGLKVYCTAERPTV 246
Query: 222 TSLLKLL 228
L+K+L
Sbjct: 247 EHLVKVL 253
>gi|302535111|ref|ZP_07287453.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. C]
gi|302444006|gb|EFL15822.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptomyces sp. C]
Length = 542
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 64/198 (32%), Gaps = 19/198 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++A ++++ G +P +P R + Y IA T
Sbjct: 282 RVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFT 341
Query: 56 SSESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAK 104
S ++ + F + + A+GE +A + G L +
Sbjct: 342 SVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALVEFGVKPDLVPSGEQSAAGLLE 401
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+F P + LIE + + Y + + P + +
Sbjct: 402 DWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPADTREAI 461
Query: 165 Q--NADAILFYARSSVLY 180
+ DA+LF + S+V
Sbjct: 462 KGGGFDAVLFTSSSTVRN 479
Score = 41.7 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 12/134 (8%), Positives = 34/134 (25%), Gaps = 11/134 (8%)
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ + + ++ K + D L + + + P+ + +
Sbjct: 268 EELAWFESKPLFGWRVLVPRTKEQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAV 327
Query: 164 LQ----NADAILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVV 213
+ I F + ++V + + A+A+
Sbjct: 328 KGLVTGRYEWIAFTSVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAAALVEFGVKPD 387
Query: 214 TV-ACFPKETSLLK 226
V + LL+
Sbjct: 388 LVPSGEQSAAGLLE 401
>gi|313835650|gb|EFS73364.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL037PA2]
gi|314928322|gb|EFS92153.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL044PA1]
gi|314970251|gb|EFT14349.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL037PA3]
gi|328908096|gb|EGG27855.1| uroporphyrinogen-III synthase [Propionibacterium sp. P08]
Length = 241
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 67/235 (28%), Gaps = 12/235 (5%)
Query: 1 MY--IVITRPIKKA-LRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAIT 55
M +V+ P + + +++ GY + L+ I ++ L + IT
Sbjct: 9 MKPPVVV--PRDDSHDKFVTTLKQAGYGVIHKALTRTIKLPQAKELTGPDLWQADWLVIT 66
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
S ++ LP A A+ A +K + + A ++ E
Sbjct: 67 SKTTVGLLPNPLPNPNIKVAAVGAATSAALRKRGIDVDFVPKDHSG-AGLVAEWPGGAV- 124
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + L + + Y + + + + ++ A
Sbjct: 125 --SVLLPVSQLAADTVPQELTNVGCTVNRCEVYTTTAVEKLPDVIAQSWPSVGIVVVTAS 182
Query: 176 SSVLYFFSLPLPAKISA-AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S L P + L A + VA P ++L +
Sbjct: 183 SVGRALVELVEPLGWRCQKLVALGKPTARTLGELGHPANAVASSPTPEAVLDAVE 237
>gi|2495182|sp|Q59683|HEM4_PROMI RecName: Full=Uroporphyrinogen-III synthase; Short=UROS; AltName:
Full=Hydroxymethylbilane hydrolyase [cyclizing];
AltName: Full=Uroporphyrinogen-III cosynthase
gi|726358|gb|AAC44328.1| uroporphyrinogen III synthase [Proteus mirabilis]
Length = 199
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/186 (13%), Positives = 48/186 (25%), Gaps = 10/186 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP + +++ G PL +E L + + + S
Sbjct: 1 MSILITRPSPAGEQLTQRLIDAGKHAFHAPLIEIAAGKELSILENKLNKLSTGDYLFLLS 60
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ T + S Q+ + ++
Sbjct: 61 KNAVWYANWQLNQLQQSWPDTLFYYGIGQSTAEEFQQLTAHSIRYPEFGETSEDLLALSS 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ K ++ L G L + + +CY I Y +NA
Sbjct: 121 LQQIENKRVLLLRGNGGRELLATTLRQRGAIVDECECYQRLFIDYVSEEFALKWKNAQVE 180
Query: 171 LFYARS 176
Sbjct: 181 YLCGHQ 186
>gi|50841791|ref|YP_055018.1| uroporphyrinogen-III synthase, HemD [Propionibacterium acnes
KPA171202]
gi|50839393|gb|AAT82060.1| uroporphyrinogen-III synthase, HemD [Propionibacterium acnes
KPA171202]
gi|315106338|gb|EFT78314.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL030PA1]
Length = 241
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/231 (11%), Positives = 68/231 (29%), Gaps = 10/231 (4%)
Query: 3 IVITRPIKKA-LRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAITSSES 59
+V+ P + + +++ GY + L+ + ++ L + +TS +
Sbjct: 13 VVV--PRDDSHDKFVTTLKQAGYGVIHTALTRTVTLPDAERLTAPDLWQADWLVVTSKTT 70
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ L + I +A A + + + A ++ E +
Sbjct: 71 V-GLLPTPLPNPNIKVAAVGAATSAALRTRGIDVDFVPENHSGAGLVAEWP---GGVANI 126
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + L + + ++ Y + + + + ++ A S
Sbjct: 127 LLPASQLTADTVPLGLTKVGCTVNRLEIYTTAAVEKLPEVIAQSWPSVGVVVVTASSVGR 186
Query: 180 YFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L P + L A + VA P ++L+ +
Sbjct: 187 ALVELVEPLGWRRQKLVALGKPTARTLEVLGHPAHAVASSPTPEAVLEAVE 237
>gi|195130747|ref|XP_002009812.1| GI15566 [Drosophila mojavensis]
gi|193908262|gb|EDW07129.1| GI15566 [Drosophila mojavensis]
Length = 269
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 79/245 (32%), Gaps = 20/245 (8%)
Query: 3 IVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSE 58
++I + ++ E + + P+ +P F L Y I TS
Sbjct: 8 VIIFKSESESTDVYAETLLAHNFQPLFVPTLSFGFKNLEQLRAKLQTPDKYAGIIFTSPR 67
Query: 59 SLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVE 108
+ + + +A+GE + LA HGK N+ NL IV+
Sbjct: 68 CVEAVAEALQLAELPSGWKLLHNYAVGEVTHNLAMSTLQQLFTHGKQTGNARNLGDFIVD 127
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
PL+ G L E+ + + Y ++ M L+ +
Sbjct: 128 TFDGSRNL-PLLLPCGNLATDTLLSKLAENGFCVDACEVYETKCNPQLAECMDRALKAEN 186
Query: 169 A--ILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F++ S V + I + + + A+ + V+ A P
Sbjct: 187 IEFLAFFSPSGVNCAYEYFKARNIAPDQWKLVAIGPSTRRALESLGLKVLCTAERPTVEH 246
Query: 224 LLKLL 228
L+K+L
Sbjct: 247 LVKVL 251
>gi|289424764|ref|ZP_06426547.1| uroporphyrinogen-III synthase [Propionibacterium acnes SK187]
gi|289428947|ref|ZP_06430627.1| uroporphyrinogen-III synthase [Propionibacterium acnes J165]
gi|295129868|ref|YP_003580531.1| uroporphyrinogen-III synthase [Propionibacterium acnes SK137]
gi|289155461|gb|EFD04143.1| uroporphyrinogen-III synthase [Propionibacterium acnes SK187]
gi|289157948|gb|EFD06171.1| uroporphyrinogen-III synthase [Propionibacterium acnes J165]
gi|291376310|gb|ADE00165.1| uroporphyrinogen-III synthase [Propionibacterium acnes SK137]
gi|313765243|gb|EFS36607.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL013PA1]
gi|313772843|gb|EFS38809.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL074PA1]
gi|313793134|gb|EFS41201.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL110PA1]
gi|313802778|gb|EFS43996.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL110PA2]
gi|313806433|gb|EFS44940.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL087PA2]
gi|313810982|gb|EFS48696.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL083PA1]
gi|313815285|gb|EFS52999.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL059PA1]
gi|313821952|gb|EFS59666.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL036PA1]
gi|313824152|gb|EFS61866.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL036PA2]
gi|313826519|gb|EFS64233.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL063PA1]
gi|313828700|gb|EFS66414.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL063PA2]
gi|313831748|gb|EFS69462.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL007PA1]
gi|313834371|gb|EFS72085.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL056PA1]
gi|313840062|gb|EFS77776.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL086PA1]
gi|314916104|gb|EFS79935.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL005PA4]
gi|314917025|gb|EFS80856.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL050PA1]
gi|314921301|gb|EFS85132.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL050PA3]
gi|314926612|gb|EFS90443.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL036PA3]
gi|314931037|gb|EFS94868.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL067PA1]
gi|314955011|gb|EFS99417.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL027PA1]
gi|314959050|gb|EFT03152.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL002PA1]
gi|314961323|gb|EFT05424.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL002PA2]
gi|314964546|gb|EFT08646.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL082PA1]
gi|314969646|gb|EFT13744.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL037PA1]
gi|314974712|gb|EFT18807.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL053PA1]
gi|314977092|gb|EFT21187.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL045PA1]
gi|314980333|gb|EFT24427.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL072PA2]
gi|314985508|gb|EFT29600.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL005PA1]
gi|314987332|gb|EFT31423.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL005PA2]
gi|314989125|gb|EFT33216.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL005PA3]
gi|315078438|gb|EFT50469.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL053PA2]
gi|315082097|gb|EFT54073.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL078PA1]
gi|315082760|gb|EFT54736.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL027PA2]
gi|315086119|gb|EFT58095.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL002PA3]
gi|315087703|gb|EFT59679.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL072PA1]
gi|315097343|gb|EFT69319.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL038PA1]
gi|315099448|gb|EFT71424.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL059PA2]
gi|315102047|gb|EFT74023.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL046PA1]
gi|315110127|gb|EFT82103.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL030PA2]
gi|327331371|gb|EGE73110.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL096PA2]
gi|327333358|gb|EGE75078.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL096PA3]
gi|327334881|gb|EGE76592.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL097PA1]
gi|327445625|gb|EGE92279.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL013PA2]
gi|327447247|gb|EGE93901.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL043PA1]
gi|327449720|gb|EGE96374.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL043PA2]
gi|327454570|gb|EGF01225.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL087PA3]
gi|327456642|gb|EGF03297.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL083PA2]
gi|327457081|gb|EGF03736.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL092PA1]
gi|328755625|gb|EGF69241.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL087PA1]
gi|328756705|gb|EGF70321.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL025PA2]
gi|328758365|gb|EGF71981.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL020PA1]
gi|328761894|gb|EGF75404.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL099PA1]
gi|332674708|gb|AEE71524.1| uroporphyrinogen-III synthase [Propionibacterium acnes 266]
Length = 241
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/231 (11%), Positives = 68/231 (29%), Gaps = 10/231 (4%)
Query: 3 IVITRPIKKA-LRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAITSSES 59
+V+ P + + +++ GY + L+ + ++ L + +TS +
Sbjct: 13 VVV--PRDDSHDKFVTTLKQAGYGVIHTALTRTVTLPDAERLTAPDLWQADWLVVTSKTT 70
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ L + I +A A + + + A ++ E +
Sbjct: 71 V-GLLPTPLPNPNIKVAAVGAATSAALRTRGIDVDFVPENHSGAGLVAEWP---GGVASI 126
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + L + + ++ Y + + + + ++ A S
Sbjct: 127 LLPASQLTADTVPLGLTKVGCTVNRLEIYTTAAVEKLPEVIAQSWPSVGVVVVTASSVGR 186
Query: 180 YFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L P + L A + VA P ++L+ +
Sbjct: 187 ALVELVEPLGWRRQKLVALGKPTARTLEVLGHPAHAVASSPTPEAVLEAVE 237
>gi|159902670|ref|YP_001550014.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9211]
gi|159887846|gb|ABX08060.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9211]
Length = 282
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 74/255 (29%), Gaps = 27/255 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
IVITR + + + + MG + +P + L+ +++ I +SS
Sbjct: 29 IVITRSQDQQVEARRSFEMMGANVLELPALVIGPPDDWRPLDDALSELETFHWIIFSSSN 88
Query: 59 SLSTLPANF----------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + I A+G+ +A G F + +I
Sbjct: 89 GVKAVESRLSLTGRSLSSRPSGLKIAAVGQKTAKSLEIYGVEADFVPPKFVADS--LIKN 146
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-- 166
V + L + + + + + Y S+ + L N
Sbjct: 147 FPVSGLGLRMLFPRVQSGGRPILTEAFRDAGVKVVQVSAYESRCPEEIPGETVDALDNGK 206
Query: 167 ADAILFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
D I F + +V++ L + + + + + + + A
Sbjct: 207 VDVIAFTSSKTVVHTAQLMSKYFESKWQKKLLGIKLVSIGPQTSISCKKYFDRIDQEADP 266
Query: 219 PKETSLL-KLLPLRR 232
L+ + +
Sbjct: 267 HDLEGLVCACIAATK 281
>gi|116754429|ref|YP_843547.1| uroporphyrin-III C-methyltransferase [Methanosaeta thermophila PT]
gi|116665880|gb|ABK14907.1| uroporphyrinogen-III synthase / uroporphyrinogen-III
C-methyltransferase [Methanosaeta thermophila PT]
Length = 491
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 67/246 (27%), Gaps = 23/246 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL-AMQQSYGAIAITSSESL 60
I I R K+ + ++ G+IPV P + + + TSS +
Sbjct: 247 RIAILRAEKQLDVSVRLAERYGFIPVAAPSISLRALELPHDIKERIEKTECVVFTSSNGV 306
Query: 61 STLPAN-----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + AIG +A ++G + S
Sbjct: 307 EIISRRSDLVDLIQKKRVAAIGPKTAQALSERGVNVDVIPAEYSSRGL------VNALGG 360
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE-TTMKNLLQNADAILFYA 174
K ++ L + L I + + Y + + + D F +
Sbjct: 361 FKSVLLLRSAQGSPALLQGLRSSGIEVEDVPVYEVKGSEDSRLDDLIRRAELIDVFAFTS 420
Query: 175 RSSVLYFF---------SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
S+V Y A SA + + A + V + +L
Sbjct: 421 GSTVRYLMRRSEELGMEDHLRRALDSALVVAIGPPTAEVLGEFGVRVDLIPERYTFEGML 480
Query: 226 KLLPLR 231
+ R
Sbjct: 481 EA-ARR 485
>gi|224499126|ref|ZP_03667475.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes Finland 1988]
gi|284801521|ref|YP_003413386.1| hypothetical protein LM5578_1274 [Listeria monocytogenes 08-5578]
gi|284994663|ref|YP_003416431.1| hypothetical protein LM5923_1227 [Listeria monocytogenes 08-5923]
gi|284057083|gb|ADB68024.1| hypothetical protein LM5578_1274 [Listeria monocytogenes 08-5578]
gi|284060130|gb|ADB71069.1| hypothetical protein LM5923_1227 [Listeria monocytogenes 08-5923]
Length = 493
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/241 (9%), Positives = 67/241 (27%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVLDVVPTKTKEELSEVSELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + I ++I+E
Sbjct: 312 RFFDYLAQLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQE 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ G + + ++ + ++ Y + + L + + + F +
Sbjct: 372 NAS-NLIIGSIVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSS 426
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SV + + + L + ++ + + N A SL++L+
Sbjct: 427 RSVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINHFIEAESATPESLIELIQKT 486
Query: 232 R 232
+
Sbjct: 487 K 487
>gi|33239586|ref|NP_874528.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33237111|gb|AAP99180.1| Uroporphyrin-III synthase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 267
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 68/249 (27%), Gaps = 26/249 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR + + ++ G + MP + L ++ I +S+
Sbjct: 14 VVLTRSQDQQAEARILFEEQGAKVLDMPALVIGPPDDWTLLDKALLDLNNFDWIIFSSAN 73
Query: 59 SLSTLPANF----------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + ++ I A+G +A + F + + +
Sbjct: 74 GVKAVDERMKFAGSSLSNKPKNLNIAAMGRKTAEKLKLLNLIPDFVPPEFIADS--FLKH 131
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ T + LI + L + + + Y S N + N
Sbjct: 132 FPLSRTSLRVLIPRVQTGGRTLLAETLSDAGASVMEVPAYESTCPKNIPIETVNAINNGK 191
Query: 169 A--ILFYARSSVLYFFSLPLPA--------KISAAFLCLSNNIASAIPASYKNVVTVACF 218
I+F + + + L + + + + + + A
Sbjct: 192 VDLIVFSSAKTAFHTSKLLQKFFGHKWKEILLEVKIISIGPQTSINCKKYFDRLDGEAIK 251
Query: 219 PKETSLLKL 227
L++
Sbjct: 252 HDLNGLVQA 260
>gi|256085787|ref|XP_002579094.1| uroporphyrinogen-III synthase [Schistosoma mansoni]
gi|238664500|emb|CAZ35333.1| uroporphyrinogen-III synthase [Schistosoma mansoni]
Length = 250
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 88/251 (35%), Gaps = 20/251 (7%)
Query: 1 MYIVITRPIKKA------LRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAI 52
MY+V+ + + + ++ G+ ++ F ++ ++ + ++ I
Sbjct: 1 MYVVLLKSAGENATSISDDPYVQILKNSGFTVDLLETLDFEYNISNLAEYKNWRNNHSCI 60
Query: 53 AITSSESLST---LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+S S+ + F +G ++ A++ GF ++ LA I++
Sbjct: 61 IFSSPRSVIACVKAGLTGNENDLCFVVGPSTELQAKKAGFLPKGAESGDAEKLASFILKH 120
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--- 166
KP+ + G+ L + +I Y S + ++ L
Sbjct: 121 FASKLD-KPIFFPCGQVHRDTLPKVLENEGKKVNIITAYSSVENTQLHEKLRLNLCEGNP 179
Query: 167 -ADAILFYARSSVL----YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ ++F++ S V + P + + + + A+ + V VA PK
Sbjct: 180 IPECLVFFSPSGVSLTENILLTEIKPHRPNIKLVAMGRATATRLKELGLTVSAVASSPKP 239
Query: 222 TSLLKLLPLRR 232
SLL L +
Sbjct: 240 ESLLTALKQLK 250
>gi|213971709|ref|ZP_03399815.1| uroporphyrinogen-III synthetase [Pseudomonas syringae pv. tomato
T1]
gi|301386722|ref|ZP_07235140.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. tomato
Max13]
gi|302062168|ref|ZP_07253709.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. tomato K40]
gi|302130378|ref|ZP_07256368.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213923527|gb|EEB57116.1| uroporphyrinogen-III synthetase [Pseudomonas syringae pv. tomato
T1]
Length = 258
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 66/229 (28%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALARVLADAGIFSSSLPLLETESLPLTPAQRSIIFELLNYSAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L ++
Sbjct: 65 PAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLDHPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNAD 168
+ P ++ + G + L E + + + Y + T+ ++ +
Sbjct: 125 AIALPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVT 214
++ + + L + S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLAGLPLFVPSPRVASLAQAAGARNVI 233
>gi|148240557|ref|YP_001225944.1| uroporphyrinogen-III synthase [Synechococcus sp. WH 7803]
gi|147849096|emb|CAK24647.1| Uroporphyrinogen-III synthase [Synechococcus sp. WH 7803]
Length = 272
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/248 (12%), Positives = 72/248 (29%), Gaps = 23/248 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
+V+TR +++ + ++ +G + +P LA ++ + ++S+
Sbjct: 14 VVMTRAMEQQSEGRRLLEALGADVLDLPALEIGPPDHWGALDDALAEWDTFHWLIVSSAN 73
Query: 59 SLSTLPANFCRHTPIFAIGEAS-------ACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ + R A AS A++ +A ++E
Sbjct: 74 GANAVEERLQRQGKALAHRPASLKIAAVGRKTAKRLEELGSEADFVPPEFVADSLIEHFP 133
Query: 112 LFTPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NAD 168
+ ++ + E + + Y S+ + L+ + D
Sbjct: 134 VSGWGLRILLPRVQSGGRTVLGEAFGEAGARVVEVPAYESRCPQAIPAATLDALRAGSVD 193
Query: 169 AILFYARSSVLYFFSLPLPA---------KISAAFLCLSNNIASAIPASYKNVVTVACFP 219
AI F + +VL+ L + A + + + V A
Sbjct: 194 AICFTSGKTVLHTTHLLAESLGEEEATARLKRTALVSIGPQTSDRCRKLLGRVDQEAHPH 253
Query: 220 KETSLLKL 227
L+
Sbjct: 254 DLEGLVMA 261
>gi|168206339|ref|ZP_02632344.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens E str. JGS1987]
gi|170662222|gb|EDT14905.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens E str. JGS1987]
Length = 492
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 63/219 (28%), Gaps = 12/219 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR +++ + K++++G + ++ + + Y I TS +
Sbjct: 252 NICLTRSKEQSKEIKWKLKELGAEVTEINSIKIKETAYNLDEYINTLEKYDHIVFTSVNA 311
Query: 60 LSTLPANFCRH----TPIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIVEQKVLFT 114
++ ++ I A ++ + A+ + E
Sbjct: 312 VNVFFDYLVKNRVDIRKIKADFAVLGKATKKALIARGIVPSIMAHSFTAEGLFEVLKDNI 371
Query: 115 PQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ + D L ++ Y + + D +L+
Sbjct: 372 KEGEEVLIPCSSLSREYLFDNLASLGAKCHRVNIYDTICGDVKNPRA---FKEVDMVLYT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKN 211
+ S+V + + + + A+ S
Sbjct: 429 SPSTVKNMIDMIGLEALKEKVSIAIGPITLKALNESGIE 467
>gi|169347203|ref|ZP_02866142.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens C str. JGS1495]
gi|169296599|gb|EDS78730.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens C str. JGS1495]
Length = 492
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 63/219 (28%), Gaps = 12/219 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR +++ + K++++G + ++ + + Y I TS +
Sbjct: 252 NICLTRSKEQSKEIKWKLKELGAEVTEINSIKIKETAYNLDEYINTLEKYDHIVFTSVNA 311
Query: 60 LSTLPANFCRH----TPIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIVEQKVLFT 114
++ ++ I A ++ + A+ + E
Sbjct: 312 VNVFFDYLVKNRVDIRKIKADFAVLGKATKKALIARGIVPSIMAHSFTAEGLFEVLKDNI 371
Query: 115 PQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ + D L ++ Y + + D +L+
Sbjct: 372 KEGEEVLIPCSSLSREYLFDNLASLGAKCHRVNIYDTICGDVKNPRA---FKEVDMVLYT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKN 211
+ S+V + + + + A+ S
Sbjct: 429 SPSTVKNMIDMIGLEALKEKVSIAIGPITLKALNESGIE 467
>gi|110800584|ref|YP_696125.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens ATCC 13124]
gi|4239997|dbj|BAA74782.1| uroporphyrinogen III methylase [Clostridium perfringens]
gi|110675231|gb|ABG84218.1| uroporphyrinogen-III methyltransferase/synthase [Clostridium
perfringens ATCC 13124]
Length = 492
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 63/219 (28%), Gaps = 12/219 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I +TR +++ + K++++G + ++ + + Y I TS +
Sbjct: 252 NICLTRSKEQSKEIKWKLKELGAEVTEINSIKIKETAYNLDEYINTLEKYDHIVFTSVNA 311
Query: 60 LSTLPANFCRH----TPIFAIGEASACLARQKGFTQIFHGK-DNSINLAKIIVEQKVLFT 114
++ ++ I A ++ + A+ + E
Sbjct: 312 VNVFFDYLVKNRVDIRKIKADFAVLGKATKKALIARGIVPSIMAHSFTAEGLFEVLKDNI 371
Query: 115 PQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ ++ + D L ++ Y + + D +L+
Sbjct: 372 KEGEEVLIPCSSLSREYLFDNLASLGAKCHRVNIYDTICGDVKNPRA---FKEVDMVLYT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKN 211
+ S+V + + + + A+ S
Sbjct: 429 SPSTVKNMIDMIGLEALKEKVSIAIGPITLKALNESGIE 467
>gi|54298728|ref|YP_125097.1| uroporphyrinogen-III synthetase [Legionella pneumophila str. Paris]
gi|53752513|emb|CAH13945.1| Uroporphyrinogen-III synthetase [Legionella pneumophila str. Paris]
Length = 250
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 76/240 (31%), Gaps = 16/240 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I+ TRP ++A +KI + G IP+ P + + L S S+ +
Sbjct: 9 RILNTRPREQAQVLNKKIIESGGIPIDCPTMEIMASENNWINNLPDLTSVNQAIFVSANA 68
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ-----KGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + A + + F + ++ +
Sbjct: 69 VRYFMMELASKNINWLNSIRVAAIGKGTSRVLNEFNIQVSDVPELPDSEHLLTLNSLQQI 128
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILF 172
+ ++ + G+ E+YL+ L ++ Y + + +L ++ D IL
Sbjct: 129 RNQTILLVKGEGGRQLIEEYLMLKGAKLCLLSVYKRVMPTIDQEFLNSLWRDDLADIILL 188
Query: 173 YARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+ F + + L +S+ +A + ++ ++ L
Sbjct: 189 TSEQSIHNLFKMFSIEGQMWLQNKPCLVISDRLAKVASLFGIKKILIS---HPERMIGTL 245
>gi|83749207|ref|ZP_00946209.1| UROPORPHYRINOGEN-III SYNTHASE / Uroporphyrin-III
C-methyltransferase [Ralstonia solanacearum UW551]
gi|83724148|gb|EAP71324.1| UROPORPHYRINOGEN-III SYNTHASE / Uroporphyrin-III
C-methyltransferase [Ralstonia solanacearum UW551]
Length = 1065
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 70/248 (28%), Gaps = 29/248 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+V+TRP +AL +++ G + PL LA Y + S
Sbjct: 394 VVVTRPRAQALMLVAALERHGLRTLQFPLLDIAPTPNLDDLRAALADPSRYALVVFVSPN 453
Query: 59 SLSTLPA------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK-------- 104
++ A + + P+ +G ASA G H A
Sbjct: 454 AVQQAFAAMPEGFRWPQDVPVAVVGPASAQALAAHGVEPPTHSVIRPDVHADDARQDSEA 513
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS---QDIAYPETTMK 161
+ + ++ + G D L E + +R ++ Y A ++
Sbjct: 514 LYARLDPAQLSGREVLIVRGNGGREWLADRLREAGVAVRTVEAYRRSVPVPDAAAWAALR 573
Query: 162 NLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVV 213
+L A + +V SL +A I + V
Sbjct: 574 EVLAGRHAWTLTSSEAVRNLDSLARASLTAAEVDTLHAAPCFAPHARIVEQAQSLGFRDV 633
Query: 214 TVACFPKE 221
T+ +
Sbjct: 634 TLTGAGDD 641
>gi|217976205|ref|YP_002360352.1| uroporphyrinogen III synthase HEM4 [Methylocella silvestris BL2]
gi|217501581|gb|ACK48990.1| uroporphyrinogen III synthase HEM4 [Methylocella silvestris BL2]
Length = 253
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TR +A+RT K+ +G+ ++ P+ Q TS+++
Sbjct: 1 MLVLLTRAFDEAMRTAAKLTALGHHAILSPVLEMAPTG---AEWPQCVVDGALATSTQAF 57
Query: 61 STLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
L + TP+ +GE + AR++GF ++ LA ++ +
Sbjct: 58 ELLSQSGDWPSPEARRLTPLHVVGERTKAAARERGFEGRTSVAPDAKILASSLI-GALAG 116
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--IL 171
+YL G+ R E L + + V++ Y +Q + +T L++ IL
Sbjct: 117 RTPSRFVYLAGRDRKPDLEAALTDAGHSVDVVEVYAAQALDALDTEAAALIEAGQIGAIL 176
Query: 172 FYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
Y+R S F L + + +S + A+ + A+ V +A P E +L L
Sbjct: 177 HYSRRSADIFLRLAAETGLDISRIPHVAISADAAAPLKAARFPSVHIAEIPNEQGMLDAL 236
Query: 229 P 229
Sbjct: 237 Q 237
>gi|156390377|ref|XP_001635247.1| predicted protein [Nematostella vectensis]
gi|156222339|gb|EDO43184.1| predicted protein [Nematostella vectensis]
Length = 239
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 85/239 (35%), Gaps = 22/239 (9%)
Query: 3 IVITRP---IKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITS 56
+++ R K R +++ G+ +P+ F + L+ YG I +TS
Sbjct: 8 VLLLRSSSDDPKQDRYHMELRSHGFQCTSIPVLSFEFENLDKLEKMLSEPTEYGGIILTS 67
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + + ++ G + H ++ LA +I+E
Sbjct: 68 ARGVEAMEKCIEEKISLS--------AKKKLGLESVGHQAGSAEMLAPMILE--GAHPQT 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN---ADAILFY 173
KP ++ G R + +PL+ + Y + + + ++ I+F+
Sbjct: 118 KPFLFPCGNLRKETIPTEMQNAGVPLKGLQVYKTCKHTELAQNLTSHVEEKGVPSVIVFF 177
Query: 174 ARSSVLYFFSLPLP---AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ S V + SL + + + ++A+ +V VA P SL + +
Sbjct: 178 SPSGVQFVLSLLTEIFGDFSALKLVAIGATTSAAMIKHGLSVAAVAKQPSPKSLAECIS 236
>gi|126734493|ref|ZP_01750240.1| hypothetical protein RCCS2_10039 [Roseobacter sp. CCS2]
gi|126717359|gb|EBA14223.1| hypothetical protein RCCS2_10039 [Roseobacter sp. CCS2]
Length = 234
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 82/230 (35%), Gaps = 16/230 (6%)
Query: 3 IVITRPIKKALRTQEKIQKM--G-YIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++TRP ++ R K++ G ++ PL + + + AI TS+
Sbjct: 4 VILTRPKAQSARFATKLKAQWDGPLEIIIAPLIEIVPVAATCDVP-----DAIIFTSANG 58
Query: 60 LSTLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+S R + +G +A LAR GF + D +A II P
Sbjct: 59 VSASERLGLPRGLTAWCVGSKTAELARTAGFAPVVGPGDADGLVADIIAA-----KPTGA 113
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-DAILFYARSS 177
L ++ GK L I + Y + + + + + + ++ +
Sbjct: 114 LAHIRGKHARGDVSARLNAAGITCADVVVYDQRALNLTQEVKRAVAAQSLVIFPLFSPRT 173
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ P + + LS+ + SA+ +TVA P ++L
Sbjct: 174 ATIL-NGEGPFDAAVHVVALSDAVKSAVSPKVATQITVAASPDGNAMLSA 222
>gi|123965362|ref|YP_001010443.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9515]
gi|123199728|gb|ABM71336.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9515]
Length = 265
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 62/246 (25%), Gaps = 22/246 (8%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSES 59
+ITR K ++ G P + + L+ + I +SS
Sbjct: 14 IITRSKDKISDIKKLFTNEGAQIFDFPAIEVGYPDDFNPLDDALSEINDFHWIIFSSSNG 73
Query: 60 LST-------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ + + I + I +A+ ++E +
Sbjct: 74 IKFVDERLRNFNTSLKECSKKIKIAVVGEKTSLTLIELGIEADFVPPEFVAESLIENFPI 133
Query: 113 FTPQKPLIYLGGKPRNFH-FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA-- 169
++ + + D + + Y ++ A N++
Sbjct: 134 SGYGLRVLLPRVQTGGRNLIADQFRNSGSRVVEVAAYETRCPASIPKETINVITKRKVDA 193
Query: 170 ILFYARSSVLY--------FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+LF + +V F L A L + + + V A
Sbjct: 194 MLFSSGKTVSNSSFLLEKEFGKEWLTFLDDAKLLTIGPQTSKICEKFFGRVDGEAVKYTF 253
Query: 222 TSLLKL 227
LL
Sbjct: 254 EGLLDA 259
Score = 43.7 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 10/125 (8%), Positives = 27/125 (21%), Gaps = 9/125 (7%)
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNAD 168
QK +I K + + + + + +
Sbjct: 5 EFSLKQKNMIITRSKDKISDIKKLFTNEGAQIFDFPAIEVGYPDDFNPLDDALSEINDFH 64
Query: 169 AILFYARSS-------VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
I+F + + + F + + + + V
Sbjct: 65 WIIFSSSNGIKFVDERLRNFNTSLKECSKKIKIAVVGEKTSLTLIELGIEADFVPPEFVA 124
Query: 222 TSLLK 226
SL++
Sbjct: 125 ESLIE 129
>gi|148545466|ref|YP_001265568.1| uroporphyrinogen-III synthase [Pseudomonas putida F1]
gi|148509524|gb|ABQ76384.1| uroporphyrinogen-III synthase [Pseudomonas putida F1]
Length = 255
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 79/245 (32%), Gaps = 16/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
+++TRP + + + G +PL + + L + AI + S
Sbjct: 5 RLLLTRPAEDCAALAQSLAAAGVGSSCLPLLEIEPITVQAPQRLSLEGLHDFQAIIVVSK 64
Query: 58 ESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ L + F +GEA+A + + G F + + L + ++
Sbjct: 65 PAARLLLEHLAETSIQPPQRGWFTVGEATAGVLQGAGLEVSFPPRGDDSEALLALPALRQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNAD 168
L P ++ + G + L E + ++ Y AYP T+ + + +
Sbjct: 125 ALTEPAPRVLIVRGVGGRELLAERLAEQGASVEYLELYRRCLPAYPAGTLMRRIEAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ + + + + S +A A+ V T+LL
Sbjct: 185 GLVVSSGQGFEHLQRMAGADWLRLAQLPLFVPSPRVAEQAKAAGAQQVVDCRGASATALL 244
Query: 226 KLLPL 230
+
Sbjct: 245 AAVQR 249
>gi|299822783|ref|ZP_07054669.1| uroporphyrinogen-III synthase [Listeria grayi DSM 20601]
gi|299816312|gb|EFI83550.1| uroporphyrinogen-III synthase [Listeria grayi DSM 20601]
Length = 242
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 74/236 (31%), Gaps = 15/236 (6%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
V+TR + ++G V +PL + + Y I TS++++
Sbjct: 8 VLTRTAADNEKWLPYFHELGVEAVSLPLIETKALPFQIE----KEYDWIFFTSAKAIHYF 63
Query: 64 PANFCR---HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ I IGE +A + G F + E ++ K ++
Sbjct: 64 AEKYDLAVVTAKIAVIGEKTAEALIRYGRKADFEPSSYVA--ETFLEEWLPQYSADKRIL 121
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSV 178
+ L E + ID Y + A L+Q LF + S+
Sbjct: 122 FPRSSLAREVIAKTLREQGYSVEEIDIYETVIPASSSNLFAALIQTEKDFLFLFASPSAW 181
Query: 179 LYFFSLPLPAKISAAFL---CLSNNIASAIPASYKNVVTV-ACFPKETSLLKLLPL 230
F ++ S + + AI AS +V A ++++ +
Sbjct: 182 HNFEAICQTRNQSVQAWEYGSIGPITSRAIEASGCSVKYQPADTYTMEAMIQEIMR 237
Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 33/113 (29%), Gaps = 6/113 (5%)
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
K + N + Y E + + ++ + + + D I F
Sbjct: 2 KMSKTFVLTRTAADNEKWLPYFHELGVEAVSLPLIETKALPFQIE------KEYDWIFFT 55
Query: 174 ARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ ++ YF A ++A + A A+ + + L+
Sbjct: 56 SAKAIHYFAEKYDLAVVTAKIAVIGEKTAEALIRYGRKADFEPSSYVAETFLE 108
>gi|254823545|ref|ZP_05228546.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL J1-194]
gi|255521385|ref|ZP_05388622.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL J1-175]
gi|293592766|gb|EFG00527.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL J1-194]
Length = 493
Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 69/244 (28%), Gaps = 21/244 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMP---LSYFIHDRESVFLAMQQSYGAIAITSSE 58
+++ R E+I+ +G M P + + + L + TS E
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVLDVVPTKTREALIEINE---LLFTSKE 308
Query: 59 SLSTLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ + + + I ++I+E
Sbjct: 309 AVERFFDYLTKLDLDIRSLKNTHLTAIGKQTKEAFSKKGIIPDSFIKRRSTELILEHLPR 368
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ G + + ++ + ++ Y + + L + + + F
Sbjct: 369 LRKNAS-NLIIGSMVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCF 423
Query: 173 YARSSVLYFFSLP---LPAKISAA-FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ SV + A + L + ++ + + N A SL++L+
Sbjct: 424 SSSRSVQNLLDVLTTGEKAILQTKTILSIGRFTSATLASFGINNFIEAESATPESLIELI 483
Query: 229 PLRR 232
+
Sbjct: 484 QKTK 487
>gi|170742654|ref|YP_001771309.1| uroporphyrinogen III synthase HEM4 [Methylobacterium sp. 4-46]
gi|168196928|gb|ACA18875.1| Uroporphyrinogen III synthase HEM4 [Methylobacterium sp. 4-46]
Length = 262
Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 13/234 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ + RP+ RT ++ +G+ P++ P+ S + A+ +TS+ +
Sbjct: 18 RVWVARPLPAGARTAARVAALGHAPLLAPVLDLAP---SHVPPPDGRFDALILTSANAAP 74
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
L P F +G +A AR G +I ++ +L +I P L++
Sbjct: 75 ALGPAGLTGLPAFCVGARTAEAARAAGLREIREAGGDAASLVGLIT---GSLPPGAALLH 131
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSVL 179
G+ R L P+ Y ++ + + L A A L Y+R S
Sbjct: 132 AAGRERKPEPAASLAAAGFPVTTWIAYAARPLPQLPDPVAAALAEARLDAALHYSRRSAA 191
Query: 180 YFFSLPLPAK-----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
L A A LCLS + A+ + A+ VA P E +LL L
Sbjct: 192 AALGLARAAGCEAGFARLAHLCLSEDCAAPLVAAGILSHLVAAMPTEDALLSGL 245
>gi|115352518|ref|YP_774357.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia ambifaria AMMD]
gi|115282506|gb|ABI88023.1| protein of unknown function DUF513, hemX [Burkholderia ambifaria
AMMD]
Length = 655
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 68/259 (26%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ + G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSAGLSAQLAEAGCDVLEFPLIDIAPVDDPAPLDAAFAALDRYALVIFVSPNA 70
Query: 60 LSTLPANFCRHT----PIFAIGEASACLARQKGFTQIFH-------------GKDNSINL 102
+ A + P+ +G S + G H +S NL
Sbjct: 71 IDRALAQYDAIWPNALPVGVVGPGSVAALERHGIAAPAHRVIAPQAPADGGVPHYDSENL 130
Query: 103 AKIIVEQK--VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----P 156
I K ++ + G + L E + ++ Y
Sbjct: 131 FASIEAAFGGAQALAGKHVLIVRGDGGREWLAERLREAGADVTLVAAYRRVVPEPRVGAW 190
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPAS 208
E L A L + V L A A + I A
Sbjct: 191 ERVHVLLAGAPHAWLVTSSEGVRNLHELARTHLNDAEIEALKHAPLVTPHPRIEQTARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|330876445|gb|EGH10594.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 258
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 67/229 (29%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + G +PL ++ +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALATVLANAGIFSSSLPLLETEPLALTLAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L ++
Sbjct: 65 PAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLDHPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNAD 168
+ P ++ + G + L E + + Y + T+ + ++ +
Sbjct: 125 AIAIPGSRVLIMRGDEGRELLAEQLRERGAGVDYLPLYRRYLPQHAPDTLPQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVT 214
++ + + L + S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLAGLPLFVPSPRVASLAQAAGARNVI 233
>gi|332304813|ref|YP_004432664.1| Uroporphyrinogen III synthase HEM4 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172142|gb|AEE21396.1| Uroporphyrinogen III synthase HEM4 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 240
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 71/232 (30%), Gaps = 6/232 (2%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-----LAMQQSYGAIAIT 55
M ++I RP +K + + + V + L ++ LA +I +T
Sbjct: 1 MTVLIFRPEQKCATSVARFSQADISAVGVGLISTQPSEPALAKLAGSLAALAPGDSIIVT 60
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
S+ + L + + A ++ +
Sbjct: 61 STVASQLLAQRDISLPSDVHVFAVGSSTATGLRDMGYQVIVPPVPTTEGLLSLTPLSKVD 120
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + G+ +L + + + D Y+ IA P+ T + + I+ +
Sbjct: 121 GHKVVIIKGEGGRQDLARHLNQRGASVYLADIYHRIKIAPPKATQEWQAKQIRCIIATSG 180
Query: 176 SSVLYFFSLP-LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F S ++ +S N + V+ + +L++
Sbjct: 181 ELIDTAFEQFDPKWLQSLPWIVVSPRTEQIAAKHGINTIFVSDDASDQALIR 232
Score = 35.2 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Query: 161 KNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
L D+I+ + + + + ++ A+ + V V P
Sbjct: 48 LAALAPGDSIIVTSTVASQLLAQRDISLPSDVHVFAVGSSTATGLRDMGYQ-VIVPPVPT 106
Query: 221 ETSLLKLLPLRR 232
LL L PL +
Sbjct: 107 TEGLLSLTPLSK 118
>gi|289434835|ref|YP_003464707.1| hypothetical protein lse_1470 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171079|emb|CBH27621.1| hemD [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 240
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 78/234 (33%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K ++ Q + G++ +PL VF + QQ+ I TS ++
Sbjct: 4 KVVLTREASKNIKWQAYFAENGFVVDSVPLIETKPQNV-VFTSEQQNVEWIFFTSVNAVE 62
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ IGE + G + F + E + + +
Sbjct: 63 YFFKQHKVTKSYKYAVIGEKTKEKLADYGHSPSFIPTLY--QTEPFLSEWLEKYPEKTSI 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSS 177
+ ED L E + ++ Y + ++ +K L I+F + S+
Sbjct: 121 LLPKSNLSRTVMEDTLKEKGYVIFPVELYETIFPTKSKSLLKQLFTQNENQIIIFASPSA 180
Query: 178 VLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S+ K + + N AI A V A +L L+
Sbjct: 181 WKNFYSVAKNFPSQKGNWRIASIGNVTTKAIVADGYEVTYQAKTFTMKNLADLI 234
>gi|302187598|ref|ZP_07264271.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. syringae
642]
Length = 257
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 71/229 (31%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALARVLAEDGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P F++G A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPLQPWFSVGSATGQILIDYGLDTSWSEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNAD 168
+ P ++ + G + L + + + Y + + + ++ +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLRGLGVGVDYLPLYRRYLPQHAPGALPQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVT 214
++ + + L + S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLAGLPLFVPSPRVASIARAAGARTVI 233
>gi|28629133|gb|AAO49476.1|AF489105_1 uroporphyrinogen III synthase [Danio rerio]
Length = 262
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 84/257 (32%), Gaps = 31/257 (12%)
Query: 1 MYIVITR-PIK---KALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIA 53
M +++ + P + +A +++ G+ ++P F + L + +G +
Sbjct: 1 MKVLLLKEPRESESEADPYIKELASCGHTATLIPALSFRFVSLNELSERLFQPERFGGLI 60
Query: 54 ITSSESLST---------------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDN 98
TS ++ + ++ +G+A+A L G +
Sbjct: 61 FTSPRAVEAVKTSLELQKLRHQWDAVKDKWNAKSVYVVGKATASLVVDLGLRPLGEDSGT 120
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ LA +I+++ +PL + G + L IPL + Y + + +
Sbjct: 121 ADALALLILQR--ENPDIQPLFFPCGSIKREVLPTALRNSHIPLETLTVYQTSEHPDLQK 178
Query: 159 TMKNLLQNADAI---LFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKN 211
+ + +F++ S V + L F + A A+ A
Sbjct: 179 NISDYFTQQGVPACVVFFSPSGVSFCLDLLKDLSGCQLEQIKFASIGRTTADALQARGLT 238
Query: 212 VVTVACFPKETSLLKLL 228
V A P L +
Sbjct: 239 VSCCAEKPTAKHLAIAI 255
>gi|266622118|ref|ZP_06115053.1| uroporphyrinogen-III C-methyltransferase [Clostridium hathewayi DSM
13479]
gi|288866174|gb|EFC98472.1| uroporphyrinogen-III C-methyltransferase [Clostridium hathewayi DSM
13479]
Length = 504
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 71/243 (29%), Gaps = 19/243 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+ +T A + ++ +++ G + R YG I TS+
Sbjct: 255 RVAVTGTGLLAAKLRKSLEEAGASTECVLSLELESCRSGEAMKAAYERLADYGWIVFTSA 314
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ H A+G+ +A + GFT + ++ A +
Sbjct: 315 NAVREFFLGLLESGRDNRSVGHVKFAAVGKGTAKELLRYGFTTDYIPEEFCA--AALARG 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
K + + L+ + L I + Y + E + L+ AD
Sbjct: 373 LKDVVKDGERLLIPRSLKGSPELNGILDGAGIRYDDVVLYNVAERKQGEKELSEALKKAD 432
Query: 169 AILFYARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ F + S V FF +C+ + A + + A +
Sbjct: 433 YLTFASGSGVDAFFENAGEDVTALLAGIRVVCIGDITAKKLEEHGRKADVTASRFTVEGM 492
Query: 225 LKL 227
+
Sbjct: 493 TEA 495
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 20/75 (26%), Gaps = 10/75 (13%)
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVVTV 215
L + I+F + ++V FF L + F + A + +
Sbjct: 301 ERLADYGWIVFTSANAVREFFLGLLESGRDNRSVGHVKFAAVGKGTAKELLRYGFTTDYI 360
Query: 216 ACFPKETSLLKLLPL 230
E L
Sbjct: 361 P----EEFCAAALAR 371
>gi|217964298|ref|YP_002349976.1| uroporphyrinogen-III synthase [Listeria monocytogenes HCC23]
gi|217333568|gb|ACK39362.1| uroporphyrinogen-III synthase [Listeria monocytogenes HCC23]
gi|307571136|emb|CAR84315.1| hemD [Listeria monocytogenes L99]
Length = 240
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 75/234 (32%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + G+ V +PL + S+ + + +TS+ ++
Sbjct: 4 KVVLTREASKNQPWQTYFGQNGFAVVSVPLIKTRPKKISLSREQLE-AEWLFLTSANAVE 62
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
N H I IGE + + G+ F + E + +
Sbjct: 63 YFFMNQPGEAHYKIAVIGEKTREKLAEFGYKPSFVPSIYQS--EIFLEEWLNENPEKTSV 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSS 177
+ +D L E + ++ Y + + + LL + I+F + S+
Sbjct: 121 LLPQSNLSRSIIKDTLTEKGYLVHSVELYETVSPENSKIKLTELLNSNDIHIIIFASPSA 180
Query: 178 VLYFFSLPLP---AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S+ K + + AI A V L L+
Sbjct: 181 WKNFYSIAKSLPVQKEKWHIASIGSITTEAILADGWEVKYQPKTFTMKHLADLI 234
>gi|145588842|ref|YP_001155439.1| uroporphyrinogen III synthase HEM4 [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145047248|gb|ABP33875.1| Uroporphyrinogen III synthase HEM4 [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 274
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 83/262 (31%), Gaps = 39/262 (14%)
Query: 3 IVITRPIKKALRTQEKIQK---MGYIP-------VMMPLSYFIHDRE----SVFLAMQQS 48
IVITRP +A + E + K I V +PL + + + Q
Sbjct: 6 IVITRPTGQARQLIEVLTKVIEASAIAKRSLPELVSLPLLTIVPKSDEHLADSIASTLQD 65
Query: 49 YGAIAITSSESLSTLPANFCRHT--------PIFAIGEASACL------ARQKGFTQIFH 94
S ++ ++ R PI +G +S ++ T I+
Sbjct: 66 ADLAIFVSPNAVESVMRLLERDWQDFSKRIIPIGVMGGSSRLALKNHGIGQEDYPTSIYM 125
Query: 95 GKDNSINLAKII---VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
N ++ + ++ K ++ G D L + + I Y
Sbjct: 126 PSINERWDSEGLWQELQTLDWDWTHKKVVIFKGDGGREWLADTLQKAGATVEAISTYTRV 185
Query: 152 DIAYP---ETTMKNLLQNADAILFYARSSVLYFFSLPLPA----KISAAFLCLSNNIASA 204
+ + + + L + +V Y + SA+ LC +NIA A
Sbjct: 186 PLDIDNPAWQVIHEMDFSKSLWLLTSSEAVRYLGEVIRDQFPYGLESASALCPHHNIADA 245
Query: 205 IPASYKNVVTVACFPKETSLLK 226
A V + P + +L+K
Sbjct: 246 AEAIGFGEVFTSE-PGDEALIK 266
>gi|313673927|ref|YP_004052038.1| uroporphyrinogen iii synthase hem4 [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940683|gb|ADR19875.1| Uroporphyrinogen III synthase HEM4 [Calditerrivibrio nitroreducens
DSM 19672]
Length = 238
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 7/231 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I+ITR + ++ K+ P ++P+ + + + Y + +TS + +
Sbjct: 5 KILITRQPEMSVEFINKLSYNRLYPYILPMIKTVPHS---IIISEMMYDFVIVTSRNACN 61
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
+ + AI + + + II K
Sbjct: 62 YIQPFMDKLFYSRAIAVGEKTKQCMEMVGFRDVEVPKTFSQKGIINYLSGEDIKGKRFFL 121
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVL 179
G + R +L E + Y ++ I Y + + + L + F + S+
Sbjct: 122 PGAEERPDELIRFLTEKGAIVDAPTLYTTEKICYQQDYITDFLNEIHIDAVTFLSPSAAK 181
Query: 180 YFFSLPLPAKIS--AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
FFS +KI F+ + + + + + ++ LL
Sbjct: 182 GFFSQVTFSKIKKVPLFVSIGPTTHDYLMSIGIESIYPKTYFSVDGIVDLL 232
>gi|317051313|ref|YP_004112429.1| Uroporphyrinogen III synthase HEM4 [Desulfurispirillum indicum S5]
gi|316946397|gb|ADU65873.1| Uroporphyrinogen III synthase HEM4 [Desulfurispirillum indicum S5]
Length = 313
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/241 (14%), Positives = 80/241 (33%), Gaps = 17/241 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
++ TRP+ ++ ++ + G+ ++ P S L +Y I +TS E
Sbjct: 69 VINTRPVSQSFTFTRRLLEEGFRVLVAPASRTAPLSAEHQLPAALQCLGNYSHILLTSRE 128
Query: 59 SLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQK 110
+ L P+ AIG+ + + + + A+ + +
Sbjct: 129 GVEHLARMLAMANMDAASAPPVLAIGQGTRQACEARNLRVEYVADTSEAAAFARELCQHY 188
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADA 169
+ G D L H + + Y+S+ IA+P ++ + + D
Sbjct: 189 K--PSNSRFLLARGAGGREILPDTLRHHGFAVEELHLYHSEGIAHPGEFLQRTVDRKPDF 246
Query: 170 ILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
++F + + YF + I + + + + ++ A LL
Sbjct: 247 VVFTSSFAAGYFLDRVRDSGILWQVPIITIGPPTTATVKQRGYQILAQAATFDTDGLLST 306
Query: 228 L 228
L
Sbjct: 307 L 307
>gi|332029136|gb|EGI69147.1| Uroporphyrinogen-III synthase [Acromyrmex echinatior]
Length = 265
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/231 (16%), Positives = 82/231 (35%), Gaps = 20/231 (8%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSESLSTL--------- 63
+ ++ GY + F S L++ Y + +TS ++ +
Sbjct: 24 SKILESAGYNCECLQTLKFEFVNISDLRTCLSVADRYSGLILTSPRTVEAVALAVKEDTS 83
Query: 64 PANFCRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTPQKPLIY 121
+ P + +G + LAR + Q G NS LA+ I+ + KPL+Y
Sbjct: 84 ILYHWKQMPTYCVGSMTESLARNQLNLQHCVGSQSGNSKQLAEKIILDIKKDS--KPLLY 141
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARSSVLY 180
+ + + I ++ I Y + + E + +L+ +F++ S V +
Sbjct: 142 PCSEIARETISCTVRDSGISIKKIIVYRTLESETLEQELPKMLEKSPSIFVFFSPSIVEH 201
Query: 181 FFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + A+ S NV A P+ +L++ +
Sbjct: 202 ITAQLKRNFYNVKDIKAVAIGPVTKDALIDSGFNVYATANKPEPAALMQAI 252
>gi|148358524|ref|YP_001249731.1| uroporphyrinogen III methylase [Legionella pneumophila str. Corby]
gi|296108388|ref|YP_003620089.1| hypothetical protein lpa_03993 [Legionella pneumophila 2300/99
Alcoy]
gi|148280297|gb|ABQ54385.1| uroporphyrinogen III methylase [Legionella pneumophila str. Corby]
gi|295650290|gb|ADG26137.1| hypothetical protein lpa_03993 [Legionella pneumophila 2300/99
Alcoy]
Length = 250
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 76/240 (31%), Gaps = 16/240 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I+ TRP ++A +KI + G IP+ P + + L S+ +
Sbjct: 9 RILNTRPREQAQVLNKKIIESGGIPIDCPTMEIMASENNWINNLPDLTLVNQAIFVSANA 68
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ-----KGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + A + + F + ++ +
Sbjct: 69 VRYFMMELASKSINWPNSIRVAAIGKGTSRVLNEFNIQVSDIPELPDSEHLLTLNSLQQI 128
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILF 172
+ ++ + G+ E+YL+ L ++ Y + + +L ++ D IL
Sbjct: 129 RNQTILLVKGEGGRQLIEEYLMLKGAKLCLLSVYKRVMPTIDKEFLNSLWRDDLADIILL 188
Query: 173 YARSSVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S+ F + + L +S+ +A + ++ ++ L
Sbjct: 189 TSEQSIHNLFKMFSIEGQMWLQNKPCLVISDRLAKVASLFGIKKILIS---HPERMIGTL 245
>gi|192361669|ref|YP_001983839.1| uroporphyrinogen-III synthase [Cellvibrio japonicus Ueda107]
gi|190687834|gb|ACE85512.1| uroporphyrinogen-III synthase [Cellvibrio japonicus Ueda107]
Length = 277
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/253 (13%), Positives = 71/253 (28%), Gaps = 31/253 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS-------YGAIAIT 55
I+ITRP +A +++Q G+ ++ L + ++ Q+ Y
Sbjct: 8 IIITRPQAQAEPWAKQLQAQGFATRLLTLLEIMPLKDETRQRAIQNRVMDFDLYQKAIFV 67
Query: 56 SSESLSTLPANFCRHTPIFAIGEASAC---------LARQKGFTQIFHGKDNSINLAKII 106
S ++ R+ P IG T + + S+ ++
Sbjct: 68 SQNAVHQAMDWLDRYWPQLPIGIEYFAVGATTARELAVHGIPVTDLAQAESGSMTSEALL 127
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ + +I G H D L + + Y ++ T + LL +
Sbjct: 128 EAASLQQVAGEKVIIFRGLGGRGHMGDVLRARGAQVDYCELYERCLPSHAATGLHQLLAD 187
Query: 167 ADAILFYARSSVLY---------------FFSLPLPAKISAAFLCLSNNIASAIPASYKN 211
+ L+ S A L S I + +
Sbjct: 188 ITCWQARQQVMALHSGESLQHLLQLLELPLLSPLRGRLQRAWLLVPSERIRDQAQTAGFH 247
Query: 212 VVTVACFPKETSL 224
+A + ++
Sbjct: 248 RCLLAENATDAAM 260
>gi|124024306|ref|YP_001018613.1| uroporphyrinogen III synthase [Prochlorococcus marinus str. MIT
9303]
gi|123964592|gb|ABM79348.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9303]
Length = 277
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 25/247 (10%), Positives = 65/247 (26%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
I++TR ++ + ++ +G + +P + LA +++ + +S+
Sbjct: 14 IIMTRAQEQQSEARSRLHALGSNVLDLPALVIGPPDDWQPLDDALADIKTFHWLVFSSAN 73
Query: 59 SLSTLPANFCRHTPIFAIGEAS--------ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + R A + + +I
Sbjct: 74 GVRAVEERLQRIGQSLANRPKGLKLAAVGRKTAQHLEHLGAAVDFVPPNFVADSLINHFP 133
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
V K ++ + E + + Y S+ L N++
Sbjct: 134 VSGFGLKMMLPRVQSGGRTILGEAFRESGAHVIEVAAYESRCPEAIPEDTATALANSNVD 193
Query: 170 -ILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
I F + + + SL + + + + + + V A
Sbjct: 194 AIAFSSGKTAAHTASLLSHRFGSDWLQQLETVKVISIGPQTSLSCEKHFGRVDQEADPHD 253
Query: 221 ETSLLKL 227
L+
Sbjct: 254 LEGLVSA 260
>gi|194890869|ref|XP_001977398.1| GG19019 [Drosophila erecta]
gi|190649047|gb|EDV46325.1| GG19019 [Drosophila erecta]
Length = 277
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 83/247 (33%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSSE 58
++I + ++ E ++K + PV +P F + L Y I TS
Sbjct: 8 VIIFKSESESSDVYAETLEKHDFNPVFVPTLSFGFKNLEELRAKLQNPDKYAGIIFTSPR 67
Query: 59 SLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVE 108
+ + + + +A+GE + LA HGK N+ L + IV+
Sbjct: 68 CVEAVAESLNLGELPGGWKMLHNYAVGEVTHNLALSTLDQLFTHGKQTGNARALGEYIVD 127
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
PL+ G L E+ + + Y ++ ++ L+
Sbjct: 128 TFDGSRAL-PLLLPCGNLATDTLLSKLAENGFSVDACEVYETRCHPELGANVERALEIYG 186
Query: 169 AIL----FYARSS---VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F++ S +F+ + + + + A+ + V A P
Sbjct: 187 ESIEFLAFFSPSGVNCAQQYFTSRQLSMDKWKLVAIGPSTRRALESQGLKVYCTAERPTV 246
Query: 222 TSLLKLL 228
L+K+L
Sbjct: 247 EHLVKVL 253
>gi|315281975|ref|ZP_07870486.1| porphyrin biosynthesis protein HemD [Listeria marthii FSL S4-120]
gi|313614377|gb|EFR88010.1| porphyrin biosynthesis protein HemD [Listeria marthii FSL S4-120]
Length = 493
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 23/240 (9%), Positives = 70/240 (29%), Gaps = 13/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + A + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVLDVAPTKTKAELGEVSELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + ++ + + ++ + ++
Sbjct: 312 RFFGYLAALDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLVRFQI 371
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ G + ++ L ++ Y + + L++ + + F +
Sbjct: 372 NSSNLIIGSVVDTAEVSTILSEVEALEMMPLYDMRPVTERP----FELESFEQVCFSSSR 427
Query: 177 SVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
SV + + + L + ++ + + N A SL++L+ +
Sbjct: 428 SVQNLLDVLTAEEKAILQTKTILSIGRFTSATLQSFGINDFIEAETATPESLIELIQKTK 487
>gi|220913233|ref|YP_002488542.1| uroporphyrinogen III synthase HEM4 [Arthrobacter chlorophenolicus
A6]
gi|219860111|gb|ACL40453.1| Uroporphyrinogen III synthase HEM4 [Arthrobacter chlorophenolicus
A6]
Length = 285
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 74/273 (27%), Gaps = 52/273 (19%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS------YGAIAIT 55
+++TR +++ + + G PV++PL F + L + + + ++
Sbjct: 16 RVLVTRSPERSAALVQALAGAGATPVLLPLIDFERAPDQHALDVACDALAAGAFDWLVVS 75
Query: 56 SSESLSTLPANF-----------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
S+ ++ L T I AIG A+ + G
Sbjct: 76 SATTVHVLMEKAAERGLELARLVPPATRIGAIGPATRRILESHGLAVELTPAGEQSAAGL 135
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ +T ++ D L + + + Y + D +
Sbjct: 136 L-----EAWTGGGRVLLPQADIAAATLADGLRK-GSDVTAVTFYRTVDFPAAADRRLAMQ 189
Query: 165 QNA---------------------------DAILFYARSSVLYFFSLPLPAKISAAFLCL 197
A++ + S+V SL + +
Sbjct: 190 PEDGGAGQATASYTLLTPEAAAAEIAGGRISAVVAASPSAVRRIASLSPLGG--CRLVAI 247
Query: 198 SNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ A A V VA P L+ +
Sbjct: 248 GRSTADQAAALDLPVAAVADEPTPDGLVAAVVK 280
>gi|330901070|gb|EGH32489.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 257
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 70/229 (30%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESTALARVLAEDGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P F++G A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPLQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNAD 168
+ P ++ + G + L + + + Y + + ++ +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLRALGVGVDYLPLYRRYLPQHAPGALAQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
++ + + L P S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIARAAGARTVI 233
>gi|300690777|ref|YP_003751772.1| probable bifunctional: uroporphyrin-III c-methyltransferase and
uroporphyrinogen-III synthase transmembrane protein
[Ralstonia solanacearum PSI07]
gi|299077837|emb|CBJ50475.1| Probable bifunctional: uroporphyrin-III c-methyltransferase and
uroporphyrinogen-III synthase transmembrane protein
[Ralstonia solanacearum PSI07]
Length = 697
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 74/255 (29%), Gaps = 30/255 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSE 58
+V+TRP +A +++ G + PL LA Y + S
Sbjct: 24 VVVTRPRTQAPMLVAALERHGLRTLQFPLLDIAPTPNLDDLRAALADPSRYALVVFVSPN 83
Query: 59 SLSTLPA------NFCRHTPIFAIGEASACLARQK--------GFTQIFHGKDNSINLAK 104
++ + + + P+ +G ASA H + +
Sbjct: 84 AVQQAFSAMPEGFRWPQDVPVAVVGPASAQALAAHGVEPPTYRVIRPDSHADEARQDSEA 143
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS---QDIAYPETTMK 161
+ + + ++ + G D L E + +R ++ Y A ++
Sbjct: 144 LYARLDLAPLSGREMLIVRGNGGREWLADRLREAGVAVRTVEAYRRSVPVPDAATWAALR 203
Query: 162 NLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVV 213
+L A + +V SL +A I + + V
Sbjct: 204 EVLAGRHAWTLTSSEAVRNLDSLARASLTAAEVDTLHAAPCFAPHARIVEQAQSLGFHDV 263
Query: 214 TVACFPKETSLLKLL 228
T+ + LL L
Sbjct: 264 TLT-GAGDDRLLAGL 277
>gi|65301440|ref|NP_997993.2| uroporphyrinogen-III synthase [Danio rerio]
gi|62203502|gb|AAH92818.1| Uroporphyrinogen III synthase [Danio rerio]
gi|146455167|dbj|BAF62162.1| uroporphyrinogen III synthase [Danio rerio]
gi|182891594|gb|AAI64837.1| Uros protein [Danio rerio]
Length = 262
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 84/257 (32%), Gaps = 31/257 (12%)
Query: 1 MYIVITR-PIK---KALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIA 53
M +++ + P + +A +++ G+ ++P F + L + +G +
Sbjct: 1 MKVLLLKEPRESESEADPYIKELASCGHTATLIPALSFRFVSLNELSERLFQPERFGGLI 60
Query: 54 ITSSESLSTLPANF---------------CRHTPIFAIGEASACLARQKGFTQIFHGKDN 98
TS ++ + + ++ +G+A+A L G +
Sbjct: 61 FTSPRAVEAVKTSLESQKLRGKWDAVKDKWNTKSVYVVGKATASLVVDLGLRPLGEDSGT 120
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ LA +I+++ +PL + G + L IPL + Y + + +
Sbjct: 121 ADALALLILQR--ENPDIEPLFFPCGSIKREVLPTALRNSHIPLETLTVYQTSEHPDLQK 178
Query: 159 TMKNLLQNADAIL---FYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKN 211
+ + F++ S V + L F + A A+ A
Sbjct: 179 NISDYFTQQGVPACVAFFSPSGVSFCLDLLKDLSGCQLEQIKFASIGRTTADALQARGLT 238
Query: 212 VVTVACFPKETSLLKLL 228
V A P L +
Sbjct: 239 VSCCAEKPTAKHLAIAI 255
>gi|18858061|ref|NP_572507.1| CG1885 [Drosophila melanogaster]
gi|7290980|gb|AAF46419.1| CG1885 [Drosophila melanogaster]
gi|16768116|gb|AAL28277.1| GH17465p [Drosophila melanogaster]
gi|220944540|gb|ACL84813.1| CG1885-PA [synthetic construct]
gi|220954500|gb|ACL89793.1| CG1885-PA [synthetic construct]
Length = 277
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 82/247 (33%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSE 58
++I + ++ E ++K + PV +P F L Y I TS
Sbjct: 8 VIIFKSESESSDVYAETLEKHDFNPVFVPTLSFGFKNLDELRAKLQNPDKYAGIIFTSPR 67
Query: 59 SLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVE 108
+ + + + +A+GE + LA HGK N+ L IV+
Sbjct: 68 CVEAVAESLNLGELPGGWKMLHNYAVGEVTHNLALSTLDQLFTHGKQTGNARALGDYIVD 127
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
PL+ G L E+ + + Y ++ ++ L+
Sbjct: 128 TFDGSRAL-PLLLPCGNLATDTLLSKLAENGFSVDACEVYETRCHPELGANVERALEIYG 186
Query: 169 AIL----FYARSS---VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F++ S +F+ + + + + A+ + + V A P
Sbjct: 187 ESIEFLAFFSPSGVNCAQQYFTSRQLSMDKWKLVAIGPSTRRALESLGQKVYCTAERPTV 246
Query: 222 TSLLKLL 228
L+K+L
Sbjct: 247 EHLVKVL 253
>gi|218294834|ref|ZP_03495688.1| Uroporphyrinogen III synthase HEM4 [Thermus aquaticus Y51MC23]
gi|218244742|gb|EED11266.1| Uroporphyrinogen III synthase HEM4 [Thermus aquaticus Y51MC23]
Length = 225
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/231 (15%), Positives = 74/231 (32%), Gaps = 18/231 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSESLS 61
+++TR +A + +G + L + L Q +A+TS E
Sbjct: 2 VLLTRGKDRA--LLARFAALGIEAAEVALLEQVDLPALALLPERLQRADWVAVTSKEGAR 59
Query: 62 ----TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ A+GE +A + ++ G + F + F +
Sbjct: 60 RLLLAWERAKRPSLRVAAVGEGTAEVLKEGGLSPAFVPGRATAKDLA------EGFPEAQ 113
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++++ G E L+ I + + Y +++ A + LL+ A F++ S
Sbjct: 114 RVLFVAGDLAGEDLERGLLARGIAVERLPVYATRERALSPEEV-ALLERAQVAAFFSPSG 172
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F C+ + A + V A P L + +
Sbjct: 173 ARAF---ACWTDRRPRAACIGPSTAEEARRLGFS-VWEAEAPGLEGLFRAI 219
>gi|78067220|ref|YP_369989.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia sp. 383]
gi|77967965|gb|ABB09345.1| conserved hypothetical protein [Burkholderia sp. 383]
Length = 656
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 69/259 (26%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ + G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSGALASQLAEAGCDVLEFPLIDIAPVDDPAPLDAAFAALADYTLVIFVSPNA 70
Query: 60 LSTLPANFCRHT----PIFAIGEASACLARQKGFTQIFH-------------GKDNSINL 102
+ A + P+ +G S + G H +S +L
Sbjct: 71 IDRALAQYGAIWPNALPVGVVGPGSVAALERHGIAAPAHRVIAPQAPADGGVPHYDSESL 130
Query: 103 AKIIVEQK--VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY---PE 157
I K ++ + G D L E + ++ Y
Sbjct: 131 FACIETAFGGAQALAGKRVLIVRGDGGREWLADRLREAGADVTLVAAYRRVVPDPRVGAW 190
Query: 158 TTMKNLLQ-NADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPAS 208
+ LL A L + V L A A + I +
Sbjct: 191 ERVHALLHGEPHAWLVTSSEGVRNLHELARSHLNDAEIDALKHAPLVTPHPRIEQTARSL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|16803241|ref|NP_464726.1| hypothetical protein lmo1201 [Listeria monocytogenes EGD-e]
gi|47095043|ref|ZP_00232656.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes str. 1/2a F6854]
gi|224502503|ref|ZP_03670810.1| hypothetical protein LmonFR_08289 [Listeria monocytogenes FSL
R2-561]
gi|254828561|ref|ZP_05233248.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL N3-165]
gi|254898638|ref|ZP_05258562.1| hypothetical protein LmonJ_02445 [Listeria monocytogenes J0161]
gi|254911873|ref|ZP_05261885.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes J2818]
gi|254936198|ref|ZP_05267895.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes F6900]
gi|16410617|emb|CAC99279.1| lmo1201 [Listeria monocytogenes EGD-e]
gi|47016661|gb|EAL07581.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes str. 1/2a F6854]
gi|258600958|gb|EEW14283.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL N3-165]
gi|258608787|gb|EEW21395.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes F6900]
gi|293589830|gb|EFF98164.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes J2818]
Length = 493
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 66/241 (27%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVLDVAPTKTKEQLSEVSELLFTSKEAVE 311
Query: 62 TLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
R + I ++I+E
Sbjct: 312 RFFDYLAKLDLDIRSLKNSHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQK 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ +G ++ + ++ Y + + L++ + + F +
Sbjct: 372 NVSNLIIGSVVDTTEVNV-ILADVKAIEMMPLYDMRPVTERP----FDLESFEQVCFSSS 426
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SV + + + L + ++ + + N A SL++L+
Sbjct: 427 RSVQNLLDVLTIEEKAILQTKTILSIGRFTSATLASFGMNNFIEAESATPESLIELIQKT 486
Query: 232 R 232
+
Sbjct: 487 K 487
>gi|313496557|gb|ADR57923.1| HemD [Pseudomonas putida BIRD-1]
Length = 255
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 78/245 (31%), Gaps = 16/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
+++TRP + + + G +PL + + L + AI + S
Sbjct: 5 RLLLTRPAEDCAALAQSLAAAGVGSSCLPLLEIEPITVQAPQRLSLEGLHDFQAIIVVSK 64
Query: 58 ESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ L + F +GEA+A + + G F + + L + ++
Sbjct: 65 PAARLLLEHLAETSIQPPQRGWFTVGEATAGVLQGAGLEVSFPPRGDDSEALLALPALRQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNAD 168
L ++ + G + L E + ++ Y AYP T+ + + +
Sbjct: 125 ALTELAPRVLIVRGVGGRELLAERLAEQGASVEYLELYRRCLPAYPAGTLMRRIEAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ + + + + S +A A+ V T+LL
Sbjct: 185 GLVVSSGQGFEHLQQMAGADWLRLAQLPLFVPSPRVAEQAKAAGAQQVVDCRGASATALL 244
Query: 226 KLLPL 230
+
Sbjct: 245 AAVQR 249
>gi|330976468|gb|EGH76520.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 257
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 70/229 (30%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESTALARVLAEDGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P F++G A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPLQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNAD 168
+ P ++ + G + L + + + Y + + ++ +
Sbjct: 125 AIAIPGSRVLIMRGDEGRELLAEQLRGLGVGVDYLPLYRRYLPQHAPGALAQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
++ + + L P S +AS A+ V
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIARAAGARTVI 233
>gi|254577301|ref|XP_002494637.1| ZYRO0A06138p [Zygosaccharomyces rouxii]
gi|238937526|emb|CAR25704.1| ZYRO0A06138p [Zygosaccharomyces rouxii]
Length = 250
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 68/237 (28%), Gaps = 19/237 (8%)
Query: 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDRE-----SVFLAMQQSYGAIAITSSESLSTLP 64
+ + + + Q G+ PV +PL H + A + I +TS ++ L
Sbjct: 12 AQQDKYEIEFQSNGFEPVFIPLISHTHIPQGLLKLLEDDAYLKDLQDIIVTSQRTVECLY 71
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQIFHGKD-------------NSINLAKIIVEQKV 111
+ G + N L+ II+
Sbjct: 72 ESVLPQLHASTRQLFLEKTVYAVGPSTKDFLIRIGFKNVKGGEDAGNGSILSDIIISDYR 131
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ L G+ R L + I ++ + Y ++++ T + + + ++
Sbjct: 132 EQGKNSEPLLLVGEIRRDIIPKKLSSNGIQVKEVITYKTENLPDNLTRFQAMARENSWVV 191
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F++ + + + V+ P E +L+ +
Sbjct: 192 FFSPQGTEEIIESIKN-GSNHRVASIGPTTEEFLQRKGLEPDVVSLKPDERNLVNAI 247
>gi|312793379|ref|YP_004026302.1| uroporphyrin-III C-methyltransferase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180519|gb|ADQ40689.1| uroporphyrin-III C-methyltransferase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 491
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 24/233 (10%), Positives = 65/233 (27%), Gaps = 14/233 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM--QQSYGAIAITSSES 59
I ITRP + + + +G V S + RE + + Y + TS
Sbjct: 253 RICITRPKSVSGNIKNLLLSLGADVVDGCCSRLVPHREEIDKIISFLPEYDILVFTSVNG 312
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ------KGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + + + + + + +I K
Sbjct: 313 VDSFFDYLIEKKIDIRNIKGDFAAIGKKTALALQKRGFGVKYIPDEHSSDGLIRIFKNEV 372
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
K ++ + K + ++ L + I Y + P + ++D +F
Sbjct: 373 DKSKKILTVQSKIAGDYLKNALASLGFEVDTIFAYSMEFTKNPNDAV----YDSDIYVFT 428
Query: 174 ARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ +F + + + + + + + + + ++
Sbjct: 429 SSGMFRHFIECYGTDMLFNKIVISIGEHTKKTLESFGIQSIAC-DEATDEGIV 480
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 5/115 (4%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K + K + + ++ L+ + C + + L D ++F + +
Sbjct: 252 KRICITRPKSVSGNIKNLLLSLGADVVDGCCSRLVPHREEIDKIISFLPEYDILVFTSVN 311
Query: 177 SVLYFFSLPLPAKISAA-----FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
V FF + KI F + A A+ V + L++
Sbjct: 312 GVDSFFDYLIEKKIDIRNIKGDFAAIGKKTALALQKRGFGVKYIPDEHSSDGLIR 366
>gi|330501255|ref|YP_004378124.1| uroporphyrinogen-III synthase [Pseudomonas mendocina NK-01]
gi|328915541|gb|AEB56372.1| uroporphyrinogen-III synthase [Pseudomonas mendocina NK-01]
Length = 256
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/230 (13%), Positives = 66/230 (28%), Gaps = 17/230 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
+++TRP + + + G MPL E+ A Q Y A+ + S
Sbjct: 5 RLLLTRPAEDCAVLAQTLAAQGVASHCMPLLAIEALAETAEQRGTFAELQRYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ RH P F++G A+A + ++G F + +
Sbjct: 65 PAARIALQLLARHAVPTPDLPWFSVGAATAAVLAEQGLRVHFPDSGDDSEALLALPALHQ 124
Query: 112 LFTPQK--PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNA 167
++ L G+ + L + + + Y Y + +
Sbjct: 125 AIATTAAPRVLILRGEGGREFLAERLRGQGVTVDYLPLYRRVLPQYAPGELGQCVRAERL 184
Query: 168 DAILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVT 214
+ ++ + + L S +A + +V
Sbjct: 185 NGLVVSSGQGFEHLLQLAGDDWPALARLPLFVPSPRVAEQARKAGAEIVV 234
>gi|146296662|ref|YP_001180433.1| uroporphyrin-III C-methyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410238|gb|ABP67242.1| uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III
synthase [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 491
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/233 (11%), Positives = 68/233 (29%), Gaps = 14/233 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSES 59
I ITRP + + + +G V S + RE + L Q Y + TS
Sbjct: 253 RICITRPKSVSRNIKSLLFSLGADVVDGCCSKLVLHREEIDKVLNSLQEYDILVFTSVNG 312
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ------KGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + + + + + + +I +
Sbjct: 313 VDSFFDYLIEKNIDVRNIKGDFAAIGKKTALSLQKRGFRVKYIPDEHSSDGLIKIFENEV 372
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
K ++ + K + ++ L + + Y + P T+ ++D +F
Sbjct: 373 DKSKKILTVQSKNAGDYLKNSLESLGFEVDAVFAYSMEFTKNPNDTV----YDSDIFVFT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ +F +S + + + + + +T + ++
Sbjct: 429 SSGMFRHFIECYGIEVLSNKIVISIGEHTQKTLESFGIKSITC-DEATDEGIV 480
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 34/115 (29%), Gaps = 5/115 (4%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K + K + + + L + C + N LQ D ++F + +
Sbjct: 252 KRICITRPKSVSRNIKSLLFSLGADVVDGCCSKLVLHREEIDKVLNSLQEYDILVFTSVN 311
Query: 177 SVLYFFSLPLPAKISAA-----FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
V FF + I F + A ++ V + L+K
Sbjct: 312 GVDSFFDYLIEKNIDVRNIKGDFAAIGKKTALSLQKRGFRVKYIPDEHSSDGLIK 366
>gi|195042312|ref|XP_001991408.1| GH12072 [Drosophila grimshawi]
gi|193901166|gb|EDW00033.1| GH12072 [Drosophila grimshawi]
Length = 271
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 80/245 (32%), Gaps = 20/245 (8%)
Query: 3 IVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSE 58
++I + ++ E + + P+ +P F S L Y I TS
Sbjct: 8 VIIFKSESESTDVYAETLLGHNFRPLFVPTLSFGFKNLEQLSAKLQTPDKYAGIIFTSPR 67
Query: 59 SLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVE 108
+ + + + +A+GE + LA HGK N+ NL IV+
Sbjct: 68 CVEAVAESLQLAELPGGWKLLHNYAVGEVTHNLAMSTLQQLFTHGKQTGNARNLGDFIVD 127
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
PL+ G L E+ + + Y ++ M+ L+ +
Sbjct: 128 TFDGSRNL-PLLLPCGNLATDTLLSKLAENGFCVDACEVYETKCSPQLAECMERALKAEN 186
Query: 169 A--ILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ F++ S V I + + + A+ + V A P
Sbjct: 187 IEFLAFFSPSGVNCANEYFKAHNIAPNQWKLVAIGPSTRRALESLGLKVFCTAERPTVEH 246
Query: 224 LLKLL 228
L+K+L
Sbjct: 247 LVKVL 251
>gi|148244914|ref|YP_001219608.1| uroporphyrinogen-III synthetase [Candidatus Vesicomyosocius
okutanii HA]
gi|146326741|dbj|BAF61884.1| uroporphyrinogen-III synthetase [Candidatus Vesicomyosocius
okutanii HA]
Length = 248
Score = 84.5 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 75/239 (31%), Gaps = 15/239 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP + + Q+ + K G P+ P + Y I S+ ++
Sbjct: 1 MNVMLTRPALQVEKLQDMVVKSGNNPLFFPTLKLHPIDIKLEKN---HYDVIIFISANAV 57
Query: 61 STLPANFCR--HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ + A+G A+A + K N + ++ V K
Sbjct: 58 EYGLKILKNISYQQVLAVGSATAKKLSENNIIINDFPK-NKASSEALLELDSVTQLNDKT 116
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN----LLQNADAILFYA 174
++ GK + LI+ + ++ Y ++ LL I +
Sbjct: 117 ILIFRGKGGRETLKQGLIKQGNQVEYVEVYERVCCDISHLHCQSLDKFLLSREGVISITS 176
Query: 175 RSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ + + + LS I + + + V V ++ +L
Sbjct: 177 IDNMKSLIKIVNQINHIDKLKNYLLVVLSERIKIYVNSIEFDKVLVTPNTSNNGIISVL 235
>gi|126176188|ref|YP_001052337.1| uroporphyrinogen III synthase HEM4 [Shewanella baltica OS155]
gi|125999393|gb|ABN63468.1| Uroporphyrinogen III synthase HEM4 [Shewanella baltica OS155]
Length = 232
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/232 (10%), Positives = 53/232 (22%), Gaps = 16/232 (6%)
Query: 15 TQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSESLSTLPANFCRHTP 72
+ + + G + PL I S+ +++ P
Sbjct: 1 MVDALNERGIAHWVTPLLCVEATPAIATNTPHPLAHADMIICISANAVTFADNTLTTTNP 60
Query: 73 IFAIGE--ASACLARQKGFTQIF------HGKDNSINLAKIIVEQKVLFTPQKPLIYLGG 124
+ D+ ++ + + + + G
Sbjct: 61 PHKAWPPAQYFAVGHATWDALNQLGISALEAPDDCQQTEGLLTLVPLQEIKGQQITIIRG 120
Query: 125 KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFF 182
+ L LR + Y + Q I+ + +
Sbjct: 121 VGGREALAEQLAARGAHLRYWEVYQRACPPLDGQQLALQWQAFGIDTIVVTSGEVLDNLI 180
Query: 183 SLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+L S + SN + + A VT A ++L L L
Sbjct: 181 NLVPKELFAWLRSCHIIVPSNRVEAQAHAFGITQVTNANAANSKAVLNALKL 232
>gi|254796798|ref|YP_003081635.1| hypothetical protein NRI_0415 [Neorickettsia risticii str.
Illinois]
gi|254590042|gb|ACT69404.1| conserved hypothetical protein [Neorickettsia risticii str.
Illinois]
Length = 236
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/236 (16%), Positives = 82/236 (34%), Gaps = 15/236 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I+ITRP++ A+ QE++Q + ++ PL V + + ++S ++
Sbjct: 2 ILITRPVEDAIYLQERLQGLKIESLVEPLFVLQPLCFDVATLVAAK---VIVSSKNAIRA 58
Query: 63 L-PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
L + + ++A+ + A ++ F + +IY
Sbjct: 59 LTWSKASKDLQLYAMSDNIAK--FAISSGFSNVLSCGCSTAKELEAYVLSYFGKDERVIY 116
Query: 122 LGGKPRNFHFEDYLIEHKIP-LRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSV 178
L G E + CY + + L+ + ++ +
Sbjct: 117 LSGAEITRDIVSRCSEKGFRWVERRICYMMCPLKEFSNNVYVALRRKRISGVTLFSVQAA 176
Query: 179 LYFFSLPLPAKISAAF---LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ SL L I+ F +S+ IAS + + V V+ P +L+ ++
Sbjct: 177 VLCKSLFLNHGITPNFFSYFVMSHRIASTL---DCDTVYVSSVPTLDALVDVIERH 229
>gi|226939005|ref|YP_002794076.1| uroporphyrinogen-III synthase [Laribacter hongkongensis HLHK9]
gi|226713929|gb|ACO73067.1| HemD [Laribacter hongkongensis HLHK9]
Length = 248
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 13/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM--QQSYGAIAITSSESL 60
++ITRP + ++ G+ P PL + E++ + + S +
Sbjct: 6 VIITRPHEAGAPLAAALRTAGFAPFEWPLLALEPEPEALDRLPAALAGADWLVVVSPSAA 65
Query: 61 STLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ R + A+G A+A + Q + + + ++ +
Sbjct: 66 RLIAPALARLPAGLRLAAVGRATAQVLEQASGRPVLYPATGND-SEALLALPDWGALDGR 124
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYAR 175
++ G + L + + Y + + ++ L A+L +
Sbjct: 125 TVVIAKGHGGRPWLAENLARRGARVVPLALYRRRKLTPDPAALQAALAVHPQAAVLVTST 184
Query: 176 SSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ A S + IA + A V + +++ L
Sbjct: 185 EIAEAWRQAAGDALWPSLQSIMHIAPHPRIAERLTALGVMRVKTT-GAGDDAVIDAL 240
>gi|189346421|ref|YP_001942950.1| Uroporphyrinogen-III synthase [Chlorobium limicola DSM 245]
gi|189340568|gb|ACD89971.1| Uroporphyrinogen-III synthase [Chlorobium limicola DSM 245]
Length = 245
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 21/199 (10%), Positives = 52/199 (26%), Gaps = 12/199 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP +A ++++ G I + P + + TS S+
Sbjct: 4 VLVTRPKHQAHSFVNELEQYGLISTVFPTIEIRPVPGWQV-PDLSLFRGVFFTSPNSVQF 62
Query: 63 LPAN--------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + ++ E
Sbjct: 63 FMERLLAEAPAELNKLRKMRVWAVGKTTAKDLAVHGIETEPVPKIADAVTLMAEIDYEVI 122
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN---ADAIL 171
++L G + + I Y + + ++ + + +
Sbjct: 123 SNNDFLFLRGSLSLGTIPAVIAQRGGRCTEITVYENIKPSVEDSALIKQMLETGGFSCLS 182
Query: 172 FYARSSVLYFFSLPLPAKI 190
F + S+ + FF KI
Sbjct: 183 FTSPSTAINFFEAIGTTKI 201
>gi|48096010|ref|XP_392378.1| PREDICTED: uroporphyrinogen-III synthase-like [Apis mellifera]
Length = 266
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 83/247 (33%), Gaps = 20/247 (8%)
Query: 2 YIVITR---PIKKALR-TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
+V+ R + + ++ GY+ +P F S SY + +
Sbjct: 7 KVVLCRGLSEKNDSQEAYVKTLKTAGYLCDCLPTLRFEFVNISELRTCFLSSSSYYGLVL 66
Query: 55 TSSESLSTLPAN---------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
TS + + + + P++ +G A+ A+ ++ GK+
Sbjct: 67 TSRRAAEAIELSAKEDPDILLPWKTLPVYCVGPATESFAKSHLGSENCFGKEAGNAKELA 126
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + KPL+Y + E L E+ I + I Y + E + +
Sbjct: 127 ELLVASIEKKSKPLLYPCSEIGRETIEKTLNENDIKIHKIVVYKTLASKTLEHDLLKFMD 186
Query: 166 N-ADAILFYARSSVLYFFSLPLP---AKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
N +F++ S+V Y +L + + + A+ + V A P
Sbjct: 187 NVPKIFIFFSPSTVEYIVTLLKKKSYDLNNIKAVAIGPVTRQALLDAGLKVFATANKPDP 246
Query: 222 TSLLKLL 228
SLL +
Sbjct: 247 VSLLDAI 253
>gi|158297115|ref|XP_317395.4| AGAP008064-PA [Anopheles gambiae str. PEST]
gi|157015040|gb|EAA12237.4| AGAP008064-PA [Anopheles gambiae str. PEST]
Length = 264
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 80/256 (31%), Gaps = 28/256 (10%)
Query: 1 MY--IVITRPI-KKALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAI 54
M +VI + + A ++K GY PV +P F V L Y +
Sbjct: 5 MRKVVVILKSESENADNYGTLLEKHGYEPVFIPTLDFSFKNLDVLRDRLLSPYKYSGLIF 64
Query: 55 TSSESLSTLPANFCRHTPIFAIGEA----------SACLARQKGFTQIFHGKDNSINLAK 104
TS S++ + + + + R N+ NLA
Sbjct: 65 TSPRSITAVRDALEGQRKLKDDWKTLDNYSVGETSRELIQRTLDLDTKGQHSGNASNLAD 124
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE------- 157
I T P ++ G + ++ L E+ L ++ Y + E
Sbjct: 125 FIKTDLYNKTITMPFLFPCGNLKQDVLQNKLSEYGYSLDSVEVYETVPHRDLERNLVALF 184
Query: 158 --TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNV 212
K + D++LF++ S + Y + +I + + + AI V
Sbjct: 185 AGEREKEGDRTIDSLLFFSPSGINYCAHVFEKHRIDLTGKRIIAIGPSTKKAIENKGITV 244
Query: 213 VTVACFPKETSLLKLL 228
A P ++ L
Sbjct: 245 HRTAEKPSPDYVVGAL 260
>gi|238765354|ref|ZP_04626279.1| Uroporphyrinogen-III synthase [Yersinia kristensenii ATCC 33638]
gi|238696441|gb|EEP89233.1| Uroporphyrinogen-III synthase [Yersinia kristensenii ATCC 33638]
Length = 219
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/216 (11%), Positives = 59/216 (27%), Gaps = 17/216 (7%)
Query: 31 LSYFIH----DRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIG------EAS 80
+ F + L Q+ + S ++ R+ + +
Sbjct: 1 MIDFSPGGDLPKLPALLQDMQAGDLVFALSQNAVRYANPLLKRNNLSWPAQLSYYAIGRN 60
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
LA ++ + K + L G + L E
Sbjct: 61 TALALHTASRLHVTFPPTGETSEMLLSLPDLQKLAGKKALLLRGNGGRELLGESLTERGA 120
Query: 141 PLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYARSSVLYFFSLPLP-----AKISAA 193
+ +CY I Y + Q D ++ + + ++L +
Sbjct: 121 TVTFCECYQRSPIFYDGSEQSAHWQRAGVDILVVTSGEMLQQIYTLVPDYYRSSWLLRCR 180
Query: 194 FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ +S+ +A+ + + VA +L++ L
Sbjct: 181 LVVVSDRLATLAAQMGWSHIRVAENADNDALIRALQ 216
>gi|56757689|gb|AAW26987.1| SJCHGC05188 protein [Schistosoma japonicum]
gi|226484850|emb|CAX74334.1| uroporphyrinogen III synthase [Schistosoma japonicum]
Length = 250
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 89/251 (35%), Gaps = 20/251 (7%)
Query: 1 MYIVITRPIKKA------LRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAI 52
MY+V+ + + + K G+ ++ F ++ ++ + ++ I
Sbjct: 1 MYVVLLKSAGDNTTSINDDPYVQILAKSGFNVNLLETLDFEYNTSNLAEYKNWRNNHSCI 60
Query: 53 AITSSESLSTLPA---NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+S ++ + + F +G ++ A++ GF+ +++ LA I++
Sbjct: 61 VFSSPRAVISYVKAGLTGNENDLCFVVGPSTELQAKKAGFSPKGSDSGDAVKLADFILKH 120
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--- 166
KP+ + G+ L + + Y S + ++ L
Sbjct: 121 YSSKLD-KPIFFPSGQVHLDTLPKVLENAGKKVNTVVAYSSVENTQLHEKLRLNLCEGNP 179
Query: 167 -ADAILFYARSSV----LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ +++++ S V + P + + + + AS + + VA PK
Sbjct: 180 IPECLVYFSPSGVSLTEKILITEIKPHRPNIKLVAMGRATASRLKELGLTISAVASSPKP 239
Query: 222 TSLLKLLPLRR 232
SLL + +
Sbjct: 240 ESLLAAVQKLK 250
>gi|221211568|ref|ZP_03584547.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia multivorans CGD1]
gi|221168929|gb|EEE01397.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia multivorans CGD1]
Length = 656
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/259 (11%), Positives = 62/259 (23%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSAGLAAQLADAGCDVLEFPLIDIAPVDDPAPLAAAFAALADYALVIFVSPNA 70
Query: 60 LSTLPANFCRHTPI-----------------FAIGEASACLARQKGFTQIFHGKDNSINL 102
+ A + P I + + + + +S L
Sbjct: 71 IDRALAQYGAIWPNALPVGVVGPGSVAALERHGIAPPAYRVIAPQPGSDGSAPHYDSEGL 130
Query: 103 AKIIV--EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
I K ++ + G D L E + ++ Y
Sbjct: 131 FASIEAAFGGAAALAGKRVLIVRGDGGREWLADRLREAGADVTLVAAYRRVVPEPRIGMW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L + I A
Sbjct: 191 ERVHALLGGEPHAWLVTSSEGVRNLHELARAHLNDTEIEALKHAPLVTPHPRIEQTARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|106364200|dbj|BAE95178.1| uroporphyrinogen III synthase [Danio rerio]
Length = 262
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/255 (13%), Positives = 75/255 (29%), Gaps = 27/255 (10%)
Query: 1 MYIVITR-PIK---KALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIA 53
M +++ + P + +A +++ G+ ++P F + L + +G +
Sbjct: 1 MKVLLLKEPRESESEADPYIKELASCGHTATLIPALSFRFVSLNELSERLFQPERFGGLI 60
Query: 54 ITSSESLST-------------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI 100
TS ++ A + A + G+D+
Sbjct: 61 FTSPRAVEAVKTSLESQKLRRKWDAVKDKWNTKSVYVVGKATASLVVDLGLRPLGEDSGT 120
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
A ++ + +PL + G + L IPL + Y + + + +
Sbjct: 121 ADALTLLILQRENPDIEPLFFPCGSIKREVLPTALRNSHIPLETLTVYQTSEHPDLQKNI 180
Query: 161 KNLLQNADAIL---FYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVV 213
+ F++ S V + L F + A A+ A V
Sbjct: 181 SDYFTQQGVPACVAFFSPSGVSFCLDLLKDLSGCQLEQIKFASIGRTTADALQARGLTVS 240
Query: 214 TVACFPKETSLLKLL 228
A P L +
Sbjct: 241 CCAEKPTAKHLAIAI 255
>gi|148643564|ref|YP_001274077.1| uroporphyrinogen III synthase, HemD [Methanobrevibacter smithii
ATCC 35061]
gi|222444939|ref|ZP_03607454.1| hypothetical protein METSMIALI_00555 [Methanobrevibacter smithii
DSM 2375]
gi|261350488|ref|ZP_05975905.1| uroporphyrinogen-III synthase [Methanobrevibacter smithii DSM 2374]
gi|148552581|gb|ABQ87709.1| uroporphyrinogen III synthase, HemD [Methanobrevibacter smithii
ATCC 35061]
gi|222434504|gb|EEE41669.1| hypothetical protein METSMIALI_00555 [Methanobrevibacter smithii
DSM 2375]
gi|288861270|gb|EFC93568.1| uroporphyrinogen-III synthase [Methanobrevibacter smithii DSM 2374]
Length = 257
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 79/245 (32%), Gaps = 22/245 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY---GAIAITSSES 59
+ ITRP ++ + ++++G V+ P + + I TS +
Sbjct: 6 VAITRPADRSKAACKIVEELGGQYVLAPTLDLKPVNSESLKNLIANKDLLDWIVFTSPTT 65
Query: 60 LSTLPANFCRH-----TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+++L + + IG + +A ++G +D + ++ E +
Sbjct: 66 ITSLNLFYPDFLKNLDCKVAVIGNKTGKIAGEQGVKVDLIPEDFTA--EGLLEEFEKRNI 123
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI--AYPETTMKNLLQNADA--I 170
+ + + L + + V + Y S + ++N + I
Sbjct: 124 TNQTIGIPRTASARPVLPEGLEKLNNKVIVAEAYKSLFPMDEDKINDLIAKIENNEIDAI 183
Query: 171 LFYARSSVLYFFSLPLPAKI-------SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F + +V FF + + + +C+ + N +
Sbjct: 184 TFTSPLTVTNFFKISKNKEKLADLLSNNLLTVCIGPITGKILDQYNINYIY-PDTYTVRD 242
Query: 224 LLKLL 228
+++LL
Sbjct: 243 MMELL 247
>gi|197106865|ref|YP_002132242.1| uroporphyrinogen-III synthase [Phenylobacterium zucineum HLK1]
gi|196480285|gb|ACG79813.1| uroporphyrinogen-III synthase [Phenylobacterium zucineum HLK1]
Length = 234
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 90/232 (38%), Gaps = 7/232 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I ITR A T E+++ +G+ V+ PL + A+A TS+ +
Sbjct: 7 RIWITRAQPGADATAERVRALGHEAVVAPLLAVRVLPD--VEVDLTGVAALAFTSANGVR 64
Query: 62 TL-PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
A R+ +FA+G A+A ARQ GF + + LA+ I ++ ++
Sbjct: 65 AFADACGERNLRVFAVGAATAQAARQAGFRSVLSADGDVEALAEGIGIRRGELK--GAVL 122
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ G L +H + R + Y + +A + L ++DA L ++ +
Sbjct: 123 HPGAAEPAGDLAGALEKHGVEARRLVLYETAPVALSDE-AAEALVHSDAALLHSPRAAQV 181
Query: 181 FFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ L LS + + + T FP E +LL L+ R
Sbjct: 182 LAKVLKAHPAPELRALGLSKAVIKPLARTPLAAKTYPPFPLEAALLNLIDRR 233
>gi|153004242|ref|YP_001378567.1| uroporphyrinogen III synthase HEM4 [Anaeromyxobacter sp. Fw109-5]
gi|152027815|gb|ABS25583.1| Uroporphyrinogen III synthase HEM4 [Anaeromyxobacter sp. Fw109-5]
Length = 258
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 55/245 (22%), Gaps = 16/245 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI----HDRESVFLAMQQSYGAIAITSSE 58
+V+TR +++ +G +P F L + TS+
Sbjct: 10 VVVTRGKGGEDTLSARLRALGAAVREVPSIAFADPADPGPLDAALRALDRFEWAVFTSAT 69
Query: 59 SLSTLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ A A A + +
Sbjct: 70 AVDRTVARLRALGLDVAALARLRLAAVGPATAERLAGVVREPDLVPGEAKGDALARALAP 129
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNADA 169
+P+++ L+ L ++ Y + + DA
Sbjct: 130 HVSGRPVLFPRPAEGRPETVAGLLAAGADLTGVEAYRTVPAPASDIAPLGDWLARGEVDA 189
Query: 170 ILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F + S+V + A A+ L +
Sbjct: 190 VAFASPSAVRAVTGALGERAALLRGVLLAAIGPTTAEALREQGLEAGVQPERYTGADLAE 249
Query: 227 LLPLR 231
+ +R
Sbjct: 250 AVAVR 254
>gi|154493396|ref|ZP_02032716.1| hypothetical protein PARMER_02733 [Parabacteroides merdae ATCC
43184]
gi|218258720|ref|ZP_03475029.1| hypothetical protein PRABACTJOHN_00684 [Parabacteroides johnsonii
DSM 18315]
gi|154086606|gb|EDN85651.1| hypothetical protein PARMER_02733 [Parabacteroides merdae ATCC
43184]
gi|218225246|gb|EEC97896.1| hypothetical protein PRABACTJOHN_00684 [Parabacteroides johnsonii
DSM 18315]
Length = 257
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 63/242 (26%), Gaps = 18/242 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ T+
Sbjct: 7 KLLVSQPKPASEKSPYFDIAEKYGVEIDFRPFIKVEPLSSKEFRQQKISILDHTAVVFTA 66
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + +V
Sbjct: 67 RTAIDHFFHLCEELRVAIPETMKYFCMTEAIAVYLQKYIVYRKRKIFFGQTGKLDDLVTV 126
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + L KI Y + K+ + D
Sbjct: 127 IGKHAK-EKYLVPVSDVHKDDLLTMLEAKKISFTKAVMYRTV----SNDFSKDEKFDYDM 181
Query: 170 ILFYARSSVLYFFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ S + + C A A+ + + A P+ S+ L
Sbjct: 182 LVFFSPSGISSLLKNFPNFKQEDIKIGCFGPTTAKAVKEAGLRLDVEAPTPEAPSMTAAL 241
Query: 229 PL 230
L
Sbjct: 242 EL 243
>gi|313624085|gb|EFR94166.1| porphyrin biosynthesis protein HemD [Listeria innocua FSL J1-023]
Length = 493
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 67/241 (27%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R EKI+ +G M P + + A + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEKIRDLGGEVTMYPNIQVLDILPTKTKAELCETSELIFTSKEAVE 311
Query: 62 TLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
R + I ++I+E F
Sbjct: 312 RFFDYLATLELDIRSLKNAHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHIARFQK 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ +G ++ ++ Y + + L++ + I F +
Sbjct: 372 NASNLIIGSVVDTAE-VSAILSAVKATEMMPLYDMRPVTERP----FDLESFEQICFSSS 426
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SV + + + L + ++ + + N A SL++L+
Sbjct: 427 RSVQNLLDVLTTEEKAILQTKTILSIGRFTSATLQSFGINEFEEAENATPESLIELIQKT 486
Query: 232 R 232
+
Sbjct: 487 K 487
>gi|254465746|ref|ZP_05079157.1| uroporphyrinogen-III synthase [Rhodobacterales bacterium Y4I]
gi|206686654|gb|EDZ47136.1| uroporphyrinogen-III synthase [Rhodobacterales bacterium Y4I]
Length = 241
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 69/221 (31%), Gaps = 13/221 (5%)
Query: 3 IVITRPIKKALRTQEKI---QKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++TRP+ A R + + G + PL + + TS+
Sbjct: 4 LLMTRPLAAAERFVAVLPEAARAGLQVIFAPLMEIQA---AQAPVQLDGMEGVIFTSANG 60
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ P + +GE +A A G+ G A +V + P+ PL
Sbjct: 61 VEIASRETAARLPAYCVGERTAQAAAASGWRASCLGHC-----ADELVAAILGQRPEAPL 115
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSV 178
++L G L I Y + L D I+ ++ S
Sbjct: 116 LHLRGAHARGDIAGRLTRGGIACHEQILYDQVLLPLTGEAQALLAAQTDVIVPLFSPRSA 175
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+F L A + LS +A + + V+ P
Sbjct: 176 RHFAELCGDAA-HLHLIALSPAVAEPLKGLKCRTLRVSKTP 215
>gi|40062531|gb|AAR37476.1| uroporphyrinogen-III synthase [uncultured marine bacterium 106]
Length = 275
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 67/248 (27%), Gaps = 23/248 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
++TR ++ G + ++ I TS
Sbjct: 18 RFLVTRLDSTESSLSGMLESQGASVLTAQMTQIIPTESWESFDETVQQISKIDWAVFTSR 77
Query: 58 ESLSTL----------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ +G+A+A + G T + +I
Sbjct: 78 NGVTHCLSRLNDLEVSAQQLFSSIKTACVGQATASVLTDNGITPELVPEHFQS--EGLIY 135
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
K +K + + +D L + + + Y + +A T + L+
Sbjct: 136 AFKQHDLFEKRCWLIQAESPRKILQDSLQKMGAQIILTPVYRNVPVAGDYTFLLTELEQQ 195
Query: 168 --DAILFYARSSVLYFFSLPLPAKISA-----AFLCLSNNIASAIPASYKNVVTVACFPK 220
D ILF + S+V F + + CL A A +V
Sbjct: 196 KLDWILFASPSAVQNFHQILPSGFWESLAAEPKIACLGKITAKAARDFGWSVQVAPNIQD 255
Query: 221 ETSLLKLL 228
L++ L
Sbjct: 256 FQHLVQSL 263
>gi|83816546|ref|YP_445674.1| uroporphyrinogen-III synthase [Salinibacter ruber DSM 13855]
gi|83757940|gb|ABC46053.1| uroporphyrinogen-III synthase [Salinibacter ruber DSM 13855]
Length = 262
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 77/242 (31%), Gaps = 21/242 (8%)
Query: 3 IVITRPIKKA--LRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSS 57
+++ R R + +++ G V P+ F R++ LA Y + TS
Sbjct: 22 VILLRSADDEAPDRYRAALREAGLRAVCEPVLAFTFPRQAQLRDRLAAPDPYAGLLATSP 81
Query: 58 ESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ L F +A+G +A R G + + A +
Sbjct: 82 RATVALEQVFASHEALADGWADRLAYAVGPKTAARLRALGLR----ARGDDTGTADALAA 137
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ V P PL++L G R + L ++ + Y + + + A
Sbjct: 138 RIVKDDPDAPLLFLSGNRRRETLPEALRAAEVRFDELVVYETHARTDLDVPAR---GRAS 194
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ S + + + A A+ V VA P L+ L
Sbjct: 195 WLVFFSPSGLEAVTRAEGVDVQAHRLAAIGPTTAEALEGDGHAVEAVADEPSPDGLVAAL 254
Query: 229 PL 230
Sbjct: 255 QR 256
>gi|294507566|ref|YP_003571624.1| Uroporphyrinogen-III synthase [Salinibacter ruber M8]
gi|294343894|emb|CBH24672.1| Uroporphyrinogen-III synthase [Salinibacter ruber M8]
Length = 247
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 76/242 (31%), Gaps = 21/242 (8%)
Query: 3 IVITRPIKKA--LRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSS 57
+++ R R + ++ G V P+ F R++ LA Y + TS
Sbjct: 7 VILLRSADDEAPDRYRAAFREAGLRAVCEPVLAFTFPRQAKLRDRLAAPDPYAGLLATSP 66
Query: 58 ESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ L F +A+G +A R G + + A +
Sbjct: 67 RATVALEQVFASHEALADGWADRLAYAVGPKTAARLRALGLR----ARGDDTGTADALAA 122
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ V P PL++L G R + L ++ + Y + + + A
Sbjct: 123 RIVKDDPDAPLLFLSGNRRRETLPEALRAAEVRFDELVVYETHARTDLDVPAR---GRAS 179
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ S + + + A A+ V VA P L+ L
Sbjct: 180 WLVFFSPSGLEAVTRAEGVDVQAHRLAAIGPTTAEALEGDGHAVEAVADEPSPDGLVAAL 239
Query: 229 PL 230
Sbjct: 240 QR 241
>gi|297622475|ref|YP_003703909.1| Uroporphyrinogen III synthase HEM4 [Truepera radiovictrix DSM
17093]
gi|297163655|gb|ADI13366.1| Uroporphyrinogen III synthase HEM4 [Truepera radiovictrix DSM
17093]
Length = 244
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 64/231 (27%), Gaps = 8/231 (3%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV-FLAMQQSYGAIAITSSESLS 61
+++T + E + G+ PV +PL S + TS +++
Sbjct: 5 VLLTHAEGRLEGLAEALAARGFQPVHLPLIATRPLPVSARAARELLGCDWLLFTSRSAVA 64
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK--DNSINLAKIIVEQKVLFTPQKPL 119
A A ++ + + N ++ +P +
Sbjct: 65 AWCALGLPLAGARPRLGAVGEATARELAAHGGRAQLVGDPPNAEGLLARFVERVSPPARV 124
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ L + + Y + A+P+T + + +S
Sbjct: 125 GLPCALDALPTLPEGLARAGFAVTRLPLYETVARAWPDTLTLGGAETTIIV----LASPS 180
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+LP A + L + A+ A A P + + + +
Sbjct: 181 AAAALPQTVGERARLVALGPSTERALAARGWRACR-APTPDVSGVTEAVLR 230
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 33/110 (30%), Gaps = 2/110 (1%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + R + L + ++ + + L D +LF +RS+
Sbjct: 4 TVLLTHAEGRLEGLAEALAARGFQPVHLPLIATRPLPVSARAARE-LLGCDWLLFTSRSA 62
Query: 178 VLYFFSL-PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
V + +L A + A + A V P LL
Sbjct: 63 VAAWCALGLPLAGARPRLGAVGEATARELAAHGGRAQLVGDPPNAEGLLA 112
>gi|225850649|ref|YP_002730883.1| uroporphyrinogen-III synthase [Persephonella marina EX-H1]
gi|225646264|gb|ACO04450.1| uroporphyrinogen-III synthase [Persephonella marina EX-H1]
Length = 233
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 69/235 (29%), Gaps = 20/235 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I+IT+ K+ + E ++ + + P I + + + TS ++
Sbjct: 3 NILITKSEKELKK-IEAVKNIRIDIIPFPAIKTIPLDFDI---KTEDFDIFVFTSVNAVK 58
Query: 62 TLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
I A+G+ + + GF I + + ++ K
Sbjct: 59 YFFEKIEPERLEGKQIIAVGDKTKAELEKIGFKNIKTPQI--QSSEGLLELLSNRNYKDK 116
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ-DIAYPETTMKNLLQNADA--ILFYA 174
+ K L + +I Y + +I +K + + +F +
Sbjct: 117 KIALPRAKKGIDLLIKNL----DNVTLIPVYETVLNIPENVDKVKEMFEKKLVDFAVFTS 172
Query: 175 RSSVLYFFSLPLP---AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V F + + + + + V P +++K
Sbjct: 173 PSNVENFLKIFEKGLDYLKQTKVVPIGKTTGKKLKSLGIEPFFVPEKPSIENIIK 227
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Query: 152 DIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYK 210
I ++ D +F + ++V YFF P ++ + + + + +
Sbjct: 31 AIKTIPLDFDIKTEDFDIFVFTSVNAVKYFFEKIEPERLEGKQIIAVGDKTKAELEKIGF 90
Query: 211 NVVTVACFPKETSLLKLLPLR 231
+ LL+LL R
Sbjct: 91 KNIKTPQIQSSEGLLELLSNR 111
>gi|238750674|ref|ZP_04612173.1| Uroporphyrinogen-III synthase [Yersinia rohdei ATCC 43380]
gi|238711064|gb|EEQ03283.1| Uroporphyrinogen-III synthase [Yersinia rohdei ATCC 43380]
Length = 207
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 56/203 (27%), Gaps = 13/203 (6%)
Query: 40 SVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIG------EASACLARQKGFTQIF 93
L Q+ + S ++ R+ ++ + LA
Sbjct: 2 PELLQDMQAGDLVFALSQNAVRYANPLLKRNNLLWPSQLSYYAIGRNTALALHTASRLHV 61
Query: 94 HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
++ + K + L G + L E + +CY I
Sbjct: 62 TFPPTGETSEMLLSLPDLQNLSGKKALLLRGNGGRELLGESLAERGATVTFCECYQRSPI 121
Query: 154 AYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIP 206
Y + Q + ++ + + ++L + + +S +A+
Sbjct: 122 FYDGSEQSAHWQRSGVDTLVVTSGEMLQQIYTLVPDYYRSSWLLRCRLVVVSERLAALAA 181
Query: 207 ASYKNVVTVACFPKETSLLKLLP 229
+ + VA +L++ L
Sbjct: 182 QMGWSDIRVAESADNDALIRALQ 204
>gi|222529190|ref|YP_002573072.1| uroporphyrin-III C-methyltransferase [Caldicellulosiruptor bescii
DSM 6725]
gi|222456037|gb|ACM60299.1| uroporphyrin-III C-methyltransferase [Caldicellulosiruptor bescii
DSM 6725]
Length = 491
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/233 (9%), Positives = 63/233 (27%), Gaps = 14/233 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPV--MMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I ITRP + + + +G V + L Y + TS
Sbjct: 253 RICITRPKSVSRNIKSLLFSLGADVVDGCCSKLVLHREEIDKILNSLPEYDILVFTSVNG 312
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ------KGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + + + + + + +I +
Sbjct: 313 VDSFFDYLTEKNIDVRNIKGDFAAIGKKTALSLQKRGFGVKYIPDEHSSDGLIKIFENEV 372
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
K ++ + K + ++ L + I Y + P + ++D +F
Sbjct: 373 DKSKKILTVQSKNAGDYLKNSLESLGFEVDTIFAYSMEFTKNPNDAV----YDSDIFVFT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ +F +S + + + + + + ++ + ++
Sbjct: 429 SSGMFRHFIECYGVEVLSNKIVISIGEHTQKTLESFGIKSI-ISNEATDEGIV 480
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 32/115 (27%), Gaps = 5/115 (4%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K + K + + + L + C + N L D ++F + +
Sbjct: 252 KRICITRPKSVSRNIKSLLFSLGADVVDGCCSKLVLHREEIDKILNSLPEYDILVFTSVN 311
Query: 177 SVLYFFSLPLPAKISAA-----FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
V FF I F + A ++ V + L+K
Sbjct: 312 GVDSFFDYLTEKNIDVRNIKGDFAAIGKKTALSLQKRGFGVKYIPDEHSSDGLIK 366
>gi|161524049|ref|YP_001579061.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia multivorans ATCC
17616]
gi|189351190|ref|YP_001946818.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia multivorans ATCC
17616]
gi|160341478|gb|ABX14564.1| protein of unknown function DUF513 hemX [Burkholderia multivorans
ATCC 17616]
gi|189335212|dbj|BAG44282.1| uroporphyrin-III C-methyltransferase [Burkholderia multivorans ATCC
17616]
Length = 656
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 63/259 (24%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSAGLAAQLADAGCDVLEFPLIDIAPVDDPAPLAAAFAALADYALVIFVSPNA 70
Query: 60 LSTLPANFCRHTPI-----------------FAIGEASACLARQKGFTQIFHGKDNSINL 102
+ A + P I + + + + +S L
Sbjct: 71 IDRALAQYGAIWPNALPVGVVGPGSVAALERHGIAPPAYRVIAPQPGSDGSAPHYDSEGL 130
Query: 103 AKIIV--EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
I K ++ + G D L E + ++ Y T
Sbjct: 131 FASIEAAFGGAAALAGKRVLIVRGDGGREWLADRLREAGADVTLVAAYRRVVPEPRIGTW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L + I A
Sbjct: 191 ERVHALLGGEPHAWLVTSSEGVRNLHELARAHLNDTEIEALKHAPLVTPHPRIEQTARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|16800233|ref|NP_470501.1| hypothetical protein lin1164 [Listeria innocua Clip11262]
gi|16413623|emb|CAC96395.1| lin1164 [Listeria innocua Clip11262]
Length = 493
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 67/241 (27%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R EKI+ +G M P + + A + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEKIRDLGGEVTMYPNIQVLDILPTKTKAELCETSELLFTSKEAVE 311
Query: 62 TLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
R + I ++I+E F
Sbjct: 312 RFFDYLATLELDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHIARFQK 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ +G ++ ++ Y + + L++ + I F +
Sbjct: 372 NASNLIIGSVVDTAE-VSAILSEVKTTEMMPLYDMRPVTERP----FDLESFEQICFSSS 426
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SV + + + L + ++ + + N A SL++L+
Sbjct: 427 RSVQNLLDVLTTEEKAILQTKTILSIGRFTSATLQSFGINEFEEAENATPESLIELIQKT 486
Query: 232 R 232
+
Sbjct: 487 K 487
>gi|269791661|ref|YP_003316565.1| uroporphyrin-III C-methyltransferase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099296|gb|ACZ18283.1| uroporphyrin-III C-methyltransferase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 494
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/238 (12%), Positives = 65/238 (27%), Gaps = 10/238 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSESLS 61
+ + RP+ + +T +++ +G +PL LA + + TS
Sbjct: 247 VAVCRPMPEGYQTARRLEALGADAFTLPLLEVRPTASREELLASLEGADTVVFTSPRGPK 306
Query: 62 TLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
AIGE + + G + ++ V P +
Sbjct: 307 VFRDLVMDLRLLRCRTVAIGEGTRRSLEEMGIGVDLMPERADSRSLAELLVSCVR--PGE 364
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM---KNLLQNADAILFYA 174
+++L + + + + + Y P + A++F +
Sbjct: 365 RILFLRNRRCSPLPVEAVRRAGALALELPIYEMVPRGLPWRELILEHWQDTRPHAVVFGS 424
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ F P A + A ++ V L+ L R
Sbjct: 425 AALAEAFADEFGPLPAGAVPVAWGEECAKRCGELFRRRGVVMASQDLDGLVSALLEIR 482
>gi|78044513|ref|YP_361204.1| uroporphyrinogen III synthase/methyltransferase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996628|gb|ABB15527.1| uroporphyrinogen III synthase/methyltransferase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 500
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 67/241 (27%), Gaps = 18/241 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE------SVFLAMQQSYGAIAIT 55
I++T+ +++++G +P + + L Y I T
Sbjct: 255 RILVTQSSNSGKLLACRLKELGAEVWHLP--QVEYLKPESYREVDRELQRLNEYKYILFT 312
Query: 56 SSESLSTLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
S + + I + + I L + +V+
Sbjct: 313 SPNGVEFFLNRLKCLELSIDALPEIIAIGEKTKKALENSGINVAHKTDRFLPREVVKFIA 372
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA-- 169
I + E L E ++P++ + Y + + L+
Sbjct: 373 GRLQDGEKILFPKSEKATILELKLREERLPVKYLPVYKAVRAKVEADHLFELIDGRKIDF 432
Query: 170 ILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
I F + ++V FF K + + + + I + A P +L
Sbjct: 433 ITFVSPAAVNNFFESLTDEKRERLAEIKMVSMGLSTTAEIKKYGDFEILEAKRPGVDGIL 492
Query: 226 K 226
+
Sbjct: 493 E 493
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 17/164 (10%), Positives = 45/164 (27%), Gaps = 6/164 (3%)
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ ++ L + T + + + + + ++ L + + +
Sbjct: 192 QTPVAVIRLGTRAEQRTVTGCLQDIEEKVRKADLKHPVIIVVGETVKLREQLNWFETKRL 251
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILF 172
K ++ L E + + + L ILF
Sbjct: 252 MGKRILVTQSSNSGKLLACRLKELGAEVWHLPQVEYLKPESYREVDRELQRLNEYKYILF 311
Query: 173 YARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNV 212
+ + V +F + ++S + + A+ S NV
Sbjct: 312 TSPNGVEFFLNRLKCLELSIDALPEIIAIGEKTKKALENSGINV 355
>gi|150400513|ref|YP_001324279.1| uroporphyrinogen III synthase HEM4 [Methanococcus aeolicus
Nankai-3]
gi|150013216|gb|ABR55667.1| Uroporphyrinogen III synthase HEM4 [Methanococcus aeolicus
Nankai-3]
Length = 246
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/252 (11%), Positives = 70/252 (27%), Gaps = 29/252 (11%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ITRP + L+ + + P+++P R + Y I TS +
Sbjct: 1 MKVIITRPTETGLQFANLLDD-DFEPILIPTLE---LRFKKIDTDLKKYNWIVFTSPRGV 56
Query: 61 STLPANFCRH------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
L N + +K F + +++ E K
Sbjct: 57 MGLYKNKNNIKNFDLANKKIGVIGVETEKEVKKLFGRGADIIPKKYTAERLLEELKKHIN 116
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK---------NLLQ 165
Q ++ ++ + + Y S++ + +K L
Sbjct: 117 EQDKILIPTTPSARD-----ILHKNLNADLEFVYCSEEPSNIAQKLKDLKEIIKYEELKN 171
Query: 166 NADAILFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKN-VVTVACFPK 220
N + F + + FF + + + + + +
Sbjct: 172 NKIILTFTSGLTAKNFFKNADSELRELLKNHYIVSIGEITKKTVDSYGEEYNSIIPKKYT 231
Query: 221 ETSLLKLLPLRR 232
+++++ R
Sbjct: 232 INGMVEIIKKLR 243
>gi|330952275|gb|EGH52535.1| uroporphyrinogen-III synthase [Pseudomonas syringae Cit 7]
Length = 257
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 69/229 (30%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALARVLAEDGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P F++G A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPLQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNAD 168
+ P ++ + G + L + + + Y + + ++ +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLRGLGVGVDYLPLYRRYLPQHAPGALAQRVAVERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVT 214
+ + + L + S +AS A+ V
Sbjct: 185 GLGVSSGQGFEHLLQLAGDSWPVLADLPLFVPSPRVASIARAAGARTVI 233
>gi|238789374|ref|ZP_04633160.1| Uroporphyrinogen-III synthase [Yersinia frederiksenii ATCC 33641]
gi|238722517|gb|EEQ14171.1| Uroporphyrinogen-III synthase [Yersinia frederiksenii ATCC 33641]
Length = 219
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/216 (11%), Positives = 59/216 (27%), Gaps = 17/216 (7%)
Query: 31 LSYFIHDRE----SVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIG------EAS 80
+ F + L Q+ + S ++ R+ + +
Sbjct: 1 MIDFSPGDDLPKLPALLQEMQAGDLVFALSQNAIRYANPLLKRNNLSWPAQLSYYAIGRN 60
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
LA ++ + K + L G + L E
Sbjct: 61 TALALHTASRLHVTFPPTGETSEMLLSLPDLQKLSGKKALLLRGNGGRELLGESLAERGA 120
Query: 141 PLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFSLPLP-----AKISAA 193
+ +CY I Y E + D ++ + + ++L +
Sbjct: 121 TVTFCECYQRSPIFYDGSEQSAHWQRSGVDILVVTSGEMLQQIYTLVPDYYRSSWLLRCR 180
Query: 194 FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ +S+ +A+ + + +A +L++ L
Sbjct: 181 LVVVSDRLAALAAQMGWSDIQIAENADNDALIRALQ 216
>gi|332798469|ref|YP_004459968.1| uroporphyrin-III C-methyltransferase [Tepidanaerobacter sp. Re1]
gi|332696204|gb|AEE90661.1| uroporphyrin-III C-methyltransferase [Tepidanaerobacter sp. Re1]
Length = 509
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/223 (10%), Positives = 62/223 (27%), Gaps = 12/223 (5%)
Query: 18 KIQKMGYIPVMMPLSYFIH--DRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFA 75
K+++ G +M P + + + Y + TS ++ + +
Sbjct: 275 KLKQEGAEVIMCPTLKITFQMENMKQLINEIKDYDILIFTSKNGVNAFISFMKENKIDAR 334
Query: 76 I------GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNF 129
A + I+ + +K ++ K +
Sbjct: 335 HLAGKQIWAIGAKTGEELSKAHIYPDVVPEVYTSKALLGCIEKEHFGKSAAVITSDIGGV 394
Query: 130 HFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARSSVLYFFSLPLPA 188
L I + I Y ++ + + +Q+ D +F + SS + +
Sbjct: 395 ELIAGLENCGIKAKKITAYKNEPNFEIKEKLLEKVQDGIDVAVFTSPSSFDFMRKILNDD 454
Query: 189 K---ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + +A+ + + V + L + +
Sbjct: 455 MASFKNIKTAAIGPVTKAALEKAGQTVDIMPQEYTLEGLSRAI 497
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 42/142 (29%), Gaps = 12/142 (8%)
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE------DYLIEHKIPLRVIDCYYSQDIA 154
NL + + K +++LG + L + + +
Sbjct: 236 NLRDELSWYEKGELFGKKILFLGTGFSDEPMPRRDSPFYKLKQEGAEVIMCPTLKITFQM 295
Query: 155 YPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPAS 208
+ N +++ D ++F +++ V F S KI A + + +
Sbjct: 296 ENMKQLINEIKDYDILIFTSKNGVNAFISFMKENKIDARHLAGKQIWAIGAKTGEELSKA 355
Query: 209 YKNVVTVACFPKETSLLKLLPL 230
+ V +LL +
Sbjct: 356 HIYPDVVPEVYTSKALLGCIEK 377
>gi|290893956|ref|ZP_06556932.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL J2-071]
gi|290556494|gb|EFD90032.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL J2-071]
Length = 240
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 75/234 (32%), Gaps = 10/234 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+TR K Q + G+ V +PL + S+ + + +TS+ ++
Sbjct: 4 KVVLTREASKNQPWQTYFAQKGFAVVSVPLIKTRPKKISLSREQLE-AEWLFLTSANAVE 62
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
N H I IGE + + G+ F + E + +
Sbjct: 63 YFFMNQPGEAHYKIAVIGEKTREKLAEFGYKPSFIPSIYQS--EMFLEEWLNENPEKTSV 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSS 177
+ +D L E + ++ Y + + + LL + I+F + S+
Sbjct: 121 LLPQSNLSRSIIKDTLTEKGYLVHSVELYETVSPENSKIKLTELLNSNDIHIIIFASPSA 180
Query: 178 VLYFFSLPLP---AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F+S+ K + + AI A V L L+
Sbjct: 181 WKNFYSIAKSLPVQKEKWHIASIGSITTEAILADDWEVKYQPKTFTMKHLADLI 234
>gi|156552822|ref|XP_001599706.1| PREDICTED: similar to ENSANGP00000011555 [Nasonia vitripennis]
Length = 259
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/230 (16%), Positives = 75/230 (32%), Gaps = 19/230 (8%)
Query: 19 IQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSESLST-----------LP 64
+ + G+ ++ + +F L +SY + +TS + + L
Sbjct: 29 LTEHGFECEILQVLHFEFINLDDLRNTLLDSESYNGLILTSPRAAAAIAMTKMQNPFSLE 88
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGG 124
+ T + N+ NLA IV +KPL+
Sbjct: 89 PWLEKTTFCIGQATEFVAKEQVGLTNIFGSDSGNAKNLANFIVHTM-KEKCKKPLLLPCS 147
Query: 125 KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARSSVLYFFS 183
L+ +KI ++ I Y ++ + + L ++FY+ S V +
Sbjct: 148 DIARDTIPQILLNNKIEVKKIVVYKTKAHHFLAEALNEALNQSPHVLVFYSPSIVDNMLN 207
Query: 184 LPLPAK---ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
K + + + A+ + V VA P+ TSL +++
Sbjct: 208 ALSNNKTIFENFKIIAIGPVTEEALENAGIKVDGVAEKPEPTSLTEVIQK 257
>gi|318042500|ref|ZP_07974456.1| putative uroporphyrinogen III synthase [Synechococcus sp. CB0101]
Length = 270
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 66/251 (26%), Gaps = 26/251 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
I +TR ++ + ++ G + +P E LA + + ++SS
Sbjct: 12 IAVTRAEQQLGEARRLFEQAGATVLDLPALVIGPPDEWGPLDDALAELDEFHWLVVSSSN 71
Query: 59 SLSTLPANF----------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + A R I A+G +A G F + +I
Sbjct: 72 GVDAVEARLERLGGSLARRPRSLKIAAVGRKTAARLEALGAPADFVPPQFVADS--LIDH 129
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET--TMKNLLQN 166
V + L+ + E + + Y S+
Sbjct: 130 FPVSGWGLRLLLPRVQSGGRTVLAEAFGEAGARVVEVAAYESRCPDSLPEATAAALAAGA 189
Query: 167 ADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
DAI F + +V + L S A + + + V A
Sbjct: 190 VDAITFSSGKTVQHTAQLLEQQFGASWAQQLDSVALVSIGPQTSHTCRERMGRVDAEADP 249
Query: 219 PKETSLLKLLP 229
L+
Sbjct: 250 HDLDGLVAACA 260
>gi|15678194|ref|NP_275309.1| uroporphyrinogen III synthase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122179|sp|O26268|HEM4_METTH RecName: Full=Putative uroporphyrinogen-III synthase; Short=UROS;
AltName: Full=Hydroxymethylbilane hydrolyase
[cyclizing]; AltName: Full=Uroporphyrinogen-III
cosynthase
gi|2621208|gb|AAB84672.1| uroporphyrinogen III synthase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 253
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 67/246 (27%), Gaps = 24/246 (9%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYF-IHDRESVFL--AMQQSYGAIAITSSESLS 61
+TRP +++ E I+ G ++ P ES+ + + TS ++
Sbjct: 3 VTRPPERSAEAVELIEGAGGRALVAPTLELKEAHTESLREVCRRADEWDLVIFTSQAAVE 62
Query: 62 TLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+L + + IG +A +A + G +D + ++ L
Sbjct: 63 SLFQLCREFAGKIRKDCLVAVIGPRTARVAGEHGLRVDIVPEDYTA--EGLLDALTGLNI 120
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLL--QNADAI 170
+ L + V + Y S P + + L DA+
Sbjct: 121 EGWKVALPRTLSARKVLPRGLEMMGAEVLVAEAYRSGLPEDTGPAEELIDGLLDGKVDAV 180
Query: 171 LFYARSSVLYFFSLPLPA-------KISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F + +V F + + + V
Sbjct: 181 TFTSPLTVENLFKIAGNRRKELIEVLKRVKVAAIGPITLRKLEEHGITAV-TPERYTVKD 239
Query: 224 LLKLLP 229
++ L
Sbjct: 240 MIAALA 245
>gi|313619333|gb|EFR91066.1| porphyrin biosynthesis protein HemD [Listeria innocua FSL S4-378]
Length = 493
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 67/241 (27%), Gaps = 15/241 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R EKI+ +G M P + + A + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEKIRDLGGEVTMYPNIQVLDILPTKTKAELCETSELLFTSKEAVE 311
Query: 62 TLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
R + I ++I+E F
Sbjct: 312 RFFDYLATLELDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHIARFQK 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ +G ++ ++ Y + + L++ + + F +
Sbjct: 372 NASNLIIGSVVDTAE-VSAILSEVKATEIMPLYDMRPVTERP----FDLESFEQVCFSSS 426
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SV + + + L + ++ + + N A SL++L+
Sbjct: 427 RSVQNLLDVLTTEEKAILQTKTILSIGRFTSATLQSFGINEFEEAENATPESLIELIQKT 486
Query: 232 R 232
+
Sbjct: 487 K 487
>gi|317419525|emb|CBN81562.1| Uroporphyrinogen-III synthase [Dicentrarchus labrax]
Length = 261
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 71/258 (27%), Gaps = 28/258 (10%)
Query: 1 MYIVITR-PIKKALR---TQEKIQKMGYIPVMMPLSYFIHDRESVFLA---MQQSYGAIA 53
M +++ + P + R +++ G+ ++P+ F + + +G +
Sbjct: 1 MDVLLLKEPRDEESRPDPYIKELASYGHKATLIPVLSFKFVSLNTLSDKVFQPEKHGGLV 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV-- 111
TS ++ + + K + + + +
Sbjct: 61 FTSPRAVEAVKMCLEAEERRREWNSSVKDKWNTKSIYVVGKATAALVRSLGLNPLGEDTG 120
Query: 112 ------------LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
T PL + G R L ++ +PL + Y + + E
Sbjct: 121 TAQVLSSVIIDREDTNILPLFFPCGSIRREVLPKALRDNGVPLETLTVYQTAEHPELEKN 180
Query: 160 MKNLLQNADAIL---FYARSSVLYFFS----LPLPAKISAAFLCLSNNIASAIPASYKNV 212
+KN F++ S V + L F + A+ A V
Sbjct: 181 LKNYFTEQGTPASIAFFSPSGVKFCLEAVRRLSGEQLTQIKFAAIGPTTQDAMTAEGLCV 240
Query: 213 VTVACFPKETSLLKLLPL 230
A P L +
Sbjct: 241 SCAAEKPTAEHLAAAIAK 258
>gi|195456654|ref|XP_002075228.1| GK16872 [Drosophila willistoni]
gi|194171313|gb|EDW86214.1| GK16872 [Drosophila willistoni]
Length = 275
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 80/247 (32%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRT-QEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSE 58
++I + ++ E + + P+ +P F L Y I TS
Sbjct: 9 VIIFKSESESTEIYAETLNAHNFQPIFIPTLSFGFKNLDELQRKLQNPDKYAGIIFTSPR 68
Query: 59 SLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVE 108
+ + + +++GE + LA HGK N+ NL IV+
Sbjct: 69 CVEAVSEALQLSELPGGWKLLHNYSVGEVTHNLALSTLQQLFTHGKQTGNARNLGDYIVD 128
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---- 164
P++ G L E+ + + Y ++ ++ L
Sbjct: 129 TFDGSRNL-PMLLPCGNLATDTLLSKLAENGFSVDACEVYETKCNPQLGELLERALVQAS 187
Query: 165 QNADAILFYARSSVLY---FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
N + + F++ S V +F+ + + + A+ A V A P
Sbjct: 188 DNIEYLAFFSPSGVNCVYEYFNTRQIPLDKWKLVAIGPSTRRAMEAMGMKVFCTAERPTV 247
Query: 222 TSLLKLL 228
L+K+L
Sbjct: 248 EHLVKVL 254
>gi|195354935|ref|XP_002043951.1| GM13694 [Drosophila sechellia]
gi|194129196|gb|EDW51239.1| GM13694 [Drosophila sechellia]
Length = 277
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 82/247 (33%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSSE 58
++I + ++ E ++K + PV +P F + L Y I TS
Sbjct: 8 VIIFKSESESSDVYAETLEKHDFNPVFVPTLSFGFKNLEELRAKLQNPDKYAGIIFTSPR 67
Query: 59 SLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVE 108
+ + A+ + +A+GE + LA HGK N+ L IV+
Sbjct: 68 CVEAVAASLNLGELPGGWKMLHNYAVGEVTHNLALSTLDQLFTHGKQTGNARALGDYIVD 127
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
PL+ G L E+ + + Y ++ ++ L+
Sbjct: 128 TFDGSRAL-PLLLPCGNLATDTLLSKLAENGFSVDACEVYETRCHPELGANVERALEIYG 186
Query: 169 AIL----FYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F++ S ++ + + + A+ + + V A P
Sbjct: 187 ESIEFLAFFSPSGFNCALQYFTSRQLSMDKWKLVAIGPSTRRALESLGQKVYCTAERPTV 246
Query: 222 TSLLKLL 228
L+K+L
Sbjct: 247 EHLVKVL 253
>gi|109896671|ref|YP_659926.1| uroporphyrinogen III synthase HEM4 [Pseudoalteromonas atlantica
T6c]
gi|109698952|gb|ABG38872.1| Uroporphyrinogen III synthase HEM4 [Pseudoalteromonas atlantica
T6c]
Length = 240
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 67/232 (28%), Gaps = 6/232 (2%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-----SVFLAMQQSYGAIAIT 55
M ++I RP +K + + G V + L +E L S I +T
Sbjct: 1 MTVLIFRPEQKCAPSAARFITAGLPAVGVGLISTQASQEALSSLPSALGSLSSGDGIIVT 60
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
S+ L I + A+ ++ +
Sbjct: 61 STVVSQLLAQQRIELPNSATIFAVGSSTAQGLRAQGYDVTVPLVPTTEGLLALSPLKEIA 120
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ L G+ L + + + D Y IA P+ T + + I+ +
Sbjct: 121 GHTVVILKGQGGREDLAQQLTQRGATVLLADIYQRIKIATPKATQEWQAEQIRCIIATSG 180
Query: 176 SSVLYFFSLPL-PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F S ++ +S + V+ + +L++
Sbjct: 181 EIIDTAFEHFDAKWLQSLPWIVVSPRTEQIAVKQGIKTIFVSDDASDQALIR 232
>gi|312380166|gb|EFR26244.1| hypothetical protein AND_07830 [Anopheles darlingi]
Length = 260
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/256 (18%), Positives = 85/256 (33%), Gaps = 28/256 (10%)
Query: 1 MY--IVITRPIKKA-LRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAI 54
M +VI + + ++K GY PV +P F R V L Y +
Sbjct: 1 MRNVVVILKSESENTDNYGALLEKHGYEPVFIPTLEFSFQRLDVLRDRLLSPYKYSGLIF 60
Query: 55 TSSESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
TS S++ L ++ + + R H N+ NLA
Sbjct: 61 TSPRSITAVRDALQGQKLKDDWKTLENYCVGETSRDLIQRTLDLDTKGHHSGNASNLADF 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
I T P ++ G + ++ L E+ L ++ Y + E + +L +
Sbjct: 121 IKTDLYNKTVTLPFLFPCGNLKQDVLQNKLSEYGYSLDSVEVYETVPHRELERNLVSLFR 180
Query: 166 ----------NADAILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNV 212
D++LF++ S + Y + +IS + + + AI V
Sbjct: 181 SETEEPRGERRIDSLLFFSPSGINYCAHVFEKHRISLAGKKIIAIGPSTKKAIENKGIQV 240
Query: 213 VTVACFPKETSLLKLL 228
A P ++ L
Sbjct: 241 HRTAEKPSADYVIGAL 256
>gi|224053172|ref|XP_002193805.1| PREDICTED: similar to uroporphyrinogen III synthase [Taeniopygia
guttata]
Length = 268
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 77/258 (29%), Gaps = 33/258 (12%)
Query: 1 MYIVITR-PIKKAL---RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS---YGAIA 53
M +++ + P K +++ ++P+ F YG +
Sbjct: 1 MKVLLLKDPKDKDSGPDPYIKELGSYSLEATLIPVLSFDFTSLESLFGKLSHPECYGGLV 60
Query: 54 ITSSESLSTLPAN----------------FCRHTPIFAIGEASACLARQKGFTQIFHGKD 97
TS +L + P + +G+A+A L + G
Sbjct: 61 FTSPRALEAIKICLKEKSKKEAWSNSLKQMWNIKPTYVVGKATASLVEEIGLVPQGEKAG 120
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
N+ LA+ I L++ G + L E IPL + Y + +
Sbjct: 121 NAEKLAEYI---CSKKPNSSALLFPCGALKREVLPTVLREKGIPLESLTVYQTAQHPDLQ 177
Query: 158 TTMKNLLQNADAI---LFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYK 210
++ + +F++ S V + F + + A A+ +
Sbjct: 178 ESLSSYFSQQGIPASVVFFSPSGVKFCLQHIQKLSGDLINQIKFAAIGPSTAEALRGAGV 237
Query: 211 NVVTVACFPKETSLLKLL 228
+V A P L +
Sbjct: 238 SVSCTAGSPTAQDLAAAI 255
>gi|55379659|ref|YP_137509.1| uroporphyrinogen-III synthase [Haloarcula marismortui ATCC 43049]
gi|55232384|gb|AAV47803.1| uroporphyrin-III C-methyltransferase [Haloarcula marismortui ATCC
43049]
Length = 260
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 61/242 (25%), Gaps = 22/242 (9%)
Query: 2 YIVITRPIKK-ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAI 54
+ RP E I+ +G PV P+ A + + +
Sbjct: 8 RVAAFRPDDDRLDDAVELIESLGADPVPDPMLAIEPATADDAEATGRQVTPRSDADYVVL 67
Query: 55 TSSESLSTLPANFCR--HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
TS + + AIG+++A + G+ + S +VE
Sbjct: 68 TSKTGVELAAEAGWDAGEATVCAIGDSTAEALHEAGYGVDIIPAEYSSTG---LVETLSG 124
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-DAIL 171
+ + D L + Y + + DA L
Sbjct: 125 AVAGARVEVARSDHGSAVLTDGLEAAGAYVHETVLYRLVRPEGSGESAELAASGDLDAAL 184
Query: 172 FYARSSVLYFFSLPLPAKIS---------AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
F + +V +F + A + + +V V
Sbjct: 185 FTSSLTVEHFLDAAADLGLREAVIDGLNEATVAAIGQPTRETAEDAGISVDVVPDQADFE 244
Query: 223 SL 224
+L
Sbjct: 245 AL 246
Score = 41.7 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 11/124 (8%), Positives = 31/124 (25%), Gaps = 5/124 (4%)
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET----TMKNLLQ 165
+ + R + + + +
Sbjct: 1 MREEPRLRVAAFRPDDDRLDDAVELIESLGADPVPDPMLAIEPATADDAEATGRQVTPRS 60
Query: 166 NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+AD ++ +++ V A + ++ A A+ + V + T L+
Sbjct: 61 DADYVVLTSKTGVELAAE-AGWDAGEATVCAIGDSTAEALHEAGYGVDIIPAEYSSTGLV 119
Query: 226 KLLP 229
+ L
Sbjct: 120 ETLS 123
>gi|33864231|ref|NP_895791.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9313]
gi|33635815|emb|CAE22140.1| putative uroporphyrinogen III synthase [Prochlorococcus marinus
str. MIT 9313]
Length = 277
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/247 (10%), Positives = 65/247 (26%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
I++TR ++ + ++ +G + +P + LA +++ + +S+
Sbjct: 14 IIMTRAQEQQSEARSQLHALGSNVLDLPALVIGPPDDWQPLDDALADIKTFHWLVFSSAN 73
Query: 59 SLSTLPANFCRHTPIFAIGEAS--------ACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + R A + + +I
Sbjct: 74 GVRAVEERLQRIGQSLANRPKGLKLAAVGRKTAQYLEHLGAAVDFVPPNFVADSLINHFP 133
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
V K L+ + E + + Y S+ L N++
Sbjct: 134 VSGFGLKMLLPRVQSGGRTILGEAFRESGAHVIEVAAYESRCPEAIPDDTATALANSNVD 193
Query: 170 -ILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
I F + + + SL + + + + + + V A
Sbjct: 194 AIAFSSGKTAAHTASLLSHRFGSDWLQQLETVKVISIGPQTSLSCEQHFGRVDQEADPHN 253
Query: 221 ETSLLKL 227
L+
Sbjct: 254 LEGLISA 260
>gi|126656435|ref|ZP_01727696.1| uroporphyrinogen-III synthase [Cyanothece sp. CCY0110]
gi|126622121|gb|EAZ92828.1| uroporphyrinogen-III synthase [Cyanothece sp. CCY0110]
Length = 281
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 76/252 (30%), Gaps = 24/252 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I+IT P R +I G +P++MP + L + IA TS
Sbjct: 17 RILITAPRNYVSRLATEIINYGGVPIIMPTIETCYLSSYKKLDNCLNNISQFNYIAFTSR 76
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV- 107
++ L + + AIG+ + L I + + + + +
Sbjct: 77 NGINALINRLETLNIPRSYLDNCQLIAIGKDAQRLKEMGLKVAIMPKEPSPLGIVSELAK 136
Query: 108 ----EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA---YPETTM 160
E++ + P +I + +F L + + + Y ++ + Y
Sbjct: 137 IDNIEKQSILIPIPQVIGISEPDIIPNFITALERLGMKINPVYAYQTRCLETSLYDMEID 196
Query: 161 KNLLQNADAILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACF 218
D I F + + + F L ++ C A V V
Sbjct: 197 LIKQGKIDVIAFSSTAEIESFLQLVNNTQLFKQCLIACFGPYTAGNARKLGLTVDIVGKD 256
Query: 219 P-KETSLLKLLP 229
T ++ +
Sbjct: 257 YHSFTGFVEAIA 268
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 41/139 (29%), Gaps = 13/139 (9%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHK----IPLRVIDCYYSQDIAYPE 157
+ ++ K L K ++ + +I + I + CY S
Sbjct: 1 MKNNLLASKTLPLYNKRILITAPRNYVSRLATEIINYGGVPIIMPTIETCYLSSYKKLDN 60
Query: 158 TTMKNLLQNADAILFYARSSVLYF------FSLPLPAKISAAFLCLSNNIASAIPASYKN 211
N + + I F +R+ + ++P + + + + A +
Sbjct: 61 --CLNNISQFNYIAFTSRNGINALINRLETLNIPRSYLDNCQLIAIGKD-AQRLKEMGLK 117
Query: 212 VVTVACFPKETSLLKLLPL 230
V + P ++ L
Sbjct: 118 VAIMPKEPSPLGIVSELAK 136
>gi|304314378|ref|YP_003849525.1| uroporphyrinogen-III synthase [Methanothermobacter marburgensis
str. Marburg]
gi|302587837|gb|ADL58212.1| uroporphyrinogen-III synthase [Methanothermobacter marburgensis
str. Marburg]
Length = 265
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 67/250 (26%), Gaps = 24/250 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
I +TRP ++ + I+ G ++ P + + + TS +
Sbjct: 14 IALTRPAERVSAAVKLIEGAGGRALVAPTLELRILKTDSLREVCRRAPEWDLVIFTSPAA 73
Query: 60 LST-------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ + + IG +A A + G +D + ++ +
Sbjct: 74 VESLFSTCKDFHEKIRDECIVAVIGPKTARAASEMGLRVDLVPEDYTA--EGLLEALRKY 131
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLLQN--AD 168
+ L E + V + Y+S P M + D
Sbjct: 132 DLEGMQVALPRTLSARRVLPMGLEEMGAEVLVAEAYHSGIPEDTAPAEEMIEGILKGEVD 191
Query: 169 AILFYARSSVLYFFSLPLP-------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
A+ F + +V F + A + + + V +
Sbjct: 192 AVTFTSPLTVENLFKIAGDKEGDLIHALRGIHVAAIGPITLRKLEEYGLDAV-IPERYTV 250
Query: 222 TSLLKLLPLR 231
+L L R
Sbjct: 251 RDMLAELSER 260
>gi|84501230|ref|ZP_00999435.1| hypothetical protein OB2597_12733 [Oceanicola batsensis HTCC2597]
gi|84390521|gb|EAQ03009.1| hypothetical protein OB2597_12733 [Oceanicola batsensis HTCC2597]
Length = 233
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 72/231 (31%), Gaps = 13/231 (5%)
Query: 1 MY--IVITRPIKKALRTQEKIQKM-GYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M I++TRP T + ++ G PL + L G + TS
Sbjct: 1 MRPTILMTRPDPDGAETARDLARLTGLTVARSPLLAIRP---AARLPDTGGAGRLIFTSR 57
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
++ P +GEA+A AR+ G G D + I+ P
Sbjct: 58 NAVRAYRDLGGEPKPAICVGEATAAEARRIGCRAHAMGGDAEAMVGAILA-----DPPAD 112
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY-PETTMKNLLQNADAILFYARS 176
P+I+L G L + + Y + + Y+
Sbjct: 113 PMIHLRGAHARGDVASRLAAAGLSVTEAVIYSQDLLDLTSRARALLDGSAPVIVPLYSPR 172
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ F +L P + + LS + A V +VA P +L +
Sbjct: 173 TAARFAALANP-RAPLYLVSLSAAVNEAAQRLDTAVRSVADRPDAEALTRA 222
>gi|259417055|ref|ZP_05740974.1| uroporphyrinogen-III synthase [Silicibacter sp. TrichCH4B]
gi|259345961|gb|EEW57775.1| uroporphyrinogen-III synthase [Silicibacter sp. TrichCH4B]
Length = 245
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 76/229 (33%), Gaps = 13/229 (5%)
Query: 3 IVITRPIKKALRTQEKI---QKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++TRP + A R E + + + PL + A+ TS E
Sbjct: 8 LLMTRPREAAQRFVELLPSNLRANLPIIYSPLLEISALP---IMIDLGGVDAVIFTSGEG 64
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + +GE + S + A +V P L
Sbjct: 65 VRVASDGQPLRIRAYCVGERTTKA-----ARLAGWDAQYSGDTADALVAALRADAPGGNL 119
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY-PETTMKNLLQNADAILFYARSSV 178
++L G+ L + I + Y + ++ E Q + ++ +
Sbjct: 120 LHLHGEFTRGAVAKRLSDTGISCSGMAIYRQELSSFTAEADTTLATQRPLIVPLFSPRTA 179
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+F SL P + + +S +A A+P V+ FP ++++L
Sbjct: 180 AHFASLC-PENAHLSLIAMSEQVAEAMPRLQSGARHVSKFPTAEAMVEL 227
>gi|163745149|ref|ZP_02152509.1| uroporphyrinogen-III synthase, putative [Oceanibulbus indolifex
HEL-45]
gi|161381967|gb|EDQ06376.1| uroporphyrinogen-III synthase, putative [Oceanibulbus indolifex
HEL-45]
Length = 253
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 82/237 (34%), Gaps = 20/237 (8%)
Query: 2 YIVITRPIKKALRTQEKIQ---KMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
+++TRP A + E++ + G V+ PL + L ++ + TS+
Sbjct: 26 RLLLTRPQPGAAQFLERLSPALRTGA--VISPLIEIVPTG---ALVDLAAFAGVIFTSAN 80
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
++ P P + +G + A + G+ G D +A + T P
Sbjct: 81 GVAHAPQGG--GMPAYCVGPQTTEAAGKAGWQAQMAGLDAKAMIATL-----SGRTEIGP 133
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSS 177
L++L G+ R L + V Y + L + ++ ++ S
Sbjct: 134 LLHLAGRHRRGDVAGILNASGLTTEVATVYEQHLLPLTAEAQTLLKGSDPVLVPLFSPRS 193
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL---LKLLPLR 231
+F S + +S+ A A+ VA P ++ ++ L R
Sbjct: 194 AQHFAREAG-HTQSVIAVSISHAAARALEGLPLYAHDVAAEPTGEAMAKTVEKLFRR 249
>gi|186682060|ref|YP_001865256.1| uroporphyrinogen III synthase HEM4 [Nostoc punctiforme PCC 73102]
gi|186464512|gb|ACC80313.1| Uroporphyrinogen III synthase HEM4 [Nostoc punctiforme PCC 73102]
Length = 300
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 77/252 (30%), Gaps = 24/252 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
I++T P A R E+I K G +PV MP + + L + I TS
Sbjct: 39 RILVTAPRNYAYRLSEQIIKQGGLPVFMPTIETCYLSNYAKLDAALNHIAEFDWIVFTSR 98
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ + A+G+ + L G + + + + + +
Sbjct: 99 NGITAFFHRMNDLNIPVSVVEKCQLCALGKDAESLLSFCGKVDLIPTESSPAGIVAELAK 158
Query: 109 -----QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
K + P ++ L + L + + + Y +Q + +++
Sbjct: 159 IPQIHNKKVLIPAPEVVGLPEPDVVPNLITDLQQLGTEVIRVPTYITQGLNTSIYSIELN 218
Query: 164 LQNA---DAILFYARSSVLYFFSLP--LPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L + D I F + + V F ++ C + NV V+
Sbjct: 219 LIHQGMIDVIAFSSTAEVESFLTMVNSQSDYEGCIVACFGPYTTANARKLGVNVSIVSRD 278
Query: 219 PKE-TSLLKLLP 229
+ +
Sbjct: 279 YSSFEGFAEAIA 290
>gi|187929643|ref|YP_001900130.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Ralstonia pickettii 12J]
gi|187726533|gb|ACD27698.1| protein of unknown function DUF513 hemX [Ralstonia pickettii 12J]
Length = 702
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 62/256 (24%), Gaps = 29/256 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
+V+TRP +A +++ G PL L Y + S
Sbjct: 29 VVVTRPRAQAPMLVAALERHGLRTHQFPLLDIAPTPNLDDLRAALGDPSRYALVVFVSPN 88
Query: 59 SLSTLPANFCRHTPI--------------FAIGEASACLARQKGFTQIFHGKDNSINLAK 104
++ + A+ + H D +
Sbjct: 89 AVQQAFSAMPEGFRWPQEVPVAVVGPASAQALATHGVAPPAHRVIKPDTHADDARQDSEA 148
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPETT--MK 161
+ V + ++ + G D L E +R + Y + ++
Sbjct: 149 LYARLDVPSLSGREVLIVRGNGGREWLADQLREAGASVRTAEAYRRSVPVPDAAAWLALR 208
Query: 162 NLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVV 213
+L + A + +V L A I + V
Sbjct: 209 AVLSSRHAWTLTSSEAVRNLDELARANLSPADLDTLHGAPCFASHARIVEQAESLGFRDV 268
Query: 214 TVACFPKETSLLKLLP 229
T+ + L +L
Sbjct: 269 TLTGAGDDRLLASVLA 284
>gi|309781591|ref|ZP_07676325.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Ralstonia sp. 5_7_47FAA]
gi|308919566|gb|EFP65229.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Ralstonia sp. 5_7_47FAA]
Length = 675
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 62/256 (24%), Gaps = 29/256 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
+V+TRP +A +++ G PL L Y + S
Sbjct: 2 VVVTRPRAQAPMLVAALERHGLRTHQFPLLDIAPTPNLDDLRAALGDPSRYALVVFVSPN 61
Query: 59 SLSTLPANFCRHTPI--------------FAIGEASACLARQKGFTQIFHGKDNSINLAK 104
++ + A+ + H D +
Sbjct: 62 AVQQAFSAMPEGFRWPQEVPVAVVGPASAQALATHGVAPPAHRVIKPDTHADDARQDSEA 121
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPETT--MK 161
+ V + ++ + G D L E +R + Y + ++
Sbjct: 122 LYARLDVPSLSGREVLIVRGNGGREWLADQLREAGASVRTAEAYRRSVPVPDAAAWLALR 181
Query: 162 NLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVV 213
+L + A + +V L A I + V
Sbjct: 182 AVLSSRHAWTLTSSEAVRNLDELARANLSPADLDTLHGAPCFASHARIVEQAESLGFRDV 241
Query: 214 TVACFPKETSLLKLLP 229
T+ + L +L
Sbjct: 242 TLTGAGDDRLLASVLA 257
>gi|213583679|ref|ZP_03365505.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 192
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 57/191 (29%), Gaps = 12/191 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S++ A R + + LA + ++ +
Sbjct: 61 QHSVAFAHAQLQRDGRNWPASPRYFSIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNAD 168
+ K + L G + L + +CY Y E M+ +
Sbjct: 121 LQNIAGKRALILRGNGGRELLGETLTVRGAEVSFCECYQRCAKHYDGAEEAMRWHTRGVT 180
Query: 169 AILFYARSSVL 179
++ + +
Sbjct: 181 TLVVTSGEMLQ 191
>gi|255262277|ref|ZP_05341619.1| uroporphyrinogen III synthase HEM4 [Thalassiobium sp. R2A62]
gi|255104612|gb|EET47286.1| uroporphyrinogen III synthase HEM4 [Thalassiobium sp. R2A62]
Length = 261
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 72/234 (30%), Gaps = 16/234 (6%)
Query: 1 MY--IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
M +++TRP +++L T ++ + + V+ L + + S+ +TS
Sbjct: 24 MRATLLLTRPFEQSLETAKRCEGLSANIVVSSLIEIVPTADMPETPADSSF---VVTSQN 80
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
LP + + + K + +L +I P
Sbjct: 81 GARRLPET--QEGIVVFCVGDRTAQIASELGYVTKSAKGDVDDLLSLI----NRRDEIGP 134
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSS 177
L+++ G + L Y ++ L IL ++ +
Sbjct: 135 LVHVRGVHTSGDLVAKLSAQGHQASEWIAYDQREQPLSADAKLALNGEKPIILPLFSPRT 194
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL---KLL 228
+ P + +S + A+ + + VA P ++L + L
Sbjct: 195 ASLLLAQ-GPFSAPIHPIGMSQAVLDALGSMQTHPPRVAARPTADAMLTEIEAL 247
>gi|94498043|ref|ZP_01304606.1| uroporphyrinogen-III synthase [Sphingomonas sp. SKA58]
gi|94422478|gb|EAT07516.1| uroporphyrinogen-III synthase [Sphingomonas sp. SKA58]
Length = 227
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 76/231 (32%), Gaps = 13/231 (5%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I+I RP A RT +K +++G +P + PL F + + A+ +TS+
Sbjct: 1 MRPILILRPQPGADRTADKARQLGLLPSIHPL--FAPHARDWAAPPARDFDALLLTSANG 58
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A ++ + A ++ A + ++ + +
Sbjct: 59 VRCAGAGLEQYRGLPTYAVGQATAGALHTAGWDDVAAGDADGSA---IAARIARDGHRRV 115
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+++ G L + I Y+ + + Q A ++ R+
Sbjct: 116 LHIAGTTVAPIEAGPLA-----ITRIAVYHMAALPSDPALIAAATQGAILLVHSPRAGKQ 170
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+P + + + +S N+ +A P + +L L
Sbjct: 171 LAAQMPQARRGALHLIAISANVLAACGD-GWASAACPPRPDDDEML-ALAR 219
>gi|307182935|gb|EFN69945.1| Uroporphyrinogen-III synthase [Camponotus floridanus]
Length = 268
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 85/231 (36%), Gaps = 20/231 (8%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHD---RESVFLAMQQSYGAIAITSSESLSTL--------- 63
+ ++ GY + F L+ + Y + +TS ++ +
Sbjct: 25 IKTLESAGYTCEYLQTLQFEFVNISELRACLSTAEKYSGLILTSPRTVEAISLVVKKDVN 84
Query: 64 PANFCRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTPQKPLIY 121
+ P++ IG A+ LAR + Q G + NS LA+ I+ + KPL+Y
Sbjct: 85 ILYSWQQIPVYCIGLATDSLARNQLNLQHCIGSESGNSKQLAERIILDIKKDS--KPLLY 142
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARSSVLY 180
L ++ + ++ I Y + E + +L+ +F++ S V +
Sbjct: 143 PCSDIARETIACILNDNGVTIQKIVVYKTLASELLEQDLSKILKKSPSIFVFFSPSIVEH 202
Query: 181 FFSLPLPAK---ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + + A+ S NV T A P+ +LL+ +
Sbjct: 203 ITTQFKRNSYDIKNIKAVAIGPVTKHALINSGFNVYTTADKPEPEALLRAI 253
>gi|256419532|ref|YP_003120185.1| uroporphyrinogen III synthase HEM4 [Chitinophaga pinensis DSM 2588]
gi|256034440|gb|ACU57984.1| Uroporphyrinogen III synthase HEM4 [Chitinophaga pinensis DSM 2588]
Length = 263
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 72/244 (29%), Gaps = 24/244 (9%)
Query: 3 IVITRPIKKAL-----RTQEKIQ-KMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
I+I++P + +K K+ + P F ++ A+
Sbjct: 18 ILISQPKPETEKSPYFELAKKFNVKLDF----YPFIRVEGLSAKEFRKQKIDIPNFTAVI 73
Query: 54 ITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
TS ++ F I EA A ++ + + K +
Sbjct: 74 FTSRNAVDHFFRICEEMKIKVSQDCKYFCITEAIALYLQKFILYRKRKVFYGADGSTKSL 133
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+E + ++ + E++L +K Y + E +
Sbjct: 134 LEVMNKHRDNEKFLFPSSDSQRKDIEEWLKTNKCEYATATLYKTVSNDVKE---VLTATD 190
Query: 167 ADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D I+F++ V F + + ++A+ + + A P+ S++
Sbjct: 191 YDMIVFFSPYGVKSLFENVPKFEQNGTRIGAFGPTTSAAVEEAGLRLDVKAPAPQAPSMV 250
Query: 226 KLLP 229
L
Sbjct: 251 AALE 254
>gi|17227783|ref|NP_484331.1| uroporphyrinogen-III synthase [Nostoc sp. PCC 7120]
gi|17135265|dbj|BAB77811.1| uroporphyrinogen-III synthase [Nostoc sp. PCC 7120]
Length = 276
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 80/253 (31%), Gaps = 24/253 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
I++T P A R +I G +P++MP + + ++ + IA TS
Sbjct: 17 RILVTAPRNYASRLSAQIICKGGLPILMPTIETCYLSNFSKLDAVISSINEFDWIAFTSR 76
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ ++ + A+G+ L G + + + + +
Sbjct: 77 NGIIAFFERLHNLDISITKLQNCQLCALGKDIDILLSLFGKVDLIPDESSPAGIVAEFSQ 136
Query: 109 QK-----VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ P +I + +F L E + + + Y +Q + +++
Sbjct: 137 ICGIREQKILVPVPEVIGIPEPNIVPNFIKDLEELGMQVIRVPAYITQSLDKDIYSVEIN 196
Query: 164 LQNA---DAILFYARSSVLYFFSLP--LPAKISAAFLCLSNNIASAIPASYKNVVTVA-C 217
L D I F + + + F ++ C A+ NV V+
Sbjct: 197 LIQQGLIDIIAFSSTAEIESFLAMFNSKSEFQHCVVACFGPYTAANAEQLGLNVSIVSTD 256
Query: 218 FPKETSLLKLLPL 230
F ++ +
Sbjct: 257 FSSFEGFVEAIVK 269
>gi|298491079|ref|YP_003721256.1| uroporphyrinogen III synthase HEM4 ['Nostoc azollae' 0708]
gi|298232997|gb|ADI64133.1| Uroporphyrinogen III synthase HEM4 ['Nostoc azollae' 0708]
Length = 281
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 81/257 (31%), Gaps = 28/257 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++T P A R E+I K G +P++M + + L + I TS
Sbjct: 23 KVLVTAPRNYACRLLEEIIKKGGLPILMSTIETCFLSDYTDLDITLQKLDKFNWIIFTSR 82
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + A+G+ + L G + + + + + +
Sbjct: 83 NGIIAFFQRLHELNIPHSALHNCQLCALGKDTESLLSLCGRVDLIPEEPSPAGIVAELSK 142
Query: 109 -----QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ + P ++ L + + L + + + + Y +Q I ++
Sbjct: 143 IPNIHYQTVLVPTPEVVGLPEPNIIPNLINDLHKLGMQVTRLSTYMTQCIDKNIYAVELN 202
Query: 164 LQNA---DAILFYARSSVLYFFSLP--LPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L D I F + + V F + ++ C A+ + NV V+
Sbjct: 203 LIRQGMIDIIAFSSTAEVESFIRMFDSRSDYENSIIACFGPYTATNVQDLGLNVSIVSND 262
Query: 219 PK-----ETSLLKLLPL 230
++ L
Sbjct: 263 YSSFAGFTAAMADFLLR 279
>gi|28493698|ref|NP_787859.1| uroporphyrinogen-III synthase-like protein [Tropheryma whipplei
str. Twist]
gi|28572886|ref|NP_789666.1| porphyrin biosynthesis protein [Tropheryma whipplei TW08/27]
gi|28411019|emb|CAD67404.1| porphyrin biosynthesis protein [Tropheryma whipplei TW08/27]
gi|28476740|gb|AAO44828.1| uroporphyrinogen-III synthase-like protein [Tropheryma whipplei
str. Twist]
Length = 241
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 73/236 (30%), Gaps = 14/236 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD-RESVFLAMQQSYGAIAITSSESL 60
++ ITR + A ++ G V+ P+ + L + + +TSS +
Sbjct: 7 HVWITRGGQWAREIAGMLKVRGVTSVVHPVIDCVPVMGYENELQKIPFFDWLIVTSSTTA 66
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAKIIVEQKVLFTPQ-- 116
L + + A+G +A + G +++ + LA I
Sbjct: 67 GLLNTPIPQSVKVAAVGRETAESLIRAGHRVSLCPENDFSSDGLASAIQAHLNFPRRTCD 126
Query: 117 ----KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ ++ L + L + V+ Y + + P L N A
Sbjct: 127 SVISQRILILTSDLSEGFLKSALERMGHKVTVLVIYKTVILDIPP---MPQLDNITAAFV 183
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S +C+ + A S V ++A + L++ L
Sbjct: 184 TSGSIAQGIAK--TGLFFDLPLVCIGHKTAEICQRSGLRVASIARTKNKEGLVQAL 237
>gi|167569224|ref|ZP_02362098.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia oklahomensis C6786]
Length = 659
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 67/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 11 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLADAFARLDAYALVVFVSPNA 70
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 71 IDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPREPGDGGEPHYDSENL 130
Query: 106 IVEQK-----VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E + K ++ + G + L + + ++ Y
Sbjct: 131 FAEIERAFGGAADLAGKRVLIVRGDGGREWLAERLRDAGAEVELVAAYRRVTPEPSIGAW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPA--------KISAAFLCLSNNIASAIPAS 208
+ + A L + V L A F+ I A
Sbjct: 191 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNEAEIDALKHAQFVAPHPRIVETARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T++ + +++
Sbjct: 251 GFDRITLS-GAGDERIVRA 268
>gi|332705686|ref|ZP_08425762.1| uroporphyrinogen-III synthase [Lyngbya majuscula 3L]
gi|332355478|gb|EGJ34942.1| uroporphyrinogen-III synthase [Lyngbya majuscula 3L]
Length = 272
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 73/252 (28%), Gaps = 24/252 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYF----IHDRESVFLAMQQSYGAIAITSS 57
I++T P R ++I G +P++MP + L + IA TS
Sbjct: 16 RIIVTAPRTYGSRLSQQIINQGGLPIVMPTIETCLLENYPELDAALREISKFDWIAFTSR 75
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ A ++ + AIG+ + L+ + + + + +
Sbjct: 76 NGIDAFFARMASLGISKSVLKNCQLSAIGKDAERLSDFGVTADLVPAEASPTGMVTELSN 135
Query: 109 QKVLFT-----PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA---YPETTM 160
+ P ++ + +F L E I + + Y ++ + Y
Sbjct: 136 YPTIDQKTILVPIPKVVGIPEPNVIPNFISGLQELGIKVSPVLTYQTRILDKTIYDVELN 195
Query: 161 KNLLQNADAILFYARSSVLYFFSLP--LPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
D I F + + V F ++ C A+ V V+
Sbjct: 196 LIRQGKIDVIAFSSTAEVTAFLTMVNSPQDYNHCVIACFGPYTAANTENLGLTVSIVSKN 255
Query: 219 P-KETSLLKLLP 229
+
Sbjct: 256 YRSFEGFANAIA 267
>gi|312127738|ref|YP_003992612.1| uroporphyrin-III C-methyltransferase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777757|gb|ADQ07243.1| uroporphyrin-III C-methyltransferase [Caldicellulosiruptor
hydrothermalis 108]
Length = 491
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 21/233 (9%), Positives = 63/233 (27%), Gaps = 14/233 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPV--MMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+ ITRP + + + +G V + L Y + TS
Sbjct: 253 RVCITRPKNVSRNIKSLLFSLGADVVDGCCSKLVLHREEIDKILNSLPEYNILVFTSVNG 312
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ------KGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + + + + + + +I +
Sbjct: 313 VDSFFDYLIEKNIDVRNIKGDFAAIGKKTALSLQKRGFRVKYIPDEHSSDGLIKIFENEV 372
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
K ++ + K + ++ L + I Y + P + ++D +F
Sbjct: 373 DKSKKILTVQSKNAGDYLKNSLESLGFEVDTIFAYSMEFTKNPNDAV----YDSDIFVFT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ +F +S + + + + + + ++ + ++
Sbjct: 429 SSGMFRHFIECYGVEVLSNKIVISIGEHTQKTLESFGIKSI-ISNEATDEGIV 480
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 33/115 (28%), Gaps = 5/115 (4%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K + K + + + L + C + N L + ++F + +
Sbjct: 252 KRVCITRPKNVSRNIKSLLFSLGADVVDGCCSKLVLHREEIDKILNSLPEYNILVFTSVN 311
Query: 177 SVLYFFSLPLPAKISAA-----FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
V FF + I F + A ++ V + L+K
Sbjct: 312 GVDSFFDYLIEKNIDVRNIKGDFAAIGKKTALSLQKRGFRVKYIPDEHSSDGLIK 366
>gi|242373961|ref|ZP_04819535.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis
M23864:W1]
gi|242348315|gb|EES39917.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis
M23864:W1]
Length = 227
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 67/236 (28%), Gaps = 19/236 (8%)
Query: 1 MY--IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
M IV+T+ K + PL + L SY + +S
Sbjct: 2 MKPVIVMTQTSKVQSDLV--------NIIHKPLIQIQELSFNEHLLN-HSYDWLIFSSKN 52
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
++ A + + + + E + +
Sbjct: 53 AVKYFYAYLKSVKVKKVAVIGAKTAQYCQDLNIHVDFLPQDFSQEGFLAEFQNKD---QK 109
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARS 176
++ + + L ++ + ID Y +K L++ I F + S
Sbjct: 110 ILLPSSQYARPKLANQLNKYN-DVTKIDLYRPVAHQQHIEEVKQLVKEKHIDAITFSSSS 168
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+V ++FS + + + + A + V +A SL+ + R
Sbjct: 169 AVRFYFSDNNIPEFN-HYYAIGKQTADTLKEY-HQNVRIADQQTSESLIDKILESR 222
>gi|146280920|ref|YP_001171073.1| uroporphyrinogen-III synthase [Pseudomonas stutzeri A1501]
gi|145569125|gb|ABP78231.1| uroporphyrinogen-III synthetase [Pseudomonas stutzeri A1501]
Length = 256
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 17/230 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
+++TRP ++ + + G +PL ES + Y A+ + S
Sbjct: 5 RLLLTRPAEECEALAATLAEAGVHSSSLPLLAIEPLPESAEQRATILELDRYCAVVVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKG--------FTQIFHGKDNSINLAKIIVEQ 109
+ R+ P G+A + G D+S L +
Sbjct: 65 PAARLGLELLDRYWPQPPFGQAWFSVGGATGAILEAYGLDVSWPERGDDSEALLALPRLA 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-- 167
+ L P ++ + G+ + L + + ++ Y YP T+ ++++
Sbjct: 125 QALARPDPKVLIMRGEGGREFLAETLRGRGVQVDFLELYRRSLPDYPPGTLVQVVRSERL 184
Query: 168 DAILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
+ ++ + +L L P S +A +
Sbjct: 185 NGLVVSSGQGLLSLHELAADTWPELCELPLFVPSPRVAEMARQLGAKRIV 234
>gi|319789485|ref|YP_004151118.1| Uroporphyrinogen III synthase HEM4 [Thermovibrio ammonificans HB-1]
gi|317113987|gb|ADU96477.1| Uroporphyrinogen III synthase HEM4 [Thermovibrio ammonificans HB-1]
Length = 240
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 68/224 (30%), Gaps = 10/224 (4%)
Query: 15 TQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT--- 71
E++ G + PL + S +S +
Sbjct: 17 LAERLSSEGVEFLATPLIKTVPLEFKPEEVTAFSPDIAVFSSKNGVKHFFTRVDPRELEG 76
Query: 72 -PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
+ A+G A+A + GF+ + + + +++ E L K ++ + K
Sbjct: 77 VTVVAVGSATAKALEELGFSPLVPENFSGEGVVELLKE---LSVKGKKVLIVRPKKARSV 133
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-DAILFYARSSVLYFFSLPLPAK 189
+D+L L Y + + ++ + D F + S+ F S+ +
Sbjct: 134 VQDFLEAQGAELLEAVVYETLPRREVKEELERFFEKKVDYAAFTSPSNFKAFLSVTGREE 193
Query: 190 I--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ L + + AI + + ++ L +
Sbjct: 194 LLKGVKLLPIGHVTQKAIEKAGFKPLEPPREYTVEGIVNRLLKQ 237
>gi|118576538|ref|YP_876281.1| uroporphyrinogen-III synthase/methyltransferase [Cenarchaeum
symbiosum A]
gi|118195059|gb|ABK77977.1| uroporphyrinogen-III synthase/methyltransferase [Cenarchaeum
symbiosum A]
Length = 259
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 67/246 (27%), Gaps = 20/246 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSE 58
I ITR + + + E + G + +P + + ++ + SS+
Sbjct: 6 IAITRSPEDSAQFAELAARDGARAMPLPTIELVPRDDMVDSTLREISENDPDYTVFMSSK 65
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT---- 114
++ L + + + A A + + E+
Sbjct: 66 AVRLLFDAAESESKLEKLQLAVANTSVVAVGPVTRGALEGRGIRVAHTPERYSSVGVGEV 125
Query: 115 ------PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD---IAYPETTMKNLLQ 165
K + D L + + + + Y + + E
Sbjct: 126 FSALGAEGKKVFVPRSGASTPFLRDLLTKMGLDVHELHLYDVRASGGPQWDEFRELLPRG 185
Query: 166 NADAILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D I+F + SSV FF L A++ + + A + T+A
Sbjct: 186 GIDGIVFTSASSVRAFFELMHGAELPEGIRAVAIGPFTADELAKFGVEH-TIAGVHTVPG 244
Query: 224 LLKLLP 229
+
Sbjct: 245 AFDAIK 250
>gi|260431928|ref|ZP_05785899.1| uroporphyrinogen-III synthase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415756|gb|EEX09015.1| uroporphyrinogen-III synthase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 286
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 78/234 (33%), Gaps = 16/234 (6%)
Query: 3 IVITRPIKKALRTQ----EKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
+++TRP + R E+++ V PL ++V + TS+
Sbjct: 48 LLMTRPRAASERFMAQLPERLRSR-VQVVYSPLLDIRPMEQAVD---TTGIRGLIFTSAN 103
Query: 59 SLSTLPANFCRHT-PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
++ A R P + +G A+ ARQ G + A+ +V + + P
Sbjct: 104 GVAAAAAQDVRRDLPAYCVGPATTETARQAG-----WAARMAGETAEELVAKLLKERPDS 158
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY-PETTMKNLLQNADAILFYARS 176
PL++L G+ + L E + +R Y + PE + ++
Sbjct: 159 PLLHLRGEHSRGNIAARLTELGLTVREQPVYRQHLLPLTPEAQAAADGPDPVVAPLFSPR 218
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ F + +S A + + +A P + K +
Sbjct: 219 TARQFAGVWRGTAP-LLVAAISPATAEPLENLAIARLRIAKRPTPKKMRKAVKK 271
>gi|225548235|ref|ZP_03769520.1| hypothetical protein RUMHYD_00214 [Blautia hydrogenotrophica DSM
10507]
gi|225040674|gb|EEG50920.1| hypothetical protein RUMHYD_00214 [Blautia hydrogenotrophica DSM
10507]
Length = 462
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 53/197 (26%), Gaps = 17/197 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
+++TRP EK+++ G + +P + L YG + TS
Sbjct: 255 KVLVTRPKDLISAMSEKLRRKGAEVLELPAIETRPCEDQSRLKRALGELDVYGWVVFTSP 314
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ I AIG + ++G + + +
Sbjct: 315 TGVKVFFEQMREAGCDIRCLGRAKIAAIGSGTKKALEERGLFVDLMP--EIYDGEALGIA 372
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI--AYPETTMKNLLQN 166
+ ++ N + L + + Y + + +
Sbjct: 373 LSRQVQAGERVLIPRASRGNQSLIESLKTVGAKVDDVPTYDTHYARSKIIQEVDEFENGK 432
Query: 167 ADAILFYARSSVLYFFS 183
+F + S+V F
Sbjct: 433 IQCAVFTSASTVKGFVE 449
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 35/140 (25%), Gaps = 8/140 (5%)
Query: 100 INLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
LAK + L ++ K + L + + ++
Sbjct: 237 CELAKRFSWYEELPLAGWKVLVTRPKDLISAMSEKLRRKGAEVLELPAIETRPCEDQSRL 296
Query: 160 MKN--LLQNADAILFYARSSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKN 211
+ L ++F + + V FF A + + A+
Sbjct: 297 KRALGELDVYGWVVFTSPTGVKVFFEQMREAGCDIRCLGRAKIAAIGSGTKKALEERGLF 356
Query: 212 VVTVACFPKETSLLKLLPLR 231
V + +L L +
Sbjct: 357 VDLMPEIYDGEALGIALSRQ 376
>gi|194769278|ref|XP_001966733.1| GF19123 [Drosophila ananassae]
gi|190618254|gb|EDV33778.1| GF19123 [Drosophila ananassae]
Length = 276
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 41/232 (17%), Positives = 71/232 (30%), Gaps = 21/232 (9%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSESLSTLPANF------ 67
E ++K + PV +P F L Y I TS + + +
Sbjct: 23 ETLEKHDFQPVFVPTLSFGFKNLPELRQKLQTPDKYAGIIFTSPRCVEAVAESLNLGQLP 82
Query: 68 --CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTPQKPLIYLG 123
+ +A+GE + LA HGK N+ L IVE PL+
Sbjct: 83 GGWKLLHNYAVGEVTHNLALSSLDQLFTHGKQTGNARALGDYIVETFDGSRDL-PLLIPC 141
Query: 124 GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL----FYARSSVL 179
G L E+ L + Y + ++ + + F++ S V
Sbjct: 142 GNLATDTLLSKLAENGFALDACEVYNTLCHPELAENVERAIATYGDSIEFLAFFSPSGVN 201
Query: 180 YFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + + A+ + V A P L+K+L
Sbjct: 202 CAQEYFRSRNLSMDKWKLVAIGPSTRRALESQGLKVYCTAERPTVEHLVKVL 253
>gi|90406696|ref|ZP_01214889.1| uroporphyrinogen-III synthase [Psychromonas sp. CNPT3]
gi|90312149|gb|EAS40241.1| uroporphyrinogen-III synthase [Psychromonas sp. CNPT3]
Length = 241
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 56/237 (23%), Gaps = 18/237 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSES 59
++ITR A R + + + G + PL E V L Y I S+ +
Sbjct: 5 RLLITRFEPHASRLVKLLNEQGVFSLAQPLLEVQSSAECHDVDLIFVTRYDYIIAISAAA 64
Query: 60 LSTLPANFCR---HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + T F Q+ + + ++ +
Sbjct: 65 VKYTEQALDKKAWPTATFIAVGKRTQKMLQQATQKEVQCPPLQHDTQGLLALACLNCVQG 124
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYA 174
K ++ L G + L + Y I + Q + +
Sbjct: 125 KKILILRGVGGRAKLKKTLESRGAEVSYYQPYQRVVIDLNMDELVENWQLHKINGAIISS 184
Query: 175 RSSVLYFFSLPLP--AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ F + S I + LL L
Sbjct: 185 IELLENFTTRVRDKHWLYELHLYVPSQRILDRALQLGWVKIV---------LLASLA 232
>gi|86158913|ref|YP_465698.1| uroporphyrinogen-III synthase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775424|gb|ABC82261.1| uroporphyrinogen-III synthase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 264
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 24/247 (9%), Positives = 58/247 (23%), Gaps = 18/247 (7%)
Query: 3 IVITRPI--KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
+V+TR + +++++G +P F + L + + TS
Sbjct: 14 VVVTRGKGSEGKDALAVRLEELGAEVRALPSIAFAPPADPAPLDAALRGLERFDWAVFTS 73
Query: 57 SESLSTLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ ++ A A + ++
Sbjct: 74 ANAVDRTVERLRALGLAPAALGRLRLAAVGPATAERLAALVRAPDVVPVEAKGDVLARTL 133
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNA 167
+ +++ L+ L ++ Y +
Sbjct: 134 GEQVRGRRVLFPRPAEGRPETVAGLLAAGAELTAVEAYRTMPAPPEALGCLAGWLAAGEV 193
Query: 168 DAILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
A+ F + S+V + A A+ + V V L
Sbjct: 194 AAVAFASPSAVAAVVGALGDRSALLRGVLIAAIGPTTADALREAGLPVGAVPAHYTGRDL 253
Query: 225 LKLLPLR 231
+ + R
Sbjct: 254 AEAIAAR 260
>gi|221134061|ref|ZP_03560366.1| uroporphyrinogen III synthase HEM4 [Glaciecola sp. HTCC2999]
Length = 249
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 76/240 (31%), Gaps = 17/240 (7%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSESL 60
++ RP K +Q ++ G + + L + + L + TS +
Sbjct: 3 LVLRPEHKIDSSQHAFEQAGIPSIGLALQTILPRDDIAEQVHLVNFHHVDNVIFTSKMAA 62
Query: 61 ST---LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNS--------INLAKIIVEQ 109
+ HT ++A+G+++ Q F ++ I+
Sbjct: 63 QFALPFMPDLSSHTYVYAVGKSTFQTLAQWTHQYPFWCNNHQLMMPLAHQQTSEGILSLP 122
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ ++ ++ + G D L E + Y + P +T + +
Sbjct: 123 SLSDVTEQRIVIVKGLGGRETLRDTLSERGAVVSECTVYERITLNNPVSTQAWQVTDITG 182
Query: 170 ILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYK--NVVTVACFPKETSLLK 226
I + + F + + + ++ +S IA ++++ + +L+
Sbjct: 183 ITATSNEQLQLAFDIYPHSWLTELKWVVVSPRIAQYALKLGIPNQQISISQSADDAALIA 242
>gi|329114336|ref|ZP_08243098.1| Uroporphyrinogen-III Synthase [Acetobacter pomorum DM001]
gi|326696412|gb|EGE48091.1| Uroporphyrinogen-III Synthase [Acetobacter pomorum DM001]
Length = 242
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 91/244 (37%), Gaps = 19/244 (7%)
Query: 1 MY---IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TRP T + G++P+ P Q+ AI +TS
Sbjct: 1 MRPRGVIVTRPEPGLSETMAAVADAGWLPLASPALVVQ---RHTLRLPQKLPAAILLTSG 57
Query: 58 ESLSTLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+++S + + P++A+G+ +A AR GFT + ++ L ++
Sbjct: 58 QAVSAVVVAAQQAKALDMPVYAVGDRTAQRARDAGFTCVKSADGDARALVSLLQTH--QQ 115
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAIL 171
Q L+ G + + + + Y ++ I + +Q +L
Sbjct: 116 PEQGSLLLCSGARQGVELAAWCRQAGFKVMRRVVYAAKPIQKITEQTRTAIQAAKVAVVL 175
Query: 172 FYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F++ S + + A+ A + +S +A + + + V +A ++++
Sbjct: 176 FFSAESAAGWLAALPEAEQKRLAAQARAVVISGRVADVLRNAGWHDVHIAAHVSAAAIME 235
Query: 227 LLPL 230
L L
Sbjct: 236 ALGL 239
>gi|325294748|ref|YP_004281262.1| Uroporphyrinogen III synthase HEM4 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065196|gb|ADY73203.1| Uroporphyrinogen III synthase HEM4 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 246
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 12/221 (5%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANF----CRHTP 72
E ++K G+ PV +PL + S ++ S I+S + + R +
Sbjct: 17 EILKKTGFEPVSIPLIKTVPFEFSAEEVLKFSPNFTVISSKNGVKHFFSKISPEKIRSSK 76
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
A+G ++A ++ G + + L +++ + K + + K
Sbjct: 77 FIAVGSSTAEKLKEIGIESLVPENFSGEGLVELLK---TINLTGKRFLIVRPKVARKVVS 133
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARSSVLYFFSLPLPAKIS 191
++L E ++ + Y + + + ++ + + F + S+ F L
Sbjct: 134 EFLREKGAEVKEVVVYETIVNEDIKEDLIAEIEKGFEILAFTSPSNFKSFLKLTGEKGKV 193
Query: 192 A----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + AI + +L L+
Sbjct: 194 ILNEGKIIPIGHVTQKAIEKLGFKTWKLPSNYTIDGILNLI 234
>gi|116671312|ref|YP_832245.1| uroporphyrinogen-III synthase [Arthrobacter sp. FB24]
gi|116611421|gb|ABK04145.1| uroporphyrinogen-III synthase [Arthrobacter sp. FB24]
Length = 309
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/264 (10%), Positives = 66/264 (25%), Gaps = 38/264 (14%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIAIT 55
+++TR +A +++ G P+++PL F + +Y + I+
Sbjct: 22 RVLVTRSPDRAGALLAALRETGAEPLLLPLIDFERARDLHSLEVAFDALGAGAYTWLVIS 81
Query: 56 SSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
S ++ L R P R++ + L +
Sbjct: 82 SVTTVQALEELARERGSTLSRWLPGSLQVATIGPATRRELELRGITVDLAPARLQSGVGL 141
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT-------MK 161
+ Q + + + L ++ + Y++ D
Sbjct: 142 LDIWPQGQGSVFLPQADIADARLAEGLESLGARVQAVTAYHTVDYPADPARSFTPSVGND 201
Query: 162 NLLQNADAILFYARSSVLYF------------------FSLPLPAKISAAFLCLSNNIAS 203
+ + L F+ + + A+
Sbjct: 202 ASAAPPGTGVLTPAEAKAELDAGRLHAVVAASPSAARRIHAGLSPLGECRFVAIGRSTAA 261
Query: 204 AIPASYKNVVTVACFPKETSLLKL 227
+ V VA P + L+
Sbjct: 262 EAESLGLPVAAVAEEPTTSGLVSA 285
>gi|328541998|ref|YP_004302107.1| Uroporphyrinogen-III synthase [polymorphum gilvum SL003B-26A1]
gi|326411748|gb|ADZ68811.1| Uroporphyrinogen-III synthase [Polymorphum gilvum SL003B-26A1]
Length = 233
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 90/235 (38%), Gaps = 17/235 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++TRP RT ++++ +G+ V PL + F GA+A+TS +L
Sbjct: 1 MRFLVTRPQPDCARTAQRLRALGHEAVEAPLLAIVETPPESF--DLSGVGALAVTSGRAL 58
Query: 61 STLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ L + + P++A+G+ +A AR GF + + LA+ I +
Sbjct: 59 AVLAGHRQQDVLVGLPLYAVGDRTAERARALGFATVIAAGGDVAALAERIA----ADGVR 114
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ ++Y + R E L + R ++ Y S+ + + L S
Sbjct: 115 QTVLYPAARERAGDLEGLLAARGVACRTVEVYRSEPVDALPDAVAAALAAEAFDAVLVYS 174
Query: 177 -----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
++ + PA + +S + + A V A P E +L+
Sbjct: 175 ARTAGALAALLARAGPAARRPRVVAISAAAGAPLDAL--ADVEAADRPDEAALIA 227
>gi|332139556|ref|YP_004425294.1| uroporphyrinogen-III synthetase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549578|gb|AEA96296.1| uroporphyrinogen-III synthetase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 243
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 79/234 (33%), Gaps = 10/234 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSE 58
++ TRP+ K + + G V + S + + + I +TS
Sbjct: 2 LLFTRPLPKLKASALAFENAGIDAVGVATSDIVPVLSEQYAAAEFLSHNAINVIIVTSVY 61
Query: 59 SL----STLPANFCRHTPIFAIGEASACLARQ--KGFTQIFHGKDNSINLAKIIVEQKVL 112
++ S L + A+G+A+A R + + I+ ++
Sbjct: 62 AVDTVVSGLKKTAAAPPLVVAVGDATAHKLRAGLSELSSVNIAIPKVHTSEGILAMHQLN 121
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ ++ + G+ + L E + + Y + + P T + L I+
Sbjct: 122 EANCQQVVIIKGEGGRDAIANGLDEKGMSVNSFCVYKREPLTRPIYTKRWKLGEVSGIIA 181
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + L A ++ +L +S+ IA + V V + +L+
Sbjct: 182 TSEAMALQLIEQFGNALLAYPWLTVSSRIAKTLTNKGIEEVAVCQRATDQALIA 235
>gi|50954012|ref|YP_061300.1| uroporphyrinogen-III synthase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950494|gb|AAT88195.1| uroporphyrinogen-III synthase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 260
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 65/228 (28%), Gaps = 11/228 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ R ++ +G PV+ + F ++ L + + IT
Sbjct: 14 RVLVPRGGPWGDSVAADLRAVGASPVVAAMINFAPAADASALERALHRLAAGEFDWVTIT 73
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFH--GKDNSINLAKIIVEQKVLF 113
S+ ++ L A+ P I A + ++ E +
Sbjct: 74 SATTVDVLSASRAVVPPRTRIAAVGETTAAALTAASYKMDLVPAEDNSAHGLLAEWEAAT 133
Query: 114 TPQ--KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAI 170
Q ++ L + L + + Y + + PE+ + ++ Q AI
Sbjct: 134 QGQVPLRILTLRSDIAKPLLTEGLRRIGHDVDSVVAYRTIGVTVPESVVADVRQGLVQAI 193
Query: 171 LFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L + S P S + A V VA
Sbjct: 194 LVTSGSVAEQVQLQLGPIPESTLVAAIGPRTARDARDCGLRVDVVAEE 241
>gi|255713954|ref|XP_002553259.1| KLTH0D12606p [Lachancea thermotolerans]
gi|238934639|emb|CAR22821.1| KLTH0D12606p [Lachancea thermotolerans]
Length = 257
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/234 (14%), Positives = 70/234 (29%), Gaps = 25/234 (10%)
Query: 19 IQKMGYIPVMMPLSYFIHDRES-VFLAMQQSY----GAIAITSSESLSTLPANFCR---- 69
++ G+ PV +PL H + L +Y I I+S ++ L +
Sbjct: 24 FEENGFTPVFVPLIEHKHLPHECLALFQDDNYLRQLRHIVISSQRTVECLNESIIPRLTA 83
Query: 70 ------HTPIFAIGEASACLARQKGFTQIFH---GKDNSINLAKIIVEQKVLF-----TP 115
H + + ++ + N LA +I+ + +
Sbjct: 84 QQRDDLHNKVVYTVGPATASFLERCGFKNVRGGIHAGNGDILADLIIAELKGDESSDVSC 143
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ L G+ R L I R + Y ++ + + ++F++
Sbjct: 144 LPEILLLVGETRRDIIPKKLTSAGISSRELVTYQTKTLDDNFRRFEQCYSPHSWVVFFSP 203
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
C+ ++ N V+ P+ SLL+ L
Sbjct: 204 QGAGEIVEYLQRNP--VNVACIGPTTEKSLSKKGLNPTVVSQKPEPHSLLESLE 255
>gi|313124931|ref|YP_004035195.1| uroporphyrinogen-iii synthase [Halogeometricum borinquense DSM
11551]
gi|312291296|gb|ADQ65756.1| uroporphyrinogen-III synthase [Halogeometricum borinquense DSM
11551]
Length = 247
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/236 (13%), Positives = 68/236 (28%), Gaps = 21/236 (8%)
Query: 2 YIVITRPIKKA-LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+ + RP E + +G P+ P+ AM S + +TS +
Sbjct: 6 RVAVFRPDDDRMSDAVELLDSLGATPIPDPMLAVEPT-----GAMPDSGDYVILTSKTGV 60
Query: 61 STLPANFCRHT--PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
L + + IG A+A AR G++ ++ + + +VE+
Sbjct: 61 ELLAEDGWEPNGSTLACIGPATADAARDSGWSVDIVPEEYTSSG---LVERLRDDVANAT 117
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS-S 177
+ + D L E L Y + + + + ++ S +
Sbjct: 118 VEVARSDHGSDVLTDGLREAGADLHETVLYRLVRPEGAGQSTVMVAGDEVEGVCFSSSLT 177
Query: 178 VLYFFSLPLP--------AKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSL 224
V F +++ + + + NV V L
Sbjct: 178 VENFLDAAAERGVREEVIEGLNSLVVGVIGPPTRETAESYGINVDVVPENADFEEL 233
Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ + D ++ +++ V + C+ A A S +V V
Sbjct: 44 AMPDSGDYVILTSKTGVELLAED-GWEPNGSTLACIGPATADAARDSGWSVDIVPEEYTS 102
Query: 222 TSLLKLL 228
+ L++ L
Sbjct: 103 SGLVERL 109
>gi|296131261|ref|YP_003638511.1| Uroporphyrinogen III synthase HEM4 [Cellulomonas flavigena DSM
20109]
gi|296023076|gb|ADG76312.1| Uroporphyrinogen III synthase HEM4 [Cellulomonas flavigena DSM
20109]
Length = 362
Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/228 (12%), Positives = 61/228 (26%), Gaps = 24/228 (10%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPANFCRHT------- 71
P+++PL + + L Y + +TS +++ L H
Sbjct: 113 EPLVVPLVRTVPVDDLSPLDDALLALGAGWYSWLTVTSQAAVAVLAEQAAAHDDGLAALV 172
Query: 72 -----PIFAIGEASACL----ARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
+ A+G +A + + A + ++
Sbjct: 173 ERGGARVGAVGPGTARALEGLGVRVDVVPPVRSTAVDLVAALVAAAPGTRPDAGPRTLFP 232
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSVLY 180
G D L + + Y + P+ + + + A L + SSV
Sbjct: 233 RGDLAAPTLADGLTAAGWAVDDLVVYRTVPAGPPDPQVADAWAGGDVHAALLTSASSVRA 292
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
P + + + + + V VA L+ L
Sbjct: 293 LLDHLGPPPPATRVVVIGPSTETEARRMGLRVDAVAGRQTLAGLVDAL 340
>gi|325959843|ref|YP_004291309.1| Uroporphyrinogen-iii synthase [Methanobacterium sp. AL-21]
gi|325331275|gb|ADZ10337.1| Uroporphyrinogen-III synthase [Methanobacterium sp. AL-21]
Length = 261
Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 69/251 (27%), Gaps = 29/251 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSSE 58
I ITRP ++ +++ G ++ P + L + TS
Sbjct: 11 IGITRPEERVKEAVAIVEEHGGTALVAPTLELQ-VSNTQSLIQLCEMAGELDWLIFTSPT 69
Query: 59 SLSTLPAN-------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ ++ + + I IG + +KG + + ++ +
Sbjct: 70 GIISVFKHCSDLKTRLNPNCKIAVIGPRTENYLEKKGLKADIVPESYTA--EGLLECFED 127
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----PETTMKNLLQNA 167
K + L + V + Y S + L +
Sbjct: 128 HDLKNKKIGIPRTLAARDALPTGLKVMGADVFVAEAYKSDLPKDRTRVNQLVEAILNRKI 187
Query: 168 DAILFYARSSVLYFFSLPLPAKIS----------AAFLCLSNNIASAIPASYKNVVTVAC 217
+A+ F + +V F + + + A + V +
Sbjct: 188 NALTFTSTLTVKNLFDMLDETEKQDVVDILKSDDVVVAAIGPVTAMPLHELDI-DVLIPE 246
Query: 218 FPKETSLLKLL 228
+++L++L
Sbjct: 247 KYTVSAMLEIL 257
>gi|56751250|ref|YP_171951.1| porphyrin biosynthesis protein HemD [Synechococcus elongatus PCC
6301]
gi|81299083|ref|YP_399291.1| uroporphyrinogen-III synthase [Synechococcus elongatus PCC 7942]
gi|1170219|sp|P42452|HEM4_SYNE7 RecName: Full=Uroporphyrinogen-III synthase; Short=UROS; AltName:
Full=Hydroxymethylbilane hydrolyase [cyclizing];
AltName: Full=Uroporphyrinogen-III cosynthase
gi|1084172|pir||S42534 uroporphyrinogen III synthase - Synechococcus sp
gi|471285|emb|CAA50303.1| uroporphyrinogen-III synthase [Synechococcus elongatus PCC 7942]
gi|56686209|dbj|BAD79431.1| porphyrin biosynthesis protein HemD [Synechococcus elongatus PCC
6301]
gi|81167964|gb|ABB56304.1| uroporphyrinogen-III synthase [Synechococcus elongatus PCC 7942]
Length = 264
Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 66/247 (26%), Gaps = 20/247 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSSE 58
I+ TR ++ +++ G + MP +A + + + S+
Sbjct: 11 ILTTRAAGQSSPFAAQLRAAGAAVIEMPTLEIGPPSSWLPLDEAIAAIADFDWLILASAN 70
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQ-----IFHGKDNSINLAKIIVEQKVLF 113
++ + ++ + + QK +A+ +VE
Sbjct: 71 AVEAVQQRLAAQQKSWSDVPCAIAVVGQKTAQVLAAQGGKADYIPPEFIAESLVEHFPQP 130
Query: 114 TPQKPLIYLGGKPRNFHFEDY-LIEHKIPLRVIDCYYSQDIA--YPETTMKNLLQNADAI 170
+ L++ + L + + Y S+ + + + + + I
Sbjct: 131 VAGQRLLFPRVETGGREQITQALQSQGAIVVEVPAYESRCPSQIPDDALIALRQAHLNLI 190
Query: 171 LFYARSSVLYFFSLPLPAK--------ISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
F + +V F L A + + V A
Sbjct: 191 SFTSSKTVRNFCQLMASNLGVDWSARISGVAIASIGPQTSITCQELLGRVEVEAQEYTLD 250
Query: 223 SLLKLLP 229
LL +
Sbjct: 251 GLLLAIE 257
>gi|332531339|ref|ZP_08407247.1| uroporphyrinogen III synthase [Hylemonella gracilis ATCC 19624]
gi|332039203|gb|EGI75621.1| uroporphyrinogen III synthase [Hylemonella gracilis ATCC 19624]
Length = 287
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 76/285 (26%), Gaps = 55/285 (19%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--------LAMQQSYGAI 52
M +++TRP ++A E +++ G+ +PL + A + + A+
Sbjct: 1 MRVIVTRPAREAQEWVEVLRRAGWQAEPLPLIEIAPAPKPDAVPRVWAQLDADPRHWQAM 60
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASA----CLARQKGFTQIFHGKDNSIN 101
S+ ++ L A +A G +A +
Sbjct: 61 MFVSANAVEGLCAARRGWALPQTQGPQAWATGPGTARALAAAGWPAECIVAPPDDAPQFD 120
Query: 102 LAKIIVEQKVLFTPQKPLIYLG--------------------------GKPRNFHFEDYL 135
+ ++ + F L
Sbjct: 121 SEALWARVARRVQADWRVLIVRGADAQDLPETSPGASGPDPARLESLSNGAGRDWFAQRL 180
Query: 136 IEHKIPLRVIDCYYSQDIAYPET-----TMKNLLQNADAILFYARSSVLYFFSLPL-PAK 189
E + + Y + A+ + ++ LF + ++ SL
Sbjct: 181 REAGAQVDFVVSYQRRAPAWTPDSAPFALARAAARDGAVWLFSSSEALRNLRSLLPDQDW 240
Query: 190 ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL---PLR 231
+A L IA A + + ++ P T + + L R
Sbjct: 241 RAARALVTHERIARAARDAGFGDIAMS-RPALTDVREALTAFARR 284
>gi|327479189|gb|AEA82499.1| uroporphyrinogen-III synthase [Pseudomonas stutzeri DSM 4166]
Length = 256
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 69/230 (30%), Gaps = 17/230 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
+++TRP ++ + + G +PL ES + Y A+ + S
Sbjct: 5 RLLLTRPAEECEALAATLAEAGVHSSSLPLLAIEPLPESAEQRATILELDRYCAVVVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKG--------FTQIFHGKDNSINLAKIIVEQ 109
+ + P G+A + G D+S L +
Sbjct: 65 PAARLGLELLDSYWPQPPFGQAWFSVGGATGAILEAYGLDVSWPERGDDSEALLALPRLA 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-- 167
+ L P ++ + G+ + L + + ++ Y YP T+ ++++
Sbjct: 125 QALARPDPKVLIMRGEGGREFLAETLRGRGVQVDFLELYRRSLPDYPPGTLVQVVRSERL 184
Query: 168 DAILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVT 214
+ ++ + +L L S +A +
Sbjct: 185 NGLVVSSGQGLLSLHELAADTWRELCELPLFVPSPRVAEMARQLGAKRIV 234
>gi|75909283|ref|YP_323579.1| uroporphyrinogen-III synthase [Anabaena variabilis ATCC 29413]
gi|75703008|gb|ABA22684.1| uroporphyrinogen-III synthase [Anabaena variabilis ATCC 29413]
Length = 276
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/253 (13%), Positives = 78/253 (30%), Gaps = 24/253 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++T P A R +I G +P++MP + ++ + IA TS
Sbjct: 17 RILVTAPRNYASRLSAQIICKGGLPILMPTIETCYLPNFSQLDAVISCINEFDWIAFTSR 76
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ ++ + A+G+ L G + + + + +
Sbjct: 77 NGIIAFFERLHNLDISINKLQNCQLCALGKDIDVLLSLFGRVDLIPDESSPAGIVAKFSQ 136
Query: 109 QK-----VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ P +I + +F L + + + + Y +Q + +++
Sbjct: 137 IHGISRQKILVPVPEVIGIPEPNIVPNFIKDLEKLGMQVIRVPTYITQSLDKNIYSVEIN 196
Query: 164 LQNA---DAILFYARSSVLYFFSLP--LPAKISAAFLCLSNNIASAIPASYKNVVTVA-C 217
L D I F + + + F + C A+ +V V+
Sbjct: 197 LIQQGLIDVIAFSSTAEIESFLKMFNSKNEFQHCVVACFGPYTAANAQKLGLDVSLVSTD 256
Query: 218 FPKETSLLKLLPL 230
F ++ +
Sbjct: 257 FSSFEGFVEAIVK 269
>gi|56698664|ref|YP_169041.1| uroporphyrinogen-III synthase, putative [Ruegeria pomeroyi DSS-3]
gi|56680401|gb|AAV97067.1| uroporphyrinogen-III synthase, putative [Ruegeria pomeroyi DSS-3]
Length = 237
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 73/229 (31%), Gaps = 14/229 (6%)
Query: 6 TRPIKKALRTQEKIQ---KMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL-S 61
TRP + R ++ + V PL E++ + TSS +
Sbjct: 2 TRPRGASERFVAGLRPEIREALSVVYSPLLRIEPTVETLDFGPAA---GLIFTSSNGVGI 58
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
+ R P F +G A+ Q + A+ ++ + P PL++
Sbjct: 59 AARLSADRRLPCFCVGRATTR-----MAAQAGWSATMAGESAEALIAGLLAQRPDTPLLH 113
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-QNADAILFYARSSVLY 180
L G+ L + Y + + + + + L + ++ +
Sbjct: 114 LRGEHGRGEVAANLTRMGLRTEERVIYAQRLLPFSDEALAVLAGDDRVIAPLFSPRTARQ 173
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F L + + + +S +A + + + V A P ++ +
Sbjct: 174 FAGLVR-GQAPLSVVAMSVAVAKPLENTPLSQVLTATAPDADAMRAAIE 221
>gi|295687519|ref|YP_003591212.1| Uroporphyrinogen III synthase HEM4 [Caulobacter segnis ATCC 21756]
gi|295429422|gb|ADG08594.1| Uroporphyrinogen III synthase HEM4 [Caulobacter segnis ATCC 21756]
Length = 228
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 12/229 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+ ITR A T K+ +G+ PV+ PL SV L+ A+A TS +
Sbjct: 7 VWITRAHPGAEATAAKVAALGFTPVVDPLLAVAPIAASVDLSGIA---AVAFTSVNGVQA 63
Query: 63 LPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
R P+F +G A+A A + GF+ + + +LA++I + P+++
Sbjct: 64 FSKLAGARDLPVFTVGRATASAASEAGFSSVSSADGDVADLARLIAAARP-----GPVLW 118
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
G + L + + R + Y + D E T+ LL +L ++ +
Sbjct: 119 AGAREPAGDLVAMLNDAGVAARGVAIYETVDRPPSEATL-ALLDRPLTVLLHSPRAARVL 177
Query: 182 FSLPLPAKISA-AFLCLSNNIASAIPASYKN-VVTVACFPKETSLLKLL 228
+ SA LCLS +A+ + A + V A P ET+LL LL
Sbjct: 178 AEILRRRPASALRTLCLSEAVAAPLEALAERGSVAFAPRPDETALLSLL 226
>gi|166033240|ref|ZP_02236069.1| hypothetical protein DORFOR_02965 [Dorea formicigenerans ATCC
27755]
gi|166027597|gb|EDR46354.1| hypothetical protein DORFOR_02965 [Dorea formicigenerans ATCC
27755]
Length = 497
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 66/225 (29%), Gaps = 8/225 (3%)
Query: 14 RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT-- 71
+ +Q++G + + + + S F S I TS + N +
Sbjct: 274 KLITDLQQLGADVDTIMVGKILPIQISDFEKEISSSDWILFTSRNGVRAFFYNMKFNDTD 333
Query: 72 -----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKP 126
I A K + + A + K + Q + K
Sbjct: 334 IRCLAKIRFGVVGKATEQELKNYQIKADLVPDEQTGAGLAKALKKQISDQTKVCIFSAKE 393
Query: 127 RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPL 186
+ E L + + D Y + +++ + +K +F + S+V FF +
Sbjct: 394 ASEDLERELQKF-CHVIKTDAYENVNVSEQDYILKPADTVISEAVFTSASNVERFFQMLT 452
Query: 187 PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ + A+ + + S++ L+ +
Sbjct: 453 EEIMVERAYSIGKKTTEALKKKNVMNICESEESTYESVVSLITKK 497
>gi|254447512|ref|ZP_05060978.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
gi|198262855|gb|EDY87134.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
Length = 618
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/238 (11%), Positives = 74/238 (31%), Gaps = 12/238 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSS 57
++ITR K+A I+ G + + + A Y S+
Sbjct: 9 RVLITRTAKQAKPLLTLIEAEGGMGTPAGVLSIEADYGDPSVTAAKAALDQYHRFIFVSA 68
Query: 58 ESLS---TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
++ + + +G + Q G++ + + N ++ +
Sbjct: 69 NAVEHGLAALGSLPDEARLACVGRKTRQTLEQAGYSVADCPESDF-NSEALLALPSLQNV 127
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN---ADAIL 171
+ ++ + G D L + + ++CY+ Q +++ +++
Sbjct: 128 DGERILIVRGHGGRQLIRDTLQQRGAQVDSVECYHRQLSDGDFRPLQDAIESGAFDVICP 187
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV-TVACFPKETSLLKLL 228
+ S L + P + S + +S + + +A + S+ L
Sbjct: 188 SSSESLALLSQACPSKSLKSLPLIAVSATMQDKARELGFTQIAAMAKDATDESIFDAL 245
>gi|254430751|ref|ZP_05044454.1| uroporphyrinogen-III synthase [Cyanobium sp. PCC 7001]
gi|197625204|gb|EDY37763.1| uroporphyrinogen-III synthase [Cyanobium sp. PCC 7001]
Length = 272
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 62/247 (25%), Gaps = 22/247 (8%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSESL 60
+TR + + ++ G + +P LA + + + +S +
Sbjct: 3 VTRAETQLGEARRLFEQAGASVLDLPALVVTPPDTWGPLDDALAELEDFHWLVFSSGNGV 62
Query: 61 STLPANFC-------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ R I A Q +A ++E +
Sbjct: 63 DAVERRLQLRGSGLARRPRSLRIAAVGRKTAAQLEAIGAPADFIPPRFVADSLLEHFPVS 122
Query: 114 TPQKPLIYLG-GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AI 170
L+ + E + + Y ++ A T L+ AI
Sbjct: 123 GWGLRLLLPRVQSGGRTLLAEAFAEAGARVVEVAAYETRCPAGLPTAAVAALEGRRLDAI 182
Query: 171 LFYARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
F + +V + L A + + + + + V A
Sbjct: 183 TFSSAKTVSHTAQLLEGAFGTPWRELLRDVALVSIGPQTSQRLNTTLGRVDAEADPHDLE 242
Query: 223 SLLKLLP 229
L++
Sbjct: 243 GLVQACA 249
>gi|289581678|ref|YP_003480144.1| uroporphyrinogen III synthase HEM4 [Natrialba magadii ATCC 43099]
gi|289531231|gb|ADD05582.1| Uroporphyrinogen III synthase HEM4 [Natrialba magadii ATCC 43099]
Length = 242
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/248 (10%), Positives = 56/248 (22%), Gaps = 27/248 (10%)
Query: 1 MY---IVITRPIKKALRTQ---EKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAI 54
M + + RP R E + +G V P+ + + + +
Sbjct: 1 MRDLSVAVFRP--DDERLADAVELLDSLGATAVSDPMLAV----DPTDAVPRTDADYVVL 54
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
TS + + + + + ++ E +
Sbjct: 55 TSKTGVELVAETDWEPGEATVCAIGPKTADAIRAAGYEVDIVPDEYTSSGLVAELESALD 114
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM-KNLLQNADAILFY 173
+ + D + Y + + + DA F
Sbjct: 115 G-ARVEVARSDHGSPVLLDGFEAAGAYVHETVLYQLVRPEGSGESAERAAAGDLDAACFT 173
Query: 174 ARSSVLYFFSLPLPA---------KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ +V +F A + +V VA +L
Sbjct: 174 SSLTVEHFLEAAAERDVRADALAGLEDATVGVIGEPTRETAAEFGIDVDLVASEATFNAL 233
Query: 225 ----LKLL 228
++LL
Sbjct: 234 ARETVELL 241
Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ +++ V + A + A AI A+ V V + L+ L
Sbjct: 51 YVVLTSKTGVE-LVAETDWEPGEATVCAIGPKTADAIRAAGYEVDIVPDEYTSSGLVAEL 109
Query: 229 P 229
Sbjct: 110 E 110
>gi|260061597|ref|YP_003194677.1| putative uroporphyrinogen-III synthase [Robiginitalea biformata
HTCC2501]
gi|88785729|gb|EAR16898.1| possible uroporphyrinogen-III synthase [Robiginitalea biformata
HTCC2501]
Length = 248
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/246 (12%), Positives = 63/246 (25%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAI 52
M I++++P + I+K P + Y AI
Sbjct: 1 MKVKTILVSQPEPKMENSPYSRLIEKEKVKVDFRPFIHVEGVDAKAVRQQKIDISKYTAI 60
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS S+ F EA A ++ + N +
Sbjct: 61 ILTSRNSVDHFFRIAEEMRFKVPDTMKYFCQSEAVAYYLQKYVVYRKRKIYVGKRNFVDL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ K + + + L + I Y + +
Sbjct: 121 LPLFKKY--KDEVYLLPSSDVLKPQVPETLDQAGINWTRGIFYRTVISDLSD----LRNV 174
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + + + N+ +A + + A P+ S+
Sbjct: 175 YYDILVFFSPSGIESLLKNFPDFEQNNTRIAVFGNSTINAATDAGLRIDIKAPTPETPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALQK 240
>gi|159045956|ref|YP_001534750.1| uroporphyrinogen-III synthase [Dinoroseobacter shibae DFL 12]
gi|157913716|gb|ABV95149.1| uroporphyrinogen-III synthase [Dinoroseobacter shibae DFL 12]
Length = 238
Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/227 (11%), Positives = 71/227 (31%), Gaps = 14/227 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGA-IAITSSESLS 61
+++TRP ++ + + PV+ P+ + + A + TS ++
Sbjct: 9 VLLTRPRAQSEQFAATL-----PPVLRPVISPLLHILHLDDLPPAPETATLIFTSGNGVT 63
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
+ + ++ + + P ++
Sbjct: 64 AYATQHPGIGQSALCVGTKTTAIARDLGFDAISAEGDARAILDLAAAYP------GPFVH 117
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
+ GK L + + I Y + T + +L+ A+ ++ + F
Sbjct: 118 VRGKHTTGDIAGALRDLGKEVAEIIAYDQTPVELS-ETARAILEGPCAVPLFSPRTACLF 176
Query: 182 FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ A+ A + +S +A +P + +++ P ++ L
Sbjct: 177 TNACPTART-AQIIAMSPAVAEQLPEHAYSGISILEKPNAAAMRDAL 222
>gi|224476760|ref|YP_002634366.1| putative uroporphyrinogen III synthase [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222421367|emb|CAL28181.1| putative uroporphyrinogen III synthase [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 229
Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 55/212 (25%), Gaps = 8/212 (3%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLA 84
+ +P + L Y I +S ++ F + +
Sbjct: 19 DIIHLPFIKIKPLSFNEALLN-HHYDWIIFSSKNAVKYFRDYFQQLNVDYVAAIGEKTKD 77
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+ + I E KV +I + L E +
Sbjct: 78 YCNQVGISVDFFPKNFSQEGFIDEFKVNQGD--RIIIPSSAAARPFLQKELQEKNAEVVK 135
Query: 145 IDCYYSQDIAYPETTMKNLLQNA--DAILFYARSSVLYFFSLPLPAKISA--AFLCLSNN 200
ID Y + +LL+ + I F + S+ FF + + + +
Sbjct: 136 IDLYEPEAYTENILQAISLLKRNLANGIAFASSSAADNFFKEAENLNLDSNYNYYAIGRP 195
Query: 201 IASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
I +A LLK++ R
Sbjct: 196 TFEKIEEYGYTA-KIAEEQTIDGLLKIIKESR 226
>gi|74318585|ref|YP_316325.1| uroporphyrinogen-III synthase [Thiobacillus denitrificans ATCC
25259]
gi|74058080|gb|AAZ98520.1| uroporphyrinogen-III synthase [Thiobacillus denitrificans ATCC
25259]
Length = 252
Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 70/238 (29%), Gaps = 15/238 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSES 59
I++TR ++A I+ G P F LA + + S +
Sbjct: 10 ILVTRAPRQAAALSAAIRAAGGSAFEFPALAFEAVPVDRLQASLAQVVAADFVIFVSPNA 69
Query: 60 LSTLPA---NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
A + + A+G +A +G + + + ++ ++L
Sbjct: 70 AEFGMAAIGSLAAGRSVLAVGPGTARALAAQGLDAVITP--DGQDSEALLALPQLLDVDG 127
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYA 174
K ++ + G D L + ++CY + Q DA+ +
Sbjct: 128 KRVVIVRGIGGRALLGDTLAARGAEVHYMECYRRLAPTADAAPLIARWQAGGIDAVTVAS 187
Query: 175 RSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ +L A IA+A + A + L+ L
Sbjct: 188 AETLHNLAALLGEAGAPLLAHTPLFAPYEKIAAAARSFGVAQ-ATATPGGDAGLVAGL 244
>gi|198469308|ref|XP_001354986.2| GA15099 [Drosophila pseudoobscura pseudoobscura]
gi|198146809|gb|EAL32042.2| GA15099 [Drosophila pseudoobscura pseudoobscura]
Length = 287
Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/247 (17%), Positives = 80/247 (32%), Gaps = 22/247 (8%)
Query: 3 IVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ---SYGAIAITSSE 58
++I + + E + + PV +P F Q Y I TS
Sbjct: 8 VIIFKSESDSTDVYAETLLGHNFNPVFVPTLCFGFKNLQELGNKLQTPDKYAGIIFTSPR 67
Query: 59 SLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVE 108
+ + + +A+GE + LA HGK N+ NL + IV+
Sbjct: 68 CVEAVNEALLLGELPGGWKLLHNYAVGEVTHNLALSTLQQLFTHGKQTGNARNLGEYIVD 127
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
PL+ G L E+ + + Y ++ ++ L+ A
Sbjct: 128 TFDGSRDL-PLLLPCGNLATDTLLSKLAENGFCVDACEVYETKCSPQLGECVERALKEAG 186
Query: 169 AIL----FYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ F++ S V IS + + + A+ + + V A P
Sbjct: 187 DSVEFLAFFSPSGVACAMEYFRAHNISLEPWKLVAIGPSTRRALESQGQKVYCTAERPTV 246
Query: 222 TSLLKLL 228
L+K+L
Sbjct: 247 EHLVKVL 253
>gi|332995106|gb|AEF05161.1| uroporphyrinogen-III synthetase [Alteromonas sp. SN2]
Length = 255
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/235 (14%), Positives = 81/235 (34%), Gaps = 12/235 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV-----FLAMQQSYGAIAITSS 57
++ITRP+ K + + ++ G + + S FL S I +TS
Sbjct: 14 LLITRPLPKLQASADAFEQAGIDTIGVATSDIQSIPSKAGKLQQFLLGSPSINIIIVTSI 73
Query: 58 ESLSTLPANFCR------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ + + A+G+A+A + I+V Q++
Sbjct: 74 YAVPAALHALNQASFLSAPPTLIAVGDATANALHSANLPLKI-VTPSLHTSEGILVMQQL 132
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
++ + G+ L E I + Y + + P T + + + I+
Sbjct: 133 NEANCTQVVIIKGEGGRDKLSHVLGERGISVTEFCVYKREPLTNPIYTKRWKIGDVSGII 192
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + S ++ +L +S +A+++ V+V + +L+
Sbjct: 193 ATSENLAKQLISTHSRQILALPWLTVSERVATSLRNLGIARVSVCNRATDQALIA 247
>gi|325285898|ref|YP_004261688.1| Uroporphyrinogen III synthase HEM4 [Cellulophaga lytica DSM 7489]
gi|324321352|gb|ADY28817.1| Uroporphyrinogen III synthase HEM4 [Cellulophaga lytica DSM 7489]
Length = 250
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 63/246 (25%), Gaps = 22/246 (8%)
Query: 1 MYI---VITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAI 52
M I ++++P + I+K P + ++ AI
Sbjct: 3 MKIKTILVSQPEPKMENSPYSRLIEKEKLKVDFRPFIHVEGVDAKTVRQQKIDLNNFTAI 62
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS S+ F EA A ++ + A +
Sbjct: 63 VLTSRNSVDHFFRIAEEMRFKVPDSMKYFCQSEAVAYYLQKYVVYRKRKIYVGKRMFADL 122
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + + L + + Y + +
Sbjct: 123 APL--LKKYKTEKFLLPSSDVLKPIVPETLDGLGLDWKRAIFYKTVISDLSD----LRDV 176
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + + + N +A + + +A P+ S+
Sbjct: 177 YYDILVFFSPSGIESLLKNFPDFEQNDTKIAVYGNTTVNAATDAGLRIDILAPTPETPSM 236
Query: 225 LKLLPL 230
L
Sbjct: 237 TMALQK 242
>gi|300709479|ref|YP_003735293.1| uroporphyrinogen-III synthase [Halalkalicoccus jeotgali B3]
gi|299123162|gb|ADJ13501.1| uroporphyrinogen-III synthase [Halalkalicoccus jeotgali B3]
Length = 247
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/235 (11%), Positives = 64/235 (27%), Gaps = 19/235 (8%)
Query: 2 YIVITRPI-KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
I + RP ++ + ++ +G V P+ ++ +TS +
Sbjct: 6 RIAVFRPDDERLSEAVDLLESLGADAVPDPMLAVEPTGA----RPREDADFTVLTSKTGV 61
Query: 61 STLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + AIG+ + R+ G+ ++ S + +V +
Sbjct: 62 ELAREAGWHPSGTVCAIGDRTGRALREAGYEVDLIPEEFSSSG---LVRALEGEVAGACV 118
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM-KNLLQNADAILFYARSSV 178
+ D L E + Y ++ + + LF + +V
Sbjct: 119 EVARSDHGSPVLTDGLNEAGAYVHETVLYELVRPPESGVSVERAAAGELEGALFTSSLTV 178
Query: 179 LYFFSLPLP--------AKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSL 224
+F + +S + + + V V L
Sbjct: 179 EHFLAAADERGLREEAVDGLSTSIVGAIGAPTRETAARKGIAVDVVPDAASFEEL 233
Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 6/60 (10%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ +++ V S + + A+ + V + + L++ L
Sbjct: 53 TVLTSKTGVELAREA--GWHPSGTVCAIGDRTGRALREAGYEVDLIPEEFSSSGLVRALE 110
>gi|256833701|ref|YP_003162428.1| Uroporphyrinogen III synthase HEM4 [Jonesia denitrificans DSM
20603]
gi|256687232|gb|ACV10125.1| Uroporphyrinogen III synthase HEM4 [Jonesia denitrificans DSM
20603]
Length = 284
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 66/255 (25%), Gaps = 30/255 (11%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSS 57
+I RP +A +I G V PL A +Y +A+TS
Sbjct: 14 LILRPEGRATPLITRITHAGGHTVTAPLITREPITTDQRATLDTHTAALHTYAWVAVTSV 73
Query: 58 ESLSTLPANFCRHTPIF-------------AIGEASACLARQKGFTQIFHGKDNSINLAK 104
++ L A+ R P + L ++++ +
Sbjct: 74 NAVDELIASIQRTHPTTPLTTVCTTTQWASVGPATTRALRAHGITVAWEATENSASGMLA 133
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL- 163
P+ ++ G E L + Y + P + +
Sbjct: 134 QWPAANTHTDPRTAVLLPLGNLATTQLETGLTSAGYTPTRVTTYLTVAHPAPPSALAAWR 193
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVV 213
DA++ + S V F + F+ + A +
Sbjct: 194 AGRIDAVILTSGSIVEQFVAQFGHPSPGPGPAQGNEDRPVFVAIGEPTRRAAQRHSLPID 253
Query: 214 TVACFPKETSLLKLL 228
VA L+ L
Sbjct: 254 AVARQASTAGLVDAL 268
>gi|242005367|ref|XP_002423540.1| Uroporphyrinogen-III synthase, putative [Pediculus humanus
corporis]
gi|212506669|gb|EEB10802.1| Uroporphyrinogen-III synthase, putative [Pediculus humanus
corporis]
Length = 311
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 85/233 (36%), Gaps = 25/233 (10%)
Query: 17 EKIQKMGYIPVMMPLSY---FIHDRESVFLAMQQSYGAIAITSSESLSTLPANF------ 67
E G+ +++P+ + ++ L ++Y I TS S+ L +
Sbjct: 80 ETFLSKGFNTILIPVLDFDFINIEELTIKLNNHKNYSGIIFTSPRSVLGLKLSLDNNDNK 139
Query: 68 -----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
++ + IGE + LA+ GF N LA++I ++ + +KP +YL
Sbjct: 140 EIINQWKNHTNYVIGEKTEKLAKDLGFITRGKETGNGDALAELICKK----SFEKPFLYL 195
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----NLLQNADAILFYARSSV 178
G +F+ L ++ I + + Y ++ + E + + ++++ S V
Sbjct: 196 IGSLTQKNFKIKLEKNNIKVDDLVIYKTKPHSDLEENILKLKLEINDKPAYFIYFSPSGV 255
Query: 179 LYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
Y + + F+ + + V + P LL +
Sbjct: 256 NYTIPILKKLNYNFEFIKFVAIGPTTEKQLIEFGFKVFKTSLEPNPKYLLDSI 308
>gi|322787274|gb|EFZ13410.1| hypothetical protein SINV_07574 [Solenopsis invicta]
Length = 259
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 77/232 (33%), Gaps = 20/232 (8%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHD---RESVFLAMQQSYGAIAITSSESLSTL--------- 63
E ++ GY + F L+ Y + +TS ++ +
Sbjct: 25 VETLESAGYNCEYLQTLQFEFVNISELRACLSEADKYSGLILTSPRTVEAVALAAKEDKN 84
Query: 64 PANFCRHTPIFAIGEASA--CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
P + +G A+ + I NS LA+ IV + KPL+Y
Sbjct: 85 ILCHWEQMPAYCVGPATDSLAKNQLNLQHCIGSHTGNSKQLAEKIVLDVKRDS--KPLLY 142
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARSSVLY 180
G+ + + I L I Y + + E + +L D +F++ S+V
Sbjct: 143 PCGEIARETISCIVGDSGILLEKIVVYRTLESKTLEQELPKILAKSPDIFVFFSPSTVEC 202
Query: 181 FFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + + + A+ S NV A P+ +L++ +
Sbjct: 203 ITAQLKKNFFNVKDIKAVAIGPVTRDALINSGFNVYATADKPEPAALMRAIK 254
>gi|258541893|ref|YP_003187326.1| uroporphyrinogen-III synthase [Acetobacter pasteurianus IFO
3283-01]
gi|256632971|dbj|BAH98946.1| uroporphyrinogen-III synthase [Acetobacter pasteurianus IFO
3283-01]
gi|256636028|dbj|BAI01997.1| uroporphyrinogen-III synthase [Acetobacter pasteurianus IFO
3283-03]
gi|256639083|dbj|BAI05045.1| uroporphyrinogen-III synthase [Acetobacter pasteurianus IFO
3283-07]
gi|256642137|dbj|BAI08092.1| uroporphyrinogen-III synthase [Acetobacter pasteurianus IFO
3283-22]
gi|256645192|dbj|BAI11140.1| uroporphyrinogen-III synthase [Acetobacter pasteurianus IFO
3283-26]
gi|256648247|dbj|BAI14188.1| uroporphyrinogen-III synthase [Acetobacter pasteurianus IFO
3283-32]
gi|256651300|dbj|BAI17234.1| uroporphyrinogen-III synthase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654291|dbj|BAI20218.1| uroporphyrinogen-III synthase [Acetobacter pasteurianus IFO
3283-12]
Length = 242
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 89/242 (36%), Gaps = 19/242 (7%)
Query: 1 MY---IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M+ +++TRP T + G++P+ P Q+ AI +TS
Sbjct: 1 MHPRGVIVTRPEPGLSETMAAVADTGWLPLASPALVVQ---RHTLRLPQKLPAAILLTSG 57
Query: 58 ESLSTLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+++S + P++A+G+ +A AR GFT + ++ L ++
Sbjct: 58 QAVSAAVVAAQQAKALDIPVYAVGDRTAQRARDAGFTHVKSADGDARALVALLQTH--QQ 115
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAIL 171
L+ G + + + + Y ++ I + +Q +L
Sbjct: 116 PECGSLLLCSGAGQGVELAAWCRQAGFKVVRRVVYAAKPIQHINAQTCTAIQAAKVAVVL 175
Query: 172 FYARSSVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F++ S + + A+ A+ + +S +A + A+ + VA +++
Sbjct: 176 FFSAESAAGWLAALPEAEQKQLAAQASAVVISGRVAGVLRAAGWQNIRVADHVSAAAVMD 235
Query: 227 LL 228
L
Sbjct: 236 AL 237
>gi|325963978|ref|YP_004241884.1| uroporphyrinogen-III synthase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323470065|gb|ADX73750.1| uroporphyrinogen-III synthase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 299
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/266 (12%), Positives = 73/266 (27%), Gaps = 50/266 (18%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIAIT 55
+++TR +++ ++K G P+++PL F + ++ + +
Sbjct: 16 RVLVTRSPERSTALVAGLRKAGADPLVLPLIDFERATDQHSLDVACDALAAGAFDWLVAS 75
Query: 56 SSESLSTLPANF-----------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
S+ ++ L T I A+G A+ L + G D+ A
Sbjct: 76 SATTVHVLADKAAERGLTLARLVHPATRIAAVGAATRRLLQAHGLPVALVPADDQS-AAG 134
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL- 163
++ ++ + + L + + Y + D +
Sbjct: 135 LLSAWP---GGNGKVLLPQADIASPRLAEGLTAAGGRVTAVVAYCTVDYPAAAERRLAVP 191
Query: 164 --------------------------LQNADAILFYARSSVLYFFSLPLPAKISAAFLCL 197
DA++ + S+ L +F+ +
Sbjct: 192 LEDAAAGEAPPSYVLLTPDIAAAELAAGRIDAVIAASPSAARRIAELSP--LPRCSFVAI 249
Query: 198 SNNIASAIPASYKNVVTVACFPKETS 223
+ A A V A P
Sbjct: 250 GRSTAEQASALGIPVAATAAEPSPEG 275
>gi|88608065|ref|YP_506326.1| hypothetical protein NSE_0441 [Neorickettsia sennetsu str.
Miyayama]
gi|88600234|gb|ABD45702.1| hypothetical protein NSE_0441 [Neorickettsia sennetsu str.
Miyayama]
Length = 236
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 13/235 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I+ITRP++ A+ Q ++Q + ++ L V + + ++S ++
Sbjct: 2 ILITRPVEDAVYLQRRLQSLKIESLVEALFVVQPLWFDVATLVAAK---VVVSSKNAIRA 58
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
L + + + ++ F + +IYL
Sbjct: 59 LT-WSNASNDLQLYTMSDNIARFAVSSGFSNVFSCSCHTAEELEAYVLSYFGKDERIIYL 117
Query: 123 GGKPRNFHFEDYLIEHKIP-LRVIDCYYSQDIAYPETTMKNLLQNADAIL--FYARSSVL 179
G +E + CY + + L+ ++ + +
Sbjct: 118 SGAEITRDIVSTCLEKGFRWVERRICYMMCPLKEFSGNVCVALRRKRITCVTLFSVQAAV 177
Query: 180 YFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SL L IS ++ +S+ IAS + + V V+ P +L+ ++
Sbjct: 178 LCKSLFLKHGISPDFFSYFVMSSRIASIL---DCDTVYVSSVPTLDALVDVIERH 229
>gi|50555600|ref|XP_505208.1| YALI0F09449p [Yarrowia lipolytica]
gi|49651078|emb|CAG78015.1| YALI0F09449p [Yarrowia lipolytica]
Length = 243
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 60/242 (24%), Gaps = 17/242 (7%)
Query: 1 MYIVI----TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAI 52
M I++ T P +++ G+ V +PL ++ A+
Sbjct: 1 MNILLLKNPTTPRDFYQEL--FVEQKGHNAVFVPLLQHSPVGIESLKTHIANEVDGIDAV 58
Query: 53 AITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+TS ++ L AR + +V Q +
Sbjct: 59 IVTSHRAVEILGEYASPELLCKPAYTVGPATARCLRELGFKDVRGEETGNGAALVPQLLS 118
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN------LLQN 166
+ + GK R + L E L Y + D+ + ++
Sbjct: 119 DG-YQRFAFYAGKVRRDTIPNKLREAGRSLVEYTVYETVDLDDIAGRFEKAVGALPDAKH 177
Query: 167 ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + L + + + V A P L+
Sbjct: 178 NWICFFAPSGTAQIVEYLKKNPAHGFKIASIGPTTLDYLQKNDIKVDVTAKQPDPEHFLE 237
Query: 227 LL 228
+
Sbjct: 238 AM 239
>gi|254476670|ref|ZP_05090056.1| uroporphyrinogen-III synthase [Ruegeria sp. R11]
gi|214030913|gb|EEB71748.1| uroporphyrinogen-III synthase [Ruegeria sp. R11]
Length = 241
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 79/226 (34%), Gaps = 13/226 (5%)
Query: 3 IVITRPIKKALRTQEKI---QKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++TRP A R E++ + P+ PL + + +S+ +
Sbjct: 4 LLMTRPQMAARRFVEELDPATRAKVTPIFAPLIEPRPVAHDLGDPFCGD---VIFSSANA 60
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
++ P + +G + A Q G+T G+D +A +I P +PL
Sbjct: 61 VAFAPRPADPSQRAYCVGARTTSAAAQIGWTANCAGQDADGLVANLIER-----CPDRPL 115
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL-LQNADAILFYARSSV 178
++L G L + + Y + Y T + + Q+ + ++ +
Sbjct: 116 VHLRGIHSRGSIAQRLRDAGVSCTETVIYDQPALGYEADTERAMDAQDVMIVPLFSPRTA 175
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
F L P + L LS+ +A + + + P +
Sbjct: 176 AQFVKLA-PYRAELCLLALSDAVAEPLKRLNCKDLQICKAPTGEQM 220
>gi|239814382|ref|YP_002943292.1| uroporphyrinogen III synthase HEM4 [Variovorax paradoxus S110]
gi|239800959|gb|ACS18026.1| Uroporphyrinogen III synthase HEM4 [Variovorax paradoxus S110]
Length = 257
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 70/250 (28%), Gaps = 24/250 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
+++TRP ++A + ++ + G ++PL ++ L Y A+ S+
Sbjct: 6 VIVTRPAREAAQWADEFRAAGLDAEVLPLIAIEPAIDAEPLRAAWKRLADYAALMFVSAT 65
Query: 59 SLSTLPANFCRHT-----PIFAIGEASACLARQKGFTQI----FHGKDNSINLAKIIVEQ 109
++ + +A G +A + G Q + +
Sbjct: 66 AVEHFFLHAEEGQRATGPRFWATGPGTARALLRAGVPQDAIDAPPPDAARFDSEALWERV 125
Query: 110 KVLFTPQKPLIYLG------GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT---M 160
K ++ + + K + Y ++ +
Sbjct: 126 KGQVGQGVRVLIVRGGDAAGQPSGRDWLAREIDAAKGLRDTVVAYRRLPPSFDDAARALA 185
Query: 161 KNLLQNADAILFYARSSVLYFFSLPLPAKISAA-FLCLSNNIASAIPASYKNVVTVACFP 219
+ LF + ++ AA + I A A+ V V P
Sbjct: 186 LDGAAGRAVWLFSSSEAIANLCDAMPGTGWHAACAVATHARIGEAARAAGFGAVRVCP-P 244
Query: 220 KETSLLKLLP 229
+L+ +
Sbjct: 245 LREALVASIE 254
>gi|311272005|ref|XP_003133272.1| PREDICTED: uroporphyrinogen-III synthase [Sus scrofa]
Length = 237
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 74/257 (28%), Gaps = 46/257 (17%)
Query: 1 MYIVITR-PIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++ + P + R G P + L+ + YG + TS +
Sbjct: 1 MKVLLLKDPKEDDDR--------GQDPY-------------IRLSHPEGYGGLIFTSPRA 39
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSINLAKII 106
+ + + A + K + + +N N K+
Sbjct: 40 VEAVKLCLEKANKTEAWETSLKEKWNSKSVYVVGNATASLVSKIGLDPEGENCGNAEKLA 99
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ PL++ G + L + +P+ I Y + + + +
Sbjct: 100 EYICSRESSALPLLFPCGNLKRETLPRMLKDKGVPMESITVYQTIPHPGIQGNLNSYYSQ 159
Query: 167 ADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
F++ S S+ + L + F+ + A A+ A V A P
Sbjct: 160 QGIPASITFFSPSGLSYSLKHIQELSGDSIDQIKFVAIGPTTARALAAQGLPVSCTAESP 219
Query: 220 KETSLLK----LLPLRR 232
+L L R
Sbjct: 220 TPRALAAGIRTALQPHR 236
>gi|312130446|ref|YP_003997786.1| uroporphyrinogeN-iii synthase [Leadbetterella byssophila DSM 17132]
gi|311906992|gb|ADQ17433.1| uroporphyrinogen-III synthase [Leadbetterella byssophila DSM 17132]
Length = 257
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 67/241 (27%), Gaps = 19/241 (7%)
Query: 3 IVITR--PIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSS 57
I+IT P +K+ E +K F S+ AI TS
Sbjct: 14 ILITLDSPGEKSHTYSELAEKYDIKVDFRNFIEVRKVDHREFRKQKIDILSHTAIIFTSR 73
Query: 58 ESLSTLPANFCR-------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ I E +A ++ + + A + E
Sbjct: 74 HAIDHFFKLCEELRVEIPIDMKYLCITEQTANYLQKYITIRKRKIFSGNKTAADL--EPF 131
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+L + ++ RN D + +H + L Y + + D I
Sbjct: 132 ILKNKNEKFLFPCSNIRNNAIPDLMKKHGLSLTEAITYETVPADLSD----LTEVFYDII 187
Query: 171 LFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F++ S V K + A AI + A P S++ L
Sbjct: 188 CFFSPSGVHSLMHNFPDWKQNHTRLAAFGPTTAKAIRDLDLILDIEAPLPNAPSMVGALE 247
Query: 230 L 230
L
Sbjct: 248 L 248
>gi|296115107|ref|ZP_06833748.1| Uroporphyrinogen III synthase HEM4 [Gluconacetobacter hansenii ATCC
23769]
gi|295978208|gb|EFG84945.1| Uroporphyrinogen III synthase HEM4 [Gluconacetobacter hansenii ATCC
23769]
Length = 243
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 84/231 (36%), Gaps = 9/231 (3%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
++TRP T + G+ PV P+ + + A+ +TSS++++ +
Sbjct: 2 LVTRPPPGLAETIATLAARGWRPVAAPMLDIVTCP--LASYGASPPQAVVVTSSQAVAAI 59
Query: 64 PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLG 123
P +A+G A+A AR GF + + + ++ ++ L+
Sbjct: 60 ARPDLVGIPCYAVGAATARRARAAGFAHVRIAPEGTAQGLGRMLSAQI-MPSAGALLLAV 118
Query: 124 GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSVLYF 181
G+ L + +R Y + +L A A+LF++ + F
Sbjct: 119 GQGYAMDLARDLRDVGFRVRRRTVYRVTRRRQLDRPGHEMLMAGQAAAVLFFSPRTAQAF 178
Query: 182 FSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ PA+ + +S A + A+ V VA P +L L
Sbjct: 179 MAALTPAQRLALAHVRAIVISERTARVLDAALWRSVEVAPTPDSIGMLSRL 229
>gi|282165593|ref|YP_003357978.1| uroporphyrinogen-III synthase [Methanocella paludicola SANAE]
gi|282157907|dbj|BAI62995.1| uroporphyrinogen-III synthase [Methanocella paludicola SANAE]
Length = 261
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 59/256 (23%), Gaps = 32/256 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITS 56
+ +TRP K E ++ G V +P+ + + I +TS
Sbjct: 9 RVAVTRPAKFLPAAVEYLRSKGMEAVPVPMMEMVPRKNGDVDAFLERLSAGQVDVIILTS 68
Query: 57 SESLSTLPANFCRHT----------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
L + AIG + S
Sbjct: 69 QNGFLFLLERLGDDVEHFLGLVEGVRVLAIGPKTKKALEAHAIWAKMVPSTYSSEGI--- 125
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM---KNL 163
K P+K + L N L + Y + + L
Sbjct: 126 --VKEFSFPRKHVEVLRSDHGNPVLIKGLEAGGAIVHETILYDIVPLKGEAQEAFVREAL 183
Query: 164 LQNADAILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVVT 214
+ DA F + + F A + A + A + + V
Sbjct: 184 AGSIDAFTFTSTMTARSLFMTAESMGVLPELKSAMNAKAVAVIGTPTAEFLRENGVRVDV 243
Query: 215 VACFPKETSLLKLLPL 230
V ++ L
Sbjct: 244 VPRNFTFEEMIDDLAK 259
>gi|254181385|ref|ZP_04887982.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia pseudomallei 1655]
gi|184211923|gb|EDU08966.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia pseudomallei 1655]
Length = 659
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/259 (12%), Positives = 68/259 (26%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 11 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 70
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 71 VDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 130
Query: 106 IVEQKVLFTPQ-----KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E F + K ++ + G F + L E + ++ Y
Sbjct: 131 FAEIARAFDGEAKLAGKRVLIVRGDGGREWFAERLREAGAEVELVAAYRRVSPEPSIGAW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 191 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|134296606|ref|YP_001120341.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia vietnamiensis G4]
gi|134139763|gb|ABO55506.1| protein of unknown function DUF513, hemX [Burkholderia
vietnamiensis G4]
Length = 660
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 66/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSAALAAQLADAGCDVLEFPLIDIAPLDDPAPLVAAFATLADYALVIFVSPNA 70
Query: 60 LSTLPANFCRHTPI-----------------FAIGEASACLARQKGFTQIFHGKDNSINL 102
+ A++ P I + + + + +S +L
Sbjct: 71 IDRALAHYGAIWPNALPVGVVGPGSVAALARHGIAAPAHRVIAPQAGADGGVPRYDSESL 130
Query: 103 AKIIVEQK--VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----P 156
I K ++ + G + L E + ++ Y
Sbjct: 131 FACIEAAFGGAQALAGKRVLIVRGDGGREWLAERLREAGAEVTLVAAYRRVVPEPRVGAW 190
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPAS 208
E L A L + V L A A L I A
Sbjct: 191 ERVHALLAGAPHAWLVTSSEGVRNLHELARTHLNDAEIDALKHARLLAPHPRIEQTARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|170719444|ref|YP_001747132.1| uroporphyrinogen-III synthase [Pseudomonas putida W619]
gi|169757447|gb|ACA70763.1| Uroporphyrinogen-III synthase [Pseudomonas putida W619]
Length = 255
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 67/245 (27%), Gaps = 16/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSS 57
+++TRP + + + G +PL + LA A+ + S
Sbjct: 5 RLLLTRPEEDCAALAQTLATAGICSECLPLLAIEPVQLGARQRQQLAGLGQCQAMIVVSK 64
Query: 58 -----ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQK 110
+ + Q + + +S L + +
Sbjct: 65 PAARLLLAQLAHEGLQPPLAGWFTVGEATAAVLQSAGLTVTYPAQGDDSEALLTLPALRG 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNAD 168
+ P ++ + G + L E + ++ Y YP T+ + + +
Sbjct: 125 AMAGPAPRVLIVRGVGGRELLAERLAEQGASVDYLELYRRCLPVYPAGTLVRRIEAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ + + + L S +A A+ + T+LL
Sbjct: 185 GVVVSSGQGLEHLQQLAAADWPRVARLPLFVPSPRVAEQARAAGAQQIVDCRGASATALL 244
Query: 226 KLLPL 230
+
Sbjct: 245 AAVQR 249
>gi|254511687|ref|ZP_05123754.1| uroporphyrinogen-III synthase [Rhodobacteraceae bacterium KLH11]
gi|221535398|gb|EEE38386.1| uroporphyrinogen-III synthase [Rhodobacteraceae bacterium KLH11]
Length = 237
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 14/224 (6%)
Query: 6 TRPIKKALRTQEKIQKM---GYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
TRP + R ++ + PL V + +S+ ++
Sbjct: 2 TRPRAASDRFVAQLPARVRTAVKIIHSPLLEIRPLAVPVE---TGDVAGVIFSSANGVNA 58
Query: 63 LPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
R P + +G A+ A+ G+ G +A ++ + PQ PL++
Sbjct: 59 AALMDVDRDLPAYCVGPATTVAAKAAGWDAQMMGATAQELMAGLLSLR-----PQSPLLH 113
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSVLY 180
L G+ + + L + R Y + + I+ ++ +
Sbjct: 114 LRGEYSRGNVAEQLTSSGLTTREQVIYQQHLLPLSDAASLAAEGKQPVIVPLFSPRTARQ 173
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
F +S A + + +A P +
Sbjct: 174 FADGW-AGSAPLWLAAISETAAEPLKTLAFERLRIARAPNPDKM 216
>gi|329898165|ref|ZP_08272362.1| Uroporphyrinogen-III synthase [gamma proteobacterium IMCC3088]
gi|328920874|gb|EGG28311.1| Uroporphyrinogen-III synthase [gamma proteobacterium IMCC3088]
Length = 237
Score = 78.7 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 73/233 (31%), Gaps = 17/233 (7%)
Query: 6 TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPA 65
TRP +A E ++ G+ V +P+ V + S+ +++
Sbjct: 2 TRPAAQAGHLLELLEAEGFNGVSVPMLRIEFLER-VAPPDFSELDTLIFISTNAVAAFAQ 60
Query: 66 NFC-----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ IF IGE + G + L Q F+ + ++
Sbjct: 61 RVNAQAVPKSAKIFGIGEQTVRALNDIGVLADGANALTTEGL-----LQHTWFSEPRSVL 115
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ-DIAYPETTMKNLLQNADAILFY-ARSSV 178
+ G+ D L++ + + + Y A + M +LL ++ + + ++
Sbjct: 116 VVKGEGGRQTLRDTLVQRGSRVSLWEGYRRLGPEACHKAQMCDLLADSPIAVLTQSGETL 175
Query: 179 LYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S +A A+ + VA + ++ L
Sbjct: 176 ANVLDTVNGNSALLQGVPVIVPSQRVADTYSAAGLR-LVVARSALDKDMVAAL 227
>gi|86136716|ref|ZP_01055294.1| uroporphyrinogen-III synthase, putative [Roseobacter sp. MED193]
gi|85826040|gb|EAQ46237.1| uroporphyrinogen-III synthase, putative [Roseobacter sp. MED193]
Length = 254
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 71/226 (31%), Gaps = 14/226 (6%)
Query: 3 IVITRPIKKALRTQEKI---QKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++TRP++ + ++ + + PL V + + +SS
Sbjct: 18 LLMTRPLEASQGFVAQLPDELQAHLDVIYAPLMRIRALDVPVA---FDGHKGVVFSSSNG 74
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + + Q A ++ P PL
Sbjct: 75 VLAAGQAPNSLPAFCVGQRTTRAAEKAGWRAQCCGAT------AAELIAYLRDARPAAPL 128
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSV 178
++L G+ L +P Y Q + + M+ + I ++ +
Sbjct: 129 LHLHGRHTRGDIARNLAAAGLPCEGQTIYEQQLLPLTDEIMQKIRAQDRVITPLFSPRTA 188
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+F SL +++ + + LS +A + + + V+ P ++
Sbjct: 189 RHFASL-GLDQVNLSLIALSQAVAVELKGLHYKDLQVSKMPDARNM 233
>gi|197121773|ref|YP_002133724.1| uroporphyrinogen III synthase HEM4 [Anaeromyxobacter sp. K]
gi|196171622|gb|ACG72595.1| Uroporphyrinogen III synthase HEM4 [Anaeromyxobacter sp. K]
Length = 264
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/247 (9%), Positives = 59/247 (23%), Gaps = 18/247 (7%)
Query: 3 IVITRPI--KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
+V+TR + +++++G +P F + L + TS
Sbjct: 14 VVVTRGKGSEGKDALAARLEELGAEVRALPSIAFAPPADPAPLDAALRALDRFDWAVFTS 73
Query: 57 SESLSTLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ ++ A A + ++
Sbjct: 74 ANAVDRTVERLRALGLDPAALGRLRLAAVGPATAERLAAAVRAPDVVPVEAKGDVLARTL 133
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNA 167
+ +++ L+ L ++ Y + +
Sbjct: 134 GDQVRGRRVLFPRPAEGRPETVAGLLAAGAELTAVEAYRTVPAPAEALAHLAGWLAAGDV 193
Query: 168 DAILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
A+ F + S+V + + A A+ + V V L
Sbjct: 194 AAVAFASPSAVAAVLAALGDRSALLRGVLIAAIGPTTADALREAGLPVGAVPAHYTGRDL 253
Query: 225 LKLLPLR 231
+ + R
Sbjct: 254 AEAIAER 260
>gi|330684364|gb|EGG96094.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis VCU121]
Length = 216
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 55/204 (26%), Gaps = 9/204 (4%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLA 84
+ P + L +Y + +S ++
Sbjct: 13 TIIHKPFIDIKPLEFDLRLLK-DNYDWLIFSSKNAVKYFLPYLYLVNYKKIAVVGVKTAQ 71
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+ + +I E + I + + + +
Sbjct: 72 YCRELKIPVDLIPQDYSQEGLISEFQKYNQN----ILIPSSKQARPLLKETLARNNDVVK 127
Query: 145 IDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIA 202
ID Y +K+L+ N + + F + SSV Y+F+ K + + A
Sbjct: 128 IDLYEPVPHYQHINEVKSLIFNQEIDALTFSSSSSVRYYFNEDPIPKFD-HYFAIGKQTA 186
Query: 203 SAIPASYKNVVTVACFPKETSLLK 226
+ I + V VA +L+
Sbjct: 187 NTIHSYN-QPVIVADKQTLEALID 209
>gi|295115883|emb|CBL36730.1| Uroporphyrinogen-III synthase [butyrate-producing bacterium SM4/1]
Length = 322
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 70/221 (31%), Gaps = 35/221 (15%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
I++TRP +++ ++++ G V +P + ++ FL + TS
Sbjct: 100 KILVTRPKRRSAGMAGRLREAGAEVVELPAAEPRLLEDTSFLDRTLERLADFRWAVFTSP 159
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN-----LA 103
+ R IG +A + GF + ++ LA
Sbjct: 160 SGVELFFEYLRREKKDIRLLMGLKFAVIGAGTAKALCRYGFYADYMPENFYAKELGRGLA 219
Query: 104 KIIVEQKVLFTPQK-------------PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
+ I+ + + ++ L + + + L +IP Y +
Sbjct: 220 ETILHEMKEEEKRGENGRGGAGCGKPVKVLLLRAQKASPALCEELARAEIPFEDAVLYRT 279
Query: 151 QDIAYPET----TMKNLLQNADAILFYARSSVLYFFSLPLP 187
+ A + + D + F + S+V F L P
Sbjct: 280 EFPAPSMQAERVKILLEKKAFDYVTFTSESTVKGFLELLSP 320
Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 14/127 (11%), Positives = 32/127 (25%), Gaps = 8/127 (6%)
Query: 100 INLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE-- 157
+L++ + + ++ K R+ L E + + + +
Sbjct: 82 CSLSESLQWMEEKPLFGAKILVTRPKRRSAGMAGRLREAGAEVVELPAAEPRLLEDTSFL 141
Query: 158 TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAF------LCLSNNIASAIPASYKN 211
L + +F + S V FF K + A A+
Sbjct: 142 DRTLERLADFRWAVFTSPSGVELFFEYLRREKKDIRLLMGLKFAVIGAGTAKALCRYGFY 201
Query: 212 VVTVACF 218
+
Sbjct: 202 ADYMPEN 208
>gi|167042165|gb|ABZ06898.1| putative Uroporphyrinogen-III synthase HemD [uncultured marine
crenarchaeote HF4000_ANIW93H17]
Length = 273
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 70/262 (26%), Gaps = 37/262 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ-----SYGAIAITSS 57
I ITR + + I + + +P + E + SS
Sbjct: 11 IAITRSKDDSQEFIDLITREKGNVLPLPTIELVGKGEKIVDEFLSALAEGDPDYSVFMSS 70
Query: 58 ESLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+++S L + + A+G + ++ + + S
Sbjct: 71 KAVSLLFETAKKAGKFEELRLAVANTIVLAVGPRTKDALEKENVKVAYMPQRYSSVGIGE 130
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL-- 163
+ L K +I ++ L + + + + Y +
Sbjct: 131 V--FTKLNAVGKKVIIPRSGASTPFLKELLEKIGLDVTELYLYDVCAFRDTSQWNEFRQL 188
Query: 164 --LQNADAILFYARSSVLYFFSLPLPAK---------ISAAFLCLSNNIASAIPASYKNV 212
D I+F + SSV FF + + + A +
Sbjct: 189 FSQNKVDGIIFTSVSSVRAFFEIMQKDHDKNKLVDMLHETIVISIGPFTADELKKLNVEN 248
Query: 213 VTVACFPKE----TSLLKLLPL 230
V +A +++K L L
Sbjct: 249 V-IADVHTVSGSFDAIVKALSL 269
>gi|313676644|ref|YP_004054640.1| uroporphyrinogen-iii synthase [Marivirga tractuosa DSM 4126]
gi|312943342|gb|ADR22532.1| uroporphyrinogen-III synthase [Marivirga tractuosa DSM 4126]
Length = 259
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 50/210 (23%), Gaps = 17/210 (8%)
Query: 32 SYFIHDRESVF---LAMQQSYGAIAITSSESLSTLPAN-------FCRHTPIFAIGEASA 81
F + AI TS ++ F I E +A
Sbjct: 47 INVDPIDSKEFRKQKIDILKHTAIIFTSRNAVDHFFRICKDSKIEMPPEMKYFCISEQTA 106
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
++ + I+ + + ++ R ++ ++
Sbjct: 107 NYLQKYIVVRKRKVFVGERTAQDIL--NVIKKHKNEKYLFPCSNIRKDDIPSFMTKNGYN 164
Query: 142 LRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNN 200
Y + + D + F++ S + F K +
Sbjct: 165 FTEATIYKTVAADLSD----LEHITYDILAFFSPSGINSLFVNFPEFKQNKTRIAVFGPT 220
Query: 201 IASAIPASYKNVVTVACFPKETSLLKLLPL 230
A A + + A P S+ L L
Sbjct: 221 TAKAARDAGLIIDIEAPLPNAPSMTGALEL 250
>gi|53725179|ref|YP_102500.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia mallei ATCC 23344]
gi|67640111|ref|ZP_00438930.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia mallei GB8 horse 4]
gi|121600915|ref|YP_993592.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia mallei SAVP1]
gi|124385453|ref|YP_001028945.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia mallei NCTC 10229]
gi|126440099|ref|YP_001058122.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei 668]
gi|126449812|ref|YP_001081140.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia mallei NCTC 10247]
gi|134281236|ref|ZP_01767945.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia
pseudomallei 305]
gi|167003504|ref|ZP_02269290.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia mallei PRL-20]
gi|167901768|ref|ZP_02488973.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei NCTC
13177]
gi|226194481|ref|ZP_03790079.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia
pseudomallei Pakistan 9]
gi|237811341|ref|YP_002895792.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei MSHR346]
gi|254178329|ref|ZP_04884984.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia mallei ATCC 10399]
gi|254199405|ref|ZP_04905771.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia mallei
FMH]
gi|254205720|ref|ZP_04912072.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia mallei
JHU]
gi|254357878|ref|ZP_04974151.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia mallei
2002721280]
gi|52428602|gb|AAU49195.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX, putative [Burkholderia mallei ATCC 23344]
gi|121229725|gb|ABM52243.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia mallei SAVP1]
gi|124293473|gb|ABN02742.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia mallei NCTC 10229]
gi|126219592|gb|ABN83098.1| uroporphyrinogen-III synthetase [Burkholderia pseudomallei 668]
gi|126242682|gb|ABO05775.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia mallei NCTC 10247]
gi|134247542|gb|EBA47627.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia
pseudomallei 305]
gi|147749001|gb|EDK56075.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia mallei
FMH]
gi|147753163|gb|EDK60228.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia mallei
JHU]
gi|148027005|gb|EDK85026.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia mallei
2002721280]
gi|160699368|gb|EDP89338.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia mallei ATCC 10399]
gi|225933566|gb|EEH29555.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia
pseudomallei Pakistan 9]
gi|237505774|gb|ACQ98092.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei MSHR346]
gi|238520766|gb|EEP84223.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia mallei GB8 horse 4]
gi|243060978|gb|EES43164.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia mallei PRL-20]
Length = 659
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 67/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 11 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 70
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 71 VDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 130
Query: 106 IVEQKVLFTPQ-----KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E F + K ++ + G + L E + ++ Y
Sbjct: 131 FAEIARAFDGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 191 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|154508276|ref|ZP_02043918.1| hypothetical protein ACTODO_00772 [Actinomyces odontolyticus ATCC
17982]
gi|153797910|gb|EDN80330.1| hypothetical protein ACTODO_00772 [Actinomyces odontolyticus ATCC
17982]
Length = 278
Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 25/239 (10%), Positives = 63/239 (26%), Gaps = 14/239 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS------YGAIAIT 55
I++TR ++ G + +S L + + + +
Sbjct: 24 RILLTRAKSD-DAIARALRTAGAQVDAL-ALTVSTPLDSAQLNAARDRLADGGFAWVVFS 81
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLF 113
S + + + + + A + D + + A ++
Sbjct: 82 SWRAARAVVSGLPQARSLGTRIAAVGEATARWISDHAGVSADVTGAGSAAALLECFPAPA 141
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA----YPETTMKNLLQNADA 169
+ +P++ D L + +D Y + + + DA
Sbjct: 142 SGARPILIPRSAAAPDTLPDGLRALGWSVEAVDAYTTTHADAADIPDDIAGNFRAGHYDA 201
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ A S L + + + A+ V A P ++++ L
Sbjct: 202 AVLTASSQARALPPLLGLPPPTTRVVTIGAPTAATASRQGIAVAAQASSPTPDAIVRAL 260
>gi|254196285|ref|ZP_04902709.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia pseudomallei S13]
gi|169653028|gb|EDS85721.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia pseudomallei S13]
Length = 660
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 66/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 12 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 71
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ PA P A +A R + G + + +
Sbjct: 72 VDHAPARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 131
Query: 106 IVE-----QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E K ++ + G + L E + ++ Y
Sbjct: 132 FAEIARAFNGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAW 191
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 192 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 251
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 252 GFDRITLT-GAGDERIVRA 269
>gi|312622562|ref|YP_004024175.1| uroporphyrin-III C-methyltransferase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203029|gb|ADQ46356.1| uroporphyrin-III C-methyltransferase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 491
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 22/233 (9%), Positives = 64/233 (27%), Gaps = 14/233 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPV--MMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I ITRP + + + +G V + + Y + TS
Sbjct: 253 RICITRPKSVSRNIKSLLFSLGADVVDGCCSKLVLHREEIDKIINSLPEYNILVFTSVNG 312
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQ------KGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + + + + + + +I +
Sbjct: 313 VDSFFDYLIEKNIDVRNIKGDFAAIGKKTALSLQKRGFKVKYIPDEHSSDGLIKIFENEI 372
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
K ++ + K +F++ L + I Y + P + ++D +F
Sbjct: 373 DKSKKILTVQSKNAGDYFKNSLESLGFEVDTIFAYSMEFTKNPNDAV----YDSDIFVFT 428
Query: 174 ARSSVLYFFSLPLPAKISAAF-LCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ +F +S + + + + + + ++ + ++
Sbjct: 429 SSGMFRHFIECYGVEMLSNKIVISIGEHTQKTLESFGIKSI-ISNEVTDEGIV 480
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 33/115 (28%), Gaps = 5/115 (4%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K + K + + + L + C + N L + ++F + +
Sbjct: 252 KRICITRPKSVSRNIKSLLFSLGADVVDGCCSKLVLHREEIDKIINSLPEYNILVFTSVN 311
Query: 177 SVLYFFSLPLPAKISAA-----FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
V FF + I F + A ++ V + L+K
Sbjct: 312 GVDSFFDYLIEKNIDVRNIKGDFAAIGKKTALSLQKRGFKVKYIPDEHSSDGLIK 366
>gi|76811096|ref|YP_332642.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei 1710b]
gi|254260495|ref|ZP_04951549.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia pseudomallei 1710a]
gi|76580549|gb|ABA50024.1| uroporphyrin-III C-methyltransferase [Burkholderia pseudomallei
1710b]
gi|254219184|gb|EET08568.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia pseudomallei 1710a]
Length = 659
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 67/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 11 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 70
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 71 VDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 130
Query: 106 IVEQKVLFTPQ-----KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E F + K ++ + G + L E + ++ Y
Sbjct: 131 FAEIARAFDGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 191 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|254190784|ref|ZP_04897291.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia pseudomallei Pasteur 52237]
gi|157938459|gb|EDO94129.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia pseudomallei Pasteur 52237]
Length = 660
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 67/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 12 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 71
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 72 VDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 131
Query: 106 IVEQKVLFTPQ-----KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E F + K ++ + G + L E + ++ Y
Sbjct: 132 FAEIARAFDGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAW 191
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 192 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 251
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 252 GFDRITLT-GAGDERIVRA 269
>gi|311272001|ref|XP_003133271.1| PREDICTED: uroporphyrinogen-III synthase [Sus scrofa]
Length = 269
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 74/257 (28%), Gaps = 46/257 (17%)
Query: 1 MYIVITR-PIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++ + P + R G P + L+ + YG + TS +
Sbjct: 33 MKVLLLKDPKEDDDR--------GQDPY-------------IRLSHPEGYGGLIFTSPRA 71
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGK-------------DNSINLAKII 106
+ + + A + K + + +N N K+
Sbjct: 72 VEAVKLCLEKANKTEAWETSLKEKWNSKSVYVVGNATASLVSKIGLDPEGENCGNAEKLA 131
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ PL++ G + L + +P+ I Y + + + +
Sbjct: 132 EYICSRESSALPLLFPCGNLKRETLPRMLKDKGVPMESITVYQTIPHPGIQGNLNSYYSQ 191
Query: 167 ADAI---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
F++ S S+ + L + F+ + A A+ A V A P
Sbjct: 192 QGIPASITFFSPSGLSYSLKHIQELSGDSIDQIKFVAIGPTTARALAAQGLPVSCTAESP 251
Query: 220 KETSLLK----LLPLRR 232
+L L R
Sbjct: 252 TPRALAAGIRTALQPHR 268
>gi|85710450|ref|ZP_01041514.1| uroporphyrinogen-III synthase [Erythrobacter sp. NAP1]
gi|85687628|gb|EAQ27633.1| uroporphyrinogen-III synthase [Erythrobacter sp. NAP1]
Length = 225
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 74/230 (32%), Gaps = 20/230 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
++ RP T E +++G + PL + S+ AI I S+ ++
Sbjct: 5 VLAVRPEPGLAATMEAGKQLGLNMIGYPLFEVRARKWEC--PEPGSFDAILIGSANAIRH 62
Query: 63 LPANF--CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ P+ A+G+ +A AR GF G N+ + +
Sbjct: 63 GGDALSSITNKPVHAVGQTTADAARDAGFEIANVGTGGLQNVLDAVTKPTRFLRIAG--- 119
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ + Y S + ++ L Q +L ++ +
Sbjct: 120 --------EKHVPLTSSDGVEIVTRIAYESVPLEL-PEPLRALDQLGLTVLLHSAVAAER 170
Query: 181 FFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F S + L IA A + + V+ P +T+LL+L
Sbjct: 171 FDSETRRLALQRSRIKLAVLGPRIAEAAG-TGWQSIHVSPAPNDTALLEL 219
>gi|312137509|ref|YP_004004846.1| uroporphyrinogen iii synthase hem4 [Methanothermus fervidus DSM
2088]
gi|311225228|gb|ADP78084.1| Uroporphyrinogen III synthase HEM4 [Methanothermus fervidus DSM
2088]
Length = 262
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 69/251 (27%), Gaps = 29/251 (11%)
Query: 1 MY---IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAI 54
M I +TRP +A + I+K G +++P + + +
Sbjct: 3 MKNKIIAVTRPKDRAQEAVDIIEKHGGKALVVPTLELKKLCTESLMKICKIADKLDWVIF 62
Query: 55 TSSESLSTLPAN-------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ L ++ I IG + +KG + +I
Sbjct: 63 TSPFAVDALLECCPQFPKKLNKNAKIAVIGPKTKKTVIEKGLKVDVEPPEY--VTESLIE 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----PETTMKNL 163
K K + K L E + V + Y S + K +
Sbjct: 121 TLKNYDMKDKNVAIPRTKAARKTLIKSLEEMGANVYVAEAYKSTLPKDVSKIKKLINKII 180
Query: 164 LQNADAILFYARSSVLYFFSLPLP---------AKISAAFLCLSNNIASAIPASYKNVVT 214
DAI F + +V F + + + A+ + +
Sbjct: 181 NNEIDAITFTSPLTVKNLFKVAGNKKDEVIKVLSSKKVLAAAIGPITANTLFEYAIVPI- 239
Query: 215 VACFPKETSLL 225
+ ++
Sbjct: 240 IPHKYTVREMI 250
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 20/74 (27%), Gaps = 4/74 (5%)
Query: 160 MKNLLQNADAILFYARSSVLYFFS----LPLPAKISAAFLCLSNNIASAIPASYKNVVTV 215
+ + D ++F + +V P +A + + V
Sbjct: 50 ICKIADKLDWVIFTSPFAVDALLECCPQFPKKLNKNAKIAVIGPKTKKTVIEKGLKVDVE 109
Query: 216 ACFPKETSLLKLLP 229
SL++ L
Sbjct: 110 PPEYVTESLIETLK 123
>gi|70733285|ref|YP_263059.1| uroporphyrinogen-III synthase [Pseudomonas fluorescens Pf-5]
gi|68347584|gb|AAY95190.1| uroporphyrinogen-III synthase [Pseudomonas fluorescens Pf-5]
Length = 255
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 68/229 (29%), Gaps = 16/229 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITS- 56
+++TRP + + + + +PL S L Y A+ + S
Sbjct: 5 RLLLTRPAEDCAALAAILAQSEILSSSLPLLEIQALPVSDSQRATLLAFDQYCAVIVVSK 64
Query: 57 --SESLSTLPANFCRHTPIFAIGEASACLAR----QKGFTQIFHGKDNSINLAKIIVEQK 110
+ L + P A A A+ D+S L ++ ++
Sbjct: 65 PAAHLGLELLRQYWPQPPDQAWFTVGAATAQILADAGLPVAYPQQGDDSEALLELPQLRE 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNAD 168
+ P ++ + G+ + L + ++ Y Y E + + + +
Sbjct: 125 AIRRPDPRVLIVRGEGGRELLSERLRALGASVDYLELYRRCLPHYAEGALLQRIEVERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVT 214
++ + + L PA S +A A+ V
Sbjct: 185 GLVVSSGQGFSHLRQLAGPAWPQLAKMPLFVPSPRVADMAHAAGAEKVV 233
>gi|126453804|ref|YP_001065358.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei 1106a]
gi|217420259|ref|ZP_03451765.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia
pseudomallei 576]
gi|242315098|ref|ZP_04814114.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia
pseudomallei 1106b]
gi|126227446|gb|ABN90986.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia
pseudomallei 1106a]
gi|217397563|gb|EEC37579.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia
pseudomallei 576]
gi|242138337|gb|EES24739.1| putative uroporphyrinogen-III synthase HemD/putative
uroporphyrinogen III methylase HemX [Burkholderia
pseudomallei 1106b]
Length = 659
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 65/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 11 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 70
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 71 VDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 130
Query: 106 IVE-----QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E K ++ + G + L E + ++ Y
Sbjct: 131 FAEIARAFNGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 191 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|84514842|ref|ZP_01002205.1| hypothetical protein SKA53_11498 [Loktanella vestfoldensis SKA53]
gi|84511001|gb|EAQ07455.1| hypothetical protein SKA53_11498 [Loktanella vestfoldensis SKA53]
Length = 238
Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 15/236 (6%)
Query: 3 IVITRPIKKALRTQEKIQKM--G-YIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++TRP +A +I G ++ PL + +V L + + +TS+
Sbjct: 5 LILTRPAPQAEAFAAEITARWVGPLRTILSPLLQIVPVPITVDLTQVK---GVILTSAHG 61
Query: 60 LSTLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
++ A R P + +GE +A LA + GF I D A + ++ + P P
Sbjct: 62 VAASRAATLPRGLPAWCVGEKTAQLASEAGFDVIAGPGD-----ATRLADKIISRRPDGP 116
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSS 177
L++L G + L I + Y + + L A IL ++ +
Sbjct: 117 LVHLHGVHTRGGVSERLAAAGIGCIDVIGYDQVAQPLSDAAFEALQGGAPVILPLFSPRT 176
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL-LPLRR 232
P + +S + +A A ++VA P +++ L R
Sbjct: 177 ATILAGQA-PFAAPVHVVVMSTAVQNAAAAINLRSLSVAATPDAGAMIAATLKRLR 231
>gi|239918006|ref|YP_002957564.1| uroporphyrinogen-III synthase [Micrococcus luteus NCTC 2665]
gi|239839213|gb|ACS31010.1| uroporphyrinogen-III synthase [Micrococcus luteus NCTC 2665]
Length = 278
Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 67/276 (24%), Gaps = 50/276 (18%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPV-------MMPLSYFIHDRESVFLAMQ------- 46
M +++TR +A + + G +PL+ F + L
Sbjct: 1 MRVLLTRQPAQAGDLEAGL--AGAEVAGRRLRVGFLPLTDFALPDDDGPLRALLADWAGA 58
Query: 47 ----------QSYGAIAITSSESLSTLPANFCRHT-----PIFAIGEASACLARQKGFTQ 91
+ +TS+ ++ L A I A G +A + + G
Sbjct: 59 DGDAAGPVRSDGSRWLVLTSANTVRALRAVGWDGHVPAGARIAATGPGTARVLTEAGCDA 118
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ +I L L +R Y +
Sbjct: 119 APWLPPEDRSAEGLIAGLAALHPRGARAWLPQSDRARPRLAHGLRAAGWDVRTGLAYRTV 178
Query: 152 DIAYPE-----------------TTMKNLLQNADAILFYARSSVLYFFS--LPLPAKISA 192
+ + A++ + S+V F + L A
Sbjct: 179 PYPAQAGRRLLDGADEGRGDVVTPARLSAVAAGTAVVLTSSSAVEEFVAAGLAPLAGERV 238
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + ++ A P +L +L
Sbjct: 239 RLVAIGAPTRDTCARRGLPLLGTAPTPDAAGVLAVL 274
>gi|145352552|ref|XP_001420605.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580840|gb|ABO98898.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 249
Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/240 (15%), Positives = 73/240 (30%), Gaps = 19/240 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIAITSSES 59
+V TR K + G V +PL + ++ +S+ + +TS E+
Sbjct: 1 VVCTRERGKNGALMNLLAARGARCVELPLVEAVPGEDAATFPDVLKRESWDWVCVTSPEA 60
Query: 60 LSTLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ R + +G + + + T K + + A L
Sbjct: 61 AKVFLEAYERAGRPSGVRVAVVGAGTGKVLAKAEPTTFAMDKQFTPSKATAATMAAELPC 120
Query: 115 PQKP-LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
Q ++Y K +D L + ++ Y ++ + AD + F
Sbjct: 121 DQGSLILYPASKKAATTLQDGLEARGATVVRLNTYSTERVERLSPEDVAAAVRADVVTFG 180
Query: 174 ARSSVLYFFSLPLPAK----------ISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ S+V + L A + A++C+ A A V P
Sbjct: 181 SPSAVRAWVELCGDALYERLTADARALQPAYVCIGETSAEACANCELPDVFYPELPGIEG 240
>gi|254298289|ref|ZP_04965741.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia pseudomallei 406e]
gi|157808241|gb|EDO85411.1| putative uroporphyrinogen-III synthase HemD/uroporphyrinogen III
methylase HemX [Burkholderia pseudomallei 406e]
Length = 660
Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 65/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 12 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 71
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 72 VDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 131
Query: 106 IVE-----QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E K ++ + G + L E + ++ Y
Sbjct: 132 FAEIARAFNGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAW 191
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 192 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 251
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 252 GFDRITLT-GAGDERIVRA 269
>gi|53718658|ref|YP_107644.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei K96243]
gi|52209072|emb|CAH35012.1| putative bifunctional protein (uroporphyrin-III C-methyltransferase
and uroporphyrinogen-III synthase transmembrane protein)
[Burkholderia pseudomallei K96243]
Length = 660
Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 65/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 12 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 71
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 72 VDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 131
Query: 106 IVE-----QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E K ++ + G + L E + ++ Y
Sbjct: 132 FAEIARAFNGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAW 191
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 192 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 251
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 252 GFDRITLT-GAGDERIVRA 269
>gi|315122375|ref|YP_004062864.1| uroporphyrinogen-III synthase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495777|gb|ADR52376.1| uroporphyrinogen-III synthase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 209
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 124/191 (64%), Positives = 156/191 (81%)
Query: 29 MPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKG 88
MPLSYF +DRE+V LA+Q+SYG IAITSSESLSTLP FC ++ +F+IGEASA LAR KG
Sbjct: 2 MPLSYFTYDREAVSLALQESYGGIAITSSESLSTLPDKFCHNSILFSIGEASASLARTKG 61
Query: 89 FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCY 148
F+QIF GK+NSI+LA++IV++K LFTPQKPLIYLGGK R HFE+YL +H+IP + IDCY
Sbjct: 62 FSQIFCGKNNSISLAQLIVQKKELFTPQKPLIYLGGKKRKIHFENYLFQHRIPFKTIDCY 121
Query: 149 YSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
YS +I Y + ++ ++++ADA+LFYA SSV FF LPLP KIS FLCLS NIAS IP S
Sbjct: 122 YSWNIVYSKKEVERIIKSADAVLFYASSSVSNFFLLPLPIKISVRFLCLSQNIASEIPVS 181
Query: 209 YKNVVTVACFP 219
+ ++V+VA FP
Sbjct: 182 FTDLVSVAEFP 192
>gi|110636594|ref|YP_676801.1| uroporphyrinogen-III synthase [Cytophaga hutchinsonii ATCC 33406]
gi|110279275|gb|ABG57461.1| uroporphyrinogen-III synthase [Cytophaga hutchinsonii ATCC 33406]
Length = 265
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/243 (12%), Positives = 63/243 (25%), Gaps = 25/243 (10%)
Query: 3 IVITRPIKKALR-----TQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAI 54
I++++P + EK +P F ++ A+
Sbjct: 22 ILVSQPKPTDEKSPYYVLAEK---YNLKIDFIPFIQIEQVDLKEFKKQKIEILAHTAVIF 78
Query: 55 TSSESLSTLPANFCR-------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ F I E +A ++ + + +
Sbjct: 79 TSRNAIDNFFRICTEAKIEVPAEMKYFCITEQTANYLQKYIVIRKRKIFVGKKTASDL-- 136
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
E+ + + +Y R +L ++ Y + N
Sbjct: 137 EEVIKKHKTEKFLYPCSDIRKDDIPMFLSQNGFTFSEAVFYKTVASDLS----HLADVNY 192
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D I F++ S + F + A A+ + + A P S+
Sbjct: 193 DIITFFSPSGISSLFVNFPDFEQKATRIAAFGPTTAKAVHDAGLILDVEAPLPNAPSMTG 252
Query: 227 LLP 229
L
Sbjct: 253 ALE 255
>gi|327401282|ref|YP_004342121.1| Uroporphyrinogen-III synthase [Archaeoglobus veneficus SNP6]
gi|327316790|gb|AEA47406.1| Uroporphyrinogen-III synthase [Archaeoglobus veneficus SNP6]
Length = 261
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 63/243 (25%), Gaps = 18/243 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ + RP + T + +QK G+ V P + E V + + ITS +
Sbjct: 16 RVAVFRPKEHIEETAKVLQKEGFEVVAAPFLKTVVSEEGVEKLKKAEFEVAIITSQTAAK 75
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
N IVE+ K +
Sbjct: 76 IAAKNIPLQGKRVIAIGKKTASVLSNAGVNSEMPSKFDSKS---IVEEFAEKLRGKKVAI 132
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA---DAILFYARSSV 178
L +++ + I Y ++ E DA +F +R V
Sbjct: 133 LRSD--KGDPVLLNLKNYAEVEEIVLYRIEEEHGKEQLEVLEKVARGELDAAIFSSRMMV 190
Query: 179 LYFFSLPLPAKI---------SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F L A + + + A A+ + ++KLL
Sbjct: 191 HSFMKLADKAGMLKDVIGGLSKMHVIAIGPPTARALKEYDITP-LMPEEYTFEGVMKLLR 249
Query: 230 LRR 232
R
Sbjct: 250 SLR 252
>gi|282920210|ref|ZP_06327935.1| uroporphyrinogen-III synthase [Staphylococcus aureus A9765]
gi|282594558|gb|EFB99543.1| uroporphyrinogen-III synthase [Staphylococcus aureus A9765]
Length = 222
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 61/209 (29%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QRYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + + ++ + L + + I
Sbjct: 79 CESLGIRVDFMPNDFSQEGFLK---SFNQTNQKILLPSSELARPLLLAALSKAN-EVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I + + VT+A SL++ + R
Sbjct: 194 TIKSY-QQPVTIAEIQTLESLIEKILESR 221
>gi|258511804|ref|YP_003185238.1| Uroporphyrinogen III synthase HEM4 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478530|gb|ACV58849.1| Uroporphyrinogen III synthase HEM4 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 247
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 74/237 (31%), Gaps = 12/237 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESL 60
+++T+ + + G+ +PL + E+V + A TS+ ++
Sbjct: 6 VIVTQSGDRGAALAAALCDRGFRAEHLPLIETVPLAEAVSQLAEVAAGDDAWVFTSAAAV 65
Query: 61 STLPANFCRHTPIFAIGEASA---CLARQKGFTQIFHGKDNSINLAKIIVEQ-KVLFTPQ 116
L ++ + A A A R+ + A+ E+ + P
Sbjct: 66 RALASHAPAVARLQAAPAAFALGSATWRELRAVAPHAVHFPGVRGAQEFAERLVEVCPPS 125
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
I+ G+ + L + Y + + ++ + ++ ++ S
Sbjct: 126 LGFIFPCGRLALEVLPEELRRAGRRVTEWTVYDTVLRTEAADRLAE--RSGEIVVLFSPS 183
Query: 177 SVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+V + P ++ +L A A+ + P +L+ L
Sbjct: 184 AVSAIAAHPSSGRMFAPGRFTWLPFGGTTARALDHLGIQHLEPPAEPSHEALIHHLE 240
>gi|124268185|ref|YP_001022189.1| uroporphyrinogen-III synthase [Methylibium petroleiphilum PM1]
gi|124260960|gb|ABM95954.1| uroporphyrinogen-III synthase [Methylibium petroleiphilum PM1]
Length = 275
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/264 (9%), Positives = 60/264 (22%), Gaps = 33/264 (12%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY----GAIAITS 56
M +++TRP ++A ++ + G +PL + + + + S
Sbjct: 1 MRVLVTRPEEQAREWVARLTERGVAAAALPLIAIEAPADPAPVRLAWQTLPQRSLLVFVS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEAS----------ACLARQKGFTQIFHGKDNSINLAKII 106
+++ + A G + +
Sbjct: 61 PNAVTQFFSQRPAGCEWQATLRFGSPGPGTSAALRAAGVAPGAIVEPPPDAGRFDSEALW 120
Query: 107 VEQKVLFTPQKP--------LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
Q + L + + ++ Y
Sbjct: 121 AVLGPQGPWQGRSVLIVRGSVDGEAQGQGREWLSQVLRDAGASIDLVAAYRRAPPRLDAA 180
Query: 159 TMKNLLQNA-----DAILFYARSSVLYF-----FSLPLPAKISAAFLCLSNNIASAIPAS 208
LF + ++ + P +A L IA +
Sbjct: 181 GQALWAAALAAPVEHVWLFSSSEAIDQLDALAAAAGTAPDWRTAQALATHPRIAQRARRA 240
Query: 209 YKNVVTVACFPKETSLLKLLPLRR 232
V A P +++ + + R
Sbjct: 241 GFGRVIEAP-PTLEAVVAAIGVSR 263
>gi|221065750|ref|ZP_03541855.1| uroporphyrinogen III synthase HEM4 [Comamonas testosteroni KF-1]
gi|220710773|gb|EED66141.1| uroporphyrinogen III synthase HEM4 [Comamonas testosteroni KF-1]
Length = 277
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/273 (10%), Positives = 66/273 (24%), Gaps = 46/273 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----------LAMQQSYGA 51
+++TRP+ A + + G ++PL + Y A
Sbjct: 3 RVLVTRPLHDAKPWVDAFRARGLQAEVLPLLAIAGCTDPAAHQALLSARQLALKPGHYRA 62
Query: 52 IAITSSESLSTLPANFCRHTP-----------IFAIGEASACLARQKGFTQIFH----GK 96
+ S + A+ TP + G + + G +
Sbjct: 63 VMFVSGNAAQYFFASNTPQTPTGKSLLAPDTRAWTPGPGTERALLELGLSFRQIDGPSPD 122
Query: 97 DNSINLAKIIVEQKVLFTPQKPLIYLG----------------GKPRNFHFEDYLIEHKI 140
+ ++ + L E
Sbjct: 123 AAQFESEALWQNVHDQIRAGDRVLIVRGASPATGNAGRPAPSTQGAGRDWLAARLREAGA 182
Query: 141 PLRVIDCYYSQDIAYPETTM---KNLLQNADAILFYARSSVLYFFSLPLPAKISA-AFLC 196
+ ++ Y Q ++ + + + LF + +V L K L
Sbjct: 183 EVELLAVYERQLPSWTAQQLDVARQAASDGSLWLFSSSEAVANLQQLLPQQKWHLGLALT 242
Query: 197 LSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
IAS ++ V + P ++ +
Sbjct: 243 THERIASKALSAGFGRVLHS-RPSLDDVVASIE 274
>gi|292654253|ref|YP_003534150.1| uroporphyrinogen-III synthase [Haloferax volcanii DS2]
gi|291370951|gb|ADE03178.1| uroporphyrinogen-III synthase [Haloferax volcanii DS2]
Length = 247
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 64/233 (27%), Gaps = 21/233 (9%)
Query: 5 ITRPIKK-ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
+ RP R E + +G PV P+ + + + +TS + L
Sbjct: 9 VFRPDDDRIERAVELLDSLGATPVPDPMLAIEPTGAT-----PEPGAFVVLTSKTGVELL 63
Query: 64 PANFCRHTP--IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
+ IG A+A AR G+T + + +V+ +
Sbjct: 64 DEAGWNPGDAVLCCIGPATADAARDAGWTVDRVPDEYTS---AGLVDHLAPDVDGATVEV 120
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK-NLLQNADAILFYARSSVLY 180
+ D L + + Y + + + +A LF + +V +
Sbjct: 121 ARSDHGSAVLTDGLRDAGADVHETVLYRLVRPEGAGESAELAAAGDLEAALFTSSLTVEH 180
Query: 181 FFSLPLPAKISAAFLC---------LSNNIASAIPASYKNVVTVACFPKETSL 224
F I + + + +V V +L
Sbjct: 181 FLDAAAERGIREEAIAGLNDAVVGAIGPPTRDTAESHGIDVTVVPDEATFEAL 233
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 17/60 (28%), Gaps = 1/60 (1%)
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
++ +++ V A C+ A A + V V L+ L
Sbjct: 52 VVLTSKTGVE-LLDEAGWNPGDAVLCCIGPATADAARDAGWTVDRVPDEYTSAGLVDHLA 110
>gi|294787828|ref|ZP_06753072.1| uroporphyrinogen-III synthase [Simonsiella muelleri ATCC 29453]
gi|294484121|gb|EFG31804.1| uroporphyrinogen-III synthase [Simonsiella muelleri ATCC 29453]
Length = 241
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/235 (11%), Positives = 68/235 (28%), Gaps = 14/235 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSESL 60
I++ RP + ++ G+ + P + E + A+ S ++
Sbjct: 7 ILLIRPANRLPEDVATCRQFGWQYIPFPPLNIVPHHERIDHLPERIEESDAVFWVSPTAV 66
Query: 61 STLPANFCRH-TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
N P A+G +++ R+ G +++ + + A + + +
Sbjct: 67 EVAGLNLSGSLKPHIAVGYSTSKALREFGAAWVWYPSTGNDSEAVLELPIWEKLPIGGEI 126
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + G + L++ + + Y+ ++ K + V
Sbjct: 127 LIVNGTGGRNYLAQQLVQRGYHVSNMKIYHREEQVLDWLAFKEHRPYFAW--VTSAQMVN 184
Query: 180 YFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
F + + IA A+ + + L + L
Sbjct: 185 IVFKQAPISLTQTLKSLIYFTHHQRIADALRQHGVGQIRIVKN-----LTEALQK 234
>gi|261856742|ref|YP_003264025.1| uroporphyrinogen III synthase HEM4 [Halothiobacillus neapolitanus
c2]
gi|261837211|gb|ACX96978.1| Uroporphyrinogen III synthase HEM4 [Halothiobacillus neapolitanus
c2]
Length = 256
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/242 (9%), Positives = 59/242 (24%), Gaps = 18/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKM--GYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITS 56
I +TRP + I + + PL F E +A + S
Sbjct: 9 IGLTRPDGANDELAKAISSLLPDATLLNWPLLTFAPIPERQKALSAMARITAGDWAIFVS 68
Query: 57 SESLSTLPANFCRHTPIFAIGE-----ASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
++ +A + H ++ + ++ +
Sbjct: 69 PRAVRFAHDLHDLTALPGLHWAAVGDTTTAAIQSLFSDPPQVHRPSSTQDSEGLLASLPI 128
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ G+ D L ++ I + + Y ++ + L
Sbjct: 129 EAMRGHTVWLFRGQTGRETLADTLRQNGITVIPVPVY-RRNCTRRPAHLSALPSTWVITA 187
Query: 172 FYARSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTV-ACFPKETSLL 225
+ + + + ++ + + V A P + +L
Sbjct: 188 PESLRCLRQLADTLESAEDRARLLHCNLVVINARTEARARSLGFTGAIVRAEAPDDAALA 247
Query: 226 KL 227
+
Sbjct: 248 RA 249
>gi|56461659|ref|YP_156940.1| uroporphyrinogen-III synthase [Idiomarina loihiensis L2TR]
gi|56180669|gb|AAV83391.1| Uroporphyrinogen-III synthase [Idiomarina loihiensis L2TR]
Length = 251
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/235 (11%), Positives = 67/235 (28%), Gaps = 9/235 (3%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR---ESVFLAMQQSYGAIAITSSES 59
+++ RP K ++++K G + E + Q+ + I I S +
Sbjct: 9 VLLLRPGKSPDDFTQQLRKTGRECFVHSFIEIEPLPVNKEQLTQIKQKHWDGIVIVSKNA 68
Query: 60 LSTLPANFCRHTPIFAI-GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
P K ++ ++ Q+
Sbjct: 69 AHYASRAGFSGVPSKYYAVGPGTASFACKHLNTAVSCPAFIHQSEGLLELSELQKLQQQN 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY-PETTMKNLLQNADAILFYARSS 177
+ + G+ D + + + Y + + ++ + + I+ +
Sbjct: 129 WLIIRGEGGRELLADAIRARGASVDYWEVYRRKQLTLNDPELIQQWISSVGTIVVTSAEQ 188
Query: 178 VLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ YF S S ++ S+ + IP + + V + L+ L
Sbjct: 189 LGYFLSSMPNSAQSWLDSCQWIVPSHRLKGLIPFGQSDNIKVTGSAADAILMNAL 243
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 37/118 (31%), Gaps = 1/118 (0%)
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
K ++ L F L + V + + + + + Q +
Sbjct: 6 HKAVLLLRPGKSPDDFTQQLRKTGRECFVHSFIEIEPLPVNKEQLTQIKQKHWDGIVIVS 65
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTV-ACFPKETSLLKLLPLRR 232
+ ++ S + + + + + AS V+ A + LL+L L++
Sbjct: 66 KNAAHYASRAGFSGVPSKYYAVGPGTASFACKHLNTAVSCPAFIHQSEGLLELSELQK 123
>gi|307595123|ref|YP_003901440.1| Uroporphyrinogen III synthase HEM4 [Vulcanisaeta distributa DSM
14429]
gi|307550324|gb|ADN50389.1| Uroporphyrinogen III synthase HEM4 [Vulcanisaeta distributa DSM
14429]
Length = 234
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/227 (11%), Positives = 64/227 (28%), Gaps = 7/227 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
++I R K I G + +P+ + + +++ + I S+ +
Sbjct: 3 RVLILRASGK----IRPIHLNGADIIQVPVIDVVPNEDAIDRVSLNGVNYVIIMSTTVVK 58
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
+ + + + + + + II + P+ ++
Sbjct: 59 YVSEKLRQLSNDVKVIGVGPQTCSEVEKLNVTCIMPREFSSYGII--DMMRDLPRGKVVV 116
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
L N + + L + + Y + L+ D ++F + +
Sbjct: 117 LRSLRGNDYIINELKKLNYDVIEYRLYDVRPNPAGVEIACRLINYVDYVVFMSSMTYEAV 176
Query: 182 FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
A + + + S I N +L+LL
Sbjct: 177 RDCARDALRGKSVIAIGKVTESRIRDDGVNP-LTPSEYTLNGILRLL 222
>gi|220916567|ref|YP_002491871.1| Uroporphyrinogen III synthase HEM4 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954421|gb|ACL64805.1| Uroporphyrinogen III synthase HEM4 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 264
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/247 (9%), Positives = 56/247 (22%), Gaps = 18/247 (7%)
Query: 3 IVITRPI--KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITS 56
+V+TR + +++ +G +P F + L + TS
Sbjct: 14 VVVTRGKGSEGKDALAARLEALGAEVRALPSIAFAPPADPAPLDAALRALDRFDWAVFTS 73
Query: 57 SESLSTLPANFCRHTPIFAIGEASA------CLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ ++ A A + ++
Sbjct: 74 ANAVDRTVERLRALGLDPAALGRLRLAAVGPATAERLAAAVRAPDVVPVEAKGDVLARTL 133
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNA 167
+ +++ L+ L ++ Y +
Sbjct: 134 GDHIRGRRVLFPRPAEGRPETVAGLLAAGAELTAVEAYRTVPAPAEALAHLAGWLAAGEV 193
Query: 168 DAILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
A+ F + S+V + + A + + V V L
Sbjct: 194 AAVAFASPSAVAAVLAALGDRSALLRGVLIAAIGPTTADTLREAGLPVGAVPAHYTGRDL 253
Query: 225 LKLLPLR 231
+ + R
Sbjct: 254 AEAIAER 260
>gi|82751258|ref|YP_416999.1| uroporphyrinogen III synthase [Staphylococcus aureus RF122]
gi|282916929|ref|ZP_06324687.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
D139]
gi|82656789|emb|CAI81218.1| uroporphyrinogen III synthase [Staphylococcus aureus RF122]
gi|282319416|gb|EFB49768.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
D139]
gi|298694940|gb|ADI98162.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
ED133]
Length = 222
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 61/209 (29%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QRYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + + ++ + L + + I
Sbjct: 79 CESLGIQVDFMPNDFSQEGFLK---SFNQTNQKILLPSSELARPLLSAALSKDN-EVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I + + VT+A SL++ + R
Sbjct: 194 TIKSY-QQPVTIAEIQTLESLIEKILESR 221
>gi|167918039|ref|ZP_02505130.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei BCC215]
Length = 536
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 67/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 11 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 70
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 71 VDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 130
Query: 106 IVEQKVLFTPQ-----KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E F + K ++ + G + L E + ++ Y
Sbjct: 131 FAEIARAFDGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 191 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|307293496|ref|ZP_07573340.1| Uroporphyrinogen III synthase HEM4 [Sphingobium chlorophenolicum
L-1]
gi|306879647|gb|EFN10864.1| Uroporphyrinogen III synthase HEM4 [Sphingobium chlorophenolicum
L-1]
Length = 222
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 82/235 (34%), Gaps = 20/235 (8%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +VI RP A +T E+ ++G ++PL + A+ +TS+ +
Sbjct: 1 MRPLVILRPEPGAGKTAERAAELGLKARIIPLFVPRAVEWDA--PAPDRFDALLLTSANA 58
Query: 60 LSTLPANF--CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
R P +A+G A+A ++ GF Q+ G + +A+ I
Sbjct: 59 ARLAGERLADYRTLPAYAVGRATANAMQEAGFAQVIAGDGDGTAIARRIAA-----DGHG 113
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+++L G+ L + I Y + L+ +L ++ +
Sbjct: 114 HVLHLAGRTVAPVDGGAL-----RIDRIVVYEMLRTRDD--RLAERLEPDSVLLVHSPRA 166
Query: 178 VLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
L P + S + +S A A S P + +L L LR
Sbjct: 167 GEVLAQLVGPRQRASLHLIAISPA-ALAACGSGWASAQTPDKPDDERML-ALALR 219
>gi|149912847|ref|ZP_01901381.1| hypothetical protein RAZWK3B_02625 [Roseobacter sp. AzwK-3b]
gi|149813253|gb|EDM73079.1| hypothetical protein RAZWK3B_02625 [Roseobacter sp. AzwK-3b]
Length = 243
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/230 (15%), Positives = 70/230 (30%), Gaps = 12/230 (5%)
Query: 3 IVITRPIKKALRTQEKIQKM-GY--IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+ITRP + ++ G V+ P+ H + L Y + TS
Sbjct: 5 ILITRPDPSGAAFADHVRARIGCAPEIVLSPIMRIEHFGD---LPDISRYKTLIFTSRHG 61
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A A Q + A ++ + + +P P
Sbjct: 62 VEAYLAQDGPCDIPAYAVGN----ATAAAARQAGMDVISCDGDAGDLIARILADSPTAPC 117
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSV 178
++L G+ + L Y + + L I+ ++ S
Sbjct: 118 LHLRGEHIASNIAQALTLGGTETHEATIYRQIEGQLTAQALSLLQNGQPVIVPLFSPRSA 177
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
FF A +S+N+ A+P + A P ++L+++
Sbjct: 178 QLFFEQTAAAGP-ILVAAISDNVRHAVPNGAAQRIDTAEKPTAEAMLEVI 226
>gi|253732320|ref|ZP_04866485.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253723958|gb|EES92687.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|329733221|gb|EGG69558.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
21193]
Length = 222
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 58/209 (27%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QHYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + I L + + I
Sbjct: 79 CESLGIRVDFMPNDFSQEGFLKSFNQTNQK----ILLPSSELARPLLLAALSKDNEVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I + + VT+A SL++ + R
Sbjct: 194 TIKSY-QQPVTIAEIQTLESLIEKILESR 221
>gi|149199273|ref|ZP_01876311.1| uroporphyrinogen-III synthetase [Lentisphaera araneosa HTCC2155]
gi|149137698|gb|EDM26113.1| uroporphyrinogen-III synthetase [Lentisphaera araneosa HTCC2155]
Length = 229
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 79/235 (33%), Gaps = 16/235 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++T + + ++ + PL S+ L + TS +
Sbjct: 1 MRVLLTGFRDTNSKARAILESYSAEVIDFPLQEMQLIPGSIKL--LGKSDWVIFTSPTAA 58
Query: 61 STLPANFC---RHTPIFAIGEASACLARQKGFTQI---FHGKDNSINLAKIIVEQKVLFT 114
+ +G ++A ++ +LAKIIVE K F
Sbjct: 59 RLYMQHLYPLNHFDKAACVGPSTAEALEGDYGRACSLLPETNFSASSLAKIIVENKKQFV 118
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
K +++ K + L E+ I ++ D Y PE + N DAI F++
Sbjct: 119 D-KKILFPCSKLAKNDLVNLLAENGISIQRHDFY------LPERNQIASIPNFDAICFFS 171
Query: 175 RSSVLYFFSLPLPAKISAAFLC-LSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S+V +FSL ++ + + + A +A K+L
Sbjct: 172 SSAVEAYFSLKNSKDLAGKKVSLIGESTAVTFRQYSDLPFVLAKEANAEETAKVL 226
>gi|221233010|ref|YP_002515446.1| uroporphyrinogen-III synthase [Caulobacter crescentus NA1000]
gi|220962182|gb|ACL93538.1| uroporphyrinogen-III synthase [Caulobacter crescentus NA1000]
Length = 228
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 12/229 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+ ITR A T +++ +G+ PV+ PL S+ A+A TS+ +
Sbjct: 7 VWITRAQPGAAATAQRVAALGFRPVVDPLLAIEP---SLAKIDLSGIAALAFTSANGVEG 63
Query: 63 LPANFCRHT-PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
R P+F +G A+A A+ GF F + + L ++I+ P+++
Sbjct: 64 FARCNARRDLPVFTVGAATAKAAKDAGFAHAFSAEGDVEALERLII-----DARPGPVLW 118
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
G + L + R + Y + + A T+ LL ++L ++ +
Sbjct: 119 AGAQAPAGDLVAALRAQGLEARGVAVYATVERAPSPATL-ALLDAPLSVLVHSPRAARAL 177
Query: 182 FS-LPLPAKISAAFLCLSNNIASAIPASYKNV-VTVACFPKETSLLKLL 228
L LCLS +A+ + + V A P E++LL+LL
Sbjct: 178 GRILAGRDHGDLRLLCLSPAVAAPLDKIAEPRFVASAPRPDESALLQLL 226
>gi|237801593|ref|ZP_04590054.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331024453|gb|EGI04509.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 258
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/216 (9%), Positives = 63/216 (29%), Gaps = 16/216 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + ++G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESAALATVLAEVGIFSSSLPLLETEPLPLTPAQRSIIFDLLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P + A+ + G + + + L + ++
Sbjct: 65 PAARLAIEMIDEVWPQPPMQPWFSVGSATGQILIDYGLDASWPAQGDDSEALLGLPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NAD 168
+ P ++ + G + L E + + + Y Y + ++ +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLREQGVGVDYLPLYRRYLPQYAPEALAQRVRVERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNI 201
++ + + L + S +
Sbjct: 185 GLVVSSGQGFEHLLQLAGDSWPDLAGLPLFVPSPRV 220
>gi|21283342|ref|NP_646430.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
MW2]
gi|49486496|ref|YP_043717.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650541|ref|YP_186554.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
COL]
gi|87160955|ref|YP_494311.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195474|ref|YP_500278.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|151221775|ref|YP_001332597.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161509888|ref|YP_001575547.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142580|ref|ZP_03567073.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|258451816|ref|ZP_05699838.1| uroporphyrinogen-III synthase [Staphylococcus aureus A5948]
gi|262048645|ref|ZP_06021528.1| uroporphyrinogen III synthase [Staphylococcus aureus D30]
gi|262052243|ref|ZP_06024448.1| uroporphyrinogen III synthase [Staphylococcus aureus 930918-3]
gi|284024718|ref|ZP_06379116.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
132]
gi|294848691|ref|ZP_06789437.1| uroporphyrinogen-III synthase [Staphylococcus aureus A9754]
gi|297207617|ref|ZP_06924052.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300911699|ref|ZP_07129143.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380739|ref|ZP_07363408.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|2589182|gb|AAC45834.1| uroporphyrinogen III synthase [Staphylococcus aureus]
gi|21204782|dbj|BAB95478.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
MW2]
gi|49244939|emb|CAG43400.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284727|gb|AAW36821.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
COL]
gi|87126929|gb|ABD21443.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203032|gb|ABD30842.1| uroporphyrinogen-III synthase, putative [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|150374575|dbj|BAF67835.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160368697|gb|ABX29668.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257860528|gb|EEV83354.1| uroporphyrinogen-III synthase [Staphylococcus aureus A5948]
gi|259159844|gb|EEW44883.1| uroporphyrinogen III synthase [Staphylococcus aureus 930918-3]
gi|259163292|gb|EEW47851.1| uroporphyrinogen III synthase [Staphylococcus aureus D30]
gi|269941150|emb|CBI49537.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
TW20]
gi|294824717|gb|EFG41140.1| uroporphyrinogen-III synthase [Staphylococcus aureus A9754]
gi|296887634|gb|EFH26532.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300887120|gb|EFK82321.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
TCH70]
gi|302333335|gb|ADL23528.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302751496|gb|ADL65673.1| Uroporphyrinogen III synthase HEM4 [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340738|gb|EFM06669.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|315198636|gb|EFU28964.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140452|gb|EFW32306.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143990|gb|EFW35759.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329314343|gb|AEB88756.1| Uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
T0131]
gi|329728436|gb|EGG64873.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
21189]
Length = 222
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 58/209 (27%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QRYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + I L + + I
Sbjct: 79 CESLGIRVDFMPNDFSQEGFLKSFNQTNQK----ILLPSSELARPLLLAALSKDNEVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I + + VT+A SL++ + R
Sbjct: 194 TIKSY-QQPVTIAEIQTLESLIEKILESR 221
>gi|281424611|ref|ZP_06255524.1| uroporphyrinogen-III synthase [Prevotella oris F0302]
gi|281401282|gb|EFB32113.1| uroporphyrinogen-III synthase [Prevotella oris F0302]
Length = 248
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 64/244 (26%), Gaps = 22/244 (9%)
Query: 2 YIVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIA 53
I+I++P + ++ G V P F + A+
Sbjct: 4 KILISQPQPASDKSPYYDLA---KEHGIEMVFRPFFKVEGISSKEFRQQKVSLLDHTAVV 60
Query: 54 ITSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
TS ++ F + E A ++ + + +
Sbjct: 61 FTSRHAIDNFFTLAKELRVTIPEDMKYFCLIETIALYIQKYVQYRKRKVFFGTTGKIDGL 120
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ Q + + + N + L + Y + + E K+ +
Sbjct: 121 LPQMLKHKG-EKFLVPLSSVHNDDIKGMLDSKGLKHSECVMYRTVSNDFSEDEKKSF--D 177
Query: 167 ADAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F++ + V K A + A + +A + S+
Sbjct: 178 YDMLVFFSPTGVKALKKNFPDFKQGDIKIAAFGPATAKEVEAQGMRIDLMAPSQEHPSMT 237
Query: 226 KLLP 229
L
Sbjct: 238 AALK 241
>gi|283470937|emb|CAQ50148.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
ST398]
Length = 222
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 61/209 (29%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QRYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + + ++ + L + + I
Sbjct: 79 CESLGIRVDFMPNDFSQEGFLK---SFNQTNQKILLPSSELARPLLSAALSKDN-EVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I + + VT+A SL++ + R
Sbjct: 194 TIKSY-QQPVTIAEIQTLESLIEKILESR 221
>gi|260950309|ref|XP_002619451.1| hypothetical protein CLUG_00610 [Clavispora lusitaniae ATCC 42720]
gi|238847023|gb|EEQ36487.1| hypothetical protein CLUG_00610 [Clavispora lusitaniae ATCC 42720]
Length = 262
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 63/233 (27%), Gaps = 27/233 (11%)
Query: 19 IQKMGYIPVMMPLSYFIHDRESVFLAMQQ------SYGAIAITSSESLSTLPANFC---- 68
G+ PV +PL + ITS ++
Sbjct: 28 FSSSGHKPVFVPLLNHAPIDIDQTAEYLASETFLTETDSFIITSQRAVEVFHECLSVIGS 87
Query: 69 ----RHTPIFAIGEASACLARQKGFTQIFHGKD-------NSINLAKIIVEQKVLFTPQK 117
+ I A + A ++ N LA II+E K
Sbjct: 88 RDPAKVEQIIAKTGYTVGPATEEILRAKGFSDVRGGSLAGNGSKLADIILE--EKRGCPK 145
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQNADAILFYARS 176
+++ G R L + + L + Y ++ A + + + D ++F++
Sbjct: 146 KIVFFTGVIRKDIIPVKLKQEGVDLEEVVIYKTEPKAGILDNFVSCCEEKVDWLVFFSPQ 205
Query: 177 SVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
KIS + + +A P +LL+
Sbjct: 206 GTEEIVEHIQKGKISLDGVRIASIGPTTLEYLNGKGIESHAMAPKPTAAALLE 258
>gi|124485186|ref|YP_001029802.1| uroporphyrinogen-III synthase [Methanocorpusculum labreanum Z]
gi|124362727|gb|ABN06535.1| uroporphyrinogen-III synthase [Methanocorpusculum labreanum Z]
Length = 250
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 70/235 (29%), Gaps = 20/235 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIP-VMMPL---SYFIHDRESVFLAMQQSYGAIAITS 56
M I ITR +K + Q +K G+ ++ PL + V A + AI TS
Sbjct: 21 MQIAITRLAEKGTKDQALCEKYGHSARIVSPLQAELNASLVQTFVLAANDGEFDAIFFTS 80
Query: 57 SESLST----LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ L + + AIG +A + ++G S + +
Sbjct: 81 AYPAKHIGLLLNREITKRCRVIAIGPQTAKILHEQGVAAETLPTFYSRDFVPYLGNWIEG 140
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
K + N + + CY L+ D +LF
Sbjct: 141 ----KRIGIPRADVPNPELIRAIEDAGGLAFEYRCYGLVPTGEFLD-----LEGVDVVLF 191
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ +S F LP + A + + V E +L+ L
Sbjct: 192 TSANS---FSQARLPDLTRIIPAAIGEITAERMKEGGVTPIVVGDGSLEGTLIAL 243
>gi|299142117|ref|ZP_07035251.1| uroporphyrinogen-III synthase [Prevotella oris C735]
gi|298576579|gb|EFI48451.1| uroporphyrinogen-III synthase [Prevotella oris C735]
Length = 259
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 64/244 (26%), Gaps = 22/244 (9%)
Query: 2 YIVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIA 53
I+I++P + ++ G V P F + A+
Sbjct: 4 KILISQPQPASDKSPYYDLA---KEHGIEMVFRPFFKVEGISSKEFRQQKVSLLDHTAVV 60
Query: 54 ITSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
TS ++ F + E A ++ + + +
Sbjct: 61 FTSRHAIDNFFTLAKELRVTIPEDMKYFCLIETIALYIQKYVQYRKRKVFFGTTGKIDGL 120
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ Q + + + N + L + Y + + E K+ +
Sbjct: 121 LPQMLKHKG-EKFLVPLSSVHNDDIKSMLDSKGLKHSECVMYRTVSNDFSEAEKKSF--D 177
Query: 167 ADAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F++ + V K A + A + +A + S+
Sbjct: 178 YDMLVFFSPTGVKALKKNFPDFKQGDIKIAAFGPATAKEVEAQGMRIDLMAPSQEHPSMT 237
Query: 226 KLLP 229
L
Sbjct: 238 AALK 241
>gi|284166933|ref|YP_003405212.1| uroporphyrinogen III synthase HEM4 [Haloterrigena turkmenica DSM
5511]
gi|284016588|gb|ADB62539.1| Uroporphyrinogen III synthase HEM4 [Haloterrigena turkmenica DSM
5511]
Length = 255
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 64/235 (27%), Gaps = 20/235 (8%)
Query: 3 IVITRPI-KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ + RP ++ + ++G PV P+ + + + TS
Sbjct: 15 VAVFRPDDERLESAAALLSELGAEPVPDPMLAVEATGAT----PRTDADYVVFTSKTGAE 70
Query: 62 TLPANFCRH--TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + AIG A+A R +G+ + + + +V +
Sbjct: 71 LVSEAGWEPGDQTVCAIGPATADALRAEGYAVDLVPEKFTSSG---LVAALEDRVAGARI 127
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP-ETTMKNLLQNADAILFYARSSV 178
+ D + + Y ++ + DA+ F + +V
Sbjct: 128 EVARSDHGSAVLLDGFEDAGAYVHETILYRLVRPDGSGKSAALAAEGDLDAVCFTSSLTV 187
Query: 179 LYFFSLPLPAKISAAFL---------CLSNNIASAIPASYKNVVTVACFPKETSL 224
+F + A L + A +V V +L
Sbjct: 188 DHFLEAAADRGVRDAALEGLAAATVGVIGEPTAETAAERGIDVDVVPKEATFDAL 242
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F +++ S + A A+ A V V + L+ L
Sbjct: 60 YVVFTSKTGAE-LVSEAGWEPGDQTVCAIGPATADALRAEGYAVDLVPEKFTSSGLVAAL 118
Query: 229 PLR 231
R
Sbjct: 119 EDR 121
>gi|49483912|ref|YP_041136.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425785|ref|ZP_05602209.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428451|ref|ZP_05604849.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431085|ref|ZP_05607462.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433768|ref|ZP_05610126.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436684|ref|ZP_05612728.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
M876]
gi|282906066|ref|ZP_06313921.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908981|ref|ZP_06316799.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911297|ref|ZP_06319099.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914466|ref|ZP_06322252.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
M899]
gi|282919435|ref|ZP_06327170.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
C427]
gi|282924812|ref|ZP_06332478.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
C101]
gi|283958421|ref|ZP_06375872.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503544|ref|ZP_06667391.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510559|ref|ZP_06669264.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
M809]
gi|293537101|ref|ZP_06671781.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
M1015]
gi|295428241|ref|ZP_06820870.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590796|ref|ZP_06949434.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
MN8]
gi|49242041|emb|CAG40740.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271479|gb|EEV03625.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275292|gb|EEV06779.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278033|gb|EEV08681.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281861|gb|EEV11998.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284035|gb|EEV14158.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
M876]
gi|282313178|gb|EFB43574.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
C101]
gi|282317245|gb|EFB47619.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
C427]
gi|282321647|gb|EFB51972.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
M899]
gi|282324992|gb|EFB55302.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327245|gb|EFB57540.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331358|gb|EFB60872.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|283790570|gb|EFC29387.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919946|gb|EFD97014.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
M1015]
gi|291095210|gb|EFE25475.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466450|gb|EFF08971.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
M809]
gi|295127641|gb|EFG57278.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575682|gb|EFH94398.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
MN8]
gi|312437872|gb|ADQ76943.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
TCH60]
gi|315195572|gb|EFU25959.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 222
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 61/209 (29%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QRYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + + ++ + L E + I
Sbjct: 79 CESLGIRVDFMPNDFSQEGFLE---SFNQTNQKILLPSSELARPLLSAALSEDN-EVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I + + VT+A SL++ + R
Sbjct: 194 TIKSY-QQPVTIAEIQTLESLIEKILESR 221
>gi|253734546|ref|ZP_04868711.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|253727487|gb|EES96216.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
TCH130]
Length = 222
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 61/209 (29%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QHYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + + ++ + L + + I
Sbjct: 79 CESLGIRVDFMPNDFSQEGFLK---SFNQTNQKILLPLSELARPLLLAALSKDN-EVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I + + VT+A SL++ + R
Sbjct: 194 TIKSY-QQPVTIAEIQTLESLIEKILESR 221
>gi|323440786|gb|EGA98495.1| uroporphyrinogen III synthase [Staphylococcus aureus O11]
gi|323442941|gb|EGB00564.1| uroporphyrinogen III synthase [Staphylococcus aureus O46]
Length = 222
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 60/209 (28%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QRYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + + ++ + + + I
Sbjct: 79 CESLGIQVDFMPNDFSQEGFLK---SFNQTNQKILLPSSELARP-LLSAALSRDNEVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I + + VT+A SL++ + R
Sbjct: 194 TIKSY-QQPVTIAEIQTLESLIEKILESR 221
>gi|167910009|ref|ZP_02497100.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei 112]
Length = 491
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 67/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 11 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 70
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 71 VDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 130
Query: 106 IVEQKVLFTPQ-----KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E F + K ++ + G + L E + ++ Y
Sbjct: 131 FAEIARAFNGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 191 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|160897674|ref|YP_001563256.1| uroporphyrinogen III synthase HEM4 [Delftia acidovorans SPH-1]
gi|160363258|gb|ABX34871.1| Uroporphyrinogen III synthase HEM4 [Delftia acidovorans SPH-1]
Length = 269
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/265 (12%), Positives = 62/265 (23%), Gaps = 39/265 (14%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----------FLAMQQSYGA 51
I++TRP A + +Q G + L R++ L Y A
Sbjct: 4 RILVTRPAHDAAAWVDALQARGLPAQPLALMAIGPCRDAATQQALQAARNALREGPGYRA 63
Query: 52 IAITSSESLSTLP----ANFCRHTPIFAIGEASA-------------------CLARQKG 88
+ S ++ A T + G +A +
Sbjct: 64 VMFVSGNAVQHFFGTDPARLPASTRAWTPGPGTAQALLALGIAPAQIDGPPPDAAQFESE 123
Query: 89 FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCY 148
+IV + + L E + ++ Y
Sbjct: 124 TLWQRVHDQIHAGDRVLIVRGDSQAGAPRTVPA-TAGAGRDWLAARLREAGAQVEMLAVY 182
Query: 149 YSQDIAYPETT---MKNLLQNADAILFYARSSVLYFFSLPL-PAKISAAFLCLSNNIASA 204
+ A+ + + L + SV L + A L IA+
Sbjct: 183 QRELPAWDAAQTALARQAADDGSLWLLSSAESVANLQQLLPGQSWQKARALATHERIAAQ 242
Query: 205 IPASYKNVVTVACFPKETSLLKLLP 229
V P ++ +
Sbjct: 243 ARQLGFGYVKQC-RPALEDVVASIE 266
>gi|320584033|gb|EFW98245.1| Uroporphyrinogen III synthase [Pichia angusta DL-1]
Length = 261
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 77/236 (32%), Gaps = 24/236 (10%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRESV------FLAMQQSYGAIAITSSESLSTLPANFCR- 69
E + Y PV +PL E Y A+ +TS + TL
Sbjct: 19 ELFSQNQYEPVFLPLLRHSSINEKEVKEFLKSDLYLNEYQALIVTSQRCIETLAKLLQEL 78
Query: 70 ------------HTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTP 115
+ P + +G ++ GFT I GKD N L+ II+ + +
Sbjct: 79 RHEKFERLDQILNKPSYTVGPTTSQYLENLGFTDIRGGKDAGNGSILSDIIIGDPLFRSS 138
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE---TTMKNLLQNADAILF 172
K +++L G+ R L + + Y ++ + + + + ++F
Sbjct: 139 AKKVLFLTGEIRKDIIPRKLKSIDFNVLELVSYRTEPLEDIQSRYEQLSQTAPDKSWLIF 198
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ ++ K + + + + V+ P SLL +
Sbjct: 199 FSPQGTADIVNILKEKKHNFQIASIGPTTEEYLLDNGIKPAVVSSKPDAKSLLSSI 254
>gi|312891233|ref|ZP_07750753.1| uroporphyrinogen-III synthase [Mucilaginibacter paludis DSM 18603]
gi|311296281|gb|EFQ73430.1| uroporphyrinogen-III synthase [Mucilaginibacter paludis DSM 18603]
Length = 252
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 61/239 (25%), Gaps = 17/239 (7%)
Query: 3 IVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAITSS 57
I++T P + E +K + + A+ TS
Sbjct: 11 ILVTLPKPDTDKNPYAELAKKNNLKIDFRSFIHVEGVTAKEFRKERINLAEFTAVIFTSR 70
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
S + + L QK A + E +
Sbjct: 71 NSADHFFRICEEMRFEVPADMKYFCLSETIALYLQKYIQYRKRKIFFGKQTAADLAEV-L 129
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ +Y + +L+++ + + + + ++ + I+
Sbjct: 130 KKHSAEKFLYPCSDVAAEETQKFLLDNGYKFTPAVLFRTVCSDLSD--LADVFYD--IIV 185
Query: 172 FYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F++ SS+ F K + A + + VA P S+ +
Sbjct: 186 FFSPSSIQSLFKNFPDFKQNNTRIAAFGATTHKAALDAGLIIDIVAPTPAAPSMTMAIE 244
>gi|256821393|ref|YP_003145356.1| Uroporphyrinogen III synthase HEM4 [Kangiella koreensis DSM 16069]
gi|256794932|gb|ACV25588.1| Uroporphyrinogen III synthase HEM4 [Kangiella koreensis DSM 16069]
Length = 250
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 75/240 (31%), Gaps = 18/240 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITSSES 59
I++TRP +++ GY + PL F + + L + + + S ++
Sbjct: 7 IIVTRPSPMGESLCQELNDEGYRAIHCPLIRFTSNTDYSPEQQLTLLKQHKLWIFVSKQA 66
Query: 60 LSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ + + + A+G+A+ + G + + +S + +I + +
Sbjct: 67 VDYALKDLSQEQLDQFLGHTLIAVGKATQKALQPYGLSALVPKTPDSEGILALINQFSL- 125
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA--YPETTMKNLLQNADAI 170
P I L + + + L V+ Y+ ++ P + +
Sbjct: 126 --PADYPILLIRGDKGRGLLEQELGGPYQLGVLPVYHRIELTAALPPAMQQASAEKPIGW 183
Query: 171 LFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + + + A I + S+ I+ A ++
Sbjct: 184 VVTSGQILELTDKMLSTAGITPEQVVIISGSSRISDLARQMGYTNCYTAKDASNAEIISA 243
>gi|258424086|ref|ZP_05686968.1| uroporphyrinogen-III synthase [Staphylococcus aureus A9635]
gi|257845707|gb|EEV69739.1| uroporphyrinogen-III synthase [Staphylococcus aureus A9635]
Length = 222
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 61/209 (29%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QRYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + + ++ + L + + I
Sbjct: 79 CESLGIRVDFMPNDFSQEGFLK---SFNQTNQKILLPSSELARPLLSASLSKDN-EVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I + + VT+A SL++ + R
Sbjct: 194 TIKSY-QQPVTIAEIQTLESLIEKILESR 221
>gi|167823215|ref|ZP_02454686.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei 9]
Length = 546
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 67/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 31 VLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 90
Query: 60 LSTLPANFCRHTPIF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A P A +A R + G + + +
Sbjct: 91 VDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESL 150
Query: 106 IVEQKVLFTPQ-----KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E F + K ++ + G + L E + ++ Y
Sbjct: 151 FAEIARAFDGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAW 210
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ + I A
Sbjct: 211 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARAL 270
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 271 GFDRITLT-GAGDERIVRA 288
>gi|189460193|ref|ZP_03008978.1| hypothetical protein BACCOP_00830 [Bacteroides coprocola DSM 17136]
gi|189433054|gb|EDV02039.1| hypothetical protein BACCOP_00830 [Bacteroides coprocola DSM 17136]
Length = 248
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/239 (9%), Positives = 62/239 (25%), Gaps = 16/239 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPTSEKSPYFDIAEKYGVKIDFRPFIKVESLSAKEFRQQKVSILDHTAVVFTS 64
Query: 57 SESLSTLPANFCRHTPI------FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + + L QK +
Sbjct: 65 RHAIDHFFSLCSEMRITIPETMKYFCTSETIALYIQKYVQYRKRKVFFGATGKFADLLPL 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++ + N ++ L ++KI Y + + + D +
Sbjct: 125 IVKHNTEKYFIPMSDVHNDEVKNLLDKNKIQHTEAIMYRTVSNDFTPEE----KFDYDML 180
Query: 171 LFYARSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+F++ + + + + A A+ + + A S+ L
Sbjct: 181 IFFSPAGIQSLMKNFPDFEQKDIAIGSFGPTTAQAVKDAGLRLDLEAPTAAAPSMTAAL 239
>gi|15924659|ref|NP_372193.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927248|ref|NP_374781.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
N315]
gi|148268150|ref|YP_001247093.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
JH9]
gi|150394217|ref|YP_001316892.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
JH1]
gi|156979987|ref|YP_001442246.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
Mu3]
gi|253317187|ref|ZP_04840400.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|255006454|ref|ZP_05145055.2| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257794055|ref|ZP_05643034.1| uroporphyrinogen-III synthase [Staphylococcus aureus A9781]
gi|258415759|ref|ZP_05682030.1| uroporphyrinogen III synthase HEM4 [Staphylococcus aureus A9763]
gi|258422004|ref|ZP_05684924.1| uroporphyrinogen-III synthase [Staphylococcus aureus A9719]
gi|258438238|ref|ZP_05689522.1| uroporphyrinogen III synthase [Staphylococcus aureus A9299]
gi|258443696|ref|ZP_05692035.1| uroporphyrinogen-III synthase [Staphylococcus aureus A8115]
gi|258444934|ref|ZP_05693254.1| uroporphyrinogen-III synthase [Staphylococcus aureus A6300]
gi|258447988|ref|ZP_05696120.1| uroporphyrinogen-III synthase [Staphylococcus aureus A6224]
gi|258454304|ref|ZP_05702273.1| uroporphyrinogen-III synthase [Staphylococcus aureus A5937]
gi|269203287|ref|YP_003282556.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
ED98]
gi|282893165|ref|ZP_06301399.1| uroporphyrinogen-III synthase [Staphylococcus aureus A8117]
gi|282929343|ref|ZP_06336910.1| uroporphyrinogen-III synthase [Staphylococcus aureus A10102]
gi|295405980|ref|ZP_06815788.1| uroporphyrinogen-III synthase [Staphylococcus aureus A8819]
gi|296274903|ref|ZP_06857410.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
MR1]
gi|297245094|ref|ZP_06928971.1| uroporphyrinogen-III synthase [Staphylococcus aureus A8796]
gi|13701466|dbj|BAB42760.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
N315]
gi|14247441|dbj|BAB57831.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
Mu50]
gi|147741219|gb|ABQ49517.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
JH9]
gi|149946669|gb|ABR52605.1| Uroporphyrinogen III synthase HEM4 [Staphylococcus aureus subsp.
aureus JH1]
gi|156722122|dbj|BAF78539.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
Mu3]
gi|257788027|gb|EEV26367.1| uroporphyrinogen-III synthase [Staphylococcus aureus A9781]
gi|257839352|gb|EEV63825.1| uroporphyrinogen III synthase HEM4 [Staphylococcus aureus A9763]
gi|257842048|gb|EEV66477.1| uroporphyrinogen-III synthase [Staphylococcus aureus A9719]
gi|257848282|gb|EEV72273.1| uroporphyrinogen III synthase [Staphylococcus aureus A9299]
gi|257851102|gb|EEV75045.1| uroporphyrinogen-III synthase [Staphylococcus aureus A8115]
gi|257856142|gb|EEV79057.1| uroporphyrinogen-III synthase [Staphylococcus aureus A6300]
gi|257858749|gb|EEV81620.1| uroporphyrinogen-III synthase [Staphylococcus aureus A6224]
gi|257863534|gb|EEV86293.1| uroporphyrinogen-III synthase [Staphylococcus aureus A5937]
gi|262075577|gb|ACY11550.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
ED98]
gi|282589075|gb|EFB94176.1| uroporphyrinogen-III synthase [Staphylococcus aureus A10102]
gi|282764483|gb|EFC04609.1| uroporphyrinogen-III synthase [Staphylococcus aureus A8117]
gi|285817353|gb|ADC37840.1| Uroporphyrinogen-III synthase [Staphylococcus aureus 04-02981]
gi|294968977|gb|EFG44998.1| uroporphyrinogen-III synthase [Staphylococcus aureus A8819]
gi|297178174|gb|EFH37422.1| uroporphyrinogen-III synthase [Staphylococcus aureus A8796]
gi|312830048|emb|CBX34890.1| uroporphyrinogen-III synthase HemD family protein [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|315130699|gb|EFT86685.1| uroporphyrinogen III synthase [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727524|gb|EGG63980.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
21172]
Length = 222
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 57/209 (27%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QRYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + I L + + I
Sbjct: 79 CESLGIRVDFMPNDFSQEGFLKSFNQTNQK----ILLPSSELARPLLLAALSKDNEVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I + VT+A SL++ + R
Sbjct: 194 TIKTY-QQPVTIAEIQTLESLIEKILESR 221
>gi|156842099|ref|XP_001644419.1| hypothetical protein Kpol_1064p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115061|gb|EDO16561.1| hypothetical protein Kpol_1064p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 255
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 22/233 (9%)
Query: 18 KIQKMGYIPVMMPLSYFIHDRESVF-----LAMQQSYGAIAITSSESLSTLPANFCRHTP 72
++ Y PV +PL H + F L + I ITS ++ L +
Sbjct: 21 LFKQHQYDPVFLPLIKHQHIPDEAFQVLNSLEYLVNLKYIIITSQRTVECLMETILPNLC 80
Query: 73 -----------IFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTP---Q 116
++ +G A+A + GF I G N LA +++++ + Q
Sbjct: 81 DDHKRLLLSKTVYTVGPATAGFLERIGFVNIKGGDRAGNGSILADVMIDELSVDQDICLQ 140
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ +++L G+ R L +R I Y + + T ++ L+ ++ ++
Sbjct: 141 QEILFLVGEIRRDIIPTKLSSAGFNIREIVTYKTCPLEDNLTRFQDALKPGSWVVLFSPQ 200
Query: 177 SVLYFFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + V+ P SLL +
Sbjct: 201 GTKDILDFLKQHPHLKCNVATIGPTTEKYMLDQGVKPNVVSPKPDCLSLLHSI 253
>gi|322371456|ref|ZP_08046005.1| uroporphyrinogen-III synthase [Haladaptatus paucihalophilus DX253]
gi|320548988|gb|EFW90653.1| uroporphyrinogen-III synthase [Haladaptatus paucihalophilus DX253]
Length = 246
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 67/244 (27%), Gaps = 22/244 (9%)
Query: 1 MYIVITRPI-KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M + + RP ++ + ++ +G PV P+ Q + +TS
Sbjct: 1 MKVAVFRPDDERLDEAVDLLESLGADPVPDPMLAVRPTD-----NAPQHAEYVVLTSKTG 55
Query: 60 LSTLPANFCRHT--PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ + AIGE +A R+ G+ + S +V K
Sbjct: 56 VELAHEAGWSPDGATVCAIGERTAATLREYGYDVDIVPDEFSSRG---LVATLADRVDGK 112
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK-NLLQNADAILFYARS 176
+ + D L + + Y + + + DA LF +
Sbjct: 113 SVEVARSDHGSEVLTDGLADAGADVHETVLYELVRPGGSGRSAELAADGDLDAALFTSSL 172
Query: 177 SVLYFFSLPLPAKISAAFL---------CLSNNIASAIPASYKNVVTVACFPKETSLL-K 226
+V +F I A + + + V V L +
Sbjct: 173 TVYHFLDAAEERGIRAEAVDGLEDATVGAIGDPTHDTASELDIRVDVVPETASFDRLARE 232
Query: 227 LLPL 230
+
Sbjct: 233 AVER 236
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 12/116 (10%), Positives = 27/116 (23%), Gaps = 8/116 (6%)
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
K ++ R D L + + ++ ++
Sbjct: 1 MKVAVFRPDDERLDEAVDLLESLGADPVPDPMLAVRPTDNAPQHAE-------YVVLTSK 53
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ V + A + A+ + +V V L+ L R
Sbjct: 54 TGVE-LAHEAGWSPDGATVCAIGERTAATLREYGYDVDIVPDEFSSRGLVATLADR 108
>gi|311748690|ref|ZP_07722475.1| uroporphyrinogen-III synthase [Algoriphagus sp. PR1]
gi|126577223|gb|EAZ81471.1| uroporphyrinogen-III synthase [Algoriphagus sp. PR1]
Length = 257
Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 62/241 (25%), Gaps = 19/241 (7%)
Query: 3 IVITRPIKKA--LRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSS 57
I++++P + + +K F + AI TS
Sbjct: 15 ILVSQPKPASGNSPYVQLAEKYNLKIDFRQFIKVEPVPSKEFRKQKIDILKHTAIIFTSR 74
Query: 58 ESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ A F I + +A ++ + +
Sbjct: 75 NAIDHFFAICKDFKIEMPAEMKYFCISDQTAHYLQKYIVIRKRKLFVGQKTAEDLF--DY 132
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ ++ R DY+ ++ I Y++ + D +
Sbjct: 133 FKKHKSEKYLFPCSDIRKDVIPDYMEKNGIDFTEAIIYHTLAADLSD----LAEVKYDIL 188
Query: 171 LFYARSSVLYF-FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F++ S + + P + A A+ + A P S+ L
Sbjct: 189 AFFSPSGIKSLKVNFPDFTQGKTRIATFGPTTAKAVRDLDLILDIEAPLPNAPSMTGALE 248
Query: 230 L 230
L
Sbjct: 249 L 249
>gi|315607062|ref|ZP_07882066.1| uroporphyrinogen-III synthase [Prevotella buccae ATCC 33574]
gi|315251116|gb|EFU31101.1| uroporphyrinogen-III synthase [Prevotella buccae ATCC 33574]
Length = 249
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 61/243 (25%), Gaps = 20/243 (8%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I++++P + + EK G V P F Y A+
Sbjct: 4 KILVSQPKPASEKSPYYDIEK--TYGVECVFRPFFKVEGITAKEFRQQKINLLDYTAVVF 61
Query: 55 TSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ F + E A ++ + + +V
Sbjct: 62 TSRHAIDNFFKLAKELRVTIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGTSGKMTDLV 121
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ N ++ L E + Y + + + + +
Sbjct: 122 PLMTKHRGN-KFLVPMSSVHNDDVKNLLDEKGLCHTECVMYRTVSNDFTDE--ERAHFDY 178
Query: 168 DAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D ++F++ + V + A I + A + S+
Sbjct: 179 DMLVFFSPTGVKALKKNVPHFEQGDIKIAAFGPATAKTIEEEGLRLDLQAPSKEFPSMTG 238
Query: 227 LLP 229
L
Sbjct: 239 ALE 241
>gi|288926854|ref|ZP_06420761.1| uroporphyrinogen-III synthase [Prevotella buccae D17]
gi|288336379|gb|EFC74758.1| uroporphyrinogen-III synthase [Prevotella buccae D17]
Length = 249
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 61/243 (25%), Gaps = 20/243 (8%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I++++P + + EK G V P F Y A+
Sbjct: 4 KILVSQPKPASEKSPYYDIEK--TYGVECVFRPFFKVEGITAKEFRQQKINLLDYTAVVF 61
Query: 55 TSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ F + E A ++ + + +V
Sbjct: 62 TSRHAIDNFFKLAKELRVTIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGTSGKMTDLV 121
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ N ++ L E + Y + + + + +
Sbjct: 122 PLMTKHRGN-KFLVPMSSVHNDDVKNLLDEKGLCHTECVMYRTVSNDFTDE--ERAHFDY 178
Query: 168 DAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D ++F++ + V + A I + A + S+
Sbjct: 179 DMLVFFSPTGVKALKKNVPHFEQGDIKIAAFGPATAKTIEEEGLRLDLQAPSKEFPSMTG 238
Query: 227 LLP 229
L
Sbjct: 239 ALE 241
>gi|306820607|ref|ZP_07454236.1| uroporphyrinogen-III synthase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551338|gb|EFM39300.1| uroporphyrinogen-III synthase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 493
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 8 PIKKALRTQEKIQKMGYIPVMMP--LSYFIHDR--ESVFLAMQQSYGAIAITSSESLSTL 63
P KK K+++ G V + L +D+ + + ++Y + +S+ ++
Sbjct: 261 PRKKNDYLIRKLRENGAQVVNLSTNLLEKNYDKMHFTNIIKSIKAYDYLCFSSTYAVDVF 320
Query: 64 PANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ I A+G +++ R + ++ + +++
Sbjct: 321 FEILSENNFDIRDLYNVKICAVGPSTSNTLRNRNIICDLIPQNYDAKT----LANQLIKL 376
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
K ++ + D L +H I + +D Y S ++ D +F +
Sbjct: 377 DAKNVVCILPHKVQSDLYDLLHKHNIKVERLDIYSST----IGKVRLYNEEDDDIFVFTS 432
Query: 175 RSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
VL ++ C+ VA LL L+
Sbjct: 433 SYGVLGLVESYKKNHFTSKLAFCIGEKTKQTAEKFGFK-TLVAEKSTYDELLDLICK 488
>gi|163732928|ref|ZP_02140372.1| uroporphyrinogen-III synthase, putative [Roseobacter litoralis Och
149]
gi|161393463|gb|EDQ17788.1| uroporphyrinogen-III synthase, putative [Roseobacter litoralis Och
149]
Length = 238
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 69/231 (29%), Gaps = 25/231 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIP--------VMMPLSYFIHDRESVFLAMQQSYGAIAI 54
+++TRP K G P + PL +S + Q
Sbjct: 10 VILTRPKGSNSVF-----KAGIAPNVRDRLEFIRSPLLEITPIEQSADCSGAQHA---IF 61
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
TS+ + L N + + + E +
Sbjct: 62 TSANGVK-LAPNGNGRRAFCVGRKTTELAQSHGWDGVFAGATVTG------LKEYVLTQQ 114
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FY 173
PQ + + G + L + + + Y + + + + L I+ +
Sbjct: 115 PQGEIHHYSGVFVRGNVAKELSAAGLNVMNVPLYDQRLLPFSAEALAVLQAKTPVIVPLF 174
Query: 174 ARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + +F ++ PA + +S+ +A ++ + + VA P S+
Sbjct: 175 SPRTAAHFGAMA-PAHPKLYIIAMSSAVADSLEEIAVSQLMVAQEPTAKSM 224
>gi|47214888|emb|CAG01019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 309
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 73/242 (30%), Gaps = 32/242 (13%)
Query: 1 MYIVITRPIKKAL----RTQEKIQKMGYIPVMMPLSYFIHDRESVFLA---MQQSYGAIA 53
M++++ + + E++ G+ ++P+ F + + +G +
Sbjct: 1 MHVLLLKEPRDGESGIDPYIEELAAHGHTAALVPVLAFAFVSSNTLSDKMFQPEKHGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKD---------------- 97
TS ++ + + + + +
Sbjct: 61 FTSPRAVEAVKMCLETQQRLEEWNKCVKDKWNARSIYVVGKATASLVRSLGLTPLGEDTG 120
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ LA++I+E++ P PL + G + L E +PL + Y + + E
Sbjct: 121 TAEVLARVIIEREDTNIP--PLFFPCGSIKREVLPVALRESGVPLETLTVYQTAEHPDLE 178
Query: 158 TTMKNLLQNADAIL---FYARSSVLYFFS----LPLPAKISAAFLCLSNNIASAIPASYK 210
++N F++ S V + L F + A+ A
Sbjct: 179 KNLRNYFTEQGVPASVAFFSPSGVKFCLEVVRRLSGEQLPQIKFAAIGPTTEEAMAAEGL 238
Query: 211 NV 212
V
Sbjct: 239 RV 240
>gi|163787234|ref|ZP_02181681.1| uroporphyrinogen-III synthase [Flavobacteriales bacterium ALC-1]
gi|159877122|gb|EDP71179.1| uroporphyrinogen-III synthase [Flavobacteriales bacterium ALC-1]
Length = 249
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 62/246 (25%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAI 52
M I++++P + + +K P + + AI
Sbjct: 1 MKVKTILVSQPEPKIENSPYFDLQEKQKVKVDFRPFIHVEGVSSKDIRQQKIDLSQFTAI 60
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS S+ F EA A ++ + A++
Sbjct: 61 ILTSRNSVDHFFRVADEMRFKVPDSMKYFCQSEAVAYYLQKYVVYRKRKIYVGKRTFAEL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + + L + + Y + +
Sbjct: 121 --SPLIKKYKDESFLLPTTDKVKPIIPETLDNLGVSWKQATFYKTVISDLSD----LADV 174
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + F K + N A+ V A P+ S+
Sbjct: 175 YYDILVFFSPSGIESLFHNFPDFKQNDTRIAVFGNTTVKAVKEKGLRVDIAAPTPETPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALKK 240
>gi|302381523|ref|YP_003817346.1| uroporphyrinogen III synthase HEM4 [Brevundimonas subvibrioides
ATCC 15264]
gi|302192151|gb|ADK99722.1| Uroporphyrinogen III synthase HEM4 [Brevundimonas subvibrioides
ATCC 15264]
Length = 226
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 15/232 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ +TR A RT E++ +G+ P+++PL ++ L A+A TS ++
Sbjct: 6 RVWVTRARPGADRTAERLTTLGHTPLVVPLLAIRPLDVALDL---DGVQALAFTSLNGVA 62
Query: 62 TLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
A + R P+ A+G+A+A AR+ GF + + LA ++ P + ++
Sbjct: 63 AFAALSTERALPVLAVGDATARAAREAGFASVRSADGDLQALAALV----RSAAPGQSVL 118
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ G + + +R I Y +Q T + D +L ++ +
Sbjct: 119 HPGALEPAGDLAAAVGDA-ARVRSIAVYGAQ------ETGAAPPGDWDTVLIHSPRAGRA 171
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
L +S A + + + +A P E +LL L R
Sbjct: 172 LAIALGDRPTLRLALAISAAAAEPLADAGFAEIRIAAAPTEAALLAALGNPR 223
>gi|254427123|ref|ZP_05040830.1| uroporphyrinogen-III synthase [Alcanivorax sp. DG881]
gi|196193292|gb|EDX88251.1| uroporphyrinogen-III synthase [Alcanivorax sp. DG881]
Length = 242
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/232 (12%), Positives = 56/232 (24%), Gaps = 17/232 (7%)
Query: 6 TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSSESLS 61
TRP + R + + GY P+ P L Y A+ S +
Sbjct: 13 TRPAGQQQRLMALLTEAGYQPLHQPALTIEPVPVDGAMQRTLMELDRYHAVFFASVNAAR 72
Query: 62 ---TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAKIIVEQKVLFTPQ 116
+ A+ P+ A + + N ++ + +
Sbjct: 73 LALSAMADLWPQWPVGVHWLAVGRATAAELASWHLPATVPEHGFNSEAVLALPCLQQLHE 132
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K ++ G L + + Y I+ + D ++ +
Sbjct: 133 KQVLICRGDSGRELLAQSLEARGARVDALAFYRRHGISGITLS-----TQTDWVMVTSVQ 187
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S A A V VA + +L L
Sbjct: 188 GWQALQSALPAGCGVVVAGARVAAAVQACHAG---PVRVAASAHDEDMLAAL 236
>gi|198428606|ref|XP_002128471.1| PREDICTED: similar to uroporphyrinogen III synthase [Ciona
intestinalis]
Length = 251
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 91/247 (36%), Gaps = 20/247 (8%)
Query: 1 MYIVITRPIKKA-LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYG---AIAITS 56
M IV+ R + K+G +P+ F + + I TS
Sbjct: 1 MKIVLMRASTGCNDEYVNTLNKIG-DVTSIPVLSFNFCNCDLIKDAISAPDSWSGIIFTS 59
Query: 57 SESLSTLP-------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
S+ + + P +A+GE++A +A GF N+ LA++IV++
Sbjct: 60 KRSVEAVQLSLDTPLSELWASKPCYAVGESTAKMAENLGFISKGGNSGNAQVLAELIVQE 119
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK---NLLQN 166
+ +PL+++ G+ + L ++IP I Y + + ++ + +
Sbjct: 120 Q-KLVNNQPLLFICGQLKRETLPSVLTCNEIPFHTITAYETVKNPVVDEAVQSYVEVNGS 178
Query: 167 ADAILFYARSSVLYFFS----LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
D I F++ S + F+ + + + A + + V A P
Sbjct: 179 PDFITFFSPSGHRFCFNTWQSALKGDFSATKIVAIGETTAHSFASQPDISVVTAERPNPE 238
Query: 223 SLLKLLP 229
SL K++
Sbjct: 239 SLFKIIK 245
>gi|99082668|ref|YP_614822.1| uroporphyrinogen III synthase HEM4 [Ruegeria sp. TM1040]
gi|99038948|gb|ABF65560.1| Uroporphyrinogen III synthase HEM4 [Ruegeria sp. TM1040]
Length = 245
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 83/231 (35%), Gaps = 17/231 (7%)
Query: 3 IVITRPIKKALRTQEKI-----QKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
+++TRP+ A R + + +++ + PL L A+ TS
Sbjct: 8 LLMTRPLSAAQRFVDLLPSEMCREL--PIIYSPLMEIAPL---QGLIDLGGIDAVIFTSG 62
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
E + A + +GE +A A + G + A +VE + P
Sbjct: 63 EGVRVASAAQPLRLRAYCVGERTASAACEAG-----WSAQFVGDTADTLVEALLASRPSG 117
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARS 176
L++L G+ + L E + Y L I+ ++
Sbjct: 118 KLLHLHGEYTRGAVAERLSEGGVSCSGQAIYRQALCPLSAEAEAALTAQIPLIVPLFSPR 177
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ +F SL P K + + +S+ +A A+P V V+ FP ++ +L
Sbjct: 178 TAAHFDSLC-PEKAHLSLIAMSDAVAEAMPRLQSRVRHVSKFPTAEAMAEL 227
>gi|282904241|ref|ZP_06312129.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
C160]
gi|282595859|gb|EFC00823.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
C160]
Length = 222
Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 59/203 (29%), Gaps = 9/203 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ P + L Q Y + +S ++ S
Sbjct: 20 IIHKPFIDIKPLNFDIHLLN-QRYDWLIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQY 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ N + + + ++ + L E + I
Sbjct: 79 CESLGIRVDFMPNDFSQEGFLE---SFNQTNQKILLPSSELARPLLSAALSEDN-EVVKI 134
Query: 146 DCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y S +K ++++ + F + S+V Y+F+ K + + + A
Sbjct: 135 DLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLK 226
I + + VT+A SL++
Sbjct: 194 TIKSY-QQPVTIAEIQTLESLIE 215
>gi|119947243|ref|YP_944923.1| uroporphyrinogen III synthase HEM4 [Psychromonas ingrahamii 37]
gi|119865847|gb|ABM05324.1| uroporphyrinogen-III synthase [Psychromonas ingrahamii 37]
Length = 244
Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 58/236 (24%), Gaps = 11/236 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSES 59
+++TR A R + G + PL E + ++Y I S +
Sbjct: 5 RLLVTRFAPHAQRLVNLLNAQGTVAFAQPLLALQKTTEFNHASKVLAKNYDYIIAVSPNA 64
Query: 60 LSTLPA---NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + + TQ + + ++ +L
Sbjct: 65 VDYTQKALAGINWPQTEYLAVGLATQAKLKAATTQNVVVPEKCFDSEGLLDLPLLLNLQG 124
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYA 174
K ++ L G D L + + Y I + Q + + +
Sbjct: 125 KHILILRGVGGRELLCDTLRQRGAIVDYYQPYQRVAIVLCGKALIKEWQQQNINGAIISS 184
Query: 175 RSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ S+ S I + V + ++
Sbjct: 185 IELLERLMSVVPLAAHEWLKELTIYAPSERILDQAKRWGWSNTKVLPGMSDQQVID 240
>gi|84684557|ref|ZP_01012458.1| uroporphyrinogen-III synthase, putative [Maritimibacter
alkaliphilus HTCC2654]
gi|84667536|gb|EAQ14005.1| uroporphyrinogen-III synthase, putative [Rhodobacterales bacterium
HTCC2654]
Length = 221
Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 19/225 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP + + R + G ++ P++ SV Y + +TS+ ++S
Sbjct: 7 VILTRPREASERVAAALS--GIDVIVSPVTEIKGTGASVD---PGEYAGLILTSAHAVSF 61
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
LP P++ +G +A + + D + PL++
Sbjct: 62 LPDL--AGVPVYCVGARTAEASGGEVRLVARDADDLVQRIEAE-----------GPLLHA 108
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSVLYF 181
G+ + L I + Y L IL ++ S
Sbjct: 109 RGRETRGEIAERLNSAGIETHECEVYAQIARDLSPEAKAALEGQDRMILPLWSPRSAERV 168
Query: 182 FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + LS +A+A ++ V P ++
Sbjct: 169 GDQLARIGSNLHVIALSPAVATAWTSATGGRSEVCTDPDGDEMIA 213
>gi|167767183|ref|ZP_02439236.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1]
gi|167711158|gb|EDS21737.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1]
gi|291559492|emb|CBL38292.1| porphobilinogen deaminase [butyrate-producing bacterium SSC/2]
Length = 780
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/232 (8%), Positives = 51/232 (21%), Gaps = 13/232 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
++T+ + + + ++ GY + + + + + TS +
Sbjct: 544 LVTKIGDQPSKLAQILKDHGYKVKELQTGEISYRYDWISKEELAKVTYLIFTSRYGVHGF 603
Query: 64 PANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
R I I + E K
Sbjct: 604 MKQMKSSNLDIRDLFDKKIVVVGKKTKDVLMQYGIIADLMPEEAGEINLSELMKQEVDAK 663
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+++ + + Y + E +++ + F SS
Sbjct: 664 DVVWYCKGISGGEKLKKALTPICQVTEKVMYENNRKILSEIPEMKDIRS---VSFTCASS 720
Query: 178 VLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
FF K + + + + + + S+
Sbjct: 721 ARRFFDQIGEEKQQWIENIPCISIGEKTTKQLREIGVRHILESKDTTYVSMF 772
>gi|126738546|ref|ZP_01754251.1| uroporphyrinogen-III synthase, putative [Roseobacter sp. SK209-2-6]
gi|126720345|gb|EBA17051.1| uroporphyrinogen-III synthase, putative [Roseobacter sp. SK209-2-6]
Length = 235
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 68/229 (29%), Gaps = 15/229 (6%)
Query: 6 TRPIKKALRTQEKI-QKMG--YIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
TR + R + Q + + PL +A + TS+ +++
Sbjct: 2 TRRPADSDRFLALLPQDLLDTLNVIHAPLLQIQPLSVEPVIADLG---GVIFTSANGVAS 58
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
P R + + A +V P+ PL++L
Sbjct: 59 SPPPAQRLPAYCVGKRTTKAARERGWDAVCSGAN------ADELVAHLTSQMPKGPLLHL 112
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSVLYF 181
G+ + L + + Y + + + I+ ++ + +F
Sbjct: 113 HGQHTRGNVAQRLCAVGLTCEGLTVYEQKLLPLEPAQRAEIAAQNRVIVPLFSPRTARHF 172
Query: 182 FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
SL +++ LS +AS + + V+ P S+ +
Sbjct: 173 ASL-GLDQMNLTLFALSEAVASELKGLQSKGLQVSKAPVAESM-AAMVR 219
>gi|319952584|ref|YP_004163851.1| uroporphyrinogen-iii synthase [Cellulophaga algicola DSM 14237]
gi|319421244|gb|ADV48353.1| uroporphyrinogen-III synthase [Cellulophaga algicola DSM 14237]
Length = 248
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 61/246 (24%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAI 52
M I++++P + I K P + ++ AI
Sbjct: 1 MKVKTILVSQPEPKMENSPYSRLIDKEKVKVDFRPFIHVEGVDAKTVRQQKIDLNNFTAI 60
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ F EA A ++ + +N +
Sbjct: 61 ILTSRNAVDHFFRIAEEMRFKVPDSMKYFCQSEAVAYYLQKYVVYRKRKIYVGKMNFQDL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
K + + + L + Y + +
Sbjct: 121 STLFKKY--KDEKFLLPSSDSLKPIVPETLDALGLNWTRGIFYKTVVSDLSD----LKDV 174
Query: 166 NADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + + N+ +A + + A P+ S+
Sbjct: 175 YYDILVFFSPSGIESLLKNFPDFEQKDTRIAVFGNSTVAAATDAGLRIDIKAPTPETPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALQK 240
>gi|88603513|ref|YP_503691.1| uroporphyrinogen-III synthase-like protein [Methanospirillum
hungatei JF-1]
gi|88188975|gb|ABD41972.1| Uroporphyrinogen-III synthase-like protein [Methanospirillum
hungatei JF-1]
Length = 231
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 63/221 (28%), Gaps = 18/221 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPV-MMPLS-YFIHDRESVFLAMQQS--YGAIAITS 56
M I ITR K Q + + G+ + PL D+ F+ + + I TS
Sbjct: 1 MRIAITRLKGKEGDDQARCARRGHDCYPVSPLIGEMNPDQIDAFIQDVKDRRFDCIFFTS 60
Query: 57 SESLSTLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + AIG +A R+ G + S + + V
Sbjct: 61 ALPAHQIGPYLHDLPLPRVIAIGPQTAKALREFGIMCEVLHEFYSRAFVPFLGDWIV--- 117
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
K + N + + Y L A+ ILF +
Sbjct: 118 -GKKIGIPRSDAPNDKLLQGIRDAGGFPIEFQIYALIPTYEL-----LNLDKAEGILFTS 171
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTV 215
L F S + + + A A+ + V
Sbjct: 172 ---ALSFKSAIWKRREDLILMAIGEVTAGAMEEAGLMPDVV 209
>gi|83308732|emb|CAJ01642.1| conserved hypothetical protein, similar to bll6177 of
Bradyrhizobium japonicum [Methylocapsa acidiphila]
Length = 252
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 79/231 (34%), Gaps = 12/231 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TR + + RT K+ G+ ++ P+ + G + TSS++
Sbjct: 1 MLVLLTRALDEGTRTAIKLASSGHRAILSPVLDMVPTG---AEWPHGVVGGVLATSSQAF 57
Query: 61 STLPANFCRHTP----IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+P + + A + + ++
Sbjct: 58 ELFSDAPEWPSPEARRLLPLYLVGARTKDAARERGFEGAALIAADAKELAASVAANVEAS 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYA 174
+ L+YL G+ R E L E + I+ Y +Q L +L Y+
Sbjct: 118 RRLLYLAGRDRKPDLEKTLAEAGKRIETIEVYSAQAAESLSDEAAAALGAGTIGAVLHYS 177
Query: 175 RSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKET 222
R S F SL A + + +S + A+ + A+ + + VA P E
Sbjct: 178 RRSAEIFLSLARRAGLDVSKMPHVAISADAAAPLRAAGFDEMHVAEQPNEQ 228
>gi|293194047|ref|ZP_06609929.1| uroporphyrinogen-III synthase [Actinomyces odontolyticus F0309]
gi|292819801|gb|EFF78810.1| uroporphyrinogen-III synthase [Actinomyces odontolyticus F0309]
Length = 268
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 63/239 (26%), Gaps = 14/239 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS------YGAIAIT 55
I++TR ++ + +S L + + + +
Sbjct: 14 RILLTRTKSD-DAIARALRTAEAQVDAL-ALTVSTPLDSAQLDAARDRLADGGFAWVVFS 71
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLF 113
S + + + R + A + D + + A ++
Sbjct: 72 SWRAARAVVSGLPRARSLGTRIAAVGEATARWISDHAGVSADVTGAGSAAALLECFPAPA 131
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA----YPETTMKNLLQNADA 169
+ ++P++ D L + +D Y + + + DA
Sbjct: 132 SGERPVLIPRSAAAPDTLPDGLRALGWSVEAVDAYTTTHADATDIPDDIAGNFRAGHYDA 191
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ A S L S + + A+ V A P ++++ L
Sbjct: 192 AVLTASSQARALAPLLGLPPPSTRVVTIGAPTAATASRQGIAVAAQASSPTPDAIVRAL 250
>gi|150009640|ref|YP_001304383.1| uroporphyrinogen-III synthase [Parabacteroides distasonis ATCC
8503]
gi|255013079|ref|ZP_05285205.1| uroporphyrinogen-III synthase [Bacteroides sp. 2_1_7]
gi|256838686|ref|ZP_05544196.1| uroporphyrinogen-III synthase [Parabacteroides sp. D13]
gi|262383074|ref|ZP_06076211.1| uroporphyrinogen-III synthase [Bacteroides sp. 2_1_33B]
gi|298374037|ref|ZP_06983995.1| uroporphyrinogen-III synthase [Bacteroides sp. 3_1_19]
gi|301307633|ref|ZP_07213590.1| uroporphyrinogen-III synthase [Bacteroides sp. 20_3]
gi|149938064|gb|ABR44761.1| possible uroporphyrinogen-III synthase [Parabacteroides distasonis
ATCC 8503]
gi|256739605|gb|EEU52929.1| uroporphyrinogen-III synthase [Parabacteroides sp. D13]
gi|262295952|gb|EEY83883.1| uroporphyrinogen-III synthase [Bacteroides sp. 2_1_33B]
gi|298268405|gb|EFI10060.1| uroporphyrinogen-III synthase [Bacteroides sp. 3_1_19]
gi|300834307|gb|EFK64920.1| uroporphyrinogen-III synthase [Bacteroides sp. 20_3]
Length = 253
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 63/242 (26%), Gaps = 18/242 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ T+
Sbjct: 7 KLLVSQPKPASEKSPYFDIAEKYGVEIDFRPFIKVEPLSSKEFRQQRISVLDHTAVIFTA 66
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + A +V
Sbjct: 67 RTAIDHFFHLCEELRVAIPETMKYFCMTEAIAVYLQKYIVYRKRKIFYGQTGKADDLVTV 126
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + L KI + + K+ + D
Sbjct: 127 IAKHAK-EKYLVPVSDVHKDDLFALLDAKKINYTKAVMFRTV----SNDFAKDEKFDYDM 181
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ S + K C A A+ + + A + S+ L
Sbjct: 182 LVFFSPSGISSLLKNFPDFKQDDIKIGCFGPTTAKAVKDAGLRLDVEAPTVEAPSMTAAL 241
Query: 229 PL 230
L
Sbjct: 242 DL 243
>gi|121605980|ref|YP_983309.1| uroporphyrinogen III synthase [Polaromonas naphthalenivorans CJ2]
gi|120594949|gb|ABM38388.1| uroporphyrinogen-III synthase [Polaromonas naphthalenivorans CJ2]
Length = 287
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/276 (9%), Positives = 61/276 (22%), Gaps = 50/276 (18%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS-------YGAIAI 54
+++TRP A ++++ G L + Y A
Sbjct: 5 RVIVTRPAPDAALWVRQLEQAGIAAEAFELIDIAPVGSAADAQALGDAWLALDAYAACLF 64
Query: 55 TSSESLSTLPA------------------------NFCRHTPIFAIGEASACLARQKGFT 90
S ++ A G + R G
Sbjct: 65 VSGHAVEHFFKENKAFAQGGYAQAAINNIANSGLRRIPPGLRFMAPGPGTVAALRAAGVP 124
Query: 91 QIFH----GKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPR--------NFHFEDYLIEH 138
+ + + + ++ + G+
Sbjct: 125 AAQIDAPAADASQFDSEALWRVVGARDWQGRKVLIVRGQSAGAQGATSGRDWIVRQWQGA 184
Query: 139 KIPLRVIDCYYSQDIAYPETTM---KNLLQNADAILFYARSSVLYFFSLPLPAKISA--- 192
+ + Y + + + + + LF + +V +
Sbjct: 185 GASVDFVGVYQRRAPILTDAQVARARQASADGSVWLFSSSEAVANLVGQAGLQGVDWGRA 244
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ IA A+ A+ VV + P + + L
Sbjct: 245 RAVATHPRIAQAVRAAGWGVVVES-RPALKDIRQAL 279
>gi|160937982|ref|ZP_02085339.1| hypothetical protein CLOBOL_02875 [Clostridium bolteae ATCC
BAA-613]
gi|158438976|gb|EDP16731.1| hypothetical protein CLOBOL_02875 [Clostridium bolteae ATCC
BAA-613]
Length = 514
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 59/242 (24%), Gaps = 24/242 (9%)
Query: 6 TRPIKKALRTQEKIQKMGYIPVMMPLSY---FIHDRESV---FLAMQQSYGAIAITSSES 59
TR + +++ G + P+ H + +Y + TS+
Sbjct: 265 TRHFTDS--LGHALKQEGAVVS--PILEMKVISHTKCPAMQEAYRNLAAYTWLIFTSANG 320
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQK-------GFTQIFHGKDNSINLAKIIVEQKVL 112
+ + + F +S + +
Sbjct: 321 VRLFFQEMQHSGMDYRLLGHIKFAVIGDGTGRELANFGFHADYMPDSFCAEALARGLASI 380
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
T ++ K + L + + I Y + E + D I F
Sbjct: 381 LTDSDRILIARSKGGSPVLTSILEKAGLVYDDIVLYQVEGRLASEQRQAE--EGFDYITF 438
Query: 173 YARSSVLYFFS-----LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ S V + S P +C+ + A + A L++
Sbjct: 439 ASASGVRAYLSSGLNINPGQRTGQTRLVCIGDITAGELKKHGIKADITAGTYHIQGLVQA 498
Query: 228 LP 229
+
Sbjct: 499 IA 500
>gi|150020603|ref|YP_001305957.1| uroporphyrin-III C-methyltransferase [Thermosipho melanesiensis
BI429]
gi|149793124|gb|ABR30572.1| uroporphyrin-III C-methyltransferase [Thermosipho melanesiensis
BI429]
Length = 464
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 67/226 (29%), Gaps = 19/226 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSES 59
I+ITR + + + +++ G I +P I E++ F+ +Y +I TS
Sbjct: 236 KILITR--EYSSEF-DLLEEQGAIVYCIPTFKIIPKYENIKDFMKKIDNYKSIVFTSKNG 292
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + + + +N ++ + + L
Sbjct: 293 VIFFFETL----KMIKMDVRKIKADIAVVGEKTSKLLENYGIYPTLVGKTAKDIYDKITL 348
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-DAILFYARSSV 178
+ I Y + I +T ++ ++ + D ++F + SS
Sbjct: 349 PCATLTSNISTVPT-------HIYKITAYENIPILKNKTKLQKIINDKVDYVVFTSPSSF 401
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
YF ++ S + S I V L
Sbjct: 402 HYFRNMV--TLTSEIICAIGATTKSEIEKRGYKVHITPKKATFEEL 445
>gi|332881507|ref|ZP_08449156.1| uroporphyrinogen-III synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332680505|gb|EGJ53453.1| uroporphyrinogen-III synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 247
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/242 (10%), Positives = 60/242 (24%), Gaps = 22/242 (9%)
Query: 2 YIVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIA 53
I++++P + K G V P F Y A+
Sbjct: 4 KILVSQPKPTSEKSPYFEIASK---YGVEVVFRPFIKIEGLSAKEFRQQKVSILDYTAVV 60
Query: 54 ITSSESLSTLP------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ + + L QK +
Sbjct: 61 FTSRNAIDHFFLLCKELRVTIPEDMKYFCITETIALYIQKYVQYRKRKVFFGSTGKVDDL 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
++ + + N + L K+ + + Y + + +
Sbjct: 121 LPSMVKHKTEKYLVPLSDVHNDEITNLLDSKKLIHKEVVMYRTV----SNDFKSDEKFDY 176
Query: 168 DAILFYARSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D ++F++ S + + + A A+ + + A + S+
Sbjct: 177 DMLIFFSPSGIQALLKNFPDFEQKEIAIGTFGPATAQAVKDAGLRLDMEAPTSQYPSITA 236
Query: 227 LL 228
L
Sbjct: 237 AL 238
>gi|319792196|ref|YP_004153836.1| uroporphyrinogen iii synthase hem4 [Variovorax paradoxus EPS]
gi|315594659|gb|ADU35725.1| uroporphyrinogen III synthase HEM4 [Variovorax paradoxus EPS]
Length = 260
Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 74/253 (29%), Gaps = 27/253 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
+++TRP ++A++ + ++ G V +PL ++ L + Y A+ S+
Sbjct: 6 VIVTRPAREAVQWVDDLRAAGLDAVALPLIVIEPVHDAEPLRAAWRRIEDYAALMFVSAT 65
Query: 59 SLSTLPA--------NFCRHTPIFAIGEASACLARQKGFTQI----FHGKDNSINLAKII 106
++ +A G + + G + + +
Sbjct: 66 AVEHFFQSRDADSSDEAMAGRRFWATGPGTTRALLRAGVPPEAIDAPPPEATRFDSEALW 125
Query: 107 VEQKVLFTPQKPLIYLGGKPR------NFHFEDYLIEHKIPLRVIDCYYSQDIAYP---E 157
+ + ++ + G + + Y +
Sbjct: 126 ERVQAQVSTGVRVLIVRGGDEAGQPAGRDWLAKEIDAASGQRDTVVAYRRLPPLFDVGQR 185
Query: 158 TTMKNLLQNADAILFYARSSVLYF-FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ Q LF + ++ ++P +A+ + I A A+ + V
Sbjct: 186 QLAIDGAQGRAIWLFSSSEAIANLQRAMPGTDWHAASAVATHARIGEAARAAGFGALRVC 245
Query: 217 CFPKETSLLKLLP 229
P +L+ +
Sbjct: 246 -TPLRDALIASIE 257
>gi|325283648|ref|YP_004256189.1| Uroporphyrinogen III synthase HEM4 [Deinococcus proteolyticus MRP]
gi|324315457|gb|ADY26572.1| Uroporphyrinogen III synthase HEM4 [Deinococcus proteolyticus MRP]
Length = 261
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 76/236 (32%), Gaps = 17/236 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+T + + Q+ G+ + P F ++ L SY + +TS + +
Sbjct: 16 RVVVTLTGTGGEQLAARAQQTGWQVSLWPGLTFEPTGQAQELRALGSYSWLVLTSPQGVR 75
Query: 62 TLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+L A + A+GE +A G F + +
Sbjct: 76 SLTAGLAEQGLGPSALAGLRVAAVGEGTARPLAAWGRPADFLPTQADARTLAAELPVGLG 135
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+++ G+ + L R ++ Y S + YP + L+ AD ++
Sbjct: 136 D----TVLHATGEDSRDQLQRGLEGRGAAYRRLELYRSCAVRYPPQ-ARRDLRQADWVVV 190
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ PA L + A+A A+ V A P +L L
Sbjct: 191 ASGVVARGLAEQLGPAL---PLLAMGQQTAAAARAAGFIRVVPAQTPSLDGILATL 243
>gi|171057454|ref|YP_001789803.1| uroporphyrinogen III synthase HEM4 [Leptothrix cholodnii SP-6]
gi|170774899|gb|ACB33038.1| Uroporphyrinogen III synthase HEM4 [Leptothrix cholodnii SP-6]
Length = 267
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/252 (11%), Positives = 68/252 (26%), Gaps = 29/252 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL-----AMQQSYGAIAITSS 57
+++TRP +A E+++ +G PL + S
Sbjct: 12 LLVTRPQPQADEWVERLRGLGQPACAAPLMVIEPVAAFAAAVQAAWQRLADCRMVMFVSP 71
Query: 58 ESLSTLPANFCRHTPIF------AIGEASACLARQ---KGFTQIFHGKDNSINLAKIIVE 108
++ A P A G + + + D A+ +
Sbjct: 72 NAVLQFFAQRPAGLPWPTDTLAAATGPGTVAALQSKGVAAAQIVAPAADADQFDAETLWL 131
Query: 109 QKVLFTPQ--KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----- 161
Q++ + ++ + G+ L H + ++ Y A+ +
Sbjct: 132 QRLESQTWAGRQVLIVRGEDGRDWLASTLRHHGAQVDLLAAYRRTAPAWSGELLDLLQRV 191
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTV 215
A LF + ++ + + A + + IA + V
Sbjct: 192 RQRPQDYAWLFSSSQAIGHLAAFMQTAPQAWRALHDVPAVATHLRIAQTATSLGWRTVL- 250
Query: 216 ACFPKETSLLKL 227
P +L+
Sbjct: 251 PLTPD-AALIAA 261
>gi|87200800|ref|YP_498057.1| uroporphyrinogen-III synthase [Novosphingobium aromaticivorans DSM
12444]
gi|87136481|gb|ABD27223.1| uroporphyrinogen-III synthase [Novosphingobium aromaticivorans DSM
12444]
Length = 226
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 81/239 (33%), Gaps = 26/239 (10%)
Query: 1 MYIV---ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M ++ + RP T ++ G + PL R SV + AI S+
Sbjct: 1 MKLLPLIVIRPEPGNAATIAAARERGLHAIGYPLFRIEPTRWSVAE---GRFEAILAGSA 57
Query: 58 ESLSTLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+H P+ A+GEA+A AR GFT + G+ + + +
Sbjct: 58 NIFRHGGPQLDALKHLPVIAVGEATASAARAAGFTVVRTGEGGLQPVVETLAP------- 110
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ + + Y ++ + P+ + +L +L ++
Sbjct: 111 -----GTYLRLAGEDRVTLAPPPGVRIETAVVYAARPVPLPDE-LVAVLARPAVVLLHSG 164
Query: 176 SSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
++ +F I S CL+ IA+ + +A ++ LL+ L R
Sbjct: 165 AAAKHFRQQCERTGITRESLYLACLAPRIAALAGD-GWGDLRIADSRTDSDLLE-LGRR 221
>gi|220924337|ref|YP_002499639.1| Uroporphyrinogen III synthase HEM4 [Methylobacterium nodulans ORS
2060]
gi|219948944|gb|ACL59336.1| Uroporphyrinogen III synthase HEM4 [Methylobacterium nodulans ORS
2060]
Length = 262
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 85/230 (36%), Gaps = 13/230 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ + RP+ RT + +G+ P++ P+ S + A+ +TS+ ++
Sbjct: 18 RVWVARPLPAGARTAALVSDLGHAPLLAPVLD---LGLSHAPPPDGVFDALILTSANAVP 74
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
L + H F +G +A AR G + G+ ++ LA + L++
Sbjct: 75 ALESAGLIHLTAFCVGARTAQAARAAGLPDVRQGEGDAAALA---GHVAAVLPVGARLLH 131
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSVL 179
G+ R L + Y ++ +A + L A+L Y+R S
Sbjct: 132 AAGRERKPEPAASLAAAGYAVTAWVAYAARPVASLPEPVAAALAEGRLDAVLHYSRRSAA 191
Query: 180 YFFSLPLPAKISAAFL-----CLSNNIASAIPASYKNVVTVACFPKETSL 224
L A AF CLS + A+ + + VA P E +L
Sbjct: 192 TALGLARAAGCDEAFARLAHLCLSEDCAAPLVGAGIQSHLVAAQPTEDAL 241
>gi|83941983|ref|ZP_00954445.1| uroporphyrinogen-III synthase, putative [Sulfitobacter sp. EE-36]
gi|83847803|gb|EAP85678.1| uroporphyrinogen-III synthase, putative [Sulfitobacter sp. EE-36]
Length = 246
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 71/225 (31%), Gaps = 14/225 (6%)
Query: 3 IVITRPIKKALRTQEKIQKM---GYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++TRP + + V+ PL V L G + TS+
Sbjct: 19 LILTRPAPACVAFAASLPDALLSRVRVVISPLLQIRPTAVPVDL---GGIGGVIFTSANG 75
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
++ PA A A A+ A ++ P PL
Sbjct: 76 VAHGPAGDTLPAYCVGEATAQAAAAKGWQVAFH-------APDAAHLLPMIKAHRPATPL 128
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
++L G + + L + +P R + Y + + L + ++ +
Sbjct: 129 LHLRGTHQRGDIAERLTQAGLPTRPVVLYDQRALPLTRDAQAALADGPSIVPLFSPRTAA 188
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
F + + + LS +A A+ + + +A P TSL
Sbjct: 189 QFADQACETRRAT-IIALSPAVAEALDRTVVQQMLIAPEPTATSL 232
>gi|239637533|ref|ZP_04678505.1| uroporphyrinogen-III synthase [Staphylococcus warneri L37603]
gi|239596751|gb|EEQ79276.1| uroporphyrinogen-III synthase [Staphylococcus warneri L37603]
Length = 222
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 58/206 (28%), Gaps = 13/206 (6%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC--RHTPIFAIGEASAC 82
+ P L +Y + +S ++ I +GE +A
Sbjct: 19 TIIHKPFIDIKPLEFDSRLLK-DNYDWLIFSSKNAVKFFLPYMHVVNFKKIAVVGEKTAQ 77
Query: 83 LARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPL 142
R +D S + ++ K D L +
Sbjct: 78 YCRALKIPVDLIPQDYSQEG-----LINQFQKYNQRILIPSSKQARPLLRDTL-ARNNNV 131
Query: 143 RVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFSLPLPAKISAAFLCLSNN 200
ID Y +K+L+ N + F + SSV Y+F+ K + +
Sbjct: 132 VKIDLYEPVPHYKHIDEVKSLIFNNKIDALTFSSSSSVRYYFNEDPKPKFDY-YFAIGKQ 190
Query: 201 IASAIPASYKNVVTVACFPKETSLLK 226
A+ + + VA SL+
Sbjct: 191 TANTLHSYN-QPAIVANKQTLESLID 215
>gi|331003910|ref|ZP_08327399.1| hypothetical protein HMPREF0491_02261 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411930|gb|EGG91330.1| hypothetical protein HMPREF0491_02261 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 497
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 66/241 (27%), Gaps = 14/241 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH--DRESVFLAMQQSYGAIAITSSES 59
I++T + + + +G M L F + I +TS+
Sbjct: 258 NILLTATRSLTEKMAPEFKALGANVCEMSLIATKEMEIERDKFTLELELATHILLTSANG 317
Query: 60 LSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ ++ I IG SA ++ G F + E
Sbjct: 318 VDIFFEKIKKYDLDIRSLHNKKICVIGSGSASALKKYGVRADFIPSKFDSKS--FLEEMV 375
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ ++ L K N + L I I Y + + + ++N D I
Sbjct: 376 TELNEKSRVLMLRAKLGNDILPNGLKAAGIKFCDIPIYDTIIDYRRKFELNKEIKNFDYI 435
Query: 171 LFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + S+ + + + + A+ V A ++ +
Sbjct: 436 VLASASAAKALCEMIEDMNALKERVVSIGPMTTKALMEFGIEEVITANQYDVKGIVDAIR 495
Query: 230 L 230
Sbjct: 496 K 496
>gi|291528491|emb|CBK94077.1| uroporphyrin-III C-methyltransferase [Eubacterium rectale M104/1]
Length = 495
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/231 (12%), Positives = 64/231 (27%), Gaps = 12/231 (5%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP 64
IT P K K+Q++G + F +S I TS + +
Sbjct: 258 ITVPYIKTNELIAKLQQLGADVTPVKTGIINPIIIPEFADKVRSADWIVFTSKNGVRSFF 317
Query: 65 ANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
N + +G+A+ + + + + +
Sbjct: 318 YNLELAGADIRLIANARFAVVGKATEKELVKHHINADIIPAEQTGKELAGELSSYMGDND 377
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ + K + E L E ++ Q ++ N++ +F +
Sbjct: 378 EIKVCIFSAKEASPDLEAGLKEICELEKIDAYVNEQAYESIPESIGNMVSE---AVFTSA 434
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V FF + + +A+ + A +L+
Sbjct: 435 SNVERFFHMLPENAYVETAYSIGEKTTAALEQHNVREIVQADDSSYEALVD 485
>gi|281421503|ref|ZP_06252502.1| uroporphyrinogen-III synthase [Prevotella copri DSM 18205]
gi|281404575|gb|EFB35255.1| uroporphyrinogen-III synthase [Prevotella copri DSM 18205]
Length = 249
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 63/242 (26%), Gaps = 18/242 (7%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I++++P + + + + G V P F Y A+
Sbjct: 4 KILVSQPKPASEKSPYFDIQA--QYGVECVFRPFFKVEGLSSKEFRQQKINLLDYTAVVF 61
Query: 55 TSSESLSTLPANFCRHTPI------FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
TS ++ + + L QK +
Sbjct: 62 TSRHAVDNYFKLAKEMRITIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGDTGKIDGLM 121
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
++ + + N + L E K+ Y + + E +KN + D
Sbjct: 122 GQMARHKTEKYLVPLSSVHNDDIANLLDEKKLNHTECVMYRTVSNDFSEEEIKNF--DYD 179
Query: 169 AILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+LF++ + V + + A A + + A S+
Sbjct: 180 MMLFFSPTGVKALKKNFPNFEQGNIAVGAFGPATAKTVEEEGLRLDLEAPNKAFPSMTGA 239
Query: 228 LP 229
L
Sbjct: 240 LA 241
>gi|294674938|ref|YP_003575554.1| uroporphyrinogen-III synthase [Prevotella ruminicola 23]
gi|294472545|gb|ADE81934.1| uroporphyrinogen-III synthase [Prevotella ruminicola 23]
Length = 249
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 63/244 (25%), Gaps = 22/244 (9%)
Query: 2 YIVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIA 53
I++++P + K G V P F A + AI
Sbjct: 4 KILVSQPKPTSEKSPYFDIANKF---GVELVFRPFIKVEAISSKDFRAQKVNILDHTAIV 60
Query: 54 ITSSESLSTLPAN-------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
TS ++ F + E A ++ + +
Sbjct: 61 FTSRHAIDHFFNMAKELRINIPEDMKYFCVTETIALYIQKYVQYRKRKIFFGETGRIDDL 120
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ V + + + L K+ Y + + E +KN +
Sbjct: 121 IPTMVK-HKTEKYLVPLSDVHTDSLANLLDSKKLQHTECVMYKTVSNDFTEEEVKNF--D 177
Query: 167 ADAILFYARSSVLYFFSLPLPAKISAAFLC-LSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F++ + + K + A A + + A K S+
Sbjct: 178 YDMLIFFSPAGIESLTKNFPNFKQDKIAIATFGPATAKAAKEAGLRLDIEAPNEKYPSMT 237
Query: 226 KLLP 229
L
Sbjct: 238 GALQ 241
>gi|91216082|ref|ZP_01253050.1| possible uroporphyrinogen-III synthase [Psychroflexus torquis ATCC
700755]
gi|91185599|gb|EAS71974.1| possible uroporphyrinogen-III synthase [Psychroflexus torquis ATCC
700755]
Length = 245
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/245 (11%), Positives = 64/245 (26%), Gaps = 22/245 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAI 52
M I+I++P + E +++ +P + + AI
Sbjct: 1 MKVKSILISQPKPNVENSPYSELEERLKLKIDFIPFIHVEPVDSKEVRQQKIDITKFSAI 60
Query: 53 AITSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ F + EA A ++ + ++
Sbjct: 61 ILTSRNAVDHFFRIAEEMRYKIPDSLKYFCLSEAVAFYLQKYVVYRKRKIYVGKRTFQEL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
E + + + L + + Y +
Sbjct: 121 --EVSIKKHKDEKFLLPSSDMLKSMVPQQLDKLGVDWTRGIFYKTVVSDLS----HLREV 174
Query: 166 NADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ D ++F++ S + + + + N+ A V A PK S+
Sbjct: 175 SYDIVVFFSPSGIKSLYENFPDFEQKNTRIAAFGNSTIKAAEEKGLKVQIQAPTPKTPSM 234
Query: 225 LKLLP 229
+
Sbjct: 235 TMAIE 239
>gi|332292099|ref|YP_004430708.1| Uroporphyrinogen III synthase HEM4 [Krokinobacter diaphorus
4H-3-7-5]
gi|332170185|gb|AEE19440.1| Uroporphyrinogen III synthase HEM4 [Krokinobacter diaphorus
4H-3-7-5]
Length = 248
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 64/246 (26%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAI 52
M I++++P + E Q+ +P + + Y AI
Sbjct: 1 MKVKTILVSQPKPKVENSPYFELEQRQRVKIDFIPFIHVEGVSGKEVRLQKVDLKDYTAI 60
Query: 53 AITSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ F EA A ++ + ++
Sbjct: 61 ILTSRNAVDHFFRIAEEMRFKVPDTLKYFCQSEAVAYYLQKYVVYRKRKIYVGKRTFPEL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
I K + + + + L + Y + E
Sbjct: 121 IPLIKKH--KNETFLLPSSDKFKPNVPELLDALGVKWMQSTFYKTVVSDLSE----YENV 174
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + F K + N A + V A P+ S+
Sbjct: 175 FYDILVFFSPSGIQSLFENFPNFKQNDTRIAAFGNTTVKAAEEAGLKVDIQAPTPETPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALEK 240
>gi|261365625|ref|ZP_05978508.1| uroporphyrinogen-III synthase [Neisseria mucosa ATCC 25996]
gi|288565861|gb|EFC87421.1| uroporphyrinogen-III synthase [Neisseria mucosa ATCC 25996]
Length = 243
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 71/235 (30%), Gaps = 16/235 (6%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV--FLAMQQSYGAIAITSSESLS 61
+I RP +A + G+ ++ D ++ A+ S ++
Sbjct: 5 LIVRPSARAGDDVRTCSQAGWSARVLSPVEIEPDETALLGLKEQFSRADAVFWVSPTAVE 64
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T + A +AS ++ +F ++ + + A + + P
Sbjct: 65 TAAPYVDFSDDLKAQIAVGQASGRALQRCSAKNVFVPQEGNDSEAVLRLPVWDTLPPNAR 124
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ + G+ + L + + + + Y+ + ++ DA +
Sbjct: 125 VLIVRGRGGRDFLAESLKKKGFAVEIAEVYFRRPNELNWQDFDA--ESIDAAFITSGELA 182
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F+ P S + IA A+ + + V SL L
Sbjct: 183 RGLFAQVPPQFSRFFESLLYFTHHPRIADALREAGARHIRV-----VASLKAALS 232
>gi|254483230|ref|ZP_05096462.1| uroporphyrinogen-III synthase [marine gamma proteobacterium
HTCC2148]
gi|214036453|gb|EEB77128.1| uroporphyrinogen-III synthase [marine gamma proteobacterium
HTCC2148]
Length = 221
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 61/218 (27%), Gaps = 16/218 (7%)
Query: 31 LSYFIHDRESVFLAM-----QQSYGAIAITSSESLSTLPANFCRHTPIFAIGEAS----- 80
+ + +E Y + SS ++ + P G
Sbjct: 1 MLELVPLKELAAAQRQHVLDLDCYQHVIFISSNAVRFGLECIEDYWPQLPSGINWYAIGD 60
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
A + I+ ++ ++ + ++ + G + L + +
Sbjct: 61 ATARILEARGLSPLSPKEQISSEGLLALPELAQVAGQRVLIVKGTGGRKTLRETLHQREA 120
Query: 141 PLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYARSSVLYFFSLPLPAK----ISAAF 194
+ + CY ++ LL D ++ + + +L +
Sbjct: 121 RVDELACYRRVCPEMASGSLAELLFRKAVDVVMISSGEGLHNMLTLLSDKESTNFRDIGL 180
Query: 195 LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ S +A + N V A + ++L+ L R
Sbjct: 181 VVPSPRVAKLAQQAGFNDVVTAANASDAAMLQALQHWR 218
>gi|146329235|ref|YP_001209218.1| uroporphyrinogen-III synthase family protein HemD [Dichelobacter
nodosus VCS1703A]
gi|146232705|gb|ABQ13683.1| uroporphyrinogen-III synthase family protein HemD [Dichelobacter
nodosus VCS1703A]
Length = 251
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 68/238 (28%), Gaps = 20/238 (8%)
Query: 2 YIVITRPIK---KALRTQEKIQKMGYIPVMMPLS--YFIHDRESVFLAMQQSYGAIAITS 56
I+ TR + +A ++++G P +PL L + + S
Sbjct: 13 RILYTRSKQHWLQAEPL---LRQLGAQPYHLPLLDTKMQPLSAK-ALEQCRKADDLVFVS 68
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
++++ A + I Q ++ ++ PQ
Sbjct: 69 AQAVQHFLAQYQPVFQQNLIAIGMKTADALTAHAQTRFLVAPPPYNSEALLRIW---QPQ 125
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ I L + + ID Y + + + IL +
Sbjct: 126 RHKIALIAAEGGRDLLYTTLSEDNEVYRIDTYQRFNPTHAWNF---EMPLPHCILLASVQ 182
Query: 177 SVLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
++ +F ++ + A + LS I A + A + E L+ L
Sbjct: 183 TLAHFLAITPQNMLKLLQCRAVIVALSPRIMQAAVHAGFLHCISAQYADERHLISCLE 240
>gi|167580198|ref|ZP_02373072.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia thailandensis TXDOH]
Length = 659
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 67/253 (26%), Gaps = 35/253 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 11 VLTRPDGQSAALAAQLAAAGIDTLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 70
Query: 60 LS----TLPANFCRHTPIFAIGEASACLARQKGFTQIFH-------------GKDNSINL 102
+ L A + PI +G S + G H +S +L
Sbjct: 71 IDRALARLGAIWPHPLPIGVVGPGSVAALARHGVAVPAHRVIAPRAPDDGGEPHYDSESL 130
Query: 103 AKIIVEQKVLFTP--QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
I K ++ + G + L E + ++ Y T
Sbjct: 131 FAEIARAFDGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGTW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ I A
Sbjct: 191 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALRRAQFVAPHPRIVETARAL 250
Query: 209 YKNVVTVACFPKE 221
+ +T++ E
Sbjct: 251 GFDRITLSGAGDE 263
>gi|83720469|ref|YP_441429.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia thailandensis E264]
gi|167618304|ref|ZP_02386935.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia thailandensis Bt4]
gi|257139895|ref|ZP_05588157.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia thailandensis E264]
gi|83654294|gb|ABC38357.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX, putative [Burkholderia thailandensis E264]
Length = 659
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 67/253 (26%), Gaps = 35/253 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A +Y + S +
Sbjct: 11 VLTRPDGQSAALAAQLAAAGIDTLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNA 70
Query: 60 LS----TLPANFCRHTPIFAIGEASACLARQKGFTQIFH-------------GKDNSINL 102
+ L A + PI +G S + G H +S +L
Sbjct: 71 IDRALARLGAIWPHPLPIGVVGPGSVAALARHGVAVPAHRVIAPRAPDDGGEPHYDSESL 130
Query: 103 AKIIVEQKVLFTP--QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
I K ++ + G + L E + ++ Y T
Sbjct: 131 FAEIARAFDGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGTW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L F+ I A
Sbjct: 191 ERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALRRAQFVAPHPRIVETARAL 250
Query: 209 YKNVVTVACFPKE 221
+ +T++ E
Sbjct: 251 GFDRITLSGAGDE 263
>gi|330997185|ref|ZP_08321038.1| uroporphyrinogen-III synthase [Paraprevotella xylaniphila YIT
11841]
gi|329570980|gb|EGG52687.1| uroporphyrinogen-III synthase [Paraprevotella xylaniphila YIT
11841]
Length = 247
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 63/243 (25%), Gaps = 24/243 (9%)
Query: 2 YIVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIA 53
I++++P + K G V P F Y A+
Sbjct: 4 KILVSQPKPTSEKSPYFEIASK---YGVEVVFRPFIKIEGLSAKEFRQQKVSILDYTAVV 60
Query: 54 ITSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
TS ++ F I E A ++ + S +
Sbjct: 61 FTSRNAIDHFFLLCKELRVTIPEDMKYFCITETIALYIQKYVQYRKRKVFFGSTGKVDDL 120
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ V + + N + L K+ + + Y + + +
Sbjct: 121 IPAMVK-HKTEKYLVPLSDVHNDEITNLLDAKKLIHKEVVMYRTV----SNDFKSDEKFD 175
Query: 167 ADAILFYARSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F++ S + + + A A+ + + A + S+
Sbjct: 176 YDMLIFFSPSGIQALLKNFPKFEQKDIAIGTFGPATAQAVKDAGLRLDMEAPTSQYPSIT 235
Query: 226 KLL 228
L
Sbjct: 236 AAL 238
>gi|327439434|dbj|BAK15799.1| uroporphyrinogen-III synthase [Solibacillus silvestris StLB046]
Length = 247
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 61/221 (27%), Gaps = 9/221 (4%)
Query: 17 EKIQKMGYIPVMMPLSYFI---HDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPI 73
+ I++ PL + + +L Q+Y + TS ++ + RH
Sbjct: 24 QLIEQHHGKVYNYPLIETVEKISMEDKFYLQELQAYHWLIFTSQNAVKSFVDKCIRHEQT 83
Query: 74 FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFED 133
A + + HG + V +
Sbjct: 84 IPATMKIAAVGEKTAALLKGHGYKIHFM--PTVYSADVFVKEFSMMPGERALFIRGSKAK 141
Query: 134 YLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPA--K 189
I Y ++ + + L + ++F + S+V + +P
Sbjct: 142 KTIHEGTGADEWIVYETRPCSIYFAQLTQCLLTEKQPIVIFASPSAVDIYAEHIVPHVAW 201
Query: 190 ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ F + + +A+ + ++++ L L
Sbjct: 202 QNVKFASIGHVTTAALEKHGVQPMVQPKIYTMQAVIEQLIL 242
>gi|110669323|ref|YP_659134.1| uroporphyrinogen-III synthase [Haloquadratum walsbyi DSM 16790]
gi|109627070|emb|CAJ53549.1| uroporphyrinogen-III synthase [Haloquadratum walsbyi DSM 16790]
Length = 261
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 64/225 (28%), Gaps = 16/225 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYG-AIAITSSESLSTLPANFCRHT--P 72
E +++ G P+ P+ + + +TS + L T
Sbjct: 5 VELLEEYGITPIPDPMLSVEPTGTIPEIDTVSDASPFVVLTSKTGVEILADAGWNPTVAT 64
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
+ IG +A AR G+T + S +V+ + +I +
Sbjct: 65 LVCIGPRTAAAARDVGWTVDIIPTEYSSQG---LVDALADQVTDRSVIIARSDHGSETLI 121
Query: 133 DYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI- 190
D L + Y ++T+ DA+ F + +V +F S ++
Sbjct: 122 DGLDAAGAAVTETVLYKLVRPDGTGQSTVMAAGNELDAVCFTSSLTVEHFLSAAANRELR 181
Query: 191 --------SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+A + A V L++
Sbjct: 182 EETIMGLNNAVVGTIGEPTRETAQAHGVRVDVTPADATFEHLVEA 226
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
++ +++ V A +C+ A+A V + L+ L
Sbjct: 42 VVLTSKTGVEILAD-AGWNPTVATLVCIGPRTAAAARDVGWTVDIIPTEYSSQGLVDALA 100
>gi|294010303|ref|YP_003543763.1| uroporphyrinogen-III synthase [Sphingobium japonicum UT26S]
gi|292673633|dbj|BAI95151.1| uroporphyrinogen-III synthase [Sphingobium japonicum UT26S]
Length = 222
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 76/235 (32%), Gaps = 20/235 (8%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +VI RP A +T + + G + PL + + A+ +TS+ +
Sbjct: 1 MRPVVILRPEPGAGKTAARAAERGLEARVFPLFAPRALEWHA--PAPERFDALLLTSANA 58
Query: 60 LSTLPANFCRHTPIFAIG--EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
R+ + A A+A + GF + G + +A+ I
Sbjct: 59 ARLAGEGLARYRKLPAYAVGRATAKALEEAGFADVVVGDGDGTAVARRIAA-----DGHG 113
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+++L G+ L + I Y E L+ +L ++ +
Sbjct: 114 HVLHLAGRTVAPIDAGAL-----RIDRIAVYEMLRT--GEEGWAERLEAGSVLLVHSPRA 166
Query: 178 VLYFFSLPLPAKISA-AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
P + S+ + +S A A + P + +L L +R
Sbjct: 167 GELLARHVGPERRSSFHLIAISPA-ALAACGAGWASAQAPDKPDDERML-ALAVR 219
>gi|268324195|emb|CBH37783.1| putative uroporphyrinogen-III synthase [uncultured archaeon]
Length = 257
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 74/248 (29%), Gaps = 25/248 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIAITSSE 58
I + RP +T+E + G+ PL + ++++ + TS
Sbjct: 6 KIAVFRPENVLKKTKEIADRYGFDFFGFPLFELVVRKDALAEIEAVFGEGADIAVFTSIN 65
Query: 59 SLSTLPANFCRHTP-----------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + AIG A+ KG + S + K +
Sbjct: 66 GVKKAFGICNGKFDLKKKFQDDNVVVCAIGPATKAELANKGLHVHIMPAEYSSDGLKSV- 124
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI---AYPETTMKNLL 164
+ +++L + +L + I Y ++I E + +
Sbjct: 125 -FDAIEVKGTRIVFLRSSEGDKDIITFLDAKGAFVNDIAIYSVREIALAECEELFNELVW 183
Query: 165 QNADAILFYARSSVLYFFSLPLPAKI------SAAFLCLSNNIASAIPASYKNVVTVACF 218
D ++F + + F I +A + + + A I NV VA
Sbjct: 184 YGPDYVIFTSSLTFRIFLKHTKELNITEKVFENAKIVAIGDPTAETIKEEGLNVDLVAQK 243
Query: 219 PKETSLLK 226
LLK
Sbjct: 244 STIEDLLK 251
>gi|305666152|ref|YP_003862439.1| putative uroporphyrinogen-III synthase [Maribacter sp. HTCC2170]
gi|88707650|gb|EAQ99891.1| possible uroporphyrinogen-III synthase [Maribacter sp. HTCC2170]
Length = 248
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 63/246 (25%), Gaps = 22/246 (8%)
Query: 1 MYI---VITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAI 52
M I ++++P + I K P + +Y AI
Sbjct: 1 MKIKTILVSQPEPKMENSPYSRLIDKEKVKVDFRPFIHVEGVDAKAVRQQKIDLHNYTAI 60
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ F EA A ++ + N +
Sbjct: 61 ILTSRNAVDHFFRIADEMRFKVPDSMKYFCQSEAVAYYLQKYVVYRKRKIYVGKRNFNDL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ K ++ + + L E + Y + +
Sbjct: 121 VPLFKKY--KEEKFLLPSADVLKQEVPEKLDELDVEWTRGIFYKTVISDLSD----LRDV 174
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + + + N+ +A + + A P S+
Sbjct: 175 YYDVLVFFSPSGIESLLKNFPDFEQNDTRIAVFGNSTVAAATGAGLRIDIKAPTPDTPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALQK 240
>gi|33601069|ref|NP_888629.1| putative uroporphyrinogen-III synthase [Bordetella bronchiseptica
RB50]
gi|33575504|emb|CAE32582.1| putative uroporphyrinogen-III synthase [Bordetella bronchiseptica
RB50]
Length = 274
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 54/230 (23%), Gaps = 25/230 (10%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD-RESVFLAMQQSYGAIAITSSESLST 62
++TRP + +++ + G+ + +P E+ + + + Y + S +
Sbjct: 18 ILTRPQGRNGALAQRLHEAGWQTLCLPALRIEPLPPENGAVPLPRDYDLVVFVSGNAARL 77
Query: 63 LPANFCRHTPIFAIGEASACL--------------ARQKGFTQIFHGKDNSINLAKIIVE 108
+ A A + + +
Sbjct: 78 YLEQLGERGQLPWPAGAVAATVGPASARALLDSGQFGADTTVLHPAETAPTHDSEALWSL 137
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-----TMKNL 163
+ + + + G D L + + Y + + +
Sbjct: 138 LRARPALPRRALLVRGTQGRDWLADRLAAAGVEVSRHAVYRRRPAPWAQEGRQRLRDWAR 197
Query: 164 LQNADAILFYARSSVLYFF-----SLPLPAKISAAFLCLSNNIASAIPAS 208
L + + L + F+ +A + A
Sbjct: 198 AGERPTWLLTSGEGIDALVQGLREEQLLDWWLQGRFVVTHPVLAERLRAL 247
>gi|308177930|ref|YP_003917336.1| uroporphyrinogen-III synthase [Arthrobacter arilaitensis Re117]
gi|307745393|emb|CBT76365.1| putative uroporphyrinogen-III synthase [Arthrobacter arilaitensis
Re117]
Length = 263
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/253 (13%), Positives = 76/253 (30%), Gaps = 32/253 (12%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITSS 57
+I R +A T ++ ++G L + + L +Y + TS
Sbjct: 6 LILRNPARAAATVQEFDQLGITSWCAQLIETVWPADRSSLQRMASELVAGAYSWLVFTSV 65
Query: 58 ESLSTLPA-----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ + + ++GE + ++ + + + A ++
Sbjct: 66 NTVKVVQQVLDGQPLPEPLRLASVGEKTTEAI-ERYLGRSVDFEAEEQSAAGMLAAWVPE 124
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP---------------- 156
P + Y G + D L ++ + + Y + D
Sbjct: 125 --PGARICYPHGDLASSTLADGLGKYPVQVNEFIVYETVDAPADGTPVSEPEAVPGLNVL 182
Query: 157 -ETTMKNLLQNADAILFYARSSVLYFFSLPLPAK-ISAAFLCLSNNIASAIPASYKNVVT 214
+ + L+ D ++F A S V F L + + A A+ + V
Sbjct: 183 PANRIGDRLEEQDLVVFSAPSVVRRFVQLAGTQLPEKLQTIAIGRPTARAMERAGLPVHA 242
Query: 215 VACFPKETSLLKL 227
VA P L +
Sbjct: 243 VASAPTPQGLARA 255
>gi|320451227|ref|YP_004203323.1| uroporphyrinogen-III synthase [Thermus scotoductus SA-01]
gi|320151396|gb|ADW22774.1| uroporphyrinogen-III synthase [Thermus scotoductus SA-01]
Length = 212
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 70/220 (31%), Gaps = 16/220 (7%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSS----ESLSTLPANFCRH 70
++++ +G + L + L +A+TS L
Sbjct: 1 MDRLRALGIEAAEVALLEQVDLPGLEVLPGKLLQADWVAVTSKEGARRLLWAWEKAGRPL 60
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
+ A+GE + + RQ G + F + F P + ++++ G
Sbjct: 61 LKVAAVGEGTGEVLRQGGLSPAFVPPRATAKDLA------ATFPPAQRVLFVAGDLAGKD 114
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI 190
E+ L + + ++ Y +++ + LL+ A + F++ S+ +
Sbjct: 115 LEEGLGARMVEVERVEVYATRERELSPEEL-ALLERAQVVAFFSPSAARAY---ARKTPR 170
Query: 191 SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
C+ + + V A P L + +
Sbjct: 171 RPKAACIGPSTGEEARRLGFS-VWEAAEPGLEGLFQAILR 209
>gi|260429611|ref|ZP_05783588.1| uroporphyrinogen-III synthase [Citreicella sp. SE45]
gi|260420234|gb|EEX13487.1| uroporphyrinogen-III synthase [Citreicella sp. SE45]
Length = 248
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 74/229 (32%), Gaps = 12/229 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYI---PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++TRP + R ++ G ++ PL + L + TS+
Sbjct: 8 LLLTRPDAASRRFASDLEAEGLTGTRVIISPLIRI---SVNGPLPEMSDIRGVIFTSANG 64
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
LS+ P+ + A + + N+ L ++I P PL
Sbjct: 65 LSSYRGLGGAVLPLCYTVGDATAAAARAAGFSPRSARGNADALVQLIT----REAPAGPL 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSV 178
++L G+ L IP R + Y L +A I+ ++ S
Sbjct: 121 LHLRGRHGKGEVAARLTAAGIPTREAELYDQPAQELSAAAKAVLDGDAPVIVPLFSPRSA 180
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F + +S ++A+A+ Y + + + P +
Sbjct: 181 AQFAQAVQ-GRAPLFVAAMSGDVAAALGGLYVSRLEIPKHPDAAHMRSA 228
>gi|268679236|ref|YP_003303667.1| uroporphyrinogen III synthase HEM4 [Sulfurospirillum deleyianum DSM
6946]
gi|268617267|gb|ACZ11632.1| Uroporphyrinogen III synthase HEM4 [Sulfurospirillum deleyianum DSM
6946]
Length = 214
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 57/207 (27%), Gaps = 13/207 (6%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLA 84
V +PL + ++Y AI TS S+ L A
Sbjct: 18 EVVHLPLFEICYT---QAFVDIEAYDAIVFTSKNSVKALERLGVAWQTKAAYAIGEGTAQ 74
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+ N + E+ + K + + K + L + I +
Sbjct: 75 TIMHYGGNLLFTCNHSY-GDLFAEELIPLLQGKRVFFPRAKEVISPLFEILTKAGITISQ 133
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
Y + Y + ++F + S+V F S + + A+
Sbjct: 134 SVMYETVCKTYDASLTP---PPKAILIFTSPSTVHCFLKNF-SWDASYRVVVIGTKTAAV 189
Query: 205 IPASYKNVVTVACFPKETS---LLKLL 228
+P K V+ A L K L
Sbjct: 190 LPLHVKPVI--AEIQTIEHCITLAKAL 214
>gi|120434476|ref|YP_860176.1| uroporphyrinogen-III synthase [Gramella forsetii KT0803]
gi|117576626|emb|CAL65095.1| uroporphyrinogen-III synthase [Gramella forsetii KT0803]
Length = 248
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 61/244 (25%), Gaps = 22/244 (9%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAI 52
M I++++P + E +K +P + Y AI
Sbjct: 1 MKVKTILVSQPEPKVENSPYFELEEKQKVKIDFIPFIHVEGVPSKEVRQQKIDLSDYSAI 60
Query: 53 AITSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ F + EA A ++ + A++
Sbjct: 61 ILTSRNAVDHFFRIAEEMRYKVPDSLKYFCLSEAVAYYLQKYVVYRKRKIYVGKRTFAEL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
K + + L + + + Y +
Sbjct: 121 APLIKKY--KNEKFLLPSSDMLKPDVPKTLNKLGVEWKKAVFYRTVVSDLS----HLKDV 174
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + F K + N A A P+ S+
Sbjct: 175 TYDILVFFSPSGIKSLFENFPDFKQNDTRIAVFGNTTIKAAKEHGLVCNIKAPTPETPSM 234
Query: 225 LKLL 228
+
Sbjct: 235 TMAI 238
>gi|332878126|ref|ZP_08445855.1| uroporphyrinogen-III synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332683864|gb|EGJ56732.1| uroporphyrinogen-III synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 221
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 81/231 (35%), Gaps = 21/231 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I+ T+ + A + +++Q +G+ V ++ L Y + TS +
Sbjct: 1 MKILSTKCLTSAQQ--QRLQALGFTLVQHNFIATPPLPFALSLP----YEWLIFTSQNGV 54
Query: 61 STLPANFCRH----TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
++ A+ TP+ +G + L + K F + + +A + +
Sbjct: 55 QSVLAHPQWQELLSTPVLCVGVKTQQLLQSKRFKVCYAADYATDLVAYM--RNDLSRYQG 112
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ + G R D+ K+ + I Y + L + DAILF++ S
Sbjct: 113 GRIAFFAGMHRLNTLPDFFASEKLQVAEITVYDTVFTP------ITLAEPVDAILFFSPS 166
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
V + S A C+ A A V VA P +L+
Sbjct: 167 GVQSYLSTHTTAAEQ--VYCIGTTTAQAATPH-WASVIVATEPTVDGVLQA 214
>gi|91090027|ref|XP_967605.1| PREDICTED: similar to uroporphyrinogen iii synthase [Tribolium
castaneum]
gi|270013699|gb|EFA10147.1| hypothetical protein TcasGA2_TC012334 [Tribolium castaneum]
Length = 250
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 74/244 (30%), Gaps = 20/244 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSES 59
+++ + + + +Q + + + F + ++ L Y I ++S
Sbjct: 8 VLLLKSDTTDDKYTKLLQARNFKVMAVKTLVFEYKNAAILREKLLSADKYSGILLSSPRC 67
Query: 60 LSTL---------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+S + + + + G N+ NLA++I++ K
Sbjct: 68 VSAVSQALEKRLVQELWGPKSNYTVGESTYKEALDKLGVECQGKESGNAKNLAQLIIQSK 127
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-- 168
F KP ++ G + + L + + + Y + + N
Sbjct: 128 AQF--TKPFLFPHGNLKTDTLKLELGRENLQIEGVLVYDTLPNPDIAQELSECTNNFTDI 185
Query: 169 --AILFYARSSVLYFFSLPLPAKIS--AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+++++ S + + + A+ V VA P +
Sbjct: 186 PEFVIYFSPSGLHSSIEYLRKLLTDRGVKIIAIGPVTELALQDLNLTVHAVAKSPTPEEV 245
Query: 225 LKLL 228
+K L
Sbjct: 246 IKTL 249
>gi|114765152|ref|ZP_01444296.1| hypothetical protein 1100011001332_R2601_15060 [Pelagibaca
bermudensis HTCC2601]
gi|114542427|gb|EAU45454.1| hypothetical protein R2601_15060 [Roseovarius sp. HTCC2601]
Length = 248
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 71/229 (31%), Gaps = 12/229 (5%)
Query: 3 IVITRPIKKALRTQEKIQKM---GYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++TRP + + ++ G+ ++ PL + L + G TS+
Sbjct: 8 LLLTRPKAASRQFLTALEDAGLSGFRTIVSPLIGIE---VTGPLPDLEGVGGAIFTSANG 64
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ P+ + A +K ++ L +I+++ L
Sbjct: 65 VRAYEKLGGPVLPLCFTVGDATAEAARKAGFAPKSAGGDAAALVGLIIKEAPGVP----L 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSV 178
++ G + L + R Y L +A I+ ++ S
Sbjct: 121 VHFRGTHARGAVAERLRGAGLSAREAVIYDQPAQELSAGAKAALQGDAPVIVPLFSPRSA 180
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F +S ++A+A+ A Y + + P + +
Sbjct: 181 AQFAGGAR-GGAPLIVAAMSRDVAAALEALYVTRLEILAQPDAIGMRRA 228
>gi|228473443|ref|ZP_04058196.1| uroporphyrinogen-III synthase [Capnocytophaga gingivalis ATCC
33624]
gi|228275050|gb|EEK13853.1| uroporphyrinogen-III synthase [Capnocytophaga gingivalis ATCC
33624]
Length = 222
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 63/211 (29%), Gaps = 14/211 (6%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFA 75
E +G+ +PL TS +L L + +
Sbjct: 15 VEAFAALGFQVESLPLIRVQLSETIEAFPQA---DFAIFTSGNALEALQKHPAAKA-LAP 70
Query: 76 IGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYL 135
++ S A+ + V ++ G+ R L
Sbjct: 71 HRAFCVGAKTRERLESAGWEVIASFGYAQQLANYLVEQYASYSFVFFCGESRMETLPKVL 130
Query: 136 IEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL 195
+ IP Y ++ K L ++ D +LF++ S+V F L +
Sbjct: 131 AKRGIPCHECLTYTTELTP------KKLSKHYDGLLFFSPSAVRSF--LAANSFAEEKIF 182
Query: 196 CLSNNIASAIPASYKNVVTVACFPKETSLLK 226
C+ + SA+P + +A P +++
Sbjct: 183 CIGSTTQSALPE-GVSS-YIAQSPTLEGMME 211
>gi|168071084|ref|XP_001787048.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162659843|gb|EDQ48138.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES-------VFLAMQQSYGAIAI 54
I++TR +A +I+++G P P+ ++ Y +
Sbjct: 255 RILVTRSRAQASDLVNRIEELGGEPYEFPVIETVYPEAPELKQGLKDAFDRLGEYDWVFF 314
Query: 55 TSSESLSTLPANFCRHTP 72
TS+ + +
Sbjct: 315 TSTNGVDYFFRHLKEQGK 332
>gi|222151550|ref|YP_002560706.1| hypothetical protein MCCL_1303 [Macrococcus caseolyticus JCSC5402]
gi|222120675|dbj|BAH18010.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 222
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 63/212 (29%), Gaps = 12/212 (5%)
Query: 23 GYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC--RHTPIFAIGEAS 80
G + PL + Y + TS +++ + ++ I AIG +
Sbjct: 17 GLTVLHKPLIKICALPLDETIR--AQYDWLIFTSKNAVTLFFEMYPYIKYKQIAAIGTKT 74
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
+ + +E K + K +++
Sbjct: 75 EEALSNLNIKVDYVPSRFQQ---EYFLEDMDTRFQDKTICLPVSKKARPLM-FETLKNIA 130
Query: 141 PLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPAKISAAFLCLS 198
+ I+ Y Q + ++ +N D ILF + SSV +F + + +
Sbjct: 131 IVDKIELYEPQPHLDNVMCVHQMIRSRNIDWILFLSPSSVHAYFQYFSLS-EDIRVMAIG 189
Query: 199 NNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ A+ V ++ ++ + +
Sbjct: 190 QVTSEALQKYNVPHV-ISEQETLYAMYETIKK 220
>gi|254251706|ref|ZP_04945024.1| hypothetical protein BDAG_00902 [Burkholderia dolosa AUO158]
gi|124894315|gb|EAY68195.1| hypothetical protein BDAG_00902 [Burkholderia dolosa AUO158]
Length = 656
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/259 (11%), Positives = 61/259 (23%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ + G + PL LA Y + S +
Sbjct: 11 VLTRPDGQSAGLAAQLAEAGCDVLEFPLIDIAPVDDPAPLDAALAALADYALVIFVSPNA 70
Query: 60 LSTLPANFCRHTPI-------------------FAIGEASACLARQKGFTQIFHGKDNSI 100
+ A + P A + S+
Sbjct: 71 IERALARYDAIWPNALPIGVVGPGSVAALERHGIAAPAHRVIAPHAPTDGGVPRYDSESL 130
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+ K ++ + G + L E + ++ Y
Sbjct: 131 FASIEAAFGGAAALAGKRVLIVRGDGGREWLAERLREAGADITLVAAYRRVVPEPRIGAW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPAS 208
+ + A L + V L A A + I A
Sbjct: 191 ERVHALLGGEPHAWLVTSSEGVRNLHELARTHLNGAEIDALKHAPLVTPHARIEQTARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|299535619|ref|ZP_07048940.1| uroporphyrinogen-III synthase [Lysinibacillus fusiformis ZC1]
gi|298728819|gb|EFI69373.1| uroporphyrinogen-III synthase [Lysinibacillus fusiformis ZC1]
Length = 253
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 76/226 (33%), Gaps = 20/226 (8%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHD---RESVFLAMQQSYGAIAITSSESLSTLPANFCRHT- 71
E I +G ++ PL ++S L + Y + TS ++ + RH
Sbjct: 24 VENITALGGQAIVAPLIETCERLDSKDSELLNRVKQYDWLIFTSQNAVEAFASKMHRHQF 83
Query: 72 -------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGG 124
I +IG + GF F S ++ + E + +++ G
Sbjct: 84 NANHFQGKIASIGTKTTTALENLGFQVSFMPSIFSADI--FVKEFPSVAGNHPRCLFIRG 141
Query: 125 KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSVLYFF 182
+ +D L L+ Y + + + + N +Q ++F + S+V +
Sbjct: 142 EKAKSTLKDGLP---FELKEWTVYETIERHDQTSVIVNCIQQHQDVTVIFASPSAVDVYA 198
Query: 183 SLPLPA--KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+P + + + +A+ V + ++++
Sbjct: 199 MEVVPHIGWEAVHIAAIGHITEAALEQYGATVDIMPSVYTMQAVIE 244
>gi|158334561|ref|YP_001515733.1| uroporphyrinogen-III synthase [Acaryochloris marina MBIC11017]
gi|158304802|gb|ABW26419.1| uroporphyrinogen-III synthase [Acaryochloris marina MBIC11017]
Length = 287
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 69/239 (28%), Gaps = 23/239 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
IVIT P A R I + G +P++MP L + + +A TS
Sbjct: 17 RIVITAPRPYAGRLATAIIQQGGLPIVMPTIETYALDPAPDLDHALQQLRDFSWVAFTSR 76
Query: 58 ESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + I AIG+ + L + + + L + +
Sbjct: 77 TGIQAVMLRLQQLDIPLFLLNQCHICAIGQDADQLQTLGVRVDLIPKESSPAGLVAELAQ 136
Query: 109 QKVLF-----TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE---TTM 160
+ P + + F L + + + + Y ++ +
Sbjct: 137 IPDIDTRRIFVPIPQVERIPEPDIVPKFLADLEQLGLTVVSVPAYVTRRLEATAYAVEVE 196
Query: 161 KNLLQNADAILFYARSSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVAC 217
+ DAI F + + + + + C A +V V+
Sbjct: 197 QIRQGKVDAIAFSSTAEISALLQMVDAETLMKHCVIACFGPYTAGNAKDLGLSVDIVSQ 255
>gi|33597223|ref|NP_884866.1| putative uroporphyrinogen-III synthase [Bordetella parapertussis
12822]
gi|33573650|emb|CAE37935.1| putative uroporphyrinogen-III synthase [Bordetella parapertussis]
Length = 274
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 54/230 (23%), Gaps = 25/230 (10%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD-RESVFLAMQQSYGAIAITSSESLST 62
++TRP + +++ + G+ + +P E+ + + + Y + S +
Sbjct: 18 ILTRPQGRNGALAQRLHEAGWQTLCLPALRIEPLPPENGAVPLPRDYDLVVFVSGNAARL 77
Query: 63 LPANFCRHTPIFAIGEASACL--------------ARQKGFTQIFHGKDNSINLAKIIVE 108
+ A A + + +
Sbjct: 78 YLEQLGERGQLPWPAGAVAATVGPASARALLDSGQFGADTTVLHPAETALTHDSEALWAL 137
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-----TMKNL 163
+ + + + G D L + + Y + + +
Sbjct: 138 LRARPALPRRALLVRGTQGRDWLADRLAAAGVEVSRHAVYRRRPAPWAQEGRQRLRDWAR 197
Query: 164 LQNADAILFYARSSVLYFF-----SLPLPAKISAAFLCLSNNIASAIPAS 208
L + + L + F+ +A + A
Sbjct: 198 AGERPTWLLTSGEGIDALVQGLREEQLLDWWLQGRFVVTHPVLAERLRAL 247
>gi|289705145|ref|ZP_06501549.1| uroporphyrinogen-III synthase [Micrococcus luteus SK58]
gi|289558173|gb|EFD51460.1| uroporphyrinogen-III synthase [Micrococcus luteus SK58]
Length = 279
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/277 (11%), Positives = 65/277 (23%), Gaps = 51/277 (18%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPV-------MMPLSYFIHDRESVFLAMQ------- 46
M +++TR +A + + G +PL+ F + L
Sbjct: 1 MRVLLTRQPAQAGDLEAGL--AGAEVAGRRLRVGFLPLTDFALPDDDGPLRALLADWAGT 58
Query: 47 ----------QSYGAIAITSSESLSTLPANFCRHT-----PIFAIGEASACLARQKGFTQ 91
+ +TS ++ L A I A G +A + + G
Sbjct: 59 DGDAAGPVRSDGSRWLVLTSPNTVRALRAVGWDGHVPASARIAATGPGTARVLTEAGCDA 118
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ +I L D L +R Y +
Sbjct: 119 APWLPPEDRSAEGLIAGLAALHPRGARAWLPQSDRARPRLADGLRAAGWDVRTGLAYRTV 178
Query: 152 DIAYPE------------------TTMKNLLQNADAILFYARSSVLYFFS--LPLPAKIS 191
++ A++ + S+ F + L
Sbjct: 179 PYPAQAGRRLLDGAADEDRGDVVTPARLAVVAAGTAVVLTSSSAAEEFVAAGLRPLVGER 238
Query: 192 AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + ++ A P +L +L
Sbjct: 239 VRLVAIGAPTRDTCARRGLPLLGTAPTPDAAGVLAVL 275
>gi|146278945|ref|YP_001169104.1| uroporphyrinogen III synthase HEM4 [Rhodobacter sphaeroides ATCC
17025]
gi|145557186|gb|ABP71799.1| Uroporphyrinogen III synthase HEM4 [Rhodobacter sphaeroides ATCC
17025]
Length = 247
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 60/230 (26%), Gaps = 10/230 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIP--VMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+++TRP + R +++ V PL + L A+ TS +
Sbjct: 12 VLLTRPEAQGARFAVALREALGPVRLVTSPLMVPEFLSPPIALRP----EALIFTSETGV 67
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ + ++ A+ ++ PL+
Sbjct: 68 EGFRRLAAPGLAGVGRAWCVGNRTARAARAAGLDAQ-SAEGDAEALIAAIAAAGESGPLL 126
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSVL 179
+L G L + Y + + L A + ++ +
Sbjct: 127 HLRGAESRGEVAPRLAAQGLVAEEAVVYDQRPQPLLPEALALLAGGAPVLAPLFSPRTAR 186
Query: 180 YF-FSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
L +S +A A A + VA P +LL
Sbjct: 187 LLGLELARAGVAPQLWVAAMSPAVAEAAGALSPARLRVAARPDAEALLDA 236
>gi|150003756|ref|YP_001298500.1| uroporphyrinogen-III synthase [Bacteroides vulgatus ATCC 8482]
gi|254881015|ref|ZP_05253725.1| uroporphyrinogen-III synthase [Bacteroides sp. 4_3_47FAA]
gi|294777425|ref|ZP_06742876.1| uroporphyrinogen-III synthase [Bacteroides vulgatus PC510]
gi|149932180|gb|ABR38878.1| possible uroporphyrinogen-III synthase [Bacteroides vulgatus ATCC
8482]
gi|254833808|gb|EET14117.1| uroporphyrinogen-III synthase [Bacteroides sp. 4_3_47FAA]
gi|294448493|gb|EFG17042.1| uroporphyrinogen-III synthase [Bacteroides vulgatus PC510]
Length = 249
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 16/239 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPTSEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKVSILDHTAVIFTS 64
Query: 57 SESLSTLPANFC------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ T + + L QK +
Sbjct: 65 RHAIDHFFNLCTELRVTVPETMKYFCTSETIALYIQKYVQYRKRKVFFGATGKFADLVPS 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++ + + N + L ++KI + Y + + + D +
Sbjct: 125 IVKHNTEKYLVPMSDVHNDEIKTLLDKNKIQHTEVVMYRTVSNDFTPEE----EFDYDML 180
Query: 171 LFYARSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
LF++ + + + C A A+ + + A + S+ L
Sbjct: 181 LFFSPAGINSLMKNFPEFDQKEIAIGCFGPATAKAVKDAGLRLDLEAPTVEAPSMTAAL 239
>gi|149277116|ref|ZP_01883258.1| uroporphyrinogen-III synthase [Pedobacter sp. BAL39]
gi|149231993|gb|EDM37370.1| uroporphyrinogen-III synthase [Pedobacter sp. BAL39]
Length = 256
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 67/243 (27%), Gaps = 25/243 (10%)
Query: 3 IVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I+IT P + +K + F + A+
Sbjct: 15 ILITLPKPETEKSPYFDLAKK---YNLKIDFRSFIHVEGVPARDFRKDKINLGDFTAVVF 71
Query: 55 TSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ F I E++A ++ + A +
Sbjct: 72 TSRNAVDHFFRICEEMRHDVPAELKYFCISESTALYLQKYIQYRKRKIFFGKQTAADL-- 129
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + + +Y ++L ++ + + + + + +
Sbjct: 130 AEVLKKHASEKFLYPCSDVATEDTMNFLQKNGYDFTPAVLFRTVVSDLSD--LAEVFYD- 186
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
I F++ SS+ F+ K + N A+ + V A P+ S++
Sbjct: 187 -IIGFFSPSSIQSLFTNFPDFKQNNTRIAAFGVNTHKAVKDAGLIVDIAAPSPEAPSMIM 245
Query: 227 LLP 229
+
Sbjct: 246 AIE 248
>gi|255693349|ref|ZP_05417024.1| uroporphyrinogen-III synthase [Bacteroides finegoldii DSM 17565]
gi|260620926|gb|EEX43797.1| uroporphyrinogen-III synthase [Bacteroides finegoldii DSM 17565]
Length = 248
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 65/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKISILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + + ++
Sbjct: 65 RHAIDHFFNLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLIPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + N ++ L ++ I Y + + + D
Sbjct: 125 IVK-HKTEKYFVPMSDVHNDDVKNLLDKNGIQHTEAVMYRTVSNDFTPDE----DFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGVTSLKKNFPDFNQKEIKIGTFGSTTAQAVRDAGLRLDLEAPTVQAPSMTAAL 239
>gi|323343533|ref|ZP_08083760.1| uroporphyrinogen-III synthase [Prevotella oralis ATCC 33269]
gi|323095352|gb|EFZ37926.1| uroporphyrinogen-III synthase [Prevotella oralis ATCC 33269]
Length = 249
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 60/242 (24%), Gaps = 18/242 (7%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAI 54
I++++P + + E ++ G V P F Y A+
Sbjct: 4 KILVSQPQPASDKSPYYDIE--REYGVECVFRPFFRVEGLTAKEFRQQRINILDYTAVVF 61
Query: 55 TSSESLSTLP------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
TS ++ + + L QK +
Sbjct: 62 TSRHAIDHFFTLAKELRITIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGSTGKIADLI 121
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ + + N L K+ Y + + E +KN + D
Sbjct: 122 PIMAKHKNEKYLVPMSSVHNDDVRLLLEAKKLQHTECVMYRTVSNDFTEDEIKNF--DYD 179
Query: 169 AILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+LF++ + V + A + + A + S+
Sbjct: 180 MVLFFSPTGVKALQKNFPDFEQGDIRIGAFGPATAKTVEDEGLRLDLQAPSNEFPSMTSA 239
Query: 228 LP 229
L
Sbjct: 240 LK 241
>gi|85711586|ref|ZP_01042644.1| Uroporphyrinogen-III synthase [Idiomarina baltica OS145]
gi|85694738|gb|EAQ32678.1| Uroporphyrinogen-III synthase [Idiomarina baltica OS145]
Length = 241
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/235 (10%), Positives = 64/235 (27%), Gaps = 9/235 (3%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
+I +P R + + + Y + S ++
Sbjct: 8 LILQPDDSRQRIIGALSESAIQFTQHSFIDIEPISVKPLVNP--DYDGVIWISKNAVKFA 65
Query: 64 PANFCRHTPIFAIG--EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
R P ++ + F + + ++ +++ + +
Sbjct: 66 ADAGFRFLPQTSMFAVGPTTARLAANTFGISAYCPTYKHDSESLLTLPEMVNVDNQKWLI 125
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-TMKNLLQNADAILFYARSSVLY 180
+ G+ D L + ID Y + + + + I+ + + Y
Sbjct: 126 IKGEKGRDLLFDTLRARGATVSSIDVYRRVKRPLNDETQVTQWMNTVNLIVVTSAEQLGY 185
Query: 181 FFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
F S ++ S + IP + +TV E+ +++ +
Sbjct: 186 FLSSLPREAGGWLSRCDWIVPSERLRDLIPFVAADTITVTGSATESKMIEAIIKH 240
>gi|291525404|emb|CBK90991.1| uroporphyrin-III C-methyltransferase [Eubacterium rectale DSM
17629]
Length = 495
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/231 (12%), Positives = 64/231 (27%), Gaps = 12/231 (5%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP 64
IT P K K+Q++G + F +S I TS + +
Sbjct: 258 ITVPYIKTNELIAKLQQLGADVTPVKTGIINPIIIPEFADKVRSADWIVFTSKNGVRSFF 317
Query: 65 ANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
N + +G+A+ + + + + +
Sbjct: 318 YNLDLAGADIRLIANARFAVVGKATEKELAKHHINADIIPAEQTGKGLAGELSSYMGDND 377
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ + K + E L E ++ Q ++ N++ +F +
Sbjct: 378 EIKVCIFSAKEASPDLEAGLKEICELEKIDAYVNEQAYESITESIGNMVSE---AVFTSA 434
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+V FF + + +A+ + A +L+
Sbjct: 435 SNVERFFHMLPENAYVETAYSIGEKTTAALEQHNVREIVQADDSSYEALVD 485
>gi|288574446|ref|ZP_06392803.1| uroporphyrin-III C-methyltransferase [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570187|gb|EFC91744.1| uroporphyrin-III C-methyltransferase [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 485
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 74/239 (30%), Gaps = 11/239 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I I RP ++ +T ++ +G +PL ++ + + +TS +S
Sbjct: 248 IGIVRPAPESWKTARILENLGADCYSLPLVNLRKLEKNWNEEAIGNSNWLVLTSPRGVSL 307
Query: 63 LPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
L I +IG ++ G + + VE+ V + + +
Sbjct: 308 LSEVTDLRKIGGRIISIGPGTSKALYDIGIHPDLEAEIPTSEGLADTVEKHVSYG--QSI 365
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM---KNLLQNADAILFYARS 176
++ + + + Y + P + D ++F + +
Sbjct: 366 LFFRNERASDLPVQAARRVGATVLTSSAYRMERAELPGEDIYPLCWDESGLDCVVFGSAA 425
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL---LPLRR 232
V + + + + + A AI + V P L++ L R+
Sbjct: 426 MVEAWAARFGRSSEGIIPVAWGAHCAEAIRETLSMEPEVMGDPSIEGLIECLTSLQRRK 484
>gi|255534182|ref|YP_003094553.1| Uroporphyrinogen-III synthase [Flavobacteriaceae bacterium 3519-10]
gi|255340378|gb|ACU06491.1| Uroporphyrinogen-III synthase, divergent, Flavobacterial type
[Flavobacteriaceae bacterium 3519-10]
Length = 224
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 27/238 (11%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMP-----LSYFIHDRESVFLAMQQSYGAIAIT 55
M I+ T K K K+G + F QS + T
Sbjct: 1 MKILFT--KKFNKMMISK--KLG---SHFSYDFVEVIAITPMEVEAFNLKDQS---LIFT 50
Query: 56 SSESLSTLPANFCRHTPIFAIGEA----SACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
S ++ + N FA + + ++ + G AK + E +
Sbjct: 51 SVNAVRSFFKNGFEPDENFASKNYNKIYTVGITTKRELRKFGFGTFKVTKHAKELSEFII 110
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ ++ ++ G L + R I Y + + + N DA+
Sbjct: 111 ENSSKEKFLHFCGNLALDVLNKTLPLQNVSYRKIPVYETTLLYP------QIAGNYDAVC 164
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F++ S V F + + A + A+ + +N + + LLKL+
Sbjct: 165 FFSPSGVRSFAKF--NSFENLAIFSIGETTANELKKFTQNPIITSKESNLDDLLKLIS 220
>gi|212692522|ref|ZP_03300650.1| hypothetical protein BACDOR_02018 [Bacteroides dorei DSM 17855]
gi|237709156|ref|ZP_04539637.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237724363|ref|ZP_04554844.1| uroporphyrinogen-III synthase [Bacteroides sp. D4]
gi|265752685|ref|ZP_06088254.1| uroporphyrinogen-III synthase [Bacteroides sp. 3_1_33FAA]
gi|212664933|gb|EEB25505.1| hypothetical protein BACDOR_02018 [Bacteroides dorei DSM 17855]
gi|229437232|gb|EEO47309.1| uroporphyrinogen-III synthase [Bacteroides dorei 5_1_36/D4]
gi|229456852|gb|EEO62573.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263235871|gb|EEZ21366.1| uroporphyrinogen-III synthase [Bacteroides sp. 3_1_33FAA]
Length = 249
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 16/239 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPTSEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKVSILDHTAVIFTS 64
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ T + + L QK +
Sbjct: 65 RHAIDHFFNLCAELRVTVPETMKYFCTSETIALYIQKYVQYRKRKVFFGATGKFADLVPS 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++ + + N + L ++KI + Y + + + D +
Sbjct: 125 IVKHNTEKYLVPMSDVHNDEIKTLLDKNKIQHTEVVMYRTVSNDFTPEE----EFDYDML 180
Query: 171 LFYARSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
LF++ + + + C A A+ + + A + S+ L
Sbjct: 181 LFFSPAGINSLMKNFPEFDQKEIAIGCFGPATAKAVKDAGLRLDLEAPTVEAPSMTAAL 239
>gi|306842960|ref|ZP_07475594.1| uroporphyrinogen-III synthase [Brucella sp. BO2]
gi|306286888|gb|EFM58413.1| uroporphyrinogen-III synthase [Brucella sp. BO2]
Length = 208
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 28 MMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPAN---FCRHTPIFAIGEASACLA 84
++PLS + +V + + A+ ITS+ + + R P+FA+GE +A A
Sbjct: 2 LLPLSRTVALSFTV---PDEVFDALTITSANAFRHIAPERLLPYRTLPLFAVGEGTAKAA 58
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
++ GF + G +++ LA + + P ++YL G+ R FED + + + + V
Sbjct: 59 QEAGFKHVIEGGGDAVRLAGTMRQ---ALAPTARVLYLAGRVRQPVFEDEMAANGLSMMV 115
Query: 145 IDCYYSQDIAYPETTMKNLLQN--ADAILFYARSSVLYFFSLPL----PAKISAAFLCLS 198
D Y ++ + YP + +L + A++ Y+ + F P FLC+S
Sbjct: 116 CDVYDTESVMYPPQALSRILGHAPFVAVMLYSGVAAASFVEAMRSITPPFDEKTRFLCIS 175
Query: 199 NNIASAIPASYKNVVTVACFPKETSLLKL 227
+A+ +P+ ++ V+ P E L +L
Sbjct: 176 ARVAAKLPSGWQQQALVSDHPDEKGLFRL 204
>gi|300771536|ref|ZP_07081411.1| uroporphyrinogen-III synthase [Sphingobacterium spiritivorum ATCC
33861]
gi|300761525|gb|EFK58346.1| uroporphyrinogen-III synthase [Sphingobacterium spiritivorum ATCC
33861]
Length = 259
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 67/247 (27%), Gaps = 33/247 (13%)
Query: 3 IVITRPIKKALR-----TQEK----IQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYG 50
I++T P + EK + G+ + +
Sbjct: 18 ILVTIPKPDNDKSPYFNLAEKYNLKLDFRGF-------IHVEGVPAKDVRRDKINLSEHT 70
Query: 51 AIAITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
A+ TS ++ F I EA A ++ +
Sbjct: 71 AVIFTSKNAVDHFFRVCEEMRFEVSAEMKYFCITEAIALYLQKYIQYRKRKIFFGKQTAK 130
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ E + ++ ++ N +++L + + + + +K++
Sbjct: 131 DL--EDVLKKHSKEKFLFPCSDVANEETQNWLQVNGYNFTPAVLFRTVISDLSD--LKDV 186
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ I+F++ SSV + K + A+ + A P
Sbjct: 187 FYD--IIVFFSPSSVQSLYENFPDFKQNNTRIAAFGATTQQALLDHGLILDIPAPTPAAP 244
Query: 223 SLLKLLP 229
S+ +
Sbjct: 245 SMTMAVE 251
>gi|317504615|ref|ZP_07962583.1| uroporphyrinogen-III synthase [Prevotella salivae DSM 15606]
gi|315664264|gb|EFV03963.1| uroporphyrinogen-III synthase [Prevotella salivae DSM 15606]
Length = 248
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 67/244 (27%), Gaps = 22/244 (9%)
Query: 2 YIVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIA 53
I+I++P + Q+ G V P F + A+
Sbjct: 4 KILISQPKPASEKSPYYDLA---QEHGVEMVFRPFFKVEGISSKEFRQQKISMLDHTAVV 60
Query: 54 ITSSESL-------STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
TS ++ L F + E A ++ + + +
Sbjct: 61 FTSRHAIDNYFKLAKELRITIPEDMKYFCLIETIALYIQKYVQYRKRKVFFGTNGKIDGL 120
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ Q + + + N ++ L + Y + + E K+ +
Sbjct: 121 MPQMLKHKD-EKYLVPLSSVHNDDIKNMLDSKGLKHSECVMYRTISNDFTEEEKKDF--D 177
Query: 167 ADAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F++ + V K A + A ++ VA + S+
Sbjct: 178 YDMLVFFSPTGVKALKKNFPDFKQGDIKIAAFGPATAKEVEAEGMHIDLVAPSKEHPSMT 237
Query: 226 KLLP 229
L
Sbjct: 238 SALK 241
>gi|298206917|ref|YP_003715096.1| possible uroporphyrinogen-III synthase [Croceibacter atlanticus
HTCC2559]
gi|83849551|gb|EAP87419.1| possible uroporphyrinogen-III synthase [Croceibacter atlanticus
HTCC2559]
Length = 248
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 65/244 (26%), Gaps = 18/244 (7%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAI 52
M I++++P + E +K +P + ++Y AI
Sbjct: 1 MKVKTILVSQPEPKIENSPYFELEEKQKVKIDFIPFIHVEGVSSKDVRQQKVDLKNYTAI 60
Query: 53 AITSSESLSTLP---ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+TS ++ P + + + K + E
Sbjct: 61 ILTSRNAVDHFFRIAEELRYTVPDSLKYFCQSEAVAYYLQKYVVYRKRKIYVGKRTFQEL 120
Query: 110 KVLFTPQK--PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
L K + + L E + + Y + ++++ +
Sbjct: 121 TPLIKKHKNEKFLLPSSDMLKPMVPETLDELGVSWKQAIFYKTVVSDLSN--LRDVFYD- 177
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
++F++ S + F + + N A V A P+ S+
Sbjct: 178 -ILVFFSPSGIKSLFENFPDYQQNNTRIAVFGNTTIKAAEDHGLKVNIKAPSPETPSMTM 236
Query: 227 LLPL 230
L
Sbjct: 237 ALKK 240
>gi|86131004|ref|ZP_01049603.1| Uroporphyrinogen-III synthase [Dokdonia donghaensis MED134]
gi|85818415|gb|EAQ39575.1| Uroporphyrinogen-III synthase [Dokdonia donghaensis MED134]
Length = 226
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 66/227 (29%), Gaps = 14/227 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ T+ +K R E + G V ++ ++ I ITS +
Sbjct: 1 MTVLSTKKLKPNQR--ELLLNAGLQFVEYDAIRTQEVSFTLSRKLKN----IIITSQNGV 54
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
L N + + + + + + +
Sbjct: 55 RALCNNLSSEQLESIKSCFAVGIKTTALLAENGIKVTKTAQNGEELAHFIAKNHKSESFT 114
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
Y G+ R L E+ + + Y + I ++ + D ILF++ S V
Sbjct: 115 YFCGRQRRDELPTLLKENNVACEEVVVYETHQIT------QSFDRTFDGILFFSPSGVNA 168
Query: 181 FFSLPLPAK-ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F I + C+ A+ + V V+ S +
Sbjct: 169 FAKANKNTLAIDSIAFCIGETTATTAR-LHFKKVIVSNATTIESTIA 214
>gi|302387414|ref|YP_003823236.1| uroporphyrin-III C-methyltransferase [Clostridium saccharolyticum
WM1]
gi|302198042|gb|ADL05613.1| uroporphyrin-III C-methyltransferase [Clostridium saccharolyticum
WM1]
Length = 508
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 64/245 (26%), Gaps = 17/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITS 56
I +T +R ++I+ +G LS I + SY I TS
Sbjct: 255 RIGVTGTDSFTVRLGKQIKSLGGD-WECMLSLIIKSHRKDGKMKAAYEKLPSYTWIVFTS 313
Query: 57 SESLSTLPANFCRHTPIFAIGEASA-------CLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ + F G + +
Sbjct: 314 ANGVKEFFRGLLEWGYDFRSVGHVKFAAVGRGTADELLGHGFCADYIPKKYQVQDLAAGL 373
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
K L T + L+ + + L E I Y L++ D
Sbjct: 374 KGLITGEDRLLIPRSSGGSKELNEILDEAGAFYHDIVLYDVAPAGLETENRAEALRHLDY 433
Query: 170 ILFYARSSVLYFF----SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ F + S V FF A +C+ + A A+ + +A +
Sbjct: 434 LTFSSASGVEAFFKEAEEGIEEALAGLKVVCIGDITAKALSEHGRKADMIAGVYSIQGIT 493
Query: 226 KLLPL 230
+++
Sbjct: 494 EVICR 498
>gi|225012136|ref|ZP_03702573.1| Uroporphyrinogen III synthase HEM4 [Flavobacteria bacterium
MS024-2A]
gi|225003691|gb|EEG41664.1| Uroporphyrinogen III synthase HEM4 [Flavobacteria bacterium
MS024-2A]
Length = 225
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 74/225 (32%), Gaps = 14/225 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ T+ + ++++ + G+ V P + I ITS +
Sbjct: 1 MRLLSTKLLTVN--FKDRLVQKGFSLVEFPFIKIKPLNTEIKTLE----DNIIITSQNAA 54
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
S + N + + T A I+
Sbjct: 55 SLVLNNPHLSPKLEGKNYFCVGEKTKMLLTGNGLKVIKMSQNASILSNFITKNDKNASFS 114
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+L G R E L ++KIPL V Y + + D ILF++ S+V
Sbjct: 115 FLCGIQRRPEIETELAKNKIPLSVHKIYDTLYNSTVIE------SQFDGILFFSPSAVES 168
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+F C+ + A+++ +++ +VA P E LL
Sbjct: 169 YFKK-NTWTSKTHGFCIGSTTAASL-SNFTENFSVAKTPNENQLL 211
>gi|229822490|ref|YP_002884016.1| Uroporphyrinogen III synthase HEM4 [Beutenbergia cavernae DSM
12333]
gi|229568403|gb|ACQ82254.1| Uroporphyrinogen III synthase HEM4 [Beutenbergia cavernae DSM
12333]
Length = 455
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 46/161 (28%), Gaps = 4/161 (2%)
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ--KPLIYLGGKPRNFH 130
+ + +G + A+ + + P+ ++
Sbjct: 200 AWPAAPTTEVAPGGRGSGPHPLPHPPATTSARGLRLEGDPDAPEPETRVLLPQSARAEPT 259
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPA 188
+ L + + Y + P + DA++ + S+ + +L P
Sbjct: 260 LAEGLAAKGWDVDAVTAYRTVPGTPPGPEIARAWTAGEVDAVVLTSGSAAEHLLALLGPP 319
Query: 189 KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + + A+A V A P ++++ L
Sbjct: 320 PAATRVCAIGDVTAAAASRLGIPVAVTADQPTPSAIVAALA 360
Score = 41.7 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 7/67 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITS 56
+++ R ++ G + L F+ + L Y +A+TS
Sbjct: 22 VLVPRTDPD-DAIVRAVEDAGAHVLRAELLAFVPPDDVAPLDAALGRLAAGDYDWLAVTS 80
Query: 57 SESLSTL 63
++ L
Sbjct: 81 PRTVDAL 87
>gi|229918359|ref|YP_002887005.1| Uroporphyrinogen III synthase HEM4 [Exiguobacterium sp. AT1b]
gi|229469788|gb|ACQ71560.1| Uroporphyrinogen III synthase HEM4 [Exiguobacterium sp. AT1b]
Length = 210
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 67/211 (31%), Gaps = 13/211 (6%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAI 76
+++ G +PL +E+ + + + +TS ++ L N R + A+
Sbjct: 7 ARLEASGLSVHHVPLIQT---KETHIPPPVERFDWLVVTSQNAVPAL-QNLTRDVKVAAV 62
Query: 77 GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLI 136
GE + +GFT + + + + + +++ G N L
Sbjct: 63 GEKTKRALEAEGFTVSLMP--ETYTGEALFKQLLDVVSTDDVVLFARGNLANTSHMSML- 119
Query: 137 EHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLC 196
++ Y + + + L+ A+L + S+V +
Sbjct: 120 ---PHVQDWVVYETVPVPLTPAQ-QQQLEIVKALLVLSPSAVEALTPYLSRFNGTW--YA 173
Query: 197 LSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ A+ + V +L++
Sbjct: 174 IGEVTERAVRQVSTLPIRVPECYTMDALIQC 204
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Query: 153 IAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV 212
I ET + ++ D ++ ++++V +L + A+ A V
Sbjct: 22 IQTKETHIPPPVERFDWLVVTSQNAVPALQNLTR----DVKVAAVGEKTKRALEAEGFTV 77
Query: 213 VTVACFPKETSLLKLL 228
+ +L K L
Sbjct: 78 SLMPETYTGEALFKQL 93
>gi|315650220|ref|ZP_07903295.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Eubacterium saburreum DSM 3986]
gi|315487577|gb|EFU77885.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Eubacterium saburreum DSM 3986]
Length = 497
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 66/241 (27%), Gaps = 14/241 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR--ESVFLAMQQSYGAIAITSSES 59
I++T A + + +++G M L + + I TSS
Sbjct: 258 NILLTATRLSAEKMTPRFKEVGANICEMSLIATKEIEIGKDRLECELNNSTHILFTSSNG 317
Query: 60 LSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ ++ I IG S + G F + E
Sbjct: 318 VNIFFEQIKKYGIDIRSLYNKKICVIGSGSGEALNKYGINPDFIPSRFDSKS--FLDEIL 375
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++ L K + + L I I Y + + + +++ D +
Sbjct: 376 PQLDKSSKVLMLRAKLGSDVLPNGLKSAGIGFSDIPIYDTVIDYRKKFELNRNIESFDYV 435
Query: 171 LFYARSSVLYFFSLPLPAK-ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + S+ + ++ + + A+ + A ++ +
Sbjct: 436 VVASASAAKALVEMIEDDSVLNGRVVSIGPVTTKALLKLNIEKIITAKQYDVEGIIDAIK 495
Query: 230 L 230
Sbjct: 496 K 496
Score = 43.7 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 34/116 (29%), Gaps = 6/116 (5%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K ++ + E + + +++I + ++ L N+ ILF + +
Sbjct: 257 KNILLTATRLSAEKMTPRFKEVGANICEMSLIATKEIEIGKDRLECELNNSTHILFTSSN 316
Query: 177 SVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
V FF I + + A+ N + S L
Sbjct: 317 GVNIFFEQIKKYGIDIRSLYNKKICVIGSGSGEALNKYGINPDFIPSRFDSKSFLD 372
>gi|91773092|ref|YP_565784.1| uroporphyrinogen-III synthase [Methanococcoides burtonii DSM 6242]
gi|91712107|gb|ABE52034.1| Uroporphyrinogen-III synthase [Methanococcoides burtonii DSM 6242]
Length = 266
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 68/253 (26%), Gaps = 31/253 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS-----YGAIAITSS 57
I I RP ++++E + G+ V +P+ ++ F A ++ + TS+
Sbjct: 10 IAIMRPESYVVKSRELAESFGFEVVAIPMIEIEGMKDEYFDAFAENIFSGISDYVIFTSA 69
Query: 58 ESLSTLPANFCRHTP-----------IFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ + + AIG + G + S + +
Sbjct: 70 NGIDHTLSKITPDRHSKFIDALNNTNVVAIGPTTRKQLEGIGIGVMGMPGVYSS---EGL 126
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA---YPETTMKNL 163
VE K + + L + + Y E K++
Sbjct: 127 VEYLCPDVKGKQIDTARSAYGSSLLISGLRDCGANVLETKVYTLTLPKGPLQDELITKSV 186
Query: 164 LQNADAILFYARSSVLYFF---------SLPLPAKISAAFLCLSNNIASAIPASYKNVVT 214
D F + V FF ++ + A+ + V
Sbjct: 187 NGEIDVFAFTSSMMVRSFFDRAEALCEGKSIREVLENSLVAAIGIPTANTLKEYGVEVNV 246
Query: 215 VACFPKETSLLKL 227
+L++
Sbjct: 247 TPDEYTFKEILRV 259
>gi|319640022|ref|ZP_07994749.1| uroporphyrinogen-III synthase [Bacteroides sp. 3_1_40A]
gi|317388300|gb|EFV69152.1| uroporphyrinogen-III synthase [Bacteroides sp. 3_1_40A]
Length = 249
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 65/239 (27%), Gaps = 16/239 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P + F + A+ TS
Sbjct: 5 KVLVSQPKPTSEKSPYYDIAEKYGVKIDFRPFIKVENLSAKEFRQQKVSILDHTAVIFTS 64
Query: 57 SESLSTLPANFC------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ T + + L QK +
Sbjct: 65 RHAIDHFFNLCTELRVTVPETMKYFCTSETIALYIQKYVQYRKRKVFFGATGKFADLVPS 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++ + + N + L ++KI + Y + + + D +
Sbjct: 125 IVKHNTEKYLVPMSDVHNDEIKTLLDKNKIQHTEVVMYRTVSNDFTPEE----EFDYDML 180
Query: 171 LFYARSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
LF++ + + + C A A+ + + A + S+ L
Sbjct: 181 LFFSPAGINSLMKNFPEFDQKEIAIGCFGPATAKAVKDAGLRLDLEAPTVEAPSMTAAL 239
>gi|172058145|ref|YP_001814605.1| uroporphyrinogen III synthase HEM4 [Exiguobacterium sibiricum
255-15]
gi|171990666|gb|ACB61588.1| Uroporphyrinogen III synthase HEM4 [Exiguobacterium sibiricum
255-15]
Length = 228
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 72/230 (31%), Gaps = 15/230 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+V+T + E++ V P+ I + + +TS +
Sbjct: 5 RLVLTGSRRPTAEQVERLTAQRIEVVHHPVIETIPVD----FQLPAELDWLIVTSPTGVE 60
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + +HT I +G +A ++G T F + ++ ++ E + L + +
Sbjct: 61 RIQSELPFLQHTKIAVVGSKTAAALIKQGRTPDFIPSAFTGDV--LVEELRPLLRTGQRI 118
Query: 120 IYLGGKPRNFHFEDYLIEHKI-PLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
+ G + L + + Y ++ P ++ + S+V
Sbjct: 119 CFARGNRSRQEPLERLKNAVAAEVLEVITYETKLRVIPPDLLQQTAYIG----LQSPSAV 174
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
L +A ++ + A + VA L+ +
Sbjct: 175 EAIAPLCQE--TTATYVTIGPITEQAARRFGLTPLLVAAVYTLDGLIDCI 222
>gi|294495236|ref|YP_003541729.1| uroporphyrinogen-III synthase [Methanohalophilus mahii DSM 5219]
gi|292666235|gb|ADE36084.1| uroporphyrinogen-III synthase [Methanohalophilus mahii DSM 5219]
Length = 262
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 63/253 (24%), Gaps = 29/253 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-----MQQSYGAIAITSS 57
I I RP +++E Q MGY P+ ++ +F + + TS+
Sbjct: 8 IAIMRPRSYLTKSREMAQSMGYEVFEAPMIELADMKDDMFDIFTDHVLSGKSDYVIFTSA 67
Query: 58 ESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + AIG + + + S + +VE
Sbjct: 68 NGIDYTLDKVDNRNEFTNALNRTKVIAIGPNTKKRLEELDIEVLGIPGVYSS---EGLVE 124
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET---TMKNLLQ 165
K + + + L + + Y +
Sbjct: 125 YLCPDVKGKIVDTARSAYGSILLIEGLEKCGASVLETQVYTLVRPEGDTQKELIKRAAAG 184
Query: 166 NADAILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ F + V FFSL + + A+ I
Sbjct: 185 DIAIFAFTSSMMVRNFFSLAEEMGKTDDIKEVMKKSIVAAIGTPTANTIQEYGVETTIKP 244
Query: 217 CFPKETSLLKLLP 229
C +L+ +
Sbjct: 245 CKYTFDEMLRTIK 257
>gi|313681461|ref|YP_004059199.1| uroporphyrinogen iii synthase hem4 [Sulfuricurvum kujiense DSM
16994]
gi|313154321|gb|ADR32999.1| Uroporphyrinogen III synthase HEM4 [Sulfuricurvum kujiense DSM
16994]
Length = 213
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/207 (10%), Positives = 56/207 (27%), Gaps = 14/207 (6%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFA-IGEASACLA 84
+ +P+ + Y + TS + + +L + S
Sbjct: 15 VIHIPILTIRFLSPDI---NFSDYEGVVFTSKQGVLSLQNYLPDWNRLKCICVSESTAKN 71
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
++ + + I+ + +YL K + + I +
Sbjct: 72 AREAGAIDVEVANGYGDSIPDIL---GAKKRRGKWLYLRPKVVASDWVESARHRGITIDE 128
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
Y S + ++F + S++ F + + +A
Sbjct: 129 AIVYESVCNEEMSNF---PVSQEGVLIFTSPSAIRCFLQNHKILPTHD-VIVIGETTKNA 184
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLR 231
+PA + ++ P + + L +
Sbjct: 185 LPAGTLS--YLSEVPSIEATVD-LARQ 208
>gi|255530296|ref|YP_003090668.1| uroporphyrinogen III synthase HEM4 [Pedobacter heparinus DSM 2366]
gi|255343280|gb|ACU02606.1| Uroporphyrinogen III synthase HEM4 [Pedobacter heparinus DSM 2366]
Length = 256
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/243 (10%), Positives = 67/243 (27%), Gaps = 25/243 (10%)
Query: 3 IVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I++T P + +K + F + A+
Sbjct: 15 ILVTLPKPETEKSPYFDLAKK---YNLKIDFRSFIHVEGVPARDFRKDKITLSDFTAVVF 71
Query: 55 TSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ F I E++A ++ + A +
Sbjct: 72 TSRNAVDHFFRICEEMRYDVPADLKYFCISESTALYLQKYIQYRKRKIFFGKQTAADL-- 129
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + + +Y ++L ++ + + + + + +
Sbjct: 130 AEVLKKHADEKFLYPCSDVATEDTMNFLQKNGYDFTPAVLFRTVVSDLSD--LAEVFYD- 186
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
I F++ SS+ ++ K + N A+ + V A P+ S++
Sbjct: 187 -IIAFFSPSSIQSLYTNFPDFKQNNTRIAAFGVNTHKAVKDAGLIVDIAAPSPEAPSMIM 245
Query: 227 LLP 229
+
Sbjct: 246 AIE 248
>gi|329944048|ref|ZP_08292314.1| uroporphyrinogen-III synthase [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328531094|gb|EGF57945.1| uroporphyrinogen-III synthase [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 292
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 70/242 (28%), Gaps = 18/242 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI-----HDRESVFLAMQQSYGAIAITSS 57
+++ R + R +++ G + ++ + E+ + +TS+
Sbjct: 31 VLLPRVKEP-DRIASALERAGAKVLRAAVTRTVRGDAAALEETARRITAGEEAWLVLTSA 89
Query: 58 ESLSTLPANFCRHTP----IFAIGEASACLARQKGFTQIFHGKDNSIN--LAKIIVEQKV 111
++ L P + +G A+A + S L + ++
Sbjct: 90 RTVKALAPYLHVPVPSTLQVAVVGPATARAWTELTGASPDLVARGSATALLEEPVLAGGP 149
Query: 112 LFTPQ--KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA----YPETTMKNLLQ 165
P + ++ + D L + + Y + P
Sbjct: 150 QAGPDSAQRVLLPASALADPALADGLRRAGWEVERVAAYTTVTADTCDLPPGMGSTWATG 209
Query: 166 NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
DA++ A S+ L P + + + A+A V A P +L
Sbjct: 210 GVDAVVLTAPSTTRAILELLGPPPSTTRLVAIGATTAAAARELGLPVAATASSPTPEGVL 269
Query: 226 KL 227
+
Sbjct: 270 QA 271
>gi|332284595|ref|YP_004416506.1| putative uroporphyrinogen-III synthase [Pusillimonas sp. T7-7]
gi|330428548|gb|AEC19882.1| putative uroporphyrinogen-III synthase [Pusillimonas sp. T7-7]
Length = 271
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/259 (11%), Positives = 66/259 (25%), Gaps = 30/259 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD-RESVFLAMQQSYGAIAITSSESL 60
+V+TRP K ++ +++P + LA Y I S +
Sbjct: 9 RVVLTRPQGKNESLARRLAAADLPALLLPALRIQPLSPDPAGLATPDDYDLIVFVSGHAA 68
Query: 61 STLPANFCRHTPIFAIGEASACLA-------------RQKGFTQIFHGKDNSINLAKIIV 107
R + + + + + +
Sbjct: 69 QFYLQALARRSSGDPWPAHTLAATVGVASARSLKDNSCIPPEQIVHPEPGSRQDSESLWR 128
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT-----MKN 162
+ K ++ + G L E + + Y +
Sbjct: 129 LLESRLGSMKRVLIVRGATGREWLGSKLQEAGLEVHRQAMYERIPEQWSPIQAGRLEQAL 188
Query: 163 LLQNADAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVAC 217
+ L + SV F A A F+ + +A + ++++ V
Sbjct: 189 NGTSPCVFLLTSGESVDAVFDNVRRLGLEHAWRQARFVVIHERVARRLQSTFQASGKVEP 248
Query: 218 ------FPKETSLLKLLPL 230
P + S+ +++ L
Sbjct: 249 PMVKISQPDDDSIFQMITL 267
>gi|282879069|ref|ZP_06287829.1| uroporphyrinogen-III synthase [Prevotella buccalis ATCC 35310]
gi|281298803|gb|EFA91212.1| uroporphyrinogen-III synthase [Prevotella buccalis ATCC 35310]
Length = 249
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/243 (13%), Positives = 64/243 (26%), Gaps = 20/243 (8%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAI 54
I++++P + + EK + G V P F Y AI
Sbjct: 4 KILVSQPQPTSEKSPYYDIEK--EYGVKCVFRPFFKVEGLSAKEFRKQRINILDYSAIVF 61
Query: 55 TSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ F + E A ++ + + +V
Sbjct: 62 TSRHAIDHFFTLAKEMRITIPEDMKYFCVLETIALYIQKYVQYRKRKVFFGTSGKIADLV 121
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
V + + N ++ L K+ Y + E +K +
Sbjct: 122 PLMVK-HKTEKYLVPMSSVHNDDLKNLLDAKKLKHTECVMYRTVSNDMTEEEVKTF--DY 178
Query: 168 DAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D I+F++ + V + A+ A + A S+
Sbjct: 179 DMIIFFSPTGVKALQKNVPHFEQGDIKIGAFGPATCKAVEAEGFRLDLKAPDADNPSMTG 238
Query: 227 LLP 229
L
Sbjct: 239 ALK 241
>gi|154150057|ref|YP_001403675.1| uroporphyrinogen-III synthase-like protein [Candidatus
Methanoregula boonei 6A8]
gi|153998609|gb|ABS55032.1| uroporphyrinogen-III synthase-like protein [Methanoregula boonei
6A8]
Length = 230
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 63/232 (27%), Gaps = 17/232 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIP-VMMPLS-YFIHDRESVFLAMQQ--SYGAIAITS 56
M I +TR K R + G+ + PL D + F + I TS
Sbjct: 1 MKIAVTRLAGKEGRDVARCAAFGHACYSIHPLRSEIREDVVAAFADATDRGEFDCIFFTS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ L + I AIG +A Q S + + E
Sbjct: 61 ALPAKILAPRLEKTPRIIAIGPETARELTQCSIACETLPGFYSRDFVPYLGEWI----KG 116
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K + N D + + R CY L A+A+LF +
Sbjct: 117 KKIGLPRADVPNAPLIDAIAKAGGIPREFRCYRLVPTNESLD-----LHPAEAVLFTSAM 171
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S P P + + + A A+ V L L
Sbjct: 172 SYTSAVWTPRPDLL---VMAIGEITADAMRCGGTFPTIVGDG-SLEGTLTAL 219
>gi|161349972|ref|NP_280958.2| uroporphyrinogen-III synthase [Halobacterium sp. NRC-1]
Length = 238
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 71/241 (29%), Gaps = 22/241 (9%)
Query: 1 MYIVITRPIKK--ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
M + RP A + +G +PV P+ + + + +TS
Sbjct: 1 MNAAVFRPDDDRIADA-VALLDDLGAVPVPDPMLAV----DPTGAIPRGDGAVVVVTSKT 55
Query: 59 SLSTLPANFCRHT--PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + AIG A+A R+ G+T ++ + +V
Sbjct: 56 GVELAADSGWTPGGGRLAAIGPATADACREAGWTVDVVPEEYTS---AGLVAALDGDIDG 112
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY-SQDIAYPETTMKNLLQNADAILFYAR 175
+ + D L E + Y ++ ++T + DA LF +
Sbjct: 113 ARVEVARSDHGSAVLTDGLAEAGAYVHETVLYALTRPAGAGDSTEIAAAGDLDAALFTSS 172
Query: 176 SSVLYFFSLPLPAKI---------SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+V ++ + I A + A +V V +L +
Sbjct: 173 LTVEHWLAAARERGIESAAREGLADATVGAIGPPTAETAADHGISVDVVPDDAGFEALAR 232
Query: 227 L 227
Sbjct: 233 A 233
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 16/60 (26%), Gaps = 1/60 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ +++ V + + A A + V V L+ L
Sbjct: 48 VVVVTSKTGVE-LAADSGWTPGGGRLAAIGPATADACREAGWTVDVVPEEYTSAGLVAAL 106
>gi|163787007|ref|ZP_02181454.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1]
gi|159876895|gb|EDP70952.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1]
Length = 526
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 65/200 (32%), Gaps = 18/200 (9%)
Query: 31 LSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR---HTPIFAIGEASACLARQK 87
+R S L + ITS ++ L NF +K
Sbjct: 336 AIKISLNRISKALIR-NEIQNVIITSKNAVEALLTNFSAPELQFKNIYCVGRRTKRMVEK 394
Query: 88 GFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDC 147
++ H + N+ LA+ +VE + Y R + L E+ I + I+
Sbjct: 395 RIGKVTHTEANAKKLAEYLVEYIDGS----EVTYFCSDLRLDDLPNILTENNITVNEIEA 450
Query: 148 YYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPA 207
Y ++ A N D +FY+ S+V F I C+ A
Sbjct: 451 YQTKFDADKVE------GNLDGAMFYSPSTVESFLKQNKANGI---AFCIGETTAKVAKQ 501
Query: 208 SYKNVVTVACFPKETSLLKL 227
V VA P S+++L
Sbjct: 502 H-FEDVRVAKVPTVESVIEL 520
>gi|70726259|ref|YP_253173.1| uroporphyrinogen III synthase [Staphylococcus haemolyticus
JCSC1435]
gi|68446983|dbj|BAE04567.1| uroporphyrinogen III synthase [Staphylococcus haemolyticus
JCSC1435]
Length = 226
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/229 (9%), Positives = 57/229 (24%), Gaps = 19/229 (8%)
Query: 1 MY--IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
M +V+T+ + + P + Y I +S
Sbjct: 1 MKPVVVMTQSSEFNSDLV--------EIMHKPFIEIQSLEFD-TQVLHHKYDWIIFSSKN 51
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
++ + + + N + + F +
Sbjct: 52 AVRIFYKYLNQLDVKYVAVIGQKTAELCEALKINVDFIPNDYSQEGFL----NQFKKDQQ 107
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LFYARS 176
I + + + + ID Y + L+++ F + S
Sbjct: 108 SILIPSSAEARPKLQHTLAQNNIVTKIDLYKPIPNDRNIREVIQLIEHHKVHALTFSSSS 167
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+V + +P ++ + A+ + + +A SL+
Sbjct: 168 AVNAYIKHDVPCGFD-KYVAIGAQTANTLRKNGLKP-LIADKQTSESLI 214
>gi|329956459|ref|ZP_08297056.1| uroporphyrinogen-III synthase [Bacteroides clarus YIT 12056]
gi|328524356|gb|EGF51426.1| uroporphyrinogen-III synthase [Bacteroides clarus YIT 12056]
Length = 250
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/239 (10%), Positives = 63/239 (26%), Gaps = 16/239 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKVSILDHTAVIFTS 64
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ T + + L QK +
Sbjct: 65 RHAIDHFFHLCTELRVTIPETMKYFCVTETIALYIQKYVQYRKRKIFFGNTGKFDDLLPS 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++ + + ++ L + KI + Y + + + D +
Sbjct: 125 IVKHKTEKYLVPMSDVHTEDIKNLLDKSKIQHTEVVMYRTVSNDFTPDE----KFDYDML 180
Query: 171 LFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+F++ + V + + A A+ + + A + S+ L
Sbjct: 181 VFFSPAGVSSLKKNFPDFEQKEIKIGTFGSTTAQAVRDAGLRLDLEAPSVQAPSMTAAL 239
>gi|126178489|ref|YP_001046454.1| uroporphyrinogen III synthase HEM4 [Methanoculleus marisnigri JR1]
gi|125861283|gb|ABN56472.1| Uroporphyrinogen III synthase HEM4 [Methanoculleus marisnigri JR1]
Length = 226
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 66/235 (28%), Gaps = 17/235 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPV-MMPL---SYFIHDRESVFLAMQQSYGAIAITS 56
M I ITR KA + G+ + PL V + + + +S
Sbjct: 1 MKIAITRLENKAAGDRALCATYGHDCYTVSPLRADLRPDRIDTFVEAVHRGEFDCLFFSS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + R + AIG +A + R G S + + +
Sbjct: 61 ALPAAVVGPKLERWPRVIAIGPKTAEVLRGFGIEAEVLPTFYSRDFVPYLGDW----LRG 116
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ + N D + +R Y + L ADA LF +
Sbjct: 117 RTVGIPRADVPNPDLLDAIAAAGGTVREERVYALVPT-----GTELALDAADAALFTSAM 171
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
S P + + + A A+ A V L+ L L
Sbjct: 172 SYREARWRPRDDLL---LIAIGEITADAMRAGGHPPAVVGDG-SLAGTLEALNLH 222
>gi|228475180|ref|ZP_04059906.1| uroporphyrinogen-III synthase [Staphylococcus hominis SK119]
gi|314936226|ref|ZP_07843573.1| uroporphyrinogen-III synthase [Staphylococcus hominis subsp.
hominis C80]
gi|228270791|gb|EEK12193.1| uroporphyrinogen-III synthase [Staphylococcus hominis SK119]
gi|313654845|gb|EFS18590.1| uroporphyrinogen-III synthase [Staphylococcus hominis subsp.
hominis C80]
Length = 223
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 64/228 (28%), Gaps = 17/228 (7%)
Query: 1 MY--IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
M IV+T+ K + P L + +Y + +S
Sbjct: 1 MKPVIVMTQTSKVQSDMV--------EVIHKPFIKIQSLEFDTQL-LHDNYDWLIFSSKN 51
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
++ + K N + ++ L +
Sbjct: 52 AVHLFYKYLEYVNVKHIAVVGAKTAQLCKQLGINIDFIPNDYSQEGLLE---GLNLEKSS 108
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-DAILFYARSS 177
++ + L EH +++ D + + N +A+ F + S+
Sbjct: 109 ILIPSSAQARPKLQQTLAEHNNVVKIDLYTPIADRENIIEVINLIQHNQVEALTFSSSSA 168
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
V Y+FS P + + A++I A +A +L+
Sbjct: 169 VRYYFSEAFPKHFK-NYYAIGQQTANSIRAYGYEP-YIADKQTSEALI 214
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYK 210
I E + L N D ++F ++++V F+ + + A
Sbjct: 26 IKIQSLEFDTQLLHDNYDWLIFSSKNAVHLFYKYLEYVNVK-HIAVVGAKTAQLCKQLGI 84
Query: 211 NVVTVACFPKETSLLKLLPLRR 232
N+ + + LL+ L L +
Sbjct: 85 NIDFIPNDYSQEGLLEGLNLEK 106
>gi|329764684|ref|ZP_08256280.1| uroporphyrinogen III synthase HEM4 [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329138830|gb|EGG43070.1| uroporphyrinogen III synthase HEM4 [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 266
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 65/242 (26%), Gaps = 32/242 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ-----SYGAIAITSS 57
I ITR + + + K P+ +P + E + SS
Sbjct: 7 IAITRSKDDSTEFIDLVTKNNARPISLPTIELVSKGEKIVDEFLDSVKYYKPDYSVFMSS 66
Query: 58 ESLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
++++ L + + + A+G + ++G + S
Sbjct: 67 KAVTLLFDTAKKVSKFEQLQLAVANTIVMAVGPKTKIALEKEGIRPAYMPNIFSSVGVGE 126
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT--MKNL 163
+ L K +I ++ L + I ++ I Y + L
Sbjct: 127 L--FTKLHAVGKKVIVPRSGASTPFLKELLEKIGIDVKEIHLYDVCAFRDTTQWNEFREL 184
Query: 164 LQNADA--ILFYARSSVLYFFSLPLPA---------KISAAFLCLSNNIASAIPASYKNV 212
I+F + SSV FF + + + + + +
Sbjct: 185 FSQNKINGIVFTSASSVRAFFEIMSKDYDQNSLLKNLEKLSVVSIGPFTSDELKKFNIKN 244
Query: 213 VT 214
Sbjct: 245 TI 246
>gi|257069788|ref|YP_003156043.1| uroporphyrinogen-III synthase [Brachybacterium faecium DSM 4810]
gi|256560606|gb|ACU86453.1| uroporphyrinogen-III synthase [Brachybacterium faecium DSM 4810]
Length = 260
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/231 (9%), Positives = 63/231 (27%), Gaps = 11/231 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITSS 57
+++TRP + ++ PL + + ++ + +TS
Sbjct: 10 VLVTRPAGRGASLLHLLEAQSVPAEHTPLVRLVPAEGEELAAARDRLADGAHTHLVVTSR 69
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ L A P + A + + + +V Q
Sbjct: 70 TAAEALGAVAV---PEGTVVVAVGGGTAEALGAVGIPATLVAGGSGEALVAQMPEADEGA 126
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARS 176
+++ + + L + + Y + + P L A++ +
Sbjct: 127 CVLFPASSAASRTVPEGLRAKGYRVHEVTAYRPERLEPPPAVAVALATGGYSALVLTSPM 186
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
++ S + + ++A+ A+ A + +L
Sbjct: 187 IARQAAAV--GVHPSIPIITIGPPTSAAVRAAGLTPAREADETTDEALAAA 235
>gi|149371958|ref|ZP_01891277.1| uroporphyrinogen-III synthase [unidentified eubacterium SCB49]
gi|149355098|gb|EDM43659.1| uroporphyrinogen-III synthase [unidentified eubacterium SCB49]
Length = 248
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 67/246 (27%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAI 52
M I++++P + + I + +P + Y AI
Sbjct: 1 MKVKTILVSQPEPKVENSPYFDLIDRQKVKIDFVPFIHVESVPGKEVRNQKIDLNDYTAI 60
Query: 53 AITSSESLST-------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ L F EA A ++ + +++
Sbjct: 61 ILTSRNAVDHYFRIAEELRFKVPDSMKYFCQSEAVAYYLQKYVVYRKRKIYVGKRTFSEL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + L + K+ + Y + + ++++
Sbjct: 121 --SPLIKKYKNEKFLLPSTDKLKDEVPKVLNDLKVSWQQAILYRTVISDLSD--LRDVFY 176
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ ++F++ S + K + N A S V A P S+
Sbjct: 177 D--ILVFFSPSGIESLLHNFPDFKQNDTRIAVFGNTTVKAAGESGLRVDIKAPTPDTPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALEK 240
>gi|150024156|ref|YP_001294982.1| uroporphyrinogen-III synthase [Flavobacterium psychrophilum
JIP02/86]
gi|149770697|emb|CAL42161.1| Uroporphyrinogen-III synthase [Flavobacterium psychrophilum
JIP02/86]
Length = 220
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 61/213 (28%), Gaps = 20/213 (9%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRH---TPI 73
E + + + H + + TS ++ ++ + T
Sbjct: 18 EALVNANFNVIEADFIKTEHQDFDLKNIK----DNLIFTSQNAVYSILQHPKCDELKTKN 73
Query: 74 FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFED 133
+ + + + +LA+II + + G R
Sbjct: 74 VFCVGLKTKILLSENGFNVDVYTGYASDLAEIITLIHGSDS----FTFFSGNLRREILPQ 129
Query: 134 YLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA 193
L E + I Y + + + + +AILF++ S V +
Sbjct: 130 TLKEANVNFNEIKVYETTLTP------QKIKNSVEAILFFSPSGVESYLK--DNTLKKEV 181
Query: 194 FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
C+ A A+ + + +A P +++
Sbjct: 182 CFCIGETTAEALQKT-TKNIIIAENPTIEDVIE 213
>gi|19114920|ref|NP_594008.1| uroporphyrinogen-III synthase Ups1 [Schizosaccharomyces pombe
972h-]
gi|3334214|sp|P87214|HEM4_SCHPO RecName: Full=Uroporphyrinogen-III synthase; Short=UROIIIS;
Short=UROS; AltName: Full=Hydroxymethylbilane hydrolyase
[cyclizing]; AltName: Full=Uroporphyrinogen-III
cosynthase
gi|2190052|dbj|BAA20416.1| urophorphyrinogen III synthase [Schizosaccharomyces pombe]
gi|2388959|emb|CAB11692.1| uroporphyrinogen-III synthase Ups1 [Schizosaccharomyces pombe]
Length = 251
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 75/232 (32%), Gaps = 20/232 (8%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----YGAIAITSSESLSTLPANFC 68
E +K G +P+ E ++ Y + +TS TL
Sbjct: 15 DPYVEAFEKYGRDTAFIPVLRHKRVHEEQLRDKLKNVRKTYCGLIVTSQRVSETLDEALK 74
Query: 69 RHT-----------PIFAIGEASACLARQKGFTQIFHGKDNS-INLAKIIVEQKVLFTPQ 116
+ PIF +G A+ R+ GF Q LA +I E
Sbjct: 75 QEDETERQKILMETPIFTVGPATDDSIRRLGFQQTHGKDCGRGEVLADLIEEWYTTTKQH 134
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
KPL++L G+ + L + + + Y +Q++ ET +K+ ++ I +
Sbjct: 135 KPLLFLVGEKHRDIIQRKLGD--DRVDSLIVYATQELENTETQIKDTIRKHPTIDWIVAF 192
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S SL ++ + + V+ P SL +
Sbjct: 193 SPTSICSLLNTFEL--KIATIGPTTGDYLKKLGTQPNVVSPAPNPESLASSI 242
>gi|314933824|ref|ZP_07841189.1| uroporphyrinogen-III synthase [Staphylococcus caprae C87]
gi|313653974|gb|EFS17731.1| uroporphyrinogen-III synthase [Staphylococcus caprae C87]
Length = 227
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 58/209 (27%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ PL + L Y + +S ++
Sbjct: 21 IIHKPLIQIQELSFNEHLLN-HDYDWLIFSSKNAVKYFYEYLKSVKVKKVAVIGEKTAQY 79
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ + + E + + ++ + L + + + I
Sbjct: 80 CEDLNINVDFIPCDFSQEGFLKE---FNSMNQRILLPSSQLARPKLAHQLNNNNV-VIKI 135
Query: 146 DCYYSQDIAYPETTMKNLLQNA--DAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y +K L++N DAI F + S+V Y+F + + + A+
Sbjct: 136 DLYKPIPHHQNINEVKQLVKNNELDAITFSSSSAVRYYFENGDTPEFH-HYYAIGKQTAT 194
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ V VA S++ + R
Sbjct: 195 VLKNYN-QYVQVADSQTSESIIAKILESR 222
>gi|223044098|ref|ZP_03614137.1| uroporphyrinogen-III synthase [Staphylococcus capitis SK14]
gi|222442492|gb|EEE48598.1| uroporphyrinogen-III synthase [Staphylococcus capitis SK14]
Length = 227
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 59/209 (28%), Gaps = 9/209 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+ PL + L Y + +S ++
Sbjct: 21 IIHKPLIQIQELSFNEHLLN-HDYDWLIFSSKNAVKYFYEYLKSVKVNKVAVIGEKTAQY 79
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ + + + E + + ++ + L + + + I
Sbjct: 80 CEDLNINVDFIPSDFSQEGFLKE---FNSMNQRILLPSSQLARPKLAHQLNNNNV-VIKI 135
Query: 146 DCYYSQDIAYPETTMKNLLQNA--DAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
D Y +K L++N DAI F + S+V Y+F + + + A+
Sbjct: 136 DLYKPIPHQQNINEVKQLVKNNELDAITFSSSSAVRYYFENGDTPEFH-HYYAIGKQTAT 194
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ V VA S++ + R
Sbjct: 195 VLKNYN-QNVQVADSQTSESIIAKILESR 222
>gi|467061|gb|AAA17245.1| cysG [Mycobacterium leprae]
Length = 472
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 49/166 (29%), Gaps = 17/166 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R +A E++ G +PV +P R + + + TS
Sbjct: 296 VLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQWVVFTS 355
Query: 57 SESLSTLPANFCRH---------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAKI 105
+ ++ + F I +GEA+A R G + + L
Sbjct: 356 TNAVRAVWEKFGEFGLDARAFSGVKIACVGEATADRVRAFGISPELVPAGEQSSLGLLDE 415
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+F P ++ + L + + Y +
Sbjct: 416 FPPYDSVFDPVNRVLLPRADIATETLAEGLRGCGWEIEDVTAYRTV 461
Score = 39.4 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 12/132 (9%), Positives = 33/132 (25%), Gaps = 11/132 (8%)
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + ++ K + + L + + + P + +
Sbjct: 283 LNWWESRALYGWTVLVPRTKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKG 342
Query: 166 ----NADAILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVVTV 215
++F + ++V + + C+ A + A + V
Sbjct: 343 LVDGRFQWVVFTSTNAVRAVWEKFGEFGLDARAFSGVKIACVGEATADRVRAFGISPELV 402
Query: 216 -ACFPKETSLLK 226
A LL
Sbjct: 403 PAGEQSSLGLLD 414
>gi|227536343|ref|ZP_03966392.1| uroporphyrinogen-III synthase [Sphingobacterium spiritivorum ATCC
33300]
gi|227243719|gb|EEI93734.1| uroporphyrinogen-III synthase [Sphingobacterium spiritivorum ATCC
33300]
Length = 259
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 67/247 (27%), Gaps = 33/247 (13%)
Query: 3 IVITRPIKKALR-----TQEK----IQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYG 50
I++T P + EK + G+ + +
Sbjct: 18 ILVTIPKPDNDKSPYFNLAEKYNLKLDFRGF-------IHVEGVPAKDVRKDKINLSEHT 70
Query: 51 AIAITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
A+ TS ++ F I EA A ++ +
Sbjct: 71 AVIFTSKNAVDHFFRVCDEMRFEVSAEMKYFCITEAIALYLQKYIQYRKRKIFFGKQTAK 130
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ E + ++ ++ N +++L + + + + +K++
Sbjct: 131 DL--EDVLKKHSKEKFLFPCSDVANEETQNWLQVNGYNFTPAVLFRTVISDLSD--LKDV 186
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ I+F++ SSV + K + A+ + A P
Sbjct: 187 FYD--IIVFFSPSSVQSLYENFPDFKQNNTRIAAFGATTQQALLDHGLILDIPAPTPVAP 244
Query: 223 SLLKLLP 229
S+ +
Sbjct: 245 SMTMAVE 251
>gi|126724567|ref|ZP_01740410.1| hypothetical protein RB2150_12066 [Rhodobacterales bacterium
HTCC2150]
gi|126705731|gb|EBA04821.1| hypothetical protein RB2150_12066 [Rhodobacterales bacterium
HTCC2150]
Length = 206
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 12/202 (5%)
Query: 28 MMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQK 87
+ PL + + TS ++ + Q
Sbjct: 12 IAPLMRIEFTPQ----IQIPDFDIAIFTSPSGVNAFN--GTGGGRVAYCVGDRTAKIAQD 65
Query: 88 GFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDC 147
K + NL ++ + PQ + + G + + L +H + +
Sbjct: 66 MGFAPVSAKGGATNLVALLRD----DQPQGRICHFRGAKVHQSIAEPLSDHGMHVFEKIV 121
Query: 148 YYSQDIAYPETTMKNLLQNADAIL-FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIP 206
Y + E+T+K L + + +++ + F + C+S ++ A+
Sbjct: 122 YQQVPQNFDESTLKLLANSDGLKIPLFSKETARQFEKQV-IDGQNCDIFCISKDVQGALN 180
Query: 207 ASYKNVVTVACFPKETSLLKLL 228
A + +TV P + S+++ L
Sbjct: 181 AGKYHKITVISEPTQISMVQSL 202
>gi|60679671|ref|YP_209815.1| uroporphyrinogen-III synthase [Bacteroides fragilis NCTC 9343]
gi|253564539|ref|ZP_04841996.1| uroporphyrinogen-III synthase [Bacteroides sp. 3_2_5]
gi|265764799|ref|ZP_06093074.1| uroporphyrinogen-III synthase [Bacteroides sp. 2_1_16]
gi|60491105|emb|CAH05853.1| possible uroporphyrinogen-III synthase [Bacteroides fragilis NCTC
9343]
gi|251948315|gb|EES88597.1| uroporphyrinogen-III synthase [Bacteroides sp. 3_2_5]
gi|263254183|gb|EEZ25617.1| uroporphyrinogen-III synthase [Bacteroides sp. 2_1_16]
gi|301161136|emb|CBW20674.1| possible uroporphyrinogen-III synthase [Bacteroides fragilis 638R]
Length = 250
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 68/242 (28%), Gaps = 18/242 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESVSAKEFRQQKVSILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + + ++
Sbjct: 65 RHAIDHFFHLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLIPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + N D L ++ I Y + M+ + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHNDDVRDLLDKNNIQHTECVMYRTV----SNDFMEGEEFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + + A A+ + + A K S+ L
Sbjct: 180 LVFFSPAGVSSLKKNFPDFDQKDIKIGTFGSTTAQAVRDAGLRLDLEAPNVKAPSMTAAL 239
Query: 229 PL 230
L
Sbjct: 240 DL 241
>gi|330993441|ref|ZP_08317376.1| uroporphyrinogen III synthase HEM4 [Gluconacetobacter sp. SXCC-1]
gi|329759471|gb|EGG75980.1| uroporphyrinogen III synthase HEM4 [Gluconacetobacter sp. SXCC-1]
Length = 217
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 80/216 (37%), Gaps = 13/216 (6%)
Query: 22 MGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASA 81
G+ P+ P+ + + ++ A+ +TS ++L+ L P + +G+A+A
Sbjct: 4 AGWRPIAAPMLHVVPLGLTLGAFRP---DAVVLTSGQALAALDDPRLHACPCYVVGQATA 60
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
AR GF+ + + L ++ + L+ G+ + L
Sbjct: 61 RRARAAGFSHVIPASGTAAELVALLRASCRAGS---RLLLAVGRGYGGDMANELRGAGFR 117
Query: 142 LRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLP----AKISAAFL 195
+ Y + + + L+ A++FY+ + F + P +
Sbjct: 118 VARRCVYAIEPVRVLPDATEADLRAEQVAAVMFYSTRTAEAFVAALDPVVAGMLARVDAI 177
Query: 196 CLSNNIASAIPAS-YKNVVTVACFPKETSLLKLLPL 230
+S +A+A+ + V VA P + ++L L
Sbjct: 178 AMSGTVAAALTGGPHWRAVRVATHPDQDAMLDSLGR 213
>gi|294670385|ref|ZP_06735267.1| hypothetical protein NEIELOOT_02103 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307849|gb|EFE49092.1| hypothetical protein NEIELOOT_02103 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 240
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 75/231 (32%), Gaps = 11/231 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM--QQSYGAIAITSSESL 60
++I RP +A ++ G+ + D +++ Q+ A+ S ++
Sbjct: 4 LLIVRPAAQAAADRQTCTAAGWQGSIFSPFAIEADADALARLPGQFQTASAVFWVSPSAV 63
Query: 61 STLPANF---CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ + R P A+G +SA + T + D + + A + +
Sbjct: 64 AVAAPHLEFSDRSPPQIAVGGSSARALQAYSRTPVCFPDDGNDSEAVLRLPLWQTLPQGV 123
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + G L ++ + Y+ + + T DA + S
Sbjct: 124 AVLIVRGHGGREFLAHQLTLRGFNVQTAEVYFRRPLEPDWTQFAA--APPDAAWITSAES 181
Query: 178 VLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V F+ P S + +A A+ A+ V + +L
Sbjct: 182 VRLLFAAAPPPFTQKLQSLLYFTHHQRVAEALRAAGATRVELIPALDIDTL 232
>gi|257052011|ref|YP_003129844.1| uroporphyrinogen-III synthase [Halorhabdus utahensis DSM 12940]
gi|256690774|gb|ACV11111.1| Uroporphyrinogen III synthase HEM4 [Halorhabdus utahensis DSM
12940]
Length = 244
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 68/241 (28%), Gaps = 19/241 (7%)
Query: 3 IVITRPIKKALRTQ-EKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ + RP + L T E ++ + P+ P+ + + TS
Sbjct: 8 VAVFRPDDERLETAVELLESLDANPIADPMLAVEPTET----LPRTDAEVVVFTSKTGAE 63
Query: 62 -TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ AIGE +A R G + S + +V+ +
Sbjct: 64 LVAGEWTPGDATVCAIGEPTAAALRANGIAVDVVPETYSSSG---LVDALGEQVDGLRVE 120
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-DAILFYARSSVL 179
+ D L + Y A +++ + DA LF + +V
Sbjct: 121 VARSDHGSDVLLDGLESAGAYVHETVLYRLVRPANAGESVRRAAEGDLDAALFTSSLTVE 180
Query: 180 YFFSLPLPAKISAAFL---------CLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+F ++ AA + + +V V + +L +
Sbjct: 181 HFLAIASERGQRAAAIEGLSEAVVGTIGGPTRETAAGQGVDVDVVPEAAEFEALATAVID 240
Query: 231 R 231
R
Sbjct: 241 R 241
>gi|86132450|ref|ZP_01051044.1| Uroporphyrinogen-III synthase [Dokdonia donghaensis MED134]
gi|85817011|gb|EAQ38195.1| Uroporphyrinogen-III synthase [Dokdonia donghaensis MED134]
Length = 248
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 64/246 (26%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAI 52
M I++++P E ++ +P + + Y AI
Sbjct: 1 MKVKTILVSQPKPKVDNSPYFELEERQRVKIDFIPFIHVEGVSGKEVRLQKVDLKDYTAI 60
Query: 53 AITSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ F EA A ++ + ++
Sbjct: 61 ILTSRNAVDHFFRIAEEMRFKVPDTLKYFCQSEAVAYYLQKYVVYRKRKIYVGKRTFPEL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
I K + + + L E + Y + +
Sbjct: 121 IPLIKKH--KNETFLLPSSDKFKPIVPELLDELGVKWMQSTFYKTVVSDLS----QYENV 174
Query: 166 NADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + F + + N A + + +A P+ S+
Sbjct: 175 FYDILVFFSPSGIDSLFKNFPNFEQKNTRIAVFGNTTVKAAEEAGLEINIMAPTPETPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALEK 240
>gi|50305117|ref|XP_452517.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641650|emb|CAH01368.1| KLLA0C07150p [Kluyveromyces lactis]
Length = 260
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 85/245 (34%), Gaps = 30/245 (12%)
Query: 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSY----GAIAITSSESLSTLPA- 65
+ ++K G++P+ +PL H E L + Y I ITS ++ L
Sbjct: 14 SDPYEQKFAANGFLPIFVPLIRHFHLPEEALQLFKNRQYLLSLKYIIITSQRTVECLNES 73
Query: 66 ----------NFCRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLF 113
N + I+ +G A++ ++ GF I G + N LA +I++ +
Sbjct: 74 ILPQLTPDEQNILKQKTIYTVGPATSAFLKKSGFLCIRGGVEVGNGALLADLILQSHINE 133
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--------- 164
+ ++L G+ R + L H + + Y ++++ T
Sbjct: 134 S-IDHFLFLVGEIRRDVIPNRLNSHGYKVNEVVTYRTENLEDNIGTFVASCESNGDNVST 192
Query: 165 -QNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+N ++F++ S + F + + V+ P+ S
Sbjct: 193 DRNNTWVVFFSPQGTEEIISFLK-ERPGYKFASIGPTTKQYLLEKGLVPDVVSNKPEPVS 251
Query: 224 LLKLL 228
L +
Sbjct: 252 LFNAI 256
>gi|307195459|gb|EFN77345.1| Uroporphyrinogen-III synthase [Harpegnathos saltator]
Length = 278
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 85/238 (35%), Gaps = 23/238 (9%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSESLSTL--------- 63
+ ++ GY + F +S L+M Y + +TS ++ +
Sbjct: 25 VKALKAAGYTCEFLRTLRFEFVNKSELRKWLSMAHDYSGLILTSLRTVEAIALAVDEDTS 84
Query: 64 PANFCRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTPQKPLIY 121
+ + P + +G A+ LA+ + Q G NS LA+ I + KPL Y
Sbjct: 85 ILDHWKKLPAYCVGPATESLAQSQLGLQCCIGGQLGNSQELAEKIALDIKKDS--KPLFY 142
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA----DAILFYARSS 177
+ D L I + + Y + + + +L+ +F++ S
Sbjct: 143 PCSEIARGTITDILRACNITMHKLVVYKTLECESLGEDLVKILKKYVDHPKMFVFFSPSI 202
Query: 178 VLYFFSLPLPAK---ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
YF + + + + + A+ N+ VA P+ +L++ + + +
Sbjct: 203 AEYFAAQLKKNFYSIMEIKAVAIGSVTRLAMYHYGFNLFAVAKKPEPAALVEAITIAK 260
>gi|307546844|ref|YP_003899323.1| uroporphyrinogen-III synthase [Halomonas elongata DSM 2581]
gi|307218868|emb|CBV44138.1| uroporphyrinogen-III synthase [Halomonas elongata DSM 2581]
Length = 263
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/227 (11%), Positives = 72/227 (31%), Gaps = 13/227 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSE 58
++I RP +A E I+ G+ + ES + + + +TS
Sbjct: 6 VLICRPGARAAPLAEAIEAAGFAVECGEVMALEALPESQAMRSAWLDFDQFQRVVVTSPF 65
Query: 59 SLSTLPANFCRHTP-------IFAIGEASACLARQKGFTQIFHGKDNSINLAK-IIVEQK 110
+ L R+ P + +G ++A + ++ + ++ ++
Sbjct: 66 AAECLAEALDRYWPQLPVGTEYYGVGPSTAAALHEALGVRVHVPPRGEEHSSEALLSLGS 125
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN-LLQNADA 169
+ + + + G+ + L E L + Y + + + + A
Sbjct: 126 LQRLDGQRTLLVAGEGGRTLLAETLAERGARLTHLAVYRRRLLEPSPVLQRRLREGDYHA 185
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
++ + + + + + S+ +A+ V VA
Sbjct: 186 LVVSSGEILEHLARWCSRTALDQPLIVSSHRLATLAGTLGFRVPVVA 232
>gi|332291691|ref|YP_004430300.1| Uroporphyrinogen III synthase HEM4 [Krokinobacter diaphorus
4H-3-7-5]
gi|332169777|gb|AEE19032.1| Uroporphyrinogen III synthase HEM4 [Krokinobacter diaphorus
4H-3-7-5]
Length = 226
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 64/227 (28%), Gaps = 14/227 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ T+ +K R E + G V V + + + ITS +
Sbjct: 1 MTVLSTKKLKPNQR--ELLLNAGLQFVEYDAIRTQ----EVAFTLSRKLKNVIITSQNGV 54
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
L N + + + + + +
Sbjct: 55 RALLNNLSSEQLESIKSCFTVGTKTTALLAENGIKVTKTAQNGEELARFIAENYKIESFT 114
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
Y G+ R L E+ + + Y + I ++ + D ILF++ S V
Sbjct: 115 YFCGRQRRDELPTLLKENNVACEEVVVYETHQIT------QSFDRTFDGILFFSPSGVNA 168
Query: 181 FFSLPLPAK-ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + I + C+ A+ V V+ S +
Sbjct: 169 FAKANKNTRAIDSIAFCIGETTATTARIR-FKKVIVSNSTTIESTIA 214
>gi|163856377|ref|YP_001630675.1| putative uroporphyrinogen-III synthase [Bordetella petrii DSM
12804]
gi|163260105|emb|CAP42406.1| putative uroporphyrinogen-III synthase [Bordetella petrii]
Length = 263
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/255 (10%), Positives = 68/255 (26%), Gaps = 32/255 (12%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-ESVFLAMQQSYGAIAITSSESLS- 61
++TRP + +++ G+ + +P + L + Q + + S +
Sbjct: 6 ILTRPDSRNEALARELRAAGWHVLELPALEIRPLPVQPAALPLPQDHDLVVFVSGNAARL 65
Query: 62 --------TLPANFCRHTPIFAIGEASACL------ARQKGFTQIFHGKDNSINLAKIIV 107
A + T +G ASA + + + +
Sbjct: 66 YMTQLRDVAGQAAWPLATAAATVGPASARALRNLPGFGADTTVLCPPPEAPTHDSEALWA 125
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN- 166
+ + ++ + G + L + Y Q +P ++ L
Sbjct: 126 VLRARGPLPRRVLLVRGTQGRDWLAERLEAAGAQVFRHAVYQRQPAPWPAAAVRQLHDWA 185
Query: 167 ----ADAILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIP-----ASYKNV 212
L + + + + + +A + + +
Sbjct: 186 GQGAQPTWLLTSGEGLAAVQAQVRQLGLHDWWRACPCIVTHPALARRLQHDAGGDAPAPM 245
Query: 213 VTVACFPKETSLLKL 227
V V P + ++L
Sbjct: 246 VKVC-LPVDEAILAA 259
>gi|289550574|ref|YP_003471478.1| Uroporphyrinogen-III synthase [Staphylococcus lugdunensis HKU09-01]
gi|315658069|ref|ZP_07910941.1| uroporphyrinogen-III synthase [Staphylococcus lugdunensis M23590]
gi|289180106|gb|ADC87351.1| Uroporphyrinogen-III synthase [Staphylococcus lugdunensis HKU09-01]
gi|315496398|gb|EFU84721.1| uroporphyrinogen-III synthase [Staphylococcus lugdunensis M23590]
Length = 226
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 60/210 (28%), Gaps = 7/210 (3%)
Query: 24 YIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACL 83
V P + L + +Y I +S ++ F +
Sbjct: 18 IEIVHKPFIKIQSLEFNTQL-LHDNYDWIIFSSKNAVQLFYPFFNSVNIKYVAAIGDKTA 76
Query: 84 ARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLR 143
+ + + +I + K+ + L+ + + L ++ ++
Sbjct: 77 QLCQELGIKVDFIPDDYSQEGLISKLKLQN---QKLLIPSSAQARPYLQRKLSQNNKVVK 133
Query: 144 VIDCYYSQDIAYPETTMKNL-LQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIA 202
+ +K + DA+ F + S+V YFF A+ + A
Sbjct: 134 IDLYTPIAHRDNIHEVIKLISNNKIDALTFSSSSAVHYFFEEANLPNF-YAYYAIGRQTA 192
Query: 203 SAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ I +A SL+ + R
Sbjct: 193 NTIRYYGYEP-KIADNQTLESLINKIIESR 221
>gi|255010302|ref|ZP_05282428.1| uroporphyrinogen-III synthase [Bacteroides fragilis 3_1_12]
gi|313148101|ref|ZP_07810294.1| uroporphyrinogen-III synthase [Bacteroides fragilis 3_1_12]
gi|313136868|gb|EFR54228.1| uroporphyrinogen-III synthase [Bacteroides fragilis 3_1_12]
Length = 250
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 69/242 (28%), Gaps = 18/242 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESVSAKEFRQQKVSILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + + ++
Sbjct: 65 RHAIDHFFHLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLIPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + N ++ L ++ I Y + M+ + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHNDDVKNLLDKNNIQHTECVMYRTV----SNDFMEGEEFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + + A A+ + + A K S+ L
Sbjct: 180 LVFFSPAGVSSLKKNFPDFDQKDIKIGTFGSTTAQAVRDAGLRLDLEAPNVKSPSMTAAL 239
Query: 229 PL 230
L
Sbjct: 240 DL 241
>gi|165976434|ref|YP_001652027.1| uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165876535|gb|ABY69583.1| uroporphyrinogen-III synthase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 237
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/227 (11%), Positives = 62/227 (27%), Gaps = 18/227 (7%)
Query: 18 KIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSESLSTLPA------NF 67
+ + + PL E L + + S ++
Sbjct: 1 MLNQYQIFAIHQPLFTIEAGTELPQLPSVMSRLNTGDYVFAVSKHAIDFASETLIQTGFH 60
Query: 68 CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPR 127
R + + + +S N ++ ++ K ++ L +
Sbjct: 61 YRTDLKYFAVGRHSAAYFSAKTENPTYYPISSENSEGLLELPEMQILDGKNILILRAEKG 120
Query: 128 NFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAILFYARSSVLYFFSLP 185
F + ++ ++CY Q +A E D+I+ + ++ +
Sbjct: 121 RDFFAEQASLRGANIQYLECYRRQYLADSITEKMSLCKRAGIDSIIVTSTDILITLYEQT 180
Query: 186 ----LPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKETSLLK 226
I + +S IA N V ++ SLL+
Sbjct: 181 AEDDRQWLIECRLIVVSTRIAQLAYKLGWSRNKVLLSEKADNNSLLE 227
>gi|76801316|ref|YP_326324.1| uroporphyrinogen-III synthase [Natronomonas pharaonis DSM 2160]
gi|76557181|emb|CAI48756.1| uroporphyrinogen-III synthase [Natronomonas pharaonis DSM 2160]
Length = 239
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 62/237 (26%), Gaps = 17/237 (7%)
Query: 2 YIVITRPI-KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+ RP ++A+ + ++G P+ P+ + + +TS
Sbjct: 4 RVAFFRPDDERAVEAAVTVSELGAEPLSDPMLEVEPTGRT----PRDDAAYTILTSKTGA 59
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ + P + A + + IV + P +
Sbjct: 60 ELVADTGWQ--PGGELVAIGTATAGALEAAGFDVDRLPEEFSSSGIVSELEADAPGTRIE 117
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQNADAILFYARSSVL 179
+ D L++ + Y ++ + + F + +V
Sbjct: 118 VARSDHGSDVLTDGLVDAGGYVHETVLYRLVRPDGAGDSAVAAADGDLAGACFTSPLTVE 177
Query: 180 YFFSLPLP--------AKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
YF ++ A + + + A V V + +L +
Sbjct: 178 YFLEAAADRGCRDAALEGLNTAVVGAIGDPTREAAAEHGIEVDVVPGTAEFAALAEA 234
>gi|22045244|gb|AAL38830.2| unknown protein [Arabidopsis thaliana]
Length = 193
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 17/153 (11%), Positives = 43/153 (28%), Gaps = 5/153 (3%)
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
+ + + E + ++Y + L +
Sbjct: 28 EEAMKSADGLLHVAFTPSKATGKVLASELPEKVGKRSSVLYPASLKAGNDIVEGLSKRGF 87
Query: 141 PLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA-FLCLSN 199
+ ++ Y + + +T + +A + + S+V + L + + C+
Sbjct: 88 EVVRLNTYTTVPVQSVDTVLLQQALSAPVLSVASPSAVRAWLHLIQNEEQWSNYVACIGE 147
Query: 200 NIASAIPASYKNVVTVACFPK----ETSLLKLL 228
ASA V P S+++ L
Sbjct: 148 TTASAARRLGLKNVYYPEKPGLEGWVESIMEAL 180
>gi|159153096|gb|ABW93056.1| CG1885-PA [Drosophila melanogaster]
gi|159153098|gb|ABW93057.1| CG1885-PA [Drosophila melanogaster]
gi|159153100|gb|ABW93058.1| CG1885-PA [Drosophila melanogaster]
gi|159153102|gb|ABW93059.1| CG1885-PA [Drosophila melanogaster]
gi|159153104|gb|ABW93060.1| CG1885-PA [Drosophila melanogaster]
gi|159153106|gb|ABW93061.1| CG1885-PA [Drosophila melanogaster]
gi|159153108|gb|ABW93062.1| CG1885-PA [Drosophila melanogaster]
gi|159153110|gb|ABW93063.1| CG1885-PA [Drosophila melanogaster]
gi|159153112|gb|ABW93064.1| CG1885-PA [Drosophila melanogaster]
gi|159153114|gb|ABW93065.1| CG1885-PA [Drosophila melanogaster]
Length = 237
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 66/205 (32%), Gaps = 18/205 (8%)
Query: 41 VFLAMQQSYGAIAITSSESLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQI 92
L Y I TS + + + + +A+GE + LA
Sbjct: 10 AKLQNPDKYAGIIFTSPRCVEAVAESLNLGELPGGWKMLHNYAVGEVTHNLALSTLDQLF 69
Query: 93 FHGKD--NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
HGK N+ L IV+ PL+ G L E+ + + Y +
Sbjct: 70 THGKQTGNARALGDYIVDTFDGSRAL-PLLLPCGNLATDTLLSKLAENGFSVDACEVYET 128
Query: 151 QDIAYPETTMKNLLQNADAIL----FYARSS---VLYFFSLPLPAKISAAFLCLSNNIAS 203
+ ++ L+ + F++ S +F+ + + + +
Sbjct: 129 RCHPELGANVERALEIYGESIEFLAFFSPSGVNCAQQYFTSRQLSMDKWKLVAIGPSTRR 188
Query: 204 AIPASYKNVVTVACFPKETSLLKLL 228
A+ + + V A P L+K+L
Sbjct: 189 ALESLGQKVYCTAERPTVEHLVKVL 213
>gi|328703405|ref|XP_003242191.1| PREDICTED: uroporphyrinogen-III synthase-like [Acyrthosiphon pisum]
Length = 254
Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 69/229 (30%), Gaps = 14/229 (6%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSESLSTLPANF-- 67
++ GY ++P F + L Q Y + ITS + +
Sbjct: 24 DPYITILKNQGYKTQLVPTLEFEYHNFDALNQKLQKPQDYSGMVITSPRCARGIIQSLAG 83
Query: 68 ------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
+ PIF +GE++A L ++ + + + + L P
Sbjct: 84 SKLDENWKKKPIFVVGESTARLINKELGLEPIGADSGNATALIPTILKYELSKPLLAPCG 143
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
+ + I + ++ + N +++ ++F++ S
Sbjct: 144 NLNINILSNSIKSVKFENIEVYRTI--PHNNLKTNLNLVLNQIKDQIGVIFFSPSGFRAI 201
Query: 182 FSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L + +AI + + PK SLL+++
Sbjct: 202 LDLMPKKLFSQLHIFAIGPTTGAAIKEAGYILTGACEKPKPESLLEMIQ 250
>gi|195163203|ref|XP_002022441.1| GL13032 [Drosophila persimilis]
gi|194104433|gb|EDW26476.1| GL13032 [Drosophila persimilis]
Length = 284
Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/244 (18%), Positives = 79/244 (32%), Gaps = 19/244 (7%)
Query: 3 IVITRPIKKALR-TQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ---SYGAIAIT-SS 57
++I + + E + + PV +P F Q Y I S+
Sbjct: 8 VIIFKSESDSTDVYAETLLGHNFNPVFVPTLCFGFKNLQELGNKLQTPDKYAGIIFHQST 67
Query: 58 ESLSTLP----ANFCRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKV 111
L + +A+GE + LA HGK N+ NL + IV+
Sbjct: 68 AVNEALLLGELPGGWKLLHNYAVGEVTHNLALSTLQQLFTHGKQTGNARNLGEYIVDTFD 127
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
PL+ G L E+ + + Y ++ ++ L+ A +
Sbjct: 128 GSRDL-PLLLPCGNLATDTLLSKLAENGFCVDACEVYETKCSPQLGECVERALKEAGDSV 186
Query: 172 ----FYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
F++ S V IS + + + A+ + + V A P L
Sbjct: 187 EFLAFFSPSGVACAMEYFRAHNISLEPWKLVAIGPSTRRALESQGQKVYCTAERPTVEHL 246
Query: 225 LKLL 228
+K+L
Sbjct: 247 VKVL 250
>gi|15805812|ref|NP_294510.1| uroporphyrinogen-III synthase [Deinococcus radiodurans R1]
gi|6458497|gb|AAF10363.1|AE001933_7 uroporphyrinogen-III synthase, putative [Deinococcus radiodurans
R1]
Length = 257
Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 69/238 (28%), Gaps = 14/238 (5%)
Query: 3 IVITRP----IKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAI 54
+ +TRP R E ++ G + +PL F+ + L + + +
Sbjct: 14 VAVTRPDSGGDGGGGRLGELLRAQGAEVLSVPLIRFLPPADPRALWSGLRDLRGVDWLLV 73
Query: 55 TSSESLSTLPANFCRH---TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
TS + L A ++ + + + +K+
Sbjct: 74 TSPQGGRLLGEALAAAGVADLAGTRLAAVGEATARELRARGLPVDFLPTTATALSLGRKL 133
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
P + ++L + L + R ++ Y++ + L A+
Sbjct: 134 PAQPGQAALHLTSQLSENTLRGELAARGVTYRRLELYHTAPAVLNAAE-RVALAGVSAVT 192
Query: 172 FYARSSVLYFFSLPLPA--KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ S+ +L P + + A+A VT A P L+
Sbjct: 193 LASGSAAQGLAALAGPDFDPLRLPVAAIGEQTAAAAWTLGFVSVTTAPQPSLEGLVAA 250
>gi|33152756|ref|NP_874109.1| uroporphyrinogen III synthase [Haemophilus ducreyi 35000HP]
gi|33148980|gb|AAP96498.1| possible uroporphyrinogen III synthase [Haemophilus ducreyi
35000HP]
Length = 251
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 69/240 (28%), Gaps = 15/240 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M ++IT P +A + + Q+ + P+ + + L + + I S
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLLDLPSAMSRLNAGDNVIILS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLA-----RQKGFTQIFHGKDNSINLAKIIVEQKV 111
E+ + T ++ +++ K+
Sbjct: 61 KEAFDFAWQTLADTGFAYRADLNYFVADKYLAAYVTAKTTRPVHYPDTEQCNQLLQLGKL 120
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
L K ++ L + + F++ L E K + Y+ D IL
Sbjct: 121 LQLTDKKVLILCAEEQRGLFQNQLAEAKQVQYLACYYHKHIEQLTAQLSLAKRAGIDTIL 180
Query: 172 FYARSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKN--VVTVACFPKETSLL 225
+L + + + +S +IA+ V +A +LL
Sbjct: 181 IENEDVLLTLYEQIAAEDCQWLVKTRLVVISQHIANIAEKLGWQSDQVIIAGQTDNQTLL 240
>gi|213962979|ref|ZP_03391238.1| uroporphyrinogen-III synthase [Capnocytophaga sputigena Capno]
gi|213954320|gb|EEB65643.1| uroporphyrinogen-III synthase [Capnocytophaga sputigena Capno]
Length = 249
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 64/244 (26%), Gaps = 22/244 (9%)
Query: 1 MY---IVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAI 52
M I++++P KA + IQ +P + A+
Sbjct: 1 MKVKSILVSQPEPKAENSPYAQIIQNHNVKVDFVPFIKVEGMTAKDIRMQKIDLTKFTAV 60
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS +S+ F EA A ++ + A +
Sbjct: 61 ILTSRKSVDHYFRIAEEMRFKVPITMKYFCQSEAIAYYLQKYITYRKRKIYVGKKEFADL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + ++ G L E KI + Y +
Sbjct: 121 L--PILKKYKDEKFLFPGSDAPKPEATAALDEIKIKWERVVFYRTVYCDISA----IKEN 174
Query: 166 NADAILFYARSSVLYFFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D + F++ + + F + + A + + A P+ S+
Sbjct: 175 KYDILTFFSPAGIEALFKSFPDFSQKKTKIAVYGDATLKAAEEAGLIIDIKAPSPESPSM 234
Query: 225 LKLL 228
L
Sbjct: 235 TVAL 238
>gi|124027710|ref|YP_001013030.1| uroporphyrinogen-III synthase [Hyperthermus butylicus DSM 5456]
gi|123978404|gb|ABM80685.1| Uroporphyrinogen-III synthase [Hyperthermus butylicus DSM 5456]
Length = 249
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/236 (10%), Positives = 66/236 (27%), Gaps = 13/236 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL--AMQQSYGAIAITSSESL 60
I++ RP + + ++GY+ +P+ + +V + I TS +
Sbjct: 11 ILLLRP-PDSQP--GPLAEIGYVA-HIPIVEVVARSGAVEEVARLLGGCDWIVFTSPRAP 66
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI----NLAKIIVEQKVLFTPQ 116
L + G + + + V +++
Sbjct: 67 RFLAKLLPEIRRLQEQGRLHVAVVGPRTANVLSEAGLRVDLVPGEYRGKAVAEELRRRNP 126
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ ++ + L + +R++ Y ++ + ++ D ++F + S
Sbjct: 127 RCVLIPRSAAAEHNDFMLLQSMGVEVRIVHLYTAKPVERLARIAASIADEFDYVVFTSPS 186
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKETSLLKLLPL 230
V + +A+ S VA L + +
Sbjct: 187 IVQTLARHY-NGSYKFTAAVIGPTTLAALKESKLARARTIVAEKYTMDGLAEAIRR 241
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 13/110 (11%), Positives = 31/110 (28%), Gaps = 5/110 (4%)
Query: 127 RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPL 186
R + + + I + + LL D I+F + + + L
Sbjct: 15 RPPDSQPGPLAEIGYVAHIPIVEVVARSGAVEEVARLLGGCDWIVFTSPRAPRFLAKLLP 74
Query: 187 -----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ + A+ + + V V + ++ + L R
Sbjct: 75 EIRRLQEQGRLHVAVVGPRTANVLSEAGLRVDLVPGEYRGKAVAEELRRR 124
>gi|307352551|ref|YP_003893602.1| uroporphyrinogen III synthase HEM4 [Methanoplanus petrolearius DSM
11571]
gi|307155784|gb|ADN35164.1| uroporphyrinogen III synthase HEM4 [Methanoplanus petrolearius DSM
11571]
Length = 231
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 73/232 (31%), Gaps = 17/232 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIP-VMMPL---SYFIHDRESVFLAMQQSYGAIAITS 56
M I +TR +KA + E ++ G+ ++ PL Y E V A + + I TS
Sbjct: 1 MRIAVTRLREKAGKDAETCKRYGHECYIVSPLNARIYEDAVMEFVSAANRDEFDCIFFTS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + AIG +A + GF S + A + +
Sbjct: 61 ALPAQVIGPLLQVRPRMVAIGPQTAKTLTEMGFDCETLPDFYSRDFAPYLGDWIR----G 116
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K + N D + + Y + K L ADA+LF +
Sbjct: 117 KRIGIPRADVPNPQLIDSIEDKGGIAAETRIYGLEPTGE-----KLDLDGADAVLFTSAG 171
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
S F + + + + A+ S T L+ L
Sbjct: 172 S---FRNAVWDKDQKILRVAIGDVTGKAMELSGCPPDVTGDG-SLTGTLEAL 219
>gi|159153116|gb|ABW93066.1| CG1885-PA [Drosophila melanogaster]
gi|159153118|gb|ABW93067.1| CG1885-PA [Drosophila melanogaster]
Length = 237
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 66/205 (32%), Gaps = 18/205 (8%)
Query: 41 VFLAMQQSYGAIAITSSESLSTLPANF--------CRHTPIFAIGEASACLARQKGFTQI 92
L Y I TS + + + + +A+GE + LA
Sbjct: 10 AKLQNPDKYAGIIFTSPRCVEAVAESLNLGELPGGWKMLHNYAVGEVTHNLALSTLDQLF 69
Query: 93 FHGKD--NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
HGK N+ L IV+ PL+ G L E+ + + Y +
Sbjct: 70 THGKQTGNARALGDYIVDTFDGSRAL-PLLLPCGNLATDTLLSKLAENGFSVDACEVYET 128
Query: 151 QDIAYPETTMKNLLQNADAIL----FYARSS---VLYFFSLPLPAKISAAFLCLSNNIAS 203
+ ++ L+ + F++ S +F+ + + + +
Sbjct: 129 RCHPELGANVERALEIYGESIEFLAFFSPSGVNCAHQYFTSRQLSMDKWKLVAIGPSTRR 188
Query: 204 AIPASYKNVVTVACFPKETSLLKLL 228
A+ + + V A P L+K+L
Sbjct: 189 ALESLGQKVYCTAERPTVEHLVKVL 213
>gi|120437549|ref|YP_863235.1| uroporphyrinogen-III synthase [Gramella forsetii KT0803]
gi|117579699|emb|CAL68168.1| uroporphyrinogen-III synthase [Gramella forsetii KT0803]
Length = 216
Score = 71.4 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 18/209 (8%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAI 76
E + G V + + ++ TS ++ + + F +
Sbjct: 16 ELLLNSGIGFVEYDAISIKSIDFDLKKEVFEN---TIFTSKNAVRAIQGKDIKIKNCFCV 72
Query: 77 GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLI 136
GE +A +KGF+ + + + + ++ + +K + G R L
Sbjct: 73 GEKTATFLNEKGFSVLETADNGTD-----LAQKIIQKHREKQFHFFCGNKRREELPQLLK 127
Query: 137 EHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLC 196
+ I L Y + K + D ILF++ S+V F KI++ C
Sbjct: 128 KSNIQLSETVVYKTALNP------KKFESHFDGILFFSPSAVQSF---TKKNKINSIAFC 178
Query: 197 LSNNIASAIPASYKNVVTVACFPKETSLL 225
+ A+ + V +A P +++
Sbjct: 179 IGETTANEVKKH-SENVVIASKPSIENVI 206
>gi|323495299|ref|ZP_08100380.1| uroporphyrinogen-III synthase [Vibrio brasiliensis LMG 20546]
gi|323310476|gb|EGA63659.1| uroporphyrinogen-III synthase [Vibrio brasiliensis LMG 20546]
Length = 198
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 53/190 (27%), Gaps = 11/190 (5%)
Query: 50 GAIAITSSESLSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAK 104
I S +++ + + + +Q +
Sbjct: 2 DIIIAVSQHAVTASNHFLSQLSRTWPSHPIYLAVGQKTAHVLSKVSQQKVHYPEISDSEH 61
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ ++ K ++ L G D L + + + Y +++A+ + +
Sbjct: 62 LLKLDELQNVTNKKILILRGNGGRELIFDTLATREASVEYREVYKRENLAFRSDLLVPIW 121
Query: 165 QNADA--ILFYARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACF 218
Q+ + ++ + + YF S + S IA VVT
Sbjct: 122 QDENINQLVITSSGQLDYFISQFTKEHLDWLFTLHLYVPSERIAQQAREVGFKVVTNTFS 181
Query: 219 PKETSLLKLL 228
LL L
Sbjct: 182 ASNQVLLAAL 191
>gi|89067495|ref|ZP_01155008.1| hypothetical protein OG2516_11661 [Oceanicola granulosus HTCC2516]
gi|89047064|gb|EAR53118.1| hypothetical protein OG2516_11661 [Oceanicola granulosus HTCC2516]
Length = 235
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 14/228 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIP--VMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+++TRP A R E +Q ++ PL +H GA+ +TS+
Sbjct: 8 LLVTRPAPAAERFAEAVQARVGPVQSLISPLQEIVHCD----PGPLPEAGALVLTSANGA 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ + +A G A +V P PL+
Sbjct: 64 AAADRLGLGGEAWCVGPQTAAAARAAGLEAVAAEGD------ADSLVALLRARRPAGPLL 117
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSVL 179
+L G L E +P Y + L +A ++ ++ S
Sbjct: 118 HLRGAHARGDVARRLTEAGLPCAERVVYRQEPRPPTPQAWALLRGDAPLVVPLFSPRSAA 177
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F +L + +S A + A VA P+ ++L L
Sbjct: 178 LFAALTPIDAP-LHLVAISAATAGPLAALASRECRVAPAPEGEAVLAL 224
>gi|256820305|ref|YP_003141584.1| Uroporphyrinogen III synthase HEM4 [Capnocytophaga ochracea DSM
7271]
gi|256581888|gb|ACU93023.1| Uroporphyrinogen III synthase HEM4 [Capnocytophaga ochracea DSM
7271]
Length = 227
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 86/215 (40%), Gaps = 18/215 (8%)
Query: 27 VMMP--LSYFIHDR-ESVFLAMQQSYGAIAITSSESLSTLPANFC----RHTPIFAIGEA 79
++P L + +++ Y + +TS ++ +L + + TP+ +GE
Sbjct: 19 SVLPIHLIEHNFITVSPITMSLTPPYDLLIVTSQNAVKSLSRHPLATTLKETPVLCVGEQ 78
Query: 80 SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHK 139
+ L Q GF + + +L + + + + + G R ++ +E+
Sbjct: 79 TQQLLTQNGFNVLHFA-HYASDLVQHLQQNLASLKKLTSIAFFAGTQRLNTLPNFFVENN 137
Query: 140 IPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSN 199
+ ++ I Y ++ + +NA AILFY+ S V + S C+
Sbjct: 138 LKVKEITAYKTEYTP------IEIKENASAILFYSPSGVESYCSCNTLTAEQ-QIFCIGK 190
Query: 200 NIASAIPASYK---NVVTVACFPKETSLLKLLPLR 231
A A+ +K + ++ P SLL++L ++
Sbjct: 191 TTAEAVKNRFKNQTKNIILSPIPTVKSLLEILSIK 225
>gi|15897135|ref|NP_341740.1| uroporphyrinogen III synthase, putative [Sulfolobus solfataricus
P2]
gi|284174378|ref|ZP_06388347.1| uroporphyrinogen III synthase, putative [Sulfolobus solfataricus
98/2]
gi|13813318|gb|AAK40530.1| Uroporphyrinogen III synthase, putative [Sulfolobus solfataricus
P2]
gi|261601799|gb|ACX91402.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus solfataricus 98/2]
Length = 237
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 70/236 (29%), Gaps = 17/236 (7%)
Query: 1 MYIVITRPIKKALRTQEK---IQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M ++ RP + EK ++K G + +P+ S Y A+A TS
Sbjct: 1 MRVLFLRPDNEDNELNEKLMILRKNGIEVLNIPIFKIKCVSYS---LPTYDYEALAFTSR 57
Query: 58 ESLSTLPAN--FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
S+ I+AIGE +A L + + + + ++ +
Sbjct: 58 NSVICFKDRTLIKNVHKIYAIGEETAELLMKMYNVNPITPERFTSI---ELAKRILEDKV 114
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFY 173
L K ++ KI I Y S+ I + +L + I F
Sbjct: 115 NSILSIRSRKASEDM--RNILNGKIKYDEIYVYDSEIIRDNINEISKILTECEVDAIAFT 172
Query: 174 ARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV-VTVACFPKETSLLKLL 228
+ K + + + V + + +++ +
Sbjct: 173 SSLMAKLIGPFIR-GKCNIIIFSIGPMTTETLKRVNNKVKIIESKTHSIKGIIETI 227
>gi|319638047|ref|ZP_07992811.1| uroporphyrinogen-III synthase [Neisseria mucosa C102]
gi|317400692|gb|EFV81349.1| uroporphyrinogen-III synthase [Neisseria mucosa C102]
Length = 707
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 64/236 (27%), Gaps = 16/236 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSESL 60
++I RP + + + G+ ++ DR + + + S ++
Sbjct: 4 LLIIRPSNRPQQDIQTCHAAGWQAQVLSPIEIEADRSGLNKLPEQFKQADVVFWVSPTAI 63
Query: 61 STLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII-VEQKVLFTPQK 117
T + ++ + ++ + ++ + P
Sbjct: 64 ETAAPHLNFSDGPKAHITVGQTSQHTLAQFSPYPVFSPEDGNDSEAVLRMPIWKNLPPNA 123
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + G + D L + + Y+ + A K ++ A +
Sbjct: 124 RVLIIRGHGGRDYLADKLSALGFQIDFAEIYFRRPHAIDWQHFKT--EDIAAAYVTSGEL 181
Query: 178 VLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
FF P S + IA A+ V TSL L
Sbjct: 182 AREFFHQIPPQFSRFFESLLYFTHHPRIADALRIVGAKHVE-----TVTSLSAALS 232
>gi|255065152|ref|ZP_05317007.1| uroporphyrinogen-III synthase [Neisseria sicca ATCC 29256]
gi|255050573|gb|EET46037.1| uroporphyrinogen-III synthase [Neisseria sicca ATCC 29256]
Length = 243
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 70/235 (29%), Gaps = 16/235 (6%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSESLS 61
+I RP +A + G+ ++ D ++ A+ S ++
Sbjct: 5 LIVRPSARAGDDVRTCSQAGWRARVLSPVEIEPDEAALRGLKEQFSRADAVFWVSPTAVE 64
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T + +AS ++ G + ++ + + A + +
Sbjct: 65 TAAPYVDFSDDLKVQVAVGQASGQALQRCGAKNVSVPQEGNDSEAVLRLPVWDTLPQGAR 124
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ + G+ + L + + + + Y+ + ++ DA + V
Sbjct: 125 VLIVRGRGGRDFLAESLKKKGFAVEIAEAYFRRPNGLNWQDFDA--ESIDAAFIASGELV 182
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
FS P S + IA A+ + + V SL L
Sbjct: 183 RGLFSQVPPQFSRFFESLLYFTHHPRIADALREAGARHIRV-----VASLKAALS 232
>gi|33593519|ref|NP_881163.1| putative uroporphyrinogen-III synthase [Bordetella pertussis Tohama
I]
gi|33572875|emb|CAE42811.1| putative uroporphyrinogen-III synthase [Bordetella pertussis Tohama
I]
gi|332382927|gb|AEE67774.1| putative uroporphyrinogen-III synthase [Bordetella pertussis CS]
Length = 262
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/230 (8%), Positives = 55/230 (23%), Gaps = 25/230 (10%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD-RESVFLAMQQSYGAIAITSSESLST 62
++TRP + +++ G+ + +P E+ + + + Y + S +
Sbjct: 6 ILTRPQGRNGALAQRLHDAGWQTLCLPALRIEPLPPENGVVPLPRDYDLVVFVSGNAARL 65
Query: 63 LPANFCRHTPIFAIGEASACL--------------ARQKGFTQIFHGKDNSINLAKIIVE 108
+ A A + + +
Sbjct: 66 YLEQLRERGELPWPAGAVAATVGPASARALLDSGQFGADTTVLHPAETAPTHDSEALWAL 125
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-----TMKNL 163
+ + + + G D L+ + + Y + + + L
Sbjct: 126 LRARPALPRRALLVRGTQGRDWLADRLVAAGVEVSRHAVYRRRPAPWAQEGRQRLRDWAL 185
Query: 164 LQNADAILFYARSSVLYFF-----SLPLPAKISAAFLCLSNNIASAIPAS 208
L + + L + F+ +A + A
Sbjct: 186 AGERPTWLLTSGEGIDALVQGLREEQLLDWWLQGRFVVTHPVLAERLRAL 235
>gi|269126641|ref|YP_003300011.1| Uroporphyrinogen III synthase HEM4 [Thermomonospora curvata DSM
43183]
gi|268311599|gb|ACY97973.1| Uroporphyrinogen III synthase HEM4 [Thermomonospora curvata DSM
43183]
Length = 390
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/247 (8%), Positives = 53/247 (21%), Gaps = 31/247 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY------GAIAITSSESLSTLPAN 66
+++ G V P + + L + + +T++
Sbjct: 22 EELAALLERRGARVVHAPAIRLVPLADDAELLHATNVCIADRLDYVVVTTAIGFRAWLET 81
Query: 67 ----------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
R + + +S + +++
Sbjct: 82 ADGWGLRDALIERLHKARILARGPKARGAIRSAGLQEEWSPDSESCQELLRHLLAEDLTG 141
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----NLLQNADAILF 172
+ F L + + Y + + DAI F
Sbjct: 142 TRIAVQLYGEPLPDFTGALRAAGAEVIEVPVYRWSRTDDSTPLRRLVGQAVAGTIDAITF 201
Query: 173 YARSSVLYFFSLPLPAKIS----------AAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ +V ++ + C+ A + V +
Sbjct: 202 TSAPAVTATLAVAAEDGLEEALLEALRTHTVAACVGPVTAQPLTDRGVPTVQ-PERARIG 260
Query: 223 SLLKLLP 229
+L++ L
Sbjct: 261 ALVRALA 267
>gi|332876588|ref|ZP_08444348.1| uroporphyrinogen-III synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332685421|gb|EGJ58258.1| uroporphyrinogen-III synthase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 249
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 65/244 (26%), Gaps = 22/244 (9%)
Query: 1 MY---IVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAI 52
M I++++P KA + I+ +P + AI
Sbjct: 1 MKVKSILVSQPEPKAENSPYSQIIENHNVKVDFVPFIKVEGMTAKDIRMQKIDLTKFSAI 60
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS +S+ F EA A ++ + +++
Sbjct: 61 ILTSRKSVDHYFRIAEEMRFKVPDTMKYFCQSEAIAFYLQKYITYRKRKIYVGKKEFSEL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + ++ G L + KI + Y +
Sbjct: 121 L--PILKKYKDENFLFPGSDSPKPEATAALNDLKIKWERVVFYRTVYCDISA----IKNN 174
Query: 166 NADAILFYARSSVLYFFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D + F++ + + F + + A + + A P+ S+
Sbjct: 175 KYDILTFFSPAGIEALFKSFPDFSQKKTKIAVYGDATLKAAEEAGLVIDIKAPSPESPSM 234
Query: 225 LKLL 228
L
Sbjct: 235 TVAL 238
>gi|257387164|ref|YP_003176937.1| uroporphyrinogen-III synthase [Halomicrobium mukohataei DSM 12286]
gi|257169471|gb|ACV47230.1| Uroporphyrinogen III synthase HEM4 [Halomicrobium mukohataei DSM
12286]
Length = 250
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 67/243 (27%), Gaps = 26/243 (10%)
Query: 1 MY------IVITRPI-KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIA 53
M + + RP ++ + E ++ +G PV P+ + + +
Sbjct: 1 MREEPRLSVAVFRPDDERTTQAVELLESLGADPVPDPMLAVEATGAT----PRSDADYVV 56
Query: 54 ITSSESLSTLPANFCRH--TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+TS + + AIG +A + G+ ++ S +V
Sbjct: 57 LTSKTGVELATEAGWDPGDATVCAIGRPTADVLEDAGYAVDLVPEEYSSTG---LVAALE 113
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM-KNLLQNADAI 170
+ + D L + Y + + + DA
Sbjct: 114 ESVDGARVEVARSDHGSAVLTDGLEAAGAYVHETILYRLVRPEGAGASTERAAAGDLDAA 173
Query: 171 LFYARSSVLYFFSLPLPAKISAAFL---------CLSNNIASAIPASYKNVVTVACFPKE 221
LF + +V +F + I A + + + +V V
Sbjct: 174 LFTSSLTVRHFLAAADERGIRADAVEGLNDAVVGAIGEPTRQTATDAGIDVDVVPDTADF 233
Query: 222 TSL 224
+L
Sbjct: 234 ETL 236
Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 5/92 (5%)
Query: 142 LRVIDCYYSQDIAYP----ETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCL 197
+ +++ + + P E T +AD ++ +++ V A +
Sbjct: 23 VELLESLGADPVPDPMLAVEATGATPRSDADYVVLTSKTGVELATE-AGWDPGDATVCAI 81
Query: 198 SNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
A + + V V T L+ L
Sbjct: 82 GRPTADVLEDAGYAVDLVPEEYSSTGLVAALE 113
>gi|213963099|ref|ZP_03391357.1| uroporphyrinogen-III synthase [Capnocytophaga sputigena Capno]
gi|213954183|gb|EEB65507.1| uroporphyrinogen-III synthase [Capnocytophaga sputigena Capno]
Length = 221
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 71/205 (34%), Gaps = 15/205 (7%)
Query: 27 VMMPLSYFIHDRESVFLAMQQ-SYGAIAITSSESLSTLPANFC----RHTPIFAIGEASA 81
+ M L ++ Y + TS ++ ++ + ++ + +GE +A
Sbjct: 21 INMQLIEHNFISVNLLPIKLTLPYNLLIFTSQNAVKSVLQHPLATALKNNLVLCVGERTA 80
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
L + GFT + L K + + F + + G R + ++
Sbjct: 81 QLLEKSGFTVRCSFDYATD-LTKYLSDNLKEFKKMHRIAFFAGTQRLETLPQFFAKYLPN 139
Query: 142 LRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNI 201
+ I Y ++ P + + D ILF++ S V + S + C+ +
Sbjct: 140 VEEITAYQTELTPIP------IHKKVDGILFFSPSGVESYHSCNPAGEE--KAFCIGDTT 191
Query: 202 ASAIPASYKNVVTVACFPKETSLLK 226
A A V +A P ++L
Sbjct: 192 AKAAQRY-WKDVVIAEKPTIENVLA 215
>gi|237720661|ref|ZP_04551142.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|315920994|ref|ZP_07917234.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|229450412|gb|EEO56203.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|313694869|gb|EFS31704.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 248
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 66/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKISILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + + ++
Sbjct: 65 RHAIDHFFTLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLIPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + N ++ L ++ I Y + + + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHNDDVKNLLDKNNIQHTEAVMYRTVSNDFTPDE----EFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGVTSLKKNFPDFNQKEIKIGTFGSTTAQAVRDAGLRLDLEAPTVQAPSMTAAL 239
>gi|167814760|ref|ZP_02446440.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei 91]
Length = 506
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 58/246 (23%), Gaps = 36/246 (14%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSESLSTLPANFCRHTP 72
++ G + PL + A +Y + S ++ A P
Sbjct: 1 AQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNAVDHALARLGAIWP 60
Query: 73 IF--------------AIGEASACLARQKGFTQIFHGKDNSINLAKIIVE-----QKVLF 113
A +A R + G + + + E
Sbjct: 61 HPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESLFAEIARAFNGEAK 120
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----NADA 169
K ++ + G + L E + ++ Y + + A
Sbjct: 121 LAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAWERVHALLSGAPHA 180
Query: 170 ILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPASYKNVVTVACFPKE 221
L + V L F+ + I A + +T+ +
Sbjct: 181 WLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARALGFDRITLT-GAGD 239
Query: 222 TSLLKL 227
+++
Sbjct: 240 ERIVRA 245
>gi|295132366|ref|YP_003583042.1| uroporphyrinogen-III synthase [Zunongwangia profunda SM-A87]
gi|294980381|gb|ADF50846.1| uroporphyrinogen-III synthase [Zunongwangia profunda SM-A87]
Length = 248
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 61/244 (25%), Gaps = 22/244 (9%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAI 52
M I++++P + E +K +P + + AI
Sbjct: 1 MKVKTILVSQPEPKVENSPYFELEEKQKVKVDFIPFIHVEGVSSKEVRQQKVDLSKHTAI 60
Query: 53 AITSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ F + EA A ++ + A++
Sbjct: 61 ILTSRNAVDHFFRVAEEMRFKVPDSLKYFCLSEAVAYYLQKYVVYRKRKIYVGKRTFAEL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + L + + + Y +
Sbjct: 121 --SPLIKKYKNEKFLLPSSDMLKPVIPKTLDKLGVQWKQAVFYKTVVSDLS----HLSDV 174
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + F K + N A V A + S+
Sbjct: 175 TYDILVFFSPSGIKSLFENFPDFKQNDTRIAVFGNTTIKAAKEHGLTVNIKAPTSETPSM 234
Query: 225 LKLL 228
L
Sbjct: 235 TMAL 238
>gi|315223336|ref|ZP_07865195.1| uroporphyrinogen-III synthase [Capnocytophaga ochracea F0287]
gi|314946667|gb|EFS98656.1| uroporphyrinogen-III synthase [Capnocytophaga ochracea F0287]
Length = 227
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 88/224 (39%), Gaps = 18/224 (8%)
Query: 18 KIQKMGYIPVMMP--LSYFIHDR-ESVFLAMQQSYGAIAITSSESLSTLPANFC----RH 70
Q+ I ++P L + +++ Y + +TS ++ +L + +
Sbjct: 10 LFQEQKAILSVLPIHLIEHSFITVSPITMSLTPPYDLLIVTSQNAVKSLSQHPLATTLKK 69
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
TP+ +GE + L Q GF + + +L + + + + + G R
Sbjct: 70 TPVLCVGEQTQQLLTQNGFNVLHFA-HYASDLVQYLQQNLTSLKKLTSIAFFAGTQRLNT 128
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI 190
++ +E+ + ++ I Y ++ + +NA AILFY+ S V + S
Sbjct: 129 LPNFFVENNLKVKEITAYKTEYTP------IEIKENASAILFYSPSGVESYCSCNTLTAE 182
Query: 191 SAAFLCLSNNIASAIPASYKN---VVTVACFPKETSLLKLLPLR 231
C+ A A+ KN + + P SLL++L ++
Sbjct: 183 Q-QIFCIGKTTAEAVKNRLKNQTENIILPPIPTVKSLLEILSIK 225
>gi|299533188|ref|ZP_07046572.1| uroporphyrinogen-III synthase [Comamonas testosteroni S44]
gi|298718718|gb|EFI59691.1| uroporphyrinogen-III synthase [Comamonas testosteroni S44]
Length = 281
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/277 (10%), Positives = 66/277 (23%), Gaps = 50/277 (18%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----------LAMQQSYGA 51
I++TRP+ A + + G +PL + Y A
Sbjct: 3 RILVTRPLHDAKPWVDAFRARGLQAEALPLIGIGPCTDPAAHQALLRARQLALKPGHYRA 62
Query: 52 IAITSSESLSTLPAN-----------FCRHTPIFAIGEASACLARQKGFTQIFH----GK 96
+ S ++ A T + G + + G +
Sbjct: 63 VMFVSGNAVQYFFARGQTPAFDAEALLAPDTRAWTPGPGTERALLEAGLASLQMDGPSPD 122
Query: 97 DNSINLAKIIVEQKVLFTPQKPLIYLG--------------------GKPRNFHFEDYLI 136
+ P ++ + L
Sbjct: 123 ATQFESEALWQNVHGQVRPGDRVLIVRGTSPATAPVADNAGMPIPSTQGAGRDWLATRLR 182
Query: 137 EHKIPLRVIDCYYSQDIAYPETTM---KNLLQNADAILFYARSSVLYFFSLPLPAKISA- 192
E + ++ Y Q + + + ++ LF + +V L + +
Sbjct: 183 EAGAEVELLAVYERQLPVWTAQQLDLARQAASDSSLWLFSSSEAVANLQQLLPQQQWHSG 242
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L IAS ++ V + P ++ +
Sbjct: 243 LALTTHERIASKALSAGFGRVLHS-RPSLDDVVASIE 278
>gi|308809894|ref|XP_003082256.1| DNA replication licensing factor, MCM5 component (ISS) [Ostreococcus
tauri]
gi|116060724|emb|CAL57202.1| DNA replication licensing factor, MCM5 component (ISS) [Ostreococcus
tauri]
Length = 1327
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 19/223 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIAITSSES 59
+V TR K ++ G V +PL + ++ L + + + +TS E+
Sbjct: 964 VVCTRESGKNGALMNMLKARGVRCVELPLVEAVPGEDADGLPDVLTRERWDWVCVTSPEA 1023
Query: 60 LSTLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + + +G A+ + + K + A + L
Sbjct: 1024 AKVFLDAYVKAGRPEGVRVAVVGAATGKVLTKAEPEAFAAEKQFIPSKATAVTLAAELPC 1083
Query: 115 PQKP-LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
Q ++Y K +D L + ++ Y ++ + AD + F
Sbjct: 1084 DQGSLILYPASKKAATTLQDGLEARGAMVVRLNTYSTERVETLRAEDIADAVCADVVTFG 1143
Query: 174 ARSSVLYFFSLPLPAK----------ISAAFLCLSNNIASAIP 206
+ S+V + L A + A++C+ A A
Sbjct: 1144 SPSAVHAWVELCGQALYDRLTADQDALQPAYVCIGETSAEACA 1186
>gi|253569022|ref|ZP_04846432.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298387004|ref|ZP_06996558.1| uroporphyrinogen-III synthase [Bacteroides sp. 1_1_14]
gi|251841041|gb|EES69122.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298260154|gb|EFI03024.1| uroporphyrinogen-III synthase [Bacteroides sp. 1_1_14]
Length = 248
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/240 (10%), Positives = 66/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKVSILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + + +V
Sbjct: 65 RHAIDHFFNLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLVPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + N ++ L ++ I Y + + + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHNDDVKNLLDKNNIQHTEAVMYRTV----SNDFTSDEEFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGVTSLKKNFPDFDQKEIRIGTFGSTTAQAVRDAGLRLDLEAPTVQAPSMTAAL 239
>gi|189464685|ref|ZP_03013470.1| hypothetical protein BACINT_01029 [Bacteroides intestinalis DSM
17393]
gi|189436959|gb|EDV05944.1| hypothetical protein BACINT_01029 [Bacteroides intestinalis DSM
17393]
Length = 250
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 66/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + QK G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAQKYGVKIDFRPFIKVESLSAKEFRQQKVSILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ + F + EA A ++ + + + ++
Sbjct: 65 RHAIDHFFHLCTELRVSIPETMKYFCVTEAVALYIQKYIQYRKRKIFFGNTGKFEDLLPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + + ++ L + KI Y + + D
Sbjct: 125 IIK-HKTEKYLVPMSDVHTDEIKNLLEKSKIQHTETVMYRTV----SNDFTAEEEFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGVTSLKKNFPDFQQKEIKIGTFGSTTAQAVRDAGLRLDLEAPSVQAPSMTAAL 239
>gi|298674277|ref|YP_003726027.1| uroporphyrinogen III synthase HEM4 [Methanohalobium evestigatum
Z-7303]
gi|298287265|gb|ADI73231.1| Uroporphyrinogen III synthase HEM4 [Methanohalobium evestigatum
Z-7303]
Length = 275
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 63/254 (24%), Gaps = 33/254 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-----MQQSYGAIAITSS 57
I I RP ++ Q+ G+ P+ + +++ F + + TS+
Sbjct: 15 IAIMRPEMYLNKSVILAQEYGFETFSAPMIEIVDKKDACFDDFVYRVLNGKSDYVIFTSA 74
Query: 58 ESLSTLPANFCRHTP-----------IFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ + AIG + G I ++ +
Sbjct: 75 NGIDFTLNKISDEIKQEFLVALNNTNVLAIGPNTQKALEDTGIECIDLPD---SYSSEGV 131
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM---KNL 163
V+ L+ K + + + LI + + Y L
Sbjct: 132 VDYLSLYVEGKTIDIARSSHGSKYLISGLINNGATVFETQVYTLNTPDNITQKNLIRCAL 191
Query: 164 LQNADAILFYARSSVLYFFSLPLP-----------AKISAAFLCLSNNIASAIPASYKNV 212
N F + V FF+ + AS + V
Sbjct: 192 AGNISVFAFTSSMIVHNFFTKANDVEAEDRIIEILNSNDTTVAAIGTPTASTLKNYGVKV 251
Query: 213 VTVACFPKETSLLK 226
V ++L
Sbjct: 252 DIVPEKYLFENMLA 265
>gi|121595212|ref|YP_987108.1| uroporphyrinogen-III synthase [Acidovorax sp. JS42]
gi|120607292|gb|ABM43032.1| uroporphyrinogen-III synthase [Acidovorax sp. JS42]
Length = 272
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/261 (12%), Positives = 62/261 (23%), Gaps = 40/261 (15%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV-------FLAMQQSYGAIAITS 56
++TRP ++A + +Q G + +PL A Y A+ S
Sbjct: 9 IVTRPAREATQWAADLQARGIAALALPLIAIGPVTNPALREELQQARARMDRYCAVMFVS 68
Query: 57 SESLSTLPANFCR-----------HTPIFAIGEASACLARQKGFTQIFH----GKDNSIN 101
+ + T ++A G + Q G +
Sbjct: 69 GNAAQYFFESNMPLTLSGQALAAIKTRVWAPGPGTVAALVQAGVAPERIDAPGADAAQFD 128
Query: 102 LAKIIVEQKVLFTPQKPLIYLG--------GKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
+ P ++ + G + + + Y
Sbjct: 129 SEALWQVVAPQIGPGDRVLIVRGANAPTAEGGNGREWLARQIAAAGGAVDFVAAYERGAP 188
Query: 154 AYPETTM---KNLLQNADAILFYARSSVLYFFS-LPLPAKISAAFLCLSNNIASAIPASY 209
+ + + L + ++ + LP A L IA A A+
Sbjct: 189 CLDAQQLVLAQAAASDGSVWLLSSSEAIANLRAVLPAQHWGMARALTTHPRIAQAARAAG 248
Query: 210 KNVVTVAC------FPKETSL 224
V SL
Sbjct: 249 FGSVHECRPAFDEVTASIESL 269
>gi|126653693|ref|ZP_01725612.1| HemD [Bacillus sp. B14905]
gi|126589730|gb|EAZ83865.1| HemD [Bacillus sp. B14905]
Length = 253
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/229 (10%), Positives = 64/229 (27%), Gaps = 18/229 (7%)
Query: 14 RTQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSSESLSTLPANFCRH 70
+ I +G V+ PL + ++ L + + TS ++ RH
Sbjct: 22 AIVDDIAALGGHAVIAPLIETCERMDNDDAKLLNSALQFDWVIFTSQNAVDAFANKMERH 81
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
+ + T+ +N + K + G +
Sbjct: 82 Q----LSAKNFQAKIASIGTKTTTALENLGFQVSFMPSVFSADIFVKEFPSIAGDHPSCL 137
Query: 131 FEDYLIEHK-------IPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSVLYF 181
F L+ Y + + + + N + + + ++F + S+V +
Sbjct: 138 FIRGEKAKSTLKDGLPFNLKEWTVYETVERHDQISAIINCIHHNEDVTVIFASPSAVDVY 197
Query: 182 FSLPLPA--KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + +A+ V + ++++ L
Sbjct: 198 AKSVAVHVGWQATRVAAIGHITEAALEQYGATVDIMPSVYTMQAVIEEL 246
>gi|254418265|ref|ZP_05031989.1| uroporphyrinogen-III synthase [Brevundimonas sp. BAL3]
gi|196184442|gb|EDX79418.1| uroporphyrinogen-III synthase [Brevundimonas sp. BAL3]
Length = 246
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 86/234 (36%), Gaps = 15/234 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ ITR A RT +++ MG+ P++ PL V + A+A TS ++
Sbjct: 12 RVWITRAQPGASRTAARLRGMGFTPLIQPLLAVETLSPPV--PDLDRFAALAFTSRNGVA 69
Query: 62 TLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
A R P+FA+G+A+A AR+ GF + + LA+ I + +
Sbjct: 70 AFAALTSRRDRPVFAVGDATAQAAREAGFVAVRSASGDLTALARRIAAE-LSDAALLAPQ 128
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ L ++ Y + + DA+L ++ +
Sbjct: 129 AETPAGDLAAALAAADARAVSLHPLNVYRTAPT-----AAAAPPEAFDAVLIHSPRAAQA 183
Query: 181 FFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+L + +A C+S A+ + A VA P E +LL L
Sbjct: 184 LAALVPVSLPAARLAGVVIACISPAAAAPLSAVGLTP-AVADAPDEATLLATLK 236
>gi|55981476|ref|YP_144773.1| uroporphyrinogen III synthase [Thermus thermophilus HB8]
gi|55772889|dbj|BAD71330.1| probable uroporphyrinogen III synthase [Thermus thermophilus HB8]
Length = 226
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 19/234 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESL 60
+++TR +AL + +G + L + L+ +++ + +A+TS E
Sbjct: 2 VLLTRGKDRALLARLA--ALGIEAAEVALLEQVDLPARALLSEKLKEGWDYVAVTSKEGA 59
Query: 61 S----TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ A+GE +A + R G F + F
Sbjct: 60 RRLLLAWEEAGRPFLKVAAVGEGTAGVLRAGGLPPAFLPPRATAKDLA------QSFPQA 113
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ ++++ G E+ L + + + Y +++ A + LL+ A+ + F++ S
Sbjct: 114 QRVLFVAGDLAGRDLEEGLRARGVEVVRLPVYATRERALAPEEV-ALLERAEVVAFFSPS 172
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
V F + + VV A P L L
Sbjct: 173 GVRAF---ARWTAKRPKAAAIGPSTGEEARRLGFPVV-EAESPGLEGLFAALLR 222
>gi|304392694|ref|ZP_07374634.1| uroporphyrinogen-III synthase [Ahrensia sp. R2A130]
gi|303295324|gb|EFL89684.1| uroporphyrinogen-III synthase [Ahrensia sp. R2A130]
Length = 233
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 11/231 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP+ + T++K++ MG+ + P+ H L ++ G + +++ +
Sbjct: 4 VLLTRPLAQQAGTRQKLEAMGHDVIAEPMLVLEHLDTP--LPQKEIAGILLTSANAVPAV 61
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
A I A G+A+A AR+ F + H N+ +LA + E + F P PL+
Sbjct: 62 ANAITNTACRILATGQATADAARKAKFNDVHHVNGNAADLANAVNEGAITF-PDGPLLAP 120
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILFYAR---SS 177
+ + + Y + L + D +L + S+
Sbjct: 121 RAQNVARDLAELVERE---TIPWTVYRMTPSVEFSPYTRTALLDGRVDHVLLTSPLISST 177
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
FS A L +S+ I +A+P V V+ E SLL LL
Sbjct: 178 FARLFSQMPQGTTVPAMLAMSSEIRAALPDELTAVTRVSQQCNEASLLSLL 228
>gi|222111551|ref|YP_002553815.1| uroporphyrinogen-iii synthase [Acidovorax ebreus TPSY]
gi|221730995|gb|ACM33815.1| uroporphyrinogen-III synthase [Acidovorax ebreus TPSY]
Length = 272
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/261 (12%), Positives = 62/261 (23%), Gaps = 40/261 (15%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ-------SYGAIAITS 56
++TRP ++A + +Q G + +PL Q Y A+ S
Sbjct: 9 IVTRPAREATQWAADLQARGIAALALPLIAIGPVTNPALREELQQARACVDRYCAVMFVS 68
Query: 57 SESLSTLPANFCR-----------HTPIFAIGEASACLARQKGFTQIFH----GKDNSIN 101
+ + T ++A G + Q G +
Sbjct: 69 GNAAQYFFESNMPLALSGQALAATKTRVWAPGPGTVAALVQAGVATERIDAPGADAAQFD 128
Query: 102 LAKIIVEQKVLFTPQKPLIYLG--------GKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
+ P ++ + G + + + Y
Sbjct: 129 SEALWQVVAPQIGPGDRVLIVRGANAPTAEGGNGREWLARQIAAAGGAVDFVAAYERGAP 188
Query: 154 AYPETTM---KNLLQNADAILFYARSSVLYFFS-LPLPAKISAAFLCLSNNIASAIPASY 209
+ + + L + ++ + LP A L IA A A+
Sbjct: 189 CLDAQQLVLAQAAASDGSVWLLSSSEAIANLRAVLPAQHWGMARALTTHPRIAQAARAAG 248
Query: 210 KNVVTVAC------FPKETSL 224
V SL
Sbjct: 249 FGSVHECRPAFDEVAASIESL 269
>gi|284998460|ref|YP_003420228.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus L.D.8.5]
gi|284446356|gb|ADB87858.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus L.D.8.5]
Length = 234
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 79/235 (33%), Gaps = 16/235 (6%)
Query: 1 MYIVITRPIKKALRTQEK---IQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M I+ RP + EK +QK G + +P+ S Y A+A TS
Sbjct: 1 MRILFLRPDNEDKELNEKLMLLQKNGIEVLNIPIFKIKCIPYS---LPNYDYEALAFTSR 57
Query: 58 ESLSTLPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
S+ + ++ I+AIGE ++ L + T + + + +++L
Sbjct: 58 NSVICFKEHFLIKNRKIYAIGEETSELLMRMYNTNPITPEKFTSVE----LARRILEDKV 113
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYA 174
++ + K + ++ L+ KI I Y S+ I + +L + I F +
Sbjct: 114 NSVLSIRSKKASEDMKN-LLNGKIKYDEIYVYDSEIIGDNINKVSKILAKCEVDAIAFTS 172
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV-VTVACFPKETSLLKLL 228
K + + V + + +++ +
Sbjct: 173 SLMARLIGPYISR-KCKIIVYSIGPITTETLKRVNNEVKIIESKTHSIKGIIETI 226
>gi|120610678|ref|YP_970356.1| uroporphyrinogen III synthase [Acidovorax citrulli AAC00-1]
gi|120589142|gb|ABM32582.1| uroporphyrinogen III synthase [Acidovorax citrulli AAC00-1]
Length = 279
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/264 (12%), Positives = 63/264 (23%), Gaps = 39/264 (14%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ-------SYGAIAITS 56
++TRP + A + + G V +PL A Q + A+ S
Sbjct: 14 IVTRPERDATQWVVHLHARGIDAVALPLIAIRGCARPEARAALQAAREAWPRWRAVMFVS 73
Query: 57 SESLSTLPANFCRH-----------TPIFAIGEASACLARQKGFT----QIFHGKDNSIN 101
S + I+A G +A RQ G +
Sbjct: 74 SNAAHYFFDPPGTGAALFAGDPAALPRIWAPGPGTAQALRQAGVPAEAIDRPAPDATQFD 133
Query: 102 LAKIIVEQKVLFTPQKPLIYLG------------GKPRNFHFEDYLIEHKIPLRVIDCYY 149
+ + ++ + + + Y
Sbjct: 134 SEALWAQVAPQVRHGGRILIVRGAQADGDGSDTVAGTGRDWLAQQIAAAGGQAEFVAAYE 193
Query: 150 SQDIAYPETTM---KNLLQNADAILFYARSSVLYF-FSLPLPAKISAAFLCLSNNIASAI 205
+ + + LF + +V + +LP A L IA A
Sbjct: 194 RGAPDLGAEQLALARAAATDGSLWLFSSSEAVAHLGAALPGQDWSGARALATHPRIAQAA 253
Query: 206 PASYKNVVTVACFPKETSLLKLLP 229
+ V P ++ +
Sbjct: 254 QDAGFGAVRQC-RPALNDVVASIE 276
>gi|298483299|ref|ZP_07001478.1| uroporphyrinogen-III synthase [Bacteroides sp. D22]
gi|298270616|gb|EFI12198.1| uroporphyrinogen-III synthase [Bacteroides sp. D22]
Length = 248
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 66/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKISILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + + ++
Sbjct: 65 RHAIDHFFTLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLIPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + N ++ L ++ I Y + + + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHNDDVKNLLDKNNIQHTEAVMYRTVSNDFTPDE----EFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGVTSLKKNFPDFNQREIKIGTFGSTTAQAVRDAGLRLDLEAPTVQAPSMTAAL 239
>gi|309791326|ref|ZP_07685849.1| uroporphyrinogen III synthase HEM4 [Oscillochloris trichoides DG6]
gi|308226636|gb|EFO80341.1| uroporphyrinogen III synthase HEM4 [Oscillochloris trichoides DG6]
Length = 276
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 75/250 (30%), Gaps = 22/250 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I+IT P ALR + + + G +P++MP + L Q I TS
Sbjct: 21 RILITAPRNYALRFAQAVLRQGGLPILMPTIETDLLPDYTELDAALRQHQQLDWIGFTSR 80
Query: 58 ESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ ++ H + AIG + L + + + + + +
Sbjct: 81 NGIESVLHRCDALGLALKDLHHCHLAAIGRDAERLREVGLRVSLLPCEPSPHGIVAELAQ 140
Query: 109 QKVL-----FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ P + L +F L E + + Y ++ + ++
Sbjct: 141 RPASRGQRILVPAPAVEGLEEPDVIPNFVAGLEEINMIPVRVPAYRTRVLEAQRYQLELD 200
Query: 164 LQNA---DAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF-P 219
L DAI F + V F S+ P A C A+ VA
Sbjct: 201 LIRRGVVDAIAFSSAGEVAGFLSMIEPPTDGPAICCFGPYTAANARRMGLEPSVVASDFS 260
Query: 220 KETSLLKLLP 229
+ +
Sbjct: 261 SFDGFVAAIA 270
>gi|256819447|ref|YP_003140726.1| Uroporphyrinogen III synthase HEM4 [Capnocytophaga ochracea DSM
7271]
gi|256581030|gb|ACU92165.1| Uroporphyrinogen III synthase HEM4 [Capnocytophaga ochracea DSM
7271]
Length = 249
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 66/244 (27%), Gaps = 22/244 (9%)
Query: 1 MY---IVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAI 52
M I++++P KA + I+ +P ++ A+
Sbjct: 1 MKVKSILVSQPEPKAESSPYAQIIENHKVKVDFVPFIKVEGMTAKDVRMQKIDLTNFTAV 60
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS +S+ F EA A ++ + A +
Sbjct: 61 ILTSRKSVDHYFRIAEEMRFKVPTTMKYFCQSEAIAYYLQKYITYRKRKIYVGKKEFADL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + ++ ++ G L + KI + Y +
Sbjct: 121 L--PILKKYKEEKFLFPGSDAPKPEATAALNDIKIKWERVVFYRTVYCDISA----IKEN 174
Query: 166 NADAILFYARSSVLYFFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D + F++ + + F + + A + + A P+ S+
Sbjct: 175 KYDILTFFSPAGIEALFKSFPDFSQKKTKIAVYGDATLKAAEEAGLIIDIKAPSPESPSM 234
Query: 225 LKLL 228
L
Sbjct: 235 TVAL 238
>gi|329848283|ref|ZP_08263311.1| uroporphyrinogen-III synthase HemD family protein [Asticcacaulis
biprosthecum C19]
gi|328843346|gb|EGF92915.1| uroporphyrinogen-III synthase HemD family protein [Asticcacaulis
biprosthecum C19]
Length = 240
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 85/240 (35%), Gaps = 24/240 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+ ITR A T + IQ +G ++ P+ + + + S+ A+ +TS L+
Sbjct: 6 VWITRTPDGARSTAKAIQALGGDAILAPVLKVVPLKP---IIDPHSFDAVILTSRNGLAA 62
Query: 63 LPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
A R + +GEA+A AR + + + L K+I+E L+Y
Sbjct: 63 FGAIVARRSITAWCVGEATAEAARAARYQTVISADGDVDALTKLIIETADQ---HTRLLY 119
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
+ L + +R Y ++ + + +L ++ +
Sbjct: 120 AAPREPAGDLAGDLAKAGFLVREAAVYETRPV--MPVLHPADMARLTYVLVHSAKAGRAV 177
Query: 182 FSLPLPA-----KISAAFLCLSNNI---ASAIPASYKNVV-------TVACFPKETSLLK 226
++ F+C+S++ + + ++ FP E S+LK
Sbjct: 178 AAMLKAHRDRFVLDQLTFVCISDSAWHGLEQALNEGEKNIDAARLIRRISPFPDEASMLK 237
>gi|167763947|ref|ZP_02436074.1| hypothetical protein BACSTE_02330 [Bacteroides stercoris ATCC
43183]
gi|167698063|gb|EDS14642.1| hypothetical protein BACSTE_02330 [Bacteroides stercoris ATCC
43183]
Length = 250
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/240 (10%), Positives = 66/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKVSILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + ++
Sbjct: 65 RHAIDHFFHLCTELRVTIPETMKYFCVTEAIALYIQKYVQYRKRKIFFGNTGKFDDLLSS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + + ++ L + KI + Y + + + D
Sbjct: 125 IIK-HKTEKYLVPMSDVHTDDIKNLLDKSKIQHTEVVMYRTVSNDFTPDE----KFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGVSSLKKNFPDFEQKEIKIGTFGSTTAQAVRDAGLRLDLEAPSVQAPSMTAAL 239
>gi|50083561|ref|YP_045071.1| uroporphyrinogen-III synthase [Acinetobacter sp. ADP1]
gi|49529537|emb|CAG67249.1| uroporphyrinogen-III synthase (UROS) (Uroporphyrinogen-III
cosynthetase) (Hydroxymethylbilane hydrolyase
[cyclizing]) [Acinetobacter sp. ADP1]
Length = 256
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 71/227 (31%), Gaps = 24/227 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITS 56
M ++ TRP +A + + GY +PL S L I + S
Sbjct: 1 MLLINTRPADRADELTQAVSAQGYRVENLPLLVLKKKPFSAHLKQLYQQLDQSQLIVVVS 60
Query: 57 SESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ + H A+G+++A + G + + S + ++
Sbjct: 61 PTAVEIGMQYLQKANISLSSLSHIRWVAVGKSTAKALQYYGISAEIPQVETSEGMLQL-- 118
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN- 166
+ + + + G+ LI+ + L Y Q + ++ +
Sbjct: 119 PVFQMLKSFRQVAFWRGEGGRQLMMQQLIDQGVHLLNFILYDRQCPESATQKILSIAHDI 178
Query: 167 -----ADAILFYARSSVLYFFSLPLPAK---ISAAFLCLSNNIASAI 205
+L + +S L + SL P +L L + +
Sbjct: 179 VQDKQPVWVLITSEASWLNWLSLIQPHAGLFQDCHYLVLGERLEQIL 225
>gi|319900640|ref|YP_004160368.1| Uroporphyrinogen III synthase HEM4 [Bacteroides helcogenes P
36-108]
gi|319415671|gb|ADV42782.1| Uroporphyrinogen III synthase HEM4 [Bacteroides helcogenes P
36-108]
Length = 250
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/239 (10%), Positives = 62/239 (25%), Gaps = 16/239 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F Y A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSSKEFRQQKVSILDYTAVVFTS 64
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ T + + L QK +
Sbjct: 65 RHAIDHFFHLCTELRVTIPETMKYFCVSEAIALYIQKYVQYRKRKIFFGSTGKFDDLLPS 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++ + + + L + K+ + Y + + + D +
Sbjct: 125 IVKHKTEKYLVPMSDVHTDEIKSLLDKSKVQHTEVVMYRTV----SNDFGTDEKFDYDML 180
Query: 171 LFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+F++ + V + + A A+ + + A + S+ L
Sbjct: 181 IFFSPAGVSSLKKNFPDFEQKEIKIGTFGSTTAQAVRDAGLRLDLEAPSVQAPSMTAAL 239
>gi|86141681|ref|ZP_01060205.1| possible uroporphyrinogen-III synthase [Leeuwenhoekiella blandensis
MED217]
gi|85831244|gb|EAQ49700.1| possible uroporphyrinogen-III synthase [Leeuwenhoekiella blandensis
MED217]
Length = 250
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/246 (12%), Positives = 64/246 (26%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAI 52
M I++++P + E +K +P + Y AI
Sbjct: 3 MKVKTILVSQPEPKVENSPYFELQEKKKVKVDFIPFIHVEGVSGKEVRHQKIDLSKYTAI 62
Query: 53 AITSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ F EA A ++ + ++
Sbjct: 63 ILTSRNAVDNFFRIAEEMRFKVPDSLKYFCQSEAVAYYLQKYVVYRKRKIYVGKRTFTEL 122
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + + L + K+ Y +
Sbjct: 123 --SPILKKYKNEKFLLPSSDSLKPEVPNVLNDLKLNWDRGIFYRTVVSDLS----HLKDV 176
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + F K + N+ A+ + V A P+ S+
Sbjct: 177 TYDILVFFSPSGIKSLFENFPDFKQNDTRIAVFGNSTIRAVEEAGLKVNIKAPTPETPSM 236
Query: 225 LKLLPL 230
L
Sbjct: 237 TMALEK 242
>gi|293610071|ref|ZP_06692372.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827303|gb|EFF85667.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 255
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 73/229 (31%), Gaps = 23/229 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ----SYGAIAITS 56
M + TRP +A E +Q GY +PL + S L AI + S
Sbjct: 1 MLFINTRPDTRAAELTEALQNEGYQVESLPLLELVATPFSEHLLQLYQQLVKAQAIVVVS 60
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ + +H A+G+A+A + G + S + + +
Sbjct: 61 PTAVESGMEYLVKSGLKISDLKHIQWIAVGQATANCLNEYGIEAHIPDVETSEGMLNLPI 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
+ + + G+ + L + I + Y+ Q +T K
Sbjct: 121 LHNMQ--QTGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYHRQCPEASYSTFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKISA--AFLCLSNNIASAIPAS 208
N N +L + +S Y+ L + +L L + +
Sbjct: 179 NYNLNKWLVLITSEASWKYWLELCSKNNVQPDGVYLVLGPRLFQIVKEY 227
>gi|241668108|ref|ZP_04755686.1| uroporphyrinogen-III synthase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876643|ref|ZP_05249353.1| uroporphyrinogen III synthase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842664|gb|EET21078.1| uroporphyrinogen III synthase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 252
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 18/223 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A + + ++ GY +P + R + Y + TS ++
Sbjct: 1 MKILVCRPKDDADKLSQLLRSKGYTATSLPCINIDYIR---IASSVLGYTSYIFTSKYAV 57
Query: 61 STLP----ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L ++++G+++A ++ G + S L K+I+E+ V
Sbjct: 58 ESLFAQYNPELFHDKKLYSVGQSTAKTLKKYGLDATYPHDHGSQELLKLILEEDVFDDSF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD--IAYPETTMKNLLQNADAILFYA 174
+ + G L + + Y +A + +
Sbjct: 118 AVISGVSGNELLVKEISQLTK----CDKFETYQRVFESVAALSQAYLKFIDDGINPDVIV 173
Query: 175 RSSVLYFFSLPLPAKI----SAAFLCL-SNNIASAIPASYKNV 212
+S+ F SL AA + + S + +
Sbjct: 174 TTSIDIFKSLNRIFGEIVAPRAAIVTITSPKMLKFVNEQGFEN 216
>gi|332520089|ref|ZP_08396553.1| Uroporphyrinogen III synthase HEM4 [Lacinutrix algicola 5H-3-7-4]
gi|332044648|gb|EGI80842.1| Uroporphyrinogen III synthase HEM4 [Lacinutrix algicola 5H-3-7-4]
Length = 248
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 61/249 (24%), Gaps = 28/249 (11%)
Query: 1 MY---IVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSY 49
M I++++P K EK P + +
Sbjct: 1 MKVKTILVSQPEPKIENSPYFDLSEK---QKVKIDFRPFIHVEGVPSKEIRQQKIDLSKF 57
Query: 50 GAIAITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINL 102
AI +TS ++ F EA A ++ +
Sbjct: 58 SAIILTSRNAVDHFFRVAEEMRFKVPDAMKYFCQSEAVAYYLQKYVVYRKRKIYVGKRTF 117
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
++ + + + + L + + Y + +
Sbjct: 118 TEL--SPLIKKYKDENFLLPAADKLKPEVPEVLNGLGVKWKEAVFYKTVISDLSD----L 171
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKE 221
D ++F++ S + F K + N A+ A V A P+
Sbjct: 172 ENVTYDILVFFSPSGIESLFHNFPDFKQNDTRIAVFGNTTIKAVEAKGLRVDIAAPTPET 231
Query: 222 TSLLKLLPL 230
S+ L
Sbjct: 232 PSMTMALKK 240
>gi|169236889|ref|YP_001690089.1| uroporphyrinogen-III synthase [Halobacterium salinarum R1]
gi|167727955|emb|CAP14743.1| uroporphyrinogen-III synthase [Halobacterium salinarum R1]
Length = 234
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/235 (14%), Positives = 69/235 (29%), Gaps = 22/235 (9%)
Query: 7 RPIKK--ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP 64
RP A + +G +PV P+ + + + +TS +
Sbjct: 3 RPDDDRIADA-VALLDDLGAVPVPDPMLAV----DPTGAIPRGDGAVVVVTSKTGVELAA 57
Query: 65 ANFCRHT--PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
+ + AIG A+A R+ G+T ++ + +V +
Sbjct: 58 DSGWTPGGGRLAAIGPATADACREAGWTVDVVPEEYTS---AGLVAALDGDIDGARVEVA 114
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYY-SQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
+ D L E + Y ++ ++T + DA LF + +V ++
Sbjct: 115 RSDHGSAVLTDGLAEAGAYVHETVLYALTRPAGAGDSTEIAAAGDLDAALFTSSLTVEHW 174
Query: 182 FSLPLPAKI---------SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ I A + A +V V +L +
Sbjct: 175 LAAARERGIESAAREGLADATVGAIGPPTAETAADHGISVDVVPDDAGFEALARA 229
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 16/60 (26%), Gaps = 1/60 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ +++ V + + A A + V V L+ L
Sbjct: 44 VVVVTSKTGVE-LAADSGWTPGGGRLAAIGPATADACREAGWTVDVVPEEYTSAGLVAAL 102
>gi|302308320|ref|NP_985207.2| AER351Wp [Ashbya gossypii ATCC 10895]
gi|299789398|gb|AAS53031.2| AER351Wp [Ashbya gossypii ATCC 10895]
Length = 262
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 80/231 (34%), Gaps = 22/231 (9%)
Query: 19 IQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTLPANFCR---- 69
+ G+ +P+ H + V + + + +TS ++ L +
Sbjct: 24 FESNGFQTHFVPIITHEHLPDEVRGRLSDANYMKRLNCLVVTSQRTVECLYEDVLPSLPA 83
Query: 70 -------HTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVL--FTPQKP 118
+TP+F +G A+ + GFT + G + N + LA++++ +
Sbjct: 84 EARKSLLNTPVFVVGRATQEFMERCGFTDVRGGSETGNGVLLAELMLNMIQKGDISSSGT 143
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
+ L G+ R + L ++ + I Y + + + + + ++ ++
Sbjct: 144 FLLLVGEIRRDIIKKRLESAELEVEEIITYRTSPLHDISERFERVFTDNSWVVLFSPQGT 203
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L +A + A + + + + P+ +SL +
Sbjct: 204 NELLPLLRQG--AAKIAAIGPTTAQYLLDNATPPILTSPKPEPSSLYNAIK 252
>gi|261380375|ref|ZP_05984948.1| uroporphyrinogen-III synthase [Neisseria subflava NJ9703]
gi|284796900|gb|EFC52247.1| uroporphyrinogen-III synthase [Neisseria subflava NJ9703]
Length = 707
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 65/235 (27%), Gaps = 16/235 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSESL 60
++I RP + + + G+ ++ DR + + + S ++
Sbjct: 4 LLIIRPSNRPQQDIQTCHAAGWQAQVLSPIEIEADRSALNKLPEQFKQADVVFWVSPTAI 63
Query: 61 STLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII-VEQKVLFTPQK 117
T + ++ + ++ + ++ + P
Sbjct: 64 ETAAPHLNFSDGPKAHITVGQTSQHTLAQFSPYPVFSPEDGNDSEAVLRMPIWKNLPPNA 123
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + G D L E + + + Y+ + A K ++ A +
Sbjct: 124 RVLIIRGHGGRDFLADKLTELGFQIDIAEIYFRRPHAIDWQNFKT--EDIAAAYVTSGEL 181
Query: 178 VLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
FF P S + IA A+ V TSL L
Sbjct: 182 AREFFHQIPPQFSRFFESLLYFTHHPRIADALRIVGAKHVE-----TVTSLSAAL 231
>gi|187478789|ref|YP_786813.1| uroporphyrinogen-III synthase [Bordetella avium 197N]
gi|115423375|emb|CAJ49909.1| uroporphyrinogen-III synthase [Bordetella avium 197N]
Length = 266
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/205 (8%), Positives = 46/205 (22%), Gaps = 19/205 (9%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
V+TRP + +++ G+ ++P + + Y + S +
Sbjct: 13 VLTRPEGRNEALAGRLRAAGWEVCVLPALRIVALPAPRA-PRPEDYDLVVFVSGNAARLY 71
Query: 64 PANFCRHTPIFAIGEASAC-------------LARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ +A + + +
Sbjct: 72 LKQVYASAGAWPAATVAATVGPGSAQALFESGYFGANTTVLYPDISAPTHDSEALWQVLS 131
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM-----KNLLQ 165
+ ++ + G + L E + Y + T+
Sbjct: 132 AQGALPRRVLLVRGTQGRNWLAERLREAGAQVTAYAAYQRLPAQWDAATLDALRAWARQG 191
Query: 166 NADAILFYARSSVLYFFSLPLPAKI 190
L + S+ + A +
Sbjct: 192 RVATWLLTSGESIDAVAAQIARADL 216
>gi|20094986|ref|NP_614833.1| uroporphyrinogen-III synthase [Methanopyrus kandleri AV19]
gi|19888243|gb|AAM02763.1| Uroporphyrinogen-III synthase [Methanopyrus kandleri AV19]
Length = 228
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 72/232 (31%), Gaps = 22/232 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQK--MGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
M ++ R T + +K + V P+ DR + + Y A+A TS
Sbjct: 1 MRALVVRAPGLERETVQAFKKVDLDAEVV-CPVELVSLDRPKISAGLLSEYDAVAFTSPR 59
Query: 59 SLSTLPANFCRHTP-----IFAIGEASACLARQKGFTQIFHG-KDNSINLAKIIVEQKVL 112
++ L + I A+G + + G + + LA+ + +
Sbjct: 60 TVEFLSEEEVKELRRSDVDIAAVGPRTREALERAGLRVDVMPTEYTTGKLAEELRQ---- 115
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
++ L + R L + + ++ Y ++ + D + F
Sbjct: 116 ---YGAVLALRSRRRTEDLRRTLESYGVKAEELEMY-----DLKPKRVEVNPRKFDVVCF 167
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + F P +I + + + + VV A ++
Sbjct: 168 LSAFTARCFLENVDPTEIPEPVVSIGPVTTKELRRAGLKVV-EAEEHTVEAV 218
>gi|167627539|ref|YP_001678039.1| uroporphyrinogen-III synthase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597540|gb|ABZ87538.1| uroporphyrinogen-III synthase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 252
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 73/223 (32%), Gaps = 18/223 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A + + ++ GY +P + R + Y + TS ++
Sbjct: 1 MKILVCRPKDDADKLSQLLRSKGYTATSLPCINIDYIR---IASSVLGYTSYIFTSKYAV 57
Query: 61 STLP----ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L ++++G+++A ++ G I+ S L K+I+E+ V
Sbjct: 58 ESLFAQYNPELFHDKKLYSVGQSTAKTLKKYGLDAIYPHDHGSQELLKLILEEDVSDDSF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD--IAYPETTMKNLLQNADAILFYA 174
+ + G L + + Y +A + +
Sbjct: 118 AVISGVSGNELLVKEISQLTK----CDKFETYQRVFESVAALSQAYLKFIDDGINPDVIV 173
Query: 175 RSSVLYFFSLPLPAKI----SAAFLCL-SNNIASAIPASYKNV 212
+S+ F SL AA + + S + +
Sbjct: 174 TTSIDIFKSLNRIFGEIVAPRAAIVTITSPKMLKFVNEQGFEN 216
>gi|89889925|ref|ZP_01201436.1| hypothetical protein BBFL7_01745 [Flavobacteria bacterium BBFL7]
gi|89518198|gb|EAS20854.1| hypothetical protein BBFL7_01745 [Flavobacteria bacterium BBFL7]
Length = 220
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 69/221 (31%), Gaps = 19/221 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I+ T+ + + + E + G V + + Y AI ITS ++
Sbjct: 6 RIISTKKLISSQQ--ELLMSAGLSVVNYDILKIQKLKFEY---PSSFYNAIIITSINAID 60
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
L IF +G+ + +KG+ + A + + + +Y
Sbjct: 61 PLWNRVDGSKKIFVVGDKTEAALLEKGWHVEVKANN-----ASELAKIIIANYDHLKFVY 115
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
G R L+ +I + Y S I + DA++F++ V F
Sbjct: 116 FCGLHRRDELPKALLSTQINCVEVKVYDSVAIEKSFDCI------FDAVMFFSPRGVHAF 169
Query: 182 FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+C+ A+A Y V VA
Sbjct: 170 AKANPENI--HLAICIGETTAAAAR-IYTQNVRVAHKTTVE 207
>gi|218131655|ref|ZP_03460459.1| hypothetical protein BACEGG_03276 [Bacteroides eggerthii DSM 20697]
gi|317474722|ref|ZP_07933996.1| uroporphyrinogen-III synthase HemD [Bacteroides eggerthii
1_2_48FAA]
gi|217985958|gb|EEC52297.1| hypothetical protein BACEGG_03276 [Bacteroides eggerthii DSM 20697]
gi|316909403|gb|EFV31083.1| uroporphyrinogen-III synthase HemD [Bacteroides eggerthii
1_2_48FAA]
Length = 250
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 66/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKVSILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + ++
Sbjct: 65 RHAIDHFFHLCTELRVTIPETMKYFCVTEAIALYIQKYVQYRKRKIFFGNTGKFDDLLPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + ++ L + KI + Y + + + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHTEEIKNLLDKSKIQHTEVVMYRTVSNDFTPDE----KFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGVSSLKKNFPDFEQKEIKIGTFGSTTAQAVRDAGLRLDLEAPSVQAPSMTAAL 239
>gi|222480663|ref|YP_002566900.1| Uroporphyrinogen III synthase HEM4 [Halorubrum lacusprofundi ATCC
49239]
gi|222453565|gb|ACM57830.1| Uroporphyrinogen III synthase HEM4 [Halorubrum lacusprofundi ATCC
49239]
Length = 253
Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 62/239 (25%), Gaps = 17/239 (7%)
Query: 2 YIVITRPI-KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+ + RP ++ + + +G PV P+ + A + +TS +
Sbjct: 10 RVAVFRPADERIEDAKALLASLGADPVADPMLAVEPTDATPEDAP-----YVVLTSKTGV 64
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ A + + A ++ + + +
Sbjct: 65 ELAAEAGWEPGDATLVAIGPATAEAARAAGWTVDLVPDEYTSAGLVAALEDRVDG-EHVE 123
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYY-SQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ L E + Y ++ E+ + DA F + +V
Sbjct: 124 VARSDHGSDVLLAGLREAGATVTETVLYRLTRPSDAGESAAMAAAGDLDAAAFTSSLTVT 183
Query: 180 YFFSLPLPAKISAAFL---------CLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+F + A + + A S +V V +L + +
Sbjct: 184 HFLDAAAERGVREAAIEGLNDAVVGVIGPPTAETAADSGIDVDVVPDDADFEALARAVA 242
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 26/111 (23%), Gaps = 8/111 (7%)
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ R + L + +A ++ +++ V
Sbjct: 14 FRPADERIEDAKALLASLGADPVADPMLAVEPTDATPE-------DAPYVVLTSKTGVEL 66
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
A + + A A A+ V V L+ L R
Sbjct: 67 AAE-AGWEPGDATLVAIGPATAEAARAAGWTVDLVPDEYTSAGLVAALEDR 116
>gi|317402905|gb|EFV83447.1| uroporphyrinogen-III synthase [Achromobacter xylosoxidans C54]
Length = 260
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/257 (10%), Positives = 67/257 (26%), Gaps = 31/257 (12%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-ESVFLAMQQSYGAIAITSSES 59
M ++ TRP + ++++ G+ P ++P + L + + S +
Sbjct: 1 MAVL-TRPAGRNEALADRLRAAGWTPCVLPALAIHALPVAADDLPRPADHDMVVFVSGNA 59
Query: 60 LSTLPANFCRHTPIFAIGEASACL---------------ARQKGFTQIFHGKDNSINLAK 104
R A + S +
Sbjct: 60 ARQYLDQLARIGACTAWPRQVVVATVGPASAAGLREMPCFGANTTVLHPGDEAASHDSEA 119
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ + L ++ + G D L H + + Y + E+ + L
Sbjct: 120 LWEVLRGLPRLPARVLLVRGTQGRDWLGDKLAAHGVVVTRHAAYARSPAQWDESELSRLR 179
Query: 165 QN-----ADAILFYARSSVLYFFSLPLPAKI-----SAAFL----CLSNNIASAIPASYK 210
+ L + + A + +F+ L + + + +
Sbjct: 180 RWAAEGVFPTWLITSGEGADAVRAQLRAAGLAAWWQRCSFVLTHPSLGARVPAPAGGAGQ 239
Query: 211 NVVTVACFPKETSLLKL 227
+ C P + S+ +
Sbjct: 240 QAMVKICMPNDESIFQA 256
>gi|219853302|ref|YP_002467734.1| uroporphyrinogen-III synthase-like protein [Methanosphaerula
palustris E1-9c]
gi|219547561|gb|ACL18011.1| uroporphyrinogen-III synthase-like protein [Methanosphaerula
palustris E1-9c]
Length = 227
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 62/234 (26%), Gaps = 17/234 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPV-MMPLSYFIHDRESVFLAMQ---QSYGAIAITS 56
M I ITR K + G+ + PL ++ + + + TS
Sbjct: 1 MKIAITRLAGKEENDAARCNAFGHTSEAVSPLRAEVYADQIEAFVQAVTEGQFDCLFFTS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + + AIG +A +Q G S + +
Sbjct: 61 ALPAQLIGPHLNTWPRVVAIGPTTAATLQQHGIPAETLSMFYSREFVPYL----GSWISM 116
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
K + N D + R CY P T AILF +
Sbjct: 117 KTIGIPRADVPNQALLDSITGAGGIPREFRCYGLVKTGEPLQTADA-----GAILFTSAM 171
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
S P P + + A A+ A V + L L
Sbjct: 172 SYREARWTPRPDLL---VGAIGEVTADAVRAGGTPVDVIGDG-SLEGFLTALNR 221
>gi|126460066|ref|YP_001056344.1| uroporphyrinogen III synthase HEM4 [Pyrobaculum calidifontis JCM
11548]
gi|126249787|gb|ABO08878.1| Uroporphyrinogen III synthase HEM4 [Pyrobaculum calidifontis JCM
11548]
Length = 269
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 67/254 (26%), Gaps = 26/254 (10%)
Query: 3 IVIT--RPIKKALRTQEKIQKMGYIPVMMPLSYF-IHDRESVF--LAMQQSYGAIAITSS 57
+VIT R KA + + + G PV +P+ V + + +
Sbjct: 4 VVITSGRA-HKADLLAKMLTRAGIEPVYLPVVKIGEAGGADVAKFIDEISHFDVFIFMTG 62
Query: 58 ESLSTLPANFCR---HTPIFAIGEASACLARQKGFTQIFHGKDNSINLA-----KIIVEQ 109
+S+++L R + L R + +++
Sbjct: 63 QSVASLVQEAKRAGLEQRLREALSRMTILCRGSKAAGNVKSLLGLTCAVVEETSEELLKV 122
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-D 168
K + + F + + ++ I Y ++ K +L D
Sbjct: 123 AERTLEGKRVAISFYGYLDDEFLREVQKRAAEVKYIQTYRTELEENAAEIAKLVLAGEAD 182
Query: 169 AILFYARSSVLYFFSLPLPAKIS-----------AAFLCLSNNIASAIPASYKNVVTVAC 217
++F + + FF+ ++ + A V
Sbjct: 183 VVVFTSALACNSFFTQLSALGLAEKVANRFRSGAVKLAAVGPVTAEECKKFGVEPHIVPE 242
Query: 218 FPKETSLLKLLPLR 231
P L + +
Sbjct: 243 KPFLAYLGEAIIRH 256
>gi|115768289|ref|XP_791243.2| PREDICTED: similar to uroporphyrinogen III synthase
[Strongylocentrotus purpuratus]
gi|115936696|ref|XP_001191361.1| PREDICTED: similar to uroporphyrinogen III synthase
[Strongylocentrotus purpuratus]
Length = 313
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 8/168 (4%)
Query: 68 CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPR 127
P F++G ++ + R+ G + N+ NL KII+E + KPL+Y G R
Sbjct: 140 WSKLPAFSVGTSTGGVVRKLGLHPMGEDSGNAENLCKIILE--AVKPGSKPLLYPCGTMR 197
Query: 128 NFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD---AILFYARSSVLY---F 181
L + I + Y + E + LQ I+F++ S V Y
Sbjct: 198 RETIPKTLQKEGILFKEDVAYQTVPNPDLEQELAKYLQEKGAPFCIVFFSPSGVQYSKEV 257
Query: 182 FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F S L + +A+ V VA P T+LL+ +
Sbjct: 258 FDKFKADLHSTKLLAIGGTTRAAMQEHGYVVAGVAEKPNPTALLQAIQ 305
>gi|260494550|ref|ZP_05814680.1| uroporphyrinogen-III synthase [Fusobacterium sp. 3_1_33]
gi|260197712|gb|EEW95229.1| uroporphyrinogen-III synthase [Fusobacterium sp. 3_1_33]
Length = 169
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 48/163 (29%), Gaps = 7/163 (4%)
Query: 70 HTPIFAIGEASACLARQKGFTQIFHGKDN-SINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
+ I A+G + + + F + LA+ +V+ ++ +
Sbjct: 8 NIKIGAVGVKTKEILEKYKIVPDFVPNEYLVDKLAEEVVKYTNENDN---ILIVTSDISP 64
Query: 129 FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA 188
Y +K + Y ++ + + L++ D I F + S+V F+
Sbjct: 65 CDTNKYNSLYKRNYEKVVAYNTKKLKVDRKKVLETLKDVDIITFLSSSTVEAFYESLDGD 124
Query: 189 ---KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + I V A LL +
Sbjct: 125 FFILGDKKIASIGPMTSETIKRLGMKVDYEAEKYTADGLLDAI 167
>gi|161528001|ref|YP_001581827.1| uroporphyrinogen III synthase HEM4 [Nitrosopumilus maritimus SCM1]
gi|160339302|gb|ABX12389.1| Uroporphyrinogen III synthase HEM4 [Nitrosopumilus maritimus SCM1]
Length = 267
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 68/257 (26%), Gaps = 32/257 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSY--GAIAITSS 57
I ITR A ++ P+ +P + E + FL ++Y SS
Sbjct: 7 IAITRSSDDASEFISLAEQTNATPIALPTIELVSKGEKIVDEFLDSVETYNPDYSVFMSS 66
Query: 58 ESLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+++ L + ++G + +G + +
Sbjct: 67 KAVKLLFDTAKESGKLETLQLAIANTIVISVGPKTTIALETQGIKVNHQPEKTFS-SVGV 125
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT--MKNL 163
L K +I ++ L + I + I Y + L
Sbjct: 126 GELFTQLNAVGKKVIVPRSGASTPFLKELLNKIGIDVSEIHLYDVCAFRDTSQWNGFREL 185
Query: 164 LQNADA--ILFYARSSVLYFFSLPLPA---------KISAAFLCLSNNIASAIPASYKNV 212
++F + SSV FF + + + + + +
Sbjct: 186 FSQNKVDGVVFTSASSVRGFFEIMTKDYDENSLLDNLAKLSVVSIGPFTSDELKKFKVKN 245
Query: 213 VTVACFPKETSLLKLLP 229
TVA + +
Sbjct: 246 -TVAEVHTVAGAFEAMK 261
>gi|227830972|ref|YP_002832752.1| uroporphyrinogen III synthase [Sulfolobus islandicus L.S.2.15]
gi|229579850|ref|YP_002838249.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus
Y.G.57.14]
gi|229581490|ref|YP_002839889.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus
Y.N.15.51]
gi|227457420|gb|ACP36107.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus L.S.2.15]
gi|228010565|gb|ACP46327.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus
Y.G.57.14]
gi|228012206|gb|ACP47967.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus
Y.N.15.51]
Length = 234
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 79/235 (33%), Gaps = 16/235 (6%)
Query: 1 MYIVITRPIKKALRTQEK---IQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M I+ RP + EK +QK G + +P+ S Y A+A TS
Sbjct: 1 MRILFLRPDNEDTELNEKLMLLQKNGIEVLNIPIFKIKCIPYS---LPNYDYEALAFTSR 57
Query: 58 ESLSTLPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
S+ + ++ I+AIGE ++ L + T + + + +++L
Sbjct: 58 NSVICFKEHFLIKNRKIYAIGEETSELLMRMYNTNPITPEKFTSVE----LARRILEDKV 113
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYA 174
++ + K + ++ L+ KI I Y S+ I + +L + I F +
Sbjct: 114 NSVLSIRSKKASEDMKN-LLNGKIKYDEIYVYDSEIIGDNINKVSKILAKCEVDAIAFTS 172
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV-VTVACFPKETSLLKLL 228
K + + V + + +++ +
Sbjct: 173 SLMARLIGPYISR-KCKIIVYSIGPITTETLKRVNNEVKIIESKTHSIKGIIETI 226
>gi|325129909|gb|EGC52710.1| uroporphyrinogen-III synthase [Neisseria meningitidis OX99.30304]
gi|325202426|gb|ADY97880.1| uroporphyrinogen-III synthase [Neisseria meningitidis M01-240149]
gi|325203864|gb|ADY99317.1| uroporphyrinogen-III synthase [Neisseria meningitidis M01-240355]
gi|325207822|gb|ADZ03274.1| uroporphyrinogen-III synthase [Neisseria meningitidis NZ-05/33]
Length = 246
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 65/229 (28%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D + L A+ S ++
Sbjct: 2 LIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAAGLELLSEQYARADAVFWVSPTAVE 61
Query: 62 TLPANFC---RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T A+G+ S + + D + + A + +
Sbjct: 62 TAVPYLNLSDGIKIHIAVGQGSRRALERYLGRTVIAPHDGNDSEAVLRLPVWNSLPEGAR 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E + + Y+ + + +N A + V
Sbjct: 122 VLFVRGHGGRDFLMNALQEKGFRTEMAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 179
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 180 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 226
>gi|294649012|ref|ZP_06726460.1| uroporphyrinogen-III synthase [Acinetobacter haemolyticus ATCC
19194]
gi|292825147|gb|EFF83902.1| uroporphyrinogen-III synthase [Acinetobacter haemolyticus ATCC
19194]
Length = 258
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/228 (16%), Positives = 73/228 (32%), Gaps = 22/228 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITS 56
M + TRP +A R + +Q GY +PL I S I + S
Sbjct: 1 MRFINTRPQDRADRLTQAMQDAGYQVEHLPLLELIAVPLSEELQQLYQQLDQVQVIVVVS 60
Query: 57 SESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ + H A+G+A+A Q G ++S + + +
Sbjct: 61 PTAVDIGMKYLVKSGLNLHQLAHIRWIAVGQATAKALAQFGIQSDVPEVESSEGMLDLPL 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI-----AYPETTMKN 162
++ + + + G L + + + Y+ Q +P K
Sbjct: 121 LKQQSDL--QKIAFWRGLGGRQFMMQQLQQQGVKIANFVLYHRQCPQQSVFEFPRLLEKM 178
Query: 163 LLQNADAILFYARSSVLYFFSLPLPA--KISAAFLCLSNNIASAIPAS 208
L A+L + +S + L K +L L + + + +
Sbjct: 179 ELDQPVAVLISSEASWKNWLQLCAQNPCKQKWVYLVLGERLTAILNQA 226
>gi|237716896|ref|ZP_04547377.1| uroporphyrinogen-III synthase [Bacteroides sp. D1]
gi|262405664|ref|ZP_06082214.1| uroporphyrinogen-III synthase [Bacteroides sp. 2_1_22]
gi|293368631|ref|ZP_06615238.1| uroporphyrinogen-III synthase [Bacteroides ovatus SD CMC 3f]
gi|294644396|ref|ZP_06722159.1| putative uroporphyrinogen-III synthase HemD [Bacteroides ovatus SD
CC 2a]
gi|294810389|ref|ZP_06769046.1| putative uroporphyrinogen-III synthase HemD [Bacteroides
xylanisolvens SD CC 1b]
gi|299145184|ref|ZP_07038252.1| uroporphyrinogen-III synthase [Bacteroides sp. 3_1_23]
gi|229442879|gb|EEO48670.1| uroporphyrinogen-III synthase [Bacteroides sp. D1]
gi|262356539|gb|EEZ05629.1| uroporphyrinogen-III synthase [Bacteroides sp. 2_1_22]
gi|292636273|gb|EFF54758.1| uroporphyrinogen-III synthase [Bacteroides ovatus SD CMC 3f]
gi|292640231|gb|EFF58486.1| putative uroporphyrinogen-III synthase HemD [Bacteroides ovatus SD
CC 2a]
gi|294442354|gb|EFG11164.1| putative uroporphyrinogen-III synthase HemD [Bacteroides
xylanisolvens SD CC 1b]
gi|298515675|gb|EFI39556.1| uroporphyrinogen-III synthase [Bacteroides sp. 3_1_23]
Length = 248
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 66/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKISILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + + ++
Sbjct: 65 RHAIDHFFTLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLIPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + N ++ L ++ I Y + + + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHNDDVKNLLDKNSIQHTEAVMYRTVSNDFTPDE----EFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGVTSLKKNFPDFNQKEIKIGTFGSTTAQAVRDAGLRLDLEAPTVQAPSMTAAL 239
>gi|224537283|ref|ZP_03677822.1| hypothetical protein BACCELL_02160 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521104|gb|EEF90209.1| hypothetical protein BACCELL_02160 [Bacteroides cellulosilyticus
DSM 14838]
Length = 250
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 66/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + QK G P F Y A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAQKYGVKIDFRPFIKVESVSAKEFRQQKVSILDYTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + + ++
Sbjct: 65 RHAIDHFFHLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGNTGKFEDLLPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + ++ L ++KI Y + + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHTDEIKNLLDKNKIQNTEAVMYRTV----SNDFTSEEEFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGVTSLKKNFPDFQQKEIKIGTFGSTTAQAVRDAGLRLDLEAPSVQAPSMTAAL 239
>gi|302037426|ref|YP_003797748.1| uroporphyrinogen-III C-methyltransferase and uroporphyrinogen-III
synthase [Candidatus Nitrospira defluvii]
gi|300605490|emb|CBK41823.1| Uroporphyrinogen-III C-methyltransferase and Uroporphyrinogen-III
synthase (modular protein) [Candidatus Nitrospira
defluvii]
Length = 489
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 18/231 (7%), Positives = 52/231 (22%), Gaps = 13/231 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSS 57
++ R +++ +G + +P LA + + +
Sbjct: 259 RLLCARARPGRSAIAAELRALGAEVLEIPEVVAEPLYGEPTMDAALARVHEFHGMIFGCA 318
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ + + I + + + +
Sbjct: 319 AGVDAVIPRI-PVFTVPVIAVGVEAAQALSRHGIEPVARVRGACEEAL--REHARLLKDQ 375
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + + + L + + Y Y L D ++ + S+
Sbjct: 376 GFLLVTSEAGRPNLRAELARIGATIEALAAYR-----YSHRMPLMPLPPIDLVVLPSSSA 430
Query: 178 VLYFFSL-PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S A + + + + V A +L+ L
Sbjct: 431 ARAVLSGDVGQAIRTVPMIAIGPRTEAEARHYGAQQVVQAEHDTSAALVAL 481
>gi|270295158|ref|ZP_06201359.1| uroporphyrinogen-III synthase [Bacteroides sp. D20]
gi|317478177|ref|ZP_07937346.1| uroporphyrinogen-III synthase HemD [Bacteroides sp. 4_1_36]
gi|270274405|gb|EFA20266.1| uroporphyrinogen-III synthase [Bacteroides sp. D20]
gi|316905660|gb|EFV27445.1| uroporphyrinogen-III synthase HemD [Bacteroides sp. 4_1_36]
Length = 250
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 66/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKISVLDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + ++
Sbjct: 65 RHAIDHFFHLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGNTGKIDDLIPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + N ++ L ++KI Y + + + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHNDDVKNLLDKNKIQHTEAVMYRTV----SNDFAADEAFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + + + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGISALKKNFPDFDQKEIKIGTFGSTTAQAVRDAGLRLDLEAPSVQAPSMTAAL 239
>gi|264679668|ref|YP_003279575.1| uroporphyrinogen III synthase [Comamonas testosteroni CNB-2]
gi|262210181|gb|ACY34279.1| uroporphyrinogen III synthase [Comamonas testosteroni CNB-2]
Length = 281
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 64/277 (23%), Gaps = 50/277 (18%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----------LAMQQSYGA 51
+++TRP+ A + + G +PL + Y A
Sbjct: 3 RVLVTRPLHDAKPWVDAFRARGLQAEALPLIGIGPCTDPAAHQALLRARQLALKPGHYRA 62
Query: 52 IAITSSESLSTLPAN-----------FCRHTPIFAIGEASACLARQKGFT----QIFHGK 96
+ S ++ A T + G + + G
Sbjct: 63 VMFVSGNAVQYFFAQGQTPALDAEALLAPDTRAWTPGPGTERALLEAGLASLQIDGPSPD 122
Query: 97 DNSINLAKIIVEQKVLFTPQKPLIYLG--------------------GKPRNFHFEDYLI 136
+ P ++ + L
Sbjct: 123 ATQFESEALWQNVHGQVRPGDRVLIVRGTSPATAPVADNADMSIPSTQGAGRDWLAARLR 182
Query: 137 EHKIPLRVIDCYYSQDIAYPETTM---KNLLQNADAILFYARSSVLYFFSLPLPAKISA- 192
E + ++ Y Q + + + + + LF + +V L +
Sbjct: 183 EAGAEVELLAVYERQLPVWTAQQLDLARQAVSDGSLWLFSSSEAVANLQQLLPQQQWHLG 242
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L IAS ++ V + P ++ +
Sbjct: 243 LALTTHERIASKALSAGFGRVLHS-RPSLDDVVASIE 278
>gi|296840921|ref|ZP_06863793.2| uroporphyrinogen-III synthase [Neisseria polysaccharea ATCC 43768]
gi|296839582|gb|EFH23520.1| uroporphyrinogen-III synthase [Neisseria polysaccharea ATCC 43768]
Length = 253
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 65/229 (28%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D + L A+ S ++
Sbjct: 9 LIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAAGLELLSEQYARADAVFWVSPTAVE 68
Query: 62 TLPANFC---RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T A+G+ S + + D + + A + +
Sbjct: 69 TAVPYLNLSDGIKMHIAVGQGSRRALERCLGRTVIAPDDGNDSEAVLRLPVWNSLPEGAR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E + + Y+ + + +N A + V
Sbjct: 129 VLFVRGHGGRDFLMNALQEKGFRTEMAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 187 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 233
>gi|260551058|ref|ZP_05825262.1| uroporphyrinogen-III synthase [Acinetobacter sp. RUH2624]
gi|260405825|gb|EEW99313.1| uroporphyrinogen-III synthase [Acinetobacter sp. RUH2624]
Length = 255
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 70/221 (31%), Gaps = 23/221 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----YGAIAITS 56
M + TRP +A + +Q G+ +PL + S LA AI + S
Sbjct: 1 MLFINTRPDSRAAELTQALQNKGFQVESLPLLELVAQPFSESLAQLYQQLTGAQAIVVVS 60
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ +H A+G+A+A + G + S + + +
Sbjct: 61 PTAVEVGMQYLTQSGLKLDDLKHIQWIAVGQATANRLHEYGIDAHVPDVETSEGMLNLPI 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
+ + + G+ + L + I + Y+ Q + K
Sbjct: 121 LHNMR--QTGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYHRQCPEVSYSKFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKIS--AAFLCLSNN 200
N +L + +S Y+ L L + +L L
Sbjct: 179 NYNLEKWLVLITSEASWKYWLELCLKNNVQPDCVYLVLGPR 219
>gi|160884933|ref|ZP_02065936.1| hypothetical protein BACOVA_02923 [Bacteroides ovatus ATCC 8483]
gi|156109968|gb|EDO11713.1| hypothetical protein BACOVA_02923 [Bacteroides ovatus ATCC 8483]
Length = 248
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 66/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKISILDHTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + + ++
Sbjct: 65 RHAIDHFFTLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLIPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + N ++ L ++ I Y + + + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHNDDVKNLLDKNSIQHTEAVMYRTVSNDFTPDE----EFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGVTSLKKNFPDFNQKEIKIGTFGSTTAQAVRDAGLRLDLEAPTVQAPSMTAAL 239
>gi|225010148|ref|ZP_03700620.1| Uroporphyrinogen III synthase HEM4 [Flavobacteria bacterium
MS024-3C]
gi|225005627|gb|EEG43577.1| Uroporphyrinogen III synthase HEM4 [Flavobacteria bacterium
MS024-3C]
Length = 248
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/246 (11%), Positives = 65/246 (26%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAI 52
M I++++P + I K P + + AI
Sbjct: 1 MKVKTILVSQPEPKMENSPYARLIDKEKVKVDFRPFIHVEGVDAKSVRQQKIDLSQFTAI 60
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ F EA A ++ + +N +
Sbjct: 61 ILTSRNAVDHYFRLAEEMRFKVPDSMKYFCQSEAVAYYLQKYVVYRKRKIYVGKMNFTDL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ K ++ + + L + ++ + Y + +
Sbjct: 121 VPLFKKY--KEEKYLLPSSDVLKPTVPEALDQLQLDWKRGIFYKTVISDLSD----LSDV 174
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F++ S + K + N+ A + + A P+ S+
Sbjct: 175 LYDVLVFFSPSGIESLLKNFPEFKQNNTRIAVFGNSTIKAATDAGLRIDIKAPTPETPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALQK 240
>gi|260575765|ref|ZP_05843761.1| Uroporphyrinogen III synthase HEM4 [Rhodobacter sp. SW2]
gi|259021918|gb|EEW25218.1| Uroporphyrinogen III synthase HEM4 [Rhodobacter sp. SW2]
Length = 246
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/238 (12%), Positives = 68/238 (28%), Gaps = 19/238 (7%)
Query: 3 IVITRPIKKALRTQEKIQKM---GYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I++TRP + R ++ + L + + A+ TS
Sbjct: 8 ILLTRPAAQGDRFAADLRDRFGGDIRIIDSALLAPRFLAPVLPQVRLK---ALIFTSETG 64
Query: 60 LSTLPANFCRHT-----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ + +G +A AR+ G ++ +
Sbjct: 65 VQGFQRIAAETIFSGVACAWCVGNRTAQAAREAGLQ-----AVSAQGDVVALTAAIKAAG 119
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FY 173
PL++L G+ + L I Y + + L ++ +
Sbjct: 120 EMGPLLHLRGRDVRGDLVESLNSANIETYSAIVYAQEQQPLTPQALACLQAPGPVLVPLF 179
Query: 174 ARSSVLYFFSLPLPAKISA--AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + + + A LS +A A + + +A P ++++ L
Sbjct: 180 SPRTASILRAALADVPLQADLWLAALSPAVAEAAEGMPRAGLAIAKRPDAGAMIETLQ 237
>gi|302346029|ref|YP_003814382.1| uroporphyrinogen-III synthase [Prevotella melaninogenica ATCC
25845]
gi|302149514|gb|ADK95776.1| uroporphyrinogen-III synthase [Prevotella melaninogenica ATCC
25845]
Length = 250
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 65/240 (27%), Gaps = 16/240 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITS 56
I++++P + + + + +G V P F Y A+ TS
Sbjct: 4 KILVSQPKPSSEKSPYYDIAEDLGVELVFRPFFKVEGLSAKEFRQQKINLLDYTAVVFTS 63
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + E A ++ + + ++
Sbjct: 64 RHAVDNYFKLAKEMRVTIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGNTGKIDSLIPT 123
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + + L +K+ + Y + E +KN + D
Sbjct: 124 MTK-HKTEKYLVPQSSVHTEALSELLDANKLKHKECVMYRTVSNGLTEEEVKNF--DYDM 180
Query: 170 ILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + A + A + A + S+ L
Sbjct: 181 LVFFSPTGVKALKENIPNFEQGDIKIAAFGPATAKEVEAQGLRLDLQAPSKEYPSMTGAL 240
>gi|288555889|ref|YP_003427824.1| methyltransferase/uroporphyrinogen-III synthase [Bacillus
pseudofirmus OF4]
gi|288547049|gb|ADC50932.1| methyltransferase/uroporphyrinogen-III synthase [Bacillus
pseudofirmus OF4]
Length = 492
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 63/237 (26%), Gaps = 21/237 (8%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+I++ R +++++G P A +++ I S ES+
Sbjct: 257 HILLGRTSGSQGAVAHELEELGAEVFEFP--RMYSKTAEKPQADFRNFDQIVFLSPESVE 314
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
A+ + +K + + L + ++
Sbjct: 315 IFFNWLRADKVDLRDIRAAFHVRSKKSERALEKYGCFTSEL-------SKVKDGCSKVLL 367
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN---ADAILFYARSSV 178
LG + + L++ I+F + SV
Sbjct: 368 LGNAHSANDKVLLTDTWGPH--EYVITHHDLVVSSTDVTCERLKDEGRIQTIVFPSAQSV 425
Query: 179 L----YFFSL---PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F + + +C + A ++ V V P + +L+K L
Sbjct: 426 QTVSDRFMKMGWSIEEINETVKVICFGSMSEKAALSAGYKVDVVLESPTKEALIKAL 482
>gi|333029509|ref|ZP_08457570.1| Uroporphyrinogen III synthase HEM4 [Bacteroides coprosuis DSM
18011]
gi|332740106|gb|EGJ70588.1| Uroporphyrinogen III synthase HEM4 [Bacteroides coprosuis DSM
18011]
Length = 248
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/243 (13%), Positives = 74/243 (30%), Gaps = 22/243 (9%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + K G P + F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIANKYGVKIDFHPFIKVVSVPVQEFRQQKISILDHTAVIFTS 64
Query: 57 SESLSTLPANF-------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
S+ F EA A ++ + + + ++
Sbjct: 65 RHSIDHFFTLCEELRITVPDTMKYFCNSEAIALYIQKYVQYRKRKIFFGTTGKFEGLLPF 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + I N +++L +H I L Y + + K+ + D
Sbjct: 125 IIKNKK-EKFIIPVSDVHNSEIKNHLDKHSIGLTEAVMYRTVSNEFD----KDEAFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLCLS---NNIASAIPASYKNVVTVACFPKETSLLK 226
++F++ S V + +C+ ++ A A+ + + A K S+
Sbjct: 180 LIFFSPSGVTSLKENFPNFEQKN--VCIGTFGSSTAQAVKDAGLRLDLEAPTVKAPSMTA 237
Query: 227 LLP 229
L
Sbjct: 238 ALE 240
>gi|315657640|ref|ZP_07910522.1| putative uroporphyrinogen-III synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492112|gb|EFU81721.1| putative uroporphyrinogen-III synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 252
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 71/241 (29%), Gaps = 22/241 (9%)
Query: 2 YIVITR-PIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-----ESVFLAMQQSYGAIAIT 55
+++ R P +++ G V P++ + + + Y + ++
Sbjct: 4 KLLVPRVP---GDVLATGLEQAGLPVVCAPVTEKVPTPSEDWFDPMQRLQSGEYDWVVLS 60
Query: 56 SSESLSTLPAN-----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S + + L A+ + A+G A+A RQ G D + A+ +VE
Sbjct: 61 SVATATFLDAHYDLEDLFAQVQVAAVGSATAEAIRQFDGHVDLVGPDPAC--AESLVEVF 118
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
++ G L + + Y S + + L
Sbjct: 119 PA--GTGTVLLPGAVGAAPTLGQGLNRKGYNVEKLRLYESVCLPDLPLEWEAALAPGAHT 176
Query: 169 AILFYARSSVLYFFSLPLPAKISAAF--LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+L A S L A + + + A+ + + V +++
Sbjct: 177 YVLITAGSVAHAAHQLLTKAGVKQWPEPIAFGKSSATVLRELGWSAAEVCETTNTEGVVR 236
Query: 227 L 227
Sbjct: 237 A 237
>gi|111220810|ref|YP_711604.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain-containing protein [Frankia alni ACN14a]
gi|111148342|emb|CAJ60014.1| putative transcriptional regulator [Frankia alni ACN14a]
Length = 395
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/254 (9%), Positives = 57/254 (22%), Gaps = 35/254 (13%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY------GAIAITSSESLSTLPAN 66
+++ G V P + + L + T++
Sbjct: 46 EELASLLERRGARVVQAPALRIVPLADDGKLLAATRACLTERLDVVIATTAIGFRGWLEA 105
Query: 67 FCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + A + +S + A+++
Sbjct: 106 AEGWGLGDGLRDRLAQARLFTRGPKVTGAVRAAGLTECWSPHSESGAELMAHLLGTDLAG 165
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAILF 172
+ + L + I Y + + + A+ F
Sbjct: 166 LRIAVQLHGEPLPDMVEGLRAAGAEVVEIPVYRWEPPEDLRPVGRMVELIVTGGVSAVTF 225
Query: 173 YARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ +VL A C+ A+ + + VV +
Sbjct: 226 TSAPAVLSLLGTAREAGRLDETLAALRADVLAACVGPVCAAPLVRAGIPVV-TPERYRLG 284
Query: 223 SLLKLLP----LRR 232
+L++ L RR
Sbjct: 285 ALVRTLSDELPRRR 298
>gi|225023385|ref|ZP_03712577.1| hypothetical protein EIKCOROL_00243 [Eikenella corrodens ATCC
23834]
gi|224943863|gb|EEG25072.1| hypothetical protein EIKCOROL_00243 [Eikenella corrodens ATCC
23834]
Length = 251
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/238 (15%), Positives = 71/238 (29%), Gaps = 16/238 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM--QQSYGAIAITSSESL 60
++I RP + ++ G+ PV PL + + ++ Q A S ++
Sbjct: 7 LLIIRPANRIPADAALCRRTGWQPVPFPLIHIRPEANALAGLPTQLQQASAAVWISPTAV 66
Query: 61 STL------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
T P A+G +A +Q GF +I + + A + +
Sbjct: 67 ETALSLLSGSLISSLSQPQIAVGSGTAKALQQAGFARIVAPDNGHDSEAVLALPLWQRLN 126
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
P ++ + G+ D L + D Y Q A +
Sbjct: 127 PGASVVIIRGREGRNTLPDTLYRRGFQVACADIYQRQP--LMPDWTLFTAAQPAAAWITS 184
Query: 175 RSSVLYFFSLPL----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPK--ETSLLK 226
V F+ S + IA A+ + + + E +L+
Sbjct: 185 AEQVRLLFAAAPASLTQQLQSLLYFAHHPRIAEALSQAGAARIRLLSSAAELENALIA 242
>gi|299771849|ref|YP_003733875.1| uroporphyrinogen-III synthase [Acinetobacter sp. DR1]
gi|298701937|gb|ADI92502.1| uroporphyrinogen-III synthase [Acinetobacter sp. DR1]
Length = 255
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 73/229 (31%), Gaps = 23/229 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ----SYGAIAITS 56
M + TRP +A + +Q GY +PL + S L AI + S
Sbjct: 1 MLFINTRPDSRAAELTDALQNEGYQVESLPLLELVAKPFSEHLLQLYQQLVKAQAIVVVS 60
Query: 57 SESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ + H A+G+A+A + G + S + + +
Sbjct: 61 PTAVDVGMQYLIQSGLKLDDLTHIQWIAVGQATANRLHEYGVDAHIPDVETSEGMLNLPI 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
+ + + G+ + L + I + Y+ Q +T K
Sbjct: 121 LHNMKQD--GSVAFWRGEGGRQFMMETLQQQGIQILNFVLYHRQCPETSYSTFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKIS--AAFLCLSNNIASAIPAS 208
N + +L + +S Y+ L L + +L L + +
Sbjct: 179 NYNLHKWLVLITSEASWKYWLELCLKNNVQPDCVYLVLGPRLFQIVKEY 227
>gi|227828213|ref|YP_002829993.1| uroporphyrinogen III synthase [Sulfolobus islandicus M.14.25]
gi|229585442|ref|YP_002843944.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus M.16.27]
gi|238620404|ref|YP_002915230.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus M.16.4]
gi|227460009|gb|ACP38695.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus M.14.25]
gi|228020492|gb|ACP55899.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus M.16.27]
gi|238381474|gb|ACR42562.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus M.16.4]
gi|323475280|gb|ADX85886.1| Uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus REY15A]
gi|323478005|gb|ADX83243.1| uroporphyrinogen III synthase HEM4 [Sulfolobus islandicus HVE10/4]
Length = 234
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 79/235 (33%), Gaps = 16/235 (6%)
Query: 1 MYIVITRPIKKALRTQEK---IQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M I+ RP + EK +QK G + +P+ S Y A+A TS
Sbjct: 1 MRILFLRPDNEDTELNEKLMLLQKNGIEVLNIPIFKIKCIPYS---LPNYDYEALAFTSR 57
Query: 58 ESLSTLPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
S+ + ++ I+AIGE ++ L + T + + + +++L
Sbjct: 58 NSVICFKEHFLIKNRKIYAIGEETSELLMRMYNTNPITPEKFTSVE----LARRILEDKV 113
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYA 174
++ + K + ++ L+ KI I Y S+ I + +L + I F +
Sbjct: 114 NSVLSIRSKKASEDMKN-LLNGKIKYDEIYVYDSEIIRDNINKVSKILAKCEVDAIAFTS 172
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV-VTVACFPKETSLLKLL 228
K + + V + + +++ +
Sbjct: 173 SLMARLIGPYISR-KCKIIVYSIGPITTETLKRVNNEVKIIESKTHSIKGIIETI 226
>gi|254804656|ref|YP_003082877.1| Uroporphyrinogen-III synthase [Neisseria meningitidis alpha14]
gi|254668198|emb|CBA04934.1| Uroporphyrinogen-III synthase [Neisseria meningitidis alpha14]
gi|308388964|gb|ADO31284.1| uroporphyrinogen-III synthase HemD [Neisseria meningitidis
alpha710]
gi|325135999|gb|EGC58609.1| uroporphyrinogen-III synthase [Neisseria meningitidis M0579]
Length = 253
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 65/229 (28%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D + L A+ S ++
Sbjct: 9 LIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAAGLELLSEQYARADAVFWVSPTAVE 68
Query: 62 TLPANFC---RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T A+G+ S + + D + + A + +
Sbjct: 69 TAVPYLNLSDGIKIHIAVGQGSRRALERYLGRTVIAPHDGNDSEAVLRLPVWNSLPEGAR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E + + Y+ + + +N A + V
Sbjct: 129 VLFVRGHGGRDFLMNALQEKGFRTEMAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 187 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 233
>gi|190348909|gb|EDK41462.2| hypothetical protein PGUG_05560 [Meyerozyma guilliermondii ATCC
6260]
Length = 262
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 67/230 (29%), Gaps = 20/230 (8%)
Query: 19 IQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAI-----AITSSESLSTLPAN------- 66
G+ P +PL H + + ITS ++ L
Sbjct: 26 FTDAGFEPTFIPLLKHGHVDREKSIEYFTGEEFLSIPVFIITSQRAVECLNECLEHVSSE 85
Query: 67 ----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
T + L + ++ I+ + V +I+L
Sbjct: 86 IKTVIHEKTVYTVGPATTEVLREAGFTNIKGGSDAGNGSVLSDIIIKDVQEGGPSKMIFL 145
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFF 182
G+ R L + KI L Y ++ + + ++ ++F++ +
Sbjct: 146 TGEIRKDIIPRKLKQAKIDLIEKVIYKTEPRDDIVSNFHSSSKDVRWVVFFSPQGTVPIV 205
Query: 183 SLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
A+ S+A + + + + VA P+ SLL +
Sbjct: 206 EHLQGAERSSAMGPFVASIGPTTEEYLQSYSIGIDAVASKPEAKSLLAAI 255
>gi|149369455|ref|ZP_01889307.1| DNA methylase, putative [unidentified eubacterium SCB49]
gi|149356882|gb|EDM45437.1| DNA methylase, putative [unidentified eubacterium SCB49]
Length = 380
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 67/227 (29%), Gaps = 17/227 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I+ T+ +K R E + G+ V ++ + TS +
Sbjct: 159 KILSTKKLKPNQR--ELLLGQGFSLVDYNAIEIEFIDFETPTIIENA----IFTSQNGVH 212
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
I + Q + N + + V ++
Sbjct: 213 AFFDKNSNLEKIKNCFCVGKKA--KSLLEQKGLKVIETANYGVDLAQIIVKKYKKESFHL 270
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
G+ R + L KI + + Y + + Q D ILF++ S V +
Sbjct: 271 FCGEQRRDEIPNTLNASKINISEVKTYKTTLKP------RKFNQKWDGILFFSPSGVESY 324
Query: 182 FSLPLPAKISAA--FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F +++ C+ N A+A + + +A S++
Sbjct: 325 FKENQDQQLNNKSLLFCIGNTTANAARKY-SDHIVIANSTLVESVIA 370
>gi|146413138|ref|XP_001482540.1| hypothetical protein PGUG_05560 [Meyerozyma guilliermondii ATCC
6260]
Length = 262
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 67/230 (29%), Gaps = 20/230 (8%)
Query: 19 IQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAI-----AITSSESLSTLPAN------- 66
G+ P +PL H + + ITS ++ L
Sbjct: 26 FTDAGFEPTFIPLLKHGHVDREKSIEYFTGEEFLLIPVFIITSQRAVECLNECLEHVSLE 85
Query: 67 ----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
T + L + ++ I+ + V +I+L
Sbjct: 86 IKTVIHEKTVYTVGPATTEVLREAGFTNIKGGSDAGNGSVLSDIIIKDVQEGGPSKMIFL 145
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFF 182
G+ R L + KI L Y ++ + + ++ ++F++ +
Sbjct: 146 TGEIRKDIIPRKLKQAKIDLIEKVIYKTEPRDDIVSNFHSSSKDVRWVVFFSPQGTVPIV 205
Query: 183 SLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
A+ S+A + + + + VA P+ SLL +
Sbjct: 206 EHLQGAERSSAMGPFVASIGPTTEEYLQSYSIGIDAVASKPEAKSLLAAI 255
>gi|323464251|gb|ADX76404.1| uroporphyrinogen-III synthase [Staphylococcus pseudintermedius
ED99]
Length = 225
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 64/213 (30%), Gaps = 12/213 (5%)
Query: 24 YIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC--RHTPIFAIGEASA 81
V +P + + Y + TS +++ + IGE +
Sbjct: 18 AEIVHLPFVTTEPLPFDQSVLG-RHYDWLVFTSQNAVTHFQPYLKLLNFNKLAVIGEKTK 76
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
+G F D S + ++ + ++ L
Sbjct: 77 AFCESQGLRVDFFPADYSQEG----FLDAFPTQQGQHILIPSSQRARPLLQEVLQVRGFN 132
Query: 142 LRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSN 199
+ ID Y S + K ++ DA+ F + S+V FF + + +
Sbjct: 133 VEKIDLYTSCFLLENVKEAKARIETGQVDALTFASASAVKAFFHDDTSLNFDS-YYAIGQ 191
Query: 200 NIASAIPASYKNVVTVACFPKETSLL-KLLPLR 231
A I + ++A S++ K+L R
Sbjct: 192 QTARQIQDYGYSC-SIADIQTLESMVTKILEER 223
>gi|326388532|ref|ZP_08210126.1| uroporphyrinogen-III synthase [Novosphingobium nitrogenifigens DSM
19370]
gi|326206997|gb|EGD57820.1| uroporphyrinogen-III synthase [Novosphingobium nitrogenifigens DSM
19370]
Length = 231
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 20/235 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV-FLAMQQSYGAIAITSSESLS 61
+++ RP T + + G PL + S+ + + S+
Sbjct: 6 VLVLRPEPGNASTVAALHEAGIEACAAPLFAYAPRVWSLPDRDEDGEWRGLLAGSAAIFR 65
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
H P+ A+G ++A AR+ GFT G L +
Sbjct: 66 HGGPLLSTLTHVPVHAVGASTAAAARKAGFTVAQTGSGGLQRLVADLAP----------- 114
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+P + + Y ++ + L L ++ +
Sbjct: 115 -GRYLRPCGEAHVALSPPSGVTVLDRIVYAAKPRPLSDRAEVTLRAGPTLALLHSGEAAR 173
Query: 180 YFFSLPLP---AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+F + L A CL+ IA++ + A P E +LL L +
Sbjct: 174 HFRAECLARAIPLSRVALACLAPRIAASAGE-GWETIETAQSPHEEALLS-LARQ 226
>gi|219115113|ref|XP_002178352.1| uroporphyrinogen-iii synthase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217410087|gb|EEC50017.1| uroporphyrinogen-iii synthase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 296
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 68/233 (29%), Gaps = 15/233 (6%)
Query: 3 IVITRPIKKALRTQEKIQKM--G-YIPVMMPLSYFIHDRESVFLA---MQQSYGAIAITS 56
+ +TR + + ++ G + +P + LA + + +A+TS
Sbjct: 50 VAVTREDGNNKKLLKALESRLAGRISVLEVPCIAHADGEDYALLAEKLRSERWDYVAVTS 109
Query: 57 SESL----STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ S + P+ A+G+A++ + G F ++
Sbjct: 110 PQAAIILNSAWDSVRDDPIPVTAVGKATSEALEEYGIAVSFCPSKAIATTL-MLELPATR 168
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
T ++Y E+ L E + ++ Y + + + + F
Sbjct: 169 VTDATRVLYPASAKARTTLENGLRERGFEVVRLNAYDTVSAHWTH-IQRTNAEKCQVACF 227
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYK--NVVTVACFPKETS 223
+ S+V + + C+ A + P
Sbjct: 228 GSPSAVDGWLRN-SNNNTTVLAACIGKTSADVCRDRGWPKECIFFPDKPGIEG 279
>gi|119384729|ref|YP_915785.1| putative uroporphyrinogen-III synthase [Paracoccus denitrificans
PD1222]
gi|119374496|gb|ABL70089.1| putative uroporphyrinogen-III synthase [Paracoccus denitrificans
PD1222]
Length = 224
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 59/229 (25%), Gaps = 22/229 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP + R + +G ++ P+ + + TS ++
Sbjct: 9 LLLTRPEPASRRFAAGLAHLGLEVLISPVLRIRPVAHDA--GRLAAARGLVFTSVNAVPA 66
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
A R A A A T+ + L + E +
Sbjct: 67 AGAGRGRPAICVGPATAEAARAAGFDVTEGPGDAARMMPLLDGLGEGWLH---------- 116
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSVLYF 181
+ ++P+ + Y + L A IL ++ S
Sbjct: 117 --------PHGAHVAKELPVPDMVVYDQLPEPLNAAALAALAGTAPVILPLFSPRSARIL 168
Query: 182 FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
A+ +S A + A P +L +
Sbjct: 169 SVQAADARAPLWLAPISPA-AQDAWQGPAARIAPAPTPDADGVLWAVER 216
>gi|167900345|ref|ZP_02487746.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia pseudomallei 7894]
Length = 630
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 58/240 (24%), Gaps = 36/240 (15%)
Query: 23 GYIPVMMPLSYFIHDRESV----FLAMQQSYGAIAITSSESLSTLPANFCRHTPIF---- 74
G + PL + A +Y + S ++ A P
Sbjct: 1 GIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNAVDHALARLGAIWPHPLPIG 60
Query: 75 ----------AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ-----KPL 119
A +A R + G + + + E F + K +
Sbjct: 61 VVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESLFAEIARAFDGEAKLAGKRV 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----NADAILFYAR 175
+ + G + L E + ++ Y + + A L +
Sbjct: 121 LIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAWERVHALLSGAPHAWLVTSS 180
Query: 176 SSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
V L F+ + I A + +T+ + +++
Sbjct: 181 EGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARALGFDRITLT-GAGDERIVRA 239
>gi|325206381|gb|ADZ01834.1| uroporphyrinogen-III synthase [Neisseria meningitidis M04-240196]
Length = 246
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 64/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D + L A+ S ++
Sbjct: 2 LIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAAGLELLSEQYARADAVFWVSPTAVE 61
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I A + S + + D + + A + +
Sbjct: 62 TAVPYLNLSDGIKAQIAVGQGSRRALERCLVRTVIAPDDGNDSEAVLRLPVWNSLPEGAR 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 122 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 179
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 180 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 226
>gi|315654434|ref|ZP_07907342.1| putative uroporphyrinogen-III synthase [Mobiluncus curtisii ATCC
51333]
gi|315491469|gb|EFU81086.1| putative uroporphyrinogen-III synthase [Mobiluncus curtisii ATCC
51333]
Length = 252
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 71/241 (29%), Gaps = 22/241 (9%)
Query: 2 YIVITR-PIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-----ESVFLAMQQSYGAIAIT 55
+++ R P +++ G V P++ + + + Y + ++
Sbjct: 4 KLLVPRVP---GDVLATGLEQAGLPVVCAPVTEKVPTPSEDWFDPMQRLQSGEYDWVVLS 60
Query: 56 SSESLSTLPAN-----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S + + L A+ + A+G A+A RQ G D + A+ +VE
Sbjct: 61 SVATATFLDAHYDLEDLFAQVQVAAVGSATAEAIRQFDGHVDLVGPDPAC--AESLVEVF 118
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
++ G L + + Y S + + L
Sbjct: 119 PA--GTGTVLLPGAVGAAPTLGQGLNRKGYNVEKLRLYESVCLPDLPLEWETALAPGAHT 176
Query: 169 AILFYARSSVLYFFSLPLPAKISAAF--LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+L A S L A + + + A+ + + V +++
Sbjct: 177 YVLITAGSVAHAAHQLLTKAGVKQWPEPIAFGKSSATVLRELGWSAAEVCETTNAEGVVR 236
Query: 227 L 227
Sbjct: 237 A 237
>gi|224418342|ref|ZP_03656348.1| putative uroporphyrinogen III cosynthase HemD [Helicobacter
canadensis MIT 98-5491]
gi|253827663|ref|ZP_04870548.1| uroporphyrinogen-III synthetase [Helicobacter canadensis MIT
98-5491]
gi|313141873|ref|ZP_07804066.1| uroporphyrinogen III cosynthase [Helicobacter canadensis MIT
98-5491]
gi|253511069|gb|EES89728.1| uroporphyrinogen-III synthetase [Helicobacter canadensis MIT
98-5491]
gi|313130904|gb|EFR48521.1| uroporphyrinogen III cosynthase [Helicobacter canadensis MIT
98-5491]
Length = 231
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 53/195 (27%), Gaps = 2/195 (1%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLA 84
+ L +S+ + + TS ++ L +
Sbjct: 18 EVEYLELLEICFVEDSMLKQKIKEVECLLFTSKNAVFALEHFMPKEWQNLPCYVIGEGSK 77
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+ S + + V K ++++ K + + L + I +
Sbjct: 78 KALESLGGKVEFVASAAYGDLFGRELVEILRGKKVLFVRAKKVASNLVEILKKGGIVVLE 137
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
Y ++ + E K + F A SS+ F + S LC+ + A
Sbjct: 138 SILYETKILNISEDK-KQSFKEDSIFFFSAPSSLRAFLQNY-AWRESYLALCIGKSTAKV 195
Query: 205 IPASYKNVVTVACFP 219
++ P
Sbjct: 196 AEELLGKNAKISLSP 210
>gi|207742665|ref|YP_002259057.1| bifunctional protein: uroporphyrin-III c-methyltransferase and
uroporphyrinogen-III synthase [Ralstonia solanacearum
IPO1609]
gi|206594059|emb|CAQ60986.1| bifunctional protein: uroporphyrin-III c-methyltransferase and
uroporphyrinogen-III synthase [Ralstonia solanacearum
IPO1609]
Length = 661
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 61/236 (25%), Gaps = 29/236 (12%)
Query: 15 TQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSESLSTLPA----- 65
+++ G + PL LA Y + S ++ A
Sbjct: 2 LVAALERHGLRTLQFPLLDIAPTPNLDDLRAALADPSRYALVVFVSPNAVQQAFAAMPEG 61
Query: 66 -NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK--------IIVEQKVLFTPQ 116
+ + P+ +G ASA G H A +
Sbjct: 62 FRWPQDVPVAVVGPASAQALAAHGVEPPTHSVIRPDVHADDARQDSEALYARLDPAQLSG 121
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS---QDIAYPETTMKNLLQNADAILFY 173
+ ++ + G D L E + +R ++ Y A ++ +L A
Sbjct: 122 REVLIVRGNGGREWLADRLREAGVAVRTVEAYRRSVPVPDAAAWAALREVLAGRHAWTLT 181
Query: 174 ARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ +V SL +A I + VT+ +
Sbjct: 182 SSEAVRNLDSLARASLTAAEVDTLHAAPCFAPHARIVEQAQSLGFRDVTLTGAGDD 237
>gi|333030902|ref|ZP_08458963.1| Uroporphyrinogen III synthase HEM4 [Bacteroides coprosuis DSM
18011]
gi|332741499|gb|EGJ71981.1| Uroporphyrinogen III synthase HEM4 [Bacteroides coprosuis DSM
18011]
Length = 291
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 67/253 (26%), Gaps = 25/253 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
++IT P + R ++ G P+ +P+ I +S + IA +S
Sbjct: 33 RVLITAPEGYSQRFEKSFTGTGIQPIAIPVIETISQGQSDEIRGAFYNIDDIDYIAFSSR 92
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN-----------LAKII 106
+++ L +H I +A K + + +A +
Sbjct: 93 KAIQALEEALQKHPEIKNDLRKVELIAIGKDIDYLREVVGGGQHIIVPSEPSPAGIANEL 152
Query: 107 VEQKVLFTPQKPLIYLG-----GKPRNFHFEDYLIEHKIPLRVIDCYYSQDI---AYPET 158
+Q+ + + F D L + + + + Y ++ +
Sbjct: 153 AKQENIQGKTIAVWVPRVEEIKEPYVVPDFMDRLEKIGLKVIRNEVYITRPARQSNLNDV 212
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAK-ISAAFLCLSNNIASAIPASYKNVVTVAC 217
I F + + + C + +V A
Sbjct: 213 VQNIQAGKVQCIAFTSSAEIDVLLKAYQKPLPEELVIACFGPYTTAFAQEKGLHVAITAT 272
Query: 218 F-PKETSLLKLLP 229
++ +
Sbjct: 273 NFSSFLGFVEAIE 285
>gi|325142017|gb|EGC64449.1| uroporphyrinogen-III synthase [Neisseria meningitidis 961-5945]
gi|325197997|gb|ADY93453.1| uroporphyrinogen-III synthase [Neisseria meningitidis G2136]
Length = 246
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 63/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D + L A+ S ++
Sbjct: 2 LIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAAGLELLSEQYARADAVFWVSPTAVE 61
Query: 62 TLPANFCRHTPIFAIGEA---SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I S + + +D + + A + +
Sbjct: 62 TAVPYLNLSDGIKMHISVGQGSRRALERCLGRTVIAPEDGNDSEAVLRLTVWNSLPEGAR 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 122 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 179
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 180 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 226
>gi|288800268|ref|ZP_06405726.1| uroporphyrinogen-III synthase [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332481|gb|EFC70961.1| uroporphyrinogen-III synthase [Prevotella sp. oral taxon 299 str.
F0039]
Length = 250
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 65/242 (26%), Gaps = 20/242 (8%)
Query: 2 YIVITRPIKKALRT----QEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I+I++P + ++ EK G V P F Y A+
Sbjct: 4 KILISQPQPTSEKSPYYEIEK--AYGVQCVFRPFFKVEGLNAKEFRNQKINILDYTAVVF 61
Query: 55 TSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ F + E A ++ + + ++
Sbjct: 62 TSRHAIDNFFKLAKEMRITIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGTTGKIADLI 121
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + + N L K+ + Y + D + + K +
Sbjct: 122 PLMAKHKE-EKYLVPMSEGHNEDVTKLLDAKKLKHQECIMYRTVDNDFNDEEKKAF--DY 178
Query: 168 DAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D ++F++ V + K A A + A PK S+
Sbjct: 179 DMVVFFSPMGVKALYKNFPNFKQDKIKIGTFGQGTAKAAQDEGLELTLQAPTPKYPSMTS 238
Query: 227 LL 228
+
Sbjct: 239 AM 240
>gi|315224889|ref|ZP_07866709.1| uroporphyrinogen-III synthase [Capnocytophaga ochracea F0287]
gi|314945164|gb|EFS97193.1| uroporphyrinogen-III synthase [Capnocytophaga ochracea F0287]
Length = 249
Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 66/244 (27%), Gaps = 22/244 (9%)
Query: 1 MY---IVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAI 52
M I++++P KA + I+ +P ++ A+
Sbjct: 1 MKVKSILVSQPEPKAESSPYAQIIENHKVKVDFVPFIKVEGMTAKDVRMQKIDLTNFTAV 60
Query: 53 AITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS +S+ F EA A ++ + A +
Sbjct: 61 ILTSRKSVDHYFRIAEEMRFKVPTTMKYFCQSEAIAYYLQKYITYRKRKIYVGKKEFADL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + ++ ++ G L + KI + Y +
Sbjct: 121 L--PILKKYKEEKFLFPGSDAPKPEATAALNDIKIKWERVVFYRTVYCDISA----IKEN 174
Query: 166 NADAILFYARSSVLYFFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D + F++ + + F + + A + + A P+ S+
Sbjct: 175 KYDILTFFSTAGIEALFKSFPDFSQKKTKIAVYGDATLKAAEEAGLIIDIKAPSPESPSM 234
Query: 225 LKLL 228
L
Sbjct: 235 TVAL 238
>gi|163753355|ref|ZP_02160479.1| uroporphyrinogen-III synthase [Kordia algicida OT-1]
gi|161327087|gb|EDP98412.1| uroporphyrinogen-III synthase [Kordia algicida OT-1]
Length = 248
Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 57/244 (23%), Gaps = 18/244 (7%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAI 52
M I++++P + I K P + + AI
Sbjct: 1 MKVKTILVSQPEPKIENSPYSRLIDKQKVKIDFRPFIHVEGVSARDVRHQKVDLSKFTAI 60
Query: 53 AITSSESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+TS ++ P + + + K + E
Sbjct: 61 ILTSRNAVDHFFRVAEEMRFKVPDTMKYFCQSEAVAYYLQKYVVYRKRKIYVGKRTFQEL 120
Query: 110 KVLFTPQKP--LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
L K + D L I Y + +
Sbjct: 121 SPLIKKYKDEVFLLPSSDALKPAVPDTLNSLNITWERGVFYKTVVSDLSD----LRDVYY 176
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D ++F++ S + + + + N A + V A P+ S+
Sbjct: 177 DILVFFSPSGIKSLLANFPDFEQNDTRIAVFGNTTVKATTEAGLRVDIKAPTPETPSMTM 236
Query: 227 LLPL 230
L
Sbjct: 237 ALAK 240
>gi|319892714|ref|YP_004149589.1| Uroporphyrinogen-III synthase [Staphylococcus pseudintermedius
HKU10-03]
gi|317162410|gb|ADV05953.1| Uroporphyrinogen-III synthase [Staphylococcus pseudintermedius
HKU10-03]
Length = 225
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 64/213 (30%), Gaps = 12/213 (5%)
Query: 24 YIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC--RHTPIFAIGEASA 81
V +P + + Y + TS +++ + IGE +
Sbjct: 18 AEIVHLPFVTTEPLPFDQSVLG-RHYDWLVFTSQNAVTHFQPYLKLLNFNRLAVIGEKTK 76
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
+G F D S + ++ + ++ L
Sbjct: 77 AFCESQGLRVDFFPADYSQEG----FLDAFPTQQGQHILIPSSQRARPLLQEVLQVRGFN 132
Query: 142 LRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSN 199
+ ID Y S + K ++ DA+ F + S+V FF + + +
Sbjct: 133 VEKIDLYTSCFLLENVKEAKARIETGQVDALTFASASAVKAFFHDDTSLNFDS-YYAIGQ 191
Query: 200 NIASAIPASYKNVVTVACFPKETSLL-KLLPLR 231
A I + ++A S++ K+L R
Sbjct: 192 QTARQIQDYGYSC-SIADIQTLESMVTKILEER 223
>gi|226951769|ref|ZP_03822233.1| uroporphyrinogen-III synthase [Acinetobacter sp. ATCC 27244]
gi|226837484|gb|EEH69867.1| uroporphyrinogen-III synthase [Acinetobacter sp. ATCC 27244]
Length = 258
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 70/228 (30%), Gaps = 22/228 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITS 56
M + TRP +A R + +Q GY +PL I S I + S
Sbjct: 1 MRFINTRPQDRADRLTQAMQDAGYQVEHLPLLELIAVPLSEELQQLYQQLDQVQVIVVVS 60
Query: 57 SESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ + H A+G+A+A Q G ++S + + +
Sbjct: 61 PTAVDIGMKYLVKSGLNLHQLAHIRWIAVGQATAKALAQFGIQSDVPEVESSEGMLDLPL 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA----YPETTMKNL 163
++ + + + G L + + + Y+ Q ++ +
Sbjct: 121 LKQQNDL--QKIAFWRGLGGRQFMMQQLQQQGVKIANFVLYHRQCPQQSVFEFPRLLEKM 178
Query: 164 LQNADAILFYARS-SVLYFFSLPLPA--KISAAFLCLSNNIASAIPAS 208
+ + + S + L K +L L + + + +
Sbjct: 179 EPDQPVAVLISSEASWKNWLQLCAQNPCKQKWVYLVLGERLTAILNQA 226
>gi|326317961|ref|YP_004235633.1| uroporphyrinogen-III synthase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374797|gb|ADX47066.1| uroporphyrinogen-III synthase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 279
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/264 (12%), Positives = 65/264 (24%), Gaps = 39/264 (14%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ-------SYGAIAITS 56
++TRP + A + + G V +PL A Q + A+ S
Sbjct: 14 IVTRPERDATQWVVHLHARGIDAVALPLIAIRGCAHPEARAALQAAREAWPRWRAVMFVS 73
Query: 57 SESLSTLPANFCRH-----------TPIFAIGEASACLARQKGFT----QIFHGKDNSIN 101
S + I+A G +A RQ G + +
Sbjct: 74 SNAAHYFLDPPGTGAALFAGDPAALPRIWAPGPGTAQALRQAGVPAEAIDRPAAEATQFD 133
Query: 102 LAKIIVEQKVLFTPQKPLIYLG------------GKPRNFHFEDYLIEHKIPLRVIDCYY 149
+ + ++ + + + Y
Sbjct: 134 SESLWAQVAPQVRQGDRILIVRGAQADGDGTDTVAGTGREWLAQQIAAAGGQAEFVAAYE 193
Query: 150 SQDIAYPETTM---KNLLQNADAILFYARSSVLYF-FSLPLPAKISAAFLCLSNNIASAI 205
+ + + + LF + +V + +LP A L IA A
Sbjct: 194 RGAPDFSAEQLALARAAATDGSLWLFSSSEAVAHLGAALPGQDWSGARALATHPRIAQAA 253
Query: 206 PASYKNVVTVACFPKETSLLKLLP 229
+ V P ++ +
Sbjct: 254 QDAGFGAVRQC-RPALNDVVASIE 276
>gi|304382216|ref|ZP_07364723.1| uroporphyrinogen-III synthase [Prevotella marshii DSM 16973]
gi|304336573|gb|EFM02802.1| uroporphyrinogen-III synthase [Prevotella marshii DSM 16973]
Length = 248
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 68/241 (28%), Gaps = 18/241 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
I+I++P + + + + G V P F +Y A+ TS
Sbjct: 4 KILISQPKPTSEKSPYFDIASEYGVELVFRPFIKVEGLSAKEFRQQKVNLLNYTAVVFTS 63
Query: 57 SESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + + L QK +
Sbjct: 64 RHAIDNYFKLAKEMRVTIPEDMKYFCVTETIALYIQKYVQYRKRKVFFGSTGKIDDLIPT 123
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++ + + + ++ L K+ Y + + + +K + D +
Sbjct: 124 MVKHKAEKYLIPMSDVHSDTIKNLLDAKKLHHHECVMYRTVSNDFTQEEVKAF--DYDMV 181
Query: 171 LFYARSSVLYFFSLPLPAKISAAFLCLS---NNIASAIPASYKNVVTVACFPKETSLLKL 227
+F++ S V + K +C+ A ++ A A P+ S+
Sbjct: 182 VFFSTSGVKALATNFPDMKPEE--ICIGTFGPATAKSVEALGFTPALKAPTPEHPSMTSA 239
Query: 228 L 228
L
Sbjct: 240 L 240
>gi|298345858|ref|YP_003718545.1| uroporphyrinogen-III synthase [Mobiluncus curtisii ATCC 43063]
gi|304390437|ref|ZP_07372390.1| uroporphyrinogen-III synthase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|298235919|gb|ADI67051.1| uroporphyrinogen-III synthase [Mobiluncus curtisii ATCC 43063]
gi|304326193|gb|EFL93438.1| uroporphyrinogen-III synthase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 252
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 71/241 (29%), Gaps = 22/241 (9%)
Query: 2 YIVITR-PIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-----ESVFLAMQQSYGAIAIT 55
+++ R P +++ G V P++ + + + Y + ++
Sbjct: 4 KLLVPRVP---GDVLATGLEQAGLPVVCAPVTEKVPTPSEDWFDPMQRLQSGEYDWVVLS 60
Query: 56 SSESLSTLPAN-----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S + + L A+ + A+G A+A RQ G D + A+ +VE
Sbjct: 61 SVATATFLDAHYDLEDLFAQVQVAAVGSATAEAIRQFDGHVDLVGPDPAC--AESLVEVF 118
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--AD 168
++ G L + + Y S + + L
Sbjct: 119 PA--GTGTVLLPGAVGAAPTLGQGLNRKGYNVEKLRLYESVCLPDLPLEWETALAPGAHT 176
Query: 169 AILFYARSSVLYFFSLPLPAKISAAF--LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+L A S L A + + + A+ + + V +++
Sbjct: 177 YVLITAGSVAHAAHQLLTKAGVKQWPEPIAFGKSSATVLRELGWSAAEVCETTNTEGVVR 236
Query: 227 L 227
Sbjct: 237 A 237
>gi|198274134|ref|ZP_03206666.1| hypothetical protein BACPLE_00271 [Bacteroides plebeius DSM 17135]
gi|198273212|gb|EDY97481.1| hypothetical protein BACPLE_00271 [Bacteroides plebeius DSM 17135]
Length = 248
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/239 (10%), Positives = 62/239 (25%), Gaps = 16/239 (6%)
Query: 2 YIVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPTTEKSPYFDIAEKYGVKIDFRPFIKVESLSAKEFRQQKVSILDHTAVVFTS 64
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + T + + L QK + +
Sbjct: 65 RHAIDHFFSLCAELRVTIPETMKYFCTSETIALYIQKYVQYRKRKVSFGATGKFADLLPQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++ + N +D L ++ I Y + + N D +
Sbjct: 125 IIKHNTEKYFIPMSDVHNDEVKDLLDKNHIQHTEAVMYRTVSNDFTPEE----EFNYDML 180
Query: 171 LFYARSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+F++ + + + + A A+ + + A S+ L
Sbjct: 181 IFFSPAGIQSLMKNFPNFEQKDIAIGSFGPTTAKAVKDAGLRLDLEAPSSVAPSMPAAL 239
>gi|298676008|ref|YP_003727758.1| uroporphyrinogen III synthase HEM4 [Methanohalobium evestigatum
Z-7303]
gi|298288996|gb|ADI74962.1| Uroporphyrinogen III synthase HEM4 [Methanohalobium evestigatum
Z-7303]
Length = 239
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 65/225 (28%), Gaps = 17/225 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAI 54
M + +TR +K T +K G +++P + + + +
Sbjct: 6 MKVAVTRLHEKDDGTYNLFKKYGLDAILIPTIQSREPSDKSSMQTLLKKLESRCIDFLIF 65
Query: 55 TSSESLSTLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
TS+ + T I ++G +A Q G+ S + A + E+
Sbjct: 66 TSTLGVIKFFKWTTEIPDRTKIISVGPKTAEKINQYGYHTEVLDSYYSEHFATHLGEK-- 123
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQNADAI 170
K + + + L + CY + + + + + +
Sbjct: 124 --VSGKTVGITRANTPDSGLKQSLQSMGATVIEGFCYELVETPNELKDYIVDKKID--GV 179
Query: 171 LFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTV 215
+F + S L L + + A ++ V
Sbjct: 180 VFTSTKSFLA-SKLTNSEVKDIITVAIGPKTAESMENHDITPTLV 223
>gi|160891754|ref|ZP_02072757.1| hypothetical protein BACUNI_04210 [Bacteroides uniformis ATCC 8492]
gi|156859161|gb|EDO52592.1| hypothetical protein BACUNI_04210 [Bacteroides uniformis ATCC 8492]
Length = 250
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 65/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSAKEFRQQKISVLDQTAVIFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + ++
Sbjct: 65 RHAIDHFFHLCTELRVTIPETMKYFCVTEAVALYIQKYVQYRKRKIFFGNTGKIDDLIPS 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + N ++ L ++KI Y + + + D
Sbjct: 125 IVK-HKTEKYLVPMSDVHNDDVKNLLDKNKIQHTEAVMYRTV----SNDFAADEAFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + + + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGISALKKNFPDFDQKEIKIGTFGSTTAQAVRDAGLRLDLEAPSVQAPSMTAAL 239
>gi|254454669|ref|ZP_05068106.1| uroporphyrinogen-III synthase domain protein [Octadecabacter
antarcticus 238]
gi|198269075|gb|EDY93345.1| uroporphyrinogen-III synthase domain protein [Octadecabacter
antarcticus 238]
Length = 319
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/232 (12%), Positives = 71/232 (30%), Gaps = 18/232 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMG--YIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+++TRP A R + ++ + + ++ P + + TS +
Sbjct: 99 VIVTRPKADAQRFIDVLRTISGPFSVIISPAFENETLSAEIP-----DFDTAIFTSRAGV 153
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ P R A + ++ A +V + L+
Sbjct: 154 AQAPRGDGRSAFCVGDATA-------TAAKGAGYAAMSADGSADDLVTLILRQRRDVALL 206
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF--YARSSV 178
++ G+ L + + + Y + P +++ L + I+F ++ +V
Sbjct: 207 HIRGEISRGGIAKRLNDAGLKCHEVVAY-RKAAKGPSQPIRDALSVSQNIIFPLFSAETV 265
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ +S+ +A A V V+ P ++ +
Sbjct: 266 -SILETWPLNFEGCTVVAISDVVADASATLLPLNVVVSPAPNVHAMAQATAR 316
>gi|332830240|gb|EGK02868.1| uroporphyrinogen-III synthase [Dysgonomonas gadei ATCC BAA-286]
Length = 252
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 56/210 (26%), Gaps = 14/210 (6%)
Query: 30 PLSYFIHDRESVFL---AMQQSYGAIAITSSESLSTLPANF------CRHTPIFAIGEAS 80
P F Q Y A+ T+ ++ A T + +
Sbjct: 37 PFIRVEGLDAKEFRQQRINIQDYTAVVFTAKTAIDHFFALCEEFRITMPETMKYFCISEA 96
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
L QK S + + ++ I L E KI
Sbjct: 97 VALYLQKYIVYRKRKIFFSTTGKMDGLSTALAKHNKEKFIVPVSDVHTEDLTAVLDEKKI 156
Query: 141 PLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL-CLSN 199
Y + + + + D ++F++ S ++ F K + C
Sbjct: 157 NYTKAIMYRTV----SNNITEEEILSYDMLVFFSPSGIVSLFKNAPHFKQDERAIGCFGA 212
Query: 200 NIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ A A+ + + A P S+ L
Sbjct: 213 STAKAVRDAGLRLDCEAPLPGVPSMTAALE 242
>gi|218290822|ref|ZP_03494891.1| Uroporphyrinogen III synthase HEM4 [Alicyclobacillus acidocaldarius
LAA1]
gi|218239180|gb|EED06381.1| Uroporphyrinogen III synthase HEM4 [Alicyclobacillus acidocaldarius
LAA1]
Length = 247
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/239 (12%), Positives = 70/239 (29%), Gaps = 16/239 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESL 60
+++T+ + + G+ +PL + E+V + A TS+ ++
Sbjct: 6 VIVTQSGDRGAALAAALCDRGFRAEHVPLIDTVPLAEAVSQIGEVAAGSDAWVFTSAAAV 65
Query: 61 ST------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
A FA+G A+ R + + +
Sbjct: 66 RAIASHAPAVAWLRAAPAAFALGSATWRELRAVAPQAVHFLGVRGAR--EFADRLVEVCP 123
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
P I+ G+ + L + Y + + ++ + ++ ++
Sbjct: 124 PSLGFIFPRGRLALEVLPEELRRVGRRVTEWTVYDTVLRLEAADRLAE--RSGEIVVLFS 181
Query: 175 RSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S+V + P ++ +L A A+ + P +L+ L
Sbjct: 182 PSAVSAIAAHPSSGRMFAPGRFTWLPFGGTTARALDHLGIQHLEPPAEPSHEALIHHLE 240
>gi|288803477|ref|ZP_06408909.1| uroporphyrinogen-III synthase [Prevotella melaninogenica D18]
gi|288334087|gb|EFC72530.1| uroporphyrinogen-III synthase [Prevotella melaninogenica D18]
Length = 251
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 64/242 (26%), Gaps = 20/242 (8%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I++++P + + + +G V P F Y A+
Sbjct: 4 KILVSQPKPSSDKSPYYDIT--EDLGVELVFRPFFKVEGLSAKEFRQQKINLLDYTAVVF 61
Query: 55 TSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ F + E A ++ + + ++
Sbjct: 62 TSRHAVDNYFNLAKEMRVTIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGNTGKIDSLI 121
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + + L +K+ + Y + E +KN +
Sbjct: 122 PTMTK-HKTEKYLVPQSSVHTEALSELLDANKLKHKECVMYRTVSNGLTEEEVKNF--DY 178
Query: 168 DAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D ++F++ + V + A + A + A + S+
Sbjct: 179 DMLVFFSPTGVKALKENIPNFEQGDIKIAAFGPATAKEVEAQGLRLDLQAPSQEYPSMTG 238
Query: 227 LL 228
L
Sbjct: 239 AL 240
>gi|146298707|ref|YP_001193298.1| uroporphyrinogen III synthase HEM4 [Flavobacterium johnsoniae
UW101]
gi|146153125|gb|ABQ03979.1| uroporphyrinogen-III synthase [Flavobacterium johnsoniae UW101]
Length = 221
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 64/213 (30%), Gaps = 20/213 (9%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT---PI 73
+++ K+G + + + + + TS ++ ++ +N
Sbjct: 19 QELVKIGIEVIEADFIKTENKPFELKDLNES----LIFTSQNAVHSVLSNPKSEELKSKN 74
Query: 74 FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFED 133
+ + +LA+II + + G R +
Sbjct: 75 VYCVGLKTKTLLSDNGFNVVAYTGYASDLAEIITLIYGNES----YTFFSGNLRRDTLPE 130
Query: 134 YLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA 193
L E I L I Y + + + N +A+LF++ S V +
Sbjct: 131 ALKEAGIKLNEIQVYETTLQP------QKIKANPEALLFFSPSGVKSYLK--DNTINKQL 182
Query: 194 FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
C+ A A+ + +A P +++
Sbjct: 183 CFCIGETTAEALHKI-TKNIIIADQPTIEDVIE 214
>gi|161869721|ref|YP_001598888.1| uroporphyrinogen-III synthase [Neisseria meningitidis 053442]
gi|218767897|ref|YP_002342409.1| uroporphyrinogen-III synthase [Neisseria meningitidis Z2491]
gi|121051905|emb|CAM08211.1| hypothetical protein NMA0988 [Neisseria meningitidis Z2491]
gi|161595274|gb|ABX72934.1| uroporphyrinogen-III synthase HemD, putative [Neisseria
meningitidis 053442]
Length = 246
Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/229 (11%), Positives = 62/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D + L A+ S ++
Sbjct: 2 LIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAAGLELLSEQYARADAVFWVSPTAVE 61
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ-KVLFTPQKP 118
T + + ++ + ++ + ++
Sbjct: 62 TAVPYLNLSDGIKMHISVGQGSRRVLERCLGRTVIAPEDGNDSEAVLRLTVWNSLPEGAR 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 122 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 179
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 180 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 226
>gi|254486721|ref|ZP_05099926.1| uroporphyrinogen-III synthase [Roseobacter sp. GAI101]
gi|214043590|gb|EEB84228.1| uroporphyrinogen-III synthase [Roseobacter sp. GAI101]
Length = 234
Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/228 (16%), Positives = 77/228 (33%), Gaps = 16/228 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQ-KMGYIPVMM--PLSYFIHDRESVFLAMQQSYGAIAITSS 57
M I+ TRP A + I + ++ PL V + + + TS+
Sbjct: 5 MLIL-TRPAPNANAFLDMIAPDLLARVSVLISPLLQISGTATPVLMQGIE---GVIFTSA 60
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
++ P R + +G + A++KG+ G++ A +V + P
Sbjct: 61 NGVAFGPDGLGRT--AYCVGAKTTQAAKEKGWRAQILGQN-----ADELVTALIKTQPNA 113
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARS 176
PL+++ G + L + + + Y + + L I+ ++
Sbjct: 114 PLLHICGHHQRGDIASRLSQAGLRTTAVTVYDQTLLPLSDQAKHVLASGETCIVPLFSPR 173
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ F + LS +A A+ + +A P S+
Sbjct: 174 TATQFARECPDFH-HVVVIALSRAVADALGYQKPQDLLIADEPTANSM 220
>gi|254672851|emb|CBA07065.1| Uroporphyrinogen-III synthase [Neisseria meningitidis alpha275]
Length = 253
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 62/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D + L A+ S ++
Sbjct: 9 LIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAAGLELLSEQYARADAVFWVSPTAVE 68
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ-KVLFTPQKP 118
T + + ++ + ++ + ++
Sbjct: 69 TAVPYLNLSDGIKMHISVGQGSRRVLERCLGRTVIAPEDGNDSEAVLRLTVWNSLPEGAR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E + + Y+ + + +N A + V
Sbjct: 129 VLFVRGHGGRDFLMNALQEKGFRTEMAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 187 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 233
>gi|315023765|gb|EFT36767.1| uroporphyrinogen-III synthase [Riemerella anatipestifer RA-YM]
gi|325335863|gb|ADZ12137.1| uroporphyrinogen-III synthase [Riemerella anatipestifer RA-GD]
Length = 262
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 59/237 (24%), Gaps = 14/237 (5%)
Query: 3 IVITRPIK-KALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSE 58
I+I++P ++ E +K P Y Y I TS
Sbjct: 22 ILISQPQPAESSPYLELAKKEKIEIDFRPFIYVQGADAKDLRTQKIDLSKYTGIIFTSRN 81
Query: 59 SLST---LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
++ L P + I + K K+ + L
Sbjct: 82 AIDHYFRLAEEMRFSVPDSMRYICQSEAIANYLQKHIVYRKRKISFGEKLPTDIIPLLKK 141
Query: 116 Q--KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ + N L E + Y + + + + D ++F+
Sbjct: 142 YPSEKYLLPSSDILNDGITKVLDESGVDWTRAIMYRTVNSDLSDINI----NGYDVLVFF 197
Query: 174 ARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + K N+ + + V VA + S+ L
Sbjct: 198 SPQGIKSLVENFKDYKKSKFKVAVFGNSTKAEAEKAGLTVDIVAPTKENPSMTMALE 254
>gi|313206698|ref|YP_004045875.1| uroporphyrinogen-iii synthase [Riemerella anatipestifer DSM 15868]
gi|312446014|gb|ADQ82369.1| uroporphyrinogen-III synthase [Riemerella anatipestifer DSM 15868]
Length = 247
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 59/237 (24%), Gaps = 14/237 (5%)
Query: 3 IVITRPIK-KALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITSSE 58
I+I++P ++ E +K P Y Y I TS
Sbjct: 7 ILISQPQPAESSPYLELAKKEKIEIDFRPFIYVQGADAKDLRTQKIDLSKYTGIIFTSRN 66
Query: 59 SLST---LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
++ L P + I + K K+ + L
Sbjct: 67 AIDHYFRLAEEMRFSVPDSMRYICQSEAIANYLQKHIVYRKRKISFGEKLPTDIIPLLKK 126
Query: 116 Q--KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ + N L E + Y + + + + D ++F+
Sbjct: 127 YPSEKYLLPSSDILNDGITKVLDESGVDWTRAIMYRTVNSDLSDINI----NGYDVLVFF 182
Query: 174 ARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + K N+ + + V VA + S+ L
Sbjct: 183 SPQGIKSLVENFKDYKKSKFKVAVFGNSTKAEAEKAGLTVDIVAPTKENPSMTMALE 239
>gi|126732177|ref|ZP_01747978.1| hypothetical protein SSE37_17840 [Sagittula stellata E-37]
gi|126707259|gb|EBA06324.1| hypothetical protein SSE37_17840 [Sagittula stellata E-37]
Length = 248
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 77/235 (32%), Gaps = 17/235 (7%)
Query: 1 MY-----IVITRPIKKALRTQEKIQKMGY--IPVMMPLSYFIHDRESVFLAMQQSYGAIA 53
M+ +++TRP R ++ + G P+M PL + +
Sbjct: 1 MHETLPVLLMTRPHAACARFVAELDRAGARFTPIMSPLFQIVQTE---AHLPLDGVRGLI 57
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+S ++ A + I + A Q + A +V++ +
Sbjct: 58 FSSVHGVAAWKARDLQFDMPCYIVGQATAQAAQAAGLRPAIV----QPTAASLVKKMLDT 113
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-F 172
+ PL++L G L + R + Y ++ ET L+ + +
Sbjct: 114 GVEGPLLHLHGTHTRGDIARRLTFDGLYTRAVAVYDQPELELNETARAALVGDVPVVAPV 173
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
++ + AK +S +A A+P + + VA P ++L
Sbjct: 174 FSPRTASLLAR--EKAKAPLLVAAMSEAVALALPPLHIVFLKVADRPDSGAMLAA 226
>gi|329962752|ref|ZP_08300675.1| uroporphyrinogen-III synthase [Bacteroides fluxus YIT 12057]
gi|328529586|gb|EGF56489.1| uroporphyrinogen-III synthase [Bacteroides fluxus YIT 12057]
Length = 250
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/240 (9%), Positives = 67/240 (27%), Gaps = 18/240 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + A+ TS
Sbjct: 5 KVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESLSSKEFRQQKVSILDHTAVVFTS 64
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + EA A ++ + + ++
Sbjct: 65 RHAIDHFFHLCTELRVTIPETMKYFCVSEAIALYIQKYVQYRKRKIFFGNTGKFDDLLPA 124
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + + ++ L ++KI + Y + + + D
Sbjct: 125 IIK-HKTEKYLVPMSDVHTDEIKNLLDKNKIQHTEVVMYRTV----SNDFGADEKFDYDM 179
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + + + + A A+ + + A + S+ L
Sbjct: 180 LVFFSPAGISALKKNFPDFEQKEIKIGTFGSTTAQAVRDAGLRLDLEAPSVQAPSMTAAL 239
>gi|300774817|ref|ZP_07084680.1| uroporphyrinogen-III synthase [Chryseobacterium gleum ATCC 35910]
gi|300506632|gb|EFK37767.1| uroporphyrinogen-III synthase [Chryseobacterium gleum ATCC 35910]
Length = 247
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 63/245 (25%), Gaps = 21/245 (8%)
Query: 1 MYI---VITRPIK-KALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M I ++++P ++ + +K P + Y I
Sbjct: 2 MRIKSILVSQPAPSESSPYLDIAKKEKIKIDFRPFIHVEGVDNKELRTQKIDLTQYTGII 61
Query: 54 ITSSESLST-------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
TS ++ L EA A ++ + N + ++
Sbjct: 62 FTSKNAIDHYFRLAEELRFAVPDTMRYICQSEAIANYLQKHIVYRKRKISFGEKNFSDLL 121
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
K P + + + + + Y + + +K+
Sbjct: 122 PLFKKF--PTEKYLLPSSDVLSPDIVKTMDASNVDWTRAIMYRTVCSDLTDINVKDY--- 176
Query: 167 ADAILFYARSSVLYFFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F++ + + N +A + V +A + S+
Sbjct: 177 -DMLIFFSPQGIKSLQQNFPDFKQEETKIGVFGNTTLAAAEEAGLKVDLMAPTKETPSMT 235
Query: 226 KLLPL 230
L
Sbjct: 236 MALEK 240
>gi|319410144|emb|CBY90480.1| uroporphyrinogen-III synthase (UROS; uroporphyrinogen-III
cosynthetase; hydroxymethylbilane hydrolyase
[cyclizing]) [Neisseria meningitidis WUE 2594]
Length = 253
Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/229 (11%), Positives = 62/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D + L A+ S ++
Sbjct: 9 LIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAAGLELLSEQYARADAVFWVSPTAVE 68
Query: 62 TLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ-KVLFTPQKP 118
T + + ++ + ++ + ++
Sbjct: 69 TAVPYLNLSDGIKMHISVGQGSRRVLERCLGRTVIAPEDGNDSEAVLRLTVWNSLPEGAR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 129 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 187 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 233
>gi|83950379|ref|ZP_00959112.1| hypothetical protein ISM_04755 [Roseovarius nubinhibens ISM]
gi|83838278|gb|EAP77574.1| hypothetical protein ISM_04755 [Roseovarius nubinhibens ISM]
Length = 237
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/231 (16%), Positives = 67/231 (29%), Gaps = 18/231 (7%)
Query: 3 IVITRPIKKALRTQEKIQK-MGYIP--VMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
++ITRP + + +G V PL + ++ +TS +
Sbjct: 5 LLITRPSPDDVEFARDARHVLGADVPVVRAPLIEIEPL----AIPDPGDAMSLILTSKHA 60
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
L P +G + + A +++ P P
Sbjct: 61 LFAAPLGLPLWVVGPKLGALARAAGHD---------LRHVAPDAAHLLDHFKHSPPPTPA 111
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSV 178
++L G L Y+ L IL ++ +
Sbjct: 112 LHLHGNHMACDVAAALRAMGHAALDHAVYHQHQRPLTAEARTLLEGETAVILPLFSPRTC 171
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
FF A+ L LSN +A+ +P V VA P ++L LP
Sbjct: 172 HIFFQDA-AARAPLVVLALSNAVAARVPRGAARAVIVADRPDAEAILMALP 221
>gi|169797471|ref|YP_001715264.1| uroporphyrinogen-III synthase [Acinetobacter baumannii AYE]
gi|213155715|ref|YP_002317760.1| uroporphyrinogen-III synthase [Acinetobacter baumannii AB0057]
gi|215484907|ref|YP_002327146.1| Uroporphyrinogen-III synthase [Acinetobacter baumannii AB307-0294]
gi|301346815|ref|ZP_07227556.1| uroporphyrinogen-III synthase [Acinetobacter baumannii AB056]
gi|301512647|ref|ZP_07237884.1| uroporphyrinogen-III synthase [Acinetobacter baumannii AB058]
gi|301595531|ref|ZP_07240539.1| uroporphyrinogen-III synthase [Acinetobacter baumannii AB059]
gi|332851471|ref|ZP_08433468.1| uroporphyrinogen-III synthase [Acinetobacter baumannii 6013150]
gi|332866847|ref|ZP_08437234.1| uroporphyrinogen-III synthase [Acinetobacter baumannii 6013113]
gi|169150398|emb|CAM88295.1| uroporphyrinogen-III synthase (UROS) (Uroporphyrinogen-III
cosynthetase) (Hydroxymethylbilane hydrolyase
[cyclizing]) [Acinetobacter baumannii AYE]
gi|213054875|gb|ACJ39777.1| uroporphyrinogen-III synthase [Acinetobacter baumannii AB0057]
gi|213986291|gb|ACJ56590.1| Uroporphyrinogen-III synthase [Acinetobacter baumannii AB307-0294]
gi|332729924|gb|EGJ61255.1| uroporphyrinogen-III synthase [Acinetobacter baumannii 6013150]
gi|332734375|gb|EGJ65496.1| uroporphyrinogen-III synthase [Acinetobacter baumannii 6013113]
Length = 255
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 23/221 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----YGAIAITS 56
M + TRP +A +Q G+ +PL + S L+ AI + S
Sbjct: 1 MLFINTRPDSRAAELTHALQNKGFQVESLPLLELVAQPFSESLSQLYQQLTGAQAIVVVS 60
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ +H A+G+A+A G + S + + +
Sbjct: 61 PTAVDVGMQYLTQSGLKIDELKHIQWIAVGQATANRLHDYGIEAHVPEVETSEGMLNLPL 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
+ + + G+ + L + I + Y Q +T K
Sbjct: 121 LHCMQ--KSGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYRRQCPQASYSTFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLP--LPAKISAAFLCLSNN 200
N + +L + +S Y+ L A+ +L L
Sbjct: 179 NYNLDKWLVLITSEASWKYWLELCLKNKAQPDCVYLVLGPR 219
>gi|326335019|ref|ZP_08201219.1| uroporphyrinogen-III synthase domain protein [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325692824|gb|EGD34763.1| uroporphyrinogen-III synthase domain protein [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 225
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 66/213 (30%), Gaps = 22/213 (10%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPAN----FCRHT 71
+ + G+ M I R+ + Q TS + +L N
Sbjct: 15 IQLFSQAGFSVEAMSFIEIIPQRD---IPPFQPSDFYLFTSQNAFLSLIENPIYKIISSK 71
Query: 72 PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHF 131
F +GE + L + + I + + +I + + G R
Sbjct: 72 KAFCVGEKTKKLLKNNHWNVIASFEYAHELGSYLIDQYQEA-----SFTLFCGDRRLDTL 126
Query: 132 EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS 191
+ + ++KI + I Y + + D ILF++ S+V F +
Sbjct: 127 PNIMKKNKIKFQEILTYRTLLTPIKVEKL------FDGILFFSPSAVESFLQV--NHFRD 178
Query: 192 AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
C+ + A+P +A P S+
Sbjct: 179 EHIFCIGSTTQKALPKE--INSYLAKTPTIESV 209
>gi|268596405|ref|ZP_06130572.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae FA19]
gi|268550193|gb|EEZ45212.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae FA19]
Length = 247
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D S+ + A+ S ++
Sbjct: 2 LIVRPSGRAKDDVEVCRRAGWQAEVLSPIEIETDEASLKRLPEMYARADAVFWVSPTAVE 61
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I A + S + +F +D + + A + +
Sbjct: 62 TAVPYLNLSDGIKAHIAVGQGSRRALARYAGAGVFAPEDGNDSEAVLRLPVWNSLPEGAR 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ + G + L E V + Y+ + + +N A + V
Sbjct: 122 VLSVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 179
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F+ P S + IA A+ V P +
Sbjct: 180 QSLFAQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 226
>gi|262280695|ref|ZP_06058478.1| uroporphyrinogen-III synthase [Acinetobacter calcoaceticus RUH2202]
gi|262257595|gb|EEY76330.1| uroporphyrinogen-III synthase [Acinetobacter calcoaceticus RUH2202]
Length = 255
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 72/229 (31%), Gaps = 23/229 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ----SYGAIAITS 56
M + TRP +A E +Q GY +PL + S L AI + S
Sbjct: 1 MLFINTRPDSRAAELTEVLQNEGYQVESLPLLELVAKPFSEHLLQLYQQLVKAQAIVVVS 60
Query: 57 SESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ +H A+G+++A + G + S + + +
Sbjct: 61 PTAVDVGMKYLLQSGLKLSDLKHIQWVAVGQSTANCLNEYGIEAHIPDVETSEGMLTLPI 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
+ + + G+ + L + I + Y+ Q +T K
Sbjct: 121 LYNMQ--QTGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYHRQCPEASYSTFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKIS--AAFLCLSNNIASAIPAS 208
N N +L + +S Y+ L + +L L + +
Sbjct: 179 NYNLNKWLVLITSEASWKYWLELCSKNNVQPDCVYLVLGPRLFQIVKEY 227
>gi|184156605|ref|YP_001844944.1| uroporphyrinogen-III synthase [Acinetobacter baumannii ACICU]
gi|332874911|ref|ZP_08442762.1| uroporphyrinogen-III synthase [Acinetobacter baumannii 6014059]
gi|183208199|gb|ACC55597.1| Uroporphyrinogen-III synthase [Acinetobacter baumannii ACICU]
gi|322506492|gb|ADX01946.1| hemD [Acinetobacter baumannii 1656-2]
gi|323516371|gb|ADX90752.1| uroporphyrinogen-III synthase [Acinetobacter baumannii TCDC-AB0715]
gi|332736854|gb|EGJ67830.1| uroporphyrinogen-III synthase [Acinetobacter baumannii 6014059]
Length = 255
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 23/221 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----YGAIAITS 56
M + TRP +A +Q G+ +PL + S L+ AI + S
Sbjct: 1 MLFINTRPDSRAAELTHALQNKGFQVESLPLLELVAQPFSESLSQLYQQLTGAQAIVVVS 60
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ +H A+G+A+A G + S + + +
Sbjct: 61 PTAVDVGMQYLTQSGLKIDELKHIQWIAVGQATANRLHDYGIEAHVPEVETSEGMLNLPL 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
+ + + G+ + L + I + Y Q +T K
Sbjct: 121 LHHMQ--KSGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYRRQCPQASYSTFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLP--LPAKISAAFLCLSNN 200
N + +L + +S Y+ L A+ +L L
Sbjct: 179 NYNLDKWLVLITSEASWKYWLELCLKNKAQPDCVYLVLGPR 219
>gi|46199445|ref|YP_005112.1| putative uroporphyrinogen-III synthase hemD [Thermus thermophilus
HB27]
gi|46197071|gb|AAS81485.1| putative uroporphyrinogen-III synthase hemD [Thermus thermophilus
HB27]
Length = 225
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 76/233 (32%), Gaps = 19/233 (8%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
++TR +AL + +G + L + L+ +++ + +A+TS E
Sbjct: 2 LLTRGKDRALLARLA--ALGIEAAEVALLEQVDLPARALLSEKLKEGWDYVAVTSKEGAK 59
Query: 62 ----TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ A+GE +A + R G F + F +
Sbjct: 60 RLLLAWEEAGRPFLRVAAVGEGTAGVLRAGGLPPAFLPPRATAKDLA------QSFPQAQ 113
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++++ G E+ L + + + Y +++ A + LL+ A+ + F++ S
Sbjct: 114 RVLFVAGDLAGRDLEEGLRARGVEVVRLPVYATRERALAPEEV-ALLERAEVVAFFSPSG 172
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
V F + + VV A P L L
Sbjct: 173 VRAF---ARWTAKRPKAAAIGPSTGEEARRLGFPVV-EAESPGLEGLFAALLR 221
>gi|18313455|ref|NP_560122.1| uroporphyrinogen-III synthase (hemD), conjectural [Pyrobaculum
aerophilum str. IM2]
gi|18160991|gb|AAL64304.1| uroporphyrinogen-III synthase (hemD), conjectural [Pyrobaculum
aerophilum str. IM2]
Length = 273
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 66/253 (26%), Gaps = 28/253 (11%)
Query: 3 IVIT--RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAITSSE 58
++IT RP KA + I K G PV +P + + A+ + +
Sbjct: 14 VIITSGRPS-KAELLAKLIIKAGGEPVYLPTVKVEESGSDISTVIGHLTWSQAVLFMTGQ 72
Query: 59 SLSTLPANFCRHTPIFAIG---------EASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
S L R + + + + +++V
Sbjct: 73 SAWGLAELAKRAQRLEEVRTLLSQRELLCRGMKASGNVKTHFHLECPNYGETSDELLVRA 132
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNA 167
K L+ + + L + ++ + Y +++ + L+
Sbjct: 133 AEALRG-KRLVVSFYGAVDSELLEELRKIAADVKYVQVYTTEEAPEANALEAARRFLEGN 191
Query: 168 DAILFYARSSVLYFFSLPLPAKI-----------SAAFLCLSNNIASAIPASYKNVVTVA 216
++F + F A I + + + V V
Sbjct: 192 HILIFTSALGAEAFLKAVERAGILREVVETANSGRSVIAVVGPVTEQEVRKYGVTRVIVP 251
Query: 217 CFPKETSLLKLLP 229
P L + +
Sbjct: 252 EKPFLAYLAEAVA 264
>gi|260556363|ref|ZP_05828582.1| uroporphyrinogen-III synthase [Acinetobacter baumannii ATCC 19606]
gi|260410418|gb|EEX03717.1| uroporphyrinogen-III synthase [Acinetobacter baumannii ATCC 19606]
Length = 255
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 71/221 (32%), Gaps = 23/221 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----YGAIAITS 56
M + TRP +A +QK G+ +PL + S L+ AI + S
Sbjct: 1 MLFINTRPDSRAAELTHALQKKGFQVESLPLLELVAQPFSESLSQLYQQLTGAQAIVVVS 60
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ +H A+G+A+A G + S + + +
Sbjct: 61 PTAVDVGMQYLTQSGLKIDELKHIQWIAVGQATANRLHDYGIEAHVPEVETSEGMLNLPL 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
++ + + G+ + L + I + Y Q +T K
Sbjct: 121 LHRMQ--KSGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYRRQCPQASYSTFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLP--LPAKISAAFLCLSNN 200
N + +L + +S Y+ L A+ +L L
Sbjct: 179 NYNLDKWLVLITSEASWKYWLELCLKNKAQPDCVYLVLGPR 219
>gi|157964653|ref|YP_001499477.1| hypothetical protein RMA_0810 [Rickettsia massiliae MTU5]
gi|157844429|gb|ABV84930.1| hypothetical protein RMA_0810 [Rickettsia massiliae MTU5]
Length = 242
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/237 (15%), Positives = 80/237 (33%), Gaps = 26/237 (10%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYI--PVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ T ++I K + PL + ++ + +Y I ITS
Sbjct: 18 MKSVLLTRHIEENNETIKEISKYNLDLRDIHCPLIKYKTLDFNIDI--LDNYSNIIITSK 75
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ S L I+ +G S L +K + + +++ ++
Sbjct: 76 YAASILLTGHNLKQDIWVVGSKSKRLLGKK--------VMYTAKNVEDLIKHFPPDLYEQ 127
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + + + P + +K N D IL Y+++S
Sbjct: 128 TIYLSSNEITKDLPSKIARHIIYNVEYL-------NELPVSIIKEFKNNIDFILLYSQNS 180
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L L + + + +S +A+ + + V ++KLL
Sbjct: 181 AKTLVKLLLQNNLLEYLQDSLVVAISLKVANIVR-PFIKNVVYCDDQNLNDIIKLLS 236
>gi|193076129|gb|ABO10738.2| uroporphyrinogen-III synthase [Acinetobacter baumannii ATCC 17978]
Length = 255
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 71/221 (32%), Gaps = 23/221 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----YGAIAITS 56
M + TRP +A +QK G+ +PL + S L+ AI + S
Sbjct: 1 MLFINTRPDSRAAELTHALQKKGFQVESLPLLELVAQPFSESLSQLYQQLTGAQAIVVVS 60
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ ++ A+G+A+A G + S + + +
Sbjct: 61 PTAVDVGMQYLTQSGLKIDELKYIQWIAVGQATANRLHDYGIEAHVPEVETSEGMLNLPL 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
++ + + G+ + L + I + Y Q +T K
Sbjct: 121 LHRMQ--KSGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYRRQCPQASYSTFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLP--LPAKISAAFLCLSNN 200
N + +L + +S Y+ L A+ +L L
Sbjct: 179 NYNLDKWLVLITSEASWKYWLELCLKNKAQPDCVYLVLGPR 219
>gi|107023361|ref|YP_621688.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia cenocepacia AU 1054]
gi|116690444|ref|YP_836067.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia cenocepacia HI2424]
gi|105893550|gb|ABF76715.1| protein of unknown function DUF513, hemX [Burkholderia cenocepacia
AU 1054]
gi|116648533|gb|ABK09174.1| protein of unknown function DUF513, hemX [Burkholderia cenocepacia
HI2424]
Length = 656
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 65/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSDALAAQLADAGCDVLEFPLIDIAPVDDPAPLDAAFAALADYALVIFVSPNA 70
Query: 60 LSTLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ A + P+ +G S + G H A V +
Sbjct: 71 IDRALARYDAIWPNALPVGVVGPGSVAALERHGIAAPAHRVIAPQAPADGGVPHYDSESL 130
Query: 116 Q---------------KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY---PE 157
K ++ + G + L E + ++ Y
Sbjct: 131 FASIEVAFGGAQALAGKRVLIVRGDGGREWLAERLREAGADVTLVAAYRRVVPEPRVGAW 190
Query: 158 TTMKNLLQ-NADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPAS 208
+ LL L + V L A A + I A
Sbjct: 191 ERVHALLDGQPHGWLVTSSEGVRNLHELARAHLNEAEIDALKHAPLVTPHPRIEQTARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|148554853|ref|YP_001262435.1| uroporphyrinogen III synthase HEM4 [Sphingomonas wittichii RW1]
gi|148500043|gb|ABQ68297.1| Uroporphyrinogen III synthase HEM4 [Sphingomonas wittichii RW1]
Length = 229
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 19/225 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
++I RP A T ++ G+ PV+ P+ Y A+ +TS+ ++
Sbjct: 6 LLILRPEPGASMTAKRAFGEGWRPVVSPIFRIEPIAWGA--PPAGDYDALFVTSANAVRQ 63
Query: 63 LPANFCRH--TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ P +A+G+A+A + GFT I G+ ++ + +
Sbjct: 64 AGKAIRPYAVIPAYAVGDATARALKAAGFTDIHTGRGDAAAMLETAAAN----------G 113
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQNADAILFYARSSVL 179
I + Y S I + + + L + A+L ++ +
Sbjct: 114 VARALHLAGEDHRDAGLDAIAIDRRIVYRSAAIERFGDKALAALREGGGAVLLHSGRAAE 173
Query: 180 YFFSL---PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+F L ++ L+ + A + A P +
Sbjct: 174 HFARLCDGARISRRHVRIAALAPAVLDAAGS-GWRAGIAADKPDD 217
>gi|20091852|ref|NP_617927.1| uroporphyrinogen-III synthase [Methanosarcina acetivorans C2A]
gi|19917043|gb|AAM06407.1| uroporphyrinogen-III synthase [Methanosarcina acetivorans C2A]
Length = 279
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 67/257 (26%), Gaps = 37/257 (14%)
Query: 5 ITRPI---KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS-----YGAIAITS 56
I RP +K+ + G+ PV +P+ ++ VF Q + TS
Sbjct: 20 IMRPESYREKSEAIA---RDYGFEPVYVPMIQLEGLKDEVFEPFVQRVVKGTSDYVVFTS 76
Query: 57 SESLSTLPANFCRHTP-----------IFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ ++ + + AIG + + G + F D S +
Sbjct: 77 ANGITFTLDKLTKPEKEKFIAALKKTRVIAIGPNTEKELVKIGIEKPFLPGDYSS---EG 133
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET---TMKN 162
IVE K + + L + + Y +
Sbjct: 134 IVEALCPEVKGKTIDLARSAFGAKVLIEGLEQCGATVYETHVYTLSIPEGAAQKELIERT 193
Query: 163 LLQNADAILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVV 213
L DA F + V F A + + + N
Sbjct: 194 LAGEVDAFAFTSSMMVRGFMKHAEKLGAKDTIKETLSRAVVGAIGTPTGNTLEKYGVNAD 253
Query: 214 TVACFPKETSLLKLLPL 230
+ +L+K +
Sbjct: 254 VIPEEFTFEALVKAMKK 270
>gi|169829409|ref|YP_001699567.1| uroporphyrinogen-III synthase [Lysinibacillus sphaericus C3-41]
gi|168993897|gb|ACA41437.1| Uroporphyrinogen-III synthase [Lysinibacillus sphaericus C3-41]
Length = 253
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 64/229 (27%), Gaps = 18/229 (7%)
Query: 14 RTQEKIQKMGYIPVMMPLSYFIH---DRESVFLAMQQSYGAIAITSSESLSTLPANFCRH 70
+ I +G V+ PL + ++ + + + TS ++ RH
Sbjct: 22 AIVDDIAALGGHAVIAPLIETCERMDNNDAKLMNSALQFDWVIFTSQNAVDAFANKMGRH 81
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
I + T+ +N + K + G +
Sbjct: 82 Q----ISAKNFRAKIASIGTKTTTALENLGFQVSFMPSVFSADIFVKEFPNIAGDHPSCL 137
Query: 131 FEDYLIEHK-------IPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSVLYF 181
F L+ Y + + + N +Q+ + ++F + S+V +
Sbjct: 138 FIRGEKAKSTLKDGLPFNLKEWTVYETIERQDQTLAIINCIQHNEDVTVIFASPSAVDVY 197
Query: 182 FSLPLPA--KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + +A+ V + ++++ L
Sbjct: 198 AKSVAVHVGWQATRVAAIGHITEAALEQYGATVDIMPSVYTMQAVIEEL 246
>gi|224023483|ref|ZP_03641849.1| hypothetical protein BACCOPRO_00185 [Bacteroides coprophilus DSM
18228]
gi|224016705|gb|EEF74717.1| hypothetical protein BACCOPRO_00185 [Bacteroides coprophilus DSM
18228]
Length = 248
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/226 (11%), Positives = 60/226 (26%), Gaps = 16/226 (7%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+++++P + + + +K G P F + AI TS
Sbjct: 5 KVLVSQPKPTSEKSPYFDIAEKYGVKIDFRPFIKVESLSAKEFRQQKVSILDHTAIVFTS 64
Query: 57 SESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ T + + L QK +
Sbjct: 65 RHAIDHFFNLCVELRVTIPETMKYFCTSETIALYIQKYVQYRKRKVFFGATGKFADLVPL 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
++ + N +D L ++KI Y + + M + D +
Sbjct: 125 MVKHNTEKYFVPMSDVHNDEVKDLLDKNKIQHTEAVMYRTVSNDFKPEEM----SDYDML 180
Query: 171 LFYARSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTV 215
+F++ + + + + C A A+ + +
Sbjct: 181 VFFSPAGIQSLMKNFPGFEQKDIAIGCFGPTTAKAVKEAGLRLDLE 226
>gi|325281342|ref|YP_004253884.1| Uroporphyrinogen III synthase HEM4 [Odoribacter splanchnicus DSM
20712]
gi|324313151|gb|ADY33704.1| Uroporphyrinogen III synthase HEM4 [Odoribacter splanchnicus DSM
20712]
Length = 253
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 63/241 (26%), Gaps = 18/241 (7%)
Query: 2 YIVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITS 56
I++++P + E +K G P + AI TS
Sbjct: 5 KILVSQPQPTTEKSPYSELAEKYGLKLEFRPFIKVEGVTAKEFRQERINILDHTAIIFTS 64
Query: 57 SESLSTLPANF-------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F I EA+A ++ + + + +
Sbjct: 65 RTAIDHFFRICGELRITVPDTMKYFCISEATAFYLQKYIVYRKRKIFYGDKKVDDM--TK 122
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+L + + + L + + Y + + L+ D
Sbjct: 123 ILLKHKTENFLVPLSDIHKENIPGLLDQLNLKYTKAILYKTVSSDLSD---IKNLKEYDI 179
Query: 170 ILFYARSSVLYFFSLPLPAKISAAFLC-LSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
I FY S + F + A A+ + + A P+ S+ +
Sbjct: 180 IAFYTPSGIKSLFQNFPDFVQDTTVIAAFGPATAVAVEEAGLRLDIKAPTPQCPSMTMAI 239
Query: 229 P 229
Sbjct: 240 E 240
>gi|240080255|ref|ZP_04724798.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae FA19]
gi|240123048|ref|ZP_04736004.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae PID332]
gi|260440974|ref|ZP_05794790.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae DGI2]
gi|268681675|ref|ZP_06148537.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae PID332]
gi|291044302|ref|ZP_06570011.1| uroporphyrinogen-III synthetase [Neisseria gonorrhoeae DGI2]
gi|268621959|gb|EEZ54359.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae PID332]
gi|291011196|gb|EFE03192.1| uroporphyrinogen-III synthetase [Neisseria gonorrhoeae DGI2]
Length = 254
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D S+ + A+ S ++
Sbjct: 9 LIVRPSGRAKDDVEVCRRAGWQAEVLSPIEIETDEASLKRLPEMYARADAVFWVSPTAVE 68
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I A + S + +F +D + + A + +
Sbjct: 69 TAVPYLNLSDGIKAHIAVGQGSRRALARYAGAGVFAPEDGNDSEAVLRLPVWNSLPEGAR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ + G + L E V + Y+ + + +N A + V
Sbjct: 129 VLSVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F+ P S + IA A+ V P +
Sbjct: 187 QSLFAQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 233
>gi|241760077|ref|ZP_04758175.1| uroporphyrinogen-III synthase [Neisseria flavescens SK114]
gi|241319531|gb|EER55961.1| uroporphyrinogen-III synthase [Neisseria flavescens SK114]
Length = 707
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 64/236 (27%), Gaps = 16/236 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD--RESVFLAMQQSYGAIAITSSESL 60
++I RP + + + G+ ++ D + + + S ++
Sbjct: 4 LLIIRPSNRPQQDIQTCHTAGWQAQVLSPIEIEVDRSAQKKLPEQFKQADVVFWVSPTAI 63
Query: 61 STLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII-VEQKVLFTPQK 117
T + ++ + ++ + ++ + P
Sbjct: 64 ETAAPHLNFSDGHKAHITVGQTSQHTLAQFSPYPVFSPEDGNDSEAVLRMPIWKNLPPNA 123
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + G D L E + + + Y+ + A K ++ A +
Sbjct: 124 RVLIIRGHGGRDFLADKLTELGFQIDIAEIYFRRPHAIDWQNFKT--EDIAAAYVTSGEL 181
Query: 178 VLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
FF P S + IA A+ V TSL L
Sbjct: 182 AREFFHQIPPQFSRFFESLLYFTHHPRIADALRIVGAKHVE-----TVTSLSAALS 232
>gi|268594408|ref|ZP_06128575.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae 35/02]
gi|268683902|ref|ZP_06150764.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae SK-92-679]
gi|2580594|gb|AAD13643.1| Gly1ORF2 [Neisseria gonorrhoeae]
gi|268547797|gb|EEZ43215.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae 35/02]
gi|268624186|gb|EEZ56586.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae SK-92-679]
Length = 247
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D S+ + A+ S ++
Sbjct: 2 LIVRPSGRAKDDVEVCRRAGWQAEVLSPIEIETDEASLKRLPEMYARADAVFWVSPAAVE 61
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I A + S + +F +D + + A + +
Sbjct: 62 TAVPYLNLSDGIKAHIAVGQGSRRALARYAGAGVFAPEDGNDSEAVLRLPVWNSLPEGAR 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ + G + L E V + Y+ + + +N A + V
Sbjct: 122 VLSVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 179
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F+ P S + IA A+ V P +
Sbjct: 180 QSLFAQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 226
>gi|260593355|ref|ZP_05858813.1| uroporphyrinogen-III synthase [Prevotella veroralis F0319]
gi|260534631|gb|EEX17248.1| uroporphyrinogen-III synthase [Prevotella veroralis F0319]
Length = 251
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 66/240 (27%), Gaps = 16/240 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITS 56
I++++P + + + +G V P F Y A+ TS
Sbjct: 4 KILVSQPKPSSDKSPYYDIASDLGVELVFRPFFKVEGLTAKEFRQQKINLLDYTAVVFTS 63
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + E A ++ + + ++
Sbjct: 64 RHAVDNFFNLAKEMRITIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGTTGKIDSLIPT 123
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + + N L +K+ + Y + + +KN + D
Sbjct: 124 MLKHKG-EKYLVPQSSVHNDSISALLDVNKLKHKECVMYRTVSNGLTDEEVKNF--DYDM 180
Query: 170 ILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V K A + A + A + TS+ L
Sbjct: 181 LIFFSPTGVKALKENIPDFKQGDVKVAAFGPATAKEVEAQGLKLDLQAPSTQHTSMTGAL 240
>gi|190572246|ref|YP_001970091.1| uroporphyrinogen-III synthase [Stenotrophomonas maltophilia K279a]
gi|190010168|emb|CAQ43776.1| putative uroporphyrinogen-iii synthase (uros) (uroporphyrinogen-iii
cosynthetase) (hydroxymethylbilane hydrolyase
[cyclizing]) [Stenotrophomonas maltophilia K279a]
Length = 266
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 68/235 (28%), Gaps = 16/235 (6%)
Query: 7 RPIKKALRTQEKIQKMGYIPVMMP---LSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
RP + + + +G V +P L L + + TS +++
Sbjct: 23 RPQGQNSALRRAVAGLGGHVVALPPWRLQRLNGMPVVRQLQRALNCDRVVFTSPAAVAAA 82
Query: 64 PANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + +P +GE +A R +G ++ + ++ + +
Sbjct: 83 ASLLPLAEAQRSPWLTVGEGTARALRAQGVGEVHAPQRMDS--EGLLALPVLAEARGLRI 140
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--LLQNADAILFYARSS 177
+ +L + D Y + + P T+ + + +
Sbjct: 141 GLVTAPGGRGLIAAHLQAAGATIERADVYQRRLLRLPPRTLARLPHSAQPWVLAVSSGEA 200
Query: 178 VLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ +F+ PA A + S + A V A P L+
Sbjct: 201 LQHFWQQLPPALQQRLQAQATVVVASERLGDQAHALGLQRVVRAAGPTTAQLVAA 255
>gi|307155224|ref|YP_003890608.1| Uroporphyrinogen III synthase HEM4 [Cyanothece sp. PCC 7822]
gi|306985452|gb|ADN17333.1| Uroporphyrinogen III synthase HEM4 [Cyanothece sp. PCC 7822]
Length = 286
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 74/254 (29%), Gaps = 26/254 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE------SVFLAMQQSYGAIAIT 55
I+IT P A R ++I G +P++M E L + I+ T
Sbjct: 16 RIIITAPRNYAGRLAQEIINSGGLPMIMSTIETCLLEEENYQALDQALKQINRFNWISFT 75
Query: 56 SSESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S + + + + AIG ++ L + + + + +
Sbjct: 76 SRQGIEAVYQRLLTLKISLSELNQCQLCAIGADASRLTELGLTVSLIPQESSPQGIVNEL 135
Query: 107 VEQ-----KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA---YPET 158
+ + + P ++ + +F L + K+ ++ + Y + + Y
Sbjct: 136 AKMPNLLGQEILVPVPEVVGITEPDIIPNFVQSLEQLKLKVQRVPAYKTCGLDQKLYAVE 195
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLP--LPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
D I F + + V F A + C A VA
Sbjct: 196 LELIHTGKIDVIAFSSSAEVEAFLQWVDSPKALAATIPACFGPYTAKNAAKLGIIPAIVA 255
Query: 217 CFP-KETSLLKLLP 229
+K +
Sbjct: 256 QDYRSYAGFVKAIA 269
>gi|74008923|ref|XP_854146.1| PREDICTED: similar to Uroporphyrinogen-III synthase (UROS)
(Uroporphyrinogen-III cosynthetase) (Hydroxymethylbilane
hydrolyase [cyclizing]) (UROIIIS) [Canis familiaris]
Length = 217
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 53/173 (30%), Gaps = 10/173 (5%)
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
++ +G A+A L + G N+ LA+ I +P P
Sbjct: 35 VWKHSLKEKWNAKTVYVVGNATASLVNKIGLDAEGANCGNAEKLAEYI---CSRESPALP 91
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI---LFYAR 175
L++ G + L + IP+ I Y + + + F++
Sbjct: 92 LLFPCGTVKGEILPQMLKDRGIPMESITVYQKVPHPGIQVNLNSYYAKQGIPASITFFSP 151
Query: 176 S----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
S S+ + L F + + A A+ A V A P L
Sbjct: 152 SGLAYSLKHIQELSGDNIDRIKFAAIGPSTARALAAQGLPVSCTAESPTPQGL 204
>gi|315186776|gb|EFU20534.1| uroporphyrin-III C-methyltransferase [Spirochaeta thermophila DSM
6578]
Length = 661
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/217 (14%), Positives = 64/217 (29%), Gaps = 25/217 (11%)
Query: 2 YIVIT--RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
+I++T R + G V +P + R+ + SY + TS
Sbjct: 452 HILVTGTRAAPW--------RARG-EVVHIPCIATVPRRDKRVQEVMEGLSSYTMLIFTS 502
Query: 57 SESLSTLPANFCRH--------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ H + AIG +A R++G +++S +I
Sbjct: 503 RHGVVHFVDRLLEHGDLRLLAGKRVVAIGRVTAEALRERGLVPDLIPEEDSA--EGLISL 560
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ ++ + ++ L + + Y + +YPE + D
Sbjct: 561 ATQEDWRGEKILIPCSSLSDPFLQEELSRRGNTVDAVPFYDTVPASYPEALPLEV-GAFD 619
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAI 205
++F + S V F A+
Sbjct: 620 EVVFLSPSGVRVFRERFGALPPGIRIHTPGVTTRRAL 656
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/202 (8%), Positives = 43/202 (21%), Gaps = 10/202 (4%)
Query: 36 HDRESVFLAMQQSYGAIAIT-----SSESLSTLPANFCRHTPIFAIGEASACLARQKGFT 90
++ + + L A + HTP+ + A+ T
Sbjct: 359 PPERALIPPPDERLSCVYYMAGEEFPRICARFLEAGWDPHTPVVVVSAAARPQQTHLSLT 418
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
+ ++ + + +
Sbjct: 419 LEDGARWTGSVPRPALLLVGATGVSRSWWEDRPHILVTGTRAAPWRARGEVVHIPCIATV 478
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAK-----ISAAFLCLSNNIASAI 205
+ L + ++F +R V++F L + + A A+
Sbjct: 479 PRRDKRVQEVMEGLSSYTMLIFTSRHGVVHFVDRLLEHGDLRLLAGKRVVAIGRVTAEAL 538
Query: 206 PASYKNVVTVACFPKETSLLKL 227
+ L+ L
Sbjct: 539 RERGLVPDLIPEEDSAEGLISL 560
>gi|59800803|ref|YP_207515.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae FA 1090]
gi|194098093|ref|YP_002001141.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae NCCP11945]
gi|239998550|ref|ZP_04718474.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae 35/02]
gi|240013675|ref|ZP_04720588.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae DGI18]
gi|240016114|ref|ZP_04722654.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae FA6140]
gi|240112468|ref|ZP_04726958.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae MS11]
gi|240115208|ref|ZP_04729270.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae PID18]
gi|240117494|ref|ZP_04731556.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae PID1]
gi|240120744|ref|ZP_04733706.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae PID24-1]
gi|240125301|ref|ZP_04738187.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae SK-92-679]
gi|240127754|ref|ZP_04740415.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae SK-93-1035]
gi|254493271|ref|ZP_05106442.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae 1291]
gi|268598536|ref|ZP_06132703.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae MS11]
gi|268600888|ref|ZP_06135055.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae PID18]
gi|268603194|ref|ZP_06137361.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae PID1]
gi|268686145|ref|ZP_06153007.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae SK-93-1035]
gi|293399493|ref|ZP_06643646.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae F62]
gi|59717698|gb|AAW89103.1| putative uroporphyrinogen-III synthase [Neisseria gonorrhoeae FA
1090]
gi|193933383|gb|ACF29207.1| uroporphyrinogen-III synthetase [Neisseria gonorrhoeae NCCP11945]
gi|226512311|gb|EEH61656.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae 1291]
gi|268582667|gb|EEZ47343.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae MS11]
gi|268585019|gb|EEZ49695.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae PID18]
gi|268587325|gb|EEZ52001.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae PID1]
gi|268626429|gb|EEZ58829.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae SK-93-1035]
gi|291610062|gb|EFF39184.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae F62]
gi|317163825|gb|ADV07366.1| uroporphyrinogen-III synthase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 254
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D S+ + A+ S ++
Sbjct: 9 LIVRPSGRAKDDVEVCRRAGWQAEVLSPIEIETDEASLKRLPEMYARADAVFWVSPAAVE 68
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I A + S + +F +D + + A + +
Sbjct: 69 TAVPYLNLSDGIKAHIAVGQGSRRALARYAGAGVFAPEDGNDSEAVLRLPVWNSLPEGAR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ + G + L E V + Y+ + + +N A + V
Sbjct: 129 VLSVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F+ P S + IA A+ V P +
Sbjct: 187 QSLFAQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 233
>gi|225012580|ref|ZP_03703015.1| Uroporphyrinogen III synthase HEM4 [Flavobacteria bacterium
MS024-2A]
gi|225003113|gb|EEG41088.1| Uroporphyrinogen III synthase HEM4 [Flavobacteria bacterium
MS024-2A]
Length = 246
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 64/245 (26%), Gaps = 20/245 (8%)
Query: 1 MY---IVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAI 52
M I++++P + + + + K P + ++ I
Sbjct: 1 MKVKTILVSQPEPSSDKSPYSKLLDKHKLTLHFRPFIHVEGLDAKEVRQQKIDFNNFQNI 60
Query: 53 AITSSESLSTLPANFCRHTPI------FAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+TS ++ + + QK + +
Sbjct: 61 VLTSRNAVDHFFRLCKEMRFTVPDSTKYFCQSEAVAFYLQKYVVYRKRKIYVGEKKIEDL 120
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
F + ++ + D+L + + + Y + +
Sbjct: 121 EAVFKKFNK-ETFLFPTSDMLSQDVPDFLDKANLNWQRAILYRTVVSDLSD----LRDVY 175
Query: 167 ADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F++ S + F K + N+ A + + A P+ S+
Sbjct: 176 YDILVFFSPSGIESLFKNFPDFKQNDTRIAVYGNSTIEAAELANLRIDIKAPTPETPSMT 235
Query: 226 KLLPL 230
+
Sbjct: 236 MAIEK 240
>gi|91218003|ref|ZP_01254955.1| uroporphyrinogen-III synthetase [Psychroflexus torquis ATCC 700755]
gi|91183861|gb|EAS70252.1| uroporphyrinogen-III synthetase [Psychroflexus torquis ATCC 700755]
Length = 221
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 70/216 (32%), Gaps = 18/216 (8%)
Query: 18 KIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIG 77
+ G + A+ TS +++ + + +G
Sbjct: 22 LLINAGLSLIEYNAIQIEVLELPQERYKYHYPHAVV-TSQKAVELIKHFSIE--KCYCVG 78
Query: 78 EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIE 137
+ +A + GF + + E+ + + + G + R D E
Sbjct: 79 DKTALSLKNYGFLVEAKANNTKE-----LAEKILTNYHKNSFTFFGSQQRRPELSDMFRE 133
Query: 138 HKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCL 197
I L+ Y + I K ++ DA+L ++ S V F L A + + +C+
Sbjct: 134 SGIDLKEFFVYKTHLIP------KQFNRSFDAVLCFSPSGVDSLFKL--NASLDSNLICI 185
Query: 198 SNNIASAIPASYKNVVTVACFPKETSLL-KLLPLRR 232
N A+ V V+ SL+ K + L R
Sbjct: 186 GNTTATQAREH-SKRVYVSSKTSVESLIVKAVQLLR 220
>gi|114800364|ref|YP_761902.1| uroporphyrinogen-III synthase [Hyphomonas neptunium ATCC 15444]
gi|114740538|gb|ABI78663.1| uroporphyrinogen-III synthase [Hyphomonas neptunium ATCC 15444]
Length = 237
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 7/184 (3%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TR A T ++ +GY ++ P+ + A + I TS+ +
Sbjct: 5 VIVTRTQPGADETAARLTALGYHAILSPMLSI--LETGLAPAALEGVRDIIFTSANGVRA 62
Query: 63 LPANFCR--HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ + +G ++A AR+ GF Q+ G ++ +LA++I+ + + PL+
Sbjct: 63 FGSARLPASGFTAWCVGPSTATAAREAGFDQVVEGDGDASDLARLILTARAELS--GPLL 120
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARSSVL 179
++ H L + R Y + L +L ++
Sbjct: 121 HIANDAAAGHLVASLKAAGLDARFAAAYQTVAAPSLSAGALAALAEGPAILLIHSAKGAE 180
Query: 180 YFFS 183
Sbjct: 181 ALVQ 184
>gi|146298319|ref|YP_001192910.1| uroporphyrinogen III synthase HEM4 [Flavobacterium johnsoniae
UW101]
gi|146152737|gb|ABQ03591.1| uroporphyrinogen-III synthase [Flavobacterium johnsoniae UW101]
Length = 249
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 61/246 (24%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAI 52
M I++++P + E QK P + Y AI
Sbjct: 1 MKVKTILVSQPEPKVENSPYFELQQKHKIKIDFRPFIHVEGVSAKEIRLQKIDLNHYTAI 60
Query: 53 AITSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS ++ F EA A ++ + + + A +
Sbjct: 61 ILTSRNAVDHFFRVADEMRYKVPEGLKYFCQSEAVAFYLQKYVVYRKRKIYVGAKDFADL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + N L K+ Y + +
Sbjct: 121 --SPLIKKYKDEKFLLPASDQLNADAPITLNSLKVDWAQAIFYRTVMSDLSD----LADV 174
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D + F++ + + F K + + + +A P+ S+
Sbjct: 175 YYDVLAFFSPTGIKSLFKNFPDFKQNDTRIAVFGSTTQKEALDHGLRIDILAPTPETPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALEK 240
>gi|326802584|ref|YP_004320403.1| uroporphyrinogen III synthase HEM4 [Sphingobacterium sp. 21]
gi|326553348|gb|ADZ81733.1| Uroporphyrinogen III synthase HEM4 [Sphingobacterium sp. 21]
Length = 254
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 64/244 (26%), Gaps = 27/244 (11%)
Query: 3 IVIT--RPIKK-------ALRTQEKI-QKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAI 52
I++T RP A + K+ + +P F + A+
Sbjct: 13 ILVTLPRPENDKSPYFALASKYNLKLDFRAFIHVEGVPAREFRK-----ERINLADFTAV 67
Query: 53 AITSSESLSTLPANFCRHTPI------FAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
TS + + + L QK A+ +
Sbjct: 68 IFTSRNAADHFFRICEEMRYEVPADLKYFCLSETIALYLQKYIQYRKRKIFFGKQTAQDL 127
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
E + +Y N +++L E+ + + +
Sbjct: 128 EEVLKKHAK-EKFLYPCSDVANEETQNWLQENGYDFTPAVLFRTVVSDLSD----LANVF 182
Query: 167 ADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D I+F++ SS+ F K + + AI + A P+ S+
Sbjct: 183 YDIIVFFSPSSIQSLFENFPDFKQNDTRIAAFGPSTHQAIADRNLILDIAAPTPEAPSMT 242
Query: 226 KLLP 229
+
Sbjct: 243 MAVE 246
>gi|325124237|gb|ADY83760.1| uroporphyrinogen-III synthase [Acinetobacter calcoaceticus PHEA-2]
Length = 255
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/229 (15%), Positives = 71/229 (31%), Gaps = 23/229 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITS 56
M + TRP +A E +Q GY +PL + S AI + S
Sbjct: 1 MLFINTRPDSRAAELTEALQNEGYQVESLPLLELVAKPFSEHLLQLYQQLLKAQAIVVVS 60
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ ++ A+G+A+A + G + S + + +
Sbjct: 61 PTAVEVGMEYLVKSGLKISDLKNIQWIAVGQATANCLNEYGIEAHIPDVETSEGMLNLPI 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
+ + + G+ + L + I + Y+ Q +T K
Sbjct: 121 LHNMQ--QTGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYHRQCPEASYSTFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKISA--AFLCLSNNIASAIPAS 208
N N +L + +S Y+ L + +L L + +
Sbjct: 179 NYNLNKWLVLITSEASWKYWLELCSKNNVQPDGVYLVLGPRLFQIVKEY 227
>gi|225075721|ref|ZP_03718920.1| hypothetical protein NEIFLAOT_00737 [Neisseria flavescens
NRL30031/H210]
gi|224952992|gb|EEG34201.1| hypothetical protein NEIFLAOT_00737 [Neisseria flavescens
NRL30031/H210]
Length = 707
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/236 (12%), Positives = 64/236 (27%), Gaps = 16/236 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM--QQSYGAIAITSSESL 60
++I RP + + + G+ ++ DR ++ + + S ++
Sbjct: 4 LLIIRPSNRPQQDIQTCHAAGWQAQVLSPIEIEVDRSALKKLPEQFKQADVVFWVSPTTI 63
Query: 61 STLPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE-QKVLFTPQK 117
T + ++ + + + ++ P
Sbjct: 64 ETAVPYLTFSDGPEVHITVGQTSQHTLAQFSPYPVFSPKDGNDSEAVLRMSIWKNLPPNA 123
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + G D L E + + + Y+ + A K ++ A +
Sbjct: 124 RVLIIRGHGGRDFLADKLTELGFQIDIAEIYFRRPHAIDWQNFKT--EDIAAAYVTSGEL 181
Query: 178 VLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
FF P S + IA A+ V TSL L
Sbjct: 182 AREFFHQIPPQFSRFFESLLYFTHHPRIADALRIVGAKHVE-----TVTSLSAALS 232
>gi|99035973|ref|ZP_01315017.1| hypothetical protein Wendoof_01000153 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 201
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 66/194 (34%), Gaps = 11/194 (5%)
Query: 43 LAMQQSYGAIAITSSESLSTLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN 101
+ + TS S+ PI +G ++ A+ GF+ I N
Sbjct: 7 DISAHEFDVVISTSKNSVKAFSQICKVDDFPIITVGNSTMQAAKNLGFSDIISADSNVDG 66
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L I +Y+ G+ + + L E +R + Y + K
Sbjct: 67 LISFIKAHYSSAI---KFLYIRGQEVSCDLKKRLSEEDFNVREVVLYKTIIKRSLTNRCK 123
Query: 162 NLLQNADAIL--FYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVT 214
NLL + F++ + F SL L + + + +S NIA ++ +
Sbjct: 124 NLLLDGKIGSVAFFSSQTARVFCSLVLKSGLSHVMNNTVAYTMSKNIADSLKLIKWKKII 183
Query: 215 VACFPKETSLLKLL 228
+ P SL+ ++
Sbjct: 184 TSRLPTGESLIDII 197
>gi|255725594|ref|XP_002547726.1| hypothetical protein CTRG_02033 [Candida tropicalis MYA-3404]
gi|240135617|gb|EER35171.1| hypothetical protein CTRG_02033 [Candida tropicalis MYA-3404]
Length = 254
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 7/137 (5%)
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
N LA +I+++ + TP +I+ G+ R LI L+ Y +Q+
Sbjct: 117 NGSKLADLIIKEVDINTP---IIFFTGEIRKDIIPKKLINFGYNLKEFIIYKTQNREDIV 173
Query: 158 TTMKN-LLQNADAILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVV 213
L N I+F++ + + + +
Sbjct: 174 ENFNQVKLLNQGWIVFFSPQGTKEIVEHLRSCDDSNTNWKIASIGPTTEEYLLEYDIKPH 233
Query: 214 TVACFPKETSLLKLLPL 230
+A P+ SL + +
Sbjct: 234 VIATKPEPESLFQCIYK 250
>gi|170733764|ref|YP_001765711.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia cenocepacia MC0-3]
gi|169817006|gb|ACA91589.1| protein of unknown function DUF513 hemX [Burkholderia cenocepacia
MC0-3]
Length = 656
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/259 (12%), Positives = 63/259 (24%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSDALAAQLADAGCDVLEFPLIDIAPVDDPAPLDAAFAALADYALVIFVSPNA 70
Query: 60 LSTLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ A + P+ +G S + G H A V +
Sbjct: 71 IDRALARYDAIWPNALPVGVVGPGSVAALERHGIAAPAHRVIAPQAPADGGVPHYDSESL 130
Query: 116 Q---------------KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----P 156
K ++ + G + L E + ++ Y
Sbjct: 131 FASIEVAFGGAQALAGKRVLIVRGDGGREWLAERLREAGADVTLVAAYRRVVPEPRVGAW 190
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPAS 208
E L L + V L A A + I
Sbjct: 191 ERVHALLDGQPHGWLVTSSEGVRNLHELARAHLNDAEIDALKHAPLVTPHPRIEQTARTL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|34540058|ref|NP_904537.1| uroporphyrinogen-III synthase HemD [Porphyromonas gingivalis W83]
gi|188994174|ref|YP_001928426.1| putative uroporphyrinogen-III synthase [Porphyromonas gingivalis
ATCC 33277]
gi|34396369|gb|AAQ65436.1| uroporphyrinogen-III synthase HemD, putative [Porphyromonas
gingivalis W83]
gi|188593854|dbj|BAG32829.1| putative uroporphyrinogen-III synthase [Porphyromonas gingivalis
ATCC 33277]
Length = 248
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 61/240 (25%), Gaps = 16/240 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
I+I++P A R + QK G V P F + AI T+
Sbjct: 7 KILISQPQPVAGRSPYYDIAQKHGCEVVFRPFIQVESVSAREFRNQKVNILDHSAIIFTA 66
Query: 57 SESLSTLPANFC------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + T + S + QK +
Sbjct: 67 RTAIDHFFSLCEELRVTVPETMKYFCVSESVAVYLQKHIVYRKRKIFFGATGKLEDLLTV 126
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ ++ + D L K+ Y + + + D I
Sbjct: 127 ISKHNKETYFVPLAEEHKHDLLDMLTAKKVSFSPAIMYRTVSNDFGPDEALDH----DMI 182
Query: 171 LFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
LF++ S + + A A+ + + A + S+ L
Sbjct: 183 LFFSPSGITALLKNFPKFEQGKTKIGAFGPTTAKAVEEAGLRLDLSAPTEQYPSMAMALE 242
>gi|21226410|ref|NP_632332.1| uroporphyrinogen-III synthase [Methanosarcina mazei Go1]
gi|20904668|gb|AAM30004.1| Uroporphyrinogen-III synthase [Methanosarcina mazei Go1]
Length = 269
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 65/257 (25%), Gaps = 37/257 (14%)
Query: 5 ITRPI---KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS-----YGAIAITS 56
I RP +K+ + G+ P+ +P+ ++ F Q + TS
Sbjct: 17 IMRPESYREKSEAIA---RDYGFEPLCVPMIKLEGIKDDGFEPFIQRVIDGTSDYVVFTS 73
Query: 57 SESLSTLPANFC-----------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ ++ + + AIG + + G F D S +
Sbjct: 74 ANGITFTLDKLTEDEKKNFITALKKRKVIAIGPNTEKELVRIGIENSFMPADYSS---EG 130
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET---TMKN 162
IVE K + D L + + Y +
Sbjct: 131 IVEALCPEVKGKTVDLARSAYGAKLLIDGLEKCGATVYETHVYTLSIPEGAAQKELIERT 190
Query: 163 LLQNADAILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVV 213
L DA F + V F A + + + N
Sbjct: 191 LSGEVDAFAFTSSMMVRGFMKHAENLGASEAVKEILSRAVVGAIGTPTGNTLKKHGVNAN 250
Query: 214 TVACFPKETSLLKLLPL 230
+ +L+K +
Sbjct: 251 VIPDEFTFEALIKAMKK 267
>gi|311105077|ref|YP_003977930.1| uroporphyrinogen-III synthase [Achromobacter xylosoxidans A8]
gi|310759766|gb|ADP15215.1| uroporphyrinogen-III synthase [Achromobacter xylosoxidans A8]
Length = 272
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/254 (9%), Positives = 57/254 (22%), Gaps = 30/254 (11%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSESLST 62
++TRP + ++ G+ P ++P Y + S +
Sbjct: 15 ILTRPDGRNEALAGRLLGAGWTPCILPALEIQALPAMDGGPPRPSDYDMVVFVSGNAARL 74
Query: 63 LPANFCRHTPIFAIGEASACL---------------ARQKGFTQIFHGKDNSINLAKIIV 107
+ + S + +
Sbjct: 75 YLEQWAQADGPVPWPAEVIAATVGPASAQALRQSACFGANTTVLHPPENAPSHDSEALWQ 134
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ L + ++ + G D L H + Y + + + +L + A
Sbjct: 135 VLQGLPQRPRRVLLVRGTQGRDWLGDRLEAHGAAVTRHAAYLRRPANWGADQLASLRRWA 194
Query: 168 DA-----ILFYARSSVLYF-----FSLPLPAKISAAFLCLSN----NIASAIPASYKNVV 213
A L + + F+ + A +
Sbjct: 195 GAGIPATWLITSGEGADALRAGLDAAGLADWWARCRFVLTHPSLERRVPQACHEGGARPM 254
Query: 214 TVACFPKETSLLKL 227
C P + S+ +
Sbjct: 255 VKICLPNDESIFQA 268
>gi|86133880|ref|ZP_01052462.1| Porphobilinogen deaminase [Polaribacter sp. MED152]
gi|85820743|gb|EAQ41890.1| Porphobilinogen deaminase [Polaribacter sp. MED152]
Length = 530
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 62/211 (29%), Gaps = 22/211 (10%)
Query: 21 KMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST----LPANFCRHTPIFAI 76
+G F V ++ + ITS + + + I+ +
Sbjct: 330 AIGIEDSDFIKIRFNRISPKVMKNEIEN---VVITSQNGVEALLNSFTKDEMKFKNIYCV 386
Query: 77 GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLI 136
G + L + K+ AK++ E K + Y R YL
Sbjct: 387 GRRTKKLIENRIGKVTKAAKN-----AKVLAEYLSNELENKKVTYFCSDVRLDILPAYLQ 441
Query: 137 EHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLC 196
H I + ++ Y + + +LFY+ S + + + C
Sbjct: 442 SHYIVVNEVEAYKTMLSPEKLD------DSITGVLFYSPSGIESYLT---KNSADKIAFC 492
Query: 197 LSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ A V VA P S+L+L
Sbjct: 493 IGETTAKEARKH-FENVQVANLPSVDSVLEL 522
>gi|260172702|ref|ZP_05759114.1| uroporphyrinogen-III synthase [Bacteroides sp. D2]
Length = 241
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/220 (10%), Positives = 57/220 (25%), Gaps = 16/220 (7%)
Query: 20 QKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITSSESLSTLPA-------NFCR 69
+K G P F + A+ TS ++
Sbjct: 18 EKYGVKIDFRPFIKVESLSAKEFRQQKISILDHTAVIFTSRHAIDHFFTLCTELRVTIPE 77
Query: 70 HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNF 129
F + EA A ++ + + + ++ V + + N
Sbjct: 78 TMKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLIPSIVK-HKTEKYLVPMSDVHND 136
Query: 130 HFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAK 189
++ L ++ I Y + + + D ++F++ + V
Sbjct: 137 DVKNLLDKNNIQHTEAVMYRTVSNDFTPDE----EFDYDMLVFFSPAGVTSLKKNFPDFN 192
Query: 190 IS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ A A+ + + A + S+ L
Sbjct: 193 QKEIKIGTFGSTTAQAVRDAGLRLDLEAPTVQAPSMTAAL 232
>gi|325272337|ref|ZP_08138740.1| uroporphyrinogen-III synthase [Pseudomonas sp. TJI-51]
gi|324102531|gb|EGB99974.1| uroporphyrinogen-III synthase [Pseudomonas sp. TJI-51]
Length = 255
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/216 (13%), Positives = 68/216 (31%), Gaps = 16/216 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSS 57
+++TRP + + + G +PL + + L + AI + S
Sbjct: 5 RLLLTRPAEDCAALAQSLAAAGVASHCLPLLEIEPVQIQAGQRALLQGLGGFQAIIVVSK 64
Query: 58 ESLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ L F +GEA+A + +Q G + + L + ++
Sbjct: 65 PAARLLLEQLANASLQPPVQGWFTVGEATAAVLQQAGLRVNCPPRGDDSEALLMLPALRQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNAD 168
+ P ++ + G + L E + ++ Y YP T+ + + +
Sbjct: 125 AVAVPAARVLIVRGVGGRELLAERLAEQGASVDYLELYRRCLPVYPAGTLMRRIEAERLN 184
Query: 169 AILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNI 201
++ + + + L S +
Sbjct: 185 GLVVSSGQGLEHLQQLAGADWPQLARLPLFVPSPRV 220
>gi|73662404|ref|YP_301185.1| uroporphyrinogen III synthase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494919|dbj|BAE18240.1| uroporphyrinogen III synthase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 228
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 65/204 (31%), Gaps = 11/204 (5%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACL 83
+ P ++ L +Y + +S +++ + + I IGE +A
Sbjct: 20 ILHKPFINVEPLSFNLNLLDV-NYDWLIFSSKKAVEYFKPYLSKLNYKKIAVIGEKTADY 78
Query: 84 ARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLR 143
G F KD S + ++ E+ L + ++
Sbjct: 79 CTSIGLKVSFCPKDYSQEGFLKAFKTHEQS----NILLPSSAAARSTLEEGLKQQNYNVQ 134
Query: 144 VIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNI 201
ID Y +K L++ DAI F + S+V YFF + + +
Sbjct: 135 KIDLYEPVPHTKHIKHVKMLIEQGKVDAITFASSSAVRYFFEDNQNVSFN-NYFVIGQQT 193
Query: 202 ASAIPASYKNVVTVACFPKETSLL 225
+ Y+ VA +L+
Sbjct: 194 LDTL-NHYQKQGIVADIQTLDALV 216
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYK 210
++ + L N D ++F ++ +V YF + A +
Sbjct: 26 INVEPLSFNLNLLDVNYDWLIFSSKKAVEYFKPYLSKLNYK-KIAVIGEKTADYCTSIGL 84
Query: 211 NVVTVACFPKETSLLKL 227
V + LK
Sbjct: 85 KVSFCPKDYSQEGFLKA 101
>gi|126662986|ref|ZP_01733984.1| uroporphyrinogen-III synthase [Flavobacteria bacterium BAL38]
gi|126624644|gb|EAZ95334.1| uroporphyrinogen-III synthase [Flavobacteria bacterium BAL38]
Length = 261
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 57/242 (23%), Gaps = 21/242 (8%)
Query: 3 IVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I++++P K Q K++ P + +Y AI +
Sbjct: 18 ILVSQPEPKVENSPYFELQNKLK---VKVDFRPFIHVEGVPAKEIRAQKIDLNNYTAIIL 74
Query: 55 TSSESLSTLP---ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
TS S+ P + + + K K V+
Sbjct: 75 TSRNSVDHFFRVAEEMRYKIPEDLKYFCQSEAVAFYLQRYVVYRKRKIYVGQKDFVDMSP 134
Query: 112 LFTPQK--PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
L K + N L K+ Y + + D
Sbjct: 135 LIKKYKDEKFLLPSSDQLNADIPQTLDGLKVNWVPGTFYKTVMSDLTD----LKDVYYDV 190
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F++ + + F K + V +A P S+ L
Sbjct: 191 LAFFSPTGIKSLFKNFPDFKQNDTRIAVFGTTTHKEALDRGLRVDIMAPSPGTPSMTGAL 250
Query: 229 PL 230
Sbjct: 251 EK 252
>gi|297620494|ref|YP_003708631.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia
chondrophila WSU 86-1044]
gi|297375795|gb|ADI37625.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia
chondrophila WSU 86-1044]
Length = 472
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/181 (10%), Positives = 39/181 (21%), Gaps = 9/181 (4%)
Query: 28 MMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRH--TPIFAIGEASACLAR 85
P+ + S + I TS ++ F I +
Sbjct: 293 HCPIIEIVPKIRSTRPLP--PFTHIVFTSKSAVKIFCCYFDPKGLMDKTVIAVGTQTAQG 350
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ +I + L + + DYL +IP
Sbjct: 351 LIDCGVDVDYMPEVESSEGLIALLETLNLQDAQIFWPHSALSRPVITDYLTNKQIPFTEW 410
Query: 146 DCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAI 205
Y + + ++F + S+V F + +
Sbjct: 411 VIYTTIPREPTPLP-----EEFHELVFTSPSTVDAFLLFFDEFPPDVKLTAIGPVTEQYL 465
Query: 206 P 206
Sbjct: 466 E 466
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPK 220
L I+F ++S+V F P + + + A + +V +
Sbjct: 307 RPLPPFTHIVFTSKSAVKIFCCYFDPKGLMDKTVIAVGTQTAQGLIDCGVDVDYMPEVES 366
Query: 221 ETSLLKLLP 229
L+ LL
Sbjct: 367 SEGLIALLE 375
>gi|262373964|ref|ZP_06067241.1| uroporphyrinogen-III synthase [Acinetobacter junii SH205]
gi|262310975|gb|EEY92062.1| uroporphyrinogen-III synthase [Acinetobacter junii SH205]
Length = 258
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 76/225 (33%), Gaps = 22/225 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITS 56
M + TRP +A + + + G +PL + + + L ++ I + S
Sbjct: 1 MLFINTRPEDRAHSLNQALIQEGIQVESLPLLELVAEPFTADLMQLYDQLKASQVIVVVS 60
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ +H A+G+A+A + G + ++S + ++ +
Sbjct: 61 PTAVEIGMLYLKNSGIDLDQLKHIQWIAVGQATAAALKTFGIDSLVPDVESSEGMLQLPI 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM-----KN 162
++ + + + G +L + + + Y Q T +
Sbjct: 121 LRERVDLN--TVAFWRGHGGRQFMMQHLQQTGVNILNFILYRRQCPELSLTKFPKLVSQL 178
Query: 163 LLQNADAILFYARSSVLYFFSLPLP--AKISAAFLCLSNNIASAI 205
+ Q +L + +S + L ++ +L L +A +
Sbjct: 179 VAQQPVFVLISSEASWRNWQKLTAQISKELDCIYLVLGERLAQVL 223
Score = 35.9 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 38/123 (30%), Gaps = 10/123 (8%)
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET--TMKNLLQNADAILFYARS 176
I + R LI+ I + + + + + L+ + I+ + +
Sbjct: 3 FINTRPEDRAHSLNQALIQEGIQVESLPLLELVAEPFTADLMQLYDQLKASQVIVVVSPT 62
Query: 177 SVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL-LP 229
+V + I ++ + A+A+ + V +L+L +
Sbjct: 63 AVEIGMLYLKNSGIDLDQLKHIQWIAVGQATAAALKTFGIDS-LVPDVESSEGMLQLPIL 121
Query: 230 LRR 232
R
Sbjct: 122 RER 124
>gi|157828591|ref|YP_001494833.1| hypothetical protein A1G_04055 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933305|ref|YP_001650094.1| uroporphyrinogen-III synthase [Rickettsia rickettsii str. Iowa]
gi|157801072|gb|ABV76325.1| hypothetical protein A1G_04055 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908392|gb|ABY72688.1| uroporphyrinogen-III synthase [Rickettsia rickettsii str. Iowa]
Length = 224
Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 79/237 (33%), Gaps = 27/237 (11%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYI--PVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ T ++I K + PL + ++ + +Y I ITS
Sbjct: 1 MKSVLLTRHIEENNETIKEISKYNLDLRDIHCPLIKYKTLDFNIAI--LDNYSNIIITSK 58
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ S L + + ++ L ++ + + +++ ++
Sbjct: 59 YAASILTGHNLKQDIWVVGSKSKRLLGKK---------VMYTAKNVEDLIKHFPPDLYEQ 109
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + + + P + +K N D IL Y+++S
Sbjct: 110 TIYLSSNEITKDLPSKIARHIIYNVEYL-------NELPVSIIKAFKNNIDFILLYSQNS 162
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L L + + + +S +A+ + + V ++KLL
Sbjct: 163 ARTLVKLLLQNNLLEYLQDSLVVAISLKVANIVR-PFIKNVVYCDDQNLNDIIKLLS 218
>gi|332519549|ref|ZP_08396016.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4]
gi|332045397|gb|EGI81590.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4]
Length = 527
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 63/199 (31%), Gaps = 16/199 (8%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTL---PANFCRHTPIFAIGEASACLARQKG 88
+R + L + ITS ++ L + +
Sbjct: 336 IKISLNRIAPRLLK-NEIENVVITSKNAVEALLTNFSAIELQFKNIYCVGRRTKRLVENR 394
Query: 89 FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCY 148
++ H + N+ LA+ +VE + Y R L E+ I ++ I+ Y
Sbjct: 395 IGKVKHSEKNAKKLAEHLVEYMDGNQ----VTYFCSDLRLDDLPTILEENNINVKQIEAY 450
Query: 149 YSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
++ + ++FY+ S+V F C+ A
Sbjct: 451 QTKFDSLEIPNTVE------GVMFYSPSTVKSFKQENTVTNT-MIAFCIGETTAKEAR-H 502
Query: 209 YKNVVTVACFPKETSLLKL 227
Y N V VA P S+++L
Sbjct: 503 YFNDVRVAKVPTVESVIEL 521
>gi|15892639|ref|NP_360353.1| hypothetical protein RC0716 [Rickettsia conorii str. Malish 7]
gi|15619808|gb|AAL03254.1| unknown [Rickettsia conorii str. Malish 7]
Length = 234
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 79/237 (33%), Gaps = 27/237 (11%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYI--PVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ T ++I K + PL + ++ + +Y I ITS
Sbjct: 11 MKSVLLTRHIEENNETIKEISKYNLDLRDIHCPLIKYKTLDFNIDI--LDNYSNIIITSK 68
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ S L + + ++ L ++ + + +++ ++
Sbjct: 69 YAASILTGHNLKQDIWVVGSKSKRLLGKK---------VMYTAKNVEDLIKHFPPDLYEQ 119
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + + + P + +K N D IL Y+++S
Sbjct: 120 TIYLSSNEITQDLPSKIARHIIYNVEYL-------NELPVSIIKEFNNNIDFILLYSQNS 172
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L L + + + +S +A+ + + V ++KLL
Sbjct: 173 ARTLVKLLLQNNLLEYLQDSLVVAISLKVANIVR-PFIKNVVYCDDQNLNDIIKLLS 228
>gi|86739506|ref|YP_479906.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Frankia sp. CcI3]
gi|86566368|gb|ABD10177.1| Uroporphyrinogen III synthase HEM4 [Frankia sp. CcI3]
Length = 383
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/256 (10%), Positives = 61/256 (23%), Gaps = 39/256 (15%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPAN 66
+++ G V P + + L + A+ T++
Sbjct: 34 DELANLLERRGARVVHAPALRIVPLADDSLLLAATRECLTRPLDAVIATTAIGFRGWVEA 93
Query: 67 FCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+F G R G T+ + + S + A+++
Sbjct: 94 AEGWGLGERLRDRLDGARLFTRGPKVTGAVRAAGLTECWSPR--SESGAELVAHLLTENL 151
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAI 170
+ + L + I Y + + + A+
Sbjct: 152 AGLRIAVQLHGEPLPDMVEGLRAAGAEVVEIPVYRWEPPDDLRPVRRMVELIVTGGVSAV 211
Query: 171 LFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVVTVACFPK 220
F + +V+ + C+ A+ + V +
Sbjct: 212 TFTSAPAVVSLLRIAREMGQFDELLTALRGEVLPACVGPVCAAPLERQGVATV-TPDRFR 270
Query: 221 ETSLLKLLP----LRR 232
+L++ L RR
Sbjct: 271 LGALVRTLSDELPRRR 286
>gi|282880556|ref|ZP_06289263.1| uroporphyrinogen-III synthase [Prevotella timonensis CRIS 5C-B1]
gi|281305659|gb|EFA97712.1| uroporphyrinogen-III synthase [Prevotella timonensis CRIS 5C-B1]
Length = 248
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 63/243 (25%), Gaps = 20/243 (8%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I++++P + E ++ P F Y AI
Sbjct: 3 KILVSQPKPTTEKSPYYDIE--REYDVKCDFRPFFKVEGLSAKEFRHQKINILDYSAIVF 60
Query: 55 TSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS +++ F + E+ A ++ + + +V
Sbjct: 61 TSRHAVNHFFTLAKELRVTIPEDMKYFCVIESIALYIQKYVQYRKRKVFFGTTGKIADLV 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + N ++ L K+ Y + E +K +
Sbjct: 121 PIMAKHKA-EKYLVPMSSVHNDDVKNMLDAKKLKHTECVMYRTVSNDLTEEEVKAF--DY 177
Query: 168 DAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D I+F++ + + + A+ + + A + S+
Sbjct: 178 DMIIFFSPTGINALQKNLPNFEQGDIKMAAFGPATCKAVTDAGFRLDLKAPDAENPSMTS 237
Query: 227 LLP 229
L
Sbjct: 238 ALK 240
>gi|221199354|ref|ZP_03572398.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia multivorans CGD2M]
gi|221205744|ref|ZP_03578759.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia multivorans CGD2]
gi|221174582|gb|EEE07014.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia multivorans CGD2]
gi|221180639|gb|EEE13042.1| uroporphyrinogen-III synthase HemD/uroporphyrinogen III methylase
HemX [Burkholderia multivorans CGD2M]
Length = 656
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 63/259 (24%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSAGLAAQLAGAGCDVLEFPLIDIAPVDDPAPLAAAFAALADYALVIFVSPNA 70
Query: 60 LSTLPANFCRHTPI-----------------FAIGEASACLARQKGFTQIFHGKDNSINL 102
+ A + P I + + + + +S L
Sbjct: 71 IDRALAQYGAIWPNALPVGVVGPGSVAALERHGIAPPAYRVIAPQPGSDGSAPHYDSEGL 130
Query: 103 AKIIVEQK--VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
I K ++ + G D L E + ++ Y T
Sbjct: 131 FASIEAAFGGASALAGKRVLIVRGDGGREWLADRLREAGADVTLVAAYRRVVPEPRIGTW 190
Query: 161 KNLLQ----NADAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPAS 208
+ + A L + V L + I A
Sbjct: 191 ERVHALLGGEPHAWLVTSSEGVRNLHELARAHLNDTEIEALKHAPLVTPHPRIEQTARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|258651771|ref|YP_003200927.1| uroporphyrinogen III synthase HEM4 [Nakamurella multipartita DSM
44233]
gi|258554996|gb|ACV77938.1| Uroporphyrinogen III synthase HEM4 [Nakamurella multipartita DSM
44233]
Length = 263
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 56/196 (28%), Gaps = 18/196 (9%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+++ RP +++ + + G P ++ L ++ L + +A T
Sbjct: 15 RVLVPRPAERSADLVQALTAAGARPEVVELIGIAEPADTAALDLAVLGLSRGEDAWVAFT 74
Query: 56 SSESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S ++ + T + A+G A+A R G A
Sbjct: 75 SVNAVDAVVGRARALTVDPVIAADTRVAAVGPATARALRAAGLPVDLQPAARGSAAAL-- 132
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN-LLQ 165
+ ++ L +R + Y + +
Sbjct: 133 AAVFPQAAGDQSVLLPRSDLAPDTLPAALAGKGFQVRPVIAYRTVVRPPEPEIARRLAAG 192
Query: 166 NADAILFYARSSVLYF 181
+ A+LF + S+V
Sbjct: 193 DFHAVLFTSPSTVQAL 208
>gi|239502039|ref|ZP_04661349.1| uroporphyrinogen-III synthase [Acinetobacter baumannii AB900]
Length = 255
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 23/221 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITS 56
M + TRP +A +Q G+ +PL + S L AI + S
Sbjct: 1 MLFINTRPDSRAAELTHALQNKGFQVESLPLLELVAQPFSESLFQLYQQLTGAQAIVVVS 60
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ +H A+G+A+A G + S + + +
Sbjct: 61 PTAVDVGMQYLAQSGLKIDELKHIQWIAVGQATANRLHDYGIEAHVPEVETSEGMLNLPL 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
++ + + G+ + L + I + Y Q +T K
Sbjct: 121 LHRMQ--KSGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYRRQCPQASYSTFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLP--LPAKISAAFLCLSNN 200
N + +L + +S Y+ L A+ +L L
Sbjct: 179 NYNLDKWLVLITSEASWKYWLELCLKNKAQPDCVYLVLGPR 219
>gi|83953032|ref|ZP_00961754.1| uroporphyrinogen-III synthase, putative [Sulfitobacter sp.
NAS-14.1]
gi|83842000|gb|EAP81168.1| uroporphyrinogen-III synthase, putative [Sulfitobacter sp.
NAS-14.1]
Length = 246
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 63/200 (31%), Gaps = 11/200 (5%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLA 84
V PL + + V L G + TS+ ++ P A A A
Sbjct: 44 RVVTSPLLHILPTAAPVDL---GGIGGVIFTSANGVAHGPEGGTVPAYCVGEATAQAAAA 100
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+ A ++ P PL++L G + + L + +P R
Sbjct: 101 KGWQVAFH-------APDAAHLLPMIKAHRPATPLLHLRGTHQRGDIAERLTQAGLPTRA 153
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y Q + L + ++ + F + + + LS +A A
Sbjct: 154 VVLYDQQALPLTRDAQAALSDGPSIVPLFSPRTAAQFADQAHDTRRAT-IIALSPAVAEA 212
Query: 205 IPASYKNVVTVACFPKETSL 224
+ + + +A P TSL
Sbjct: 213 LDRTVVQQMLIAPEPTATSL 232
>gi|34581595|ref|ZP_00143075.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262980|gb|EAA26484.1| unknown [Rickettsia sibirica 246]
Length = 224
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 79/237 (33%), Gaps = 27/237 (11%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYI--PVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ T ++I K + PL + ++ + +Y I ITS
Sbjct: 1 MKSVLLTRHIEENNETIKEISKYNLDLRDIHCPLIKYKTLDFNIDI--LDNYSNIIITSK 58
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ S L + + ++ L ++ + + +++ ++
Sbjct: 59 YAASILTGHNLKQDIWVVGSKSKRLLGKK---------VMYTAKNVEDLIKHFPPDLYEQ 109
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + + + P + +K N D IL Y+++S
Sbjct: 110 TIYLSSNEITQDLPSKIARHIIYNVEYL-------NELPVSIIKEFTNNIDFILLYSQNS 162
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L L + + + +S +A+ + + V ++KLL
Sbjct: 163 ARTLVKLLLQNNLLEYLQDSLVVAISLKVANIVR-PFIKNVVYCDAQNLNDIIKLLS 218
>gi|327403339|ref|YP_004344177.1| uroporphyrinogen-III synthase [Fluviicola taffensis DSM 16823]
gi|327318847|gb|AEA43339.1| uroporphyrinogen-III synthase [Fluviicola taffensis DSM 16823]
Length = 249
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 60/241 (24%), Gaps = 21/241 (8%)
Query: 3 IVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I++++P + EK P + F + + A+ +
Sbjct: 6 ILVSQPKPEGEKSPYFDLAEK---YKLKIDFRPFIHVEGVSVQEFRTHKIDLKEHTAVIL 62
Query: 55 TSSESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
TS ++ P + + + K + I E
Sbjct: 63 TSKTAVDHFFRISEETRFEVPDTMKYFCISEAVALYLQKYVTYRKRKIFFGKQTIEELVD 122
Query: 112 LFTPQK--PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
K + L + KIP Y + + D
Sbjct: 123 PIKKHKGEKFLLPCTDILQDKIPLTLEDAKIPFTKAMLYRTVASDLSD----LEDVYYDM 178
Query: 170 ILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + F K + A+A+ + + A P S+ +
Sbjct: 179 LVFFSPGGIESLFKNFPDFKQNKTLIAAFGPTTANAVVKNNLRLDVHAPMPNAPSMTAAI 238
Query: 229 P 229
Sbjct: 239 E 239
>gi|227876592|ref|ZP_03994702.1| uroporphyrinogen-III synthase, HemD [Mobiluncus mulieris ATCC
35243]
gi|269977781|ref|ZP_06184741.1| uroporphyrinogen-III synthase [Mobiluncus mulieris 28-1]
gi|306817545|ref|ZP_07451288.1| uroporphyrinogen-III synthase [Mobiluncus mulieris ATCC 35239]
gi|307699783|ref|ZP_07636834.1| uroporphyrinogen-III synthase [Mobiluncus mulieris FB024-16]
gi|227842793|gb|EEJ52992.1| uroporphyrinogen-III synthase, HemD [Mobiluncus mulieris ATCC
35243]
gi|269934085|gb|EEZ90659.1| uroporphyrinogen-III synthase [Mobiluncus mulieris 28-1]
gi|304649587|gb|EFM46869.1| uroporphyrinogen-III synthase [Mobiluncus mulieris ATCC 35239]
gi|307614821|gb|EFN94039.1| uroporphyrinogen-III synthase [Mobiluncus mulieris FB024-16]
Length = 249
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 67/241 (27%), Gaps = 22/241 (9%)
Query: 2 YIVITR-PIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-----ESVFLAMQQSYGAIAIT 55
+++ R P +++ + G P++ + + + Q Y + ++
Sbjct: 4 KLLVPRVPQD---ILAKELAEAGLPVACAPVTKKVPTASEDWFDPMQRLQQGEYDWVVLS 60
Query: 56 SSESLSTLPAN-----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S + L + + A+G A+A R G F G D + A+ +VE
Sbjct: 61 SVATAKFLDEHYELGELLAQVQVAAVGSATADAIRAYGGRVDFVGPDPAS--AETLVEAF 118
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NAD 168
+ ++ + L + + Y S + T L
Sbjct: 119 P--SGSGNVLLPCAVGAAPTLAEGLNRKGYDVERLRLYESVALDELPLTWGEALALGEPT 176
Query: 169 AILFYARSSVLYFFSLPLPAKISAAF--LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
L A S A + + + A + V +L
Sbjct: 177 VALITAGSVAQAAHRQLSKAGVKLWPVPMAFGKSSAKVLRELGWPAGAVCPTTNTEGVLA 236
Query: 227 L 227
Sbjct: 237 A 237
>gi|305665660|ref|YP_003861947.1| porphobilinogen deaminase [Maribacter sp. HTCC2170]
gi|88710417|gb|EAR02649.1| porphobilinogen deaminase [Maribacter sp. HTCC2170]
Length = 529
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 64/199 (32%), Gaps = 18/199 (9%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRH---TPIFAIGEASACLARQKG 88
R + + + +TS ++ L N + +
Sbjct: 336 IKTSPTRIPLKELKTE-IQNVVLTSKNAVEALLTNISANELKFKNIYCVGRKTKRLVENR 394
Query: 89 FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCY 148
++ H + N+ LA+ +VE + Y R F + ++ I + I+ Y
Sbjct: 395 IGKVTHFERNAKKLAEHLVEFMD----GTEVTYFCSNIRLDDFPKIMKDNNIVVHEIETY 450
Query: 149 YSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
++ + + + +LF++ S V + K + C+ A A
Sbjct: 451 RTKLTP------IEIEDSVEGVLFFSPSGVESYL---QKNKANKIAYCIGETTAKAARVH 501
Query: 209 YKNVVTVACFPKETSLLKL 227
V VA P + ++ L
Sbjct: 502 -FQEVKVAKIPDVSGVIDL 519
>gi|302524410|ref|ZP_07276752.1| uroporphyrinogen-III synthase [Streptomyces sp. AA4]
gi|302433305|gb|EFL05121.1| uroporphyrinogen-III synthase [Streptomyces sp. AA4]
Length = 313
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 58/242 (23%), Gaps = 36/242 (14%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---------------- 45
I +T ++A + + G P + + L
Sbjct: 53 RIGVT-AERRADDLIGALLRHGAEVRHAPTITIVPLADDPELRRGTEAVLAAPVGLTAVT 111
Query: 46 --QQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
G + L + + IFA G + R G + + + +
Sbjct: 112 TGAGFRGWLDAAEGWGLRAALLDALSGSRIFARGPKAVGAVRGVGLREEYSAPGETND-- 169
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ + F D L + + Y PE +
Sbjct: 170 ELFGALTEAGVDGARVAVQLHGAPLPEFTDPLAAAGASVLAVQPYRWHTPPDPEPVFSLI 229
Query: 164 LQ----NADAILFYARSSVLYFFSLPLPAKIS-----------AAFLCLSNNIASAIPAS 208
+ A++F + + F +L + C+ A + A+
Sbjct: 230 REVLSGELAALVFTSAPAATNFLALADESGRGAELREILRGGTVVCACVGPVTAVPLEAA 289
Query: 209 YK 210
Sbjct: 290 GI 291
>gi|206560968|ref|YP_002231733.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia cenocepacia J2315]
gi|198037010|emb|CAR52931.1| putative bifunctional protein (uroporphyrin-III C-methyltransferase
and uroporphyrinogen-III synthase transmembrane protein)
[Burkholderia cenocepacia J2315]
Length = 656
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 66/259 (25%), Gaps = 36/259 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSDALAAQLADAGCDVLEFPLIDIAPVDDPAPLDAAFAALADYALVIFVSPNA 70
Query: 60 LSTLPANFCRHT----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ A + P+ +G S + G H A V +
Sbjct: 71 IDRALARYGAIWPNALPVGVVGPGSVAALERHGIAAPAHRVIAPQAPADGGVPHYDSESL 130
Query: 116 Q---------------KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----P 156
K ++ + G + L E + ++ Y
Sbjct: 131 FASIEAAFGGAPALAGKRVLIVRGDGGREWLAERLREAGADVTLVAAYRRVVPEPRVGAW 190
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPAS 208
E L A L + V L A A + I + A
Sbjct: 191 ERVHALLDGQPHAWLVTSSEGVRNLHELARAHLNDAEIDALKHAPLVTPHPRIEQSARAL 250
Query: 209 YKNVVTVACFPKETSLLKL 227
+ +T+ + +++
Sbjct: 251 GFDRITLT-GAGDERIVRA 268
>gi|16081676|ref|NP_394047.1| uroporphyrinogen-III synthase [Thermoplasma acidophilum DSM 1728]
gi|10639741|emb|CAC11713.1| hypothetical protein [Thermoplasma acidophilum]
Length = 225
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 72/233 (30%), Gaps = 16/233 (6%)
Query: 1 MYIVIT--RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
M I + RP +KA RT + + +P++ ++ +A TSS
Sbjct: 1 MKIFVLSIRPEEKAQRTGGAC----FDILNVPVTRLEPIPVDYTDLIRSGVDCVAFTSSY 56
Query: 59 SLS-TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ ++ F IG+++ R+ G+ + K +S LA +I+ +
Sbjct: 57 GVRLFFKNAPVKNFRYFGIGKSTCEEVRKYGYDCEYPEKMDSEGLADMIISHCS----GR 112
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + N + ++ H + + + M + I+ +
Sbjct: 113 KVALIRSANANEIVNEKIMGHVDFIDLRNYRAVNTNVDLTPYMAK--EECMGIIVTSSME 170
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ + + + + ++ L++ +
Sbjct: 171 AKIAMPAIKATGK--PVYSIGSVTTKTLEEAGIHP-AISGNSDFVDLVEKIKK 220
>gi|229586822|ref|YP_002845323.1| hypothetical protein RAF_ORF0690 [Rickettsia africae ESF-5]
gi|228021872|gb|ACP53580.1| Unknown [Rickettsia africae ESF-5]
Length = 234
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 79/237 (33%), Gaps = 27/237 (11%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYI--PVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ T ++I K + PL + ++ + +Y I ITS
Sbjct: 11 MKSVLLTRHIEENNETIKEISKYNLDLRDIHCPLIKYKTLDFNIDI--LDNYSNIIITSK 68
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ S L + + ++ L ++ + + +++ ++
Sbjct: 69 YAASILTGHNLKQDIWVVGSKSKRLLGKK---------VMYTAKNVEDLIKHFPPDLYEQ 119
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + + + P + +K N D IL Y+++S
Sbjct: 120 TIYLSSNEITQDLPSKIARHIIYNVEYL-------NELPVSIIKEFTNNIDFILLYSQNS 172
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L L + + + +S +A+ + + V ++KLL
Sbjct: 173 ARTLVKLLLQNNLLEYLQDSLVVAISLKVANIVR-PFIKNVVYCDDQNLNDIIKLLS 228
>gi|260061129|ref|YP_003194209.1| uroporphyrinogen-III synthase [Robiginitalea biformata HTCC2501]
gi|88785261|gb|EAR16430.1| uroporphyrinogen-III synthase [Robiginitalea biformata HTCC2501]
Length = 223
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 66/200 (33%), Gaps = 20/200 (10%)
Query: 31 LSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPAN---FCRHTPIFAIGEASACLARQK 87
+ ++ + + TS+ ++ R +G +A +
Sbjct: 30 ALEVTYLEANLHSDDEALF---IFTSTHAIEACFPEGRLPDRMLNCCCVGRKTAARLEKM 86
Query: 88 GFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDC 147
G + + A+++ E+ + + IY R D L+E + L
Sbjct: 87 GHRILAV-----EDRAELLAERIINKYSSRSFIYFCSSRRLDTLPDRLLEAGVRLEERVV 141
Query: 148 YYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPA 207
Y + + L + DAILF++ S V F L A +C+ A A+
Sbjct: 142 YQTGFNQ------RILDKQFDAILFFSPSGVESF--LGSNQLHDATAICIGPTTAQAVKK 193
Query: 208 SYKNVVTVACFPKETSLLKL 227
+ A P ++L+
Sbjct: 194 H-TDKFISAESPSAEAVLQA 212
>gi|325268531|ref|ZP_08135161.1| uroporphyrinogen-III synthase [Prevotella multiformis DSM 16608]
gi|324989059|gb|EGC21012.1| uroporphyrinogen-III synthase [Prevotella multiformis DSM 16608]
Length = 251
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 62/240 (25%), Gaps = 16/240 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
I++++P + + + +G V P F Y A+ TS
Sbjct: 4 KILVSQPKPSSDKSPYYDIATDLGVELVFRPFFKVEGLSAKEFRQQKVNLLDYTAVVFTS 63
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + E A ++ + + ++
Sbjct: 64 RHAVDNYFNLAKEMRITIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGNTGKIDSLIPT 123
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + L ++ + Y + E +KN + D
Sbjct: 124 M-QKHKVEKYLVPQSSVHTDALSKLLDASRLKHKECVMYRTVSNGLTEEEVKNF--DYDM 180
Query: 170 ILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V K A + A + A + S+ L
Sbjct: 181 LIFFSPTGVKALKENIPDFKQGDIKIAAFGPATAKEVEAQGLKLDLQAPSKEYPSMTGAL 240
>gi|325105236|ref|YP_004274890.1| uroporphyrinogen-III synthase [Pedobacter saltans DSM 12145]
gi|324974084|gb|ADY53068.1| uroporphyrinogen-III synthase [Pedobacter saltans DSM 12145]
Length = 255
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 63/243 (25%), Gaps = 25/243 (10%)
Query: 3 IVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAI 54
I++T P ++ M + + A+ +
Sbjct: 15 ILVTLPEPESKKSPYYDLAA---SMNLKIDFRSFIHVEGVPAKDVRKDKINLPDFTAVIL 71
Query: 55 TSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS + F I E+ A ++ + +
Sbjct: 72 TSKNAADHFFRVCEEMRYEVPADMKYFCISESIALYLQKYIQYRKRKIFFGKQTAKDL-- 129
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + +Y E +L I + + + + ++ +
Sbjct: 130 ADVLKKHSGEKFLYPCSDVAAEATEVFLRNQGIDFTPAVLFRTVVSDLSD--LADVFYD- 186
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
I+F++ SSV F+ K + N AI + + A P+ S+
Sbjct: 187 -IIVFFSPSSVQSLFTNFPDFKQNKTRIAAFGNTTRQAILDAGLILDIPAPTPEAPSMTM 245
Query: 227 LLP 229
+
Sbjct: 246 AIE 248
>gi|313817464|gb|EFS55178.1| uroporphyrinogen-III synthase [Propionibacterium acnes HL046PA2]
Length = 181
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 5/181 (2%)
Query: 50 GAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ +TS ++ L + I +A A + + + A ++ E
Sbjct: 1 DWLVVTSKTTV-GLLPTPLPNPNIKVAAVGAATSAALRTRGIDVDFVPENHSGAGLVAEW 59
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
++ + L + + ++ Y + + + +
Sbjct: 60 P---GGVASILLPASQLTADTVPLGLTKVGCTVNRLEIYTTAAVEKLPEVIAQSWPSVGV 116
Query: 170 ILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ A S L P + L A + VA P ++L+ +
Sbjct: 117 VVVTASSVGRALVELVEPLGWRRQKLVALGKPTARTLEVLGHPAHAVASSPTPEAVLEAV 176
Query: 229 P 229
Sbjct: 177 E 177
>gi|330752382|emb|CBL87334.1| uroporphyrinogen-III synthase [uncultured Sphingobacteria
bacterium]
gi|330752508|emb|CBL87456.1| uroporphyrinogen-III synthase [uncultured Sphingobacteria
bacterium]
Length = 252
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 57/239 (23%), Gaps = 15/239 (6%)
Query: 3 IVITRPIKKALRTQEKI-QKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAITSSE 58
I++++P + + I +K MP + + S
Sbjct: 12 ILVSQPKPQGRSPYDAISKKHKVAIDFMPFIEVEGVSLKEFRKARINPNHFSCVIFMSRN 71
Query: 59 SLSTLPANF------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
++ + + L QK K E +
Sbjct: 72 AMDHFFRICADLRVTMSQETKYFCKSEAIALYLQKHIQYRKRKVFYGDGTIKSFKELLLK 131
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ ++++ +L E++ + + + + + D + F
Sbjct: 132 YKKSGKILFICSDKNKGSIPAFLTENEFEFKEAVLFKTVPTDLSDFDV----STFDLMAF 187
Query: 173 YARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
++ V K A+ + + + S+ + +
Sbjct: 188 FSPYGVQSLLHNFPKYKQKVTRIAAFGPQTCQAVKDAGMRLDLQVPSKEYRSMSEAISR 246
>gi|269956602|ref|YP_003326391.1| Uroporphyrinogen III synthase HEM4 [Xylanimonas cellulosilytica DSM
15894]
gi|269305283|gb|ACZ30833.1| Uroporphyrinogen III synthase HEM4 [Xylanimonas cellulosilytica DSM
15894]
Length = 394
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/259 (8%), Positives = 64/259 (24%), Gaps = 37/259 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITS 56
++IT +++ +++ G P + + L + + T+
Sbjct: 28 VLIT-ADRRSGELAAALERRGARVRHAPALSIVPHVDDQALIAATRTLLAAPPDVLVATT 86
Query: 57 SESLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
+ T I A G + + G+ + + +
Sbjct: 87 GVGFRAWVEAADAYGVADELRTALAGTRIVARGPKANGAIQAAGYRADWVAESETSAEVA 146
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ + + + + L + + + Y P +
Sbjct: 147 ELLLSEGVAGLH--VAVQQHGAGADGLDVVLEKAGARVTNLVVYRWGPPPDPAALADSAR 204
Query: 165 Q----NADAILFYARSSVLYFFSLPLPAKISAAFL-----------CLSNNIASAIPASY 209
DA++F + + + A + + A +
Sbjct: 205 AAAAGEIDAVVFTSAPGAEAWLAAVEDAGYGPRVVERFTFGQMVAAAVGPVTARPLQHRG 264
Query: 210 KNVVTVACFPKETSLLKLL 228
+ + +L++ L
Sbjct: 265 ITPLQ-PERGRLGALVRSL 282
>gi|296392987|ref|YP_003657871.1| uroporphyrinogen III synthase HEM4 [Segniliparus rotundus DSM
44985]
gi|296180134|gb|ADG97040.1| Uroporphyrinogen III synthase HEM4 [Segniliparus rotundus DSM
44985]
Length = 402
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/264 (12%), Positives = 60/264 (22%), Gaps = 45/264 (17%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP 64
+T ++A + + G + + P I + L I +
Sbjct: 31 VT-AARRADEFAALLTRRGAVVLHAPAIVIIPLADDAELERVSR--EIIQNPPDVAVATT 87
Query: 65 ANFCRHTPIFAIGEASACLARQK----------------------GFTQIFHGKDNSINL 102
R A G A R + +S L
Sbjct: 88 GIGFRGWLEAAEGWGVAEELRNALQGSRLVARGPKATGAIRAAGLREAWSPSSESSSEVL 147
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRN-FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
+++ E L + F + L + + Y +
Sbjct: 148 ERLLEEGVQGLRVAVQLHGATTEFEPLPDFSEALQAAGAQVLAVPVYRWEPPHDQSAMDA 207
Query: 162 NLLQNADAIL----FYARSSVLY----------FFSLPLPAKISAAFLCLSNNIASAIPA 207
+ A + F + +V F L + A LC+ A+ + A
Sbjct: 208 LIAAVAQGTVDGVSFTSAPAVASMLGRAKETGMFEQLLDGFRAQVAALCVGPVTAAPLEA 267
Query: 208 SYKNVVTVACFPKETSLLKLLPLR 231
V S L L
Sbjct: 268 LG-----VPTSAPARSRLGALARH 286
>gi|258648281|ref|ZP_05735750.1| putative uroporphyrinogen-III synthase HemD [Prevotella tannerae
ATCC 51259]
gi|260852200|gb|EEX72069.1| putative uroporphyrinogen-III synthase HemD [Prevotella tannerae
ATCC 51259]
Length = 246
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 66/244 (27%), Gaps = 23/244 (9%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAI 54
I+I++P + + EK K G + P F + AI
Sbjct: 4 KILISQPYPTSEKSPYFDIEK--KYGIEIIFHPFIKVEGLSAKEFRQQKVQILDHTAIVF 61
Query: 55 TSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ N F + E A ++ + + +V
Sbjct: 62 TSRHAIDHFFTLCKELRVNVPEDMKYFGLSETIALYIQKYVQYRKRKVFFSQTGKWPDLV 121
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + + E+ L K+ Y + P+ +++
Sbjct: 122 QVMAK-HKTEKYLIPQSSVHTNEVEETLNAKKLNHTECVMYRTVSNDLPKA-----IEDY 175
Query: 168 DAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D ++ + S + C + AI S A P+ S+
Sbjct: 176 DLVIPFTPSGFEILCENYPDFREKGVKLGCFGRSTLKAITDSGYEPAVAAPSPEAPSMPA 235
Query: 227 LLPL 230
L L
Sbjct: 236 CLEL 239
>gi|121591884|ref|ZP_01679048.1| uroporphyrinogen-III synthetase [Vibrio cholerae 2740-80]
gi|121546250|gb|EAX56553.1| uroporphyrinogen-III synthetase [Vibrio cholerae 2740-80]
Length = 120
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 13/120 (10%), Positives = 36/120 (30%), Gaps = 1/120 (0%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-MQQSYGAIAITSSES 59
M +++TRP ++ + + + G + PL + LA S+ I S +
Sbjct: 1 MTVLVTRPDEQGAELCQLLHQQGIPALHHPLLAISASPQLAALAEDLSSFDIIIAVSQHA 60
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + + ++ + + E + + + +
Sbjct: 61 VIFSDQFLQHRRICWPNNAIYLAVGQKTAHVFSKACQQSVDYPEISDSEHLLALSMLRDV 120
>gi|323489961|ref|ZP_08095182.1| uroporphyrinogen-III synthase [Planococcus donghaensis MPA1U2]
gi|323396257|gb|EGA89082.1| uroporphyrinogen-III synthase [Planococcus donghaensis MPA1U2]
Length = 233
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 13/212 (6%)
Query: 20 QKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR-HTPIFAIGE 78
Q G +PL Y + TS S + I A+G
Sbjct: 29 QSFGANTKYVPL--VETIVRQSEKPDFTEYDWLIFTSRTSAEVFCSFNETVPVKIAAVGT 86
Query: 79 ASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEH 138
+A + ++ G F K S + + I E + K L G +N +
Sbjct: 87 QTAAVLKKHGHQVDFIPKMFSAD--QFIQEFPPVSGKAKCLFIKGQMAKN-----TISTM 139
Query: 139 KIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLS 198
+ + Y + + T+ ILF + S+V + + +
Sbjct: 140 SMQVDEWTVYDTVLNSENAKTISQFKD--VIILFASPSAVRAYRQAGGNWS-NIQVAAIG 196
Query: 199 NNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ AI + V + ++ +
Sbjct: 197 HVTKKAIIENGGTVDFMPEKYTYIEVINEIAK 228
>gi|241663751|ref|YP_002982111.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Ralstonia pickettii 12D]
gi|240865778|gb|ACS63439.1| protein of unknown function DUF513 hemX [Ralstonia pickettii 12D]
Length = 665
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 60/244 (24%), Gaps = 29/244 (11%)
Query: 15 TQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSESLSTLPA----- 65
+++ G PL L Y + S ++ A
Sbjct: 2 LVAALERHGLRTHQFPLLDIAPTPNLDDLRAALGDPSRYALVVFVSPNAVQQAFAAMPEG 61
Query: 66 -NFCRHTPIFAIGEASACLARQK--------GFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + P+ +G ASA H D + + V
Sbjct: 62 FRWPQEVPVAVVGPASAQALATHGVAPPAYRVIKPDTHAGDARQDSEALYARLDVPSLSG 121
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS-QDIAYPETT--MKNLLQNADAILFY 173
+ ++ + G D L E +R + Y + ++ +L + A
Sbjct: 122 REVLIVRGNGGREWLADQLREAGASVRTAEAYRRSVPVPDAAAWLALRAVLSSRHAWTLT 181
Query: 174 ARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ +V L A I + VT+ + L
Sbjct: 182 SSEAVRNLDELARANLSPADLDTLHGAPCFASHARIVEQAESLGFRDVTLTGAGDDRLLA 241
Query: 226 KLLP 229
+L
Sbjct: 242 SVLA 245
>gi|58699729|ref|ZP_00374385.1| uroporphyrinogen-III synthase, putative [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58533755|gb|EAL58098.1| uroporphyrinogen-III synthase, putative [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 159
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 56/153 (36%), Gaps = 8/153 (5%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I++TRP+ + T+ ++K GY + P+ + + + + TS S
Sbjct: 1 MKSILLTRPLLDSFNTRNILRKYGYKVYIEPVFTIKYLNPDI---SAYEFDVVISTSKNS 57
Query: 60 LSTLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ PI +G ++ A+ GF+ I N L I
Sbjct: 58 VKAFSQICKEDDFPIITVGNSTMQAAKNLGFSDIISADSNVDGLISFIKAHYSNAI---K 114
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+Y+ G+ + + L E +R + Y +
Sbjct: 115 FLYIRGQEVSCDLKKRLSEEDFNVREVVLYKTI 147
Score = 38.6 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 11/111 (9%), Positives = 36/111 (32%), Gaps = 8/111 (7%)
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
K ++ +F+ + L ++ + + + + + + D ++ ++
Sbjct: 1 MKSILLTRPLLDSFNTRNILRKYGYKVYIEPVFTIKYLNPDIS-----AYEFDVVISTSK 55
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+SV F + + + N+ A + + A L+
Sbjct: 56 NSVKAFSQICKEDDF--PIITVGNSTMQAAKNLGFSDIISADS-NVDGLIS 103
>gi|154174614|ref|YP_001407816.1| uroporphyrinogen-III synthase [Campylobacter curvus 525.92]
gi|112802666|gb|EAU00010.1| uroporphyrinogen-III synthase [Campylobacter curvus 525.92]
Length = 214
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 15/204 (7%)
Query: 27 VMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL---PANFCRHTPIFAIGEASACL 83
+ +P+S + F + A+ TS S L I+AIGE A
Sbjct: 18 INLPVSEIKFLK---FSLNLDEFDALVATSKNSFKALEFNHIKIKPDMQIYAIGEPCAKA 74
Query: 84 ARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLR 143
A++ GF++I+ K++ + K +YL K + + L ++ I +
Sbjct: 75 AKRCGFSKIYTAKNSH---GGEFAAEISPLLKGKKTLYLRAKSIVSNLGEILKQNGILVS 131
Query: 144 VIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
I Y S + + ++F + S+V F S + + A
Sbjct: 132 QIVAYESVCARLDKE---KMPPENSVLIFSSPSNVKNFILNFG-WLDSYKAVAIGETTAK 187
Query: 204 AIPASYKNVVTVACFPKETSLLKL 227
+ V+ + + ++L
Sbjct: 188 ELAK--FTDPLVSARQEINACVEL 209
>gi|126662831|ref|ZP_01733830.1| uroporphyrinogen-III synthase [Flavobacteria bacterium BAL38]
gi|126626210|gb|EAZ96899.1| uroporphyrinogen-III synthase [Flavobacteria bacterium BAL38]
Length = 222
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 63/190 (33%), Gaps = 14/190 (7%)
Query: 40 SVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNS 99
S+ Q TS +++ ++ + ++ + + ++ + S
Sbjct: 35 SISFETPQPKDYFIFTSKQAVKSVLKSDVKNVHSISCLCVGSKT--KRFLEKKGFSVIES 92
Query: 100 INLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
+ A+ +++ I+ G R +Y +++KI + Y ++
Sbjct: 93 ADYAEDLIQIIDSKYKSNSFIFFCGNIRKNTIPNYFLQNKITYNEVIVYETKPKP----- 147
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS----YKNVVTV 215
+ + D +LF++ S V F + C+ A + + +
Sbjct: 148 -HQVKEKFDGVLFFSPSGVNSFLEN--NTLENKTCFCIGTTTAKTLENIPEVSGYKNIII 204
Query: 216 ACFPKETSLL 225
A P +++
Sbjct: 205 ASQPTVENVI 214
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 165 QNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
Q D +F ++ +V + S + LC+ + + +V+ A + L
Sbjct: 42 QPKDYFIFTSKQAVKSVLKSDVKNVHSISCLCVGSKTKRFLEKKGFSVIESADYA--EDL 99
Query: 225 LKLLPLR 231
++++ +
Sbjct: 100 IQIIDSK 106
>gi|217077159|ref|YP_002334875.1| uroporphyrinogen III synthase/methyltransferase [Thermosipho
africanus TCF52B]
gi|217037012|gb|ACJ75534.1| uroporphyrinogen III synthase/methyltransferase [Thermosipho
africanus TCF52B]
Length = 462
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 63/226 (27%), Gaps = 13/226 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSES 59
I+IT + + E ++K G +P Y + E + Y + TS
Sbjct: 238 KILIT---TQYSKDFEILEKSGAQLYFVPTFYIKENVEKLEYLAKNLDKYETLIFTSKNG 294
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + + + A II E+++ + +
Sbjct: 295 VRLFLKWLKKFKIDLRGL----KAEIAVIGEKTAKEFEKVGVFADIIPEKELSEKLFEMI 350
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARSSV 178
I + I+ Y + + + + +L+ D ++F + SS
Sbjct: 351 DKRKKAAYITSTLGKNINE-ENIEKIEVYQTIENYRMKRVLNEVLKKEMDYVVFTSPSSF 409
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
L+F + K + I V + L
Sbjct: 410 LFFLKMAKLNKE--KICAIGPVTKKCIEDHGYKVEIMPKKYTYEEL 453
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 29/102 (28%), Gaps = 5/102 (4%)
Query: 136 IEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA-- 193
+ L + +Y ++ + L + ++F +++ V F KI
Sbjct: 253 EKSGAQLYFVPTFYIKENVEKLEYLAKNLDKYETLIFTSKNGVRLFLKWLKKFKIDLRGL 312
Query: 194 ---FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ A + L +++ R+
Sbjct: 313 KAEIAVIGEKTAKEFEKVGVFADIIPEKELSEKLFEMIDKRK 354
>gi|238650781|ref|YP_002916636.1| uroporphyrinogen-III synthase [Rickettsia peacockii str. Rustic]
gi|238624879|gb|ACR47585.1| uroporphyrinogen-III synthase [Rickettsia peacockii str. Rustic]
Length = 224
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 81/237 (34%), Gaps = 27/237 (11%)
Query: 1 MY-IVITRPIKKALRTQEKIQK--MGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ T ++I K + + PL + ++ + +Y I ITS
Sbjct: 1 MKSVLLTRHIEENNETIKEISKYHLDLRDIHCPLIKYNTLDFNIDI--LDNYSNIIITSK 58
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ S L + + ++ L ++ + + +++ ++
Sbjct: 59 YAASILTGHNLKQDIWVVGSKSKRLLGKK---------VMYTAKNVEDLIKHFPPDLYEQ 109
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + + + + P + +K N D IL Y+++S
Sbjct: 110 TIYLSSNEITKDLPSKIVRHIIYNVEYL-------NELPVSIIKAFKNNIDFILLYSQNS 162
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L L + + + +S +A+ + + V ++KLL
Sbjct: 163 ARTLVKLLLQNNLLEYLQDSLVVAISLKVANIVR-PFIKNVVYCDDQNLNDIIKLLS 218
>gi|260494551|ref|ZP_05814681.1| precorrin-4 C11-methyltransferase [Fusobacterium sp. 3_1_33]
gi|260197713|gb|EEW95230.1| precorrin-4 C11-methyltransferase [Fusobacterium sp. 3_1_33]
Length = 339
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++TR K+A+ E I K G IPV +P + + + L + Y AI S +
Sbjct: 276 KILVTRDKKQAVEMSENISKRGGIPVELPFIEIENLK--IDLKDLKKYKAILFNSPNGVK 333
Query: 62 TLPANF 67
N
Sbjct: 334 AFFENI 339
>gi|85374657|ref|YP_458719.1| uroporphyrinogen-III synthase [Erythrobacter litoralis HTCC2594]
gi|84787740|gb|ABC63922.1| uroporphyrinogen-III synthase [Erythrobacter litoralis HTCC2594]
Length = 229
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/230 (15%), Positives = 71/230 (30%), Gaps = 20/230 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+ + RP T + G MPLS S + Y + I S+ ++
Sbjct: 5 VFVLRPEPGLTTTLVAAFERGLNARGMPLSTVEPVAWSA---PAKPYEGLLIGSANAIRH 61
Query: 63 LPANFCR--HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ H P+ A+GE +A +AR+ G G + + +
Sbjct: 62 AGDELAKIAHLPVLAVGETTAQVAREAGLKVEMAGTGGLQKVLEGLAADPRSLL------ 115
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ + + +I + Y + E LL +L ++ + +
Sbjct: 116 ----RLAGEKHLELELPPQIEVDTRIVYRASYRPLNEAQ-AGLLDADAVMLLHSGETAAH 170
Query: 181 F---FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F + + + IA + A P + ++L+L
Sbjct: 171 FSQECERLGLDTSKLSLVAMVPRIAEMAGK-GWKALHTAASPTDDAVLEL 219
>gi|307564800|ref|ZP_07627328.1| uroporphyrinogen-III synthase [Prevotella amnii CRIS 21A-A]
gi|307346522|gb|EFN91831.1| uroporphyrinogen-III synthase [Prevotella amnii CRIS 21A-A]
Length = 251
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 63/243 (25%), Gaps = 20/243 (8%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I++++P + + +G V P F Y A+
Sbjct: 4 KILVSQPKPTSDKSPYYDIS--SDLGVELVFRPFFKVEGISSKEFRQQKINLLDYTAVVF 61
Query: 55 TSSESL-------STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ L F + E A ++ + + ++
Sbjct: 62 TSRHAVDNYFKLAKELRITIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGNTGKIDSLI 121
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ + N L HK+ Y + E +KN +
Sbjct: 122 PLM-QKHKNEKFLVPQSSVHNSAISSLLDAHKLKHTECIMYRTVTNNMSEEEVKNF--DY 178
Query: 168 DAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D ++ ++ + V + + A A+ + A + S+
Sbjct: 179 DMVVLFSTTGVKALKENVPGLEQGDVKVAAFGSATAKAVGDLGYRLDLEAPTAQHPSMTG 238
Query: 227 LLP 229
L
Sbjct: 239 ALK 241
>gi|238021062|ref|ZP_04601488.1| hypothetical protein GCWU000324_00959 [Kingella oralis ATCC 51147]
gi|237868042|gb|EEP69048.1| hypothetical protein GCWU000324_00959 [Kingella oralis ATCC 51147]
Length = 241
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 68/221 (30%), Gaps = 9/221 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM--QQSYGAIAITSSESL 60
I++ RP + G+ V +++F A+ S +
Sbjct: 4 ILLIRPENRLAADIAACTAAGWQAVPFAPIRIAPIPDTLFRLPQTIAPAQALFWVSPTAA 63
Query: 61 STLPANF---CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ P A+G +A RQ+GF I ++ + + A + +
Sbjct: 64 EIAAPHIGSLKTKIPHIAVGSQTAQALRQQGFANIHAPQNGNDSEAALALPIWHTLPQGG 123
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + G+ H L + ++ +CY T + Q A + ++ +
Sbjct: 124 TIVIIRGQGGREHLAQTLHQRGFAVQYAECYQRIPQPLNWQTFQ-AAQAQAAWVTSSQLA 182
Query: 178 VLYFFSLPLPAKISAA---FLCLSNNIASAIPASYKNVVTV 215
F P + + IA + A + V
Sbjct: 183 QELFTQCPQAFTQNLKSLLYFTQHMRIAQTLTALGASHVHT 223
Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 9/112 (8%), Positives = 27/112 (24%), Gaps = 2/112 (1%)
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ + + R I + + A A+ + + ++
Sbjct: 4 ILLIRPENRLAADIAACTAAGWQAVPFAPIRIAPIPDTLFRLPQTIAPAQALFWVSPTAA 63
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
K + + + A A+ + ++ L L
Sbjct: 64 EIAAPHIGSLKTKIPHIAVGSQTAQALRQQGFANIHAPQNGNDSE--AALAL 113
>gi|317507942|ref|ZP_07965637.1| uroporphyrinogen-III synthase HemD [Segniliparus rugosus ATCC
BAA-974]
gi|316253753|gb|EFV13128.1| uroporphyrinogen-III synthase HemD [Segniliparus rugosus ATCC
BAA-974]
Length = 395
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 64/262 (24%), Gaps = 41/262 (15%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITSSE 58
+T ++A + + G + P I + L + T+
Sbjct: 24 VT-AARRADELTALLTRRGGAVLHAPAIVIIPLADDAELERMSREIIADPPDVVVATTGI 82
Query: 59 SLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAK 104
+ + A G + R G +++ S L +
Sbjct: 83 GFRGWLEAAEGWGVAEELRTALQNSRLVARGPKATGAIRAAGLREVWSPCSESSSEVLER 142
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRN-FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ E L + F + L + + Y + + +
Sbjct: 143 LLAEGVEGLRVAVQLHGATTEFEPLPDFSEALRHAGAQVLPVPVYRWEPPSDQSAMDTLI 202
Query: 164 LQNADAIL----FYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASY 209
A+ + F + +V L + A LC+ A+ + A
Sbjct: 203 AAVANGTVDGVSFTSAPAVASMLGRAKETNMLDQLLSGFRSHVAALCVGPVTAAPLEALG 262
Query: 210 KNVVTVACFPKETSLLKLLPLR 231
V S L L
Sbjct: 263 -----VPTTAPSRSRLGALARH 279
>gi|297170260|gb|ADI21297.1| hypothetical protein [uncultured gamma proteobacterium
HF0010_09F21]
Length = 216
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 66/212 (31%), Gaps = 16/212 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I+ TR E +PL + S ++ + SS ++
Sbjct: 1 MNIIDTRAKG-NFEFVEM-----NSIKNIPLFKLVPIEYSFEDN---NFQNVIFQSSPAV 51
Query: 61 STLPANFCRHTP-IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
IFA+G+ + Q S L K I E
Sbjct: 52 ENFRDLNSLQDKQIFAMGKGTEATLLQSNLVAKIPNSPGSDGLMKTIKENSRGDD----Y 107
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + G+ E+ L E ++ I CY + +K ++A+ I+F ++ S
Sbjct: 108 LIVKGEGGLDQIENKLKEMGKNVKQICCYKREKFQ-NYEHLKEDFESANIIIFPSKFSAE 166
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKN 211
+F FL +S I + +
Sbjct: 167 IYFKEINFTHHKT-FLGISPRINKYVESLGFK 197
>gi|134100339|ref|YP_001106000.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Saccharopolyspora erythraea NRRL 2338]
gi|291007690|ref|ZP_06565663.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Saccharopolyspora erythraea NRRL 2338]
gi|133912962|emb|CAM03075.1| uroporphyrinogen-III synthetase [Saccharopolyspora erythraea NRRL
2338]
Length = 385
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/254 (8%), Positives = 53/254 (20%), Gaps = 32/254 (12%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS------YGAIAITSSE 58
+T ++A +++ G P + + L + T+
Sbjct: 14 VT-SARRADELGTLLERRGARVQHGPALRIVPLADDTELRRATDECIQAPPDVVVATTGI 72
Query: 59 SLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + S + A ++
Sbjct: 73 GFRGWVEAAEGWGVGDDLLSALHDSRMLARGPKARGAMRAAGLPDPWSPESESSAGVLEM 132
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY---PETTMKN-LL 164
+ + F L + + Y E +
Sbjct: 133 LLSEPLAGRRVAVQLHGRPLPEFTAALRAAGAHVVELPVYRWSAPTDVTGLENLLDAVCA 192
Query: 165 QNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVVT 214
DA+ F + + +L C+ A+ + VV
Sbjct: 193 HELDAVTFTSAPAAENLLALAGERGRLDRLVSALRGPVLAACVGPATAAPLAEHRIAVV- 251
Query: 215 VACFPKETSLLKLL 228
+ + L++ L
Sbjct: 252 MPERYRLGGLVRAL 265
>gi|255018087|ref|ZP_05290213.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL F2-515]
Length = 319
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/223 (8%), Positives = 59/223 (26%), Gaps = 15/223 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 102 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVLDVVPTKTKEELSEVSELLFTSKEAVE 161
Query: 62 TLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + I ++I+E
Sbjct: 162 RFFDYLAQLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQE 221
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ G + + ++ + ++ Y + + L + + + F +
Sbjct: 222 NAS-NLIIGSIVDTAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSS 276
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVT 214
SV + + + L + ++ + + N
Sbjct: 277 RSVQNLLDVLTTEEKAILQTKTILSIGRFTSATLASFGINHFI 319
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 32/121 (26%), Gaps = 8/121 (6%)
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + + + + + + Q + T K L +LF ++
Sbjct: 100 HTKVLLPRARAGKSMLAEQIRDLGGEVTMYP--NIQVLDVVPTKTKEELSEVSELLFTSK 157
Query: 176 SSVLYFFSLPLPAKI------SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+V FF + + + A + +L+ LP
Sbjct: 158 EAVERFFDYLAQLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLP 217
Query: 230 L 230
Sbjct: 218 R 218
>gi|169634610|ref|YP_001708346.1| uroporphyrinogen-III synthase [Acinetobacter baumannii SDF]
gi|169153402|emb|CAP02533.1| uroporphyrinogen-III synthase (UROS) (Uroporphyrinogen-III
cosynthetase) (Hydroxymethylbilane hydrolyase
[cyclizing]) [Acinetobacter baumannii]
Length = 255
Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 68/221 (30%), Gaps = 23/221 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITS 56
M + TRP +A +Q G+ +PL + S L AI + S
Sbjct: 1 MLFINTRPDSRAAELTHALQNKGFQVESLPLLELVAQPFSESLFQLYQQLTGAQAIVVVS 60
Query: 57 SESLSTLPANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ ++ A+G+A+A G + S + + +
Sbjct: 61 PTAVDVGMQYLAQSGLKIDELKYIQWIAVGQATANRLHDYGIEAHVPEVETSEGMLNLPL 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK------ 161
++ + + G+ + L + I + Y +T K
Sbjct: 121 LHRMQ--KSGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYRRLCPQASYSTFKHLTQNS 178
Query: 162 NLLQNADAILFYARSSVLYFFSLP--LPAKISAAFLCLSNN 200
N + +L + +S Y+ L A+ +L L
Sbjct: 179 NYNLDKWLVLITSEASWKYWLELCLKNKAQPDCVYLVLGPR 219
>gi|319942680|ref|ZP_08016987.1| hypothetical protein HMPREF9464_02206 [Sutterella wadsworthensis
3_1_45B]
gi|319803763|gb|EFW00698.1| hypothetical protein HMPREF9464_02206 [Sutterella wadsworthensis
3_1_45B]
Length = 262
Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 69/250 (27%), Gaps = 24/250 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI-HDRESVFLAMQQSYGAIAITS----- 56
+++ RP + R E ++ G V P + + + +
Sbjct: 12 VILMRPGEANNRLAELLEAQGIHAVRWPAFSIELPEETDHITERLSNLDDVEMVVLPSPA 71
Query: 57 -SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA---KIIVEQKVL 112
+ + + H + +GE +A + R ++ + +
Sbjct: 72 SVAAAAHWVREWPEHITLATVGEGTARVIRAAWGPKVKLIYPEGDASHSGSEALWPLVQA 131
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM----KNLLQNAD 168
+++L G+ + + V+ Y + + K +L +
Sbjct: 132 HGAPSRVLFLRGQTGREWLPEQFRRIGSDVVVLSTYIRVPLELTVPQLHRLEKAILGPSP 191
Query: 169 AILFYARSSVLYFFSLPLP------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
I + +V P L + + S + + + + P E
Sbjct: 192 LIYLTSTDAVDVLMHAVRPVPNARMWITRGKALTIHPRVESRLREAGFQSIELT-SPDEN 250
Query: 223 SLLKLLPLRR 232
+++ R
Sbjct: 251 ---EVIARIR 257
>gi|78777426|ref|YP_393741.1| uroporphyrinogen-III synthase [Sulfurimonas denitrificans DSM 1251]
gi|78497966|gb|ABB44506.1| uroporphyrinogen-III synthase [Sulfurimonas denitrificans DSM 1251]
Length = 302
Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 15/205 (7%)
Query: 29 MPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANF--CRHTPIFAIGEASACLARQ 86
+P+ + SY A+ TS ++ TL + + P++ I +A +A
Sbjct: 106 LPVIKIETINTTF---NISSYDALIFTSKSAVYTLNSYNTEWKSKPLYVIAPQTAKVASN 162
Query: 87 KGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVID 146
G F ++N ++ + K ++Y+ G + + L + + +
Sbjct: 163 LGGKIKFVSRENH---GDEFADELIPLLKNKKVLYVRGSKVVSNLVEKLNANDVICDEVI 219
Query: 147 CYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIP 206
Y + + L I+F + S++ F S + + + P
Sbjct: 220 VYQTVCSELKKKI---KLPKNSVIIFSSPSTIECFLKNV-SWDESYKAVSIGHTTQKYFP 275
Query: 207 ASYKNVVTVACFPKETSLL-KLLPL 230
V VA P S + K + L
Sbjct: 276 PY-ITPV-VADTPSLDSCVKKAIEL 298
>gi|226313855|ref|YP_002773749.1| uroporphyrin-III C-methyltransferase [Brevibacillus brevis NBRC
100599]
gi|226096803|dbj|BAH45245.1| uroporphyrin-III C-methyltransferase [Brevibacillus brevis NBRC
100599]
Length = 492
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/222 (12%), Positives = 62/222 (27%), Gaps = 20/222 (9%)
Query: 2 YIVITR--PIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+ + R + ++++G + +PL H L +Y + + +
Sbjct: 255 RVAVARRVSDEGNSELVIALEQLGAEVMPIPL--VEHCTFDTPLTELATYRWLVFENEQQ 312
Query: 60 LSTLPANFCRHT--------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+S + + + G+ ++ ++G +N+ LA +
Sbjct: 313 VSFFTSVLRQQRYDVRRLTSKLAVCGQRASEAFEKQGIYPDLMLDENTSLLAL--PDLLA 370
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
L ++ L KP+ + H I + + A + + L D
Sbjct: 371 LEKEEQVLYAGERKPQKITLDHGKAIHVIQAGTLVWDGKELSAKKDGCSFDSLATDDVYT 430
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
A +C+ A A V
Sbjct: 431 LS------ALAQFAGDAWSKTPIVCVGKETAVAAREMGWQSV 466
>gi|325286453|ref|YP_004262243.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489]
gi|324321907|gb|ADY29372.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489]
Length = 525
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 67/207 (32%), Gaps = 12/207 (5%)
Query: 21 KMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEAS 80
G +R + + + TS ++ ++ N+ F
Sbjct: 325 ANGIAAESSDFIKISSNRIPPRVFK-KEIENVVFTSKNAVESVLTNYAGSELQFNNIYCV 383
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
R+ + AK + E V K + Y G R L ++ I
Sbjct: 384 GRKTRRF-IKNNIGPVAHFEKRAKELAEYLVANLAVKEITYFSGNLRLDDMPSILEKNDI 442
Query: 141 PLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNN 200
+ I+ Y ++ A K + +A+LFY+ S + F K +A C+ +
Sbjct: 443 KVNEIEAYQTKFDA------KKVPSTVEAVLFYSPSGIESFL---KENKANAIAFCIGDT 493
Query: 201 IASAIPASYKNVVTVACFPKETSLLKL 227
A+ V VA P S++ L
Sbjct: 494 TAAEAKKH-FADVRVAKLPTVESVIDL 519
>gi|290959973|ref|YP_003491155.1| transcriptional regulator [Streptomyces scabiei 87.22]
gi|260649499|emb|CBG72614.1| putative transcriptional regulator [Streptomyces scabiei 87.22]
Length = 384
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 61/241 (25%), Gaps = 35/241 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSE 58
+T ++A +Q+ G + P + + L + Q+ + T++
Sbjct: 22 VT-AARRADELGALLQRRGAAVLHAPALRIVPLADDSELLAATKDLLDQAPDIVVATTAI 80
Query: 59 SLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ A G R G T+ + S ++A+++
Sbjct: 81 GFRGWIEAADGWGLGEALLDRLRGVELLARGPKVKGAIRAAGLTEEWSPS--SESMAEVL 138
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----N 162
+ L F + L + + Y +
Sbjct: 139 DRLLEQGVEGRRLAIQLHGEPLPGFVESLRAAGAEVVGVPVYRWMPPEDITPMDRLLDAA 198
Query: 163 LLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNV 212
+ + DA+ F + + L C+ A + A +
Sbjct: 199 IGRGLDALTFTSAPAAASLLSRAEDRGLLPELLNALGHDVLPACVGPVTALPLQAHGVDT 258
Query: 213 V 213
V
Sbjct: 259 V 259
>gi|254438512|ref|ZP_05052006.1| uroporphyrinogen-III synthase [Octadecabacter antarcticus 307]
gi|198253958|gb|EDY78272.1| uroporphyrinogen-III synthase [Octadecabacter antarcticus 307]
Length = 229
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 62/231 (26%), Gaps = 16/231 (6%)
Query: 3 IVITRPIKKALRTQEKIQK-MG-YIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+++TRP A R + ++ G + + P + + TS +
Sbjct: 9 VLVTRPEADAQRFVDALRAVSGQFDVITSPAFENEALSVDMP-----DFDTAIFTSQAGV 63
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ P R A T + ++ A +V + P L+
Sbjct: 64 AQAPRGNGRPAFCVGDATA-------NAATDAGYVSVSAGGSADDLVALILRQRPDDALL 116
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI-AYPETTMKNLLQNADAILFYARSSVL 179
++ G L E + + + Y I ++ +V
Sbjct: 117 HIRGAIARGDITKSLNEAGLRCQDVVVYRKATRGPSQTARDALESSEMVIIPLFSAETV- 175
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ +S+ +A A + V+ ++ +
Sbjct: 176 SILENWPLHFGGCVVVAISDAVAGASRVLSPLNILVSDANDMRAMAQATAR 226
>gi|325860152|ref|ZP_08173277.1| uroporphyrinogen-III synthase [Prevotella denticola CRIS 18C-A]
gi|327312726|ref|YP_004328163.1| uroporphyrinogen-III synthase [Prevotella denticola F0289]
gi|325482239|gb|EGC85247.1| uroporphyrinogen-III synthase [Prevotella denticola CRIS 18C-A]
gi|326944202|gb|AEA20087.1| uroporphyrinogen-III synthase [Prevotella denticola F0289]
Length = 250
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 64/240 (26%), Gaps = 16/240 (6%)
Query: 2 YIVITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITS 56
I++++P + + + +G V P F Y A+ TS
Sbjct: 4 KILVSQPKPSSDKSPYYDIATDLGVELVFRPFFKVEGLSAKEFRQQKVNPLDYTAVVFTS 63
Query: 57 SESL-------STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ + F + E A ++ + + ++
Sbjct: 64 RHAVDNYFSLAKEMRITIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGNTGKIDSLIPT 123
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + L +K+ + Y + E +KN + D
Sbjct: 124 M-QKHKVEKYLVPQSSVHTDALSKLLDANKLKHKECVMYRTVSNGLTEEEVKNF--DYDM 180
Query: 170 ILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++F++ + V + A + A + A + S+ L
Sbjct: 181 LVFFSPTGVKALKENIPGFEQGDIKIAAFGPATAREVEAQGLKLDLQAPSKEYPSMTGAL 240
>gi|323302986|gb|EGA56790.1| Hem4p [Saccharomyces cerevisiae FostersB]
Length = 275
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 80/246 (32%), Gaps = 33/246 (13%)
Query: 18 KIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAITSSESLSTLPANFCRH- 70
+ + + P+ +PL H + + I ITS ++ +L
Sbjct: 25 ECRSKAFEPIFVPLIKHTHVIQDFRNVLNTIPNYLNTINYIIITSQRTVESLNEAIIPTL 84
Query: 71 ----------TPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLF---TP 115
++ +G A+A R+ GF + G+D N LA II++ P
Sbjct: 85 TSEQKAALLSKTVYTVGPATANFIRRSGFINVKGGEDAGNGSILADIIIDDLSTDIKACP 144
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD------- 168
L++L G+ R L I +R + Y +++++ + ++ D
Sbjct: 145 PSELLFLVGEIRRDIIPKKLHSKGIKVREVVTYKTEELSDGFKRFIHAMKECDEDEVFSD 204
Query: 169 AILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++ ++ + + + + V+ P SL
Sbjct: 205 WVVVFSPQGTKEITQYLGDSNRLPGCHLRVASIGPTTKKYLDDNDVTSDVVSPKPDPKSL 264
Query: 225 LKLLPL 230
L + L
Sbjct: 265 LDAIEL 270
>gi|6324852|ref|NP_014921.1| Hem4p [Saccharomyces cerevisiae S288c]
gi|1708177|sp|P06174|HEM4_YEAST RecName: Full=Uroporphyrinogen-III synthase; Short=UROIIIS;
Short=UROS; AltName: Full=Hydroxymethylbilane hydrolyase
[cyclizing]; AltName: Full=Uroporphyrinogen-III
cosynthase
gi|1279703|emb|CAA61783.1| mitochondrial import protein ORF1 [Saccharomyces cerevisiae]
gi|1420621|emb|CAA99504.1| HEM4 [Saccharomyces cerevisiae]
gi|285815150|tpg|DAA11043.1| TPA: Hem4p [Saccharomyces cerevisiae S288c]
Length = 275
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 80/246 (32%), Gaps = 33/246 (13%)
Query: 18 KIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAITSSESLSTLPANFCRH- 70
+ + + P+ +PL H + + I ITS ++ +L
Sbjct: 25 ECRSKAFEPIFVPLIKHTHVIQDFRNVLNTIPNYLNTINYIIITSQRTVESLNEAIIPTL 84
Query: 71 ----------TPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLF---TP 115
++ +G A+A R+ GF + G+D N LA II++ P
Sbjct: 85 TSEQKAALLSKTVYTVGPATANFIRRSGFINVKGGEDAGNGSILADIIIDDLSTDIKACP 144
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD------- 168
L++L G+ R L I +R + Y +++++ + ++ D
Sbjct: 145 PSELLFLVGEIRRDIIPKKLHSKGIKVREVVTYKTEELSDGFKRFIHAMKECDEDEVFSD 204
Query: 169 AILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++ ++ + + + + V+ P SL
Sbjct: 205 WVVVFSPQGTKEITQYLGDSNRLPGSHLRVASIGPTTKKYLDDNDVTSDVVSPKPDPKSL 264
Query: 225 LKLLPL 230
L + L
Sbjct: 265 LDAIEL 270
>gi|282859937|ref|ZP_06269025.1| uroporphyrinogen-III synthase [Prevotella bivia JCVIHMP010]
gi|282587340|gb|EFB92557.1| uroporphyrinogen-III synthase [Prevotella bivia JCVIHMP010]
Length = 248
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 58/241 (24%), Gaps = 16/241 (6%)
Query: 2 YIVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITS 56
I++++P + +G V P F Y A+ TS
Sbjct: 4 KILVSQPKPTSDKSPYYDIASDLGVEMVFRPFFKVEGLSSKEFRQQKINLLDYTAVVFTS 63
Query: 57 SESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
++ F + E A ++ + ++
Sbjct: 64 RHAVDNYFKLAKEMRVTIPEDMKYFCVIETIALYIQKYVQYRKRKVFFGDTGKIDSLIPL 123
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ + N L K+ Y + E +K+ + D
Sbjct: 124 M-QKHKNERFLVPQSSVHNNAISSLLDAQKLKHTECVMYRTVTNNMSEEEVKSF--DYDM 180
Query: 170 ILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ ++ + V + + A+ + A + S+ L
Sbjct: 181 VVLFSTTGVKALKENVPGLEQGEVKVAAFGPATSKAVVDEGYRLDLEAPTAEHPSMTGAL 240
Query: 229 P 229
Sbjct: 241 K 241
>gi|325144185|gb|EGC66492.1| uroporphyrinogen-III synthase [Neisseria meningitidis M01-240013]
Length = 249
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 66/229 (28%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D+ S+ + A+ S ++
Sbjct: 5 LIVRPSGRAKDDVEICRRTGWQAEVLSPIEIETDKASLKRLPEMYARADAVFWVSPTAVE 64
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I A + S + + D + + A + +
Sbjct: 65 TAVPYLNLSDGIKAQIAVGQGSRRALERCLVRTVIAPDDGNDSEAVLRLTVWNSLPEGAR 124
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 125 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 182
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 183 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 229
>gi|239993016|ref|ZP_04713540.1| uroporphyrinogen-III synthetase [Alteromonas macleodii ATCC 27126]
Length = 218
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 71/202 (35%), Gaps = 7/202 (3%)
Query: 32 SYFIHDRESVFLAMQQSY-GAIAITSSESL----STLPANFCRHTPIFAIGEASACLARQ 86
+R++ + + AI +TS ++ L I A+G+A+A +
Sbjct: 9 IDISSERKAAAEFLASNAVNAIVVTSVYAVDTVIEGLRETANELPLIIAVGDATARKLQA 68
Query: 87 --KGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+ F+ + I+ ++ + ++ + G+ L E I +
Sbjct: 69 GLQAFSSAQVAIPEAHTSEGILAMHQLNEANCQHVVIIKGEGGRDAIATGLDEKGILVNS 128
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
Y + + P T + + I+ + + L + A S +L +S+ IA
Sbjct: 129 FCVYKREQLTSPIYTKRWKMGEVSGIIATSEAMALQLIAQFGQALKSIKWLTVSDRIAKT 188
Query: 205 IPASYKNVVTVACFPKETSLLK 226
+ + V V + +L+
Sbjct: 189 LTSQGIKEVAVCQRATDQALIA 210
>gi|297159962|gb|ADI09674.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces bingchenggensis BCW-1]
Length = 401
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/239 (10%), Positives = 58/239 (24%), Gaps = 35/239 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSE 58
+T ++A +++ G + P + + L + + + T++
Sbjct: 38 VT-AARRADELAALLRRRGAAVMHAPALRIVPLADDAELLTATKQLLDHAPDVVIATTAI 96
Query: 59 SLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ A G R G T+ + S +LA+++
Sbjct: 97 GFRGWVEAADGWGLGDSLLARLRGARLLARGPKVRGAIRAAGLTEEWFPA--SESLAEVL 154
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+ F + L + + Y +
Sbjct: 155 DRLLEEGVDGSRIAVQLHGEPLPGFVESLRVAGAEVVGVPVYRWMPPEDIGPVDRLLDAT 214
Query: 163 LLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKN 211
+ + DA+ F + + L + C+ A + A
Sbjct: 215 VARVLDALTFTSAPAAASLLDRAERRGMRDELLDALRHDVLPACVGPVTALPLEAHGIP 273
>gi|170097493|ref|XP_001879966.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645369|gb|EDR09617.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 283
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 83/272 (30%), Gaps = 45/272 (16%)
Query: 2 YIVITRPIKKA--LRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAIAITS 56
+++ R + R Q + GY + +P+ +H + + +++ + ITS
Sbjct: 3 KVLLLREPSQGVPDRYQTTLTSSGYRTICVPVLETVHTNLNALKDIIREPKAFRGVIITS 62
Query: 57 SESLSTLPANF----------------CRHTPIFAIGEASACLARQKGFTQIFHGKD--- 97
P + +G+A+A ++ G
Sbjct: 63 RRVCDAWKLALADLAESPHEDREGVARWSTVPFYVVGQATASALKELESLYAGIGFCRLD 122
Query: 98 ---NSINLAKIIVEQKVLF--TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD 152
S A+ + + + L+YL G + L I L + Y +Q
Sbjct: 123 IRGESSGTAEQLGHFILNDRTSRSGQLLYLTGDKNRDTLPNILPGGGIELHPLRVYETQG 182
Query: 153 IAYPETTMKNLLQNA------DAILFYARSSVLYF---------FSLPLPAKISAAFLCL 197
+ E + L++ I+++A S+ + FSL +
Sbjct: 183 SSTFEQELLVALESFPKDYSAWWIVYFAPSAAEFVTPILRRHFDFSLSEKTGRKMKIASI 242
Query: 198 SNNIASAIPA-SYKNVVTVACFPKETSLLKLL 228
A+ + V VA P L+ +
Sbjct: 243 GPTTATFLREVLELQVDAVASKPTPEELVSSI 274
>gi|291532779|emb|CBL05892.1| Uroporphyrinogen-III synthase [Megamonas hypermegale ART12/1]
Length = 140
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 40/133 (30%), Gaps = 6/133 (4%)
Query: 100 INLAKIIVEQKVLFTPQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ +A+ I+ + ++ + L + + V + Y ++ +
Sbjct: 1 MFMAEGILNVLKDDIKEGTKVLIPRAQKAREALPIGLRQLGAVVDVAETYTTKMADTNKE 60
Query: 159 TMKNLLQNADA--ILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVV 213
+K LL+ + F + S+V L + A + A+ V
Sbjct: 61 EIKALLKEHKVDMVTFTSSSTVENLLKLIDEDKSLLDNVAKASIGPITANTCKKHGLIVD 120
Query: 214 TVACFPKETSLLK 226
A L+
Sbjct: 121 VEADVYTIDGLVA 133
>gi|225010398|ref|ZP_03700870.1| Uroporphyrinogen III synthase HEM4 [Flavobacteria bacterium
MS024-3C]
gi|225005877|gb|EEG43827.1| Uroporphyrinogen III synthase HEM4 [Flavobacteria bacterium
MS024-3C]
Length = 230
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/230 (15%), Positives = 70/230 (30%), Gaps = 19/230 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I+ T+ ++ A R ++ G+ + A Q TS +++
Sbjct: 6 ILSTKALQPAQR--SRLLAAGFSVQSYNAVAAEALTFDMPAAPFQG----IFTSQNAVAA 59
Query: 63 LPANFCRHTPIFAIGEAS----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
++ T + + + + + H +S + I+ P
Sbjct: 60 FLSHEHLSTALPILEGVYCVGERSAQKLRKKGVLVHAVADSAADLEKILFSGRYALESSP 119
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
L Y G + K PL + Y + + K + +A+ F++ S V
Sbjct: 120 LYYFCGNRHLPTLPNAFKAAKRPLNIHIVYETNGVE------KAFDRPFEALFFFSPSGV 173
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F A + + A A+ A VA P +L L
Sbjct: 174 AAFTENNKIG--DAFVVAIGPTTAQAVAAH-TKQYVVAKKPSFAHMLSAL 220
>gi|297194081|ref|ZP_06911479.1| uroporphyrinogen-III synthetase [Streptomyces pristinaespiralis
ATCC 25486]
gi|197720917|gb|EDY64825.1| uroporphyrinogen-III synthetase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 386
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/239 (8%), Positives = 55/239 (23%), Gaps = 31/239 (12%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSE 58
+T ++A +Q+ G + P + + L + + T++
Sbjct: 23 VT-AARRADELGALLQRRGAAVLHAPALRIVPLADDTELLAATKELIDHTPDVVVATTAI 81
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVE 108
+ + S ++A+++
Sbjct: 82 GFRGWVEAADGWGLGEQLLGRLRDAELLARGPKVKGAIRAAGLTEEWSPASESMAEVLDR 141
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----NLL 164
+ + F + L E + ++ Y + +
Sbjct: 142 LLGEGVAGRRVALQLHGEPLPGFVESLREAGADVVLVPVYRWMPPEDLAPLDRLLDAAVS 201
Query: 165 QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ DA+ F + + L C+ A + A+ V
Sbjct: 202 RGLDAVTFTSAPAAASLLNRAETRGLLTELLAALDHDVLAACVGPVTAVPLQAAGVPTV 260
>gi|190407579|gb|EDV10846.1| uroporphyrinogen III synthase [Saccharomyces cerevisiae RM11-1a]
gi|207340939|gb|EDZ69135.1| YOR278Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269622|gb|EEU04904.1| Hem4p [Saccharomyces cerevisiae JAY291]
gi|259149753|emb|CAY86557.1| Hem4p [Saccharomyces cerevisiae EC1118]
gi|323335478|gb|EGA76764.1| Hem4p [Saccharomyces cerevisiae Vin13]
gi|323352188|gb|EGA84725.1| Hem4p [Saccharomyces cerevisiae VL3]
Length = 275
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 81/246 (32%), Gaps = 33/246 (13%)
Query: 18 KIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAITSSESLSTLPANFCRH- 70
+ + + P+ +PL H + + I ITS ++ +L
Sbjct: 25 ECRSKAFEPIFVPLIKHTHVIQDFRNVLNTIPNYLNTINYIIITSQRTVESLNEAIIPTL 84
Query: 71 ----------TPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQ---KVLFTP 115
++ +G A+A R+ GF + G+D N LA II++ + P
Sbjct: 85 TSEQKAALLSKTVYTVGPATANFIRRSGFINVKGGEDAGNGSILADIIIDDLCTDIKACP 144
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD------- 168
L++L G+ R L I +R + Y +++++ + ++ D
Sbjct: 145 PSELLFLVGEIRRDIIPKKLHSKGIKVREVVTYKTEELSDGFKRFIHAMKECDEDEVFSD 204
Query: 169 AILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++ ++ + + + + V+ P SL
Sbjct: 205 WVVVFSPQGTKEITQYLGDSNRLPGSHLRVASIGPTTKKYLDDNDVTSDVVSPKPDPKSL 264
Query: 225 LKLLPL 230
L + L
Sbjct: 265 LDAIEL 270
>gi|152991081|ref|YP_001356803.1| uroporphyrinogen-III synthase [Nitratiruptor sp. SB155-2]
gi|151422942|dbj|BAF70446.1| uroporphyrinogen-III synthase [Nitratiruptor sp. SB155-2]
Length = 213
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 15/183 (8%)
Query: 29 MPLS--YFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT--PIFAIGEASACLA 84
+PL F L Y + TS + + P+ +IG A+
Sbjct: 17 LPLIGQKFFPISIDFSL-----YDYLIFTSKNGVRAVEQISHEWHLKPVISIGSATTKAV 71
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
++KG ++ G + + + E F K +Y+ K + L ++ +
Sbjct: 72 KEKGGRVVWEGSEGYGDT--LAKEIVAHFPNDKKYLYIRPKKVVSNLVPILRQNGFEIDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y + + I+F + S+V FF S + + A A
Sbjct: 130 VIAYETVCRKC---ETVQKPEPGSVIIFSSPSTVRCFFRCFAWDD-SYKAVVIGKQTAQA 185
Query: 205 IPA 207
+P
Sbjct: 186 LPK 188
>gi|325137819|gb|EGC60394.1| uroporphyrinogen-III synthase [Neisseria meningitidis ES14902]
Length = 246
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 64/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESLS 61
+I RP +A E ++ + ++ D+ S+ + A+ S ++
Sbjct: 2 LIVRPSGRAKDDVETCRRAEWQAEVLSPIEIETDKASLKRLPEMYARADAVFWVSPTAVE 61
Query: 62 TLPANFCRHTPIFAIGEA---SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I S + + D + + A + +
Sbjct: 62 TAVPYLNLSDGIKMHISVGQGSRRALERCLGRTVIAPDDGNDSEAVLRLPVWNSLPEGAR 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 122 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSAELV 179
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F+ P S + IA A+ V P +
Sbjct: 180 QSLFAQVPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 226
>gi|307719295|ref|YP_003874827.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM
6192]
gi|306533020|gb|ADN02554.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM
6192]
Length = 672
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/220 (13%), Positives = 64/220 (29%), Gaps = 25/220 (11%)
Query: 2 YIVIT--RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE---SVFLAMQQSYGAIAITS 56
+I++T R + G V +P + R+ + SY + TS
Sbjct: 463 HILVTGTRAAPW--------RARG-EVVHIPCIATVPRRDGRVQEVMEGLSSYTMLIFTS 513
Query: 57 SESLSTLPANFCRH--------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
++ H + AIG +A + +G +++S ++
Sbjct: 514 RHGVAHFVDRLLEHGDLRLLAGMRVVAIGRVTAEALKDRGLVPDLIPEEDSA--EGLVSL 571
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ ++ + ++ L + + Y + YPE + D
Sbjct: 572 AAKENWRDEKILIPCSSLSDPFLQEELSRQGNTVDAVPFYDTVPAPYPEALPLEV-GAFD 630
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
++F + S V F A+ +
Sbjct: 631 EVVFLSPSGVRVFRERFGALPPGIRIHTPGATTRRAVDDA 670
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/202 (8%), Positives = 40/202 (19%), Gaps = 10/202 (4%)
Query: 36 HDRESVFLAMQQSYGAIAIT-----SSESLSTLPANFCRHTPIFAIGEASACLARQKGFT 90
++ + L A + HTP + A+ T
Sbjct: 370 PPERALIPPPDGRLSCVYYMAGEEFPRICARFLEAGWDPHTPAVVVSAAARPEQTHLSLT 429
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
+ ++ + + +
Sbjct: 430 LEDGARWTGSLPRPALLLVGATGVSRSWWEDRPHILVTGTRAAPWRARGEVVHIPCIATV 489
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAK-----ISAAFLCLSNNIASAI 205
+ L + ++F +R V +F L + + A A+
Sbjct: 490 PRRDGRVQEVMEGLSSYTMLIFTSRHGVAHFVDRLLEHGDLRLLAGMRVVAIGRVTAEAL 549
Query: 206 PASYKNVVTVACFPKETSLLKL 227
+ L+ L
Sbjct: 550 KDRGLVPDLIPEEDSAEGLVSL 571
>gi|149194573|ref|ZP_01871669.1| uroporphyrinogen-III synthetase [Caminibacter mediatlanticus TB-2]
gi|149135317|gb|EDM23797.1| uroporphyrinogen-III synthetase [Caminibacter mediatlanticus TB-2]
Length = 213
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 55/202 (27%), Gaps = 13/202 (6%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
P+ F S+ + TS ++ A I I A
Sbjct: 14 VENYPVISFSPLISSIEFDNI---DYLIFTSKNAVRITNAIIDEWKKIPTIAIGKATANE 70
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
K + N + + ++ K ++L K + ++Y+ L I
Sbjct: 71 IKHLGGSVEYQSN-SGYGEELAKEIDKIYKNKTFLWLRPKKVVTNLKEYI--KNNTLIEI 127
Query: 146 DCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAI 205
Y + + L ++F + S+V F + + + +
Sbjct: 128 IVYETICNKPNKK-----LIKPAIVIFTSPSTVKCFSKI--ENFEEIIPIAIGKKTKEVL 180
Query: 206 PASYKNVVTVACFPKETSLLKL 227
+ + + P + L
Sbjct: 181 KQFTSSEIFIPKNPNIKECINL 202
>gi|296273214|ref|YP_003655845.1| uroporphyrinogen III synthase HEM4 [Arcobacter nitrofigilis DSM
7299]
gi|296097388|gb|ADG93338.1| Uroporphyrinogen III synthase HEM4 [Arcobacter nitrofigilis DSM
7299]
Length = 299
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 65/198 (32%), Gaps = 10/198 (5%)
Query: 29 MPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKG 88
+PL + + + L Y A+ +S + + I + + K
Sbjct: 107 IPLFEIKYLEKDIDLR---KYDALVFSSQNGVMAIDKVNSDWKDIPSYVIGKESAKKVKE 163
Query: 89 FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCY 148
+ N N + + V K ++Y+ G + D L ++ I + Y
Sbjct: 164 LGGYINFIANKSNTYEF-TNELVCELKNKKVLYVRGNKITSNISDDLNKNGILSEEVILY 222
Query: 149 YSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
+ I +K +L I+F + S+V YFF S + + P+
Sbjct: 223 ENNYIEPL---VKEVLPKNSKIIFSSPSTVEYFFKTFKWHH-SFKAISIGETTLKYFPS- 277
Query: 209 YKNVVTVACFPKETSLLK 226
+ + +S +K
Sbjct: 278 DIKPIL-SDKASLSSCIK 294
>gi|223995753|ref|XP_002287550.1| uroporphyrinogen III synthase [Thalassiosira pseudonana CCMP1335]
gi|220976666|gb|EED94993.1| uroporphyrinogen III synthase [Thalassiosira pseudonana CCMP1335]
Length = 330
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 76/248 (30%), Gaps = 28/248 (11%)
Query: 3 IVITRPIKKALRTQEKI----------QKMGYIP--VMMPLSYFIHDRESVFLAMQ---Q 47
+ +TR K + ++ + Q G +P ++ L
Sbjct: 67 VALTREEGKNDKLRKALLSNEHIQQLSQSSGVAVDIHEIPCIEHADGPDTDKLVPTLAST 126
Query: 48 SYGAIAITSSESLSTLPANF-----CRHTPIFAIGEASACLARQKGFTQIFHGKD-NSIN 101
+ +AITS E+ L + + + A+G+A+ ++ G F +
Sbjct: 127 QFDYVAITSPEAAKVLVNAWIEAGRPQLGKVAAVGKATQESLKEFGIEVAFVPSKATAAT 186
Query: 102 LAKIIVEQKVLFTPQK--PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
L K + + L Y ++ L E + ++ Y + ++ E
Sbjct: 187 LVKELPLSDAATKEGRSSTLFYPASNKAADTLQNGLEERGFDVMRLNTYDTVPASWDEEQ 246
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPL--PAKISAAFLCLSNNIASAIPASYK--NVVTV 215
Q+A+ F + S+V + A C+ A A + + +
Sbjct: 247 TLL-AQSANVACFASPSAVKAWLKNTDGMNKPARAKAACIGETSAEACRKNQWDESDIFY 305
Query: 216 ACFPKETS 223
P
Sbjct: 306 PEKPGVDG 313
>gi|89889446|ref|ZP_01200957.1| putative uroporphyrinogen-III synthase HemD [Flavobacteria
bacterium BBFL7]
gi|89517719|gb|EAS20375.1| putative uroporphyrinogen-III synthase HemD [Flavobacteria
bacterium BBFL7]
Length = 248
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/194 (9%), Positives = 45/194 (23%), Gaps = 14/194 (7%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGK 96
+ AI +TS S+ F EA A ++ +
Sbjct: 54 IDISKFTAIVLTSRNSVDHFFRVAEEMRYKIPDSLKYFCQSEAVAYYLQKYVVYRKRKIY 113
Query: 97 DNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP 156
+++ K + + + + + + +
Sbjct: 114 VGKRTFKELVPLIKKH--KNEKFLIPSSDKLQDEVPEQMDALGVVWTSGTFFRTVISDLS 171
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTV 215
+ D ++F++ S + F + N +
Sbjct: 172 D----LADVKYDILVFFSPSGIESLFKNFPEFTQDKTRIAVFGNTTMKTAQEMGLRIDIQ 227
Query: 216 ACFPKETSLLKLLP 229
A P+ S+ +
Sbjct: 228 APTPESPSMTMAIE 241
>gi|261392855|emb|CAX50436.1| uroporphyrinogen-III synthase (UROS; uroporphyrinogen-III
cosynthetase; hydroxymethylbilane hydrolyase
[cyclizing]) [Neisseria meningitidis 8013]
Length = 246
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 64/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESLS 61
+I RP +A E ++ + ++ D+ S+ + A+ S ++
Sbjct: 2 LIVRPSGRAKDDVETCRRAEWQAEVLSPIEIETDKASLKRLPEMYARADAVFWVSPTAVE 61
Query: 62 TLPANFCRHTPIFAIGEA---SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I S + + D + + A + +
Sbjct: 62 TAVPYLNLSDGIKMHISVGQGSRRALERCLGRTVIAPDDGNDSEAVLRLPVWNSLPEGAR 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 122 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSAELV 179
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F+ P S + IA A+ V P +
Sbjct: 180 QSLFAQVPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--IPTLEA 226
>gi|73669298|ref|YP_305313.1| uroporphyrinogen-III synthase [Methanosarcina barkeri str. Fusaro]
gi|72396460|gb|AAZ70733.1| uroporphyrinogen-III synthase [Methanosarcina barkeri str. Fusaro]
Length = 263
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 67/257 (26%), Gaps = 37/257 (14%)
Query: 5 ITRPI---KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-----MQQSYGAIAITS 56
I RP +K+ Q G+ P+ +P+ ++ F + S + TS
Sbjct: 11 IMRPESYREKSEALA---QDYGFEPLYVPMIRLEGIKDEGFEPFIRRVLTGSSDYVVFTS 67
Query: 57 SESLSTLPANFC-----------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ +S + + AIG + + G F D S
Sbjct: 68 ANGISFTLDKLSETEKKDFITALKKIKVIAIGPNTEKELIKIGIDNSFLPGDYSSKG--- 124
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA---YPETTMKN 162
IVE K + + L + + Y + +
Sbjct: 125 IVEALCPEVAGKTVDLARSAFGAKVLIEGLEKCGATVYETHVYTLSIPEGTIQKDLIERT 184
Query: 163 LLQNADAILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVV 213
L DA F + V F + A + + + N
Sbjct: 185 LAGEVDAFAFTSSMMVKGFMKHAKGLGAEETIKESLSRAVVGAIGTPTGNTLNKYGVNAN 244
Query: 214 TVACFPKETSLLKLLPL 230
+ +L+K +
Sbjct: 245 VIPEEFTFEALIKAMKK 261
>gi|318056807|ref|ZP_07975530.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces sp. SA3_actG]
gi|318076879|ref|ZP_07984211.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces sp. SA3_actF]
Length = 379
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 66/260 (25%), Gaps = 36/260 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
+ +T ++A +++ G + P + + L + + T+
Sbjct: 23 VAVT-ADRRAEDLLALLRRRGARVLHGPAMRTVPLEDDAELRAVTEELLAHPPHLVIGTT 81
Query: 57 SESLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
+ L A + A G R G T+ + S ++A+
Sbjct: 82 AVGLRGWFAAAEGWGLGAGLSDVLRGARLLARGPKVKGALRGAGLTEEWSPA--SESMAE 139
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ + + F L E + + Y +
Sbjct: 140 VLDHLRTFELRGARVAVQLHGDPLHAFRTALAEAGADVLAVPVYRWLPPEDTAPLDRLTD 199
Query: 165 QNADAIL----FYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYK 210
+ F + + L L + S C+ A+ + A
Sbjct: 200 AVLAGTVDALPFTSAPAALALLDRAETRGLRDQLLAALRESVLVACVGPVTAAPLQALGI 259
Query: 211 NVVTVACFPKETSLLKLLPL 230
V + L+ LL
Sbjct: 260 PTVA-PDRFRLAPLVDLLCR 278
>gi|240168480|ref|ZP_04747139.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium kansasii ATCC 12478]
Length = 380
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/265 (8%), Positives = 55/265 (20%), Gaps = 41/265 (15%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T ++A +++ G P I + L +
Sbjct: 13 RIAVT-SARRADELCALLRRQGAEVCSAPAISMIALPDDDELHRNTQALIADPPDILVAH 71
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKI 105
+ + A + + + +S + ++
Sbjct: 72 TGIGVRGWIAAAEGWGLAGGLIGVLSAARVISRGPKATGELRAAGLREEWSPDSESSLEV 131
Query: 106 IVEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+ K + F L + I Y +
Sbjct: 132 LDYLLRSGVSGKRIAVQLHGAADGWDPFPEFVGGLRSAGAEVVPIRVYRWKPTPLGGEFD 191
Query: 161 KNLL----QNADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIP 206
+ + + DA+ F + + L + +C+ + +
Sbjct: 192 QLVAGIARRQFDAVSFTSAPAAAAVLERGRQLGIEEQLLAALRNDVHAMCVGPVTSRPLA 251
Query: 207 ASYKNVVTVACFPKETSLLKLLPLR 231
V E L L
Sbjct: 252 RKG-----VPTSAPERMRLGALARH 271
>gi|121634572|ref|YP_974817.1| uroporphyrinogen-III synthase [Neisseria meningitidis FAM18]
gi|120866278|emb|CAM10019.1| hypothetical protein NMC0730 [Neisseria meningitidis FAM18]
gi|325131988|gb|EGC54687.1| uroporphyrinogen-III synthase [Neisseria meningitidis M6190]
Length = 250
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 64/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESLS 61
+I RP +A E ++ + ++ D+ S+ + A+ S ++
Sbjct: 6 LIVRPSGRAKDDVETCRRAEWQAEVLSPIEIETDKASLKRLPEMYARADAVFWVSPTAVE 65
Query: 62 TLPANFCRHTPIFAIGEA---SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I S + + D + + A + +
Sbjct: 66 TAVPYLNLSDGIKMHISVGQGSRRALERCLGRTVIAPDDGNDSEAVLRLPVWNSLPEGAR 125
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 126 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSAELV 183
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F+ P S + IA A+ V P +
Sbjct: 184 QSLFAQVPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 230
>gi|312140629|ref|YP_004007965.1| transcriptional regulator [Rhodococcus equi 103S]
gi|325675743|ref|ZP_08155427.1| uroporphyrinogen-III synthase domain protein [Rhodococcus equi ATCC
33707]
gi|311889968|emb|CBH49286.1| putative transcriptional regulator [Rhodococcus equi 103S]
gi|325553714|gb|EGD23392.1| uroporphyrinogen-III synthase domain protein [Rhodococcus equi ATCC
33707]
Length = 389
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 50/234 (21%), Gaps = 35/234 (14%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITSSESLSTLP 64
+A + + G V P I + LA I T+
Sbjct: 24 RADELATLLVRRGADVVHAPAIRIIPLADDTELARVTETIVADPPDVIVATTGIGFRGWM 83
Query: 65 ANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSIN--LAKIIVEQK 110
T I A G + R G + + + S L ++ E
Sbjct: 84 GAAEGWGTGEELLTALGSTRILARGPKATGAVRAAGLREEWSPESESSAEVLEHLLGEGI 143
Query: 111 VLFTPQKPLIYLGGKPRN-FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
L + F L + + Y + +
Sbjct: 144 AGRRIAVQLHGATTEWEPAPDFCAALRAAGAHVIAVPVYRWTPPDDCSAMDRLIESVGCG 203
Query: 170 IL----FYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASY 209
L F + +V L C+ A+ + A
Sbjct: 204 GLDAVSFTSAPAVASILGRAKQTGALEPLLRAFDGRVLAACVGPVTAAPLTALG 257
>gi|258545717|ref|ZP_05705951.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258519034|gb|EEV87893.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 243
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 62/234 (26%), Gaps = 16/234 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL-AMQQSYGAIAITSSESLS 61
++ TR + +I +G + +PL S A+ + TS+ ++
Sbjct: 9 LLYTRDAAHYPAFRARIAALGGSALHLPLMTTRVLPLSATDRAILDHSDVLVFTSAAAVH 68
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
L + + A T NS L P+ I
Sbjct: 69 HLIEQYPLRDQQTVAIGKTTAAALPSPPTITAPAPYNSEALLAYWQ-------PRGMRIA 121
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF 181
L P + + + Y + + L D I ++ ++ +
Sbjct: 122 LIAAPGGREQLAATLNKNNTVHTLYPYRRTNPT---AVWPDALPLPDIITIASQQTLNHL 178
Query: 182 FSLPLPAKISAA-----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
++ K+ +S +A A ET + +
Sbjct: 179 LAIIPQEKLKLLKYRACIAAISARVAQYAQQQGFQQTIFAEDASETRQISAICR 232
>gi|300725864|ref|ZP_07059328.1| uroporphyrinogen-III synthase [Prevotella bryantii B14]
gi|299776852|gb|EFI73398.1| uroporphyrinogen-III synthase [Prevotella bryantii B14]
Length = 249
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 65/243 (26%), Gaps = 19/243 (7%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAI 54
I+I++P + + EK + P F Y A+
Sbjct: 4 KILISQPKPTSEKSPYFDIEK--EFNVKCDFHPFFKVEGLTSKEFRQQKINILDYTAVVF 61
Query: 55 TSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
TS ++ F + E A ++ + + +V
Sbjct: 62 TSRHAIDNFFKLAKDLRVTIPEDMKYFCVIENIAFYIQKYVQYRKRKVFFGNTGKLADLV 121
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
+ +K LI + +N + L + + Y + + E K +
Sbjct: 122 PLMMKHKDEKYLIPMSSAHQNDDVKTLLDSKGLNHKECIMYRTVSNDFTEEEKKAF--DY 179
Query: 168 DAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D +LF++ + V + A + + A + S+
Sbjct: 180 DMLLFFSPTGVKALKKNFPDFEQGDIKIGTFGTTTAQTVGDEGLRLDMQAPTKEHPSMSS 239
Query: 227 LLP 229
L
Sbjct: 240 ALK 242
>gi|86141059|ref|ZP_01059618.1| DNA methylase, putative [Leeuwenhoekiella blandensis MED217]
gi|85833001|gb|EAQ51450.1| DNA methylase, putative [Leeuwenhoekiella blandensis MED217]
Length = 350
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 22/209 (10%)
Query: 22 MGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC----RHTPIFAIG 77
G+ V ++ + TS + F +G
Sbjct: 153 AGFSVVEYDAIQIEFLDVEFPKNLEN----LIFTSKNGVQAFLKMQPDLNTESFSCFCVG 208
Query: 78 EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIE 137
+ +KG + ++ A + + V + + R ++L +
Sbjct: 209 SKTESSLMKKGLNVVKTAQN-----AADLADFIVKNYQNEHFSFFCSTIRRNELPEHLTK 263
Query: 138 HKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCL 197
+++P I CY +Q K Q DA+LF++ S V F ++ + +C+
Sbjct: 264 NQVPFEEIVCYKTQLNT------KEFKQEFDAVLFFSPSGVQSFSAV--NNFKNMLSVCI 315
Query: 198 SNNIASAIPASYKNVVTVACFPKETSLLK 226
N A+ + VTVA S++
Sbjct: 316 GNTTAAEVQQH-TQNVTVANATTIESVIA 343
>gi|149186167|ref|ZP_01864481.1| uroporphyrinogen-III synthetase [Erythrobacter sp. SD-21]
gi|148830198|gb|EDL48635.1| uroporphyrinogen-III synthetase [Erythrobacter sp. SD-21]
Length = 227
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 68/225 (30%), Gaps = 19/225 (8%)
Query: 1 MYIV-ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M + + RP T E +G + L + L + A+ + SS +
Sbjct: 1 MRKLFVFRPEPGLGVTLETAGALGLEALGCALFEVEPVEWT--LPDLEGMDALLVGSSNA 58
Query: 60 LSTLPANFCRHT--PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ P++A+GEA+A AR+KGF GK + + +++ F
Sbjct: 59 FREGGKLLDKLEGLPVYAVGEATAEAAREKGFLVTLTGKGGLQQVLDEVAGRELDFL--- 115
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + I + Y + + K + + L ++ +
Sbjct: 116 -------RLAGEKMVELSPPVGIGMETRVVYRMRPRDISPSVSKEMREEGGVALLHSGEA 168
Query: 178 VLYF---FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
L + + L IA V A P
Sbjct: 169 ALRLIEECERLGIDRTTLTVAALGPRIAEMAG-GGWEAVHTAHAP 212
>gi|71279895|ref|YP_266841.1| uroporphyrinogen-III synthase [Colwellia psychrerythraea 34H]
gi|71145635|gb|AAZ26108.1| uroporphyrinogen-III synthase [Colwellia psychrerythraea 34H]
Length = 253
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 76/245 (31%), Gaps = 17/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD-RESVFLAMQQSYGAIAITSSESL 60
++ITRP KA + + + G + L + + + ++ + S ++
Sbjct: 7 KVLITRPKAKAQQLALLLNQQGILNTSQTLFDYQKNASANDIATALENADILIFVSVAAV 66
Query: 61 STLPANFCRH----TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
A++ IFA+G A+ + G T I + ++ ++
Sbjct: 67 EFAHASYPLPNNLSQTIFAVGNATKKALQAIGMTTILSPPPQQEHSEGLLKLPQLSKVIG 126
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL-LQNADAILFYAR 175
K +I G H + L +R I+ Y P + Q + I+ +
Sbjct: 127 KRIIIFRGNGGREHIANSLTLRGAEVRYIESYQRVWRTLPIIIAEQWRAQKINCIVVTSN 186
Query: 176 SSVLYFFSLPLP--------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL--- 224
+L + ++ +S+ I A V L
Sbjct: 187 DILLALLKYLASTTNSTDNYWQSQCLWVVVSDRIEKNAKALGLKRVINTHGASSQILCNT 246
Query: 225 LKLLP 229
L+ L
Sbjct: 247 LQALS 251
>gi|302551781|ref|ZP_07304123.1| uroporphyrinogen-III synthase [Streptomyces viridochromogenes DSM
40736]
gi|302469399|gb|EFL32492.1| uroporphyrinogen-III synthase [Streptomyces viridochromogenes DSM
40736]
Length = 383
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 58/241 (24%), Gaps = 35/241 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS------YGAIAITSSE 58
+T ++A +Q+ G + P + + L + T++
Sbjct: 20 VT-AARRADELGALLQRRGAAVLHAPALRIVPLADDTELLAATKEIIQQVPDIVVATTAI 78
Query: 59 SLSTLPANFCRHT------------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
I A G R G T+ + S ++A+++
Sbjct: 79 GFRGWVEAADGWGLGDDLLSRLGGARIMARGPKVKGAVRAAGLTEEWSPS--SESMAEVL 136
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ F + L E + + Y + L
Sbjct: 137 DRLLEEGVEGSRIAIQLHGEPLPGFVEALREGGAEVVGVPVYRWMPPEDIGPVDRLLDAM 196
Query: 167 A----DAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNV 212
DA+ F + + S + C+ A + A +
Sbjct: 197 VSRGLDALTFTSAPAAASLLSRAGERGLLPEILAALGHDVLPACVGPVTALPLQAHGVDT 256
Query: 213 V 213
V
Sbjct: 257 V 257
>gi|88801690|ref|ZP_01117218.1| possible uroporphyrinogen-III synthase [Polaribacter irgensii 23-P]
gi|88782348|gb|EAR13525.1| possible uroporphyrinogen-III synthase [Polaribacter irgensii 23-P]
Length = 248
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 56/208 (26%), Gaps = 13/208 (6%)
Query: 32 SYFIHDRESVFLAM---QQSYGAIAITSSESLSTLPANFCRHT---PIFAIGEASACLAR 85
+ + + AI +TS ++ P +
Sbjct: 37 IHVEGIPVKEIRNQKVDFKEFTAIILTSRNAVDYFFKIAEEMRFKVPDDMKYFCQSEAVA 96
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP--LIYLGGKPRNFHFEDYLIEHKIPLR 143
+ + K A+ ++ L K + + L +
Sbjct: 97 YYLQKYVVYRKRKIYVGARTFIDLTKLIKKHKTENFLLPSSDKLKPLVPEELNALGVKWT 156
Query: 144 VIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIA 202
+D Y + + ++++ + ++F++ S + F K + N+
Sbjct: 157 RLDLYRTVVSDLSD--LEDVFYD--VLVFFSPSGIESLFQNFPGFKQNNTRIAAFGNSTV 212
Query: 203 SAIPASYKNVVTVACFPKETSLLKLLPL 230
+A+ + A P S+ L
Sbjct: 213 NAVTEAGLKCDIEAPSPDTPSMTMALDK 240
>gi|294657264|ref|XP_459567.2| DEHA2E05654p [Debaryomyces hansenii CBS767]
gi|199432559|emb|CAG87794.2| DEHA2E05654p [Debaryomyces hansenii]
Length = 264
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 69/241 (28%), Gaps = 26/241 (10%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDR--ESVFLAMQQSYGAI---AITSSESLSTLPANFCR-- 69
+K++ GY PV +PL H +V + + I ITS ++
Sbjct: 19 DKLKASGYNPVFIPLLEHNHYDRHSTVEYLKSKEFSNIRNFIITSQRAVECFNECIQEIN 78
Query: 70 --------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
I + + + G +++ N + + P++ +++
Sbjct: 79 DENIKQSIFQKIGYTVGPATAKILSEAGFKTVKGGNDAGNGSILSKIIIDEIAPEEEIVF 138
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--------NADAILFY 173
GK R L I + Y + T L I+F+
Sbjct: 139 FTGKIRKDIIPKNLKLANINIMERVIYRTDLREDIGETFNKQLSLLDQTNNIEKKWIIFF 198
Query: 174 ARSSVLYFFSLPLP-AKISAAFL--CLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ +++ F + + + V+ P+ SL + +
Sbjct: 199 SPQGTELIIEKLKQLDNLTSQFYIGSIGPTTEDYLVSRGITPNIVSKKPEAASLFESMQN 258
Query: 231 R 231
Sbjct: 259 H 259
>gi|148259147|ref|YP_001233274.1| uroporphyrinogen III synthase HEM4 [Acidiphilium cryptum JF-5]
gi|146400828|gb|ABQ29355.1| Uroporphyrinogen III synthase HEM4 [Acidiphilium cryptum JF-5]
Length = 237
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 19/236 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP T ++ GY+PV+ P A+ I I S+++L
Sbjct: 12 VLVTRPEPGGSATAAALRAAGYVPVLAPCLEIEPLP----GALPTLVDGIVIASTQALPG 67
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
LP R P+FA+G+A+A AR GF + + LA ++ E P L+
Sbjct: 68 LPPAL-RAVPLFAVGDATAARARAAGFIDVASAAGTARELAALLGE---RLDPGARLLLA 123
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLY 180
G + L + Y S+ + + L+ + ++ ++ +S
Sbjct: 124 CGAGHSMDLAADLRGRGFRVTRRVVYRSRPARQLDAAAQAALEAGEIDRVMVFSPASARR 183
Query: 181 FFSLPLPAKISAAFLCLS-------NNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F +L A + A A+ + + A P + ++ +L
Sbjct: 184 FVTLITEAGLDGALA--GAIAVAISPAAAAPLTRLPFRDIRSAVSPDQDHMITILA 237
>gi|256833412|ref|YP_003162139.1| Uroporphyrinogen III synthase HEM4 [Jonesia denitrificans DSM
20603]
gi|256686943|gb|ACV09836.1| Uroporphyrinogen III synthase HEM4 [Jonesia denitrificans DSM
20603]
Length = 372
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/258 (9%), Positives = 59/258 (22%), Gaps = 33/258 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T +++ + ++ G + PL L Q+ + +T
Sbjct: 10 RIAVT-SDRRSADLIDAFERRGAHVIHAPLLKIAPKEHDEELINETRRIINQAPDILIVT 68
Query: 56 SSESLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
++ + G L +
Sbjct: 69 TAYGFRRWIETADAAGLGDELERVLNATRIYVRGPKARGAVRALGFDDCGVSPDERLITL 128
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + L + + Y + LL
Sbjct: 129 ATQLAEHPLTGTRIAVQLHGHDDLTALARLTLAGADVTTVTPYRWTPATDTGDKREQLLT 188
Query: 166 -----NADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYK 210
+ D + F A V FFS + + + A+ + A
Sbjct: 189 ALLNGSIDVLTFTAAPVVDAFFSYVAEQSCTSHILHQLRTVTTVATVGPVTAAPLIAHGI 248
Query: 211 NVVTVACFPKETSLLKLL 228
+ + +++KL+
Sbjct: 249 TP-LIPDRFRMGAMIKLI 265
>gi|218460931|ref|ZP_03501022.1| uroporphyrinogen-III synthase [Rhizobium etli Kim 5]
Length = 182
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/164 (35%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 72 PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHF 131
PIFA+GE +A AR+ GF + N +LA ++ Q V L+YL G+PR F
Sbjct: 24 PIFAVGETTAQAARRLGFRTVTASSGNGRDLADLVGAQSVED-----LLYLAGRPRAETF 78
Query: 132 EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSVLYFFSLPL--- 186
E L E I V +CY +A +K + A+LFY+R + FF L
Sbjct: 79 EGRLRELGIRFSVAECYRMLPVAPGPADIKAIFSGHRLDAVLFYSRQTAEDFFQLAELRS 138
Query: 187 --PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ LCLS +A AIPAS K V ++ P E SLL LL
Sbjct: 139 ALSEQGGIRLLCLSEAVAQAIPASLKETVAISSMPDEISLLSLL 182
>gi|333024865|ref|ZP_08452929.1| putative bifunctional uroporphyrinogen-III synthetase/response
regulator domain protein [Streptomyces sp. Tu6071]
gi|332744717|gb|EGJ75158.1| putative bifunctional uroporphyrinogen-III synthetase/response
regulator domain protein [Streptomyces sp. Tu6071]
Length = 391
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 66/260 (25%), Gaps = 36/260 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
+ +T ++A +++ G + P + + L + + T+
Sbjct: 35 VAVT-ADRRAEDLLALLRRRGARVLHGPAMRTVPLEDDAELRAVTEELLAHPPHLVIGTT 93
Query: 57 SESLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
+ L A + A G R G T+ + S ++A+
Sbjct: 94 AVGLRGWFAAAEGWGLGAELSDVLRGARLLARGPKVKGALRGAGLTEEWSPA--SESMAE 151
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ + + F L E + + Y +
Sbjct: 152 VLDHLRTFELRGARVAVQLHGDPLHAFRTALAEAGADVLAVPVYRWLPPEDTAPLDRLTD 211
Query: 165 QNADAIL----FYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYK 210
+ F + + L L + S C+ A+ + A
Sbjct: 212 AVLAGTVDALPFTSAPAALALLDRAETRGLRDQLLAALRESVLVACVGPVTAAPLQALGI 271
Query: 211 NVVTVACFPKETSLLKLLPL 230
V + L+ LL
Sbjct: 272 PTVA-PERFRLAPLVDLLCR 290
>gi|262375166|ref|ZP_06068400.1| uroporphyrinogen-III synthase [Acinetobacter lwoffii SH145]
gi|262310179|gb|EEY91308.1| uroporphyrinogen-III synthase [Acinetobacter lwoffii SH145]
Length = 259
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 73/229 (31%), Gaps = 23/229 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITS 56
M ++ TRP +A +++Q + +PL S L+ + I + S
Sbjct: 1 MLLINTRPSDRAAGLTQQLQAAQVSVLELPLLELHAMPYSDELSSLYQQLEQAQIIVVVS 60
Query: 57 SESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + A+G+A+ G + S + ++ V
Sbjct: 61 PTAAQIGMQYLQQAGVALSTLAQVHWVAVGKATEQALASYGIHSHVPEVETSEGMLQLPV 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--- 164
+++ + + G+ D+L I + Y Q T + L
Sbjct: 121 LKQLASGSG--VAFWRGEGGRQFMMDHLRASNIKVLNFILYRRQCPETTATILAKNLGLL 178
Query: 165 --QNADAILFYARSSVLYFFSLPLPAKI---SAAFLCLSNNIASAIPAS 208
Q A+L + +S L + +L +L L +A+ +
Sbjct: 179 KTQQRFAVLITSEASWLNWLALMQDDAEFMQHVCYLVLGPRLATILGEY 227
>gi|212550545|ref|YP_002308862.1| uroporphyrinogen-III synthase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548783|dbj|BAG83451.1| uroporphyrinogen-III synthase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 252
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 65/242 (26%), Gaps = 20/242 (8%)
Query: 2 YIVITRPIKKA--LRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAITS 56
+++++P E +K P F Q Y AI T+
Sbjct: 7 KVLVSQPKPATGKSPYYEIAKKYDLQIDFKPFIKIEPISLREFRRQKINIQDYTAIVFTA 66
Query: 57 SESLST-------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVE 108
++ L F + E A ++ + L +I+
Sbjct: 67 KIAIDHYFRLCRELRFQIPESLKYFCLSETIAVYLQKYIVYRKRKIFFSELATLEDLIIA 126
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ + L + I Y + ++ + D
Sbjct: 127 ICKYDK--ENFLIPVSNVHGNGLSSLLNKKNIKCSTAVMYRTV----SNDFNQDEKFDYD 180
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+LF+A + + K + + + A A+ + + A P+ S++
Sbjct: 181 LLLFFAPAGINSLLKNFPDFKRNDVAIGAFGSATAQAVEQAGLRLAIEAPTPEAPSMVTA 240
Query: 228 LP 229
L
Sbjct: 241 LE 242
>gi|151945361|gb|EDN63604.1| uroporphyrinogen III synthase [Saccharomyces cerevisiae YJM789]
Length = 275
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 80/246 (32%), Gaps = 33/246 (13%)
Query: 18 KIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAITSSESLSTLPANFCRH- 70
+ + + P+ +PL H + + I ITS ++ +L
Sbjct: 25 ECRSKAFEPIFVPLIKHTHVIQDFRNVLNTIPNYLNTINYIIITSQRTVESLNEAIIPTL 84
Query: 71 ----------TPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLF---TP 115
++ +G A+A R+ GF + G+D N LA II++ P
Sbjct: 85 TSEQKAALLSKTVYTVGPATANFIRRSGFINVKGGEDAGNGSVLADIIIDDLSTDIKACP 144
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD------- 168
L++L G+ R L I +R + Y +++++ + ++ D
Sbjct: 145 PSELLFLVGEIRRDIIPKKLHSKGIKVREVVTYKTEELSGGFKRFIHAMKECDEDEVFSD 204
Query: 169 AILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++ ++ + + + + V+ P SL
Sbjct: 205 WVVVFSPQGTKEITQYLGDSNRLPGSHLRVASIGPTTKKYLDDNDVTSDVVSPKPDPKSL 264
Query: 225 LKLLPL 230
L + L
Sbjct: 265 LDAIEL 270
>gi|319953182|ref|YP_004164449.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237]
gi|319421842|gb|ADV48951.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237]
Length = 524
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 11/186 (5%)
Query: 42 FLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN 101
LA++ ++ + ITS ++ L A+ F ++ +I N
Sbjct: 344 RLALKATHRNVIITSQNAVEALIASINPDELKFENIYCVGRKTKRLIEKRIGKVTH-FEN 402
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
AK + + V Y R L +HKI L I+ Y ++
Sbjct: 403 SAKELADYLVDSIEGSTATYFCSNLRLDDLPTILADHKIELTEIEAYSTKKSPLKIDDAI 462
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+LFY+ SS+ + C+ + A+ + V ++ P
Sbjct: 463 K------GVLFYSPSSIESYL---QENSTDVIAYCIGDTTAAEAKKH-FSKVHISKMPTL 512
Query: 222 TSLLKL 227
S++ L
Sbjct: 513 ESVIDL 518
>gi|325954899|ref|YP_004238559.1| uroporphyrinogen III synthase HEM4 [Weeksella virosa DSM 16922]
gi|323437517|gb|ADX67981.1| Uroporphyrinogen III synthase HEM4 [Weeksella virosa DSM 16922]
Length = 247
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/246 (8%), Positives = 55/246 (22%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIKK--ALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAI 52
M I++++P + + E + P A+
Sbjct: 1 MRVKSILVSQPKPQNESSPYYELEKNNKIKIDFRPFIQVEGVDAKDVRHQKIDFNRITAV 60
Query: 53 AITSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
TS ++ F EA A ++ + A +
Sbjct: 61 IFTSRNAIDHFFRLAEDLRYTVPDTMKYFCESEAIAFYLQKYIVYRKRKVFTGGKTFADL 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + + + + L KI + + + +
Sbjct: 121 VPL--LKKHKDEKFLLPCSDVMKDEIPNTLNNLKIDWQKGILFRTVSSNLSD----LEDV 174
Query: 166 NADAILFYARSSVLYFFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D ++F+ S + F + + + + + S+
Sbjct: 175 KYDILVFFTPSGIKSLFDNFPDFKQENTRIAAFGKSTVDMAKELGLRIDIEVPTKETPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALEK 240
>gi|313668744|ref|YP_004049028.1| uroporphyrinogen-III synthase HemD [Neisseria lactamica ST-640]
gi|313006206|emb|CBN87668.1| putative uroporphyrinogen-III synthase HemD [Neisseria lactamica
020-06]
Length = 251
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 65/238 (27%), Gaps = 16/238 (6%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E G+ ++ D + L A+ S ++
Sbjct: 9 LIVRPSARAAEDVETCLNAGWRAEVLSPVEIEADAAGLELLSEQYARADAVFWVSPTAIE 68
Query: 62 TLPANFC---RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T A+G+ S + + D + + A + +
Sbjct: 69 TAVPYLNLSDGIKIHIAVGQGSRRALERYLGRTVIAPDDGNDSEAVLRLPVWDSLPEGAR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G L E + + + Y+ + + +N A +
Sbjct: 129 VLFVRGHGGRDFLMGRLREKGLQTELAEVYFRRHKPLNFQNFQA--ENITAAYITSAELA 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
F+ P S + IA A+ V SL L R
Sbjct: 187 RSLFAQLPPQFSRFFKSLLYFTHHPRIAEALKREGAEAVE-----TVPSLEAALSHFR 239
>gi|261401611|ref|ZP_05987736.1| uroporphyrinogen-III synthase [Neisseria lactamica ATCC 23970]
gi|269208314|gb|EEZ74769.1| uroporphyrinogen-III synthase [Neisseria lactamica ATCC 23970]
Length = 251
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 66/238 (27%), Gaps = 16/238 (6%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E G+ ++ D + L A+ S ++
Sbjct: 9 LIVRPSARAAEDVETCLNAGWRAEVLSPVEIEADAAGLELLSEQYARADAVFWVSPTAIE 68
Query: 62 TLPANF---CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T + A+G+ S + + D + + A + +
Sbjct: 69 TAVPHLDLSDGIKIHIAVGQGSRRALERCLGRTVIAPDDGNDSEAVLRLPVWDGLPEGAR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G L E + + + Y+ + + +N A +
Sbjct: 129 VLFVRGHGGRDFLMGRLREKGLQTELAEVYFRRHKPLNFQNFQA--ENITAAYITSAELA 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
F+ P S + IA A+ V SL L R
Sbjct: 187 RSLFAQLPPQFSRFFKSLLYFTHHPRIAEALKREGAEAVE-----TVPSLEAALSHFR 239
>gi|110677860|ref|YP_680867.1| uroporphyrinogen-III synthase, putative [Roseobacter denitrificans
OCh 114]
gi|109453976|gb|ABG30181.1| uroporphyrinogen-III synthase, putative [Roseobacter denitrificans
OCh 114]
Length = 234
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 78/227 (34%), Gaps = 17/227 (7%)
Query: 3 IVITRPIKKAL----RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSE 58
+++TRP K+++ + PL + TS+
Sbjct: 6 LILTRPKGSNAVFEADIAPKVRQH-VDFIHSPLLEIVPIDGGYDS---TGADHAIFTSAN 61
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ P R F +GE + LAR G+ +F G + + ++ PQ
Sbjct: 62 GVKYAPKGNGR--RAFCVGEKTTQLARSHGWDAVFAGATVLA-----LKDHVLINRPQGE 114
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSS 177
+ + G + + L + + I Y + + + + L + A ++ ++ +
Sbjct: 115 IHHYSGVFVRGNVAEDLSVAGLRVTNIPLYEQRLLPFSAQALSVLERRAPVVVPLFSPRT 174
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ F+ PA + +S +A + + +A P S+
Sbjct: 175 AAH-FAAIAPAHPQLYVVAMSTAVADSCNEMSPARLIIAREPTAKSM 220
>gi|284991470|ref|YP_003410024.1| Uroporphyrinogen III synthase HEM4 [Geodermatophilus obscurus DSM
43160]
gi|284064715|gb|ADB75653.1| Uroporphyrinogen III synthase HEM4 [Geodermatophilus obscurus DSM
43160]
Length = 376
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/259 (9%), Positives = 61/259 (23%), Gaps = 37/259 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
+ +T ++ + + G V P + + L + Q + T+
Sbjct: 23 VAVTAARRR-EELGALLARRGARVVYAPAIRIVPLADDTELVAATRQVLAQPVDLVVATT 81
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ-----------IFHGKDNSINLAKI 105
A + + + ++S + +
Sbjct: 82 GVGFRGWLEAADAWDLPLVEHLRGARVLARGPKARGAIRGGGLVDAWSPASESSAEVLEH 141
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
++ + + F + L + + Y E + +
Sbjct: 142 LLAGAEGPLQGRRIAVQLHGDPLPDFVEALRATGAEVVTVPVYRWVLPEDVEPVRRLVRS 201
Query: 166 ----NADAILFYARSSVLYFFSLPLPAKISAAFL----------CLSNNIASAIPASYKN 211
DA+ F + + ++ A + + A + A+
Sbjct: 202 VVTGAVDAVTFTSAPAAASLLTVADELGQRAELIAALTDGVLPVAVGPVTAGPLTAAGIP 261
Query: 212 VVTVACFPKETSLLKLLPL 230
V P E + L L
Sbjct: 262 SV----QP-ERARLGALAR 275
>gi|300783057|ref|YP_003763348.1| uroporphyrinogen-III synthase [Amycolatopsis mediterranei U32]
gi|299792571|gb|ADJ42946.1| uroporphyrinogen-III synthase [Amycolatopsis mediterranei U32]
Length = 269
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/259 (10%), Positives = 61/259 (23%), Gaps = 38/259 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITS 56
I +T ++A +++ G P + L + G +T+
Sbjct: 9 IGVT-AERRAGEFIAALERYGAEVRHAPTITIVPLDADPELRAGTEATLAAPVGFTVVTT 67
Query: 57 SESLSTLPANFCRHTPI----------FAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ +G S + A++
Sbjct: 68 GAGFRGWLDAAEGWELRDRLVAALGESRIYARGPKAVGAVRGAGLRESFSAASESNAELF 127
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----PETTMKN 162
+ + D L+ L + Y +
Sbjct: 128 GALAAAGVRGERVAVQLHGTPLPELTDPLVRAGASLVQVQPYRWHSPPDVTPVHDLIAAI 187
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNV 212
+ DA+ F + + F +L + C+ A+ + A+
Sbjct: 188 VAGELDALAFTSAPAAANFLTLARTSGRYDELLAALRGPLVCACVGPVTAAPLEAAGIET 247
Query: 213 VTVACFPKET---SLLKLL 228
+ P +L+KLL
Sbjct: 248 L----QPDRQRLGALVKLL 262
>gi|296273307|ref|YP_003655938.1| uroporphyrinogen III synthase HEM4 [Arcobacter nitrofigilis DSM
7299]
gi|296097481|gb|ADG93431.1| Uroporphyrinogen III synthase HEM4 [Arcobacter nitrofigilis DSM
7299]
Length = 214
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 59/202 (29%), Gaps = 11/202 (5%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
+P+ + Q Y ++ TS ++ L T + + +
Sbjct: 15 VENLPVFDIEYLD---IRINLQEYDSLIFTSKNAIYALDKASLPWTNLD-SYAIAKKTSD 70
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ + + K ++Y+ G+ + L ++KI + +
Sbjct: 71 ILKKHNSNVVFTGVSSHGDNFAYELIPLLKNKKVLYVKGEKSVSKLFNILKDNKINVEEL 130
Query: 146 DCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAI 205
Y + + I+F + S V FF S + + N A +
Sbjct: 131 IVYKTICNKKD----LKVPALNSIIIFTSPSCVKCFFDKI-VWDESYKAIVIGNTTAKYM 185
Query: 206 PASYKNVVTVACFPKETSLLKL 227
P + + + ++L
Sbjct: 186 PKN--IKYKTSPTQSIEACIEL 205
>gi|158313332|ref|YP_001505840.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Frankia sp. EAN1pec]
gi|158108737|gb|ABW10934.1| Uroporphyrinogen III synthase HEM4 [Frankia sp. EAN1pec]
Length = 383
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/243 (8%), Positives = 49/243 (20%), Gaps = 32/243 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITS 56
+ +T ++ +++ G V P + + L + T+
Sbjct: 19 VALTAARRR-EEFGAALERRGAKVVYAPAIRIVPLADDARLREATERCIAAPVDVVVATT 77
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ A + + E +
Sbjct: 78 GIGFRGWVDAAETWGLADRLVAAFESADLLARGPKARGAIRATGLREAWSPESESSSEVM 137
Query: 117 -----------KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
K + L + I Y + +
Sbjct: 138 SYLTAHGGLDGKRIAVQLHGEPLPDMVQTLCAAGAEVIEIPVYRWVPAQDMAPVRRVVEC 197
Query: 166 ----NADAILFYARSSVLYFFSLPLPAKISAA----------FLCLSNNIASAIPASYKN 211
+ DA+ F + + F + +A C+ A+ + +
Sbjct: 198 VAARSLDAVAFTSAPAAASFLQTADEMALRSAAAEAMRGPVVAACVGPVTAAPLGRAGIP 257
Query: 212 VVT 214
V
Sbjct: 258 CVI 260
>gi|162139948|ref|YP_255447.2| hypothetical protein Saci_0781 [Sulfolobus acidocaldarius DSM 639]
Length = 220
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 71/231 (30%), Gaps = 21/231 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP R + +P+ + + I TS +
Sbjct: 1 MKILLLRPE--NSRIPVL---NNVEIINIPIFEIRCVKYDNEI--LNQIDGIGFTSVNGV 53
Query: 61 STLPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
R + I+A+G ++A KGF + +++ + + P+
Sbjct: 54 MCFKDFDRIRLSKIYAVGRSTAMAIMNKGFPDVKVPT---EFTVNSMIQLMLNDGLKNPV 110
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ E + + Y + I + K+L++ + SS
Sbjct: 111 VVRSKVGYERD-----RELIRNVVFLVDYDLEVIEHNLERAKSLIKECRVDIVVVTSS-- 163
Query: 180 YFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
SL + + + + +SA+ N + A +L ++
Sbjct: 164 KIASLIKDSISNCIKIVSIGPITSSALE--GVNNIYEAKQHDINGVLNIIS 212
>gi|304387913|ref|ZP_07370086.1| uroporphyrinogen-III synthase [Neisseria meningitidis ATCC 13091]
gi|304338010|gb|EFM04147.1| uroporphyrinogen-III synthase [Neisseria meningitidis ATCC 13091]
Length = 250
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 65/224 (29%), Gaps = 11/224 (4%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESLS 61
+I RP +A E ++ G+ ++ D S+ + A+ S ++
Sbjct: 6 LIVRPSGRAKDDVEICRRTGWQAEVLSPIEIETDEASLKRLPEMYARADAVFWVSPTAVE 65
Query: 62 TLPANFC---RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T A+G+ S + + D + + A + +
Sbjct: 66 TAVPYLNLSDGIKMHIAVGQGSRRALERCLVRTVIAPDDGNDSEAVLRLPVWNSLPEGAR 125
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 126 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKLLNFQNFQT--ENIAAAYITSTELV 183
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACF 218
F+ P S + IA A+ V
Sbjct: 184 QSLFAQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVETVPT 227
>gi|326402300|ref|YP_004282381.1| putative uroporphyrinogen III synthase [Acidiphilium multivorum
AIU301]
gi|325049161|dbj|BAJ79499.1| putative uroporphyrinogen III synthase [Acidiphilium multivorum
AIU301]
Length = 259
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 19/236 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP T ++ GY+PV+ P A+ I I S+++L
Sbjct: 34 VLVTRPEPGGSATAAALRAAGYVPVLAPCLEIEPLP----GALPTLVDGIVIASTQALPG 89
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
LP R P+FA+G+A+A AR GF + + LA ++ E P L+
Sbjct: 90 LPPAL-RAVPLFAVGDATAARARAAGFIDVASAAGTARELAALLGE---RLAPGARLLLA 145
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLY 180
G + L + Y S+ + + L+ + ++ ++ +S
Sbjct: 146 CGAGHSMDLAADLRGRGFRVTRRVVYRSRPARQLDAAAQAALEAGEIDRVMVFSPASARR 205
Query: 181 FFSLPLPAKISAAFLCLS-------NNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F +L A + A A+ + + A P + ++ +L
Sbjct: 206 FVTLITEAGLDGALA--GAIAVAISPAAAAPLTRLPFRDIRSAVSPDQDHMITILA 259
>gi|303236113|ref|ZP_07322715.1| uroporphyrinogen-III synthase [Prevotella disiens FB035-09AN]
gi|302483695|gb|EFL46688.1| uroporphyrinogen-III synthase [Prevotella disiens FB035-09AN]
Length = 251
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 59/243 (24%), Gaps = 22/243 (9%)
Query: 2 YIVITRPIKKAL-----RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIA 53
I+I++P + ++ V P F Y A+
Sbjct: 4 KILISQPKPGSEKSPYYDIAKEFN---VDMVFRPFFKVEGLSSKEFRQQKVNLLEYTAVV 60
Query: 54 ITSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
TS ++ F + E A ++ + + +
Sbjct: 61 FTSRHAIDNYFKLAQEMRITIPETMKYFCVIETIALYIQKYTQYRKRKIFFGNSGKIDSL 120
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ V + + L HK+ + Y + E + +
Sbjct: 121 IPTMVKHKD-EKYLVPMSSVHTDSISSLLTAHKLKYKECVMYRTVTNDLTEE--EKKNFD 177
Query: 167 ADAILFYARSSVLYFFSLPLPA-KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F++ + V + A + + A K S+
Sbjct: 178 YDMLVFFSPTGVSSLKKNLPDFVQGDIKIAAFGPATAKEVINQGLRLDLEAPSDKYPSMT 237
Query: 226 KLL 228
L
Sbjct: 238 AAL 240
>gi|254458813|ref|ZP_05072237.1| uroporphyrinogen-III synthase [Campylobacterales bacterium GD 1]
gi|207084579|gb|EDZ61867.1| uroporphyrinogen-III synthase [Campylobacterales bacterium GD 1]
Length = 213
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 61/198 (30%), Gaps = 16/198 (8%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT---PIFAIGEASACLARQKG 88
+ + Y + ITS +++ L + +A G
Sbjct: 22 LEVRFLKPQID---FTKYDYLIITSKQTVKALEQYKKEEFINIQALCVSVKTAASYENFG 78
Query: 89 FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCY 148
+ G NL K I E+ + K +YL + F + + Y
Sbjct: 79 GKILEIGDGYGDNLVKNIKEK----SKDKKWLYLRAEFIASDFVERCQNDGYDIDEEILY 134
Query: 149 YSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
S+ M+ ++ ++F + SS+ F + A + + A+++P
Sbjct: 135 VSEC---SNEGMEVDVKENSILIFTSPSSIECFLK-THTIGLDAKVVVIGRTTAASLPD- 189
Query: 209 YKNVVTVACFPKETSLLK 226
++ S ++
Sbjct: 190 GIEC-KISEKTSIESCME 206
>gi|238923293|ref|YP_002936808.1| porphyrin biosynthesis protein [Eubacterium rectale ATCC 33656]
gi|238874967|gb|ACR74674.1| porphyrin biosynthesis protein [Eubacterium rectale ATCC 33656]
Length = 521
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 66/257 (25%), Gaps = 38/257 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP 64
IT P K K+Q++G + F+ +S I TS + +
Sbjct: 258 ITVPYIKTNELIAKLQQLGADITPVKTGIIKPVIIPKFVDKVRSADWIVFTSKNGVRSFF 317
Query: 65 ANFC---------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV---- 111
N + +G+A+ + + + ++ +
Sbjct: 318 YNLDLAGADIRLIANARFAVVGKATEKELVKHHINADIIPAEQTGKGLADAMKLCMPYAY 377
Query: 112 ----------------------LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
+ + K + E L E ++
Sbjct: 378 GVSDEDTFDLGKNSTLDLSNDNISDKMCKVCIFSAKEASPDLEAGLKEICELEKIDAYVN 437
Query: 150 SQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASY 209
Q ++ N++ +F + S+V FF + + +A+
Sbjct: 438 EQAYEGIPESIGNMVSE---AVFTSASNVERFFHMLPENAYVETAYSIGEKTTAALEQHN 494
Query: 210 KNVVTVACFPKETSLLK 226
+ A +L+
Sbjct: 495 VREIVQADDSSYEALVD 511
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 25/83 (30%), Gaps = 6/83 (7%)
Query: 154 AYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLC------LSNNIASAIPA 207
+ +++AD I+F +++ V FF A + + +
Sbjct: 289 PVIIPKFVDKVRSADWIVFTSKNGVRSFFYNLDLAGADIRLIANARFAVVGKATEKELVK 348
Query: 208 SYKNVVTVACFPKETSLLKLLPL 230
+ N + L + L
Sbjct: 349 HHINADIIPAEQTGKGLADAMKL 371
>gi|330824251|ref|YP_004387554.1| uroporphyrinogen-III synthase [Alicycliphilus denitrificans K601]
gi|329309623|gb|AEB84038.1| uroporphyrinogen-III synthase [Alicycliphilus denitrificans K601]
Length = 274
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 68/263 (25%), Gaps = 41/263 (15%)
Query: 4 VITRPIKKALRTQEKIQKMGYI----------PVMMPLSYFIHDRESVFLAMQQSYGAIA 53
++TRP ++A + +Q G V P + A SY A+
Sbjct: 11 IVTRPAREAAQWVTDLQAHGIAAAALPLIAIGAVADPALR---EALQRARARLGSYRAVM 67
Query: 54 ITSSESLSTLPANFCR-----------HTPIFAIGEASACLARQKGFTQIFH----GKDN 98
S ++ +T ++A G + RQ G
Sbjct: 68 FVSGNAVQYFFEENQAPGLSQKALAAINTRVWAPGPGTVAALRQTGLPASRIDAPGADAA 127
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLG--------GKPRNFHFEDYLIEHKIPLRVIDCYYS 150
+ + +P ++ + G + + + Y
Sbjct: 128 QFDSEALWQVVAPQISPGDRVLVVRGSSAPAAEGGNGREWLAGQISAAGGAVDFVAAYER 187
Query: 151 QDIAYPETTM---KNLLQNADAILFYARSSVLYF-FSLPLPAKISAAFLCLSNNIASAIP 206
+ + + L + +V + +LP A L IA A
Sbjct: 188 RAPRLDAAGQALARTAAGDGSLWLLSSSEAVTHLAAALPGQDWSRARALATHPRIAQAAR 247
Query: 207 ASYKNVVTVACFPKETSLLKLLP 229
A+ V P ++ +
Sbjct: 248 AAGFGTVLEC-RPSFAEVVASIE 269
>gi|312888384|ref|ZP_07747960.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603]
gi|311299218|gb|EFQ76311.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603]
Length = 526
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/227 (11%), Positives = 65/227 (28%), Gaps = 13/227 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+ I+R + + + I+K+G L + + + ++ I +S ++
Sbjct: 306 VFISRELSEQSYFRRAIEKLGMEVEARSLIRTVPVITKLDPYILRNADWIFFSSKNAVEY 365
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
G + F + + +++
Sbjct: 366 FFELKPAFPKKVKFGVMGSGSEDTLRRCGHFADYTGEGIDTADVAQAFAKLAEGSTVLFP 425
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFF 182
G + + L + + Y + + E NAD ++F + S+V +F
Sbjct: 426 GAEASMRSIQQGLSADTKIIDLPV-YETVLLDEVEP------TNADILVFTSPSNVDAYF 478
Query: 183 --SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+L P + + + + + P E L +
Sbjct: 479 VDNLLQP---NQKIIAIGKSTGKKFDEMGIQ-YKLPFSPDEIGLAEA 521
Score = 37.1 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 47/171 (27%), Gaps = 4/171 (2%)
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNS-INLAKIIVEQKVLFTPQ-KPL 119
LP ++ +GF + + ++ LA IV K +
Sbjct: 247 HLPLGCYCRKRDNVFQVFTSKADDAEGFPDRLYLEADTTEGLANKIVSYFDKDRQFFKSV 306
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+F + + + + + + L+NAD I F ++++V
Sbjct: 307 FISRELSEQSYFRRAIEKLGMEVEARSLIRTVPVITKLDPYI--LRNADWIFFSSKNAVE 364
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
YFF L F + + + + +
Sbjct: 365 YFFELKPAFPKKVKFGVMGSGSEDTLRRCGHFADYTGEGIDTADVAQAFAK 415
>gi|293604317|ref|ZP_06686724.1| uroporphyrinogen-III synthase [Achromobacter piechaudii ATCC 43553]
gi|292817194|gb|EFF76268.1| uroporphyrinogen-III synthase [Achromobacter piechaudii ATCC 43553]
Length = 266
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 58/249 (23%), Gaps = 33/249 (13%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESLST 62
V+TRP + ++ G+ ++P L + + S +
Sbjct: 9 VLTRPEGRNEALAGRLADAGWAARILPALEIHSLDVPAAQLPRPADFDMVVFVSGNAAKQ 68
Query: 63 LPANFCRHT---------------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
P A S + +
Sbjct: 69 YLGQLAAAHGAAPWPDGVIAATVGPASAQALRELAAFGANTTVLHPGDDAPSHDSEALWA 128
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
L ++ + G D L H + + Y + + T++ L A
Sbjct: 129 VLGRLPALPGRVLLVRGTQGRDWLGDQLQAHGVAVTRHAAYLRRPAVWDAETLEALRGWA 188
Query: 168 DA-----ILFYARSSVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVAC 217
DA L + + F+ ++A +P +
Sbjct: 189 DAGIFATWLITSGEGADAVRANLEDAGMASWWRQCRFVLTHPSLARRVPPA-------CD 241
Query: 218 FPKETSLLK 226
+++K
Sbjct: 242 GASAPAMVK 250
>gi|239947345|ref|ZP_04699098.1| uroporphyrinogen-III synthase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921621|gb|EER21645.1| uroporphyrinogen-III synthase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 224
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 80/237 (33%), Gaps = 27/237 (11%)
Query: 1 MY-IVITRPIKKALRTQEKIQK--MGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ ++I K + + PL + ++ + +Y I ITS
Sbjct: 1 MKSVLLTRNIEENNEPIKEISKSNLDLRYIHCPLIKYKTLDFNIDI--LDNYSNIIITSK 58
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ + L + + ++ L ++ + + +++ ++
Sbjct: 59 YAANILAGHNLKQDVWVVGSKSKRLLGKK---------VIYTAKNVEDLIKHFPPDLYEQ 109
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + + + P + +K N D IL Y+++S
Sbjct: 110 TIYLSSNEITKDLPNKIARHIIYNVEYL-------NELPLSIIKEFKSNIDFILLYSQNS 162
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F L L + + + +S +A+ + + V ++KLL
Sbjct: 163 AKTFVRLLLQNNLLEYLQDSLVVAISLKVANIVR-PFIKNVVYCDDQNPNDVIKLLS 218
>gi|288928866|ref|ZP_06422712.1| uroporphyrinogen-III synthase [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329850|gb|EFC68435.1| uroporphyrinogen-III synthase [Prevotella sp. oral taxon 317 str.
F0108]
Length = 248
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 63/242 (26%), Gaps = 18/242 (7%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAI 54
I+I++P + + E ++ G V P F +Y AI
Sbjct: 4 KILISQPKPTSDKSPYFDIE--REYGVDLVFRPFVQVEGITSKEFRQQKVSIPNYTAIVF 61
Query: 55 TSSESLSTLPA------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
TS ++ T + + L QK +
Sbjct: 62 TSRHAIDHFFKLAKELRVPIPETLKYFCVTETIALYIQKYVQYRKRKVFFGTTGKMEDLL 121
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ Q+ + N L K+ Y + + +KN + D
Sbjct: 122 PTMAKHKQEKYLVPLSDNHNDDIAKLLDSKKLNHTECVMYRTITNDFTPEEIKNF--DYD 179
Query: 169 AILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
++F + + V F + + AI + A + S+
Sbjct: 180 MLIFVSPTGVKSFVKDFPNFEQGDVRIGTFGPATSKAITDEGLRLDFQAPSKEYPSMSGA 239
Query: 228 LP 229
L
Sbjct: 240 LK 241
>gi|90421074|ref|ZP_01228977.1| putative uroporphyrinogen-III synthase [Aurantimonas manganoxydans
SI85-9A1]
gi|90334709|gb|EAS48486.1| putative uroporphyrinogen-III synthase [Aurantimonas manganoxydans
SI85-9A1]
Length = 229
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 12/232 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
+I R A++T E + G+ P+++P+ R A + A+A TS ++ L
Sbjct: 2 LILRAADAAVQTAEALAARGHRPLVLPV---ESMRTIGGPAPTGDFAALAATSMRAVPAL 58
Query: 64 PANFC-RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
F P+FA+GE + GFT + + ++A++ + ++Y
Sbjct: 59 AKVFSGDGRPVFAVGERTGSALLAAGFTDVRVAAGEAEDIARL--ARDAGLGETATILYA 116
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSVLY 180
G+PR E L I V + Y + + + +L DA+L +
Sbjct: 117 AGRPRTGTLETALTAAGIGCHVWEVYETVAHRPERSAVAAVLDEGPPDAVLLLSAGQATA 176
Query: 181 FFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ L + + L LS IA+A+PA+ V ++ + SL + L
Sbjct: 177 YGELVATCPDLFQPAPKILALSARIAAALPANLAETVRLSDDTRLASLFERL 228
>gi|269214006|ref|ZP_05983380.2| uroporphyrinogen-III synthase [Neisseria cinerea ATCC 14685]
gi|269144787|gb|EEZ71205.1| uroporphyrinogen-III synthase [Neisseria cinerea ATCC 14685]
Length = 240
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 62/224 (27%), Gaps = 11/224 (4%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E G+ ++ D + L A+ S ++
Sbjct: 9 LIIRPSARAAEDVETCLNAGWRAEVLSPVEIEADAAGLELLSEQYARADAVFWVSPTAIE 68
Query: 62 TLPANF---CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T A+G+ S + + D + + A + +
Sbjct: 69 TAVPYLDLSDGIKIHIAVGQGSRRALERYLGRTVIAPHDGNDSEAVLRLPVWDGLREGGR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G L E + + + Y+ + + +N A + V
Sbjct: 129 VLFVRGHGGRDFLMRRLREKGLQTELAEIYFRRHNPLNFQNFQA--ENITAAYITSTELV 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACF 218
F+ P S + IA A+ V
Sbjct: 187 QSLFAQVPPQFSRFFKSLLYFTHHPRIAEALKREGVRSVETVPS 230
>gi|208779643|ref|ZP_03246988.1| hypothetical protein FTG_0895 [Francisella novicida FTG]
gi|254374765|ref|ZP_04990246.1| hypothetical protein FTDG_00940 [Francisella novicida GA99-3548]
gi|151572484|gb|EDN38138.1| hypothetical protein FTDG_00940 [Francisella novicida GA99-3548]
gi|208744604|gb|EDZ90903.1| hypothetical protein FTG_0895 [Francisella novicida FTG]
Length = 249
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 11/161 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A+ EK+ G + V +P + + + + Y ++ TS ++
Sbjct: 1 MKILVCRPQNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVL---DYTSLVFTSKYAV 57
Query: 61 STLPAN----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L + ++ I+++G ++A + + I+ + S L II+ Q +
Sbjct: 58 ESLFSQYPIDLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ + G + + Y I E
Sbjct: 118 AIISGVSGN----DLLLEELSKLTHCDKFETYSRVFIDLDE 154
>gi|254373302|ref|ZP_04988790.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
novicida GA99-3549]
gi|151571028|gb|EDN36682.1| uroporphyrinogen III synthase [Francisella novicida GA99-3549]
Length = 249
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 11/161 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A+ EK+ G + V +P + + + + Y ++ TS ++
Sbjct: 1 MKILVCRPQNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVL---DYTSLVFTSKYAV 57
Query: 61 STLPAN----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L + ++ I+++G ++A + + I+ + S L II+ Q +
Sbjct: 58 ESLFSQYPIDLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ + G + + Y I E
Sbjct: 118 AIISGVSGN----DLLLEELSKLTHCDKFETYSRVFIDLDE 154
>gi|254669890|emb|CBA04390.1| Uroporphyrinogen-III synthase [Neisseria meningitidis alpha153]
Length = 253
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 64/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E G+ ++ D + L A+ S ++
Sbjct: 9 LIVRPSGRAAEDVETCLNAGWRAEVLSPVEIEADAAGLELLSEQYARADAVFWVSPTAVE 68
Query: 62 TLPANFC---RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T A+G+ S + + D + + A + +
Sbjct: 69 TAVPYLNLSDGIKMHIAVGKGSRRALERCLGRTVIAPDDGNDSEAVLRLPVWNSLPEGAR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E + + + Y+ + + +N A + V
Sbjct: 129 VLFVRGHGGRDFLMNALQEKGLRTEMAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 187 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 233
>gi|325133709|gb|EGC56365.1| uroporphyrinogen-III synthase [Neisseria meningitidis M13399]
Length = 246
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 62/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E G+ ++ D + L A+ S ++
Sbjct: 2 LIVRPSGRAAEDVETCLNAGWRAEVLSPVEIEADAAGLELLSEQYARADAVFWVSPTAVE 61
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I A + S + + D + + A + +
Sbjct: 62 TAVPYLNLSDGIKAQIAVGQGSRRALERCLVRTVIAPDDGNDSEAVLRLPVWNSLPEGAR 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E + + Y+ + + +N A + V
Sbjct: 122 VLFVRGHGGRDFLMNALQEKGFRTEMAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 179
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 180 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 226
>gi|15676675|ref|NP_273819.1| uroporphyrinogen-III synthase [Neisseria meningitidis MC58]
gi|7226008|gb|AAF41190.1| putative uroporphyrinogen-III synthase HemD [Neisseria meningitidis
MC58]
gi|316983764|gb|EFV62745.1| uroporphyrinogen-III synthase [Neisseria meningitidis H44/76]
gi|325200537|gb|ADY95992.1| uroporphyrinogen-III synthase [Neisseria meningitidis H44/76]
Length = 246
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 62/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E G+ ++ D + L A+ S ++
Sbjct: 2 LIVRPSGRAAEDVETCLNAGWRAEVLSPVEIEADAAGLELLSEQYARADAVFWVSPTAVE 61
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I A + S + + D + + A + +
Sbjct: 62 TAVPYLNLSDGIKAQIAVGQGSRRALERCLVRTVIAPDDGNDSEAVLRLPVWNSLPEGAR 121
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 122 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 179
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 180 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 226
>gi|254820412|ref|ZP_05225413.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium intracellulare ATCC 13950]
Length = 387
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/266 (8%), Positives = 54/266 (20%), Gaps = 43/266 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T +A +++ G I E L + +
Sbjct: 17 RIAVT-SANRAEELCALLRRNGAEVSSAAAINLIALPEDEELHRHTEAVIAEPPDILVAH 75
Query: 56 SSESLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A + + + S + +++
Sbjct: 76 TGIGFRGWVAAADGWGLATQLLASLSRARIVARGPKATGALRAAGLHEEWSPRSESSSEV 135
Query: 106 IVEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIA----YP 156
+ K + F + L + I Y + +
Sbjct: 136 LRYLLESDVAGKRVAVQLHGAADTWDPFPEFLNGLRSAGAQVVPIHVYRWKPTPAGGDFD 195
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIP 206
+ + DA+ F + + L + +C+ A +
Sbjct: 196 QLVTSVARRQFDAVTFTSAPAGAALLERSRELGVEEQLLQALRSDVHAMCVGPVTAQPLL 255
Query: 207 ASYKNVVTVACFPKETSL-LKLLPLR 231
+ + L L
Sbjct: 256 RAGV------PTSSPERMRLGALARH 275
>gi|118472313|ref|YP_884845.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium smegmatis str. MC2 155]
gi|118173600|gb|ABK74496.1| uroporphyrinogen-III synthetase [Mycobacterium smegmatis str. MC2
155]
Length = 385
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/266 (8%), Positives = 55/266 (20%), Gaps = 43/266 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAIT 55
+ +T ++A +++ G P + + L + + T
Sbjct: 13 RVAVT-SARRADELCALLRRRGATVTSAPAITMVPLPDDDELRAHTESLITDPPDIVVAT 71
Query: 56 SSESLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ L A + + +S + ++
Sbjct: 72 TGIGLRGWIAAADGWGLAGELTEALGKARIVSRGPKATGALRAAGLPEEWSPDSESSREV 131
Query: 106 IVEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+ + + F D L + I Y
Sbjct: 132 VRYLVEHGVDGRRIAVQLHGATDDWDPFPEFLDELRVAGAEVVPIRVYRWHPAPPGGEFD 191
Query: 161 KNLL----QNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIP 206
+ + + DA+ F + +V + +C+ A +
Sbjct: 192 QLVAGIAERRFDAVSFTSAPAVASVLMRATELGLTEQVVSALRTDVHAMCVGPVTARPLV 251
Query: 207 ASYKNVVTVACFPKETSL-LKLLPLR 231
+ L L
Sbjct: 252 RLGI------PTSAPERMRLGALARH 271
>gi|21221403|ref|NP_627182.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces coelicolor A3(2)]
gi|6911988|emb|CAB72204.1| putative transcriptional regulator [Streptomyces coelicolor A3(2)]
Length = 395
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/239 (9%), Positives = 59/239 (24%), Gaps = 31/239 (12%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSE 58
+T ++A + + G + P + + L + ++ + T++
Sbjct: 32 VT-AARRADELGALLGRRGATVLHAPALRIVPLADDGELMAATKRIVDRAPDVVVATTAI 90
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVE 108
A+ E + + S ++A+++
Sbjct: 91 GFRGWVEAADGWGLGDALLERLRTVELLARGPKVKGAVRAAGLTERWSPASESMAEVLDR 150
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----NLL 164
+ + F + L E + + Y + +
Sbjct: 151 LLEQGVAGRRIAVQLHGEPLPGFVEALREGGAEVVGVPVYRWLPPEDLGPVDRLLDAAVS 210
Query: 165 QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ DA+ F + + + L C+ A + A + V
Sbjct: 211 RGVDAVTFTSAPAAVSLLGRAEERGLLPELLAAFGHDVLPACVGPVTAVPLQAHGVDTV 269
>gi|157825834|ref|YP_001493554.1| hypothetical protein A1C_03865 [Rickettsia akari str. Hartford]
gi|157799792|gb|ABV75046.1| hypothetical protein A1C_03865 [Rickettsia akari str. Hartford]
Length = 224
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 82/236 (34%), Gaps = 27/236 (11%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYI--PVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ +T +KI K + PL + +++ +Y I ITS
Sbjct: 1 MKSVLLTRNIEENNKTIKKISKYNLDLRYIHCPLIKYATLDFNIY--SLDNYSNIIITSK 58
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
S + L + ++ L ++ +T +++ ++
Sbjct: 59 YSANILVGYNLKQDIWVVGSKSKRLLGKKVIYTAKNVAD---------LIKHFPPDLYEQ 109
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + + + P + +K L +N D IL Y+++S
Sbjct: 110 TIYLSSNEITKDLPNKIARHIIYNVEYL-------NELPISIIKELEKNIDFILLYSQNS 162
Query: 178 VLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
F L L + + + +S +A+ + + V ++KLL
Sbjct: 163 AKTFIRLLLQNNLLTYLQDSLVVAISLKVANIVR-PFIKNVVYCDDRNPNDIIKLL 217
>gi|326335840|ref|ZP_08202019.1| uroporphyrinogen-III synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691984|gb|EGD33944.1| uroporphyrinogen-III synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 247
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 69/245 (28%), Gaps = 21/245 (8%)
Query: 1 MY---IVITRPIK-KALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M I++++P + + + I+K P + Q++ AI
Sbjct: 1 MKVKTILVSQPEQSENSPYHQIIEKYKVKIDFRPFTEVQGVTGKDLRTQKIELQNHTAII 60
Query: 54 ITSSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+TS ++ F + EA A ++ + + A +I
Sbjct: 61 LTSRNAVDHFFRVAEEMRFKVPDMMRYFCLSEAVAFYLQKYITYRKRKIYVGKKDFADLI 120
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ ++ + + + E L + KI + + +
Sbjct: 121 --PFLKKHKEEKFFFPTSEVLSPTIEKSLNDLKIEWKRGILFRTAH----ADITDLKDVK 174
Query: 167 ADAILFYARSSVLYFFSLPLPAKISA-AFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D I F++ + V F K + + + A P+ S+
Sbjct: 175 YDVIAFFSPAGVESLFKNFSDFKQGTTRIAVFGASTLKTAEEAGLRIDIQAPLPETPSMT 234
Query: 226 KLLPL 230
L
Sbjct: 235 MALEK 239
>gi|41409804|ref|NP_962640.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain-containing protein [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398636|gb|AAS06256.1| hypothetical protein MAP_3706c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 383
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/266 (8%), Positives = 53/266 (19%), Gaps = 43/266 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T +A +++ G I E L Q +
Sbjct: 13 RIAVT-SANRAEELCALLRRNGAEVTSAAAINIIALPEDQELHRHTEAVIAQPPDILVAH 71
Query: 56 SSESLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A + + + S + ++
Sbjct: 72 TGIGFRGWVAAADGWGLAPQLLSALSQARIVARGPKATGALRAAGLHEEWSPKSESSREV 131
Query: 106 IVEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+ K + F + L + I Y +
Sbjct: 132 LRYLLDSGVAGKRIAVQLHGAADGWDPFPEFINGLRSAGAQVMPIHVYRWKPTPAGGEFD 191
Query: 161 KNLL----QNADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIP 206
+ + + DA+ F + + L + +C+ A +
Sbjct: 192 QLVASVARRQFDAVTFTSAPAGAALLERSRELGIEDQLLQALRSDVHAMCVGPVTAQPLI 251
Query: 207 ASYKNVVTVACFPKETSL-LKLLPLR 231
+ + L L
Sbjct: 252 RAGV------PTSSPERMRLGALARH 271
>gi|228473002|ref|ZP_04057759.1| uroporphyrinogen-III synthase [Capnocytophaga gingivalis ATCC
33624]
gi|228275584|gb|EEK14361.1| uroporphyrinogen-III synthase [Capnocytophaga gingivalis ATCC
33624]
Length = 247
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 68/245 (27%), Gaps = 21/245 (8%)
Query: 1 MY---IVITRPIK-KALRTQEKIQKMGYIPVMMPLSYFIHD---RESVFLAMQQSYGAIA 53
M I++++P + + + I+K P + Q + AI
Sbjct: 1 MKVKTILVSQPEQSENSPYHQIIEKYKVKIDFRPFTEVQGVTGKDLRAQKIELQQHTAII 60
Query: 54 ITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+TS ++ F + EA A ++ + + A +I
Sbjct: 61 LTSRNAVDHFFRVAEEMRFKVPDTMRYFCLSEAVAFYLQKYITYRKRKIYVGKKDFADLI 120
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ ++ + + + E L + KI + + +
Sbjct: 121 --PFLKKHKEEKFFFPTSELLSPAIEKSLNDLKINWKRGILFKTAH----ADITDLKDVK 174
Query: 167 ADAILFYARSSVLYFFSLPLPAKISA-AFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D I F++ + V F K + + + A P+ S+
Sbjct: 175 YDVIAFFSPAGVESLFQNFSDFKQGTTRVAVFGASTLKTAEEAGLRIDIQAPLPETPSMT 234
Query: 226 KLLPL 230
L
Sbjct: 235 MALEK 239
>gi|86134688|ref|ZP_01053270.1| Uroporphyrinogen-III synthase [Polaribacter sp. MED152]
gi|85821551|gb|EAQ42698.1| Uroporphyrinogen-III synthase [Polaribacter sp. MED152]
Length = 248
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/193 (11%), Positives = 53/193 (27%), Gaps = 10/193 (5%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNSI 100
+ AI +TS ++ P + + + K
Sbjct: 52 IDLSKFTAIILTSRNAVDHFFRIAEEMRFKVPDSMKYFCQSEAVAYYLQKYVVYRKRKIY 111
Query: 101 NLAKIIVEQKVLFTPQK--PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
A+ E L K + L + I +D Y + +
Sbjct: 112 VGARTFPELTKLIKKHKTEKFLLPSSDKLKPLIPAELDKLGIAWTRVDLYRTVVSDLSD- 170
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVAC 217
++++ + ++F++ S + K + N+ +A+ + VA
Sbjct: 171 -LEDVFYD--ILVFFSPSGIESLLKNFPDFKQNNTRIAAFGNSTVNAVTTAGFKCDIVAP 227
Query: 218 FPKETSLLKLLPL 230
+ S+ L
Sbjct: 228 SKETPSMTMALEK 240
>gi|254777340|ref|ZP_05218856.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium avium subsp. avium ATCC
25291]
Length = 387
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/266 (8%), Positives = 53/266 (19%), Gaps = 43/266 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T +A +++ G I E L Q +
Sbjct: 17 RIAVT-SANRAEELCALLRRNGAEVTSAAAINIIALPEDQELHRHTEAVIAQPPDILVAH 75
Query: 56 SSESLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A + + + S + ++
Sbjct: 76 TGIGFRGWVAAADGWGLAPQLLSALSQARIVARGPKATGALRAAGLHEEWSPKSESSREV 135
Query: 106 IVEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+ K + F + L + I Y +
Sbjct: 136 LRYLLDSGVAGKRIAVQLHGAADGWDPFPEFINGLRSAGAQVMPIHVYRWKPTPAGGEFD 195
Query: 161 KNLL----QNADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIP 206
+ + + DA+ F + + L + +C+ A +
Sbjct: 196 QLVASVARRQFDAVTFTSAPAGAALLERSRELGIEDQLLQALRSDVHAMCVGPVTAQPLI 255
Query: 207 ASYKNVVTVACFPKETSL-LKLLPLR 231
+ + L L
Sbjct: 256 RAGV------PTSSPERMRLGALARH 275
>gi|242242933|ref|ZP_04797378.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis W23144]
gi|242233534|gb|EES35846.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis W23144]
Length = 226
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/209 (11%), Positives = 52/209 (24%), Gaps = 7/209 (3%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLA 84
V P + L + SY + +S ++
Sbjct: 19 DIVHKPFIQLKQLHFNEKL-LDHSYDWLIFSSKNAVKYFYPYLKNVKVKKVAVIGDKTAQ 77
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+ + E K+ + L+ + L ++ +++
Sbjct: 78 YCNELGISVDFVPRDFSQEGFLDEFKIRE---QHLLLPSSEKARPKLVQQLSKYNEIVKI 134
Query: 145 IDCYYSQDIAYPETTMKN-LLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
+ DA+ F + S+V ++F + + + A
Sbjct: 135 DLYRPVPNFKNISQVKALVRKHQIDAVTFSSSSAVEFYFKEGNVPEFD-HYFAIGKQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I V VA SL+ + R
Sbjct: 194 TILKFN-ASVKVANKQTLDSLIDKIIESR 221
>gi|91205541|ref|YP_537896.1| hypothetical protein RBE_0726 [Rickettsia bellii RML369-C]
gi|157827257|ref|YP_001496321.1| hypothetical protein A1I_04725 [Rickettsia bellii OSU 85-389]
gi|91069085|gb|ABE04807.1| unknown [Rickettsia bellii RML369-C]
gi|157802561|gb|ABV79284.1| hypothetical protein A1I_04725 [Rickettsia bellii OSU 85-389]
Length = 244
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 84/243 (34%), Gaps = 21/243 (8%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I++TR + L T ++I K + + P+ + + + ++Y I +TS +
Sbjct: 1 MKSILLTRSWEANLETTQEIGKY-FHYINCPVIKYKTLDFNA--NILKNYSNIIVTSKYA 57
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + CR + + + + + +I + + K +
Sbjct: 58 ATIINNLSCRDLITASSNKL--DSVDKSLDYKHNIWVVGDKSREILINKGFKIAYAGKNV 115
Query: 120 IYLGGKPRNFHFEDYL--------IEHKIPLRVIDCYYSQDIAYPE-TTMKNLLQNADAI 170
L +E + + ++ Y + + + +K L + D I
Sbjct: 116 DDLMQHFPADLYEQAIYLSSNEITKDLPDKIKRYIIYNVEYLNELPLSVVKELKNSVDFI 175
Query: 171 LFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
L Y+++S L + ++ + +S +A+ + + V L+
Sbjct: 176 LLYSQNSAKTLLKLLSENNLLEYLQNSLVIAISLKVANIVR-PFFKNVVYCDDQNPNDLI 234
Query: 226 KLL 228
KLL
Sbjct: 235 KLL 237
>gi|319400985|gb|EFV89204.1| uroporphyrinogen-III synthase HemD family protein [Staphylococcus
epidermidis FRI909]
Length = 226
Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/209 (11%), Positives = 52/209 (24%), Gaps = 7/209 (3%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLA 84
+ P + L + SY + +S ++
Sbjct: 19 DIIHKPFIQLKQLHFNEKL-LDHSYDWLIFSSKNAVKYFYPYLKNVKVKKVAVIGDKTAQ 77
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+ + E K+ + L+ + L ++ +++
Sbjct: 78 YCNELGISVDFVPRDFSQEGFLDEFKIRE---QHLLLPSSEKARPKLVQQLSKYNEIVKI 134
Query: 145 IDCYYSQDIAYPETTMKN-LLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
+ DA+ F + S+V ++F + + + A
Sbjct: 135 DLYRPVPNFKNISQVKALVRKHQIDAVTFSSSSAVEFYFKGDNVPEFD-HYFAIGKQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I V VA SL+ + R
Sbjct: 194 TILKFN-ASVKVANKQTLDSLIDKIIESR 221
>gi|325962666|ref|YP_004240572.1| uroporphyrinogen-III synthase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323468753|gb|ADX72438.1| uroporphyrinogen-III synthase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 382
Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/256 (8%), Positives = 59/256 (23%), Gaps = 32/256 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
I +T +++ E +++ G + P +E + L T
Sbjct: 27 RIGVT-SDRRSSDLIEALERRGAEVLHAPALKIAPVQEDMRLIEDTRAIIEARPDLCIAT 85
Query: 56 SSESLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
++ + + G + A +
Sbjct: 86 TAYGMRRWCEAADSFGIGEQLLEVLGNCRMFVRGPKARGAVRAAGLADVGISSDETTATL 145
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN--- 162
+ K + + + L + + Y + +
Sbjct: 146 VDMLLAEGVRGKTVAVQLHGYTDVRQLERLRMSGATVLTVTPYRWVKPDGEDKLPRLIEA 205
Query: 163 -LLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKN 211
N D + F + +V + L K S + A + +
Sbjct: 206 VCSGNLDVLTFTSAPAVDALWSTAHEMGVYKQLIDTLKTSVTTAVVGPVTAQPLLDAGVT 265
Query: 212 VVTVACFPKETSLLKL 227
+ + +L++L
Sbjct: 266 P-LIPERFRMGALIRL 280
>gi|187931397|ref|YP_001891381.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712306|gb|ACD30603.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 249
Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 19/223 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A+ EK+ G + V +P + + + + Y ++ TS ++
Sbjct: 1 MKILVCRPQNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVL---DYTSLVFTSKYAV 57
Query: 61 STLPAN----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L + ++ I+++G ++A + + I+ + S L II+ Q +
Sbjct: 58 ESLFSQYPIDLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP---ETTMKNLLQNADAILFY 173
+ + G + + Y I +T K L N I+
Sbjct: 118 AIISGVSGN----DLLLEELSKLTHCHKFETYLRVFIDLDELLDTYNKLFLHNQPDIIIA 173
Query: 174 AR----SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV 212
S+ F K + + S + +
Sbjct: 174 TSLDVFKSLNRIFEKITTPKAATITIA-SLKMLKFVNQQGFKN 215
>gi|146332605|gb|ABQ22808.1| uroporphyrinogen-III synthase-like protein [Callithrix jacchus]
Length = 140
Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 34/122 (27%), Gaps = 7/122 (5%)
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ PL++ G + L + I + I Y + + + +
Sbjct: 5 CFRESSALPLLFPCGNLKREILPKTLKDKGIAMESITVYQTIPHPGIQGNLNSYYFQQGV 64
Query: 170 I---LFYARS----SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
F++ S + L F + A A+ A V A P
Sbjct: 65 PASITFFSPFGLTYSFKHIQELFGDNIDQIKFAAIGPTTARALAAQGLPVSCTAESPTPQ 124
Query: 223 SL 224
+L
Sbjct: 125 AL 126
>gi|332678665|gb|AEE87794.1| Uroporphyrinogen-III synthase, divergent, Francisella type
[Francisella cf. novicida Fx1]
Length = 249
Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 11/161 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A+ EK+ G + V +P + + + + Y ++ TS ++
Sbjct: 1 MKILVCRPQNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVL---DYTSLVFTSKYAV 57
Query: 61 STLPAN----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L + ++ I+++G ++A + + I+ + S L II+ Q +
Sbjct: 58 ESLFSQYPIDLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ + G + + Y I E
Sbjct: 118 AIISGVSGN----DLLLEELSKLTQCHKFETYSRVFIDLDE 154
>gi|289811311|ref|ZP_06541940.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 136
Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 10/136 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITS 56
M I+ITRP +++ +G + PL F+ RE + LA + S
Sbjct: 1 MSILITRPSPAGEALVSRLRALGQVAWSFPLIEFVAGRELPTLADRLATLTENDLVFALS 60
Query: 57 SESLSTLPANFCRHTPIFAIGE------ASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
S++ A R + + LA + ++ +
Sbjct: 61 QHSVAFAHAQLQRDGRNWPASPRYFSIGRTTALALHTVSGFDIRYPLDREISEALLQLPE 120
Query: 111 VLFTPQKPLIYLGGKP 126
+ K +Y +
Sbjct: 121 LQNIAGKRALYFAWQW 136
>gi|118497949|ref|YP_898999.1| uroporphyrinogen-III synthase [Francisella tularensis subsp.
novicida U112]
gi|194323171|ref|ZP_03056955.1| hypothetical protein FTE_0761 [Francisella tularensis subsp.
novicida FTE]
gi|118423855|gb|ABK90245.1| uroporphyrinogen-III synthase [Francisella novicida U112]
gi|194322535|gb|EDX20015.1| hypothetical protein FTE_0761 [Francisella tularensis subsp.
novicida FTE]
Length = 249
Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 11/161 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A+ EK+ G + V +P + + + + Y ++ TS ++
Sbjct: 1 MKILVCRPQNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVL---DYTSLVFTSKYAV 57
Query: 61 STLPAN----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L + ++ I+++G ++A + + I+ + S L II+ Q +
Sbjct: 58 ESLFSQYPIDLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ + G + + Y I E
Sbjct: 118 AIISGVSGN----DLLLEELSKLTQCHKFETYSRVFIDLDE 154
>gi|56708456|ref|YP_170352.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670927|ref|YP_667484.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
tularensis FSC198]
gi|224457607|ref|ZP_03666080.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254371080|ref|ZP_04987082.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254875300|ref|ZP_05248010.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604948|emb|CAG46041.1| Uroporphyrinogen III synthase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110321260|emb|CAL09424.1| Uroporphyrinogen III synthase [Francisella tularensis subsp.
tularensis FSC198]
gi|151569320|gb|EDN34974.1| hypothetical protein FTBG_00837 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841299|gb|EET19735.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159649|gb|ADA79040.1| Uroporphyrinogen III synthase [Francisella tularensis subsp.
tularensis NE061598]
Length = 249
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 11/161 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A+ EK+ G + V +P + + + + Y ++ TS ++
Sbjct: 1 MKILVCRPQNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVL---DYTSLVFTSKYAV 57
Query: 61 STLPA----NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L + ++ I+++G ++A + + I+ + S L II+ Q +
Sbjct: 58 ESLFSQYPIYLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ + G + + Y I E
Sbjct: 118 AIISGVSGN----DLLLEELSKLTHCHKFETYLRVFIDLDE 154
>gi|325140069|gb|EGC62598.1| uroporphyrinogen-III synthase [Neisseria meningitidis CU385]
Length = 253
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 62/229 (27%), Gaps = 13/229 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA--MQQSYGAIAITSSESLS 61
+I RP +A E G+ ++ D + L A+ S ++
Sbjct: 9 LIVRPSGRAAEDVETCLNAGWRAEVLSPVEIEADAAGLELLSEQYARADAVFWVSPTAVE 68
Query: 62 TLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
T I A + S + + D + + A + +
Sbjct: 69 TAVPYLNLSDGIKAQIAVGQGSRRALERCLVRTVIAPDDGNDSEAVLRLPVWNSLPEGAR 128
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++++ G + L E V + Y+ + + +N A + V
Sbjct: 129 VLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELV 186
Query: 179 LYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
F P S + IA A+ V P +
Sbjct: 187 RLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 233
>gi|227496730|ref|ZP_03927004.1| uroporphyrinogen III synthase HEM4 [Actinomyces urogenitalis DSM
15434]
gi|226833761|gb|EEH66144.1| uroporphyrinogen III synthase HEM4 [Actinomyces urogenitalis DSM
15434]
Length = 275
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/265 (13%), Positives = 70/265 (26%), Gaps = 42/265 (15%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITSSE 58
++ R A +++ G + L+ + L + +TS++
Sbjct: 2 LLGRSRP-ADPFARVLREAGAEVDTLALTVTSPGTPEEVERAHALISSGWPQWVVVTSAQ 60
Query: 59 SLSTLP-------------------------------ANFCRHTPIFAIGEASACLARQK 87
+L L T + A+G +A
Sbjct: 61 TLEVLDLSRLGTSEEANGGAVRGDSQDGVSARSCEDGCLLLPPTRLAAVGPRTAHALAAV 120
Query: 88 GFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDC 147
Q + +E+ + P ++ + L + ++
Sbjct: 121 TGRQPDVVGGSDAEALAQALEEAGV-GPGTRVLLPQSALARPVLAERLEDLGAQVQRAAV 179
Query: 148 YYSQDIA----YPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
Y + P DA++ A S+ L PA S + L
Sbjct: 180 YTTVTAPASCLPPAFATHWRGGAWDAVVLTAGSAARALTELAGPAPASTVVVTLGRPSQL 239
Query: 204 AIPASYKNVVTVACFPKETSLLKLL 228
A A+ V +A P +LK L
Sbjct: 240 AAQAAGLKVAALAPTPTAEGVLKAL 264
>gi|271967204|ref|YP_003341400.1| uroporphyrinogen-III synthase-like protein [Streptosporangium
roseum DSM 43021]
gi|270510379|gb|ACZ88657.1| Uroporphyrinogen-III synthase-like protein [Streptosporangium
roseum DSM 43021]
Length = 389
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/249 (9%), Positives = 55/249 (22%), Gaps = 31/249 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY------GAIAITSSESLSTLPAN 66
+++ G V P + E L + +T+ A
Sbjct: 34 EEFCALLERRGARVVRAPAIRLVPLAEDADLLAATRAALTGPLDDVVVTTGVGFRGWMAA 93
Query: 67 FCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + H + + ++
Sbjct: 94 AEGWGLSGDLSAHLTAARLLTRGPKARGAVRAAGLNDHWTPATESCEEVKQYLLAQDLRG 153
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL----F 172
+ + F L E + + Y + + Q+ + F
Sbjct: 154 RRIAVQLHGEPLTGFVAALREAGAEVIEVPVYRWLPYRDTSPLRRLISQSISGGVDAVAF 213
Query: 173 YARSSVLYFFSLPLPAKISAAFL----------CLSNNIASAIPASYKNVVTVACFPKET 222
+ +VL + + A + C+ A+ + A V +
Sbjct: 214 TSAPAVLAMLAAARADGLEDALVAAFAGPVVAACVGPVTAAPLQARGVPAVQ-PERARLG 272
Query: 223 SLLKLLPLR 231
+L + L
Sbjct: 273 ALARTLARH 281
>gi|27468262|ref|NP_764899.1| uroporphyrinogen III synthase [Staphylococcus epidermidis ATCC
12228]
gi|57867138|ref|YP_188807.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis RP62A]
gi|282875910|ref|ZP_06284777.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis SK135]
gi|27315808|gb|AAO04943.1|AE016748_177 uroporphyrinogen III synthase [Staphylococcus epidermidis ATCC
12228]
gi|57637796|gb|AAW54584.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis RP62A]
gi|281294935|gb|EFA87462.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis SK135]
gi|329724709|gb|EGG61215.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis VCU144]
gi|329737293|gb|EGG73547.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis VCU028]
Length = 226
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/209 (11%), Positives = 52/209 (24%), Gaps = 7/209 (3%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLA 84
+ P + L + SY + +S ++
Sbjct: 19 DIIHKPFIQLKQLHFNEKL-LDHSYDWLIFSSKNAVKYFYPYLKNVKVKKVAVIGDKTAQ 77
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+ + E K+ + L+ + L ++ +++
Sbjct: 78 YCNELGISVDFVPRDFSQEGFLDEFKISE---QHLLLPSSEKARPKLVQQLSKYNEVVKI 134
Query: 145 IDCYYSQDIAYPETTM-KNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
+ DA+ F + S+V ++F + + + A
Sbjct: 135 DLYRPVPNFKNISQVKSLVRKHQIDAVTFSSSSAVEFYFKEDNVPEFD-HYFAIGKQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I V VA SL+ + R
Sbjct: 194 TILKFN-TSVKVANKQTLDSLIDKIIESR 221
>gi|213406673|ref|XP_002174108.1| uroporphyrinogen-III synthase [Schizosaccharomyces japonicus
yFS275]
gi|212002155|gb|EEB07815.1| uroporphyrinogen-III synthase [Schizosaccharomyces japonicus
yFS275]
Length = 256
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/250 (17%), Positives = 83/250 (33%), Gaps = 27/250 (10%)
Query: 1 MY-IVITRPI-KKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAI 54
M +++ + A + K Y +PL + E F + Y + I
Sbjct: 1 MRTVLLLKNKSNGADEYELAFAKKNYKIAYLPLLTHTYIHETELRKCFQNLPSKYSGLII 60
Query: 55 TSSESLSTLP-----------ANFCRHTPIFA-IGEASACLARQKGFTQIFHGKDNSINL 102
TS ++ + +N + P+F + + + + L
Sbjct: 61 TSQRAIEFVNTILGDLNDEESSNIRKDIPVFILGHASDRYARTAGFYKRYGKDSGCAEKL 120
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
A I+E + F PQKP+++L G+ L H+IPL + Y + ++ + N
Sbjct: 121 ADEIIEWYLKFQPQKPMLFLMGEKHRETLPVKLNVHRIPLTTLTIYKTTEVPNASDLINN 180
Query: 163 LLQNA----DAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++F SV+ + S + + VA
Sbjct: 181 CLDKDHSITWIVIFSPLQSVISVLRHCT-----VNIATIGPTTESHLLNNGIIPSVVAPK 235
Query: 219 PKETSLLKLL 228
P+ SL + +
Sbjct: 236 PEALSLAETI 245
>gi|195444138|ref|XP_002069731.1| GK19190 [Drosophila willistoni]
gi|194165816|gb|EDW80717.1| GK19190 [Drosophila willistoni]
Length = 250
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 59/202 (29%), Gaps = 14/202 (6%)
Query: 41 VFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDN-- 98
L Y I + + + + + + ++ N
Sbjct: 47 AKLLNPHKYAGIILCAPRCVYAVNEALQKDPLPTCWRPLHNYALGKNTRNMAYYSLQNLP 106
Query: 99 -------SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
S + ++ + P + G + L+ + +C+ SQ
Sbjct: 107 TMGVSACSAHNLCDLIRETFGPKRDLPFLLPCGNLASNTLHLRLVAQGFRVDSCECFESQ 166
Query: 152 DIAYPETTMKN--LLQNADAILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIP 206
+ +MK L+ + I+F++ +SV +S + + A+
Sbjct: 167 CHPHFMNSMKQALKLKKLETIVFFSPASVKSGAEFIKKYSVSIEDRKLIAVGRQTQKAML 226
Query: 207 ASYKNVVTVACFPKETSLLKLL 228
S + + P E S++ +
Sbjct: 227 ESGLKIHRLVESPLEESVVNAI 248
>gi|229490999|ref|ZP_04384832.1| uroporphyrinogen-III synthetase [Rhodococcus erythropolis SK121]
gi|229322115|gb|EEN87903.1| uroporphyrinogen-III synthetase [Rhodococcus erythropolis SK121]
Length = 386
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 57/258 (22%), Gaps = 44/258 (17%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRH 70
+A + + G V P I + L I E + R
Sbjct: 19 RAEEFATLLTRRGADVVHAPAIRIIPLADDRELERVT--QQIISDPPEVVVATTGIGFRG 76
Query: 71 TPIFAIGEASA------------------CLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
A G A + S + A+++
Sbjct: 77 WLEAADGWGEAENLGSALGSARLLARGPKAKGAIRAADLREEWSPASESSAEVLEHLLAE 136
Query: 113 FTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--- 164
K + F L E + + Y + P + +
Sbjct: 137 GVSGKRIAVQLHGATTEWEPIPDFCQVLREAGAEVIAVPVYRWEPPEDPTLLDRMIDAIA 196
Query: 165 -QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
DA+ F + +V + + A +C+ ++ + A
Sbjct: 197 SAGIDAVSFTSAPAVASMLMRADKTGDLGDILDAMRGPVAAMCVGPVTSAPLEALN---- 252
Query: 214 TVACFPKETSLLKLLPLR 231
V + L L
Sbjct: 253 -VPTTAPARARLGALARH 269
>gi|260910554|ref|ZP_05917221.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635325|gb|EEX53348.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 248
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 63/242 (26%), Gaps = 18/242 (7%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAI 54
I+I++P + + E ++ G V P F +Y AI
Sbjct: 4 KILISQPKPTSDKSPYFDIE--REYGVDLVFRPFVQVEGITSKEFRQQKVSIPNYTAIVF 61
Query: 55 TSSESLSTLPA------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
TS ++ T + + L QK +
Sbjct: 62 TSRHAIDHFFKLAKELRVTIPETLKYFCVTETIALYIQKYVQYRKRKVFFGTTGKMEDLL 121
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ Q+ + N L K+ Y + + +KN + D
Sbjct: 122 PTMAKHKQEKYLVPMSDNHNDDIAKLLDSKKLNHTECVMYRTITNDFTADEIKNF--DYD 179
Query: 169 AILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
++F + + V F K + AI + A + S+
Sbjct: 180 MLIFVSPTGVKSFVKDFPDFKQGDVRIGTFGPATSKAITDEGLRLDFQAPSKEYPSMSGA 239
Query: 228 LP 229
L
Sbjct: 240 LK 241
>gi|134301551|ref|YP_001121519.1| putative uroporphyrinogen III synthase [Francisella tularensis
subsp. tularensis WY96-3418]
gi|134049328|gb|ABO46399.1| putative uroporphyrinogen III synthase [Francisella tularensis
subsp. tularensis WY96-3418]
Length = 249
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 11/161 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A+ EK+ G + V +P + + + + Y ++ TS ++
Sbjct: 1 MKILVCRPQNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVL---DYTSLVFTSKYAV 57
Query: 61 STLPAN----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L + ++ I+++G ++A + + I+ + S L II+ Q +
Sbjct: 58 ESLFSQYPIDLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ + G + + Y I E
Sbjct: 118 AIISGVSGN----DLLLEELSKLTHCHKFETYLRVFIDLDE 154
>gi|15614058|ref|NP_242361.1| methyltransferase/uroporphyrinogen-III synthase [Bacillus
halodurans C-125]
gi|10174112|dbj|BAB05214.1| methyltransferase/uroporphyrinogen-III synthase [Bacillus
halodurans C-125]
Length = 485
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 64/242 (26%), Gaps = 27/242 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
++I R + + + + G P + V Q + TS S+
Sbjct: 258 VLIGRTTAEEGGLAKTLMEAGAEVFEFPRWHVTSKPWEVTPGEVQEADHLVFTSPHSVHF 317
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
+ S A +K I + L ++
Sbjct: 318 FFESLTEQRMDIRHIRGSFFAASKKSLKIIRSFACTAALLQELPA--------------- 362
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-----NADAILFYARSS 177
GGK F E+ ++ K P + +++ + + ++F + +S
Sbjct: 363 GGKTIIFGDEENEMKQKYPFEEASYVSTHQKTLVPQSLRTCRRLLDEGRIETLVFPSAAS 422
Query: 178 VLYFFSLPLPAKISA-------AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
V S + ++A + V P L++ L
Sbjct: 423 VNAVIDGLEKCGESVGTLSQVKTVITFGPESSNAAKEAGFQVDIQLEAPSAQLLIETLEA 482
Query: 231 RR 232
R
Sbjct: 483 VR 484
>gi|157737423|ref|YP_001490106.1| putative uroporphyrinogen III cosynthase HemD [Arcobacter butzleri
RM4018]
gi|157699277|gb|ABV67437.1| putative uroporphyrinogen III cosynthase HemD [Arcobacter butzleri
RM4018]
Length = 209
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 17/213 (7%)
Query: 18 KIQKMGYI-PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL--PANFCRHTPIF 74
+ + + + + + + V L + Y A+ TS + + + P +
Sbjct: 6 LLNEQKHEDVENLEVFQIEYIKSYVDL---KKYDALVFTSKNGVKAINSFNQDWKSIPSY 62
Query: 75 AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDY 134
AI + +A + G F G N ++ + K ++Y+ + +
Sbjct: 63 AIAQKTANTIIKLGGVVEFIGNSGHGNDFAYELKNVLKD---KKVLYVKALKTVSNLPNI 119
Query: 135 LIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAF 194
L E+ I L I Y + +L+ +F + SSV FF K S
Sbjct: 120 LKENGISLDEIIAYKTSCKKLNI-----ILEENSIFIFTSPSSVECFFKQY-SWKNSYKA 173
Query: 195 LCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + A +P++ ++ +KL
Sbjct: 174 IVIGKTTAEFLPSN--INYEISSQTSVEECIKL 204
>gi|283956477|ref|ZP_06373957.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
1336]
gi|283792197|gb|EFC30986.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
1336]
Length = 209
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 61/208 (29%), Gaps = 16/208 (7%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR-HTPIFAIGEASACLA 84
+ L+ + S+ L++ Y A+ TS +L L + + +
Sbjct: 14 VENLILNEIVFYDFSIDLSL---YDALICTSKNALKALQHAKTTLNFKLNLYAVGQSTAQ 70
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
K + + +E + +YL K L + L
Sbjct: 71 YAKNLGFKKIKIPSKAYGKDLFLE-FKEELKTQKCLYLRAKNIVSTLNLDLKNAGVDLDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y + + L + +F + SV FF + + + + A
Sbjct: 130 MIVYKNVFKKGDKK-----LTHPAIFIFTSPLSVENFFKFYSVKEED-KIVAIGQSTAKK 183
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + SLL+ + L +
Sbjct: 184 L--LNFKNLYICE---NQSLLECVKLAK 206
>gi|309812401|ref|ZP_07706156.1| uroporphyrinogen-III synthase [Dermacoccus sp. Ellin185]
gi|308433706|gb|EFP57583.1| uroporphyrinogen-III synthase [Dermacoccus sp. Ellin185]
Length = 316
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/244 (9%), Positives = 55/244 (22%), Gaps = 32/244 (13%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
IVIT +KA +++ G + + + L + + +T
Sbjct: 49 RIVIT-AQRKADEFAAPLERRGAEVIRAATMSHVPHVDDPELLAHTRALIEEPPDLLVVT 107
Query: 56 SSESLSTLP---------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ I + + A+ I
Sbjct: 108 TGIGFRGWFEAAEAAGLRERLLDALRTTRIYARGPKARGAVVGAGLEVTWTAASETAEEI 167
Query: 107 VEQKVLFTPQK-PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL-- 163
E+ + + + ++ L + + Y P + +
Sbjct: 168 KERLRGESLDGVRVAVQHHGAGSDGIDETLRAAGADVVSLVVYRWGPAPDPSAVARAVDL 227
Query: 164 --LQNADAILFYARSSVLYFFSLPLPAKIS-----------AAFLCLSNNIASAIPASYK 210
+ D + F A V F + C+ + A+ +
Sbjct: 228 VARSDVDVVAFTAAPGVFAFLDAARASGQQDAVLDMLREGRVIAACVGDTTAAPLRECGV 287
Query: 211 NVVT 214
+
Sbjct: 288 EPIV 291
>gi|323452430|gb|EGB08304.1| hypothetical protein AURANDRAFT_60095 [Aureococcus anophagefferens]
Length = 292
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 67/241 (27%), Gaps = 26/241 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLS------YFIHDRESVFLAMQQSYGAIAITS 56
+ +TR K ++ G V +P ++ L + +++ + ITS
Sbjct: 43 VALTREQGKNDGLAAALE--GVASVEIPAVAQTRTADMEAALDAALLFVDEAWDWVVITS 100
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLA--------------RQKGFTQIFHGKDNSINL 102
E+ T R R+ G + H +
Sbjct: 101 PEAARTFGDAAARSGVSMMRDARWRGFRLAAVGAATADALRARETGGWRDVHAPAKATAA 160
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
+ + P + ++Y ED L + ++ +D Y ++ A+
Sbjct: 161 SLAASLPRNESRPYENVLYPASALAARTLEDGLADRGFRVKRVDSYTTEPAAWTADDAAR 220
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
A + + S+ + + A C+ A A + V P
Sbjct: 221 AAAAAVVAI-GSPSAARVWAERVGTGQ---AAACIGETSARACEDLGFSAVFFPDKPGIP 276
Query: 223 S 223
Sbjct: 277 G 277
>gi|226305696|ref|YP_002765656.1| hypothetical protein RER_22090 [Rhodococcus erythropolis PR4]
gi|226184813|dbj|BAH32917.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 386
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/258 (11%), Positives = 57/258 (22%), Gaps = 44/258 (17%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRH 70
+A + + G V P I + L I E + R
Sbjct: 19 RAEEFATLLTRRGADVVHAPAIRIIPLADDRELERVT--QQIISDPPEVVVATTGIGFRG 76
Query: 71 TPIFAIGEASA------------------CLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
A G A + S + A+++
Sbjct: 77 WLEAADGWGEAENLGSALGSARLLARGPKAKGAIRAADLREEWSPASESSAEVLEHLLAE 136
Query: 113 FTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--- 164
K + F L + + + Y + P + +
Sbjct: 137 GVSGKRIAVQLHGATTEWEPIPDFCQVLRDAGAEVIAVPVYRWEPPEDPTLLDRMIDAIA 196
Query: 165 -QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
DA+ F + +V + + A +C+ ++ + A
Sbjct: 197 SAGIDAVSFTSAPAVASMLMRADKTGDLGDILDAMRGPVAAMCVGPVTSAPLEALN---- 252
Query: 214 TVACFPKETSLLKLLPLR 231
V + L L
Sbjct: 253 -VPTTAPARARLGALARH 269
>gi|118464556|ref|YP_884021.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium avium 104]
gi|118165843|gb|ABK66740.1| uroporphyrinogen-III synthetase [Mycobacterium avium 104]
Length = 387
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/266 (8%), Positives = 53/266 (19%), Gaps = 43/266 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T +A +++ G I E L Q +
Sbjct: 17 RIAVT-SANRAEELCALLRRNGAEVTSAAAINIIALPEDQELHRHTEAVITQPPDILVAH 75
Query: 56 SSESLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A + + + S + ++
Sbjct: 76 TGIGFRGWVAAADGWGLAPQLLSALSQARIVARGPKATGALRAAGLHEEWSPKSESSREV 135
Query: 106 IVEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+ K + F + L + I Y +
Sbjct: 136 LRYLLDSGVAGKRIAVQLHGAADGWDPFPEFINGLRSAGAQVMPIHVYRWKPTPAGGEFD 195
Query: 161 KNLL----QNADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIP 206
+ + + DA+ F + + L + +C+ A +
Sbjct: 196 QLVASVARRQFDAVTFTSAPAGAALLERSRELGIEDQLLQALRSDVHAMCVGPVTAQPLI 255
Query: 207 ASYKNVVTVACFPKETSL-LKLLPLR 231
+ + L L
Sbjct: 256 RAGV------PTSSPERMRLGALARH 275
>gi|256787414|ref|ZP_05525845.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces lividans TK24]
gi|289771313|ref|ZP_06530691.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289701512|gb|EFD68941.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 383
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/239 (9%), Positives = 59/239 (24%), Gaps = 31/239 (12%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSE 58
+T ++A + + G + P + + L + ++ + T++
Sbjct: 20 VT-AARRADELGALLGRRGATVLHAPALRIVPLADDGELMAATKRIVDRAPDVVVATTAI 78
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVE 108
A+ E + + S ++A+++
Sbjct: 79 GFRGWVEAADGWGLGDALLERLRTVELLARGPKVKGAVRAAGLTERWSPASESMAEVLDR 138
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----NLL 164
+ + F + L E + + Y + +
Sbjct: 139 LLEQGVAGRRIAVQLHGEPLPGFVEALREGGAEVVGVPVYRWLPPEDLGPVDRLLDAAVS 198
Query: 165 QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ DA+ F + + + L C+ A + A + V
Sbjct: 199 RGVDAVTFTSAPAAVSLLGRAEERGLLPELLAAFGHDVLPACVGPVTAVPLQAHGVDTV 257
>gi|145591432|ref|YP_001153434.1| uroporphyrinogen III synthase HEM4 [Pyrobaculum arsenaticum DSM
13514]
gi|145283200|gb|ABP50782.1| Uroporphyrinogen III synthase HEM4 [Pyrobaculum arsenaticum DSM
13514]
Length = 281
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 63/257 (24%), Gaps = 28/257 (10%)
Query: 1 MY--IVIT--RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF--LAMQQSYGAIAI 54
M ++IT RP KA + K G + +P+ L A+
Sbjct: 23 MKWAVIITSGRPS-KADLLARLVFKHGGEALYLPVVKVEERGADAQEVLEALAWSEAVLF 81
Query: 55 TSSESLSTLPANFCRHT-----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
+ +S L RH+ C + NL + I E
Sbjct: 82 MTGQSAWGLAEMLKRHSALEKAKEMLRSRVVVCRGSKASGNVKTQFGVECPNLGETIDEM 141
Query: 110 KVLFTPQ---KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLL 164
K L+ + + L + + Y + + + +
Sbjct: 142 MPKIGQYVSGKRLLVSFYGVVDSELLEKLRAVAGEVSYVQTYSTVEAPEENALEAARRVA 201
Query: 165 QNADAILFYARSSVLYFFSLPLPAKI-----------SAAFLCLSNNIASAIPASYKNVV 213
+ I+F + FF+ + + + + V
Sbjct: 202 EGGYIIVFTSAVGASTFFAAAQRHGLLEKVVEALNSGRSIAAVIGPVTEEEVKRWGVEKV 261
Query: 214 TVACFPKETSLLKLLPL 230
P L + L
Sbjct: 262 VKPEKPFLAYLAEELAK 278
>gi|220912074|ref|YP_002487383.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Arthrobacter chlorophenolicus A6]
gi|219858952|gb|ACL39294.1| Uroporphyrinogen III synthase HEM4 [Arthrobacter chlorophenolicus
A6]
Length = 387
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/256 (8%), Positives = 59/256 (23%), Gaps = 32/256 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T +++ + +++ G + P +E + L T
Sbjct: 32 RIGVT-SHRRSQDLIDALERRGAEVIHAPALKIAPVQEDLRLIEDTRTIIAAKPDLCIAT 90
Query: 56 SSESLSTLPANFCRHTP----------IFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
++ + + G + A +
Sbjct: 91 TAYGMRRWCEAADTFGIGDQLLETLGACRMFVRGPKARGAVRAAGLADVGISSDETTATL 150
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK---- 161
+ K + + + L + + Y + +
Sbjct: 151 VDMLLAEGVRGKTVAVQLHGYTDVRQLERLRMSGATVLTVTPYRWVKPDGADRLPRLIEA 210
Query: 162 NLLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKN 211
N D + F + +V + L K + + A + +
Sbjct: 211 ACSGNLDVLTFTSAPAVDAMWSTAHEMGVYKQLIESLKTNVTTAVVGPVTAQPLLDAGVK 270
Query: 212 VVTVACFPKETSLLKL 227
+ + +L++L
Sbjct: 271 P-LIPERFRMGALIRL 285
>gi|297200053|ref|ZP_06917450.1| uroporphyrinogen-III synthase [Streptomyces sviceus ATCC 29083]
gi|197710526|gb|EDY54560.1| uroporphyrinogen-III synthase [Streptomyces sviceus ATCC 29083]
Length = 384
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/240 (9%), Positives = 56/240 (23%), Gaps = 31/240 (12%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSE 58
+T ++A +Q+ G + P + + L Q+ + T++
Sbjct: 21 VT-AARRADELGALLQRRGAAVLHAPALRIVPLSDDSELLAATKDLIDQAPDVVVATTAI 79
Query: 59 SLSTLPAN----------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
R + + + +S ++A+++
Sbjct: 80 GFRGWVEAAEGWGLGETLLDRLREVELLARGPKVKGSIRAAGLTEDWSPSSESMAEVLDR 139
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----NLL 164
+ + F + L + + Y + +
Sbjct: 140 LLEEGVEGRRIAIQLHGEPLPGFVEALRAGGAEVVGVPVYRWMPPEDIGPVDRLLDAAVS 199
Query: 165 QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNVVT 214
+ DA+ F + + L C+ A + A V
Sbjct: 200 RGLDALTFTSAPAAASLLSRAEDRSLLPELLAALNHDVLPACVGPVTAVPLQARGVETVA 259
>gi|228993204|ref|ZP_04153125.1| Uroporphyrinogen III synthase HEM4 [Bacillus pseudomycoides DSM
12442]
gi|228766530|gb|EEM15172.1| Uroporphyrinogen III synthase HEM4 [Bacillus pseudomycoides DSM
12442]
Length = 72
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
++ITR +A + ++K G IP+ +PL + + F +Y + TS
Sbjct: 9 VLITRAQHQAKQMSVAVKKQGGIPLEIPLLHIEGVSQQEFQGISQQLHTYDWVIFTSKNG 68
Query: 60 LSTL 63
+S
Sbjct: 69 VSFF 72
>gi|229495376|ref|ZP_04389111.1| uroporphyrinogen-III synthase [Porphyromonas endodontalis ATCC
35406]
gi|229317819|gb|EEN83717.1| uroporphyrinogen-III synthase [Porphyromonas endodontalis ATCC
35406]
Length = 251
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 62/222 (27%), Gaps = 15/222 (6%)
Query: 20 QKMGYIPVMMPLSYFIHDRESVFLAMQQS---YGAIAITSSESLSTLPA-------NFCR 69
+K GY L + + F + + AI TS ++ A
Sbjct: 27 EKYGYEVEFRQLIKVVPVEAAEFRRQRVDILGHSAIIFTSKSAIDNFFALTKELRLTIPE 86
Query: 70 HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNF 129
F EA A ++ + + + + + ++ +
Sbjct: 87 GMKYFCQSEAVALYLQKYIVYRKRKVFYAPNSFSLADMLTVIGKHAKETYFVPVAEDHGQ 146
Query: 130 HFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAK 189
D L E KI Y + + E + D ILF++ + L +
Sbjct: 147 ELFDKLTEKKITFHSAVMYRTVTRDFEEPLPIDH----DIILFFSPYGIRSVKELYPDFE 202
Query: 190 ISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ + ++ V A P+ S++ L
Sbjct: 203 QGDRVVGSFGSLTTESLKERGIRVDFTAPTPECPSMVVALEK 244
>gi|319443036|ref|ZP_07992192.1| Uroporphyrinogen III synthase HEM4 [Corynebacterium variabile DSM
44702]
Length = 395
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/246 (9%), Positives = 55/246 (22%), Gaps = 31/246 (12%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITSSESLSTLP 64
++ +++ G + P + L + +T+
Sbjct: 23 RSGEFSTALERHGAETTVAPSLTITSHFDDAELLDATHRIIADPPDIVIVTTGVGFRGWM 82
Query: 65 A----------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ +G + A+I
Sbjct: 83 DATEQDGSQEELLAALEAAQILVRGPKARGAVQGVGLDIDWVAETETSAEITEFLLAEGV 142
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----NADAI 170
++ + E L + +R + Y P+ + DA+
Sbjct: 143 RDAKVVIQHHGEGDPLMEQILQDAGAEVRGLVIYRWGPPPDPDLVARTTGMVAGGAVDAV 202
Query: 171 LFYARSSVLYFFSLP----------LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
LF + + A F + A+ + VV V +
Sbjct: 203 LFTSAPGARAWLKTAERIGTLPAIRQLAGERTMFGAVGPITAAPLRTRGFEVV-VPERYR 261
Query: 221 ETSLLK 226
+L++
Sbjct: 262 LGALVR 267
>gi|158317844|ref|YP_001510352.1| uroporphyrin-III C-methyltransferase [Frankia sp. EAN1pec]
gi|158113249|gb|ABW15446.1| uroporphyrin-III C-methyltransferase [Frankia sp. EAN1pec]
Length = 570
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 67/222 (30%), Gaps = 5/222 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE--SVFLAMQQSYGAIAITSSES 59
+++ R + +++++G V +S + + + A+ + G + S E
Sbjct: 333 RVLVPRTRARQGLLARRLRELGGEAVETVVSRLVPTGDATPLREALPGADGLVLADSDEV 392
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + T + A+ + A + + + + T P+
Sbjct: 393 AAVVSLLRGAGTDVRALAGLTLVAASASAAAALDALGLACARSSAEVQVAHTVVTEV-PV 451
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
L I +R++ ++ +++ + DA+ + ++
Sbjct: 452 PGLRVVICGAAPPPVGIRTLRRVRLLADAPAEADPRIAEELRH--GDVDAVALASSTAAR 509
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
L P S + A A A V + P
Sbjct: 510 CLVELYGPLPDSVLVAAMGRRTAQACEAVGLRVDAIPSEPGI 551
>gi|302875077|ref|YP_003843710.1| uroporphyrin-III C-methyltransferase [Clostridium cellulovorans
743B]
gi|307690299|ref|ZP_07632745.1| uroporphyrin-III C-methyltransferase [Clostridium cellulovorans
743B]
gi|302577934|gb|ADL51946.1| uroporphyrin-III C-methyltransferase [Clostridium cellulovorans
743B]
Length = 509
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 75/245 (30%), Gaps = 15/245 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM----QQSYGAIAITSS 57
I IT K + Q++++K+ V + S +++ L Y + TS
Sbjct: 259 RIGITGTPKTTEKLQKEVEKIRGKAVNLSFSKVCEFQDNTELIKALKHLNDYNWLVFTSP 318
Query: 58 ESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ + + + K I K +
Sbjct: 319 NGVDIFFKKAKEYLVDYRSFSKVKFAVVGDGTAEVLKNNGFIADYKPEKFTTKSLGEGLS 378
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ P + ++ L + + D L K+ + I YY T + N + D +
Sbjct: 379 NIVLPNETVLLLRAEESSEELTDILDGRKVKYQEIKTYYLSKDFEKRTELLNEIDYLDYL 438
Query: 171 LFYARSSVLYFFSLPLPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+F + S V F+ ++ +C+ A + + + +++
Sbjct: 439 VFLSASGVNGFYENLDTKYLNILKNVQIICIGEMTAKTLEKYNIKNYIMPKKYCVSGIIE 498
Query: 227 LLPLR 231
LL +
Sbjct: 499 LLKEK 503
>gi|329936531|ref|ZP_08286267.1| transcriptional regulator [Streptomyces griseoaurantiacus M045]
gi|329304046|gb|EGG47928.1| transcriptional regulator [Streptomyces griseoaurantiacus M045]
Length = 393
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 61/241 (25%), Gaps = 35/241 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSE 58
+T ++A +++ G + P + + L Q+ + T++
Sbjct: 33 VT-AARRAEELGALLERRGAVVQHAPALRIVPLSDDSELLAATKELLHQTPDVVVATTAI 91
Query: 59 SLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ A G R G T+ + S ++A+++
Sbjct: 92 GFRGWIEAADGWGLGEELLTRLRDVELLARGPKVKGAVRAAGLTERWSPS--SESMAEVL 149
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+ + F + L E + + Y +
Sbjct: 150 DRLLEEGVEGRRIAVQLHGEPLPGFVEALRESGAEVVGVPVYRWMPPEDVGPLDRLLDTT 209
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNV 212
+ DA+ F + + FS + C+ A + A
Sbjct: 210 VAGGIDALTFTSAPAAASLFSRARERGMLDDLLAVLGHEVLAACVGPVTAVPLQARGVPT 269
Query: 213 V 213
V
Sbjct: 270 V 270
>gi|269796871|ref|YP_003316326.1| uroporphyrinogen-III synthase [Sanguibacter keddieii DSM 10542]
gi|269099056|gb|ACZ23492.1| uroporphyrinogen-III synthase [Sanguibacter keddieii DSM 10542]
Length = 347
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 32/116 (27%), Gaps = 2/116 (1%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYARS 176
++ G E L E + Y + P + + DA++ + S
Sbjct: 210 RVLLPLGDLARPTLEVGLRERGYEPVRVTTYRTVSHPAPGDVVTDWRDGAYDAVVLTSGS 269
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
P + + A + + V VA + LL L R
Sbjct: 270 VAREVAGQLGPHS-DVRAVAIGEPTRRAAVETGQAVTAVARTADDDGLLAALVAAR 324
Score = 41.3 bits (95), Expect = 0.094, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 8/76 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS---YFIH-----DRESVFLAMQQSYGAIA 53
++++ R + ++ G V+ PL +V +A
Sbjct: 24 HVLVPRAPGRGAGLARLVEAAGGTAVVAPLVSRAEIGPEDQATLDAAVAGLRDGHVAWVA 83
Query: 54 ITSSESLSTLPANFCR 69
+TS ++ L A+ R
Sbjct: 84 VTSVNAVDELVASARR 99
>gi|325102976|ref|YP_004272630.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145]
gi|324971824|gb|ADY50808.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145]
Length = 532
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/229 (10%), Positives = 64/229 (27%), Gaps = 13/229 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ I+R + + + K L + + + + + I S ++
Sbjct: 307 KVFISRELSEYSYFARAMAKHEIEIDARSLIKTVPTIHKIDSYIFKHFDWIFFNSKNAIE 366
Query: 62 TLP---ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
++ +G S R ++S I E+
Sbjct: 367 YFFNLDPVLPKNIKFGVVGRGSEDALRLVVGRVPDFIGESSDTAE--IAEEFATVANGTN 424
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
+++ K L ++ + Y + + + + ++L +F + S+V
Sbjct: 425 VLFPLAKDSLRSIVKGLSPD-TKIKELVVYETILLDDVDKSYADVL------VFTSPSNV 477
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+F L + + + + + P E L +
Sbjct: 478 EAYFENNLLDPEQ-KIVSIGASTGKKLEEINITSYILPASPDEIGLAEA 525
>gi|326779020|ref|ZP_08238285.1| Uroporphyrinogen III synthase HEM4 [Streptomyces cf. griseus
XylebKG-1]
gi|326659353|gb|EGE44199.1| Uroporphyrinogen III synthase HEM4 [Streptomyces cf. griseus
XylebKG-1]
Length = 380
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/238 (9%), Positives = 54/238 (22%), Gaps = 35/238 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP 64
+T ++A +++ G + P + + L + + +
Sbjct: 18 VT-AARRAEELATLLERRGAAVLHAPALRIVQLADDSELLAATR--ELIGHAPDVAVATT 74
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQ------------------IFHGKDNSINLAKII 106
A R A G + S ++A+++
Sbjct: 75 AIGFRGWIEAADGWGVGDALLKTLGGVELLARGPKVKGAVRAAGLTETWSPGSESMAEVL 134
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+ + F + L + V+ Y +
Sbjct: 135 DRLLAQGVAGRRIALQLHGEPLPGFVESLTAAGADVVVVPVYRWMPPRDIAPLDRMLDVT 194
Query: 163 LLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYK 210
+ DAI F + + F + + C+ A + A
Sbjct: 195 AARGLDAITFTSAPAAASFLGRAETRGLLPEILGALRDDVLVACVGPVTALPLQARGI 252
>gi|294629635|ref|ZP_06708195.1| uroporphyrinogen-III synthase domain-containing protein
[Streptomyces sp. e14]
gi|292832968|gb|EFF91317.1| uroporphyrinogen-III synthase domain-containing protein
[Streptomyces sp. e14]
Length = 389
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 55/239 (23%), Gaps = 31/239 (12%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSE 58
+T ++A +Q+ G V P + + L + + T++
Sbjct: 22 VT-AARRADELGALLQRRGASVVHAPALRIVPLADDGELLAATKEIIGHTPDIVVATTAI 80
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVE 108
A+ + +S +LA+++
Sbjct: 81 GFRGWVEAADGWGLGEALLGRLREAELLARGPKVKGAIRAAGLTEEWSPSSESLAEVLDR 140
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----NLL 164
+ + F + L + + Y P + +
Sbjct: 141 LLEQGVAGRRVAVQLHGEPLPGFVEALRAGGAEVVPVPVYRWLPPEDPAPLDRLLDAAVS 200
Query: 165 QNADAILFYARSSVLY----------FFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
DAI F + + L C+ A A+ A V
Sbjct: 201 HGLDAITFTSAPAAASLLARAEERGVLDGLLAVLGQEVLAACVGPVTAVALQARGVTTV 259
>gi|237756153|ref|ZP_04584723.1| uroporphyrinogen-III synthase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691679|gb|EEP60717.1| uroporphyrinogen-III synthase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 131
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 4/131 (3%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I+ITR ++ K G+ P+ PL F + + Y + TS +
Sbjct: 1 MKNIIITREASGFEEVKDLFIKAGFNPISFPLIRFEPVE--IKNLNLEDYEYLIFTSKNA 58
Query: 60 LSTLPANFCRHT-PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ + + I A+GE +A + G+ I + S K+ E+ + K
Sbjct: 59 VKYFFSQISKIDKKIIAVGEKTAKYLEKLGYKDIIVPEVFSAEGLKVYFEKNIDTFKDKK 118
Query: 119 LIYLGGKPRNF 129
+ +
Sbjct: 119 MALIRASEGMD 129
Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 33/109 (30%), Gaps = 6/109 (5%)
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
K +I +D I+ + + L++ + ++F ++
Sbjct: 1 MKNIIITREASGFEEVKDLFIKAGFNPISFPLIRFEPV----EIKNLNLEDYEYLIFTSK 56
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
++V YFFS I + + A + + V L
Sbjct: 57 NAVKYFFSQISK--IDKKIIAVGEKTAKYLEKLGYKDIIVPEVFSAEGL 103
>gi|218662286|ref|ZP_03518216.1| uroporphyrinogen-III synthase [Rhizobium etli IE4771]
Length = 105
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M +++TRP A +T ++++ MG+ P+++PL HD + A+ + GAIA+TS+E++
Sbjct: 1 MRVLVTRPAHSAEKTAQRLRDMGHEPLLLPLRRPQHDSAAAASALAATRGAIAVTSAEAM 60
Query: 61 STLPANF-----CRHTPIFAIGEASACL 83
L A PIFA+GE +A
Sbjct: 61 RVLSALGETLGSHLDRPIFAVGEMTAQA 88
>gi|260904041|ref|ZP_05912363.1| Uroporphyrinogen III synthase HEM4 [Brevibacterium linens BL2]
Length = 288
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/245 (8%), Positives = 55/245 (22%), Gaps = 33/245 (13%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAIT 55
+V+T +KA + +++ G V P I + + L + + +T
Sbjct: 16 RVVLT-AQRKAEQFATALERHGAAIVHAPTLSVIPNVDDPELVARTRALIDTHPDIVVVT 74
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + ++ + E +
Sbjct: 75 TGVGFNGWAEVAEAEGLSEQWHAMLTGAQIIARGPKARGAIQSAGLTPAWVAESETNSEI 134
Query: 116 QK----------PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE----TTMK 161
Q+ + ++ + + Y P+
Sbjct: 135 QQVLLEQGVRGLRIAVQHHGAGADGLDEAFSAAGAEVSSLVVYRWGPAPDPDAVVAAVEL 194
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKI------------SAAFLCLSNNIASAIPASY 209
+ DA+ F + V F + + N A+ +
Sbjct: 195 VANRRCDAVAFTSAPGVTAFLDAARDQGLLPEVLEAFSDEDGVLSAVVGNVTAAPLLEHG 254
Query: 210 KNVVT 214
+
Sbjct: 255 IEPLI 259
>gi|298207312|ref|YP_003715491.1| Uroporphyrinogen-III synthase [Croceibacter atlanticus HTCC2559]
gi|83849948|gb|EAP87816.1| Uroporphyrinogen-III synthase [Croceibacter atlanticus HTCC2559]
Length = 217
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 82/223 (36%), Gaps = 24/223 (10%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
++TR +E + G+ V + S+ ++ TS +++ +
Sbjct: 9 ILTRSQ------RELVLNTGFGLVEYNAINISFTKVSLPKRIENG----IFTSQNAVAAI 58
Query: 64 PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLG 123
+F +G+ + G+ + H + + + ++ + P+ +
Sbjct: 59 KDKNIEIERVFCVGQNTRKALENLGYNVMLHAEHSRA-----LGQKITIQYPEATFTFFC 113
Query: 124 GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFS 183
G R + L +H I L I+ Y + +K + +AI+ ++ S V +F
Sbjct: 114 GNKRRDALPELLHKHNINLTEIEVYKT------SLNIKEFQRTFNAIMCFSPSGVQSYFG 167
Query: 184 LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
P K +C+ N A+A Y + + +A S++
Sbjct: 168 ANKPQKE--TIVCIGNTTATAAK-LYTDQIAIANTTSIESVIA 207
>gi|295131994|ref|YP_003582670.1| uroporphyrinogen-III synthase [Zunongwangia profunda SM-A87]
gi|294980009|gb|ADF50474.1| uroporphyrinogen-III synthase [Zunongwangia profunda SM-A87]
Length = 216
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 69/206 (33%), Gaps = 20/206 (9%)
Query: 22 MGYIP--VMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEA 79
+G V S + + ++ ITS + + R F +G
Sbjct: 19 LGAKIGLVEYNAINIEFLPISSNIDLAENA---IITSKNAFKAIQEKI-RIKKAFVVGSK 74
Query: 80 SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHK 139
+A L ++ + + A + ++ ++ K I+ G R L +HK
Sbjct: 75 TAALLQKNDIEVVEVADN-----ALALAKKIIVNHRDKHFIFFCGNKRREELPLQLKQHK 129
Query: 140 IPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSN 199
I I Y + Q D ILF++ S V +F + A C+
Sbjct: 130 ISFEEIQVYKT------SLNFAKFKQEFDGILFFSPSGVESYFR--KNTIVEATAFCIGA 181
Query: 200 NIASAIPASYKNVVTVACFPKETSLL 225
A+++ + +A P +++
Sbjct: 182 TTANSVKKH-TENIKIANQPSIENVI 206
>gi|163754811|ref|ZP_02161933.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1]
gi|161325752|gb|EDP97079.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1]
Length = 526
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 19/180 (10%)
Query: 52 IAITSSESLSTLPANFC----RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ ITS ++ L NF + I+ +G + L QK +++ K++
Sbjct: 355 VVITSKNAVEALVQNFSSEELQFQNIYCVGRRTKKLIEQKIGPVAKSARNS-----KLLA 409
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
E V + + Y R L E+ I + + Y + +++ ++
Sbjct: 410 EHLVEYMEGTTVTYFCSDIRLDALPTILEENHIQVTEVHAYKTI---LDAEKLQDGIE-- 464
Query: 168 DAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
++FY+ S+V + S I C+ A V VA P S+++L
Sbjct: 465 -GVMFYSPSTVKSYISANKAKGI---AYCIGETTAKEARQH-FEDVRVAKLPTVESVIEL 519
>gi|182438369|ref|YP_001826088.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178466885|dbj|BAG21405.1| putative transcriptional regulator [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 380
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/238 (9%), Positives = 54/238 (22%), Gaps = 35/238 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP 64
+T ++A +++ G + P + + L + + +
Sbjct: 18 VT-AARRAEELATLLERRGAAVLHAPALRIVQLADDSELLAATR--ELIGHAPDVAVATT 74
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQ------------------IFHGKDNSINLAKII 106
A R A G + S ++A+++
Sbjct: 75 AIGFRGWIEAADGWGVGDALLKTLGGVELLARGPKVKGAVRAAGLTETWSPGSESMAEVL 134
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+ + F + L + V+ Y +
Sbjct: 135 DRLLAQGVAGRRIALQLHGEPLPGFVESLTAAGADVVVVPVYRWMPPRDIAPLDRMLDVT 194
Query: 163 LLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYK 210
+ DAI F + + F + + C+ A + A
Sbjct: 195 AARGLDAITFTSAPAAASFLGRAETRGLLPEILGALRDDVLVACVGPVTALPLQARGI 252
>gi|312200075|ref|YP_004020136.1| uroporphyrin-III C-methyltransferase [Frankia sp. EuI1c]
gi|311231411|gb|ADP84266.1| uroporphyrin-III C-methyltransferase [Frankia sp. EuI1c]
Length = 583
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/231 (10%), Positives = 64/231 (27%), Gaps = 11/231 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVM--MPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++ R ++ +++ G V + + D + A+ + + + E
Sbjct: 345 RVLVPRTRQRPGLLARDLRRQGADAVETVVSTLAPVPDASGLLAALPGADALVLADADEV 404
Query: 60 LSTLPANFCRHTPIFAIGEAS-ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ + + A+ + + G + A++ V V+
Sbjct: 405 TTVVTLLRGAGQDVRALAGLTLVSASDSAAVALESLGLATVRSSAEVRVAHVVVT----- 459
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYARS 176
+ + + A P+ ++ L+ A+ F + +
Sbjct: 460 -EIPVTGLKVAVCASAAPPMGVRTVRRITLQTDIPAEPDPSVAADLRRGALHAVAFASST 518
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ L P + + A + V VA P L+
Sbjct: 519 AARRTAELYGPLPPGLLVVAMGRRTVLACEETGIRVDAVANEPGIAGLVTA 569
>gi|215425475|ref|ZP_03423394.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis T92]
gi|289748742|ref|ZP_06508120.1| transcriptional regulator [Mycobacterium tuberculosis T92]
gi|289689329|gb|EFD56758.1| transcriptional regulator [Mycobacterium tuberculosis T92]
Length = 381
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/265 (8%), Positives = 52/265 (19%), Gaps = 41/265 (15%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T ++A +++ G P I + L +
Sbjct: 13 RIAVT-SARRAEELCALLRRQGAEVCSAPAIKMIALPDDDELQNNTEALIADPPDILVAH 71
Query: 56 SSESLSTLPANFCRHTPIF----------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A I + +S + ++
Sbjct: 72 TGIGFRGWLAAAEGWGLANELLESLSSARIISRGPKATGALRAAGLREEWSPDSESSHEV 131
Query: 106 IVEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIA----YP 156
+ + + F L + I Y + +
Sbjct: 132 LEYLLESGVSRTRIAVQLHGAADSWDPFPEFLGGLRFAGAQVVPIRVYRWKPAPLGGVFD 191
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIP 206
+ DA+ F + + L + +C+ + +
Sbjct: 192 HLVTAIARRQFDAVTFTSAPAAAAVLERSRELDIEDQLLAALRTDVHAMCVGPVTSRPLI 251
Query: 207 ASYKNVVTVACFPKETSLLKLLPLR 231
V E L L
Sbjct: 252 RKG-----VPTSAPERMRLGALARH 271
>gi|332184483|gb|AEE26737.1| uroporphyrinogen-III synthase [Francisella cf. novicida 3523]
Length = 249
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 60/161 (37%), Gaps = 11/161 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A+ EK+ G + + +P + + + + Y ++ TS ++
Sbjct: 1 MKILVCRPQDDAVSLTEKLCTKGLLALSLPTIKICYQKITESVL---DYTSLVFTSKYAV 57
Query: 61 STLPAN----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L + ++ I+++G ++A + ++ I+ S L II++ +
Sbjct: 58 KSLFSQYPIGLFKNKKIYSVGASTAAILKKYQLDAIYPASHGSQELLSIILQGDISTEKF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ + G L + Y I E
Sbjct: 118 AIISGVAGNNLLLEELSKLT----QCHKFETYSRVFIDLDE 154
>gi|269793436|ref|YP_003312891.1| uroporphyrinogen-III synthase [Sanguibacter keddieii DSM 10542]
gi|269095621|gb|ACZ20057.1| uroporphyrinogen-III synthase [Sanguibacter keddieii DSM 10542]
Length = 377
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 68/260 (26%), Gaps = 40/260 (15%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I +T +++ +++ G + P E V L AI T + +
Sbjct: 22 RIGVT-SDRRSDDLIAALERRGAQVMHAPALRIAPVEEDVDL--LADTRAILETPPDVMV 78
Query: 62 TLPANFCRHT--------------------PIFAIGEASACLARQKGFTQIFHGKDNSIN 101
A R IF G + R G + D +
Sbjct: 79 VTTAYGMRRWSEAADAAGLGDPLTEVLQASRIFVRGPKARGAVRAAGLDDVGIAHDERTS 138
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
++ + + + + + L + ++ Y E +
Sbjct: 139 SVIDMLLDEGVDG--LTVAVQLHGYTDGQQLERLRAGGARVLTVEPYRWVKPDGAERLPR 196
Query: 162 N----LLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPA 207
+N D + F + +V F L + + A +
Sbjct: 197 LIDAVCSRNLDVVTFTSAPAVDAFLTSAIEQGVLDQLLDALRTDVVAAAVGPVTAGPLEV 256
Query: 208 SYKNVVTVACFPKETSLLKL 227
+ + + + +L++L
Sbjct: 257 AGVTPI-IPERFRMGALIRL 275
>gi|332665522|ref|YP_004448310.1| Uroporphyrinogen III synthase HEM4 [Haliscomenobacter hydrossis DSM
1100]
gi|332334336|gb|AEE51437.1| Uroporphyrinogen III synthase HEM4 [Haliscomenobacter hydrossis DSM
1100]
Length = 259
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/238 (11%), Positives = 68/238 (28%), Gaps = 17/238 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITSSES 59
I++++P + E ++ P S+ F + AI ++S S
Sbjct: 18 ILVSQPKPERSPYYELEKRYNLQIDWRPFSHVEGLEAKDFRKQRIRPDEFTAIILSSKNS 77
Query: 60 LSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ F + E A ++ + + ++ ++ +
Sbjct: 78 VDHFFRLCEEMRVKMSPETKYFCLTETIANYLQKFILYRKRKVFVGTRSIEELGA--YLK 135
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ + +L + + + Y++ + D ++F
Sbjct: 136 KHKGEKFLLPCSNLGAKEITKFLDDMNLDWKDAIMYHTVSSDLSD----LSDVTYDVLVF 191
Query: 173 YARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
++ + + K + N A+ NV A P+ S+ K L
Sbjct: 192 FSPLCIQSLYDNFPDFKQNDTRIAVYGNLTRQAVEDRGLNVNINAPAPEVPSMTKALE 249
>gi|307747982|gb|ADN91252.1| uroporphyrinogen III cosynthase [Campylobacter jejuni subsp. jejuni
M1]
Length = 209
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 61/208 (29%), Gaps = 16/208 (7%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL-PANFCRHTPIFAIGEASACLA 84
+ L+ + S+ L++ Y A+ TS +L L A + + +
Sbjct: 14 VENLILNEIVFYDFSIDLSL---YDALICTSKNALKALQHAKITLNFKLNLYAVGQSTAQ 70
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
K + + +E + +YL K L + L
Sbjct: 71 YAKNLGFKKIKIPSKAYGKDLFLE-FKEELKTQKCLYLRAKNIVSTLNLDLKNAGMDLDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y + + L + +F + SV F + + + + A
Sbjct: 130 VIVYENVFKKGNKK-----LTHPAIFIFTSPLSVENFLKFYSLKEED-KVVVIGQSTAKK 183
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + SLL+ + L +
Sbjct: 184 L--LNFKNLYICE---NQSLLECVKLAK 206
>gi|150024292|ref|YP_001295118.1| hypothetical protein FP0182 [Flavobacterium psychrophilum JIP02/86]
gi|149770833|emb|CAL42298.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 249
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 58/246 (23%), Gaps = 22/246 (8%)
Query: 1 MY---IVITRPIK--KALRTQEKIQKMGYIPVMMPLSYFIHDRESV---FLAMQQSYGAI 52
M I++++P + E K P + ++ AI
Sbjct: 1 MKVKTILVSQPEPKVENSPYFELQNKHKVKIDFRPFIHVEGVLAKDVRTQKIDLNNFTAI 60
Query: 53 AITSSESLSTLPANFCRHT-------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+TS S+ F EA A ++ + + +
Sbjct: 61 ILTSKNSVDHFFRVAEEMRYKVPEDLKYFCQSEAVAFYLQKYVVYRKRKIYVGQKDFVDM 120
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
K + + N L K+ Y + +
Sbjct: 121 STLFKKY--KDEKYLLPSSDQLNADITQTLNNLKVDWIAGTFYKTVMSDLSD----LKDV 174
Query: 166 NADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
D + F++ + + F + + + +A P+ S+
Sbjct: 175 YYDVLAFFSPTGIKSLFKNFPNFEQKDTRIAVFGSTTQKEALEHGLRIDILAPTPETPSM 234
Query: 225 LKLLPL 230
L
Sbjct: 235 TMALEK 240
>gi|282865180|ref|ZP_06274233.1| Uroporphyrinogen III synthase HEM4 [Streptomyces sp. ACTE]
gi|282560103|gb|EFB65652.1| Uroporphyrinogen III synthase HEM4 [Streptomyces sp. ACTE]
Length = 381
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 61/241 (25%), Gaps = 35/241 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSE 58
+T ++A + + G + P + + L + + T++
Sbjct: 18 VT-AARRAEELGTLLTRRGAAVLHAPALRIVPLADDSELLAATEELLDDVPDVVIATTAI 76
Query: 59 SLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ A G R G T+ + S ++A+++
Sbjct: 77 GFRGWVEAADGWGIGDRLLEVLRGGELLARGPKVKGAIRAAGLTEAWSP--GSESMAEVL 134
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+ + F D L E + + Y +
Sbjct: 135 DRLLGEGVEGRRIALQLHGEPLPGFVDALREAGAEVVGVPVYRWMPPQDIAPLDRMLDVT 194
Query: 163 LLQNADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYKNV 212
+ + DA+ F + + + + + C+ A + A +
Sbjct: 195 VARGLDALTFTSAPAAASYLNRAESRGMLPQVLSALGHDVVVACVGPVTALPLQARGIDT 254
Query: 213 V 213
V
Sbjct: 255 V 255
>gi|228993203|ref|ZP_04153124.1| Uroporphyrinogen III synthase HEM4 [Bacillus pseudomycoides DSM
12442]
gi|228766529|gb|EEM15171.1| Uroporphyrinogen III synthase HEM4 [Bacillus pseudomycoides DSM
12442]
Length = 162
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 38/135 (28%), Gaps = 8/135 (5%)
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
++E + +++ G + L + + L Y ++ + +
Sbjct: 24 EAFVLEFVRELNGTERILFPKGNLARDIIPNKLRDLDVFLEEFVVYETKTNHEKQLDLIA 83
Query: 163 LLQ--NADAILFYARSSVLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTV 215
L+ D + F + S+V F L C+ V V
Sbjct: 84 ALELGKVDVVTFTSPSTVTSFVKLLEGTNWREWTKKCTIACIGPITEQEARRY-FAGVIV 142
Query: 216 ACFPKETSLLKLLPL 230
+L++ +
Sbjct: 143 PKEYTVEALIQCISK 157
>gi|145596382|ref|YP_001160679.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Salinispora tropica CNB-440]
gi|145305719|gb|ABP56301.1| Uroporphyrinogen III synthase HEM4 [Salinispora tropica CNB-440]
Length = 362
Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/244 (7%), Positives = 55/244 (22%), Gaps = 29/244 (11%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITSSESLSTLPAN 66
+Q+ G V P + + L + + + + +
Sbjct: 19 DELAALLQRHGARVVFAPALRIVPLADDTELRAATRACLDRPPDVLMADTGIGMRGWLEA 78
Query: 67 FCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVEQKVLFTPQ 116
+ A + S + A+++ +
Sbjct: 79 AEGWGLAEPLRTALREAYVVARGPKARGAIRAAGLHDQWSPASESCAEVVAHLRDRGVAG 138
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN----LLQNADAILF 172
+ + + L+ + + Y P + + + DA+ F
Sbjct: 139 QVVAMQLHGGQQPECTQALVAAGATVIAVPVYRWAPPTDPAPLHRLIDLVIDRMVDAVTF 198
Query: 173 YARSSVLYFFSLPLP--------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + + + C+ A + V + +L
Sbjct: 199 TSAPAAEALLRAAGDRVDQVLDAFRSAVLASCVGTVTAEPLRRRGVPVSA-PERARLGAL 257
Query: 225 LKLL 228
++ +
Sbjct: 258 VRTI 261
>gi|317013007|gb|ADU83615.1| uroporphyrinogen-III synthase [Helicobacter pylori Lithuania75]
Length = 226
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + + A + + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNNPKLKTLQNIPAYALSEPTAKTLQDHHFKTAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEILPLLKGKSVLYLRVKEIASSLDTILLEHGINFQQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F + + + N A + +A
Sbjct: 150 EQNALKPKEKSVLIFTAISHAKAFLHYFEFLENYTAISIGNTTAHYLQEKGIPS-YIAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|29831663|ref|NP_826297.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces avermitilis MA-4680]
gi|29608779|dbj|BAC72832.1| putative transcriptional regulator [Streptomyces avermitilis
MA-4680]
Length = 386
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 61/241 (25%), Gaps = 35/241 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSE 58
+T ++A +Q+ G V P + + L Q+ + T++
Sbjct: 23 VT-AARRADELGALLQRRGASVVHAPALRIVPLADDSELLAATKGLIEQAPDVVVATTAI 81
Query: 59 SLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ A G R G T+ + S ++A+++
Sbjct: 82 GFRGWIEAADGWGLGEDLIERLRGVELLARGPKVKGAVRAAGLTEEWSPS--SESMAEVL 139
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+ + F + L + + Y +
Sbjct: 140 DRLLEEGVDGRRVAIQLHGEPLPGFVEALRAGGAEVVGVPVYRWMPPEDITPVDRLLDAT 199
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNV 212
+ + DAI F + + S + C+ A + A +
Sbjct: 200 VTRGLDAITFTSAPAAASLLSRAEERGLLSDVLAALHHDVLPACVGPVTALPLQARGVDT 259
Query: 213 V 213
V
Sbjct: 260 V 260
>gi|302560385|ref|ZP_07312727.1| uroporphyrinogen-III synthase [Streptomyces griseoflavus Tu4000]
gi|302478003|gb|EFL41096.1| uroporphyrinogen-III synthase [Streptomyces griseoflavus Tu4000]
Length = 321
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 57/241 (23%), Gaps = 35/241 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS------YGAIAITSSE 58
+T ++A +++ G + + P + + L T++
Sbjct: 50 VT-AARRADELGALLERRGAVVLHAPALRIVPLADDSELLAATKDIIGQVPDIAVATTAI 108
Query: 59 SLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
I A G R G T+ + S +LA+++
Sbjct: 109 GFRGWVEAADGWGLGEDLLARLRGVRILARGPKVKGAIRAAGLTEEWSPA--SESLAEVL 166
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--- 163
+ F + L + + Y + +
Sbjct: 167 DRLLEEGVDGLRIAVQLHGEPLPGFVESLRAGGAEVVGVPVYRWLPPEDLGPVDRLIDAT 226
Query: 164 -LQNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNV 212
+ D + F + + S + C+ A + A +
Sbjct: 227 VARALDTVTFTSAPAAASLLSRAGERGLLDELVAALGHDVLPACVGPVTALPLQARGIDT 286
Query: 213 V 213
V
Sbjct: 287 V 287
>gi|293366382|ref|ZP_06613061.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319507|gb|EFE59874.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733757|gb|EGG70083.1| uroporphyrinogen-III synthase [Staphylococcus epidermidis VCU045]
Length = 226
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/209 (11%), Positives = 52/209 (24%), Gaps = 7/209 (3%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLA 84
+ P + L + SY + +S ++
Sbjct: 19 DIIHKPFIQLKQLHFNEKL-LDHSYDWLIFSSKNAVKYFYPYLKNVKVKKVAVIGDKTAQ 77
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+ + E K+ + L+ + L ++ +++
Sbjct: 78 YCNELGISVDFVPRDFSQEGFLDEFKISE---QHLLLPSSEKARSKLVQQLSKYNEVVKI 134
Query: 145 IDCYYSQDIAYPETTM-KNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIAS 203
+ DA+ F + S+V ++F + + + A
Sbjct: 135 DLYRPVPNFKNISQVKSLVRKHQIDAVTFSSSSAVEFYFKEDNVPEFD-HYFAIGKQTAR 193
Query: 204 AIPASYKNVVTVACFPKETSLLKLLPLRR 232
I V VA SL+ + R
Sbjct: 194 TILKFN-TSVKVANKQTLDSLIDKIIESR 221
>gi|320010503|gb|ADW05353.1| Uroporphyrinogen III synthase HEM4 [Streptomyces flavogriseus ATCC
33331]
Length = 385
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 60/241 (24%), Gaps = 35/241 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSE 58
+T ++A + + G + P + + L + T++
Sbjct: 18 VT-AARRAEELGTLLTRRGAAVLHAPALRIVPLADDSELLAATKDLVDNPPDVVIATTAI 76
Query: 59 SLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ A G R G T+ + + S ++A+++
Sbjct: 77 GFRGWVEAADGWGIGDELLELLRGIELLARGPKVKGAIRAAGLTEAWSPQ--SESMAEVL 134
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-- 164
+ + F + L + + Y + L
Sbjct: 135 DRLLEEGVTGRRIALQLHGEPLPGFVESLRAAGAEIVGVPVYRWMPPEDIAPLDRMLDAT 194
Query: 165 --QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNV 212
+ DA+ F + +V + + C+ A + A +
Sbjct: 195 VGRGLDALTFTSAPAVASYLNRAETRGILPEVLDALGHDVLTACVGPVTALPLQAKGIDT 254
Query: 213 V 213
V
Sbjct: 255 V 255
>gi|296282338|ref|ZP_06860336.1| uroporphyrinogen-III synthase [Citromicrobium bathyomarinum JL354]
Length = 246
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 72/252 (28%), Gaps = 39/252 (15%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+ + RP T + +K G MPLS+ V + ++ I + S+ +L
Sbjct: 5 VFVLRPEPGLSATLARGRKRGLAMEAMPLSHAEAVAWQV---PEGAFDGILLGSANALRH 61
Query: 63 LPA----------------------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI 100
+ P++A+G+A+A A F G+
Sbjct: 62 AEKGTDEDAGRISETMGGSAADTGLDMLPRLPVYAVGKATAQAACSLRFPIAQVGEGGLQ 121
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
L + + + + Y A +
Sbjct: 122 KLLDTLARDAP---------LRLLRLAGEDRMTLSPPEGVTIETCTTYRIVHRALDDQD- 171
Query: 161 KNLLQNADAILFYARSSVLYF---FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
L+ +L ++ + +F + + L+ IAS V VA
Sbjct: 172 AARLREGGVVLLHSGVAARHFAAECERAGVDRAKLSLAALAPRIASHASD-GWKNVAVAP 230
Query: 218 FPKETSLLKLLP 229
+ +LL L+
Sbjct: 231 ETSDAALLSLVA 242
>gi|319902573|ref|YP_004162301.1| hypothetical protein Bache_2772 [Bacteroides helcogenes P 36-108]
gi|319417604|gb|ADV44715.1| hypothetical protein Bache_2772 [Bacteroides helcogenes P 36-108]
Length = 272
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 67/247 (27%), Gaps = 32/247 (12%)
Query: 3 IVITRPIKKALRTQEKI----QKMG--YIPVMMPLSYF----IHDRESVFLAMQQSYGAI 52
I+IT P A R +E + G + P +P+ F+ + S+ I
Sbjct: 7 ILITAPEGYAQRFREALLSVSNSSGKLFKPTCIPMIETVVAYESPTFKAFMEIIGSFDYI 66
Query: 53 AITSSESLSTLPANF-----CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+S +++ + A + ++ + + A I+
Sbjct: 67 VFSSRKAIEAVAAYHTVANRKLPEKMKCCAIGKDNEFLEECLGIHPSFIPDEPSPAGIVR 126
Query: 108 EQKVLFTPQKP--------LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
+ + + + + F L + + I Y ++ + +
Sbjct: 127 KFSKIAGIEGKRVAVLAPLVTGMEEPDTVPLFMKALHDIGMVADRIPAYITRATIHSKQK 186
Query: 160 MKNLL---QNADAILFYARSSVLYFFSLPLPAK------ISAAFLCLSNNIASAIPASYK 210
+ L ++ I F + + + P + C A
Sbjct: 187 QIHQLILSRHFRCIAFSSGAEIKALLESLSPEESITDFFFGIDIACFGPYTADYARKQGL 246
Query: 211 NVVTVAC 217
V A
Sbjct: 247 PVCLTAK 253
>gi|323357158|ref|YP_004223554.1| uroporphyrinogen-III synthase [Microbacterium testaceum StLB037]
gi|323273529|dbj|BAJ73674.1| uroporphyrinogen-III synthase [Microbacterium testaceum StLB037]
Length = 379
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/248 (7%), Positives = 53/248 (21%), Gaps = 32/248 (12%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITSSESLSTLP 64
++ +++ G + P + + L + + T+
Sbjct: 24 RSGELSAALERHGARVRVAPALTIVPHVDDEELIAQTRALVDDPPDVVVATTGVGFRAWM 83
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK----------VLFT 114
A+ + + A + E +
Sbjct: 84 ETADEAGLHDALAPVLDAARIVARGPKARGAIQQAGFEADWVAESETAAELRDFLVAEGI 143
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----NADAI 170
+ ++ + + Y PE + Q DA+
Sbjct: 144 DGLHVAVQHHGSGADGLDEAFEAAGARVTSLTIYRWGPPPDPEVVAASTQQVARGEIDAV 203
Query: 171 LFYARSSVLYFFSLP-----------LPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
LF + + + A+ + A + + +
Sbjct: 204 LFTSAPAAREWIVAAERADALDGVASRAARGHVLVAAVGPITAGPLIEAGIPP-LIPDRG 262
Query: 220 KETSLLKL 227
+ +L++
Sbjct: 263 RLGALVRA 270
>gi|289644379|ref|ZP_06476461.1| delta-aminolevulinic acid dehydratase [Frankia symbiont of Datisca
glomerata]
gi|289505817|gb|EFD26834.1| delta-aminolevulinic acid dehydratase [Frankia symbiont of Datisca
glomerata]
Length = 986
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+++ R ++A + ++ G P+ +P R + + Y +A TS
Sbjct: 350 VLVPRTKEQAAILSDLLRSHGASPLEVPTIAVEPPRTAAPMERAITGLVSGRYQWVAFTS 409
Query: 57 SESLSTLPA 65
++ +
Sbjct: 410 VNAVRAVQE 418
Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 16/68 (23%), Gaps = 7/68 (10%)
Query: 166 NADAILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASYKNVVTV-ACF 218
+ F + ++V + + A A+ A V +
Sbjct: 401 RYQWVAFTSVNAVRAVQEKVEERSLDARAFAGVKVAAIGEATADALRAFGIRPDLVPSGQ 460
Query: 219 PKETSLLK 226
LL
Sbjct: 461 QSSEGLLA 468
>gi|288917174|ref|ZP_06411543.1| uroporphyrin-III C-methyltransferase [Frankia sp. EUN1f]
gi|288351365|gb|EFC85573.1| uroporphyrin-III C-methyltransferase [Frankia sp. EUN1f]
Length = 503
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/221 (9%), Positives = 59/221 (26%), Gaps = 3/221 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS-YGAIAITSSESL 60
+++ R + +++++G V +S + + L + + ++ +
Sbjct: 267 RVLVPRTRARHSLLARRLRELGAEAVETVVSRLVPATDGAALREALPGADGLVLADADEV 326
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ +A + V+ + P+
Sbjct: 327 AATVTLLRAAGADVRALAGLTLIAASDSAAAALDALGLVSVRSSAEVQVANRVVTEVPVP 386
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
L I +R++ ++ +++ + DA+ + ++
Sbjct: 387 GLRVVICGSAPPPAGIRTLRRVRLLTDVAAEPDPRIAEELRH--GDLDAVALASSTAARC 444
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
F L P + + A A V V P
Sbjct: 445 LFELYGPLPDTVRVAAMGRRTVEACEAVGLRVDAVPAEPGI 485
>gi|148654059|ref|YP_001281152.1| uroporphyrinogen-III synthase-like protein [Psychrobacter sp.
PRwf-1]
gi|148573143|gb|ABQ95202.1| Uroporphyrinogen-III synthase-like protein [Psychrobacter sp.
PRwf-1]
Length = 289
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 52/176 (29%), Gaps = 10/176 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR--------ESVFLAMQQSYGAI 52
M + TRPI++A + +Q G + +PL + F Y A+
Sbjct: 1 MIFINTRPIERAQPLTQAMQDKGLTVLELPLLELTAIEIGQREQQYQQHFYQQPDQYQAL 60
Query: 53 AITSSESLST--LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+ S + I A + H N +++ Q
Sbjct: 61 VVVSPTAARMGLAACPIGFVPRCAVIAVGHATAEVLRVAGWQVHCPVEYSNEGMMLMPQL 120
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
++ G+ ++L E+ + + I Y Q E K LL
Sbjct: 121 NRLGVGNRILVWRGRGGRRVLVNFLQENGVGVDAIAWYQRQCPPQAEHDFKQLLPQ 176
>gi|261838547|gb|ACX98313.1| uroporphyrinogen III cosynthase [Helicobacter pylori 51]
Length = 224
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 58/194 (29%), Gaps = 9/194 (4%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLQILQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I Y ++ E
Sbjct: 90 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASSLDTILLEHGIDFNQAVVYENKLKHLSEQ 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
+ ++F A S F + + + N A + A
Sbjct: 150 NALKPKEK-SILIFTAISHAKAFLHYF-EFLENYTAISIGNTTALYLKEQGIQS-YTAKK 206
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 207 PSLEACLELALSLR 220
>gi|254523518|ref|ZP_05135573.1| uroporphyrinogen-III synthase [Stenotrophomonas sp. SKA14]
gi|219721109|gb|EED39634.1| uroporphyrinogen-III synthase [Stenotrophomonas sp. SKA14]
Length = 269
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 70/235 (29%), Gaps = 16/235 (6%)
Query: 7 RPIKKALRTQEKIQKMGYIPVMMP---LSYFIHDRESVFLAMQQSYGAIAITSSESLST- 62
RP + + + +G + + L L + + TS +++
Sbjct: 26 RPQGQHAALRRAVAGLGGHVLALSPWRLQRLHGTPVVRQLQRALNCDRVVFTSPAAVAAA 85
Query: 63 ---LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
L + +P +GE +A + G +++ + ++ + +
Sbjct: 86 ASLLTLVEAQRSPWLTVGEGTARALQAHGISEVHAPQRMDS--EGLLALPVLANVQDLRI 143
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF--YARSS 177
+ L + D Y + + T+ L +A + + +
Sbjct: 144 GLVTAPGGRGLIAAQLQAAGASIERADVYQRRLLRLAPRTLARLAHSAYPWMLAVSSGEA 203
Query: 178 VLYFFSLPLPAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ +F+ PA A + S+ +A A V A P L+
Sbjct: 204 LQHFWQQLPPALQQRLQAHATAVVASDRLAEQARALGLQHVVRAAGPTTAQLVAA 258
>gi|330470116|ref|YP_004407859.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328813087|gb|AEB47259.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Verrucosispora maris AB-18-032]
Length = 362
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/228 (7%), Positives = 48/228 (21%), Gaps = 28/228 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPAN 66
+Q+ G V+ P + + L + + + +
Sbjct: 19 DELAALLQRRGARVVLAPALRIVPLADDSALREATRACLDRPPDVLMANTGIGMRGWLEA 78
Query: 67 FCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + + S + +++ +
Sbjct: 79 AEGWGVAEPLRSVLSDAYVVARGPKARGAIRAAGLYDQWSPESESCDEVVEHLRQRGVAG 138
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAILF 172
+ + R L E + I Y P + + + DA+ F
Sbjct: 139 QVIAMQLHGDRQPECTRALEEAGATVIEIPVYRWAPPTDPAPLHRLVDLVAGRLVDAVTF 198
Query: 173 YARSSVLYFFSLPLPAKISAAFL--------CLSNNIASAIPASYKNV 212
+ + + C+ A + V
Sbjct: 199 TSAPAAEALLRAAGDRTEAVLAALRSDVLASCVGPVTAEPLVRRGVPV 246
>gi|302348999|ref|YP_003816637.1| hemD uroporphyrinogen-III synthase [Acidilobus saccharovorans
345-15]
gi|302329411|gb|ADL19606.1| hemD uroporphyrinogen-III synthase [Acidilobus saccharovorans
345-15]
Length = 224
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 60/207 (28%), Gaps = 10/207 (4%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLAR 85
++PL R + ++ Y +A S S L P A A
Sbjct: 21 VEILPL--PEALRAAAEYVVRGDYDCVAFLSPRSPRFLRQFMSSWPPNVRAFAVGASTAA 78
Query: 86 QKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ + E + + + ++ L + + E+ L E I + +
Sbjct: 79 SVREAFGIDAPYPETYSSGGLAEL-IKLSHCRRVLSLRSEAGDHELEEKLREAGIEVNRV 137
Query: 146 DCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAI 205
D Y + + I+ + + P A + + ASA+
Sbjct: 138 DVYREVPADIDINELASRFD---LIIVSSAEIARISCNHVRPYLGDAIVIAMGPKAASAV 194
Query: 206 PAS-YKNVVTVACFPKETS---LLKLL 228
+ + + V + LLK L
Sbjct: 195 SSMCPEARLLVPSRYTFNAIGELLKAL 221
>gi|15607401|ref|NP_214774.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis H37Rv]
gi|15839642|ref|NP_334679.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis CDC1551]
gi|31791438|ref|NP_853931.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium bovis AF2122/97]
gi|121636173|ref|YP_976396.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660025|ref|YP_001281548.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis H37Ra]
gi|148821455|ref|YP_001286209.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain-containing protein [Mycobacterium tuberculosis
F11]
gi|167968984|ref|ZP_02551261.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis H37Ra]
gi|215406258|ref|ZP_03418439.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis 02_1987]
gi|215409749|ref|ZP_03418557.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis 94_M4241A]
gi|215433178|ref|ZP_03431097.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis EAS054]
gi|218755999|ref|ZP_03534795.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis GM 1503]
gi|219556065|ref|ZP_03535141.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis T17]
gi|224988646|ref|YP_002643333.1| uroporphyrinogen-III synthetase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253797185|ref|YP_003030186.1| transcriptional regulator [Mycobacterium tuberculosis KZN 1435]
gi|254233637|ref|ZP_04926963.1| posible transcriptional regulatory protein [Mycobacterium
tuberculosis C]
gi|254366704|ref|ZP_04982748.1| posible transcriptional regulatory protein [Mycobacterium
tuberculosis str. Haarlem]
gi|254549200|ref|ZP_05139647.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185123|ref|ZP_05762597.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis CPHL_A]
gi|260199257|ref|ZP_05766748.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis T46]
gi|260203403|ref|ZP_05770894.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis K85]
gi|289441637|ref|ZP_06431381.1| transcriptional regulator [Mycobacterium tuberculosis T46]
gi|289445793|ref|ZP_06435537.1| transcriptional regulator [Mycobacterium tuberculosis CPHL_A]
gi|289552513|ref|ZP_06441723.1| transcriptional regulator [Mycobacterium tuberculosis KZN 605]
gi|289568169|ref|ZP_06448396.1| transcriptional regulator [Mycobacterium tuberculosis T17]
gi|289572838|ref|ZP_06453065.1| transcriptional regulator [Mycobacterium tuberculosis K85]
gi|289748030|ref|ZP_06507408.1| uroporphyrinogen-III synthetase [Mycobacterium tuberculosis
02_1987]
gi|289756327|ref|ZP_06515705.1| transcriptional regulatory protein [Mycobacterium tuberculosis
EAS054]
gi|289764378|ref|ZP_06523756.1| possible transcriptional regulatory protein [Mycobacterium
tuberculosis GM 1503]
gi|294994734|ref|ZP_06800425.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis 210]
gi|297632740|ref|ZP_06950520.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis KZN 4207]
gi|297729714|ref|ZP_06958832.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis KZN R506]
gi|298523728|ref|ZP_07011137.1| transcriptional regulatory protein [Mycobacterium tuberculosis
94_M4241A]
gi|306774350|ref|ZP_07412687.1| transcriptional regulator [Mycobacterium tuberculosis SUMu001]
gi|306779092|ref|ZP_07417429.1| transcriptional regulator [Mycobacterium tuberculosis SUMu002]
gi|306782881|ref|ZP_07421203.1| transcriptional regulator [Mycobacterium tuberculosis SUMu003]
gi|306787250|ref|ZP_07425572.1| transcriptional regulator [Mycobacterium tuberculosis SUMu004]
gi|306791804|ref|ZP_07430106.1| transcriptional regulator [Mycobacterium tuberculosis SUMu005]
gi|306795847|ref|ZP_07434149.1| transcriptional regulator [Mycobacterium tuberculosis SUMu006]
gi|306801845|ref|ZP_07438513.1| transcriptional regulator [Mycobacterium tuberculosis SUMu008]
gi|306806055|ref|ZP_07442723.1| transcriptional regulator [Mycobacterium tuberculosis SUMu007]
gi|306970451|ref|ZP_07483112.1| transcriptional regulator [Mycobacterium tuberculosis SUMu009]
gi|306974682|ref|ZP_07487343.1| transcriptional regulator [Mycobacterium tuberculosis SUMu010]
gi|307082392|ref|ZP_07491562.1| transcriptional regulator [Mycobacterium tuberculosis SUMu011]
gi|307082735|ref|ZP_07491848.1| transcriptional regulator [Mycobacterium tuberculosis SUMu012]
gi|313657040|ref|ZP_07813920.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis KZN V2475]
gi|1850105|emb|CAB06687.1| POSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN [Mycobacterium
tuberculosis H37Rv]
gi|13879761|gb|AAK44493.1| transcriptional regulator, putative [Mycobacterium tuberculosis
CDC1551]
gi|31617023|emb|CAD93130.1| POSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121491820|emb|CAL70282.1| Posible transcriptional regulatory protein [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124603430|gb|EAY61705.1| posible transcriptional regulatory protein [Mycobacterium
tuberculosis C]
gi|134152216|gb|EBA44261.1| posible transcriptional regulatory protein [Mycobacterium
tuberculosis str. Haarlem]
gi|148504177|gb|ABQ71986.1| uroporphyrinogen-III synthetase [Mycobacterium tuberculosis H37Ra]
gi|148719982|gb|ABR04607.1| transcriptional regulatory protein [Mycobacterium tuberculosis F11]
gi|224771759|dbj|BAH24565.1| uroporphyrinogen-III synthetase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253318688|gb|ACT23291.1| transcriptional regulator [Mycobacterium tuberculosis KZN 1435]
gi|289414556|gb|EFD11796.1| transcriptional regulator [Mycobacterium tuberculosis T46]
gi|289418751|gb|EFD15952.1| transcriptional regulator [Mycobacterium tuberculosis CPHL_A]
gi|289437145|gb|EFD19638.1| transcriptional regulator [Mycobacterium tuberculosis KZN 605]
gi|289537269|gb|EFD41847.1| transcriptional regulator [Mycobacterium tuberculosis K85]
gi|289541922|gb|EFD45571.1| transcriptional regulator [Mycobacterium tuberculosis T17]
gi|289688558|gb|EFD56046.1| uroporphyrinogen-III synthetase [Mycobacterium tuberculosis
02_1987]
gi|289696914|gb|EFD64343.1| transcriptional regulatory protein [Mycobacterium tuberculosis
EAS054]
gi|289711884|gb|EFD75900.1| possible transcriptional regulatory protein [Mycobacterium
tuberculosis GM 1503]
gi|298493522|gb|EFI28816.1| transcriptional regulatory protein [Mycobacterium tuberculosis
94_M4241A]
gi|308217182|gb|EFO76581.1| transcriptional regulator [Mycobacterium tuberculosis SUMu001]
gi|308327941|gb|EFP16792.1| transcriptional regulator [Mycobacterium tuberculosis SUMu002]
gi|308332401|gb|EFP21252.1| transcriptional regulator [Mycobacterium tuberculosis SUMu003]
gi|308336048|gb|EFP24899.1| transcriptional regulator [Mycobacterium tuberculosis SUMu004]
gi|308339782|gb|EFP28633.1| transcriptional regulator [Mycobacterium tuberculosis SUMu005]
gi|308343789|gb|EFP32640.1| transcriptional regulator [Mycobacterium tuberculosis SUMu006]
gi|308347509|gb|EFP36360.1| transcriptional regulator [Mycobacterium tuberculosis SUMu007]
gi|308351408|gb|EFP40259.1| transcriptional regulator [Mycobacterium tuberculosis SUMu008]
gi|308352135|gb|EFP40986.1| transcriptional regulator [Mycobacterium tuberculosis SUMu009]
gi|308356085|gb|EFP44936.1| transcriptional regulator [Mycobacterium tuberculosis SUMu010]
gi|308360040|gb|EFP48891.1| transcriptional regulator [Mycobacterium tuberculosis SUMu011]
gi|308367605|gb|EFP56456.1| transcriptional regulator [Mycobacterium tuberculosis SUMu012]
gi|323717090|gb|EGB26300.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A]
gi|326906014|gb|EGE52947.1| transcriptional regulator [Mycobacterium tuberculosis W-148]
gi|328456972|gb|AEB02395.1| transcriptional regulator [Mycobacterium tuberculosis KZN 4207]
Length = 381
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/265 (8%), Positives = 52/265 (19%), Gaps = 41/265 (15%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T ++A +++ G P I + L +
Sbjct: 13 RIAVT-SARRAEELCALLRRQGAEVCSAPAIKMIALPDDDELQNNTEALIADPPDILVAH 71
Query: 56 SSESLSTLPANFCRHTPIF----------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A I + +S + ++
Sbjct: 72 TGIGFRGWLAAAEGWGLANELLESLSSARIISRGPKATGALRAAGLREEWSPDSESSHEV 131
Query: 106 IVEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIA----YP 156
+ + + F L + I Y + +
Sbjct: 132 LEYLLESGVSRTRIAVQLHGAADSWDPFPEFLGGLRFAGAQVVPIRVYRWKPAPLGGVFD 191
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIP 206
+ DA+ F + + L + +C+ + +
Sbjct: 192 HLVTGIARRQFDAVTFTSAPAAAAVLERSRELDIEDQLLAALRTDVHAMCVGPVTSRPLI 251
Query: 207 ASYKNVVTVACFPKETSLLKLLPLR 231
V E L L
Sbjct: 252 RKG-----VPTSAPERMRLGALARH 271
>gi|317014610|gb|ADU82046.1| uroporphyrinogen-III synthase [Helicobacter pylori Gambia94/24]
Length = 226
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 58/194 (29%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDLTPFNALIFTSKNAVFSLLKTLKDSPKLKTLQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ ++ + K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFAQEILPLLKGKSVLYLRAKEIASPLDTILLEHGINFQQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F + + + N A + +A
Sbjct: 150 EQNALKPQEKSVLIFTAISHAKAFLHYFEFLENYTAISIGNTTAHYLQEKGIQS-YIAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALNLR 222
>gi|300713095|ref|YP_003738907.1| uroporphyrinogen-III synthase [Halalkalicoccus jeotgali B3]
gi|299126779|gb|ADJ17116.1| uroporphyrinogen-III synthase [Halalkalicoccus jeotgali B3]
Length = 244
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 68/244 (27%), Gaps = 25/244 (10%)
Query: 3 IVITRPIKKALRTQEK---IQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+ + RP R E +Q + P+ P+ + Q TS
Sbjct: 6 VAVLRP--DDSRIVEAVEYLQTLDVSPIPDPMLAITPT-----GQVPQHADYCIFTSETG 58
Query: 60 LS--TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ R T + A+G+ +A +G++ + +V++ +
Sbjct: 59 VDLAATAGWKQRGTTVCAVGDQTATALCNRGYSVDIVPSTFTSTG---LVDELSTDVEGQ 115
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM-KNLLQNADAILFYARS 176
+ + + L + I Y + ++ + D ILF +
Sbjct: 116 IVELARSAHGSEVLVEGLEAAGAIVSEICLYRLERPETAGQSVSLAVDGKLDGILFTSPK 175
Query: 177 SVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+V +F + + A+ V + T L ++
Sbjct: 176 TVEHFVQIATERDAVAALQRELEETIVGAIGAPTKRAVDKRGIAVDVMPDTVGFTQLAEI 235
Query: 228 LPLR 231
R
Sbjct: 236 TVRR 239
>gi|300774729|ref|ZP_07084592.1| uroporphyrinogen-III synthase [Chryseobacterium gleum ATCC 35910]
gi|300506544|gb|EFK37679.1| uroporphyrinogen-III synthase [Chryseobacterium gleum ATCC 35910]
Length = 227
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/234 (11%), Positives = 73/234 (31%), Gaps = 17/234 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I+ T+ I + K ++G ++ + + + ++Y + TS +
Sbjct: 1 MKILFTKNIDPS--IISK--ELGEDILVDCVEVIKTNPIMISPFDLKNYS-LIFTSVNGV 55
Query: 61 STLPANFCRHTPIFAIGEASACLA----RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ N R F + ++ + G + A+ + +
Sbjct: 56 TAFFKNRFRPNEDFTAKNYNKIYCVGEKTKRELRKHGFGTFKVLKNAETLSRFIIGKCQH 115
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ ++ G + L I + + Y +++I + + A +F++ S
Sbjct: 116 EQFLHFCGNLAINVLDKDLPLQNIKYKKVTIYNTEEINPV------ITEKYHAAVFFSPS 169
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
V F + + + + + + + +S+ L+
Sbjct: 170 GVRSFAK--RNSLEGMKLFSIGETTSGELRTYTQEEIFTSEENTLSSIFALIRK 221
>gi|254779768|ref|YP_003057874.1| uroporphyrinogen-III synthase [Helicobacter pylori B38]
gi|254001680|emb|CAX29903.1| Uroporphyrinogen-III synthase (UROS) (Uroporphyrinogen-III
cosynthetase) (Hydroxymethylbilane hydrolyase)
[Helicobacter pylori B38]
Length = 226
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKDSPKLKMLQNIPAYALSEPTAKTLQDHHFKTAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ ++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFAKEILPLLEKKSVLYLRAKEIASSLDAILLEHGINFQQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F + + + N AS + +A
Sbjct: 150 EQNALKPKEKSVLIFTAISHAKAFLHYFEFLENYTAISIGNTTASYLQEKGIQS-YIAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALNLR 222
>gi|242310765|ref|ZP_04809920.1| uroporphyrinogen-III synthase [Helicobacter pullorum MIT 98-5489]
gi|239523163|gb|EEQ63029.1| uroporphyrinogen-III synthase [Helicobacter pullorum MIT 98-5489]
Length = 233
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 56/196 (28%), Gaps = 8/196 (4%)
Query: 31 LSYFIHDRESVFLAMQQSYGAIAITSSESL---STLPANFCRHTPIFAIGEASACLARQK 87
L ++ L + + TS ++ + IG S
Sbjct: 24 LLEICFIQDDCLLEKIRKSDCLIFTSKNAIFALEHFVPQIWKKLSCCVIGNGSKKALESF 83
Query: 88 GFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDC 147
G F K+ E+ F K +++ G+ + + L +
Sbjct: 84 GIKAEFVAKNPYGVS---FGEELGEFLANKKPLFIRGQKVASNLLEILRSKGVFAIESIL 140
Query: 148 YYSQDIAYPETTMKNLLQNADAILFYA-RSSVLYFFSLPLPAKISAAFLCLSNNIASAIP 206
Y ++ + + + L D+I+F++ SS+ F LC+ +
Sbjct: 141 YQNKILKLSQKQREILKPKKDSIIFFSAPSSIKAFLKNFSWED-DYIALCIGKTTKNEAK 199
Query: 207 ASYKNVVTVACFPKET 222
+ PK
Sbjct: 200 KLLGENAEILLSPKVE 215
>gi|261878999|ref|ZP_06005426.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270334384|gb|EFA45170.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 251
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/220 (11%), Positives = 54/220 (24%), Gaps = 12/220 (5%)
Query: 20 QKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITSSESLSTLPANF------CRH 70
+K G V P F S+ A+ TS +++
Sbjct: 24 KKYGVEFVFRPFIKVEGLSAKEFRQQKVSILSHTAVVFTSRHAINNYFKLAKDLRLTIPE 83
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
+ + L QK + ++ + + N
Sbjct: 84 EMRYFCVTETISLYIQKYVQYRKRKVFFGSTGKIDDLLPAMMKRKDEKFLVPLSSVHNDD 143
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI 190
+ L + Y + + + + N + D ++F + V Y K
Sbjct: 144 IKHLLDSKGLNHTECVMYRTVSNDFTQEEVDNF--DCDMLIFSTPTGVEYLTKSFPDVKQ 201
Query: 191 -SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F A+ + V + S++ L
Sbjct: 202 GKLKFGAFGPATGKALENAGLKASLVGGTKEHPSMISALE 241
>gi|144897177|emb|CAM74041.1| Uroporphyrinogen III synthase HEM4 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 184
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 9/167 (5%)
Query: 69 RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
R P++A+G+ASA AR+ G+T + + +LA ++ + ++ G
Sbjct: 11 RSLPVWAVGDASAREARRMGYTSVESAGGDVDDLAALVAGRCR--PEDGCFLHAAGTVVA 68
Query: 129 FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPL 186
L +R + Y ++ + + L DA LF++ + F +L
Sbjct: 69 GDLAGMLGRQGFDVRRLVLYQARTASVLSADLLQALAAGEIDAALFFSPRTAATFVTLAG 128
Query: 187 PAKIS-----AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
A LS +A + A + + VA P + +LL L
Sbjct: 129 AAGAGEMTAGIVAYALSPAVARELSALPWSALRVAEAPTQAALLAAL 175
>gi|329903548|ref|ZP_08273543.1| uroporphyrinogen III synthase [Oxalobacteraceae bacterium IMCC9480]
gi|327548286|gb|EGF32979.1| uroporphyrinogen III synthase [Oxalobacteraceae bacterium IMCC9480]
Length = 256
Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 79/250 (31%), Gaps = 24/250 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSSE 58
+VITRP+ ++L ++++ V++PL + ++ LA +S+ +A S
Sbjct: 5 LVITRPLAQSLALAQQLRDGDRELVILPLLEILPLPDTSALQAVLAQLESFALVAFVSPN 64
Query: 59 SLSTLPANFCRHT---PIFAIGEASACLARQKG-----FTQIFHGKDNSINLAKIIVEQK 110
++ A P+ +GE S + G + + ++
Sbjct: 65 AIDATFAQLACWPPSVPLAVMGEGSRRALARHGVAAGLYQITSPLDTQRTDSQTLLEALD 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE---TTMKNLLQNA 167
+ + ++ + G+ D L + I ++ + Y + + +LL
Sbjct: 125 LSRLQGRQVLIVRGESGRELLADALRDAGISVQQVAAYRRAAPLLDDALRQRLTDLLAQE 184
Query: 168 DAILFYARSSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPASYKNVVTVACFP 219
+ + ++ + IA + V +
Sbjct: 185 GDWVITSSEALQVLMHFVQQVDAESGVDKIQRMKLFVPHRRIAETALSLGFRSVCLTGS- 243
Query: 220 KETSLLKLLP 229
+ LL L
Sbjct: 244 GDEGLLTALQ 253
>gi|315638247|ref|ZP_07893429.1| uroporphyrinogen-III synthase [Campylobacter upsaliensis JV21]
gi|315481783|gb|EFU72405.1| uroporphyrinogen-III synthase [Campylobacter upsaliensis JV21]
Length = 214
Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 59/186 (31%), Gaps = 10/186 (5%)
Query: 45 MQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
+ + A+ +TS ++ L + I A++ K S+ K
Sbjct: 30 NLKDFNALILTSKNAVKALERAKIKLNFTLQIYAVGEKTAKEAKKLGFTKIKIPSLAYGK 89
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+ ++ + +YL GK + L + + L+ + Y + A L
Sbjct: 90 TLFDEFKDELKGQKCLYLRGKNIASKLNEDLQNYGVKLKEVIVYENVFKACKIE-----L 144
Query: 165 QNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + + SVL FF F+ + + A + N +A +
Sbjct: 145 KQPAIFILTSPHSVLNFFKFYKAHPKD-HFIAIGQSTAKNLKGLQFN---LAKEATIKAC 200
Query: 225 LKLLPL 230
+ L
Sbjct: 201 VD-LAR 205
>gi|315932216|gb|EFV11159.1| uroporphyrinogen-III synthase HemD family protein [Campylobacter
jejuni subsp. jejuni 327]
Length = 209
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 60/208 (28%), Gaps = 16/208 (7%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPA-NFCRHTPIFAIGEASACLA 84
+ L+ I SV L++ Y A+ TS +L L + + +
Sbjct: 14 VENLILNEIIFYDFSVDLSL---YDALICTSKNALKALQNAKITLNFKLNLYAVGQSTAQ 70
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
K + + +E + +YL K L + L
Sbjct: 71 YAKNLGFKKIKIPSKAYGKDLFLE-FKEELKTQKCLYLRAKNIVSTLNLDLKNAGVDLDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y + + L + +F + SV F + + + + A
Sbjct: 130 MIVYENVFKKGDKK-----LTHPAIFIFTSPLSVENFLKFYSLKEED-KVVVIGQSTAKK 183
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + SLL+ + L +
Sbjct: 184 L--LNFKNLYICE---NQSLLECVKLAK 206
>gi|296139101|ref|YP_003646344.1| uroporphyrinogen III synthase HEM4 [Tsukamurella paurometabola DSM
20162]
gi|296027235|gb|ADG78005.1| Uroporphyrinogen III synthase HEM4 [Tsukamurella paurometabola DSM
20162]
Length = 378
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/264 (8%), Positives = 58/264 (21%), Gaps = 43/264 (16%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
+ +T ++A + + G V P + + V L + + T+
Sbjct: 18 VAVT-AARRADELSTLLIRRGAAVVAAPAISMVPLSDDVRLRAATDELLTAPPDLLVATT 76
Query: 57 SESLSTLPANFCRHTPI----------FAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
I + S + A+++
Sbjct: 77 GIGFRGWLEAAEGWGVAEGLVAALGGGRVISRGPKATGALRAAGLREEWSPKSESSAEVL 136
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFED-----YLIEHKIPLRVIDCYYSQDIAYPETTMK 161
+ + + + L + + + Y + +
Sbjct: 137 SHLAGEDLHGQRVAVQLHGATDDWDPNPGLLDGLRDLGAEIVPVPVYRWEQPEDLSGLDR 196
Query: 162 NL----LQNADAILFYARSSVLYFFSLPLPAKIS----------AAFLCLSNNIASAIPA 207
+ L DA+ F + + + ++ C+ A+ +
Sbjct: 197 IVEAIALAEVDAVTFTSAPAAASLLERAVELGVADSVRAALTGPVVAYCVGPVTATPLQR 256
Query: 208 SYKNVVTVACFPKETSL-LKLLPL 230
V + L L
Sbjct: 257 EGIESV------TPERMRLGALAR 274
>gi|153951222|ref|YP_001397804.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. doylei
269.97]
gi|152938668|gb|ABS43409.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. doylei
269.97]
Length = 209
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 61/208 (29%), Gaps = 16/208 (7%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL-PANFCRHTPIFAIGEASACLA 84
+ L+ + SV L++ Y A+ TS +L L A + + +
Sbjct: 14 VENLILNEIVFYDFSVDLSL---YDALICTSKNALKALQHAKITLNFKLNLYAVGQSTAQ 70
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
K + + +E + +YL K L + L
Sbjct: 71 YAKNLDFKKIKFPSKAYGKDLFLE-FKEELKTQKCLYLRAKNIVSTLNLDLKNAGVDLDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
I Y + + L + +F + SV F + + + + A
Sbjct: 130 IIVYENVFKKGDKE-----LIHPAIFIFISPLSVENFLKFYSLKEED-KVVVIGQSTAKK 183
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + SLL+ + L +
Sbjct: 184 L--LNFKNLYICE---NQSLLECVKLAK 206
>gi|86150367|ref|ZP_01068593.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85839192|gb|EAQ56455.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
CF93-6]
Length = 209
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 59/208 (28%), Gaps = 16/208 (7%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL-PANFCRHTPIFAIGEASACLA 84
+ L+ + SV L++ Y A+ TS +L L A + + +
Sbjct: 14 VENLILNEIVFYDFSVDLSL---YDALICTSKNALKALQHAKITLNFKLNLYAVGQSTAQ 70
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
K + + +E + +YL K L + L
Sbjct: 71 YAKNLGFKKIKIPSKAYGKDLFLE-FKEELKMQKCLYLRAKNIVSTLNLDLKNVGVDLDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y + + L +F + SV F + + + + A
Sbjct: 130 MIVYENVFKKGDKK-----LIYPAIFIFTSPLSVENFLKFYSLKEED-KVVAIGQSTAKK 183
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + SLL + L +
Sbjct: 184 L--LNFKNLYICE---NQSLLDCVKLAK 206
>gi|116669817|ref|YP_830750.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Arthrobacter sp. FB24]
gi|116609926|gb|ABK02650.1| Uroporphyrinogen III synthase HEM4 [Arthrobacter sp. FB24]
Length = 387
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/258 (10%), Positives = 65/258 (25%), Gaps = 36/258 (13%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I +T +++ E +++ G + P +E + L + A+ +
Sbjct: 32 RIGVT-SHRRSQDLIEALERRGAEVLHAPALKIAPVQEDMRL--VEDTKAVIAAKPDLCI 88
Query: 62 TLPANFCRHTPIFAIGE-------ASACLARQKGFTQIFHGKDNSINLAK---------- 104
A R A + R G + LA
Sbjct: 89 ATTAYGMRRWCEAADASGIGDELLETLAACRMFVRGPKARGAVRAAGLADVGISSDETTA 148
Query: 105 -IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK-- 161
++ K + + + L + + Y + +
Sbjct: 149 TLVDMLLKEGVRGKTVAVQLHGYTDVRQLERLKMSGATVLTVTPYRWVKPDGEDKLPRLI 208
Query: 162 --NLLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASY 209
N D + F + +V + L K + + A + +
Sbjct: 209 EAACSGNLDVLTFTSAPAVDAMWSTAHEMGLYKQLVDALKTTVTTAVVGPITAQPLIDAG 268
Query: 210 KNVVTVACFPKETSLLKL 227
+ + + +L++L
Sbjct: 269 LSP-LIPERFRMGALIRL 285
>gi|313204648|ref|YP_004043305.1| uroporphyrinogeN-iii synthase [Paludibacter propionicigenes WB4]
gi|312443964|gb|ADQ80320.1| uroporphyrinogen-III synthase [Paludibacter propionicigenes WB4]
Length = 252
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 59/242 (24%), Gaps = 22/242 (9%)
Query: 2 YIVITRPIKKALR----TQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAI 54
I++++P + +K P F Y AI
Sbjct: 5 RILVSQPRPTTEKSPYFDIS--EKYSVKIDFRPFIKVEPILAKEFRTQRITILDYTAIIF 62
Query: 55 TSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
+ + F + E+ A ++ + + +V
Sbjct: 63 NARHGIDHFFRLCEEMRITIPETMKYFCVSESVALYLQRYIHYRKRKVFYGATGKLAELV 122
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA 167
T + + + +N L + K+ Y + + N
Sbjct: 123 TIMNKHTD-EKYLLITSDVQNEDTIATLEKLKVTYAKAVMYKTVSNDFGPDE----EFNY 177
Query: 168 DAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
D +LF++ + + C A A+ + + P S+
Sbjct: 178 DMLLFFSPIGIASLLKNFPNFEQGEIQIGCFGATTAQAVRDAGLRLDIEVPLPGVPSMTM 237
Query: 227 LL 228
L
Sbjct: 238 AL 239
>gi|261839944|gb|ACX99709.1| uroporphyrinogen III cosynthase [Helicobacter pylori 52]
Length = 226
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 60/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLKILQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F + + + N A + +A
Sbjct: 150 EQNALKPKEKSVLIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIQS-YIAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|315303321|ref|ZP_07873951.1| uroporphyrinogen-III synthase [Listeria ivanovii FSL F6-596]
gi|313628312|gb|EFR96815.1| uroporphyrinogen-III synthase [Listeria ivanovii FSL F6-596]
Length = 202
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/186 (11%), Positives = 52/186 (27%), Gaps = 5/186 (2%)
Query: 48 SYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
I TS+ +++ A P + + ++ +
Sbjct: 11 EAEWIFFTSANAVTYFFARQNVIQPYKYAVIGEQTSEKLAEYGFSPSFIPSAYQTEIFLA 70
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--Q 165
E + + ++ E+ L E + ++ Y + + +
Sbjct: 71 EWLNRYPEKTSVLLPKSNLSRTIIEETLNEKGYFVFPVELYETIVPTASRLELITIFARD 130
Query: 166 NADAILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
I+F + S+ F+++ K + + N AI +V A
Sbjct: 131 EKQIIIFASPSAWKSFYAVAKNFPNQKENWRIASIGNVTTKAIVTDGWDVTYQAETFTMK 190
Query: 223 SLLKLL 228
L L+
Sbjct: 191 HLADLI 196
>gi|78776624|ref|YP_392939.1| uroporphyrinogen-III synthase [Sulfurimonas denitrificans DSM 1251]
gi|78497164|gb|ABB43704.1| Uroporphyrinogen III synthase HEM4 [Sulfurimonas denitrificans DSM
1251]
Length = 212
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 57/196 (29%), Gaps = 10/196 (5%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
+ + + Y + +TS +++ L A S A
Sbjct: 22 LDVRYLKPEID---FSKYDYLIVTSKQTVKALEQYNKEEFINIAALCVSDKTADSYR-AI 77
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ +++ +YL + F E + Y S+
Sbjct: 78 GGKILASGDGYGDNLIKNIRELPHVTKWLYLRAELIASSFVQIAKEEGYEIDEKILYISE 137
Query: 152 DIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKN 211
+ ++ +++ ++F + SS+ F +A + + A+ +P
Sbjct: 138 C---SKEILEVRVEDDSTLIFTSPSSIECFLKNNTIH-PNAKVIVIGTTTAAYLPKD--I 191
Query: 212 VVTVACFPKETSLLKL 227
++ S ++L
Sbjct: 192 KYVISQNTSIESCIEL 207
>gi|57242032|ref|ZP_00369972.1| uroporphyrinogen-III synthase [Campylobacter upsaliensis RM3195]
gi|57017224|gb|EAL54005.1| uroporphyrinogen-III synthase [Campylobacter upsaliensis RM3195]
Length = 214
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 10/187 (5%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ + A+ +TS ++ L + I A++ K S+
Sbjct: 29 INLKDFNALILTSKNAVKALEKAKIKLNFTLQIYAVGEKTAKEAKKLGFTKIKIPSLAYG 88
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
K + ++ + +YL GK + L + + L+ + Y + A
Sbjct: 89 KTLFDEFKDELKGQKCLYLRGKNIASKLNEDLQNYGVKLKEVIVYENVFKACKIE----- 143
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
L+ + + SVL F F+ + N A + + +A +
Sbjct: 144 LKQPAIFILTSPHSVLNFLKFYKAHPKD-HFIAIGQNTAKNLKGLQFS---LAKEATIKA 199
Query: 224 LLKLLPL 230
+ L
Sbjct: 200 CVD-LAR 205
>gi|205374357|ref|ZP_03227155.1| uroporphyrinogen-III synthase [Bacillus coahuilensis m4-4]
Length = 205
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 60/184 (32%), Gaps = 10/184 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH--DRESVFL--AMQQSYGAIAITSSE 58
I++TR ++++ + I+ +G +PL F + L + I TS
Sbjct: 12 IIVTRGVEQSTSMIQAIECLGGTAHAVPLLAFSESTLEDEYLLMMEKITQFEWIFFTSHN 71
Query: 59 SLSTLPANFC------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
S+ + + + + +I E +
Sbjct: 72 SIHFFRRKLKKLGISLKDLHVNIAAVGEKTAKHLRELGVEVDFLPSRFTAEDMIQEFLLE 131
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ ++ G + + L + +I + Y ++ ++ ++N +I+
Sbjct: 132 NPLAQHILIPKGNLASSILSNGLAKERISHQEWVIYKNEVPTSSPQCLEETVKNIGSIVL 191
Query: 173 YARS 176
++++
Sbjct: 192 HSQA 195
Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 9/117 (7%), Positives = 30/117 (25%), Gaps = 7/117 (5%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--KNLLQNADAILFYA 174
K +I G ++ + + + + + + + I F +
Sbjct: 10 KQIIVTRGVEQSTSMIQAIECLGGTAHAVPLLAFSESTLEDEYLLMMEKITQFEWIFFTS 69
Query: 175 RSSVLYFFSLPLPAK-----ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+S+ +F + + A + V + +++
Sbjct: 70 HNSIHFFRRKLKKLGISLKDLHVNIAAVGEKTAKHLRELGVEVDFLPSRFTAEDMIQ 126
>gi|57237962|ref|YP_179211.1| uroporphyrinogen-III synthase [Campylobacter jejuni RM1221]
gi|148926017|ref|ZP_01809703.1| hypothetical protein Cj8486_0996 [Campylobacter jejuni subsp.
jejuni CG8486]
gi|205355830|ref|ZP_03222599.1| hypothetical protein Cj8421_1106 [Campylobacter jejuni subsp.
jejuni CG8421]
gi|315124563|ref|YP_004066567.1| uroporphyrinogen-III synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|57166766|gb|AAW35545.1| uroporphyrinogen-III synthase [Campylobacter jejuni RM1221]
gi|145845496|gb|EDK22588.1| hypothetical protein Cj8486_0996 [Campylobacter jejuni subsp.
jejuni CG8486]
gi|205346264|gb|EDZ32898.1| hypothetical protein Cj8421_1106 [Campylobacter jejuni subsp.
jejuni CG8421]
gi|315018285|gb|ADT66378.1| uroporphyrinogen-III synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315058521|gb|ADT72850.1| Uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
S3]
Length = 209
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 59/208 (28%), Gaps = 16/208 (7%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL-PANFCRHTPIFAIGEASACLA 84
+ L+ + SV L++ Y A+ TS +L L A + + +
Sbjct: 14 VENLILNEIVFYDFSVDLSL---YDALICTSKNALKALQHAKITLNFKLNLYAVGQSTAQ 70
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
K + + +E + +YL K L + L
Sbjct: 71 YAKNLGFKKIKIPSKAYGKDLFLE-FKEELKMQKCLYLRAKNIVSTLNLDLKNVGVDLDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y + + L +F + SV F + + + + A
Sbjct: 130 MIVYENVFKKGDKK-----LIYPAIFIFTSPLSVENFLKFYSLKEED-KVVVIGQSTAKK 183
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + SLL + L +
Sbjct: 184 L--LNFKNLYICE---NQSLLDCVKLAK 206
>gi|109948082|ref|YP_665310.1| uroporphyrinogen-III synthase [Helicobacter acinonychis str.
Sheeba]
gi|109715303|emb|CAK00311.1| hemD [Helicobacter acinonychis str. Sheeba]
Length = 220
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 55/195 (28%), Gaps = 9/195 (4%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQK-----GFTQIFHGKDN 98
+ A+ TS ++ +L + + A +
Sbjct: 26 LNVNPFNALIFTSKNAVFSLLETLKHSPKLKILQNIPAYALSEPTAKTLQDHHFKIAFIG 85
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY-PE 157
K ++ + K ++YL K + L+EH I L+ Y ++
Sbjct: 86 KKAHGKEFAKEIIPLLKGKSVLYLRAKDIASSLDTILLEHGINLKQAVVYENKLKHLTLS 145
Query: 158 TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
+ ++F A S F + + + N A + +A
Sbjct: 146 EQNALKPKENSILIFTAISHAKAFLHYFG-FLKTHTAISIGNTTAQYLQERGIQS-YIAK 203
Query: 218 FPKETSLLK-LLPLR 231
P + L L L+
Sbjct: 204 KPSLEACLDLALSLK 218
>gi|89256045|ref|YP_513407.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
holarctica LVS]
gi|115314523|ref|YP_763246.1| uroporphyrinogen-III synthase [Francisella tularensis subsp.
holarctica OSU18]
gi|156502057|ref|YP_001428122.1| putative uroporphyrinogen III synthase [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|167010197|ref|ZP_02275128.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
holarctica FSC200]
gi|254367385|ref|ZP_04983411.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
holarctica 257]
gi|290954241|ref|ZP_06558862.1| uroporphyrinogen-III synthase [Francisella tularensis subsp.
holarctica URFT1]
gi|295312361|ref|ZP_06803146.1| uroporphyrinogen-III synthase [Francisella tularensis subsp.
holarctica URFT1]
gi|89143876|emb|CAJ79094.1| Uroporphyrinogen III synthase [Francisella tularensis subsp.
holarctica LVS]
gi|115129422|gb|ABI82609.1| uroporphyrinogen-III synthase [Francisella tularensis subsp.
holarctica OSU18]
gi|134253201|gb|EBA52295.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
holarctica 257]
gi|156252660|gb|ABU61166.1| putative uroporphyrinogen III synthase [Francisella tularensis
subsp. holarctica FTNF002-00]
Length = 249
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 68/195 (34%), Gaps = 15/195 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A+ EK+ G + V +P + + + + Y ++ TS ++
Sbjct: 1 MKILVCRPHNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVL---DYTSLVFTSKYAV 57
Query: 61 STLPAN----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L + ++ I+++G ++A + + I+ + S L II+ Q +
Sbjct: 58 ESLFSQYPIDLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI---AYPETTMKNLLQNAD-AILF 172
+ + G + + Y I +T K L N I+
Sbjct: 118 AIISGVSGN----DLLLEELSKLTHCHKFETYLRVFIDLYELLDTYNKLFLHNQPDIIIA 173
Query: 173 YARSSVLYFFSLPLP 187
+ +
Sbjct: 174 TSLDVFKSLNRIFEK 188
>gi|221118111|ref|XP_002163700.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 452
Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 21/202 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLS-----YFIHDRESVFLAMQQSYGAIAIT 55
M IV+ R + + G+ +P+ E F Y A+ IT
Sbjct: 1 MSIVLLREEDDDDYYHKLLYANGFFVCSIPVLCFSYYNIEKLEE--FFHNSSEYSALVIT 58
Query: 56 SSESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S + L + + I+ +G+++ ++ G + + N+ LA I
Sbjct: 59 SKHATYALEVVLKKNNLSFSLPQNFYIYVVGKSTELYLQKLGLSSLGSDSGNADQLADYI 118
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+++K+ KPL+++ G D L + + I CY + + ++
Sbjct: 119 IKRKIF--HLKPLMFVCGNLARETIPDKLRNFGLTVETISCYKTIANDNFPEKISQFIKQ 176
Query: 167 ADAI---LFYARSSVLYFFSLP 185
D +F++ S V ++FS
Sbjct: 177 YDIPNVIVFFSPSGVKFYFSEI 198
>gi|207092323|ref|ZP_03240110.1| uroporphyrinogen-III synthase [Helicobacter pylori HPKX_438_AG0C1]
Length = 220
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 60/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 24 LDPAPFNALIFTSKNAVFSLLETLKNSPKLKILQNIPAYALSEPTAKTLQDHHFKVAFIG 83
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 84 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 143
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F + + + N A + +A
Sbjct: 144 EQNALKPKEKSVLIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIPS-YIAKK 202
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 203 PSLEACLELALSLR 216
>gi|254368869|ref|ZP_04984882.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
holarctica FSC022]
gi|157121790|gb|EDO65960.1| uroporphyrinogen III synthase [Francisella tularensis subsp.
holarctica FSC022]
Length = 249
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 68/195 (34%), Gaps = 15/195 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I++ RP A+ EK+ G + V +P + + + + Y ++ TS ++
Sbjct: 1 MKILVCRPHNDAVNLTEKLCANGLLAVSLPTIKICYQKITESVL---DYTSLVFTSKYAV 57
Query: 61 STLPAN----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+L + ++ I+++G ++A + + I+ + S L II+ Q +
Sbjct: 58 ESLFSQYPIDLFKNKKIYSVGASTAAILEKYQLAAIYPVRHGSQELLDIILNQDISKEKF 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI---AYPETTMKNLLQNAD-AILF 172
+ + G + + Y I +T K L N I+
Sbjct: 118 AIISGISGN----DLLLEELSKLTHCHKFETYLRVFIDLYELLDTYNKLFLHNQPDIIIA 173
Query: 173 YARSSVLYFFSLPLP 187
+ +
Sbjct: 174 TSLDVFKSLNRIFEK 188
>gi|86150726|ref|ZP_01068942.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
260.94]
gi|85841896|gb|EAQ59142.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
260.94]
Length = 209
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 57/208 (27%), Gaps = 16/208 (7%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL-PANFCRHTPIFAIGEASACLA 84
+ L+ + SV L Y A+ TS +L L A + + +
Sbjct: 14 VENLILNEIVFYDFSVDL---SFYDALICTSKNALKALQHAKITLNFKLNLYAVGQSTAQ 70
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
K + + +E + +YL K L + L
Sbjct: 71 YAKNLGFKKIKIPSKAYGKDLFLE-FKEELKMQKCLYLRAKNIVSTLNLDLKNVGVDLDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y + + L +F + SV F + + + + A
Sbjct: 130 MIVYENVFKKGDKK-----LIYPAIFIFTSPLSVENFLKFYSLKEED-KVVVIGQSTAKK 183
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + SLL + L +
Sbjct: 184 L--LNFKNLYICE---NQSLLDCVKLAK 206
>gi|317180949|dbj|BAJ58735.1| uroporphyrinogen-III synthase [Helicobacter pylori F32]
Length = 220
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 60/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + + +
Sbjct: 24 LDPTPFNALIFTSKNAVFSLLETLKNSPKLQILQNIPAYALSEPTAKTLQNHHFKVAFIG 83
Query: 104 KI-----IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ ++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 84 EKAHGKDFAKEIIPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 143
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + +A
Sbjct: 144 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIQS-YIAKK 202
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 203 PSLEACLELALSLR 216
>gi|332883690|gb|EGK03970.1| uroporphyrinogen-III synthase [Dysgonomonas mossii DSM 22836]
Length = 252
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 55/210 (26%), Gaps = 14/210 (6%)
Query: 30 PLSYFIHDRESVFL---AMQQSYGAIAITSSESLSTLPANF------CRHTPIFAIGEAS 80
P F Q Y A+ T+ ++ + T + +
Sbjct: 37 PFIRVDGIDVKEFRQQRINIQDYTAVVFTARIAIDHFFSLCEELRVTMPETMKYFCISEA 96
Query: 81 ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKI 140
L QK S + + ++ I L E K+
Sbjct: 97 VALYLQKYIVYRKRKIFFSATGKMDGLATALTKHNKEKFIVPVSDVHTEDLTAVLDEKKV 156
Query: 141 PLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL-CLSN 199
Y + ++ + + D ++F+ + ++ F + + C
Sbjct: 157 DYTKSVMYRTV----SNEITESEILSYDMLIFFTPAGIVSLFKNVPNFEQGERAIGCFGT 212
Query: 200 NIASAIPASYKNVVTVACFPKETSLLKLLP 229
A A+ + + A P S+ L
Sbjct: 213 ATAKAVRDAGLRLDCEAPLPGMPSMTAALE 242
>gi|23010960|ref|ZP_00051474.1| COG1587: Uroporphyrinogen-III synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 379
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/257 (9%), Positives = 61/257 (23%), Gaps = 33/257 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
+++T ++ +Q+ G P I + L +++ + +T+
Sbjct: 22 VLVT-ADRRKSELAAALQRRGAEVRHAPALSMIPHADDEQLLAGTRDLVERPPDVVVVTT 80
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ H + E A + + A + E +
Sbjct: 81 GIGFRSWVEAADAHGLADRLLEVLADARIVARGPKARGAIQAAGLTADWVAESETSAEIA 140
Query: 117 K----------PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM----KN 162
+ + E + + Y PE
Sbjct: 141 DVLLGEGVAGLRIAVQHHGAGADGLDVVFAEAGAEVASLVVYRWGPPPDPEALRASVEAA 200
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKI-----------SAAFLCLSNNIASAIPASYKN 211
+ DA++F + + S + S + A +
Sbjct: 201 AVGEIDAVVFTSAPGAEAWLSAAEEHGVGRLVVSRFQDGSMVAAAVGPVTARPLEHRGVT 260
Query: 212 VVTVACFPKETSLLKLL 228
+ + +L++ L
Sbjct: 261 PLQ-PERGRLGALVRTL 276
>gi|321263873|ref|XP_003196654.1| uroporphyrinogen-III synthase [Cryptococcus gattii WM276]
gi|317463131|gb|ADV24867.1| Uroporphyrinogen-III synthase, putative [Cryptococcus gattii WM276]
Length = 299
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 12/121 (9%), Positives = 34/121 (28%), Gaps = 7/121 (5%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET---TMKNLLQNADAIL 171
+P ++L G L ++ + Y + + ++ +++ +
Sbjct: 174 NHRPYLFLCGDKSLDEMPTALRSEGRTVKEVMVYATSARDDFQGGLGRLEIPIKSKGWLA 233
Query: 172 FYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPA-SYKNVVTVACFPKETSLLKL 227
F++ SS + + + + V VA P +
Sbjct: 234 FFSPSSAAIVMPQIKQDQRRWDGWRIFAIGETTKKYLEEQAKIEVHAVADKPDAEGTFEA 293
Query: 228 L 228
+
Sbjct: 294 I 294
>gi|291518807|emb|CBK74028.1| uroporphyrin-III C-methyltransferase [Butyrivibrio fibrisolvens
16/4]
Length = 507
Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 62/225 (27%), Gaps = 12/225 (5%)
Query: 14 RTQEKIQKMGYIPVMMPLSYFIHDR-ESVFLAMQQSYGAIAITSSESLSTLPANFCRH-- 70
++ + G V + + + FL + TS+ + N +
Sbjct: 280 ELEKSLTSKGAEVVTVTAGTISPIKCDLAFLDSISDNNCVVFTSANGVKAFFWNLYQMAG 339
Query: 71 ------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGG 124
+ + F N + + +L
Sbjct: 340 LDARALGKVKFAAIGQKTSDVLRSFGFKADFVSEKQNGEDLAQLLNGKLAAGADIYWLCQ 399
Query: 125 KPRNFHFEDYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQNADAILFYARSSVLYFFS 183
K + +FE + + L I CY + + + + + D +F + S+ + +
Sbjct: 400 KASSEYFEGNISKE-FNLNKIYCYENVESEVEATEDFLSEVASCDGAIFTSGSNAAFAIN 458
Query: 184 LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
L A + + I S V + A ++K +
Sbjct: 459 LLGSHLPKA-IYSIGPACSKRIENSGFAVTSEAMVSSYDGVIKCI 502
>gi|120401327|ref|YP_951156.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954145|gb|ABM11150.1| Uroporphyrinogen III synthase HEM4 [Mycobacterium vanbaalenii
PYR-1]
Length = 380
Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/265 (10%), Positives = 61/265 (23%), Gaps = 41/265 (15%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
+ +T ++A +++ G + + L + T
Sbjct: 13 RVAVT-SARRADELSALLRRRGATVCSAAAIEMVPLPDDDELRQHTRSLIASPPDIVIAT 71
Query: 56 SSESLSTLPANFCRHTP-------------IFAIGEASACLARQKGFTQIFHGKDNSINL 102
+ A + +A+ L + ++S L
Sbjct: 72 TGIGFRGWVAAADGWGMATELTAALSNARIVSRGPKATGALRAAGLPEEWSPESESSREL 131
Query: 103 AKIIVEQKVLFTPQK-PLIYLGGKP-RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+VE + T L F D L + I Y
Sbjct: 132 LHYLVEGGIAGTRIAVQLHGATADWDPFPEFLDELRAAGAEVVPIRVYRWHPAPRNGEFD 191
Query: 161 KNLL----QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIP 206
+ + + DA+ F + +V + + + +C+ A +
Sbjct: 192 QLVAGIADEKFDAVSFTSAPAVASVLLRATEMGLEAEVLSALRTNVHAMCVGPVTARPLV 251
Query: 207 ASYKNVVTVACFPKETSLLKLLPLR 231
V E L L
Sbjct: 252 RLG-----VPTSAPERMRLGALARH 271
>gi|88596529|ref|ZP_01099766.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562694|ref|YP_002344473.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|88191370|gb|EAQ95342.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360400|emb|CAL35197.1| putative uroporphyrinogen-III synthase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|315930674|gb|EFV09694.1| uroporphyrinogen-III synthase HemD family protein [Campylobacter
jejuni subsp. jejuni 305]
Length = 209
Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 60/208 (28%), Gaps = 16/208 (7%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL-PANFCRHTPIFAIGEASACLA 84
+ L+ + SV L++ Y A+ TS +L L A + + +
Sbjct: 14 VENLILNEIVFYDFSVDLSL---YDALICTSKNALKALQHAKITLNFKLNLYAVGQSTAQ 70
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
K + + +E + +YL K L + L
Sbjct: 71 YAKNLGFKKIKIPSKAYGKDLFLE-FKEELKMQKCLYLRAKNIVSTLNLDLKNVGVDLDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y + + L + +F + SV F + + + + A
Sbjct: 130 MIVYENVFKKGDKK-----LIHPAIFIFTSPLSVENFLKFYSLKEED-KVVVIGQSTAKK 183
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + SLL + L +
Sbjct: 184 L--LNFKNLYICE---NQSLLNCVKLAK 206
>gi|300726137|ref|ZP_07059594.1| uroporphyrinogen-III synthase [Prevotella bryantii B14]
gi|299776607|gb|EFI73160.1| uroporphyrinogen-III synthase [Prevotella bryantii B14]
Length = 208
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 59/200 (29%), Gaps = 13/200 (6%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQ----SYGAIAITSSESLSTLPANFCR-----HTPIFA 75
+ PL + L + + +TS ++ + H + A
Sbjct: 13 TAIHTPLIEIRGLEDDTLLQQAAASITDHDILLMTSRMTVKYWYEAMQKVKAPWHGQVVA 72
Query: 76 IGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYL 135
IG +A +++G + + + + +I+ D L
Sbjct: 73 IGHTTAQALQERGAQNLIIAPQDDSYGVIELFRTDERLL-HRHVIFPRSAIALPIIPDGL 131
Query: 136 IEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL 195
E ++ + Y + +P+ + L D I+F + S++ F L +
Sbjct: 132 RELGYTVQTLTAYQNVMPEHPK---RVDLATIDTIVFTSPSTIDNFLKLYGTLPEDKTYE 188
Query: 196 CLSNNIASAIPASYKNVVTV 215
+ + K +
Sbjct: 189 TRGAITQAHLEKQLKKRNHI 208
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 158 TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA--FLCLSNNIASAIPASYKNVVTV 215
+ + D +L +R +V Y++ K + + + A A+ + +
Sbjct: 32 QQAAASITDHDILLMTSRMTVKYWYEAMQKVKAPWHGQVVAIGHTTAQALQERGAQNLII 91
Query: 216 ACFPKETSLLKL 227
A +++L
Sbjct: 92 APQDDSYGVIEL 103
>gi|183980548|ref|YP_001848839.1| transcriptional regulatory protein [Mycobacterium marinum M]
gi|183173874|gb|ACC38984.1| transcriptional regulatory protein [Mycobacterium marinum M]
Length = 383
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/266 (10%), Positives = 59/266 (22%), Gaps = 43/266 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAIT 55
I +T ++A +++ G P I E L + +
Sbjct: 13 RIAVT-SSRRAEELCALLRRHGADVCSAPAINMIALPEDDELQGNTEALIANPPDILVAH 71
Query: 56 SSESLSTLPANFCRH-------------TPIFAIGEASACLARQKGFTQIFHGKDNSINL 102
+ A I +A+ L + ++S +
Sbjct: 72 TGIGFRGWVAAAEGWGLAGELVDALSVGRTISRGPKATGELRAAGLREEWSPESESSQEV 131
Query: 103 AKIIVEQKVLFTPQK-PLIYLGGKP-RNFHFEDYLIEHKIPLRVIDCYYSQDIA----YP 156
+ ++E V L F L + I Y + +
Sbjct: 132 LEYLLESGVAGQRIAIQLHGAADGWDPFPEFVGGLRAAGAEVVPIRVYRWKPTPLGGAFD 191
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIP 206
+ + + DA+ F + + I +C+ + +
Sbjct: 192 QLVTEIARRQFDAVSFTSAPAAAAVLERGRELDIEEELLEALRNDVHAMCVGPVTSRPLI 251
Query: 207 ASYKNVVTVACFPKETSL-LKLLPLR 231
+ L L
Sbjct: 252 RKGV------PTSSPERMRLGALARH 271
>gi|87308937|ref|ZP_01091075.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Blastopirellula marina DSM 3645]
gi|87288280|gb|EAQ80176.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Blastopirellula marina DSM 3645]
Length = 645
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/261 (9%), Positives = 57/261 (21%), Gaps = 39/261 (14%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY------GAIAITSSESLSTLP 64
+ I+K G + P + E+ ++ A+ + L
Sbjct: 23 RGAEMASLIEKFGGQAFVSPSMREVPLDENRDAIDFANHVITGQIDAVIFMTGVGFQHLM 82
Query: 65 ANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
RH P G + +G T + + +
Sbjct: 83 KAVERHVDRQQFLNALSDIPTIVRGPKPLAAMKAEGLTPSIRVPEPNTWRELLQTLDAEF 142
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI----AYPETTMKNLLQNAD 168
+ N L + + Y + + + D
Sbjct: 143 PIANLKIGLQEYGVPNPSLIAGLEARGAEVIQLHVYDWDLPLDTQPLAMNLERIIRGDID 202
Query: 169 AILFYARSSVLYFFSLPLPAKIS---------AAFLCLSNNIASAIPASYKNVVTVACFP 219
+F + + + + L + + ++ + V P
Sbjct: 203 VAMFTSANQLTHLLKLAEQQRRKEELMAALRTVVIASVGPTMSERLREYGLPVDVEPVHP 262
Query: 220 KETSLLKL--------LPLRR 232
K L+ L ++
Sbjct: 263 KMGPLVAAAAEKSHDILVRKK 283
>gi|116179620|ref|XP_001219659.1| hypothetical protein CHGG_00438 [Chaetomium globosum CBS 148.51]
gi|88184735|gb|EAQ92203.1| hypothetical protein CHGG_00438 [Chaetomium globosum CBS 148.51]
Length = 294
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/256 (10%), Positives = 65/256 (25%), Gaps = 49/256 (19%)
Query: 24 YIPVMMPLSYFIHDRE------------SVFLAMQQSYGAIAITSSESLSTLP------- 64
Y P +P+ + ++ +YG + TS ++
Sbjct: 33 YEPSFVPVLKHQFGNDGMANVRSVLQSRAISTEEGSAYGGLIFTSQRAVEAFTKLVEERR 92
Query: 65 ----ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNS----INLAKIIVEQKVLFTPQ 116
+ P++++G A+ + LA I+E +
Sbjct: 93 GEDGWPHLQDVPVYSVGPATTRALKAVPQVPPLQVFGEHTGIGDRLAPFILEHYGEWYKD 152
Query: 117 K----PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-----QNA 167
+ PL++L G+ R L + + Y + ++ + L +
Sbjct: 153 RESKPPLLFLVGEKRRDIIPKVLTAAGWRVDEVVVYGTGELESFREDFRLRLADTADRPR 212
Query: 168 DAILFYARSSVLYFFSLP------------LPAKISAAFLCLSNNIASAI-PASYKNVVT 214
++ ++ S S + + +
Sbjct: 213 RWVVVFSPSGCDSMLSAMGLLDESTGKARPKQPDRNTLIATIGPTTRDHLIHEFGYEPEV 272
Query: 215 VACFPKETSLLKLLPL 230
A P + + +
Sbjct: 273 CAEQPTPEGVWQGIAR 288
>gi|108563591|ref|YP_627907.1| uroporphyrinogen-III synthase [Helicobacter pylori HPAG1]
gi|107837364|gb|ABF85233.1| uroporphyrinogen III cosynthase [Helicobacter pylori HPAG1]
Length = 226
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + + +
Sbjct: 30 LDLTPFNALIFTSKNAVFSLLETLKNSPKLKILQNIPAYALSEPTAKTLQNHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F + + + N A + +A
Sbjct: 150 EQNALKPKEKSVLIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIPSH-IAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|84494396|ref|ZP_00993515.1| uroporphyrinogen-III synthetase [Janibacter sp. HTCC2649]
gi|84383889|gb|EAP99769.1| uroporphyrinogen-III synthetase [Janibacter sp. HTCC2649]
Length = 362
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/260 (8%), Positives = 53/260 (20%), Gaps = 37/260 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ------SYGAIAITS 56
+++T +++ + + G P + L + + +T+
Sbjct: 6 VLVT-ADRRSGELSSALVRRGATVRHAPALTIVPHEHDDELLVATKELIALPPDVVVVTT 64
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF----------HGKDNSINLAKII 106
L + A + S A+I+
Sbjct: 65 GIGLRGWIEAADAAGLADDLLVVLARARIIARGPKARGAIQAAGLTADWVAESETSAEIL 124
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK----N 162
+ + L + + Y P +
Sbjct: 125 ELLLDEGVTGLRIAVQHHGAGADGLDTELAAAGADVASLVVYRWGPTPDPAALAQSVRDA 184
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKIS-----------AAFLCLSNNIASAIPASYKN 211
DA++F + + + ++ + A +
Sbjct: 185 AAGEIDAVVFTSAPGAHAWLAAADAEGVTDGIAARCASGCLVAAAVGPVTAIPLQDRGIE 244
Query: 212 VVTVACFPKETSLLKLLPLR 231
+ P L L R
Sbjct: 245 PIV----PDR-GRLGALVRR 259
>gi|88802327|ref|ZP_01117854.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P]
gi|88781185|gb|EAR12363.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P]
Length = 531
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 58/182 (31%), Gaps = 17/182 (9%)
Query: 49 YGAIAITSSESLSTLPANFCR---HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ + ITS + + +F + + ++ H +++ LA+
Sbjct: 357 HENVIITSQNGVEAILNSFAKEEITFKNIFCVGRRTKKLIENRIGKVTHAAKSALALAEY 416
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
I +Q K + Y R YL H++ + ++ Y + +
Sbjct: 417 ISKQTA----IKQVSYFCSDVRLDVLPTYLQAHEVTVHEVEAYKTMLNP------IKIKA 466
Query: 166 NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+LF++ S + + C+ A + V VA P +L
Sbjct: 467 AVSGVLFFSPSGIESYLE---ENATDKVAFCIGETTAVVARKY-FDKVEVANMPDVECVL 522
Query: 226 KL 227
+L
Sbjct: 523 EL 524
>gi|88866121|gb|ABD56998.1| uroporphyrinogen-III synthase putative [Jannaschia sp. CCS1]
Length = 196
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 8/188 (4%)
Query: 42 FLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN 101
+ +TS ++ +P P + +G + +AR G + F G+D
Sbjct: 8 AEIDLAGVHGLILTSQAAVPFVPQT---TLPAYCVGARTTAVARGAGISADFVGED---- 60
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
A +V+ P PL++L G L H I ++ + Y +D
Sbjct: 61 -ADALVQALAARRPDGPLLHLHGTHTRGDIARRLSAHGITVQSLTLYDQRDCPPDPAFYD 119
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ + + ++ S + F + + L LS +A A+P + VA P
Sbjct: 120 AITRPDLIVPLFSPRSAILFAAASQTLRDDTVLLALSPAVAHALPPRMQTQTRVAAAPTG 179
Query: 222 TSLLKLLP 229
+ LL
Sbjct: 180 QQMRDLLE 187
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 6/40 (15%), Positives = 13/40 (32%), Gaps = 2/40 (5%)
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
C+ + + + V +L++ L RR
Sbjct: 35 PAYCVGARTTAVARGAGISADFVGE--DADALVQALAARR 72
>gi|262341066|ref|YP_003283921.1| uroporphyrinogen-III synthase [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272403|gb|ACY40311.1| uroporphyrinogen-III synthase [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 243
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/245 (8%), Positives = 54/245 (22%), Gaps = 20/245 (8%)
Query: 1 MYI---VITRPIKKALR--TQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAI 52
M I +I++P+ + + S + +
Sbjct: 1 MKINNILISQPLSGGSDSPYLKLCKNKNVKIDFRSFIEVKGASSSDIRKQKINFSDFTVV 60
Query: 53 AITSSESLSTL------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
S +S+ + + + QK + I
Sbjct: 61 LFISKKSVDHYFRLAKSMRFKVPISMKYICQTETIAYYLQKYIVYRKRKIHIGNKSFQDI 120
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ + + + L + I + Y + +
Sbjct: 121 LPYINKYPK-EKFFLPSSDILKPEIPNMLNKLNIFWKRGILYKTTSSDLSD----LKHIC 175
Query: 167 ADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F++ + + F + N A + + P+ S+
Sbjct: 176 YDILVFFSPAEIKSLFENFPNFDQNGIKIATFGKNTLDAASKAGLKIDIKVPTPEFPSMA 235
Query: 226 KLLPL 230
L
Sbjct: 236 MALEK 240
>gi|332796305|ref|YP_004457805.1| Uroporphyrinogen III synthase HEM4 [Acidianus hospitalis W1]
gi|332694040|gb|AEE93507.1| Uroporphyrinogen III synthase HEM4 [Acidianus hospitalis W1]
Length = 220
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 71/234 (30%), Gaps = 23/234 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I+ RP + + + +P+ I L + ++Y A TSS ++
Sbjct: 1 MRILFLRPEGSNIPKVDF-----AEVINIPIFSPICIDYPS-LPLTEAY---AFTSSNAV 51
Query: 61 STLPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ IF+IG+++A G ++ +S++LA+ I +
Sbjct: 52 KCFHDFDKIKGKQIFSIGKSTAKELMAHGINSLYPPNYDSLDLAEFI-------KSKGIK 104
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSS 177
+ + + I I Y + K+ L+N ++ +
Sbjct: 105 SLTAIRSKKASNDLKNSLQNIEYHEIYDYDTIINKEELEKSKDYLENCKIDVVVLTSSEI 164
Query: 178 VLYFFSLPLPAKISAAFLCLSN-NIASAIPASYKNVVTVACFPKETSLLKLLPL 230
S + + + + + + ++ L+
Sbjct: 165 AKAVASSLKNC---YKIVSIGPMTTKTILSLRPDLKIFQSKIYDIEGVIDLIKR 215
>gi|225389492|ref|ZP_03759216.1| hypothetical protein CLOSTASPAR_03240 [Clostridium asparagiforme
DSM 15981]
gi|225044435|gb|EEG54681.1| hypothetical protein CLOSTASPAR_03240 [Clostridium asparagiforme
DSM 15981]
Length = 206
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 58/205 (28%), Gaps = 25/205 (12%)
Query: 52 IAITSSESLSTLPANFCR---------HTPIFAIGEASACLARQKGFTQIFHGK-DNSIN 101
I TS+ + + +G +A + GF + + +
Sbjct: 2 IVFTSANGVRLFFDGLLKSGRDFRALGQVKFAVVGPGTAGELLKYGFRADYMPRVYRTRE 61
Query: 102 LAKIIVEQK----------VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
LA+++ + ++ + + + L + I Y
Sbjct: 62 LAELLAQVCQNEGGGIKPTAREGMLPRILIPRSRGGSPELTEILSRAGVAFDDIVLYD-V 120
Query: 152 DIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPA 207
P + D I F + S V +F + +C+ + A A+ +
Sbjct: 121 TGGLPGGDAAGPQTDCDYITFASASGVEAYFEQMGGEAMERLADSRTVCIGDVTAGALES 180
Query: 208 SYKNVVTVACFPKETSLLKLLPLRR 232
+ V +A + + + R
Sbjct: 181 HGRRVDVLAKDFTVRGMAEAILNDR 205
>gi|111023331|ref|YP_706303.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain-containing protein [Rhodococcus jostii RHA1]
gi|110822861|gb|ABG98145.1| possible transcriptional regulator [Rhodococcus jostii RHA1]
Length = 385
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/258 (10%), Positives = 54/258 (20%), Gaps = 44/258 (17%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITSSESLSTLP 64
+A + + G V P I + L + T+
Sbjct: 19 RAEEFATLLTRRGATVVHAPAIRIIPLADDTELERVTRQIIDNPPEIVVATTGIGFRGWM 78
Query: 65 ANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ + A G + R + + S A+++
Sbjct: 79 EAADGWGEAEELGRALAASRLLARGPKAKGAIRAADLREEWSPASESS--AEVLDHLLGE 136
Query: 113 FTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--- 164
K + F + L + + Y + + +
Sbjct: 137 GVEGKRIAVQLHGATTEWEPVADFCEVLRCAGADVIAVPVYRWTPLEDQAPMDRMIELIA 196
Query: 165 -QNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVV 213
DA+ F + +V + + C+ A +
Sbjct: 197 SGGLDAVSFTSAPAVASLLTRAKETGMIEMVLHSFRHRVLAACVGPVTAGPLRELEVPTT 256
Query: 214 TVACFPKETSLLKLLPLR 231
A S L L
Sbjct: 257 MPAR-----SRLGALARH 269
>gi|296167538|ref|ZP_06849890.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897160|gb|EFG76769.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 383
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/266 (8%), Positives = 58/266 (21%), Gaps = 43/266 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T +++ + + G P I + L + +
Sbjct: 13 RIAVT-SARRSEELCALLSRHGAEVCSAPAINMIALPDDDELHRNTEALIAEPPDILVAH 71
Query: 56 SSESLSTLPANFCRH-------------TPIFAIGEASACLARQKGFTQIFHGKDNSINL 102
+ A + +A+ L + ++S +
Sbjct: 72 TGIGFRGWLAAAEGWGLVNPLVAALSSARIVSRGPKATGALRAAGLHEEWSPESESSQEV 131
Query: 103 AKIIVEQ--KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+ ++ L + F L + + Y + T
Sbjct: 132 LEYLLRSGVTGLRVAVQLHGAADAWDPFPEFLGGLRLAGAEVVPVRVYRWKPTPLGGTFD 191
Query: 161 KNLL----QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIP 206
+ + + DA+ F + + L + +C+ + +
Sbjct: 192 QLVTGIAGRQFDAVTFTSAPAAAAVLERSRELDVEDELLGALRTDVHAMCVGPVTSKPLI 251
Query: 207 ASYKNVVTVACFPKETSL-LKLLPLR 231
+ L L
Sbjct: 252 RKGV------PTSSPERMRLGALARH 271
>gi|169630601|ref|YP_001704250.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium abscessus ATCC 19977]
gi|169242568|emb|CAM63596.1| Possible transcriptional regulatory protein [Mycobacterium
abscessus]
Length = 384
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/266 (9%), Positives = 56/266 (21%), Gaps = 45/266 (16%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I +T +++ +++ G V I + L + +
Sbjct: 15 IGVT-AARRSEELIALLERRGAAVVHAAAIRIIPLADDAELRDATE--LVIANPPDLTVA 71
Query: 63 LPANFCRHTPIFAIGEASA------------------CLARQKGFTQIFHGKDNSINLAK 104
R A A + S + A+
Sbjct: 72 TTGIGFRGWIEAADEWGVADGLKSALESGRLVARGPKATGAIRQAGLREEWSPASESSAE 131
Query: 105 IIVEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
++ + + + L + + Y +
Sbjct: 132 VLDRLLEEGVEGRRIAVQLHGAATEWEPIADLCEALTIAGAQVIRVPVYRWEPPEDQRPM 191
Query: 160 MK----NLLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAI 205
+ + D I F + +V L + A LC+ A+ +
Sbjct: 192 DRLISMAINAELDGISFTSAPAVASMLGRAKATGRLDELLAALRARVAPLCVGPVTAAPL 251
Query: 206 PASYKNVVTVACFPKETSLLKLLPLR 231
V E + L L
Sbjct: 252 EVLG-----VPTTQPERARLGALARH 272
>gi|15645838|ref|NP_208016.1| uroporphyrinogen-III synthase [Helicobacter pylori 26695]
gi|2314387|gb|AAD08269.1| uroporphyrinogen III cosynthase (hemD) [Helicobacter pylori 26695]
Length = 226
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLKMLQNIPAYALSEPTAKTLQDHHFKVAFMG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEIFPLLEKKSVLYLRAKEIVSSLDTILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + +A
Sbjct: 150 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIPS-YIAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|226365838|ref|YP_002783621.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Rhodococcus opacus B4]
gi|226244328|dbj|BAH54676.1| hypothetical protein [Rhodococcus opacus B4]
Length = 385
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/256 (10%), Positives = 52/256 (20%), Gaps = 40/256 (15%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITSSESLSTLP 64
+A + + G V P I + L + T+
Sbjct: 19 RAEEFATLLTRRGATVVHAPAIRIIPLADDTELERVTRQIIDNPPEIVVATTGIGFRGWM 78
Query: 65 ANFCRHTPIFAIGEASA----------CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+G A A + S + A+++
Sbjct: 79 EAADGWGEAEELGRALASSRLLARGPKAKGAIRAADLREEWSPASESSAEVLDHLLGEGV 138
Query: 115 PQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----Q 165
K + F + L + + Y + + +
Sbjct: 139 EGKRIAVQLHGATTEWEPVADFCEVLRCAGADVIAVPVYRWTPLEDQAPMDRMIELIASG 198
Query: 166 NADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVVTV 215
DA+ F + +V + + C+ A +
Sbjct: 199 GLDAVSFTSAPAVASLLTRAKETGMIEMVLHSFRHRVLAACVGPVTAGPLRELEVPTTMP 258
Query: 216 ACFPKETSLLKLLPLR 231
A S L L
Sbjct: 259 AR-----SRLGALARH 269
>gi|310943011|pdb|3P9Z|A Chain A, Crystal Structure Of Uroporphyrinogen-Iii Synthetase From
Helicobacter Pylori 26695
Length = 229
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 58/194 (29%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + +
Sbjct: 33 LDPTPFNALIFTSKNAVFSLLETLKNSPKLKXLQNIPAYALSEPTAKTLQDHHFKVAFXG 92
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ +K ++YL K + L+EH I + Y ++ +
Sbjct: 93 EKAHGKEFVQEIFPLLEKKSVLYLRAKEIVSSLDTILLEHGIDFKQAVVYENKLKHLTLS 152
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + +A
Sbjct: 153 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIPS-YIAKK 211
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 212 PSLEACLELALSLR 225
>gi|150865639|ref|XP_001384948.2| Uroporphyrinogen-III synthase (UROS) (Uroporphyrinogen-III
cosynthetase) (Hydroxymethylbilane hydrolyase
[cyclizing]) (UROIIIS) [Scheffersomyces stipitis CBS
6054]
gi|149386895|gb|ABN66919.2| Uroporphyrinogen-III synthase (UROS) (Uroporphyrinogen-III
cosynthetase) (Hydroxymethylbilane hydrolyase
[cyclizing]) (UROIIIS) [Scheffersomyces stipitis CBS
6054]
Length = 259
Score = 58.3 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/231 (15%), Positives = 73/231 (31%), Gaps = 23/231 (9%)
Query: 19 IQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAI------AITSSESLSTLPANFCRHTP 72
+ G+ P +PL H L +S + ITS ++ L
Sbjct: 24 FLENGFCPEFLPLLTHRHFDRERTLEYLRSSEFVDEIPVFIITSQRAVEMLGDCLSSLEQ 83
Query: 73 I----------FAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTPQKPLI 120
+ +G A+ + + GF+ I G+ N LA++I E+ + ++
Sbjct: 84 EVKKKILSKIGYTVGPATFSVLKTLGFSSIRGGERAGNGSKLAELIHEEVGDIST--RMV 141
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSV 178
+ G R L+E L+ Y ++ N ++ I+F++
Sbjct: 142 FFTGVVRKDIIPRKLMEWNHNLQETVIYTTEVRDDVVKNFTNYIERTSGGWIVFFSPQGT 201
Query: 179 LYFFSLPLPAKISA-AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ S + + + A P +SL + +
Sbjct: 202 ESIVEYIRNQRQSQFKLASIGPTTEEYLLENSIKPDITASKPHASSLYEAI 252
>gi|284926309|gb|ADC28661.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315928019|gb|EFV07339.1| uroporphyrinogen-III synthase HemD family protein [Campylobacter
jejuni subsp. jejuni DFVF1099]
Length = 209
Score = 58.3 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 59/208 (28%), Gaps = 16/208 (7%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL-PANFCRHTPIFAIGEASACLA 84
+ L+ + SV L++ Y A+ TS +L L A + + +
Sbjct: 14 VENLILNEIVFYDFSVDLSL---YDALICTSKNALKALQHAKITLNFKLNLYAVGQSTAQ 70
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
K + + +E + +YL K L + L
Sbjct: 71 YAKNLGFKKIKIPSKAYGKDLFLE-FKEELKMQKCLYLRAKNIVSTLNLDLKNVGVDLDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y + + L +F + SV F + + + + A
Sbjct: 130 MIVYENVFKKGDKK-----LIYPAIFIFTSPLSVANFLKFYSLKEED-KVVVIGQSTAKK 183
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + SLL + L +
Sbjct: 184 L--LNFKNLYICE---NQSLLDCVKLAK 206
>gi|467051|gb|AAA17235.1| B2168_C2_224 [Mycobacterium leprae]
Length = 116
Score = 58.3 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 16/65 (24%)
Query: 167 ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
DA+ F + S+V + C+ A V L+
Sbjct: 32 FDAVCFTSSSTVRNLVGIAGKPHARTVIACIGPKTAETASEFGLRVDVQPETAAVGPLVD 91
Query: 227 LLPLR 231
L
Sbjct: 92 ALAEH 96
>gi|332674025|gb|AEE70842.1| uroporphyrinogen-III synthase [Helicobacter pylori 83]
Length = 226
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLQILQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEIIPLLEKKSVLYLRAKEIASSLDAILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + A
Sbjct: 150 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEKGIQS-YTAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|316935594|ref|YP_004110576.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
DX-1]
gi|315603308|gb|ADU45843.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
DX-1]
Length = 283
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/269 (9%), Positives = 58/269 (21%), Gaps = 41/269 (15%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIA 53
I+I TR + + + G + P+ + + + +
Sbjct: 9 RILILETREEAQ---FARLLAEQGADVLQCPMFEIRDAPDPAPVSAWIDRLIAAPFDDLV 65
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + E L L A A + + +
Sbjct: 66 LLTGEGLRRLTRLARATGCEQAFVAAVGEARTFIRGPKPGRALREIGLEPAVTADAPTSD 125
Query: 114 TPQKPLIYL-----------GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
L + + D + + + Y A +T +
Sbjct: 126 GVAATLRRYDLAGRRVGLQLYPERDHAALIDAITSRGATVDAVLSYAYDAGAAEQTVVTA 185
Query: 163 L----LQNADAILFYARSSVLYFF---------SLPLPAKISAAFLCLSNNIASAIPASY 209
+ DA+ + V F A + + + + A
Sbjct: 186 IDEMAQGRVDALALTSSGQVRRLFDVARAHGCEQRLRDALRATPIASVGPVVTDELAAHG 245
Query: 210 KNVVTVAC------FPKETSLLKLLPLRR 232
V P +++ RR
Sbjct: 246 FAPTIVPANDAFFMKPLIVAMIGAFERRR 274
>gi|255536549|ref|YP_003096920.1| uroporphyrinogen-III synthase HemD, putative [Flavobacteriaceae
bacterium 3519-10]
gi|255342745|gb|ACU08858.1| uroporphyrinogen-III synthase HemD, putative [Flavobacteriaceae
bacterium 3519-10]
Length = 248
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 61/245 (24%), Gaps = 21/245 (8%)
Query: 1 MYI---VITRPIK-KALRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIA 53
M I ++++P ++ E +K P + + I
Sbjct: 3 MKIKSILVSQPAPNESSPYLEMAKKEKIRIDFRPFIHVEGVDAKELRTQKIDLSQFTGII 62
Query: 54 ITSSESLSTLPANFCRH-------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
TS ++ EA A ++ + N A ++
Sbjct: 63 FTSKNAIDHYFRLAEEMRFAVPDSMRYICQSEAIANYLQKHIVYRKRKISFGERNFADLL 122
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
K P + + G+ + L I Y + + +
Sbjct: 123 PLFKKF--PTEKYLIPAGETLSADTVKVLDSSSIDWTRATMYRTVSSDLSDIKLDEY--- 177
Query: 167 ADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
D ++F++ + + + A + V +A + S+
Sbjct: 178 -DMLVFFSPQGIRSLGTNFKDFVQNDTKIAVFGTTTEMAAKEAGLVVNVMAPSKESPSMT 236
Query: 226 KLLPL 230
+
Sbjct: 237 MAIEK 241
>gi|86152931|ref|ZP_01071136.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613591|ref|YP_001000758.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
81-176]
gi|157415341|ref|YP_001482597.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
81116]
gi|167005678|ref|ZP_02271436.1| uroporphyrinogen-III synthetase [Campylobacter jejuni subsp. jejuni
81-176]
gi|85843816|gb|EAQ61026.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249228|gb|EAQ72189.1| uroporphyrinogen-III synthase [Campylobacter jejuni subsp. jejuni
81-176]
gi|157386305|gb|ABV52620.1| uroporphyrinogen-III synthetase [Campylobacter jejuni subsp. jejuni
81116]
Length = 209
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 60/208 (28%), Gaps = 16/208 (7%)
Query: 26 PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPA-NFCRHTPIFAIGEASACLA 84
+ L+ I S+ L++ Y A+ TS +L L + + +
Sbjct: 14 VENLILNEIIFYDFSIDLSL---YDALICTSKNALKALQNAKITLNFKLNLYAVGQSTAQ 70
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
K + + +E + +YL K L + L
Sbjct: 71 YAKNLGFKKIKIPSKAYGKDLFLE-FKEELKTQKCLYLRAKNIVSTLNLDLKNVGVDLDE 129
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
+ Y + + L + +F + SV F + + + + A
Sbjct: 130 VIVYENVFKKGDKK-----LTHPAIFIFTSPLSVENFLKFYSLKEED-KVVVIGQSTAKK 183
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + SLL+ + L +
Sbjct: 184 L--LNFKNLYICE---NQSLLECVKLAK 206
>gi|297561132|ref|YP_003680106.1| uroporphyrinogen III synthase HEM4 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296845580|gb|ADH67600.1| Uroporphyrinogen III synthase HEM4 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 391
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/257 (8%), Positives = 57/257 (22%), Gaps = 32/257 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ------SYGAIAITS 56
+ +T ++A +++ G + P + + LA + T+
Sbjct: 31 VAVT-AARRAEEISALLRRKGAQVLAAPALRIVPLSDDQRLASVSEQLARRPADVVVATT 89
Query: 57 SESLSTLPANFCRHTPIFA----------IGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ + + S + A+++
Sbjct: 90 GIGFRGWVEACETWGTVDPLLASLRTSRLLARGPKAKGAIRAAGLTEEWSPPSESSAEVL 149
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--- 163
+ F L + + Y + +
Sbjct: 150 DYLLARGVRGLRVAIQLHGEPLPDFTAALRLAGADVVEVPVYRWTLPEDTAPLDRLIEAV 209
Query: 164 -LQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNV 212
DA+ F + + +L + +C+ A + A
Sbjct: 210 TNGGVDAVTFTSAPAAAGLLARAHTTGHQAALVRALRGDVLAMCVGAVTARPLMAHDIPT 269
Query: 213 VTVACFPKETSLLKLLP 229
V + + ++ L
Sbjct: 270 VW-PQRARVGAQVRALA 285
>gi|330937206|gb|EGH41227.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 178
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 54/172 (31%), Gaps = 11/172 (6%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESTALARVLAEDGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHT------PIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQK 110
+ P F++G A+ + G + + + L ++ ++
Sbjct: 65 PAARLAIELIDEVWPQPPLQPWFSVGSATGQILLDYGLDASWPEQGDDSEALLELPRLKQ 124
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
+ P ++ + G + L + + + Y + +
Sbjct: 125 AIAVPGSRVLIMRGDEGRELLAEQLRALGVGVDYLPLYRRYLPQHAPGALAQ 176
>gi|298373167|ref|ZP_06983157.1| uroporphyrinogen-III synthase HemD [Bacteroidetes oral taxon 274
str. F0058]
gi|298276071|gb|EFI17622.1| uroporphyrinogen-III synthase HemD [Bacteroidetes oral taxon 274
str. F0058]
Length = 254
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 69/237 (29%), Gaps = 19/237 (8%)
Query: 2 YIVITRPIKKA---LRTQEKIQKMGYIPVMMPLSYFIHDRESVF---LAMQQSYGAIAIT 55
I+I++P + + K V P + F +Y AI
Sbjct: 6 NILISQPKPEEGIKSPYLDIAAKYDVNVVFRPFIKVEGYTLNEFSKQKLDIPNYSAIVFV 65
Query: 56 SSESLSTLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + F + E+ A ++ + +
Sbjct: 66 ARTGVDQFFRLAKEGKVKIVPEMKYFCLNESFAFYIQKYIKFRKRKIFSAPTGRLNELFA 125
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ +++ + N + +L + KI Y S + + ++ N D
Sbjct: 126 MIEKNAN-EKFLFILPQTGNEEVDKFLEKSKINYDRAIMYRSVNNEFG----RSEKFNYD 180
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFL-CLSNNIASAIPASYKNVVTVACFPKETSL 224
++F++ V + + CL + A AI + V P+ +S+
Sbjct: 181 MVIFFSPLGVQSLLKSFPKFEQGEIYFGCLGASAAQAIRDAGFRVDLEVPNPQFSSM 237
>gi|227538630|ref|ZP_03968679.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC
33300]
gi|227241549|gb|EEI91564.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC
33300]
Length = 528
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 64/230 (27%), Gaps = 17/230 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I I+R I + + K L + + + + S +
Sbjct: 305 IFISRDIDENTYFARAMAKHNIQLDARSLIRIYPIINKLDPFILKHVDWVFFASRNGIDH 364
Query: 63 LP---ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+HT I +G S R+ D+ I + + +
Sbjct: 365 FFSLDPQLRKHTRIGVVGRGSEEALRKYD-RVADFSGDDFGIHTDEIGLEFAKIANGQTV 423
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
++ K + + + + Y + T +L +F + S+V
Sbjct: 424 LFPRAKDSLETIQKAMSAD-TKIIDMPVYETVLDENVAATTAEVL------IFTSPSNVE 476
Query: 180 YFF--SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+F +L P + + + + + I V P E L +
Sbjct: 477 AYFIDNLIEPGQQ---IISIGKSTGAKIAEMGLPYV-TPYSPDEIGLTEA 522
>gi|217032236|ref|ZP_03437734.1| hypothetical protein HPB128_2g38 [Helicobacter pylori B128]
gi|298735757|ref|YP_003728282.1| uroporphyrinogen-III synthase [Helicobacter pylori B8]
gi|216946107|gb|EEC24718.1| hypothetical protein HPB128_2g38 [Helicobacter pylori B128]
gi|298354946|emb|CBI65818.1| uroporphyrinogen-III synthase [Helicobacter pylori B8]
Length = 226
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDLTPFNALIFTSKNAVFSLLETLKNSPKLKMLQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ ++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFAKEIIPLLEKKSVLYLRAKEIASSLDAILLEHGINFQQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + +A
Sbjct: 150 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIPS-YIAQK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|307331139|ref|ZP_07610266.1| Uroporphyrinogen III synthase HEM4 [Streptomyces violaceusniger Tu
4113]
gi|306883219|gb|EFN14278.1| Uroporphyrinogen III synthase HEM4 [Streptomyces violaceusniger Tu
4113]
Length = 388
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/236 (10%), Positives = 60/236 (25%), Gaps = 35/236 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSE 58
+T ++A +Q+ G + P + + L + + + T++
Sbjct: 25 VT-AARRADELGALLQRRGAAVMHAPALRIVPLADDSELMAATKQLIDHAPHVVIATTAI 83
Query: 59 SLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ A G R G T+ ++ S ++A+++
Sbjct: 84 GFRGWVEAADGWGLGDALLDRLREVRLLARGPKVRGAIRAAGLTEEWYPP--SESMAEVL 141
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+ + F + L + + Y +
Sbjct: 142 DRLLEEGVEGQRIAIQLHGEPLPGFVESLRAGGAEVVGVPVYRWMPPEDIGPVDRLLDAT 201
Query: 163 LLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPAS 208
+ + DA+ F + + L + C+ A + A
Sbjct: 202 VARALDAVTFTSAPAAASLLDRAERRGMREELLDALRHDVLAACVGPVTALPLEAH 257
>gi|325109393|ref|YP_004270461.1| uroporphyrinogen III synthase HEM4 [Planctomyces brasiliensis DSM
5305]
gi|324969661|gb|ADY60439.1| Uroporphyrinogen III synthase HEM4 [Planctomyces brasiliensis DSM
5305]
Length = 267
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/252 (9%), Positives = 62/252 (24%), Gaps = 33/252 (13%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ------SYGAIAITSSESLSTLP 64
+ + I + G P + P + E+V + + + STL
Sbjct: 12 RCEEMESMISRFGGNPTVAPSMREVPLEENVIAEEFATRLCNGEFEVVVFMTGVGASTLF 71
Query: 65 ANFCRHTPIFAIGEASACLAR-----------QKGFTQIFHGKDNSINLAKIIV--EQKV 111
+ + A + I + +++ + +
Sbjct: 72 EAVQKTSDWDKFHAALDKRMILVRGPKPVPVLRSHKVHIDYRAPEPNTWRELLAGIDSEQ 131
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE----TTMKNLLQNA 167
+ K + N F D L + + Y + E +++
Sbjct: 132 IDLKGKTVAIQEYGKPNQDFYDELAARGATVYPVPVYRWEFPTDLEPLNGAIRESVETGF 191
Query: 168 DAILFYARSSVLYFFSLPLPAKISAA---------FLCLSNNIASAIPASYKNVVTVACF 218
D ++F + + V ++ + + +
Sbjct: 192 DVVMFTSANQVDNVLEAARRLELEDKFRLSLKNACIASIGPTCSERLVELGLPPAFEPSH 251
Query: 219 PKETSLL-KLLP 229
PK L+ + L
Sbjct: 252 PKMAHLIREALE 263
>gi|307721701|ref|YP_003892841.1| Uroporphyrinogen III synthase HEM4 [Sulfurimonas autotrophica DSM
16294]
gi|306979794|gb|ADN09829.1| Uroporphyrinogen III synthase HEM4 [Sulfurimonas autotrophica DSM
16294]
Length = 211
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 14/186 (7%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT---PIFAIGEASA 81
+ + + + Y + ITS ++ L + P I + SA
Sbjct: 14 DAISINSLDITFLQPEID---FSKYDYLIITSKQASKALQEYNKKEYINKPALCISKQSA 70
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
G + G NL + I F +K +YL K F E
Sbjct: 71 KSFEDLGGQVLAVGGGYGDNLIEQI----KSFPKEKKWLYLRAKIVASDFVFTCKEDGYV 126
Query: 142 LRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNI 201
+ Y S + + ++F + SSV F + + +
Sbjct: 127 IGEKVVYESDCSGAIDNVTVQ---DDAVLIFTSPSSVKCFLKN-HSLLHTHKIIVIGKTT 182
Query: 202 ASAIPA 207
A AIP
Sbjct: 183 AKAIPK 188
>gi|308183329|ref|YP_003927456.1| uroporphyrinogen-III synthase [Helicobacter pylori PeCan4]
gi|308065514|gb|ADO07406.1| uroporphyrinogen-III synthase [Helicobacter pylori PeCan4]
Length = 217
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 60/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 24 LDPTPFNALIFTSKNAVFSLLETLKNSAKLKILQNIPAYALSEPTAKTLQDHHFKVAFIG 83
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 84 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASSLDTILLEHGIDFQQAVVYENKLKHLTLS 143
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F S + + N A + +A
Sbjct: 144 EQNALKPKEKSVLIFTAISHAKAFLHYFEFLKSYTAISIGNTTAHYLQEKGIQS-YIAQK 202
Query: 219 PKETSLLK-LLPLR 231
P + L+ L L+
Sbjct: 203 PSLEACLELALSLK 216
>gi|18313454|ref|NP_560121.1| uroporphyrinogen-III synthase (hemD), conjectural [Pyrobaculum
aerophilum str. IM2]
gi|18160990|gb|AAL64303.1| uroporphyrinogen-III synthase (hemD), conjectural [Pyrobaculum
aerophilum str. IM2]
Length = 235
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/216 (10%), Positives = 49/216 (22%), Gaps = 11/216 (5%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSY--FIHDRESVFLAMQQSYGAIAITSSE 58
M +V+T P ++ G + P+ + + + + S
Sbjct: 1 MRVVVTSPFA-GEAFTRVLK--GVEVAVAPVLKLMPVKVEGEAVASAVSNSDLVVFVSGR 57
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ L R A + R+ +A E L +
Sbjct: 58 AAYRLREEGIRLDL--AGKIVATAEGRKGAVMVKNAFGVEPQLVADSAEELARLIESCRV 115
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
R L Y + + L + +F++ +
Sbjct: 116 ATVFHHGERAEELMKRLSSLCSRAYEFFTYRAVP----DDEALRALPPGEVYVFFSALAA 171
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVT 214
+ A + + +A+ N
Sbjct: 172 ELVAARRRDVLERAVIIAAGPAVKAALEKHGLNAAV 207
>gi|58040314|ref|YP_192278.1| putative uroporphyrinogen-III synthase [Gluconobacter oxydans 621H]
gi|58002728|gb|AAW61622.1| Putative uroporphyrinogen-III synthase [Gluconobacter oxydans 621H]
Length = 215
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/214 (12%), Positives = 63/214 (29%), Gaps = 19/214 (8%)
Query: 6 TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPA 65
TRP T +++ +G+ V P+ + ++ A+ +TS+ +L L
Sbjct: 2 TRPEPGLSATMAEVRALGWEAVACPMLDI----TTFESVAPGAFRAVLVTSANALPALRD 57
Query: 66 NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ + ++ A F + ++
Sbjct: 58 WPRDRLVVAVGART---------AARARKAGFVNVEAADGDARALAAFCRARGILGADVL 108
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILFYARSSVLYFFS 183
+ + + ++ ++ Y + L+ +L Y+ + F
Sbjct: 109 LASGDGYGVDLARDLGVQRVEVYAACKREALPGDAAEALRGGRVDSVLLYSGKTAEAFRE 168
Query: 184 LPLPAKI----SAAFLCLSNNIASAIPASYKNVV 213
++ + LCLS IA+ + V
Sbjct: 169 ALGAEEVTALSAVRALCLSEAIAARLDPQEWRAV 202
>gi|322487955|emb|CBZ23201.1| hypothetical protein LMXM_03_0680 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 286
Score = 57.9 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/263 (11%), Positives = 65/263 (24%), Gaps = 47/263 (17%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-----LAMQQSYGAIAITS 56
I+IT P + R + ++ IP+ +P+ + ++ IA S
Sbjct: 5 RILITAPEVYSKRFAQALEARSLIPMAVPVVETVATPDTADMRALLEQDLNGIDYIAFCS 64
Query: 57 SESLSTL-----PANFCRHTPIFAIGEASACLARQ------------------------- 86
++ +L R P+ ++ +
Sbjct: 65 RCAVDSLSAALDHRYGHRGEPVSERVGSTPAVDEDRRATTVVKVLAKCALAAIGKDADYV 124
Query: 87 ----KGFTQIFHGKDNSINLAKIIVEQKVLFTPQ-----KPLIYLGGKPRNFHFEDYLIE 137
I + + +A + E + F D L
Sbjct: 125 LERLCIRPVICPDEPSPAGIAAKLAESGRAEGRTIAVLAPCVEGFAEPDVVPRFVDQLKG 184
Query: 138 HKIPLRVIDCYYSQDI---AYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAF 194
+ + +D Y ++ + A + ++ F + + ++
Sbjct: 185 MGMRVVRVDAYVTRPVGEEAVSAAVAALTNGSVRSVAFTSAGEIAVLLRRSPQCLMNIDV 244
Query: 195 LCLSNNIASAIPASYKNVVTVAC 217
C A V VA
Sbjct: 245 ACFGPYTAGFAAKHGIKVSCVAK 267
>gi|238061066|ref|ZP_04605775.1| uroporphyrinogen III synthase HEM4 [Micromonospora sp. ATCC 39149]
gi|237882877|gb|EEP71705.1| uroporphyrinogen III synthase HEM4 [Micromonospora sp. ATCC 39149]
Length = 362
Score = 57.9 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 16/228 (7%), Positives = 47/228 (20%), Gaps = 28/228 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPAN 66
+Q+ G V+ P + + L + + + +
Sbjct: 19 DELAALLQRRGARVVIAPALRIVPLTDDTDLREATRECLTRQPDVLMANTGIGMRGWLEA 78
Query: 67 FCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + +S + +++
Sbjct: 79 AEGWGLAEPLRGVLSQAYVVARGPKARGAIRAAGLHDQWSPDSESCEEVVEHLVRRGVAG 138
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAILF 172
+ + R + L + + + Y P + + + DA+ F
Sbjct: 139 QVIAMQLHGDRQPECTNALEDAGATVIEVPVYRWAPPTDPAPLHRLIDLVAGRLVDAVTF 198
Query: 173 YARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPASYKNV 212
+ + C+ A + V
Sbjct: 199 TSAPAAEALLRAAGDRTETVLEALRGDVLASCVGAVTAEPLIRRGVPV 246
>gi|262341331|ref|YP_003284186.1| uroporphyrinogen-III synthase [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272668|gb|ACY40576.1| uroporphyrinogen-III synthase [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 224
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 47/177 (26%), Gaps = 7/177 (3%)
Query: 52 IAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ TS + NF I + + + I+E+ +
Sbjct: 45 LIFTSYNGVKGFLYNFEYCFFRKKIYVVGEKTFF-FLKKHFPYCFFFQKDYVQDIIEEII 103
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
+ + G F+ + + K + + Y + I L + I+
Sbjct: 104 KTKSNQYYDWFCGNKNIFNQDINFFKEK-NINRYEVYKTFLIP----RKIKNLSDYHGII 158
Query: 172 FYARSSVLYFFSLPL-PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F++ S V FF + A I + + P + L
Sbjct: 159 FFSPSGVQSFFLNNKIENNTKTEIFAIGKTTAKFISNFLHKKIWIPKKPSLKEVFTL 215
>gi|208435118|ref|YP_002266784.1| uroporphyrinogen III cosynthase [Helicobacter pylori G27]
gi|208433047|gb|ACI27918.1| uroporphyrinogen III cosynthase [Helicobacter pylori G27]
Length = 226
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLKMLQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +++L + S F + + + N A + +A
Sbjct: 150 EQNALKPKEESVLIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIPS-YIAQK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|119964403|ref|YP_947170.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Arthrobacter aurescens TC1]
gi|119951262|gb|ABM10173.1| uroporphyrinogen-III synthase domain protein [Arthrobacter
aurescens TC1]
Length = 385
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/256 (8%), Positives = 59/256 (23%), Gaps = 32/256 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T +++ E +++ G + P +E + L T
Sbjct: 30 RIGVT-SHRRSRDLIEALERRGASVLHAPALKIAPVQEDMVLIDDTRTIIAAKPDICIAT 88
Query: 56 SSESLSTLPANFCRHTP----------IFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
++ + + G + A +
Sbjct: 89 TAYGMRRWCEAADSFGIGEQLLETLSACRMFVRGPKARGAVRAAGLADVGISSDETTATL 148
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ K + + + L + + Y + + +
Sbjct: 149 VDMLLAEGVRGKTVAVQLHGYTDVRQLERLRMSGATVLTVTPYRWVKPDGEDKLPRLIEA 208
Query: 166 ----NADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKN 211
N D + F + +V + L K + A + +
Sbjct: 209 VVSGNLDVLTFTSAPAVDAMWSTAHEMGLYRQLIEALKGPVTVAAVGPVTAQPLVDAGLT 268
Query: 212 VVTVACFPKETSLLKL 227
+ + +L++L
Sbjct: 269 P-LIPDRYRMGALIRL 283
>gi|239930950|ref|ZP_04687903.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces ghanaensis ATCC 14672]
gi|291439327|ref|ZP_06578717.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291342222|gb|EFE69178.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 383
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 54/241 (22%), Gaps = 35/241 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS------YGAIAITSSE 58
+T ++A +++ G + P + + L T++
Sbjct: 20 VT-AARRADELGALLERRGAAVLHAPALRIVPLADDGELLAATEEIIERAPDIAVATTAI 78
Query: 59 SLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
I A G R G + + S +LA+++
Sbjct: 79 GFRGWVEAADGWGLGERLLARLGGVRILARGPKVKGAIRAAGLAEEWSPA--SESLAEVL 136
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ F + L + + Y + L
Sbjct: 137 DRLLAEGVDGLRIAVQLHGEPLPGFVESLRAGGAEVVGVPVYRWLPPEDLGPVDRLLDAT 196
Query: 167 A----DAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNV 212
DA+ F + + S + C+ A + +
Sbjct: 197 VSRTLDAVTFTSAPAAASLLSRAGERGLLDDLVAALGHDVLPACVGPVTALPLQGHGVDT 256
Query: 213 V 213
V
Sbjct: 257 V 257
>gi|260827356|ref|XP_002608631.1| hypothetical protein BRAFLDRAFT_127880 [Branchiostoma floridae]
gi|229293982|gb|EEN64641.1| hypothetical protein BRAFLDRAFT_127880 [Branchiostoma floridae]
Length = 205
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 65/231 (28%), Gaps = 48/231 (20%)
Query: 1 MYIVITR-PIKK--ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAI 54
M I++ R P ++ +++ G + + F ++ + + +
Sbjct: 1 MGILLLREPREEKGTDPYEQEFVAAGLQVKSVEVLSFEFCSLPELRSLVKKPEEFSGMVF 60
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
TS S+ + G T + LA +I ++ +
Sbjct: 61 TSQRSVEAVTRCLQEAR--------------SLGLTPSGEECGTATQLADLITQKFTSNS 106
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
K L++ G R L IPL + Y + + ++ +
Sbjct: 107 --KALLFPCGFMRRETLPSALSAANIPLTELRVYQTTAHPDIDKRLQAYIAEQ------- 157
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
+ A A+ ++ +V A P +LL
Sbjct: 158 -------------------IAAIGPTTAEAMTSAGLSVACTAEKPNPQALL 189
>gi|108797243|ref|YP_637440.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium sp. MCS]
gi|119866328|ref|YP_936280.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain-containing protein [Mycobacterium sp. KMS]
gi|108767662|gb|ABG06384.1| Uroporphyrinogen III synthase HEM4 [Mycobacterium sp. MCS]
gi|119692417|gb|ABL89490.1| Uroporphyrinogen III synthase HEM4 [Mycobacterium sp. KMS]
Length = 382
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/267 (10%), Positives = 59/267 (22%), Gaps = 45/267 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ +T ++A +++ G + + L A+ + +
Sbjct: 13 RVAVT-SARRAEELSALLRRRGATVTSAAAIAMVPLPDDDELR--AHTQALIDAPPDIVI 69
Query: 62 TLPANFCRHTPIFAIGEASAC---LARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP--- 115
R A G A A K A + E+ +
Sbjct: 70 ATTGIGLRGWIAAADGWGVAAELTAALAGARIVSRGPKATGALRAAGLPEEWSPDSESSR 129
Query: 116 ------------QKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
K + F D L + I Y +
Sbjct: 130 EVLRYLLDGGIADKRIAVQLHGATDDWDPFPEFLDELRAAGADVVPIRVYRWRPAPRDGD 189
Query: 159 TMKNLL----QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASA 204
+ + + DA+ F + +V + + + +C+ A
Sbjct: 190 FDQLVAGIAEEKFDAVSFTSAPAVASVLMRATEMGVADRVLTALRTNVHAMCVGPVTARP 249
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLR 231
+ V E L L
Sbjct: 250 LVRLG-----VPTSAPERMRLGALARH 271
>gi|239941642|ref|ZP_04693579.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces roseosporus NRRL 15998]
gi|239988104|ref|ZP_04708768.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces roseosporus NRRL 11379]
gi|291445083|ref|ZP_06584473.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291348030|gb|EFE74934.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 380
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/238 (10%), Positives = 54/238 (22%), Gaps = 35/238 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP 64
+T ++A +++ G + P + + L + + +
Sbjct: 18 VT-AARRAEELGTLLKRRGAAVLHAPALRIVQLADDSELLAATK--ELIGHAPDVAVATT 74
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQ------------------IFHGKDNSINLAKII 106
A R A G Q S ++A+++
Sbjct: 75 AIGFRGWIEAADGWGIGDALLQTLRGVELLARGPKVKGAIRAAGLTETWSPGSESMAEVL 134
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+ + F + L + V+ Y +
Sbjct: 135 DRLLAEGVAGRRVALQLHGEPLPGFVESLTAAGAEVVVVPVYRWMPPQDIAPLDRMLDVT 194
Query: 163 LLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYK 210
+ DAI F + + F + + C+ A + A
Sbjct: 195 AARGLDAITFTSAPAAASFLGRAETRGLLPEILGALRDDVLVACVGPVTALPLQARGI 252
>gi|126432866|ref|YP_001068557.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium sp. JLS]
gi|126232666|gb|ABN96066.1| Uroporphyrinogen III synthase HEM4 [Mycobacterium sp. JLS]
Length = 382
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/267 (10%), Positives = 59/267 (22%), Gaps = 45/267 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ +T ++A +++ G + + L A+ + +
Sbjct: 13 RVAVT-SARRAEELSALLRRRGATVTSAAAIAMVPLPDDDELR--AHTQALIDAPPDIVI 69
Query: 62 TLPANFCRHTPIFAIGEASAC---LARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ-- 116
R A G A A K A + E+ +
Sbjct: 70 ATTGIGLRGWIAAADGWGVAAELTAALAGARIVSRGPKATGALRAAGLPEEWSPDSESSR 129
Query: 117 -------------KPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
K + F D L + I Y +
Sbjct: 130 EVLRYLLDGGIAGKRIAVQLHGATDDWDPFPEFLDELRAAGADVVPIRVYRWRPAPRDGD 189
Query: 159 TMKNLL----QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASA 204
+ + + DA+ F + +V + + + +C+ A
Sbjct: 190 FDQLVAGIAEEKFDAVSFTSAPAVASVLMRATEMGVADRVLTALRTNVHAMCVGPVTARP 249
Query: 205 IPASYKNVVTVACFPKETSLLKLLPLR 231
+ V E L L
Sbjct: 250 LVRLG-----VPTSAPERMRLGALARH 271
>gi|229367580|gb|ACQ58770.1| Uroporphyrinogen-III synthase [Anoplopoma fimbria]
Length = 214
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 69/207 (33%), Gaps = 28/207 (13%)
Query: 1 MYIVITRPIKKAL----RTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIA 53
M++++ + + +++ G+ ++P+ F + L + +G
Sbjct: 1 MHVLLLKEPRDGESGPDPYIKELASHGHKATLIPVLSFKFVSLNTLSDKLFQPEKHGGPI 60
Query: 54 ITSSESLSTLPANF----------------CRHTPIFAIGEASACLARQKGFTQIFHGKD 97
TS ++ + I+ +G+A+A R G +
Sbjct: 61 FTSPRAVEAVKMCLEADERREEWNSSVKDKWNSKSIYVVGKATAAAVRNLGLNPLGEDTG 120
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ L+ +I+E++ P PL + G + L + +PL + Y + PE
Sbjct: 121 TADVLSSLIIEREDTNIP--PLFFPCGSIKREVLPTALRGNGVPLETLTVYQTAKHPDPE 178
Query: 158 TTMKNLLQNADAI---LFYARSSVLYF 181
+ N F++ S
Sbjct: 179 KNLNNYFTEQGTPASIAFFSPSGSEVL 205
>gi|313680476|ref|YP_004058215.1| uroporphyrinogen III synthase hem4 [Oceanithermus profundus DSM
14977]
gi|313153191|gb|ADR37042.1| Uroporphyrinogen III synthase HEM4 [Oceanithermus profundus DSM
14977]
Length = 236
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 67/227 (29%), Gaps = 16/227 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ--QSYGAIAITSSESL 60
+V+TR +K ++ G +PL + LA +++ +A+TS +
Sbjct: 4 VVLTRNPEKDRELARRLDAFGVPYASVPLLEHAPGPDFPDLAGALGEAWAWVAVTSPTAA 63
Query: 61 ----STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
A + A+G +A + G T F +
Sbjct: 64 GFLARAWEAAGRPALRVAALGGGTARALERAGLTPEFTAPEAYGRALA------ETLPEP 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
PL++ L +R +D Y ++ + L A A + +
Sbjct: 118 GPLLWPTSSRAGEELGRVLEARGFRVRRLDAYTTRPRPLAPEEVARLEAAAVAAVASPSA 177
Query: 177 SVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + ++A + A A A+ V P
Sbjct: 178 VAAWVRAAAARPPLAA----IGRVTAEAARAAGFVCVVWPERPGVAG 220
>gi|241952382|ref|XP_002418913.1| uroporphyrinogen-III synthase [Candida dubliniensis CD36]
gi|223642252|emb|CAX44220.1| uroporphyrinogen-III synthase [Candida dubliniensis CD36]
Length = 266
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 63/231 (27%), Gaps = 26/231 (11%)
Query: 24 YIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPANFCR-------- 69
Y P +PL H +S L+ + ITS ++
Sbjct: 27 YKPNFVPLLTHCHKDKSQTLSFLISDEFLNNIPIFIITSQRAVEMFKECIEELDHDIREK 86
Query: 70 -HTPIFAIGEASACLARQKGFTQIFHGKD---NSINLAKIIVEQKVLFTPQKPLIYLGGK 125
+ I + + + G D N LA +I + + + + G
Sbjct: 87 IYQKIGYTVGPATYKILKSVGFKDVRGGDEAGNGSKLADLIKQDTIGRENIPMVFFTGVI 146
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----NADAILFYARSS---- 177
++ + + Y + D K ++Q + I+F++
Sbjct: 147 RKDIIPMKLINSGYDNFQEFILYQTGDRLDIIDNFKKVIQGLDKDDVWIVFFSPQGTKEI 206
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
V Y + + + + ++ P +L + +
Sbjct: 207 VNYLMNSSSNQNQNWKIASIGPTTRDYLKDFDLTPHVISPKPDPEALFETI 257
>gi|311744176|ref|ZP_07717981.1| uroporphyrinogen-III synthase domain protein [Aeromicrobium marinum
DSM 15272]
gi|311312531|gb|EFQ82443.1| uroporphyrinogen-III synthase domain protein [Aeromicrobium marinum
DSM 15272]
Length = 382
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/260 (7%), Positives = 65/260 (25%), Gaps = 37/260 (14%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
+++T ++A +++ G + + L + + +T
Sbjct: 23 RVLVT-AQRRASDLALALERRGAEVSVAAALGVESHIDEQTLLDRTRHLIAEGADIVVVT 81
Query: 56 SSESLSTLPANFC------------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ L R + A G + + G + + +
Sbjct: 82 TGIGLRGWLDTAEAAGLGGDLIDALRSVRLVARGPKARGALQAAGLVPDWVAESETSAEI 141
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ + + + + E L + Y +++
Sbjct: 142 ADFLLAEGVDG--LSIAVQHHGAGDDGLETRLAAAGARPYGLVVYRWGPPPDRAVLERSV 199
Query: 164 LQ----NADAILFYARSSVLYFFSLPLPAKI-----------SAAFLCLSNNIASAIPAS 208
+ DA++F + + + A + + A + +
Sbjct: 200 RDTADGSFDAVVFTSAPGAAAWLHVVQAAGVLDEVLRLAKDDRLVVAAVGPVTAEPLRTA 259
Query: 209 YKNVVTVACFPKETSLLKLL 228
+ + + +L++ L
Sbjct: 260 GFDPLL-PERARLGALVRSL 278
>gi|300770169|ref|ZP_07080048.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC
33861]
gi|300762645|gb|EFK59462.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC
33861]
Length = 528
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 65/230 (28%), Gaps = 17/230 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I I+R I + + K L + + + + S +
Sbjct: 305 IFISRDIDENTYFARAMAKHNIQLDARSLIRIYPIINKLDPFILKHVDWVFFASRNGIDH 364
Query: 63 LP---ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+HT I +G S R+ D+ I + + +
Sbjct: 365 FFSLDPQLRKHTRIGVVGRGSEEALRKYD-RVADFSGDDFGIHTDEIGLEFAKIANGQTV 423
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
++ K + + + + Y + +T +L +F + S+V
Sbjct: 424 LFPRAKDSLETIQKAMSAD-TKIIDMPVYETVLDENVASTTAEVL------IFTSPSNVE 476
Query: 180 YFF--SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+F +L P + + + + + I V P E L +
Sbjct: 477 AYFIDNLIEPGQQ---IISIGKSTGAKIAEMGLPYV-TPYSPDEIGLTEA 522
>gi|319763493|ref|YP_004127430.1| uroporphyrinogen-iii synthase [Alicycliphilus denitrificans BC]
gi|317118054|gb|ADV00543.1| uroporphyrinogen-III synthase [Alicycliphilus denitrificans BC]
Length = 274
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 68/263 (25%), Gaps = 41/263 (15%)
Query: 4 VITRPIKKALRTQEKIQKMGYI----------PVMMPLSYFIHDRESVFLAMQQSYGAIA 53
++TRP ++A + +Q G V P + A SY A+
Sbjct: 11 IVTRPAREAAQWVTDLQAHGIAAAALPLIAIGAVADPALR---EALQRARARLGSYRAVM 67
Query: 54 ITSSESLSTLPANFCR-----------HTPIFAIGEASACLARQKGFTQIFH----GKDN 98
S ++ +T ++A G + RQ G
Sbjct: 68 FVSGNAVQYFFEENQAPGLSQKALAAINTRVWAPGPGTVAALRQTGLPASRIDAPGADAA 127
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLG--------GKPRNFHFEDYLIEHKIPLRVIDCYYS 150
+ + +P ++ + G + + + Y
Sbjct: 128 QFDSEALWQVVAPQISPGDRVLVVRGSSAPAAEGGNGREWLAGQIGAAGGAVDFVAAYER 187
Query: 151 QDIAYPETTM---KNLLQNADAILFYARSSVLYF-FSLPLPAKISAAFLCLSNNIASAIP 206
+ + + L + +V + +LP A L IA A
Sbjct: 188 RAPRLDAAGQALARTAAGDGSLWLLSSSEAVTHLAAALPGQDWSRARALATHPRIAQAAR 247
Query: 207 ASYKNVVTVACFPKETSLLKLLP 229
A+ V P ++ +
Sbjct: 248 AAGFGTVLEC-RPSFAEVVASIE 269
>gi|145220984|ref|YP_001131662.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|315442044|ref|YP_004074923.1| uroporphyrinogen-III synthase [Mycobacterium sp. Spyr1]
gi|145213470|gb|ABP42874.1| Uroporphyrinogen III synthase HEM4 [Mycobacterium gilvum PYR-GCK]
gi|315260347|gb|ADT97088.1| uroporphyrinogen-III synthase [Mycobacterium sp. Spyr1]
Length = 380
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/265 (10%), Positives = 60/265 (22%), Gaps = 41/265 (15%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
+ +T ++A +++ G + + L + T
Sbjct: 13 RVAVT-SARRADELAALLRRRGATVTSAAAIEMVPLPDDDELRQRTQSLIDAPPDIVIAT 71
Query: 56 SSESLSTLPANFCRHTP-------------IFAIGEASACLARQKGFTQIFHGKDNSINL 102
+ A + +A+ L + ++S L
Sbjct: 72 TGIGFRGWVAAADGWGMAADLTTALSTARIVSRGPKATGALRAAGLPEEWSPESESSREL 131
Query: 103 AKIIVEQKVLFTPQKPLIY--LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+VE + T ++ F D L + I Y
Sbjct: 132 LHYLVEGGIAGTRIAVQLHGATAEWDPFPEFLDELRAAGAEVVPIRVYRWHPAPRNGDFD 191
Query: 161 KNLL----QNADAILFYARSSVLYFFSLPLPAKIS----------AAFLCLSNNIASAIP 206
+ + + DA+ F + +V + +C+ A +
Sbjct: 192 QLVAGIAEEKFDAVSFTSAPAVASVLLRATEMGLEAEVLSALRNGVHAMCVGPVTARPLV 251
Query: 207 ASYKNVVTVACFPKETSLLKLLPLR 231
V E L L
Sbjct: 252 RLG-----VPTSAPERMRLGALARH 271
>gi|302534749|ref|ZP_07287091.1| uroporphyrinogen III synthase HEM4 [Streptomyces sp. C]
gi|302443644|gb|EFL15460.1| uroporphyrinogen III synthase HEM4 [Streptomyces sp. C]
Length = 385
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/264 (10%), Positives = 68/264 (25%), Gaps = 46/264 (17%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSE 58
+T ++A +++ G + P + + L + A+ T++
Sbjct: 16 VT-AARRADELIALLRRRGAAVIHAPALRIVPLADDGELMAATKELVDNPPDAVVATTAI 74
Query: 59 SLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ A G R G + + + S +LA+++
Sbjct: 75 GFRGWIEAADGWGIGEQLLERLRTTELLARGPKVKGAVRAAGLVEAWSPQ--SESLAEVL 132
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+ + F + L + + + Y +
Sbjct: 133 DRLLAGGVAGRRIALQLHGEPLPGFVEALRDGGAEVVPVPVYRWMPPEDLAPLDRLLDAI 192
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKISAAFL-----------CLSNNIASAIPASYKN 211
+ DA+ F + + S + A L C+ A + A
Sbjct: 193 AVGAVDAVSFTSAPAAASLLSRAAERGLREAVLEALRGTRRGRRCVGPVTALPLQAEGGG 252
Query: 212 VVTVACFPKETS-----LLKLLPL 230
P + L+++L
Sbjct: 253 N-----RPSRSGFGSGPLVQVLCR 271
>gi|307637897|gb|ADN80347.1| Uroporphyrinogen-III synthase [Helicobacter pylori 908]
gi|325996494|gb|ADZ51899.1| Uroporphyrinogen-III synthase [Helicobacter pylori 2018]
gi|325998082|gb|ADZ50290.1| Uroporphyrinogen-III synthase [Helicobacter pylori 2017]
Length = 220
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 60/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + + +
Sbjct: 24 LDLTPFNALIFTSKNAVFSLLKTLKNSPKLKILQNIPAYALSEPTAKTLQDHHFKTAFIG 83
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ ++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 84 EKAHGKEFAQEILPLLEKKSVLYLRAKEIASSLDAILLEHGINFQQAVVYENKLKHLTLS 143
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F S + + N A + +A
Sbjct: 144 EQNALKPQEKSVLIFTAISHAKAFLHYFEFLKSYTAISIGNTTALYLQEQGIQS-YIAQK 202
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 203 PSLEACLELALNLR 216
>gi|317009904|gb|ADU80484.1| uroporphyrinogen-III synthase [Helicobacter pylori India7]
Length = 226
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 57/194 (29%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQK-----GFTQIFHGKDN 98
+ A+ TS ++ +L + + A +
Sbjct: 30 LDPAPFNALIFTSKNAVFSLLETLKDSPKLTILQNIPAYALSEPTAKILQDHHFKTAFIG 89
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
K ++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 KKAHGKEFAKEIIPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F + + + N A + +A
Sbjct: 150 EQNALKPKEKSVLIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEKGIPS-YIAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|210135383|ref|YP_002301822.1| uroporphyrinogen-III synthase [Helicobacter pylori P12]
gi|210133351|gb|ACJ08342.1| uroporphyrinogen III cosynthase [Helicobacter pylori P12]
Length = 226
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 58/194 (29%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQK-----GFTQIFHGKDN 98
+ A+ TS ++ +L + + + A +
Sbjct: 30 LDPTPFNALIFTSRNAVFSLLETLNNNPKLKTLQNIPAYALSEPTAKTLQDHHFKTAFIG 89
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
K ++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 KKAHGKEFAKEIIPLLEKKSVLYLRAKEIASSLDTILLEHGINFQQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F + + + N A + +A
Sbjct: 150 EQNALKPKEKSVLIFTAISHAKAFLHYFDFLENYTAISIGNTTALYLQEKGIPS-YIAQK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|291563543|emb|CBL42359.1| porphobilinogen deaminase [butyrate-producing bacterium SS3/4]
Length = 827
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 64/267 (23%), Gaps = 47/267 (17%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMM--PLSYFIHDR-ESVFLAMQQSYGAIAITSSESLS 61
+T R ++ G V L A Y + TS ++
Sbjct: 556 VTGTEAVRGRIISRLSDEGAKTVRAGESLVVRESMERLDQAFADLSRYRWVIFTSRNAVR 615
Query: 62 TLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSIN-LAKIIVEQKV 111
+G + G T F ++ + LA +V+
Sbjct: 616 IFFDRMREKHVDIRKLGGLKFAVVGRGTGEYLESVGITPDFIPEEYTTKALADGLVKYLK 675
Query: 112 LFTPQ--------------------------KPLIYLGGKPRNFHFEDYLIEHKIPLRVI 145
+ K + + L E I
Sbjct: 676 ENGETSGAKTAATNIAYSISSSENVCPCAEAGKFLIPRAKQGSKVLTETLAEQGYAFDDI 735
Query: 146 DCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS----AAFLCLSNNI 201
Y E T L+ AD I F + S V FF+ S +C+
Sbjct: 736 PIYDI----LVEQTELARLKTADYITFESGSGVRGFFAGREAEAASLFETVRPVCIGKVT 791
Query: 202 ASAIPASYKNVVTVACFPKETSLLKLL 228
A+ + A +L++L
Sbjct: 792 AAVLAEYGVKNALTASDYTADGILEVL 818
Score = 37.1 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+I R + + E + + GY +P+ E LA ++ I S +
Sbjct: 708 KFLIPRAKQGSKVLTETLAEQGYAFDDIPIYDI--LVEQTELARLKTADYITFESGSGVR 765
Query: 62 TLPA 65
A
Sbjct: 766 GFFA 769
>gi|138895375|ref|YP_001125828.1| uroporphyrinogen-III synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196249177|ref|ZP_03147876.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. G11MC16]
gi|134266888|gb|ABO67083.1| Uroporphyrinogen-III synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196211406|gb|EDY06166.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. G11MC16]
Length = 264
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 53/246 (21%), Gaps = 28/246 (11%)
Query: 13 LRTQEKIQKMGYIPVMMPL-----SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANF 67
I+K G V+ P E + + I T+ + L
Sbjct: 15 DEMTTLIEKQGGTAVIRPAQGTVFLKGSELSEEMRAIIMMRPDWIVFTTGIGVEALWKTA 74
Query: 68 CRHTPIFAIGEASACLARQ----------KGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
R K I +I K
Sbjct: 75 EREGIAVEWKRVIENADIAARGYKTVAALKNIGVIPTAVSEDGTTKGLISALNAYDFAGK 134
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNADAILFYA 174
++ + + + + Y + M + DA+ F +
Sbjct: 135 SVVAQLYGDTAPVLKQFFLTRGASYTELFPYRHVAPDHEMLEMLYNEVVGREIDAVCFTS 194
Query: 175 RSSVLYFFSLPLPAKISAAFL----------CLSNNIASAIPASYKNVVTVACFPKETSL 224
V +FFS + L + A+ + V + ++
Sbjct: 195 AIQVRFFFSFAREKQDITPLLEAFCTDVVACAVGKVTKEALEEEGVSRVITPEHERMGAM 254
Query: 225 LKLLPL 230
+ L
Sbjct: 255 IVTLAR 260
>gi|159039781|ref|YP_001539034.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Salinispora arenicola CNS-205]
gi|157918616|gb|ABW00044.1| Uroporphyrinogen III synthase HEM4 [Salinispora arenicola CNS-205]
Length = 362
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/228 (7%), Positives = 47/228 (20%), Gaps = 28/228 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPAN 66
+Q+ G V P + + L + + + +
Sbjct: 19 DELAALLQRRGARVVFAPALRIVPLADDTELRAATRACLERPPDVLMADTGIGMRGWLEA 78
Query: 67 FCRHTP----------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + S + A+++ +
Sbjct: 79 AEGWGLAEPLRAALSGAYVVARGPKARGAIRAAGLHDQWSPASESCAEVVEHLRERGVAG 138
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAILF 172
+ + R L+ + + Y P + + + DA+ F
Sbjct: 139 QVIAMQLHGGRQPECTSALMAAGATVIEVPVYRWAPPTDPAPLHRLIDLVAGRLVDAVTF 198
Query: 173 YARSSVLYFFSLPL-------PAKISAAFL-CLSNNIASAIPASYKNV 212
+ + A C+ A + V
Sbjct: 199 TSAPAAEALLRAAGDRTDRVLDAFRGTVLASCVGTVTAEPLRRRGVPV 246
>gi|325266579|ref|ZP_08133256.1| uroporphyrinogen-III synthase [Kingella denitrificans ATCC 33394]
gi|324982022|gb|EGC17657.1| uroporphyrinogen-III synthase [Kingella denitrificans ATCC 33394]
Length = 245
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 66/222 (29%), Gaps = 11/222 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMM-PL-SYFIHDRESVFLAMQQSYGAIAITSSESL 60
+++ RP + + ++ G+ + P+ A A+ S ++
Sbjct: 5 LLLVRPENRQAEDRRIAERAGWNVLPFAPVRLAADPTLPEQLAACLPDAAAVFWVSPTAV 64
Query: 61 STLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ HT I +A+A + G + + + A + + P
Sbjct: 65 EMAAPHLRTHTGIVVHIAVGQATARALERAGCFPVHAPAQQNDSEAVLTLPVWQQLPPHS 124
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + G+ + + L + Y S + + QN A +
Sbjct: 125 GIVIIRGQSGREYLAEQLRLRGFRVHAAAAYQSIALPLDWPAF--MRQNVQAAWVTSSEM 182
Query: 178 VLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTV 215
F+ A S +L IA + V+V
Sbjct: 183 ARALFTQAPSACTQKLKSLLYLTHHERIARTLQQYGAAKVSV 224
>gi|124484902|ref|YP_001029518.1| Fe-S protein-like protein [Methanocorpusculum labreanum Z]
gi|124362443|gb|ABN06251.1| Uroporphyrinogen-III synthase-like protein [Methanocorpusculum
labreanum Z]
Length = 231
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 59/236 (25%), Gaps = 22/236 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITS 56
M I ITR AL +K + ++ + V A + AI +
Sbjct: 1 MLIAITR-HTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPN 59
Query: 57 SESLSTLPANFCR----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ L I A G +A + G S K +V
Sbjct: 60 AFVAEKLGPCIKPELASKVRIIANGPQTAKVLHNIGLAAEMLPFFYS----KDLVLYLDR 115
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ K + D + CY + L AILF
Sbjct: 116 WIRGKRIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVMD-----LTGVGAILF 170
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + LP + + + A+ + + LK L
Sbjct: 171 TSPMAFK-LAKLPK--MENIIQMAIGEVTANEMMYGGDAPAVIGDG-SIEGTLKAL 222
>gi|297380403|gb|ADI35290.1| uroporphyrinogen-III synthase [Helicobacter pylori v225d]
Length = 226
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLKILQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L++H I + Y S+ +
Sbjct: 90 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASSLDTILLDHGIDFKQAVVYESKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + A
Sbjct: 150 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIQS-YSAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|157879067|ref|XP_001687362.1| hypothetical protein [Leishmania major strain Friedlin]
gi|321438277|emb|CBZ12030.1| hypothetical protein LMJF_03_0680 [Leishmania major strain
Friedlin]
Length = 286
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 59/262 (22%), Gaps = 47/262 (17%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-----LAMQQSYGAIAITSS 57
I+IT P + R + ++ IP+ +P+ I ++ IA S
Sbjct: 6 ILITAPEVYSKRFAQALEARSLIPMAVPVIETIATPDTADMRALLEQDLNGIDYIAFCSR 65
Query: 58 ESLSTLPANFCRHT------------------------------PIFAIGEASACLARQK 87
++ +L A A+
Sbjct: 66 CAVDSLSAALDHRYGGGGESVSERAGSAPAVNEDRRATAVVKVLAKCALAAIGKDADYVF 125
Query: 88 GFTQIFHGKDNSINLAKIIVEQKVLFTPQK---------PLIYLGGKPRNFHFEDYLIEH 138
+I I + + + F D L
Sbjct: 126 ERLRIRTTICPDEPSPAGIAAKLAESGRAEGRTIAVLAPCVEGFTEPDVVPRFVDQLKGM 185
Query: 139 KIPLRVIDCYYSQDIAY---PETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL 195
+ + +D Y ++ ++ + + F + + ++
Sbjct: 186 GMKVVRVDAYMTRPVSEEAVSAAVTALKNGSVRGVAFTSAGEIAVLLRRSPQCLMNIDVA 245
Query: 196 CLSNNIASAIPASYKNVVTVAC 217
C A V VA
Sbjct: 246 CFGPYTAGFAAKHGVKVSCVAK 267
>gi|317178481|dbj|BAJ56269.1| uroporphyrinogen-III synthase [Helicobacter pylori F30]
Length = 220
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 58/194 (29%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 24 LDPTPFNALIFTSKNAVFSLLETLKNSPKLKILQNIPAYALSEPTAKTLQDHHFKVAFIG 83
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ ++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 84 EKAHGKEFAQEIIPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 143
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + A
Sbjct: 144 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIQS-YSAKK 202
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 203 PSLEACLELALSLR 216
>gi|302869915|ref|YP_003838552.1| Uroporphyrinogen III synthase HEM4 [Micromonospora aurantiaca ATCC
27029]
gi|315501377|ref|YP_004080264.1| uroporphyrinogen iii synthase hem4 [Micromonospora sp. L5]
gi|302572774|gb|ADL48976.1| Uroporphyrinogen III synthase HEM4 [Micromonospora aurantiaca ATCC
27029]
gi|315407996|gb|ADU06113.1| Uroporphyrinogen III synthase HEM4 [Micromonospora sp. L5]
Length = 362
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/228 (8%), Positives = 48/228 (21%), Gaps = 28/228 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPAN 66
+Q+ G V+ P + + L + + +
Sbjct: 19 DELAALLQRRGARVVLAPALRIVPLADDTDLREATRACLEHPPDVLMANTGIGMRGWLEA 78
Query: 67 FCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVEQKVLFTPQ 116
+ A + H +S + +++
Sbjct: 79 AEGWGLAEPLRTTLARAYVVSRGPKATGAIRAAGLREHWSPDSESCDEVVEHLVRRGVAG 138
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAILF 172
+ + R D L+ + + Y A P + + + DA+ F
Sbjct: 139 QVVAMQLHGERQPECADALVAAGATVIEVPVYRWAPPADPAPLHRLIDLVAGRLVDAVTF 198
Query: 173 YARSSVLYFFSLPLPAKI--------SAAFLCLSNNIASAIPASYKNV 212
+ + C+ A + V
Sbjct: 199 TSAPAAEALLRAAGDRTETVLEALRGDVLAGCVGTVTAEPLVRRGVPV 246
>gi|269958022|ref|YP_003327811.1| Uroporphyrinogen-III synthase-like protein [Xylanimonas
cellulosilytica DSM 15894]
gi|269306703|gb|ACZ32253.1| Uroporphyrinogen-III synthase-like protein [Xylanimonas
cellulosilytica DSM 15894]
Length = 526
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSSE 58
++ITR +A + ++++G V+ P++ L Y +A+TS
Sbjct: 63 VLITRAPDRAHSLADLLERLGARVVVAPVTTTAPPASPAALDAAVRSLDDYAWVAVTSVN 122
Query: 59 SLSTLPANFCR 69
++ L R
Sbjct: 123 AVDALRDAAAR 133
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 3/107 (2%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYAR 175
+ ++ G D L + + Y + +A P+ + D + A
Sbjct: 361 RRVLLPLGDLARSVLADGLRAAGWDVHAVVAYRTVPLALPDDVVDAAWGGTIDLGVVAAG 420
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
S+ A + + A A A+ VV VA P +
Sbjct: 421 SAARELARQLGEAAP--PVVAIGQPSAEAAVAAGLTVVGVAERPTDD 465
>gi|255326987|ref|ZP_05368063.1| uroporphyrinogen-III synthase [Rothia mucilaginosa ATCC 25296]
gi|255296204|gb|EET75545.1| uroporphyrinogen-III synthase [Rothia mucilaginosa ATCC 25296]
Length = 276
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 66/259 (25%), Gaps = 35/259 (13%)
Query: 3 IVITRPIKKALR----TQEKIQKMGY---IPVMMPL---SYFIHDRESVFLAMQ---QSY 49
+++TR + E+ + G + PL + Y
Sbjct: 14 VLLTRSAAQGAAFARALAEECTQNGLGEPRVLFAPLQQARTVEPGADHAAALEALASGHY 73
Query: 50 GAIAITSSESLSTLPANFCRHTPIFA--------IGEASACLARQKGFTQIFHGKDNSIN 101
++ TS+ ++ + A+ A + +
Sbjct: 74 AWVSFTSANTVRACAELWGAEFARACASGGVRIACVGAATARAVHTQLGLGTDFQPQVQS 133
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
A ++ E K T ++ L G + L R Y
Sbjct: 134 AAGMLAEFKKPATEPAAVLVLEGSNARPTLREGLKNLGWDRRRCVLYDMVPAEQVAPGEL 193
Query: 162 N-------------LLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
+ + DA++ A S + LP + + + + ASA A
Sbjct: 194 SLAAARALVQGSTVDVPAPDALVVTAPSRLHALLDGALPPESVPPVVAIGASTASACRAL 253
Query: 209 YKNVVTVACFPKETSLLKL 227
V A P L +
Sbjct: 254 NLRYVQ-ADSPSPQDLARA 271
>gi|48477322|ref|YP_023028.1| uroporphyrinogen-III synthase [Picrophilus torridus DSM 9790]
gi|48429970|gb|AAT42835.1| uroporphyrinogen-III synthase [Picrophilus torridus DSM 9790]
Length = 222
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 61/213 (28%), Gaps = 16/213 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
IV TRP +K I+ + + +P++ + V I +TS
Sbjct: 8 IVTTRPAEKYNE----IKGSCFDVINIPVTRIVDLEPPVI---DYKPDVIILTSEHGADL 60
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
+ AIG + ++ G + ++S L ++ + K +
Sbjct: 61 FFKYYNLKGIFMAIGRKTGDEIKRHGINPLIPKDESSYGLINLLDKY-----KDKRIAMF 115
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFF 182
N DYLI++ + Y + ++ +
Sbjct: 116 RSMKSNNIIRDYLIKNHFDFKEYFLYDIVPVNSDI-CNYINDDKCMGVVITSSMEAEIIV 174
Query: 183 SLPLPAKISAAFLCLSNNIASAIPASYKNVVTV 215
S+ K + + + NV+
Sbjct: 175 SMCHGIK---NAFAIGRVTEEKLRSMNINVIKT 204
>gi|308064003|gb|ADO05890.1| uroporphyrinogen-III synthase [Helicobacter pylori Sat464]
Length = 226
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLKILQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F + + + N A + A
Sbjct: 150 EQNALKPKEKSVLIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEKGIQS-YSAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|315587114|gb|ADU41495.1| uroporphyrinogen-III synthase [Helicobacter pylori 35A]
Length = 226
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLQILQNIPAYALSEPTARTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + A
Sbjct: 150 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIQS-YSAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|326772619|ref|ZP_08231903.1| uroporphyrinogen-III synthase [Actinomyces viscosus C505]
gi|326637251|gb|EGE38153.1| uroporphyrinogen-III synthase [Actinomyces viscosus C505]
Length = 363
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 34/115 (29%), Gaps = 4/115 (3%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA----YPETTMKNLLQNADAILF 172
+ ++ + D L + + Y + P+ + DA++
Sbjct: 228 RRVLLPASALADPALADGLRRAGWEVEQVAAYTTVTAEAHDLPPDLDGAWAAGDVDAVVL 287
Query: 173 YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
A S+ L P + + A+A V VA P +L+
Sbjct: 288 TAPSTTRAVLELLGPPPHGTGLVAIGATTAAATRKLGLTVAIVAPSPTPEGVLQA 342
>gi|239981934|ref|ZP_04704458.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Streptomyces albus J1074]
Length = 371
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 55/241 (22%), Gaps = 35/241 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP 64
+T ++A + + G V P + + L + E +
Sbjct: 14 VT-AERRAQELGALLGRRGAEVVYAPALRVVPLADDRELREATE--ELVARPPEIVVAST 70
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQIFHG--------------KDNSINLAKIIVEQK 110
A R A G R+ ++ ++ + E +
Sbjct: 71 AVGFRGWVEAAEGWGVGGALREALGGARLLARGPKVTGAVRAAGLREEWSPRSEAMEEVR 130
Query: 111 VLFTPQK----PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ F + L + + Y A + +
Sbjct: 131 ERLLADGVAGLRVAVQLHGEPVPGFAEALRAAGAEVVGVPVYRWLPPADLTPVDRLVDAT 190
Query: 167 AD----AILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYKNV 212
A+ F + +V+ L A +C+ A + +
Sbjct: 191 VRRTLDALTFTSAPAVVSVLRRAEALGLREALVDAVNGDVAVVCVGPVTARPLQEAGVEP 250
Query: 213 V 213
V
Sbjct: 251 V 251
>gi|258652492|ref|YP_003201648.1| uroporphyrinogen III synthase HEM4 [Nakamurella multipartita DSM
44233]
gi|258555717|gb|ACV78659.1| Uroporphyrinogen III synthase HEM4 [Nakamurella multipartita DSM
44233]
Length = 419
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/257 (7%), Positives = 66/257 (25%), Gaps = 32/257 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T +++ +++ G + P + + L + + +T
Sbjct: 64 RIGVT-AHRRSADLIAALERRGAEVLHAPTLRIVPADQDERLIVATAEVIAARPDILLVT 122
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHG----------KDNSINLAKI 105
++ L ++ E + + + +
Sbjct: 123 TAYGLRGWLEAADAAGLGPSLLEVLSEAKILVRGPKARGAVRAGGLRDAGMSDEETTESL 182
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL- 164
I + + + L + + + Y + P+ + L
Sbjct: 183 IDQVLANGADGLTVAIQLHGFVDEEQLVRLRQAGATVITVAPYLWTAPSEPQRVQRLLDA 242
Query: 165 ---QNADAILFYAR----------SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKN 211
++ DA+ F + F + + + A+ + A +
Sbjct: 243 IAGRSLDAVTFTSAPAAEALLAAARERDRFDQVVAAMRADVVPFVVGPVTAAPLHAVGID 302
Query: 212 VVTVACFPKETSLLKLL 228
+ + ++++ L
Sbjct: 303 AIY-PDRYRLGAMVRTL 318
>gi|156936885|ref|YP_001434681.1| uroporphyrinogen III synthase HEM4 [Ignicoccus hospitalis KIN4/I]
gi|156565869|gb|ABU81274.1| Uroporphyrinogen III synthase HEM4 [Ignicoccus hospitalis KIN4/I]
Length = 234
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 57/219 (26%), Gaps = 26/219 (11%)
Query: 25 IPVMMPLSYFIHDRE-SVFLAMQQSYGAIAITSSESLSTLPANFC-------RHTPIFAI 76
+P + + S + A+ TS + + + + AI
Sbjct: 16 EVTNVPALELVDVADASQIKEAIKEGEAVVFTSKTGVRLVFEKLGDEALELLKGKDVVAI 75
Query: 77 GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLI 136
G +A +G + I + +S LAK++ K + + +
Sbjct: 76 GPKTAAELEARGLSPIVPEEYHSGALAKLL----------KRYNKVVALRSDKASKTLKD 125
Query: 137 EHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLP-----AKIS 191
E L + Y + P+ + + ADA+ +
Sbjct: 126 ELGDKLIEVVIYKTLRRPSPK--IVEAAREADAVAVSSAEVARALIESFQKYSSIDELKK 183
Query: 192 AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ A + VA L + +
Sbjct: 184 LKIAVIGPEAAKPLKELGL-NFVVAPEATFEGLEEAVKR 221
>gi|188528011|ref|YP_001910698.1| uroporphyrinogen-III synthase [Helicobacter pylori Shi470]
gi|188144251|gb|ACD48668.1| uroporphyrinogen-III synthase [Helicobacter pylori Shi470]
gi|308062503|gb|ADO04391.1| uroporphyrinogen-III synthase [Helicobacter pylori Cuz20]
Length = 226
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLKILQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + A
Sbjct: 150 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIQS-YSAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|291453788|ref|ZP_06593178.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291356737|gb|EFE83639.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 390
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 55/241 (22%), Gaps = 35/241 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLP 64
+T ++A + + G V P + + L + E +
Sbjct: 33 VT-AERRAQELGALLGRRGAEVVYAPALRVVPLADDRELREATE--ELVARPPEIVVAST 89
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQIFHG--------------KDNSINLAKIIVEQK 110
A R A G R+ ++ ++ + E +
Sbjct: 90 AVGFRGWVEAAEGWGVGGALREALGGARLLARGPKVTGAVRAAGLREEWSPRSEAMEEVR 149
Query: 111 VLFTPQK----PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ F + L + + Y A + +
Sbjct: 150 ERLLADGVAGLRVAVQLHGEPVPGFAEALRAAGAEVVGVPVYRWLPPADLTPVDRLVDAT 209
Query: 167 AD----AILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYKNV 212
A+ F + +V+ L A +C+ A + +
Sbjct: 210 VRRTLDALTFTSAPAVVSVLRRAEALGLREALVDAVNGDVAVVCVGPVTARPLQEAGVEP 269
Query: 213 V 213
V
Sbjct: 270 V 270
>gi|10581744|gb|AAG20438.1| uroporphyrin-III C-methyltransferase [Halobacterium sp. NRC-1]
Length = 207
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 58/201 (28%), Gaps = 15/201 (7%)
Query: 39 ESVFLAMQQSYGAIAITSSESLSTLPANFCRHT--PIFAIGEASACLARQKGFTQIFHGK 96
+ + + +TS + + + AIG A+A R+ G+T +
Sbjct: 5 DPTGAIPRGDGAVVVVTSKTGVELAADSGWTPGGGRLAAIGPATADACREAGWTVDVVPE 64
Query: 97 DNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY-SQDIAY 155
+ + +V + + D L E + Y ++
Sbjct: 65 EYTS---AGLVAALDGDIDGARVEVARSDHGSAVLTDGLAEAGAYVHETVLYALTRPAGA 121
Query: 156 PETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI---------SAAFLCLSNNIASAIP 206
++T + DA LF + +V ++ + I A + A
Sbjct: 122 GDSTEIAAAGDLDAALFTSSLTVEHWLAAARERGIESAAREGLADATVGAIGPPTAETAA 181
Query: 207 ASYKNVVTVACFPKETSLLKL 227
+V V +L +
Sbjct: 182 DHGISVDVVPDDAGFEALARA 202
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 16/60 (26%), Gaps = 1/60 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
++ +++ V + + A A + V V L+ L
Sbjct: 17 VVVVTSKTGVE-LAADSGWTPGGGRLAAIGPATADACREAGWTVDVVPEEYTSAGLVAAL 75
>gi|68483384|ref|XP_714348.1| potential uroporphyrinogen-III synthase Hem4p [Candida albicans
SC5314]
gi|3859663|emb|CAA22001.1| uroporphyrinogen-III synthase [Candida albicans]
gi|46435907|gb|EAK95279.1| potential uroporphyrinogen-III synthase Hem4p [Candida albicans
SC5314]
Length = 271
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 64/236 (27%), Gaps = 31/236 (13%)
Query: 24 YIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPANFCRHTPIFAIG 77
Y P +PL H +S L+ + ITS ++
Sbjct: 27 YKPNFVPLLTHRHKDKSQTLSFLISDEFLNNIPIFIITSQRAVEMFKECIEELNHDIRQR 86
Query: 78 ----------EASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTPQKPLIYLGGK 125
A+ + + GF + G + N LA +I + + + + G
Sbjct: 87 IYQKIGYTVGPATYKILKSVGFKDVRGGDEAGNGSKLADLIKQDTIGRENIPMVFFTGVI 146
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--------NADAILFYARSS 177
++ + + Y + D K ++ + I+F++
Sbjct: 147 RKDIIPRKLIDSGYNNFQEFILYQTGDRLDIIDNFKKVIHGLDKDKDNDDVWIVFFSPQG 206
Query: 178 VLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + + + + +A P +L + +
Sbjct: 207 TKEIVNYLIDRDGNSNQKNWKIASIGPTTRDYLKDFDLSPHVIAPKPDPEALFETI 262
>gi|317177966|dbj|BAJ55755.1| uroporphyrinogen-III synthase [Helicobacter pylori F16]
Length = 220
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 24 LDPTPFNALIFTSKNAVFSLLETLKSSPKLQILQNIPAYALSEPTAKTLQDHHFKVAFIG 83
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 84 EKAHGKEFVQEIIPLLEKKSVLYLRAKEIVSSLDTILLEHGIDFKQAVVYENKLKHLTLS 143
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + A
Sbjct: 144 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIQS-YSAKK 202
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 203 PSLEACLELALSLR 216
>gi|312198317|ref|YP_004018378.1| uroporphyrinogen III synthase HEM4 [Frankia sp. EuI1c]
gi|311229653|gb|ADP82508.1| Uroporphyrinogen III synthase HEM4 [Frankia sp. EuI1c]
Length = 398
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 51/249 (20%), Gaps = 36/249 (14%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITSSESLSTLPAN 66
+++ G V P + + L + T+
Sbjct: 37 KELGAALERRGAKVVYAPAIQIVPLADDSELLQATERCLAAPLDVVVATTGIGFRGWMDA 96
Query: 67 FCRHTPIFAIGEASACLA-----------RQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ EA + G + ++ + +
Sbjct: 97 AETWGLAEKLTEAVDAATVLARGPKARGAIRAGGLRETWSPESESSSEVLDYLMSGDDLS 156
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----NADAIL 171
K + D L + + Y P + L DA+
Sbjct: 157 GKRIAVQLHGEPLRDLVDTLRLAGADVIEVPVYRWVPPDDPAPLYRLLDTVATGGVDAVA 216
Query: 172 FYARSSVLYFFSLPLPA----------KISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
F + + + F + C+ A + VV P
Sbjct: 217 FTSAPAAVSFLQTADQRDCGPAVRAALRGPVLAACVGPVTAGPLVREDIPVV----QPGR 272
Query: 222 TSLLKLLPL 230
S L L
Sbjct: 273 -SRLGALAR 280
>gi|317182473|dbj|BAJ60257.1| uroporphyrinogen-III synthase [Helicobacter pylori F57]
Length = 226
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLQILQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEIIPLLEKKSVLYLRAKEIASSLDTILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + A
Sbjct: 150 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIQS-YSAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PSLEACLELALSLR 222
>gi|326328721|ref|ZP_08195059.1| putative transcriptional regulator [Nocardioidaceae bacterium
Broad-1]
gi|325953464|gb|EGD45466.1| putative transcriptional regulator [Nocardioidaceae bacterium
Broad-1]
Length = 384
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/259 (10%), Positives = 61/259 (23%), Gaps = 33/259 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ-------QSYGAIAI 54
+ +T +KA +++ G V P +R Q
Sbjct: 23 RVGVT-AARKAEEQINLLERRGAQVVWAPALSVDPNRVDAGALRAVTEQIIGQKIDMFLA 81
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAK 104
T+ + + E + S
Sbjct: 82 TTGIGTRAWFDAAEEWGLLDRLLETLGRAEILARGPKSVGALRRRGLRELWAPESEEFDD 141
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ + K ++ L + + Y + + PE + +
Sbjct: 142 VLEHLRGRDLTGKRIVVQEHGQSLSMVAHALTRQGAEVINVVVYRVESASDPEPMFRLVE 201
Query: 165 Q----NADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYK 210
DA+ F + +V F + C+ A+A +
Sbjct: 202 TLADGELDAVTFTSAPAVAAFMQAAGSVGLRDEVVAAFQADVVAACVGPVTAAAF-EMWG 260
Query: 211 NVVTVACFPKETSLLKLLP 229
V + +++K+L
Sbjct: 261 VPTMVPDRSRTAAMVKMLQ 279
>gi|308184969|ref|YP_003929102.1| uroporphyrinogen-III synthase [Helicobacter pylori SJM180]
gi|308060889|gb|ADO02785.1| uroporphyrinogen-III synthase [Helicobacter pylori SJM180]
Length = 226
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 13/197 (6%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFC--------RHTPIFAIGEASACLARQKGFTQIFHG 95
+ A+ TS ++ +L ++ P +A+ E +A + F F G
Sbjct: 30 LDLTPFNALIFTSKNAVFSLLETLKNSPKLKTLQNIPAYALSEPTAKTLQDHHFKTTFIG 89
Query: 96 KDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY 155
K K ++ + +K ++YL K + L+EH I + Y ++
Sbjct: 90 KKAH---GKEFAKEIIPLLEKKSVLYLRAKEIASPLDTILLEHGINFQQAVVYENKLKHL 146
Query: 156 PETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTV 215
+ L +IL + S F + + + N A +
Sbjct: 147 TLSEQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEKGIQS-YS 205
Query: 216 ACFPKETSLLK-LLPLR 231
A P + L+ L LR
Sbjct: 206 AKKPSLEACLELALSLR 222
>gi|256374987|ref|YP_003098647.1| uroporphyrinogen III synthase HEM4 [Actinosynnema mirum DSM 43827]
gi|255919290|gb|ACU34801.1| Uroporphyrinogen III synthase HEM4 [Actinosynnema mirum DSM 43827]
Length = 381
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/255 (11%), Positives = 61/255 (23%), Gaps = 35/255 (13%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITSSE 58
+T ++A +++ G + P + + L + + A+ T+
Sbjct: 19 VT-AARRAEELVALLERKGAAVLHGPAIRIVPLHDDAKLLEATELVLARQVDAVVATTGI 77
Query: 59 SLSTLPANFCRHTPIFA----------IGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + +S + A+++
Sbjct: 78 GFRGWVEAAEGWGLGDRLLTALGDGLLLARGPKARGAVRAAGLVEDWSPSSESNAELLEH 137
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---- 164
L K + F L E + + Y A P + L
Sbjct: 138 LLGLGVAGKRIAVQLHGIPLPEFTGALREAGAEVVEVPVYRWTGPADPGPLERLLEGVLS 197
Query: 165 QNADAILFYARSSVLYFFSLPLP---------AKISAAFLCLSNNIASAIPASYKNVVTV 215
DA+ F + + A +C+ A + A VV
Sbjct: 198 GQVDAMTFTSAPAAASVLETARQMGRYEEVLAALRRVLVVCVGAIAAGPLVAVGVPVV-- 255
Query: 216 ACFPKETSLLKLLPL 230
P + L
Sbjct: 256 --QPGRARM-GALAR 267
>gi|157803659|ref|YP_001492208.1| hypothetical protein A1E_02390 [Rickettsia canadensis str. McKiel]
gi|157784922|gb|ABV73423.1| hypothetical protein A1E_02390 [Rickettsia canadensis str. McKiel]
Length = 226
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 83/238 (34%), Gaps = 26/238 (10%)
Query: 1 MY-IVITRPIKKALRTQEKIQK--MGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR +++ + +++ K + + PL + +V + +Y I ITS
Sbjct: 1 MKSVLLTRSLEENRKIIKEMSKSNLDLHYIHCPLIKYKILDFNV--NILANYSNIIITSK 58
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ + ++ ++ + ++ + N + ++E ++
Sbjct: 59 YAAIIITKHYINQNIWVV--GNTSKKLLENKGLKVTYTAKN----LEDLIEHFPPKLYEQ 112
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE-TTMKNLLQNADAILFYARS 176
+ + + Y + + + +K +N D IL Y+++
Sbjct: 113 TIYLSSNEITKDLP--------NEIARHIIYSVEYLNELPVSIIKEFEKNIDFILCYSQN 164
Query: 177 SVLYFFSLPLP-----AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S L L + + +S +A+ + KNVV ++KLL
Sbjct: 165 SAKTLVKLLLQNNLLQYVQESLVVAISLKVANIVRPFTKNVVYCDDQ-NPNDIIKLLS 221
>gi|289207857|ref|YP_003459923.1| uroporphyrinogen III synthase HEM4 [Thioalkalivibrio sp. K90mix]
gi|288943488|gb|ADC71187.1| Uroporphyrinogen III synthase HEM4 [Thioalkalivibrio sp. K90mix]
Length = 284
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/266 (10%), Positives = 59/266 (22%), Gaps = 42/266 (15%)
Query: 2 YIVITRPIKKALR-TQEKIQKMGYIPVMMPLSYF------IHDRESVFLAMQQSYGAIAI 54
+ + P +AL +++ G PL + + A+ + +
Sbjct: 19 RVAL--PESRALEVFAGLLERRGAEVWRCPLIAIHDSPDRVAIETWLDKAIAAPFDCLIF 76
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLAR----------QKGFTQIFHGKDNSINLAK 104
+ E + L R A K F +
Sbjct: 77 LTGEGFTRLTGFAQRAGCEDDWLAAVRRTPTLVRGPKPGRVMKPFGVRPDAVAVAPTTEG 136
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM---- 160
II + + +E Y A +
Sbjct: 137 IIETLSGQDLAGRRIGLQLYGAEPNRRLLGFLEQAGAEDFPVWPYRYADAAEAGRVTGLI 196
Query: 161 -KNLLQNADAILFYARSSVLYFFSLPLPAKIS---------AAFLCLSNNIASAIPASYK 210
+ + DAI F +++ V + + + +A + A
Sbjct: 197 EAMIAGDVDAIAFTSQAQVRRLLRVARDSGYQDSLLAALGRTVVAAIGPVVADELRAHGV 256
Query: 211 NVVTVAC-----FPKETSLLKLLPLR 231
+ V P L+ L
Sbjct: 257 HPTVVPDSQYFMKP----LVSALARH 278
>gi|254568672|ref|XP_002491446.1| Uroporphyrinogen III synthase [Pichia pastoris GS115]
gi|238031243|emb|CAY69166.1| Uroporphyrinogen III synthase [Pichia pastoris GS115]
gi|328352044|emb|CCA38443.1| uroporphyrinogen-III synthase [Pichia pastoris CBS 7435]
Length = 265
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/240 (14%), Positives = 71/240 (29%), Gaps = 31/240 (12%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAI------AITSSESLSTLPANFC-- 68
E GY +PL IH +S +A ++ + ITS ++ L
Sbjct: 19 ENFVSSGYSTDFVPLLDHIHMEKSEIIAFLKTDYFLHKTLAFIITSQRAVEMLNECMQIL 78
Query: 69 -----------RHTPIFAIGEASAC--LARQKGFTQIFHGKDNSINLAKIIVE---QKVL 112
P++ +G A+ + N LA+II+ +
Sbjct: 79 RRTDPEITQIIYSKPVYTVGPATYRILADAGFVDLRGGDKAGNGSILAQIILNDDIYTGI 138
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE-------TTMKNLLQ 165
K + + G+ R L+ + L Y + ++ +
Sbjct: 139 EDSDKHITFFTGETRRDIIPKCLLSNNFQLYEKIVYKTLPRDDIVTRFKSAVDSIDQSQR 198
Query: 166 NADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLL 225
++ ++F++ + K + + + VA P+ SLL
Sbjct: 199 SSSWVVFFSPQGTEDIVTYLQHTKDQFNIASIGPTTEKYLLSKNLKPKVVAPKPEPISLL 258
>gi|15612210|ref|NP_223863.1| uroporphyrinogen-III synthase [Helicobacter pylori J99]
gi|4155752|gb|AAD06731.1| putative UROPORPHYRINOGEN-III SYNTHASE [Helicobacter pylori J99]
Length = 223
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 6/189 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQK-----GFTQIFHGKDN 98
+ + A+ TS ++ +L + + A +
Sbjct: 30 SDLTPFNALIFTSKNAVFSLLETLNNSPKLKMLQNIPAYALSEPTAKTLQDHHFKTAFIG 89
Query: 99 SINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
K ++ + +K ++YL K + L+EH I L+ Y ++ +
Sbjct: 90 KKAHGKEFAKEILPLLEKKSVLYLRAKEIASSLDTILLEHGINLQQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L ++L + S F S + + N A + A
Sbjct: 150 EQNALKPQEKSVLIFTAISHAKAFLHYFEFLKSYTAISIGNTTAHYLQEQGIQS-YTAQK 208
Query: 219 PKETSLLKL 227
P S L+L
Sbjct: 209 PSLESCLEL 217
>gi|169854857|ref|XP_001834100.1| hypothetical protein CC1G_08731 [Coprinopsis cinerea okayama7#130]
gi|116504800|gb|EAU87695.1| hypothetical protein CC1G_08731 [Coprinopsis cinerea okayama7#130]
Length = 292
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 78/279 (27%), Gaps = 53/279 (18%)
Query: 2 YIVITR---PIKKALRTQEKI--QKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAI 52
+++ R P ++ Q +GY +P+ H + + Y +
Sbjct: 3 NVLLFRDPVPGPSTDPYEDLFHQQNLGYTTKCVPVLETTHANIDELASRLVKGYEKYSGM 62
Query: 53 AITSSESLSTLPANF------------------------CRHTPIFAIGEASACLARQKG 88
ITS S + P + +GE ++
Sbjct: 63 VITSKRSCEAVHEALSNLSSDDNHIINNNRESLSKALAHWSSVPFYVVGEGTSTAIHTVQ 122
Query: 89 FTQIF----------HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEH 138
L IV++ +PL+YL G L +
Sbjct: 123 RAFHHLGFTKIQTKGEASGTGEQLGHFIVKEHGQDAK-EPLLYLTGDKNRDTVPTLLTKG 181
Query: 139 KIPLRVIDCYYSQDIAYPETTMKN------LLQNADAILFYARSSVLYFFSLPL--PAKI 190
I + Y + E +++ I ++A SS + F L PA
Sbjct: 182 NIKFESLRVYETTGRKDFERLLEDAVTSFQDANQPWWITYFAPSSASFVFPLVQTHPALR 241
Query: 191 SAAFLCLSNNIASAI-PASYKNVVTVACFPKETSLLKLL 228
+A + ++ + + VA PK L+ +
Sbjct: 242 NARIAAIGPVTSTHLEKQMGVSPQVVATNPKPEDLVSAI 280
>gi|229821277|ref|YP_002882803.1| Uroporphyrinogen III synthase HEM4 [Beutenbergia cavernae DSM
12333]
gi|229567190|gb|ACQ81041.1| Uroporphyrinogen III synthase HEM4 [Beutenbergia cavernae DSM
12333]
Length = 381
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/242 (8%), Positives = 52/242 (21%), Gaps = 32/242 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY------GAIAITS 56
+++T +++ +++ G P I + L + +T+
Sbjct: 23 VLVT-ADRRSSELAAALERRGAEVRHAPALGMIPHVDDSRLLDATRALLEDAPDVVVVTT 81
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
H + + A + A + E +
Sbjct: 82 GIGFRAWVEAADAHGLADDLVQVLAGARLVARGPKARGAIQAVGLTADWVAESETSAEVA 141
Query: 117 K----------PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET----TMKN 162
+ + L E + + ++ Y PE
Sbjct: 142 DLLLGEGVVGLRIAVQHHGAGADGLDVVLAEARAQVISLEVYRWGPAPDPEAVRVSVHAA 201
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKISA-----------AFLCLSNNIASAIPASYKN 211
DA++F + + + A + A +
Sbjct: 202 ADGEIDAVVFTSAPGAEAWLGAAEAEGVGAEVVARLASGAMVAAAVGPITAKPLERRGVR 261
Query: 212 VV 213
+
Sbjct: 262 PL 263
>gi|282892113|ref|ZP_06300588.1| hypothetical protein pah_c207o045 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498008|gb|EFB40352.1| hypothetical protein pah_c207o045 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 211
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/197 (11%), Positives = 52/197 (26%), Gaps = 19/197 (9%)
Query: 25 IPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITSSESLSTL---------PANFCRH 70
+ P+ + Y + +TS ++ A+
Sbjct: 18 QAIHCPIIKIAPRAFFEPDIIQAFSRFSDYTHLILTSQTAVQLFLEAAIFFQINADVINT 77
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
I A+G+ +A + F+ F + + + + + + +
Sbjct: 78 KKIVAVGKKTAAELAKHRFSADFVPLEETAEGIRDLFANWDRTSLY--VFWPHSALSRPL 135
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI 190
DY ++ I Y + L D I+F + S+V F
Sbjct: 136 LTDYWKQNGIKHTDCVLYDTFTNH---EVTLPDLSTIDEIVFTSPSTVDAFLERYYHIPR 192
Query: 191 SAAFLCLSNNIASAIPA 207
+ A+ +
Sbjct: 193 DKKLTFIGPVTAARLAK 209
>gi|256425453|ref|YP_003126106.1| uroporphyrinogen III synthase HEM4 [Chitinophaga pinensis DSM 2588]
gi|256040361|gb|ACU63905.1| Uroporphyrinogen III synthase HEM4 [Chitinophaga pinensis DSM 2588]
Length = 248
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/243 (13%), Positives = 68/243 (27%), Gaps = 30/243 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGA----IAITSS 57
I+ TR + + + + L Q + TS
Sbjct: 8 RILSTRAVD--PELVSSAAEQSVDIIPQAFIRTRPRVDDRLLQQVQQLLKEKVTVVFTSV 65
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQI--------------FHGKDNSINLA 103
+++ + + R P A + H + A
Sbjct: 66 NAVNAIQNLYFRILPADA---VTEQANMPGWDVYCLEGATKEALSRTAIPHNITGTAANA 122
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ + V + PL++ G R D L + I L + Y + +
Sbjct: 123 AMLAQTIVRNEEKGPLVFFCGDRRRDELPDILRQRNIGLNEVIVYETTETP------AVT 176
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
D I F + S+V FFS + A+A+ N + ++ +
Sbjct: 177 GATYDGIFFLSPSAVQSFFS-VNHLAQHTVCFSIGPTTAAALEQHTNNKIIISTGQRMAD 235
Query: 224 LLK 226
+++
Sbjct: 236 MVQ 238
>gi|238883887|gb|EEQ47525.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 271
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 64/236 (27%), Gaps = 31/236 (13%)
Query: 24 YIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPANFCRHTPIFAIG 77
Y P +PL H +S L+ + ITS ++
Sbjct: 27 YKPNFVPLLTHCHKDKSQTLSFLISDEFLNNIPIFIITSQRAVEMFKECIEELNHDIRQR 86
Query: 78 ----------EASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTPQKPLIYLGGK 125
A+ + + GF + G + N LA +I + + + + G
Sbjct: 87 IYQKIGYTVGPATYKILKSVGFKDVRGGDEAGNGSKLADLIKQDTIGRENIPMVFFTGVI 146
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--------NADAILFYARSS 177
++ + + Y + D K ++ + I+F++
Sbjct: 147 RKDIIPRKLIDSGYNNFQEFILYQTGDRLDIIDNFKKVIHSLDKGKDNDDVWIVFFSPQG 206
Query: 178 VLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + + + + +A P +L + +
Sbjct: 207 TKEIVNYLIDRDGDSNQKNWKIASIGPTTRDYLKDFDLSPHVIAPKPDPEALFETI 262
>gi|86748701|ref|YP_485197.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
HaA2]
gi|86571729|gb|ABD06286.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
HaA2]
Length = 281
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/268 (9%), Positives = 61/268 (22%), Gaps = 41/268 (15%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIA 53
I+I TR + + G + P+ + + + + +
Sbjct: 9 RILILETREEAQ---FSRLLADQGAEVLQCPMVAIVDAPDPAPVAAWIDRLIAAPFDDLV 65
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+T+ E L L +A R + A + E
Sbjct: 66 LTTGEGLRRLTRLARSLDRERDFVDAIGKTRRFARGPKPGRALREIGLDADVTTETPTSE 125
Query: 114 TPQKPL------IYLGGKPRNFHFED-----YLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
L + G + + + + Y A E +
Sbjct: 126 GIAATLAKSDLRDHRVGLQLYPDKDHAALIGAVEAQGAVVDAVLPYAYDARAAEENVVTA 185
Query: 163 L----LQNADAILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASY 209
+ DAI + + + F + + + ++ +
Sbjct: 186 IEEMAQGRVDAIALTSSNQLRRLFDVATARGYEARLREGLDATPIASVGPVVSDELRHYG 245
Query: 210 KNVVTVAC------FPKETSLLKLLPLR 231
P ++++ L R
Sbjct: 246 LTPAITPPEGAFFMKPLISAMITSLNRR 273
>gi|68483297|ref|XP_714390.1| potential uroporphyrinogen-III synthase Hem4p [Candida albicans
SC5314]
gi|46435951|gb|EAK95322.1| potential uroporphyrinogen-III synthase Hem4p [Candida albicans
SC5314]
Length = 271
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 64/236 (27%), Gaps = 31/236 (13%)
Query: 24 YIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPANFCRHTPIFAIG 77
Y P +PL H +S L+ + ITS ++
Sbjct: 27 YKPNFVPLLTHCHKDKSQTLSFLISDEFLNNIPIFIITSQRAVEMFKECIEELNHDIRQR 86
Query: 78 ----------EASACLARQKGFTQIFHGKD--NSINLAKIIVEQKVLFTPQKPLIYLGGK 125
A+ + + GF + G + N LA +I + + + + G
Sbjct: 87 IYQKIGYTVGPATYKILKSVGFKDVRGGDEAGNGSKLADLIKQDTIGRENIPMVFFTGVI 146
Query: 126 PRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--------NADAILFYARSS 177
++ + + Y + D K ++ + I+F++
Sbjct: 147 RKDIIPRKLIDSGYNNFQEFILYQTGDRLDIIDNFKKVIHGLDKDKDNDDVWIVFFSPQG 206
Query: 178 VLYFFSLP-----LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + + + + + +A P +L + +
Sbjct: 207 TKEIVNYLIDRDGNSNQKNWKIASIGPTTRDYLKDFDLSPHVIAPKPDPEALFETI 262
>gi|283770734|ref|ZP_06343626.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
H19]
gi|283460881|gb|EFC07971.1| uroporphyrinogen-III synthase [Staphylococcus aureus subsp. aureus
H19]
Length = 184
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 54/184 (29%), Gaps = 8/184 (4%)
Query: 51 AIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
+S ++ S + N + +
Sbjct: 6 GFIFSSKNAVKFFYKYLKGINVDNIAVIGSKTAQYCESLGIQVDFMPNDFSQEGFLK--- 62
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA- 169
+ ++ + L + + ID Y S +K ++++
Sbjct: 63 SFNQTNQKILLPSSELARPLLSAALSKDN-EVVKIDLYTSVPNKQNIQDVKEMIEHQQID 121
Query: 170 -ILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ F + S+V Y+F+ K + + + A I + + VT+A SL++ +
Sbjct: 122 ALTFSSSSAVRYYFNEGFVPKFKS-YFAIGEQTARTIKSY-QQPVTIAEIQTLESLIEKI 179
Query: 229 PLRR 232
R
Sbjct: 180 LESR 183
Score = 40.2 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ +F ++++V +F+ + + + A + V + +
Sbjct: 1 MNAMTGFIFSSKNAVKFFYKYLKGINVD-NIAVIGSKTAQYCESLGIQVDFMPNDFSQEG 59
Query: 224 LLK 226
LK
Sbjct: 60 FLK 62
>gi|162454731|ref|YP_001617098.1| putative transcriptional regulator [Sorangium cellulosum 'So ce
56']
gi|161165313|emb|CAN96618.1| putative transcriptional regulator [Sorangium cellulosum 'So ce
56']
Length = 387
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/272 (11%), Positives = 61/272 (22%), Gaps = 52/272 (19%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ------SYGAIAITSSESLSTLP 64
+A IQ+ G +P+ P + + + + + + L
Sbjct: 96 RASEMASLIQRHGGVPITAPTLREVPIERNERALDFARRLAGAEFDLVILMTGVGTRALV 155
Query: 65 ANFCR-------------------------------HTPIFAIGEASACLARQKGFTQIF 93
A I G A R+ G T+
Sbjct: 156 AEAAPALEPNQGSGGASEGDGGADAQGVSLLAAALSSVQIVVRGPKPAAALRELGLTRFI 215
Query: 94 HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
++ + + + K + + L + + Y +
Sbjct: 216 TVREPNTWREIVEAVSALGDLRGKRVAVQEHGAPSHELYASLSAAGAQVTPVPVY-RWAL 274
Query: 154 AYPETTMKNLLQNAD-----AILFYARSSVLY---------FFSLPLPAKISAAFLCLSN 199
++ L+ LF +R+ V + A +
Sbjct: 275 PEDTAPLRQALRLMADGGAAITLFTSRAQVEHALLVAAEEGLVERLRAALARGVVASIGP 334
Query: 200 NIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
A+ A PK L+K R
Sbjct: 335 VCTEALRAEGIEPDFEPEHPKMGHLVKAAAAR 366
>gi|317011423|gb|ADU85170.1| uroporphyrinogen-III synthase [Helicobacter pylori SouthAfrica7]
Length = 224
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN-- 101
+ A+ TS ++ +L + + + + + +
Sbjct: 30 LDLTPFNALIFTSKNAVFSLLETLKHSPKLKMLQNIPSYALSEPTAKILQDHYFKTAFIG 89
Query: 102 ---LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
K ++ + +K +YL K + L+EH I L+ Y ++ +
Sbjct: 90 KKAHGKEFAKEIIPLLEEKSALYLRAKDIVSSLDAILLEHGINLKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N AS + +A
Sbjct: 150 EQNALKPKEKSILIFTAISHAKAFLHYFEFLKNYTAISIGNTTASYLKERGIQS-YIAKK 208
Query: 219 PKETSLLK-LLPLR 231
P + L L L+
Sbjct: 209 PSLEACLNLALSLK 222
>gi|297170422|gb|ADI21454.1| hypothetical protein [uncultured gamma proteobacterium
HF0070_10G19]
Length = 233
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 77/241 (31%), Gaps = 24/241 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI-----HDRESVFLAMQQSYGAIAITSS 57
I+ TRP K+A R KI++ +P++ E L + + + TS
Sbjct: 2 IINTRPEKQARRLGYKIEQAELNYSNIPITDITQRNFLSKDEISNLKKIEEFEVLIFTSI 61
Query: 58 ESLST-------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
++ + A+G +++ G T + +S L K+
Sbjct: 62 AAVKYGIKIVQDFISIEDAKFQFMAVGPSTSKALLSHGITAMLPDTYDSDGLMKLCKSMN 121
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI 170
+ + E L ++ + + + + +++ L I
Sbjct: 122 FKNI---------LVLSSSNSEMQLSKYSEKVHYVFSHDVIALENQIGALRSSLNQCTKI 172
Query: 171 LFYARSSVLYFFSLPLPAKISAAFLCL--SNNIASAIPASYKNVVTVACFPKETSLLKLL 228
L Y++ S+ + C+ S + +P S K VA + + + +
Sbjct: 173 LIYSKFSLDIILKNTEIGSMQ-NLQCILPSYRLVKLLPESLKKRAIVARSALDEDMFQAI 231
Query: 229 P 229
Sbjct: 232 Q 232
>gi|332971038|gb|EGK10009.1| uroporphyrinogen-III synthase [Kingella kingae ATCC 23330]
Length = 247
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 64/227 (28%), Gaps = 13/227 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES--VFLAMQQSYGAIAITSSESL 60
+++ RP ++ Q G+ V ++ + A+ S ++
Sbjct: 4 LLLVRPTQRQAADITLCQHAGWQAVPFAPIELCPNQAACTALPQQITQAQAMFWVSPSAV 63
Query: 61 STLPAN-----FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
R A+G+A+A + G + + + + A + + P
Sbjct: 64 EIAQHFLQGDLIWRKQTHIAVGQATAHALQSAGCLHVHASHNGNDSEAALQLPIWQTLPP 123
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ ++ + G+ H + L ++ Y Q A +
Sbjct: 124 RATILIVRGQNGREHLAEQLRLRDFVVQYAPIYQRIVQTLD--WTLLDTQKVQAAWVTSS 181
Query: 176 SSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACF 218
FS P+ S + IA + + + V
Sbjct: 182 QMAQPLFSQAPPSYTQMLQSLLYFTHHTRIADTLAQNGATQIRVCSH 228
>gi|332652724|ref|ZP_08418469.1| porphyrin biosynthesis protein HemD [Ruminococcaceae bacterium D16]
gi|332517870|gb|EGJ47473.1| porphyrin biosynthesis protein HemD [Ruminococcaceae bacterium D16]
Length = 495
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 50/202 (24%), Gaps = 8/202 (3%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY--GAIAITSSESLSTLPANFCRH 70
R + + +G S S L + +TS +
Sbjct: 264 QRLNDALSPLGARSFAALTSQLEELPCSFDLNTLCDGAPRWVVLTSQNGVDCFFHRLKEQ 323
Query: 71 T------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGG 124
I ++ + + + V PQ +YL
Sbjct: 324 NIDLRKLHACRFAAIGKATEASLASHGIHADLCPPVHTTQALAQALVDAVPQGEPVYLFR 383
Query: 125 KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSL 184
+ I Y Q T + + +Q +D ++F + S V +F
Sbjct: 384 SALGSPELYRRLAEHTHTEDIPLYTLQAPELDCTVLCSQVQQSDYLVFSSASGVDFFLKT 443
Query: 185 PLPAKISAAFLCLSNNIASAIP 206
+C+ A A+
Sbjct: 444 FGSIPEGPVCVCIGPVTAQALA 465
Score = 42.1 bits (97), Expect = 0.055, Method: Composition-based stats.
Identities = 7/84 (8%), Positives = 23/84 (27%), Gaps = 6/84 (7%)
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASA 204
+++ ++ +++ V FF I F + ++
Sbjct: 286 EELPCSFDLNTLCDGAPRWVVLTSQNGVDCFFHRLKEQNIDLRKLHACRFAAIGKATEAS 345
Query: 205 IPASYKNVVTVACFPKETSLLKLL 228
+ + + +L + L
Sbjct: 346 LASHGIHADLCPPVHTTQALAQAL 369
>gi|328882767|emb|CCA56006.1| putative transcriptional regulator [Streptomyces venezuelae ATCC
10712]
Length = 408
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/238 (10%), Positives = 63/238 (26%), Gaps = 35/238 (14%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSE 58
+T ++A +++ G V P + + L + + + T++
Sbjct: 46 VT-AARRADELIALLRRRGAAVVHGPALRIVPLADDTELLAATKELIAHAPDVVVATTAI 104
Query: 59 SLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ A G R G T+ + S ++A+++
Sbjct: 105 GFRGWVEAAEGWGYGEDLLAVLRDVELLARGPKVKGAVRAAGLTESWSP--GSESMAEVL 162
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLL 164
+ + F + L + + Y P + + +
Sbjct: 163 DRLLAEGVDGRRIALQLHGEPLPGFVEALTAGGAEVVGVPVYRWMPPEDTGPLDRLLDAI 222
Query: 165 QNA--DAILFYARSSVLYFFSLPLPAKISAAF----------LCLSNNIASAIPASYK 210
+ DA+ F + + F+ + +C+ A + A
Sbjct: 223 LSGGLDAVTFTSAPAAASLFARAAEKGVRDRLVAALRHDVLSVCVGPVTALPLQAEGI 280
>gi|302521494|ref|ZP_07273836.1| uroporphyrinogen-III synthase [Streptomyces sp. SPB78]
gi|302430389|gb|EFL02205.1| uroporphyrinogen-III synthase [Streptomyces sp. SPB78]
Length = 379
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/252 (12%), Positives = 64/252 (25%), Gaps = 35/252 (13%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSESLSTLP 64
+A +++ G + P + + L + + T++ L
Sbjct: 30 RAEDLLALLRRRGARVLHGPAMRTVPLEDDAELRAVTEELLAHPPHLVIGTTAVGLRGWF 89
Query: 65 ANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
A + A G R G T+ + S ++A+++ +
Sbjct: 90 AAAEGWGLGAELSDVLRGARLLARGPKVKGALRGAGLTEEWSPA--SESMAEVLDHLRTF 147
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL----LQNAD 168
+ F L E + + Y + D
Sbjct: 148 ELRGARVAVQLHGDPLHAFRTALAEAGADILAVPVYRWLPPEDTAPLDRLTDAVLAGTID 207
Query: 169 AILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
A+ F + + L L + S C+ A+ + A V
Sbjct: 208 ALPFTSAPAALALLARAETRGLRDQLLSALRESVLVACVGPVTAAPLQALGIPTVA-PER 266
Query: 219 PKETSLLKLLPL 230
+ L+ LL
Sbjct: 267 FRLAPLVDLLCR 278
>gi|283777967|ref|YP_003368722.1| uroporphyrinogen decarboxylase [Pirellula staleyi DSM 6068]
gi|283436420|gb|ADB14862.1| uroporphyrinogen decarboxylase [Pirellula staleyi DSM 6068]
Length = 641
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/238 (9%), Positives = 50/238 (21%), Gaps = 31/238 (13%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS------YGAIAITSSESLSTLPAN 66
I+K+G P + P + + A+ + L A
Sbjct: 22 AEMARLIEKLGGQPFVSPSMREVPIATNPAAVEFAQKLITGGIDAMIFLTGVGFRHLLAQ 81
Query: 67 FCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+H G R+ G T + + + +
Sbjct: 82 VEKHVDRERFLHALSDITTICRGPKPVAAMREVGLTPTVKVPEPNTWRDLLATIDAQVPI 141
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY---PETTMKNLLQ-NADAI 170
+ N L + + Y E ++ + D +
Sbjct: 142 ANLNVGLQEYGITNHSLVAGLEARGAQVLQVRVYQWDFPEDTTELEANIRAIAALERDVV 201
Query: 171 LFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+F + V+ + A + + + V P
Sbjct: 202 MFTSAHQVVNMLRMAEQLGLLQDVRDALRQMVVASVGPTTSEMLREQDLPVDIEPEHP 259
>gi|27381067|ref|NP_772596.1| hypothetical protein blr5956 [Bradyrhizobium japonicum USDA 110]
gi|27354233|dbj|BAC51221.1| blr5956 [Bradyrhizobium japonicum USDA 110]
Length = 279
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/269 (10%), Positives = 61/269 (22%), Gaps = 41/269 (15%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYF------IHDRESVFLAMQQSYGAIA 53
I+I TR + + + + G V P+ + A+ + + +
Sbjct: 9 RILILETREEAQ---FSKLLAEQGADVVQCPMFTIHDAPDPAPVEAWIRRAIDRPFDDLV 65
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK--------- 104
+ + E L + A+ A A + + A+
Sbjct: 66 LMTGEGLRRIMKLARTRGLDQALVAALAKSRKFTRGPKPGKALREISLEAQQTTEKPTTE 125
Query: 105 -IIVEQKVLFTPQKPLIYL-GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
+I L + L + L + + Y A +
Sbjct: 126 GVIEMLGKLDLKGRRLGLQLYPDKDHSTLTGALSAQGAEVDTVLPYVYDSKAADANIVAA 185
Query: 163 LLQ----NADAILFYARSSVLYFFSLPLPAK---------ISAAFLCLSNNIASAIPASY 209
+ D+I V + ++ + A
Sbjct: 186 IDDMAEGRIDSIALTNLGQVRRLIEAAKAHGSEAKLRAGLERTLIASVGPAVSGELAAHG 245
Query: 210 KNVVTVACF------PKETSLLKLLPLRR 232
P +++ L +R
Sbjct: 246 LRTDIAPAEDAYFMRPLISAMAAALAEKR 274
>gi|332975660|gb|EGK12549.1| uroporphyrinogen-III synthase family protein [Psychrobacter sp.
1501(2011)]
Length = 266
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 65/207 (31%), Gaps = 14/207 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR--------ESVFLAMQQSYGAI 52
M + TRP +A +QK G + MPL + F + Y A+
Sbjct: 1 MIFINTRPTSRAQPLSLAMQKRGMTVLEMPLLELAPVDISERELQYQKDFYQQPERYQAL 60
Query: 53 AITSSESLS----TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ S + P F + A+G A+A + R G+ + ++ + K+
Sbjct: 61 VVVSPTAARMGLAACPQGFMPKCAVIAVGHATAEVLRAAGWQVQCPDEYSNEGMIKMPSL 120
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ ++ G+ ++L E+ + + I Y + L Q
Sbjct: 121 NTLSTGHH--ILVWRGRGGRRVLVNFLQENGVTVDAIAWYQRRCPIDALDKFTKLQQQLV 178
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFL 195
+ + A + L
Sbjct: 179 TLSAQSEPIAPITLISSGEAFTNWRML 205
Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 10/115 (8%), Positives = 31/115 (26%), Gaps = 8/115 (6%)
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ------NADAILF 172
I R + + + + + + E ++ A++
Sbjct: 3 FINTRPTSRAQPLSLAMQKRGMTVLEMPLLELAPVDISERELQYQKDFYQQPERYQALVV 62
Query: 173 YARSSVLY-FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ ++ + P A + + + A + A+ V ++K
Sbjct: 63 VSPTAARMGLAACPQGFMPKCAVIAVGHATAEVLRAAGWQ-VQCPDEYSNEGMIK 116
>gi|332666631|ref|YP_004449419.1| Uroporphyrinogen III synthase HEM4 [Haliscomenobacter hydrossis DSM
1100]
gi|332335445|gb|AEE52546.1| Uroporphyrinogen III synthase HEM4 [Haliscomenobacter hydrossis DSM
1100]
Length = 225
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 63/233 (27%), Gaps = 23/233 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I I+R + + + L F +S ++
Sbjct: 1 MTIFISRQLSPDSPFYHLLPADKVKIIGESLVAFEVLE----FGTLPEVDWCFFSSRNAV 56
Query: 61 STLPA-------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
N + +G+ +A +Q+G F G + + + +
Sbjct: 57 HFFFQGLKAAGLNLPSAVKLAVLGDGTAKALKQQGHVADFAGNGDPQTVGE----AFGIV 112
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ +++ + L + + Y + +L AD ++F
Sbjct: 113 AAGQSVLFPRAAQSRESIQKILADAVTIFDL-VVYNNVPRKDF------VLPAADVLVFT 165
Query: 174 ARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + +FS + + A+ V A P E L +
Sbjct: 166 SPLNAQAYFSCYPQQDGQTT-VAIGQTTLQALTELGIKNVHTAATPTEEVLAE 217
>gi|159898856|ref|YP_001545103.1| uroporphyrinogen III synthase HEM4 [Herpetosiphon aurantiacus ATCC
23779]
gi|159891895|gb|ABX04975.1| Uroporphyrinogen III synthase HEM4 [Herpetosiphon aurantiacus ATCC
23779]
Length = 271
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/248 (11%), Positives = 59/248 (23%), Gaps = 31/248 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAIT 55
I I ++A + + G P+ P + + + + +
Sbjct: 8 RIAIL-EARRASELANLLSRHGANPIHAPALREVSVDAAPVAQAVLQELEAGQIDLLILL 66
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI-----------NLAK 104
+ L A+ A + +
Sbjct: 67 TGVGTQQLIDAAASVGLEQAMLTGLAKTTLVCRGPKPTAVLRRYELRPSISAASPYTIND 126
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM---- 160
+I + ++ + L R+ DY E L Y Q A +
Sbjct: 127 LINSLDQVELAERGVGLLHYGERDRKLADYCRERGAVLHEHSVYEWQLPADISPLLALIE 186
Query: 161 KNLLQNADAILFYARSSVLYFFSLPLP---------AKISAAFLCLSNNIASAIPASYKN 211
+ + D F ++ V + + A A + + A A+
Sbjct: 187 QAIAGQVDIFTFTSQIQVRHLLHVAEQQGQAQALIAAMQQALVAAVGPSCAQALINLGIQ 246
Query: 212 VVTVACFP 219
V + P
Sbjct: 247 QVIMPEQP 254
>gi|118474698|ref|YP_892418.1| uroporphyrinogen-III synthase [Campylobacter fetus subsp. fetus
82-40]
gi|261884874|ref|ZP_06008913.1| uroporphyrinogen-III synthase [Campylobacter fetus subsp.
venerealis str. Azul-94]
gi|118413924|gb|ABK82344.1| uroporphyrinogen-III synthase [Campylobacter fetus subsp. fetus
82-40]
Length = 211
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 53/174 (30%), Gaps = 6/174 (3%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
F + A TS ++ L N + + +++ K F
Sbjct: 18 LKVCEVVFYKFNLNLNDFDAAVFTSKNGVNALKFNNIKCENLDIFAISNSTAQACKEFGF 77
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ + + + E K ++Y+ K +L + + + + Y ++
Sbjct: 78 KRIFEGFNAHGNEFAKEIYPCLRG-KKVLYISAKDTVSGLSSFLQSNGVDINTLIAYENR 136
Query: 152 DIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAI 205
+ ++ I+F + +V F S S + + A A+
Sbjct: 137 LLKLN----LKKPEDGSIIIFTSPKNVEGFLSNF-SWNDSYKAIAIGKTTAKAL 185
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 160 MKNLLQNADAILFYARSSVLYF-FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTV 215
L + DA +F +++ V F+ + +SN+ A A +
Sbjct: 28 FNLNLNDFDAAVFTSKNGVNALKFNNIKCENLD--IFAISNSTAQACKEFGFKRIFE 82
>gi|304407798|ref|ZP_07389449.1| Uroporphyrinogen III synthase HEM4 [Paenibacillus curdlanolyticus
YK9]
gi|304343281|gb|EFM09124.1| Uroporphyrinogen III synthase HEM4 [Paenibacillus curdlanolyticus
YK9]
Length = 310
Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 61/257 (23%), Gaps = 29/257 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ-----SYGAIAITS 56
I IT P KA I K G V+ P + +S F Q + +T+
Sbjct: 8 KIAITGPR-KAEDMARMIGKFGGEAVVRPAQGTVFLDDSQFAEQLQSLIEQPVDWLVLTT 66
Query: 57 SESLSTLPANFCRHTPIFAIGEA----------SACLARQKGFTQIFHGKDNSINLAKII 106
L + + + E + + +D A ++
Sbjct: 67 GVGTEALLSTAEKLGQLDRFIETLRGVKLAARGYKTVNVLRRLGLTPLVRDEDGTTAGLL 126
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---L 163
+ + + L I Y + +
Sbjct: 127 RLMEPHDLSGQRVGLQLYGDPAPRLNAVLQSWGAECEEILPYRHIPPEGDVVSQLLGEIV 186
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKIS----------AAFLCLSNNIASAIPASYKNVV 213
DA+ F + V Y A + + + A A+ V
Sbjct: 187 AGAVDAVAFTSTVQVRYVMEQATTAGMRQQVLDVFAGPVLAVAVGKVTAEALYEEGVARV 246
Query: 214 TVACFPKETSLLKLLPL 230
+ S++ +
Sbjct: 247 LFPEEERMGSMVVAMSK 263
>gi|54026532|ref|YP_120774.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Nocardia farcinica IFM 10152]
gi|54018040|dbj|BAD59410.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 412
Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 55/262 (20%), Gaps = 41/262 (15%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITSSE 58
IT ++A + + G V P I + L + T+
Sbjct: 17 IT-AARRAEEFATLLTRRGATIVSAPAIRIIPLADDTELERVTRTLVAEPPQIAVATTGI 75
Query: 59 SLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSI--NLAK 104
T + A G + R + + S L
Sbjct: 76 GFRGWMEAAEGWGLAEYLRGTLAGTRLLARGPKAKGAIRAAELREEWSPASESSAEVLDH 135
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRN-FHFEDYLIEHKIPLRVIDCYYSQDI----AYPETT 159
++ E L + F + L + + Y +
Sbjct: 136 LLAEGVEGVRIAVQLHGATTEWEPVPDFCEVLRCAGADVVPVPVYRWIPPADQGPMDQLI 195
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLP--------AKISAAF--LCLSNNIASAIPASY 209
+ + D + F + +V + C+ A+ +
Sbjct: 196 EAIVTASLDCVTFTSAPAVASMLMRAKETGLLEGVLHALRTRVLPACVGPITAAPLEELG 255
Query: 210 KNVVTVACFPKETSLLKLLPLR 231
P L L
Sbjct: 256 VP----TSMPGRARL-GALARH 272
>gi|221641000|ref|YP_002527262.1| Uroporphyrinogen III synthase HEM4 [Rhodobacter sphaeroides KD131]
gi|221161781|gb|ACM02761.1| Uroporphyrinogen III synthase HEM4 [Rhodobacter sphaeroides KD131]
Length = 236
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 59/233 (25%), Gaps = 18/233 (7%)
Query: 4 VITRPIKKALRTQEKIQKMGYIP--VMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL- 60
++TRP + R + + V PL ++ L A+ TS +
Sbjct: 2 LLTRPEAQGARFAAALAEALGPVRLVTSPLMVPAFLVPAIPLRP----DALIFTSETGVE 57
Query: 61 ---STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ +G +A ++ A+ ++ +
Sbjct: 58 GYRRLAAPELSDVRRAWCVGNRTARA-----AEAAGLAAQSAEGDAERLIAAILAADEPG 112
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE-TTMKNLLQNADAILFYARS 176
PL++L G L + Y + ++
Sbjct: 113 PLLHLRGAESRGEVAPRLAAAGLTAAEAVVYDQRPQPLSSKARALLTDGAPVIAPLFSPR 172
Query: 177 SVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ +S +A A A + VA P +LL+
Sbjct: 173 TARLLAQELARIGGTGPLWVAAMSPAVAEATAALPVARLEVAARPDAEALLQA 225
>gi|254386630|ref|ZP_05001927.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194345472|gb|EDX26438.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 377
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/243 (8%), Positives = 51/243 (20%), Gaps = 37/243 (15%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSE 58
+T ++A +++ G + P + + L A+ T++
Sbjct: 16 VT-AARRADDLIALLRRRGAQVLHAPALRIVPLADDTELLAATKELIDSPPCAVVATTAI 74
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF----------HGKDNSINLAKIIVE 108
+ ++ S +L +++
Sbjct: 75 GFRGWIEAADGWGIGEELLGRLRKAELLVRGPKVKGAVRAAGLVEDWSPQSESLGEVLDR 134
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ + F + L E + V+ Y + L A
Sbjct: 135 LLCAGVAGRRIALQLHGEPLPGFVEALREGGAEVVVVPVYRWMPPEDLGPLDRLLDAVAA 194
Query: 169 AILFYARSSV-----------------LYFFSLPLPAKISAAFLCLSNNIASAIPASYKN 211
+ + + +S C+ A +
Sbjct: 195 GAVDAVSFTSAPAAASLLARAEARGVREAVLASLRGDVLS---ACVGPVTALPLQGHGIA 251
Query: 212 VVT 214
V
Sbjct: 252 TVH 254
>gi|303244840|ref|ZP_07331168.1| uroporphyrinogen III synthase HEM4 [Methanothermococcus
okinawensis IH1]
gi|302484790|gb|EFL47726.1| uroporphyrinogen III synthase HEM4 [Methanothermococcus
okinawensis IH1]
Length = 87
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 14/80 (17%)
Query: 1 MYIVITRPIKKALRTQEKIQK-----------MGYIPVMMPLSYFIHDRESVFLAMQQSY 49
M +VITRP ++ + +++ + P+++P + SV L Y
Sbjct: 1 MKVVITRPPEQGIEFANLLKENTNNNSNRNSNNDFEPILIPTLKLVFKDVSVDL---DKY 57
Query: 50 GAIAITSSESLSTLPANFCR 69
+ TS + L N +
Sbjct: 58 DWVVFTSPRGVLGLFNNLDK 77
>gi|283954643|ref|ZP_06372161.1| uroporphyrinogen-III synthetase [Campylobacter jejuni subsp. jejuni
414]
gi|283793835|gb|EFC32586.1| uroporphyrinogen-III synthetase [Campylobacter jejuni subsp. jejuni
414]
Length = 209
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 47/184 (25%), Gaps = 10/184 (5%)
Query: 45 MQQSYGAIAITSSESLSTLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
Y A+ TS +L L N + + + + +
Sbjct: 30 DLSGYDALICTSKNALKALQNANIALNFKLNLYVVGQSTAQYARNLGFKKIKIPSKAYGR 89
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+ +E K +YL K L + L I Y + +
Sbjct: 90 DLFLE-FKEELKIKKCLYLRAKNIVSTLNLDLKNAGVDLDEIIVYENVFKKSDKK----- 143
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
L + +F + SV F + + + + A + +
Sbjct: 144 LTHPAIFIFTSPLSVENFLKFYSLKEQD-KVVVIGQSTAK--KFLNFKNLFICENQNLQE 200
Query: 224 LLKL 227
+KL
Sbjct: 201 CVKL 204
>gi|281206194|gb|EFA80383.1| hypothetical protein PPL_07217 [Polysphondylium pallidum PN500]
Length = 355
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 10/112 (8%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++YL G R L+E L+ + Y + I + +L Q + S+
Sbjct: 199 KILYLCGNLRRDELPSMLVEPAFKLKELVVYETTSIIINDMNDVDLDQQQQHPSGVSHST 258
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
V + + A AI + V VA P SLL+ +
Sbjct: 259 VK----------LGHRIAAIGKTTAQAIESHGIRVDAVALQPTPNSLLESIE 300
>gi|255533333|ref|YP_003093705.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366]
gi|255346317|gb|ACU05643.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366]
Length = 526
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 62/228 (27%), Gaps = 13/228 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM-PLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+ I+R + + ++ ++K +I + L + + I +S S+
Sbjct: 303 KVFISREVGEHNYFRKALEKH-HIAIEDRSLIRTFPIVTVLDPFYLKHIDWIFFSSRNSV 361
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
G A T + E K ++
Sbjct: 362 DYFFNLKPMLPKHVKFGVAGRGSEDSLRRTGHLADYVGEGGDIDEVAELFAEEVSGKTVL 421
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ + ++ + + Y + + T ++L +F + S+V
Sbjct: 422 FPRAQDSL-LSIQKALKPDTKVIDLPIYETVIEEDIDQTYADVL------IFTSPSNVDA 474
Query: 181 -FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F L + + N+ A + + P E L +
Sbjct: 475 YFVDNLLEPGQ--RVIAIGNSTAKKFEEMGVDCIL-PYSPDEIGLAEA 519
>gi|289805839|ref|ZP_06536468.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 75
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVT 214
M+ + ++ + + +SL + L +S +A +
Sbjct: 1 MRWHTRGVTTLVVTSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIK 60
Query: 215 VACFPKETSLLKLLP 229
VA +LL+ L
Sbjct: 61 VADNADNDALLRALQ 75
>gi|45644675|gb|AAS73063.1| unknown [uncultured marine gamma proteobacterium EBAC20E09]
Length = 216
Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 68/212 (32%), Gaps = 16/212 (7%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I+ TR + K G +PL + + + I S S+
Sbjct: 1 MNIIDTRS---NIAFSN--HKKG-SIKNIPLFELKSFEYA---LPSKDFTDIIFQSIPSV 51
Query: 61 STLPANFCRHTP-IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
I+ +G ++ QKGF I S L K++
Sbjct: 52 EFFKEKDHLINKDIYTMGPSTKNFLLQKGFDSICPAIPGSKELIKLLP-----NLNNNKY 106
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + G DYL ++K + I CY + +K ADA++F +
Sbjct: 107 LIVKGDDGLSDIFDYLYKNKNNVEEISCYKRVKFKSYDD-VKESFLKADAVIFSSTFGAQ 165
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKN 211
FF + + A +SN I + I
Sbjct: 166 IFFEEIYSSDVKAKLFGISNRIINYISDIGYE 197
>gi|146075887|ref|XP_001462798.1| hypothetical protein [Leishmania infantum JPCM5]
gi|134066878|emb|CAM60019.1| hypothetical protein LINJ_03_0660 [Leishmania infantum JPCM5]
gi|322496235|emb|CBZ31307.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 286
Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/262 (10%), Positives = 59/262 (22%), Gaps = 47/262 (17%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-----LAMQQSYGAIAITSS 57
I+IT P + R + ++ IP+ +P+ + ++ IA S
Sbjct: 6 ILITAPEVYSKRFAQALEARSLIPMAVPVIETVATPDTADMRALLEQDLNGIDYIAFCSR 65
Query: 58 ESLSTLPANFCRHT------------------------------PIFAIGEASACLARQK 87
++ +L A A+
Sbjct: 66 CAVDSLSAALDHRYGGGGESVSERAGSAPAVNEDRRATTVVKVLAKCALAAIGKDADYVL 125
Query: 88 GFTQIFHGKDNSINLAKIIVEQKVLFTPQK---------PLIYLGGKPRNFHFEDYLIEH 138
+I I + + + F D L
Sbjct: 126 ERLRIRPAICPDEPSPAGIAAKLAESGRAEGRTIAVLAPCVEGFAEPDVVPRFVDQLKGM 185
Query: 139 KIPLRVIDCYYSQDIAYPE---TTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL 195
+ + +D Y ++ ++ + + F + + ++
Sbjct: 186 GMKVVRVDAYVTRPVSEEAVSTAVTALKNGSVRGVAFASAGEIAVLLRRSPRCLMNIDVA 245
Query: 196 CLSNNIASAIPASYKNVVTVAC 217
C A V VA
Sbjct: 246 CFGPYTAGFAAKHGVKVSCVAK 267
>gi|295704582|ref|YP_003597657.1| uroporphyrinogen-III synthase [Bacillus megaterium DSM 319]
gi|294802241|gb|ADF39307.1| uroporphyrinogen-III synthase [Bacillus megaterium DSM 319]
Length = 269
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/244 (9%), Positives = 62/244 (25%), Gaps = 31/244 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPL-----SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANF 67
+ ++ +G P++ P H + ++ +Y T+ L
Sbjct: 18 EEISKIVENLGGTPLIRPAQGTIFLDDTHLEADIKELVKGNYDWFIFTTGVGTEILYKTA 77
Query: 68 CRHTPIFAIGEASACLARQKGFTQIFHG----------KDNSINLAKIIVEQKVLFTPQK 117
+ + + + +D+ + A ++ K
Sbjct: 78 EKLGLADEFLSSLQAAHIAARGYKTVNMLKKLGVTPTVRDDDGSTAGLVRALHSFSFEGK 137
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQNADAIL-FYA 174
+ D+L K + I Y E + L+ + F +
Sbjct: 138 HVALQLHGDPAPKLIDFLSNQKAQFKEILPYQHIPPKSEVMEQLINELISGKIDAVNFTS 197
Query: 175 RSSVLYFFSLPLPAKISAAF----------LCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ FS + + + A+A+ + + + P + +
Sbjct: 198 APQARFLFSFAREHGQADHIRELFKSSVVAVSVGKVTAAALKEEGVDRIVI---PDQERM 254
Query: 225 LKLL 228
+
Sbjct: 255 GSAI 258
>gi|294340527|emb|CAZ88911.1| putative Uroporphyrinogen III synthase (U3S, HemD) [Thiomonas sp.
3As]
Length = 335
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 10/145 (6%)
Query: 95 GKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA 154
N++ LA + + G P + L ++VI+ Y
Sbjct: 182 ALWNALQLAFAPGPVASFPWAGRHALIFRGGPGRDLLQRKLEAAGAKVKVIEAYSRLAPE 241
Query: 155 YPETT---MKNLLQNADAILFYARSSVLYFFSLPLPAKISA------AFLCLSNNIASAI 205
Y T ++ L + LF + +V L PA + A L + IASA+
Sbjct: 242 YNAQTAALLQTALGSGGWWLFSSTEAVHNLQRLLEPAGLDAAVLHPQRALAIHPRIASAL 301
Query: 206 PASYKNVVTVACFPKETSLLKLLPL 230
+ V + P E +L L
Sbjct: 302 SEAGFGRVELTRAPLEE-VLSTLHR 325
>gi|328774072|gb|EGF84109.1| hypothetical protein BATDEDRAFT_84835 [Batrachochytrium
dendrobatidis JAM81]
Length = 289
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 70/252 (27%), Gaps = 41/252 (16%)
Query: 18 KIQKMGYIPVMMPLSY---FIHDRESVFLAMQQSYGAIAITSSESLSTLPANF------- 67
G+ +P+ + L S + TS + +
Sbjct: 31 AFSNHGFQCFFVPVLQSSFCNTCSLASVLKNPASTMGLIFTSKNAALAVCHYLQTASISL 90
Query: 68 ---CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII---------VEQKVLFTP 115
P++++G +++ R GF I N+ LAK+I + V
Sbjct: 91 DPEWFKMPVYSVGASTSIPLRSIGFHPIGESTGNAAELAKLIVSDLVTMHGSLENVQKAC 150
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK-------------- 161
+P + G L IPL+ I Y + ++
Sbjct: 151 TRPWTFFVGDKTRDVLSVQLQSALIPLQCIKVYEMKGREDVLEHLEYHVSDLFSNIASVK 210
Query: 162 --NLLQNADAILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVA 216
+ ++F++ S + L A C+ A + V VA
Sbjct: 211 RPDFDLREIWLVFFSPSGIDVVLQHGLIAMHRIPHVHIACIGKTTADHACSVGLCVSAVA 270
Query: 217 CFPKETSLLKLL 228
P L+ +
Sbjct: 271 TRPTPDMLMDAI 282
>gi|152965293|ref|YP_001361077.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Kineococcus radiotolerans SRS30216]
gi|151359810|gb|ABS02813.1| Uroporphyrinogen III synthase HEM4 [Kineococcus radiotolerans
SRS30216]
Length = 387
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/234 (9%), Positives = 52/234 (22%), Gaps = 30/234 (12%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITSSESLSTLP 64
++ ++ G V P + E L + + IT+ L
Sbjct: 37 RSGDMVATFERKGARVVHAPTMRIVPLTEDDQLLAETRDVIADPPDDVLITTGIGLRGWV 96
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVEQKVLFT 114
+ E + S A+ +
Sbjct: 97 EAADAAGLAAPLLETFGRARLFARGPKATGVIRANGLREEWSAASEQTAEAVQRLVTEGV 156
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAI 170
+ ++ + + L +R + Y A P + + + DA+
Sbjct: 157 AGRSIVVQLHGAADQDQLEPLRAAGARVRGVSVYRWLPPADPVAVERLVDLVATRRLDAV 216
Query: 171 LFYARSSVLYFFSLPLPAKI--SAAFLC--------LSNNIASAIPASYKNVVT 214
F + L + C + + A + A +
Sbjct: 217 TFTSAPGALALLEVARRQGRLDEVVAACGNGVVACAVGDVTAEPLRAVGVEPLI 270
>gi|313206849|ref|YP_004046026.1| uroporphyrinogen iii synthase hem4 [Riemerella anatipestifer DSM
15868]
gi|312446165|gb|ADQ82520.1| Uroporphyrinogen III synthase HEM4 [Riemerella anatipestifer DSM
15868]
gi|315023923|gb|EFT36925.1| Uroporphyrinogen-III synthase [Riemerella anatipestifer RA-YM]
Length = 219
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 66/227 (29%), Gaps = 19/227 (8%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I++T + ++ + G ++ + TS+ +
Sbjct: 5 ILLT--KEINPEKRQLLLNEGLEVDTKDFIRIKFINTEKISLRNKT---LIFTSANGVEG 59
Query: 63 LPANFC--RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
N H+ + +G + +KG + K+ + I+ +Q +
Sbjct: 60 FFKNGFDAPHSSVICVGGKTESKLAEKGIKTLHTAKNAEELASFILQQQWDNPD----FV 115
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ G E + H Y ++ + + DA++F++ S V
Sbjct: 116 HFCGNLALDTLEKSIANHNANYIKKIVYETELLYPTLN------KKYDALVFFSPSGVRS 169
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F + C+ N A + ++ LL L
Sbjct: 170 FVKN--NSITDEMVFCIGNTTALEVAKYTSQKPIISTKQNLNDLLSL 214
>gi|296330675|ref|ZP_06873152.1| uroporphyrinogen-III synthase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305673931|ref|YP_003865603.1| putative uroporphyrinogen-III synthase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296152139|gb|EFG93011.1| uroporphyrinogen-III synthase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412175|gb|ADM37294.1| putative uroporphyrinogen-III synthase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 270
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/240 (11%), Positives = 54/240 (22%), Gaps = 31/240 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTLPANF 67
I+K G PV+ PL ++ E +++ + T+ TL
Sbjct: 19 EEISTIIEKQGGTPVIRPLQGTVYLAEKQVEPDLRTFAEEKADWVIFTTGIGTETLVDMA 78
Query: 68 CRHTPIFAIGEASACLARQKGFT----------QIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ +A D +I + K
Sbjct: 79 EKIGLKDEFLQAIRQAKAACRGYKTLSALKKLGITPEASDEDGTTRGLIRSLEPYDFSGK 138
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET---TMKNLLQNADAILFYA 174
++ +L E + I Y + + DA+ F
Sbjct: 139 TVMVQLHGENAPALIAFLEEKGASVLPILPYQHIPPEEETVERLCRELMNGEIDAVCFTT 198
Query: 175 RSSVLYFFSLPLP----------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V F + A + A A+ + P+ +
Sbjct: 199 AIQVRSLFDFAKARGYIDEVKAVFEERAIAAAVGKVTAEALREEGITRLL---APEIERM 255
>gi|294499240|ref|YP_003562940.1| uroporphyrinogen-III synthase [Bacillus megaterium QM B1551]
gi|294349177|gb|ADE69506.1| uroporphyrinogen-III synthase [Bacillus megaterium QM B1551]
Length = 269
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 64/244 (26%), Gaps = 31/244 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPL-----SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANF 67
+ ++ +G IP++ P H + ++ +Y T+ L
Sbjct: 18 EEISKIVENLGGIPLVRPAQGTIFLDDTHLEADIKELVKGNYDWFIFTTGVGTEILYKTA 77
Query: 68 CRHTPIFAIGEASACLARQKGFTQIFHG----------KDNSINLAKIIVEQKVLFTPQK 117
+ + + + +D+ + A ++ K
Sbjct: 78 DKLGLADEFLSSLKAANIAARGYKTVNMLKKLGVTPTVRDDDGSTAGLVRALHSFSFEGK 137
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA-YPETTMKNLLQ--NADAILFYA 174
+ D+L K + I Y + N L DA+ F +
Sbjct: 138 HVALQLHGDPAPKLIDFLSNQKAQFKEILPYQHIPPKAEIMEQLINELISGKIDAVNFTS 197
Query: 175 RSSVLYFFSLPLPAKISAAF----------LCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ FS + + + A+A+ + + + P + +
Sbjct: 198 APQARFLFSFAREHGQADHIRELFKSSVVAVSVGKVTAAALKEEGVDRIVI---PDQERM 254
Query: 225 LKLL 228
+
Sbjct: 255 GSAI 258
>gi|296129621|ref|YP_003636871.1| Uroporphyrinogen III synthase HEM4 [Cellulomonas flavigena DSM
20109]
gi|296021436|gb|ADG74672.1| Uroporphyrinogen III synthase HEM4 [Cellulomonas flavigena DSM
20109]
Length = 369
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/256 (8%), Positives = 62/256 (24%), Gaps = 33/256 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
+++T ++A + +++ G P + + L + + +T+
Sbjct: 11 VLVT-ADRRAAELRAALERRGATVRHAPALGMVPHTDDALLLARTRDLLADPPDTVVVTT 69
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK------ 110
+ E A + + A + E +
Sbjct: 70 GIGFRGWVEAADAAGIADRLLEVLATTRIVARGPKARGAIQAAGLSADWVAESETSAEIA 129
Query: 111 ----VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP----ETTMKN 162
+ ++ ++ +R + Y P ++
Sbjct: 130 EVLLDEGVAGRDVVIQHHGAGADGLDEAFAAAGARVRSLVVYRWGPPPDPDLVRDSARAV 189
Query: 163 LLQNADAILFYARSSVLYFFS-----------LPLPAKISAAFLCLSNNIASAIPASYKN 211
D ++F + + + L + F + A + +
Sbjct: 190 ADGEIDTVVFTSAPGAAAWVAAARDADALDGVLRRHTSGAVVFAAVGPVTAKPLVDVGID 249
Query: 212 VVTVACFPKETSLLKL 227
V + SL++
Sbjct: 250 P-LVPDRGRLGSLVRA 264
>gi|284029383|ref|YP_003379314.1| Uroporphyrinogen III synthase HEM4 [Kribbella flavida DSM 17836]
gi|283808676|gb|ADB30515.1| Uroporphyrinogen III synthase HEM4 [Kribbella flavida DSM 17836]
Length = 375
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/255 (9%), Positives = 60/255 (23%), Gaps = 33/255 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITS 56
I +T ++A ++ G + P + + L + +T+
Sbjct: 13 IAVT-AHRRADDLIASFERRGAKVLHAPTLQIVPAPDDQTLIEATRRVIANPPDDVVVTT 71
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF----------HGKDNSINLAKII 106
+ + + H S +++
Sbjct: 72 AVGFRGWVEAADTAGLAADLLGTLEQARLLARGPKARGAIRAAGLVEHWSARSETTTEVV 131
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--- 163
K + ++ +D L + +R ++ Y P + +
Sbjct: 132 EWLKDQGVAGRKIVVQLHGMSEPGLQDTLRQAGASVRGLEVYRWGPAPDPVVVERVIGQI 191
Query: 164 -LQNADAILFYARSSVLYFFSLPLPAKISAAFL-----------CLSNNIASAIPASYKN 211
DA++ + + A + C+ A A
Sbjct: 192 SAGAVDAVVHTSAPAAQAMLDAAALNGQYDALVTALRTGRVLNACVGPVTAGPFVALGLE 251
Query: 212 VVTVACFPKETSLLK 226
V + +L++
Sbjct: 252 P-LVPDRYRLGALIR 265
>gi|213512240|ref|NP_001135006.1| Uroporphyrinogen-III synthase [Salmo salar]
gi|209737962|gb|ACI69850.1| Uroporphyrinogen-III synthase [Salmo salar]
Length = 214
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/193 (11%), Positives = 54/193 (27%), Gaps = 21/193 (10%)
Query: 1 MYIVITR-PIKKAL---RTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIA 53
M++++ + P + +++ G+ ++P+ F + L + +G +
Sbjct: 1 MHVLLLKEPREGGSGPDPYIKELASRGHKATLIPVLSFTFVSLNTLSDKLFQPEQHGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKV-- 111
TS ++ + K + + ++ +
Sbjct: 61 FTSPRAVEAVRMCLEDDERREQWNNDIKDKWNAKSIYVVGKATAALVENLGLVPLGEDTG 120
Query: 112 ------------LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
T PL + G + L E+ +PL + Y + E
Sbjct: 121 TADVLSRLILEREDTNILPLFFPCGSIKREVLPTALRENGVPLDTLMVYQTAQHPDLEKN 180
Query: 160 MKNLLQNADAILF 172
+KN
Sbjct: 181 LKNHFTEQALSTH 193
>gi|154685664|ref|YP_001420825.1| uroporphyrinogen-III synthase [Bacillus amyloliquefaciens FZB42]
gi|154351515|gb|ABS73594.1| YjjA [Bacillus amyloliquefaciens FZB42]
Length = 272
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 59/242 (24%), Gaps = 35/242 (14%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTLPANF 67
I+K G V+ L ++ E +++ + T+ TL +
Sbjct: 19 EEITRLIEKQGGTAVVRSLQGTVYLAEDQIEPDVRTFAGQKADWVIFTTGIGTETLLSVS 78
Query: 68 CRHT------------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ I G + ++ H D +I +
Sbjct: 79 EKIGLKEEFLAAVHEAKIGCRGYKTYAALKK--LGITPHASDEDGTTRGLIRSLERFDFK 136
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA---YPETTMKNLLQNADAILF 172
K ++ + +L ++ + + Y + + L DA+ F
Sbjct: 137 DKKVMIQLHGEKAPVLTQFLEKNGAEVFPVLPYQHILPERETVDKLLGELLNGEVDAVCF 196
Query: 173 YARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
V F L + + A AI V P
Sbjct: 197 TTAIQVRSLFDYAKEKGSTKELQQAFEKQVLAAAVGKVTAEAIRDEGVKRVL---APDIE 253
Query: 223 SL 224
+
Sbjct: 254 RM 255
>gi|291483734|dbj|BAI84809.1| uroporphyrinogen-III synthase [Bacillus subtilis subsp. natto
BEST195]
Length = 270
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 58/240 (24%), Gaps = 31/240 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTLPANF 67
I+K G IPV+ PL ++ E +++ + T+ L TL
Sbjct: 19 EEISTIIEKQGGIPVIRPLQGTVYLAEKQVEPDLRTFAEEKADWVIFTTGIGLETLVDMA 78
Query: 68 CRHTPIFAIGEASACLARQKGFT----------QIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ +A D +I + K
Sbjct: 79 EKIGLKDEFLQAIRQAKAACRGYKTLSALKKLGITPEASDEDGTTRGLIRSLEPHDFSGK 138
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP---ETTMKNLLQNADAILFYA 174
++ + +L E + I Y + + + DA+ F
Sbjct: 139 TVMVQLHGEKAPALMAFLEEKGASVLPILPYQHIPPEEETVEQLCRELMNDEVDAVCFTT 198
Query: 175 RSSVLYFFSLPLP----------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V F + A + A A+ + P+ +
Sbjct: 199 AIQVRSLFDFAKGRGYINEVKKVFEERAIAAAVGKVTAEALREEGITRLL---APEIERM 255
>gi|212550635|ref|YP_002308952.1| hydroxymethylbilane synthase/uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548873|dbj|BAG83541.1| hydroxymethylbilane synthase/uroporphyrin-III
C-methyltransferase/uroporphyrinogen-III synthase
[Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 682
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 47/187 (25%), Gaps = 14/187 (7%)
Query: 26 PVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSESLSTLPANFCRHTP-------IF 74
+ PL + L + I TS + + ++
Sbjct: 484 AIHTPLIKINKIENNKRLYTSIKEISVFDWIIFTSRYGVYYFFESLNEMKLDMKVLSAVY 543
Query: 75 AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDY 134
A + S + +I KV+ +K ++ + +
Sbjct: 544 IASVGKATSLELNKHGFYADIESESESAEGLINYFKVMRLTRKRILLPRSNRGLKYLSEL 603
Query: 135 LIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAF 194
L + + I Y ++ E + Q I+F + S V F L
Sbjct: 604 LEQLGNEVIDIPVYTNEINDKAEKVDLSFFQK---IVFSSPSGVNAFIQLYRMLPSGIQM 660
Query: 195 LCLSNNI 201
+
Sbjct: 661 IAKGKTT 667
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
I++ R + E ++++G + +P+ + + I +S ++
Sbjct: 587 RILLPRSNRGLKYLSELLEQLGNEVIDIPVYTNE-INDKAEKVDLSFFQKIVFSSPSGVN 645
Query: 62 TLPA 65
Sbjct: 646 AFIQ 649
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 22/83 (26%), Gaps = 11/83 (13%)
Query: 161 KNLLQNADAILFYARSSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVT 214
+ D I+F +R V YFF K+ + + +
Sbjct: 505 IKEISVFDWIIFTSRYGVYYFFESLNEMKLDMKVLSAVYIASVGKATSLELNKHGFYADI 564
Query: 215 VACFPKETSLLK-----LLPLRR 232
+ L+ L +R
Sbjct: 565 ESESESAEGLINYFKVMRLTRKR 587
>gi|255023909|ref|ZP_05295895.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL J1-208]
Length = 184
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 57/168 (33%), Gaps = 12/168 (7%)
Query: 69 RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
++T + AIG+ + +KG K S ++I+E + G +
Sbjct: 19 KNTHLTAIGKQTKEAFSEKGIIPDSFIKRRST---ELILEHLPRLQKNAS-NLIIGSIVD 74
Query: 129 FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA 188
+ ++ + ++ Y + + L + + + F + SV +
Sbjct: 75 TAEVNAILAEVEAMEMMPLYDMRPVTERP----FDLASFEQVCFSSSRSVQNLLDVLTTE 130
Query: 189 KISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + L + ++ + + N A SL++L+ +
Sbjct: 131 EKAILQTKTILSIGRFTSATLASFGINNFIEAENATPESLIELIQKTK 178
>gi|288917314|ref|ZP_06411682.1| Uroporphyrinogen III synthase HEM4 [Frankia sp. EUN1f]
gi|288351336|gb|EFC85545.1| Uroporphyrinogen III synthase HEM4 [Frankia sp. EUN1f]
Length = 386
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/255 (7%), Positives = 56/255 (21%), Gaps = 36/255 (14%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPAN 66
+++ G + P + + L + T+
Sbjct: 25 EEFGAALERRGARVLYGPAIRIVPLADDTELRQATERCLTAPLDVVVATTGIGFRGWMEA 84
Query: 67 FCRHTPIFAIGEASACLA-----------RQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + +A + + ++ + + +
Sbjct: 85 ADAWDLLDPLTKAIGSATLLARGPKARGAIRASGLREAWSPESESSSEVLEHLIERDDLD 144
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNADAIL 171
+ + D L + + Y + + DA+
Sbjct: 145 GRRIAVQQHGEPLPDLVDTLRLAGADVIEVPVYRWIGPEDVTPLRRLIDAVATTELDAVA 204
Query: 172 FYARSSVLYFFSLPLPAKIS----------AAFLCLSNNIASAIPASYKNVVTVACFPKE 221
F + + + F + C+ A + V+ +
Sbjct: 205 FTSAPAAVSFLRSADEQGLGEAVHEALLGPVVAACVGPVTAGPLLERDIPVIA-PPRARL 263
Query: 222 TSL----LKLLPLRR 232
+L ++ +P RR
Sbjct: 264 GALVREIVEQIPRRR 278
>gi|255027472|ref|ZP_05299458.1| uroporphyrinogen-III synthase [Listeria monocytogenes FSL J2-003]
Length = 184
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 46/166 (27%), Gaps = 3/166 (1%)
Query: 19 IQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGE 78
+ GY + +PL + ++ QQ + +TS+ ++ N +
Sbjct: 1 FSQNGYEVMSIPLIKTQPIKINLS-REQQETDWLFLTSANAVEYFFTNQYERSNYKIAVI 59
Query: 79 ASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEH 138
+ F + + E + ++ +D LIE
Sbjct: 60 GEKTKEKLAEFGHEPSFVPSIYQSEVFLEEWLNENPEKTSILLPQSNLSRTIIKDTLIEK 119
Query: 139 KIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVLYFF 182
+ I+ Y + + + L I+F +
Sbjct: 120 GYIVFSIELYKTIFPEASKKLLTEQLKLNETQIIVFCQPICMEKLL 165
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 27/92 (29%), Gaps = 4/92 (4%)
Query: 135 LIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAF 194
++ + I +Q I + Q D + + ++V YFF+ + +
Sbjct: 1 FSQNGYEVMSIPLIKTQPIKIN---LSREQQETDWLFLTSANAVEYFFTN-QYERSNYKI 56
Query: 195 LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + V + L+
Sbjct: 57 AVIGEKTKEKLAEFGHEPSFVPSIYQSEVFLE 88
>gi|281415817|ref|ZP_06247559.1| uroporphyrinogen-III synthase [Micrococcus luteus NCTC 2665]
Length = 242
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 58/244 (23%), Gaps = 50/244 (20%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPV-------MMPLSYFIHDRESVFLAMQ------- 46
M +++TR +A + + G +PL+ F + L
Sbjct: 1 MRVLLTRQPAQAGDLEAGL--AGAEVAGRRLRVGFLPLTDFALPDDDGPLRALLADWAGA 58
Query: 47 ----------QSYGAIAITSSESLSTLPANFCRHT-----PIFAIGEASACLARQKGFTQ 91
+ +TS+ ++ L A I A G +A + + G
Sbjct: 59 DGDAAGPVRSDGSRWLVLTSANTVRALRAVGWDGHVPAGARIAATGPGTARVLTEAGCDA 118
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ +I L L +R Y +
Sbjct: 119 APWLPPEDRSAEGLIAGLAALHPRGARAWLPQSDRARPRLAHGLRAAGWDVRTGLAYRTV 178
Query: 152 DIAYPE-----------------TTMKNLLQNADAILFYARSSVLYFFS--LPLPAKISA 192
+ + A++ + S+V F + L A
Sbjct: 179 PYPAQAGRRLLDGADEGRGDVVTPARLSAVAAGTAVVLTSSSAVEEFVAAGLAPLAGERV 238
Query: 193 AFLC 196
+
Sbjct: 239 RLVA 242
>gi|255513654|gb|EET89919.1| Uroporphyrinogen III synthase HEM4 [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 237
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 55/219 (25%), Gaps = 10/219 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM--QQSYGAIAITSSES 59
+++ R + T +++K + + + L S + TS S
Sbjct: 7 RVLVLRSSENLAETCAELRKASIECIPVEAIRAEAVAQEGRLMRSMIASADYVIFTSKNS 66
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
++ + F + +++ P L
Sbjct: 67 IAFSKSYFSGVYAGHKFLTCGISTKTFAEESGFRVSYAPKTGGINAVIKWLKAKRPGPVL 126
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
G N ++ + + Y + + +LF++ + V
Sbjct: 127 CISGESSSND--FLQVLLRGFTVIEVGVYRIKR--LRPKIPAEAITGISHVLFFSSAEVD 182
Query: 180 YFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVT 214
F S + +C+ A ++ V
Sbjct: 183 VFRDAVASHNGLDFDSVSAVCIGRKTFERAAAIFRKPVL 221
>gi|326382794|ref|ZP_08204484.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Gordonia neofelifaecis NRRL B-59395]
gi|326198384|gb|EGD55568.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Gordonia neofelifaecis NRRL B-59395]
Length = 382
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/264 (10%), Positives = 60/264 (22%), Gaps = 43/264 (16%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITS 56
+ IT ++A + + G P I + L + + T+
Sbjct: 17 VAIT-AARRAEEFGALLTRRGARVSAAPAIEMIPLSDDPALRAGTEAVIASPPDLLIPTT 75
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHG----------KDNSINLAKII 106
+ A A ++ S + A+++
Sbjct: 76 GIGFRGWIEAADEWGLADDLMAAFAGARIISRGPKVTGALRAAGLREEWSPESESSAEVL 135
Query: 107 VEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
+ + + N F D L + + Y Q A +
Sbjct: 136 AHLRPEDVEGRRVAVQLHGAIDDWDPNRDFVDGLAAMGAEVVSVPVYSWQRPADLDAFDA 195
Query: 162 NL----LQNADAILFYARSSVLYFFSLPLPAKISAAFL----------CLSNNIASAIPA 207
+ DA+ F + + + + L C+ A+ +
Sbjct: 196 LIADVAACRIDAVTFTSGPAAVSMMTRARELGEQDRLLTALQGPVAVYCVGPVTAAPLEI 255
Query: 208 SYKNVVTVACFPKETSL-LKLLPL 230
+ + L L
Sbjct: 256 AGVTTSW------PERMRLGALAR 273
>gi|23004380|ref|ZP_00047741.1| hypothetical protein Magn03000407 [Magnetospirillum magnetotacticum
MS-1]
Length = 218
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 76/193 (39%), Gaps = 14/193 (7%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ + +TS+ +++ L A P+FA+G +A A+ G ++F ++ LA
Sbjct: 6 PPAGPFDGVILTSANAVAPLAATGLAGPPVFAVGRRTAERAQAAGLGRVFCADGDAAGLA 65
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
+++ TP L+++ G+ R E L + Y ++ +
Sbjct: 66 RLVA---DQLTPGSLLLHVAGEDRKAEPEASLQMAGYRILSWTAYAARALEALPEPAARA 122
Query: 164 L------QNADAILFYARSSVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNV 212
L DA L Y+R S L A +S AF CLS ++A+ +
Sbjct: 123 LAGESGAPPLDAALHYSRRSAETAERLCREAGLSGAFRALAHYCLSADVAAGLVELGIPA 182
Query: 213 VTVACFPKETSLL 225
A P E ++L
Sbjct: 183 HFGAAPPNEEAIL 195
>gi|308173198|ref|YP_003919903.1| uroporphyrinogen-III synthase [Bacillus amyloliquefaciens DSM 7]
gi|307606062|emb|CBI42433.1| uroporphyrinogen-III synthase [Bacillus amyloliquefaciens DSM 7]
gi|328553878|gb|AEB24370.1| uroporphyrinogen-III synthase [Bacillus amyloliquefaciens TA208]
gi|328911264|gb|AEB62860.1| uroporphyrinogen-III synthase [Bacillus amyloliquefaciens LL3]
Length = 285
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 60/240 (25%), Gaps = 31/240 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTLPANF 67
I+K G V+ L ++ E +++ + T+ TL +
Sbjct: 32 EEITRLIEKQGGTAVVRSLQGTVYLAEEQIEPDVRTFAEQKADWVIFTTGIGTETLLSVS 91
Query: 68 CRHTPIFAIGEASACLARQKGFTQIF----------HGKDNSINLAKIIVEQKVLFTPQK 117
+ A + + H D +I + K
Sbjct: 92 EKIGLKEEFLAAVHEANIGCRGYKTYAALKKLGVTPHASDEDGTTRGLIRSLERFELKDK 151
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP--ETTMKNLLQ-NADAILFYA 174
++ + ++L ++ + + Y + + LL DA+ F
Sbjct: 152 KVMIQLHGEKAPVLTEFLEKNGAEVFPVLPYQHIPPERETVDKMLGELLNGEVDAVCFTT 211
Query: 175 RSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V F L + + A AI N V P +
Sbjct: 212 AIQVRSLFDYAKEKGSAKELQQAFETHVLAAAVGKVTAEAIRDEGVNRVL---APDIERM 268
>gi|58260622|ref|XP_567721.1| uroporphyrinogen-III synthase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117007|ref|XP_772730.1| hypothetical protein CNBK1040 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255348|gb|EAL18083.1| hypothetical protein CNBK1040 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229802|gb|AAW46204.1| uroporphyrinogen-III synthase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 299
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/125 (9%), Positives = 32/125 (25%), Gaps = 7/125 (5%)
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---LLQNA 167
P ++L G L ++ + Y + + ++ +++
Sbjct: 170 ASEVSHGPYLFLCGDKSLDEMPTALRSEGRTVKEVVVYTTSARHDFQQGLRRLETPVRHK 229
Query: 168 DAILFYARSSVLYFFSLPLPAKISA---AFLCLSNNIASAI-PASYKNVVTVACFPKETS 223
+ F++ SS + + + V VA P
Sbjct: 230 GWLAFFSPSSAAIVMPQIKQDNGRWDGWRVFAIGETTKKYLEEEAKMEVHAVADRPDAIG 289
Query: 224 LLKLL 228
+ +
Sbjct: 290 TFEAI 294
>gi|321314964|ref|YP_004207251.1| uroporphyrinogen-III synthase [Bacillus subtilis BSn5]
gi|320021238|gb|ADV96224.1| uroporphyrinogen-III synthase [Bacillus subtilis BSn5]
Length = 270
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 57/240 (23%), Gaps = 31/240 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTLPANF 67
I+K G IPV+ PL ++ E +++ + T+ L TL
Sbjct: 19 EEISTIIEKQGGIPVIRPLQGTVYLAEKQVEPDLRTFAEEKADWVIFTTGIGLETLVDMA 78
Query: 68 CRHTPIFAIGEASACLARQKGFT----------QIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ +A D +I + K
Sbjct: 79 EKIGLKDEFLQAIRQAKAACRGYKTLSALKKLGITPEASDEDGTTRGLIRSLEPHDFSGK 138
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET---TMKNLLQNADAILFYA 174
++ + +L E + I Y + + DA+ F
Sbjct: 139 TVMVQLHGEKAPALMAFLEEKGASVLPILPYQHIPPEEETVERLCRELMNDEIDAVCFTT 198
Query: 175 RSSVLYFFSLPLP----------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V F + A + A A+ + P+ +
Sbjct: 199 AIQVRSLFDFAKGRGYINEVKKVFEERAIAAAVGKVTAEALREEGITRLL---APEIERM 255
>gi|16078288|ref|NP_389105.1| uroporphyrinogen-III synthase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309072|ref|ZP_03590919.1| uroporphyrinogen-III synthase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313399|ref|ZP_03595204.1| uroporphyrinogen-III synthase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318322|ref|ZP_03599616.1| uroporphyrinogen-III synthase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322595|ref|ZP_03603889.1| uroporphyrinogen-III synthase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|81342306|sp|O34394|YJJA_BACSU RecName: Full=Uncharacterized protein yjjA
gi|2612895|gb|AAC46319.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
gi|2633577|emb|CAB13080.1| putative enzyme [Bacillus subtilis subsp. subtilis str. 168]
Length = 270
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 57/240 (23%), Gaps = 31/240 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTLPANF 67
I+K G IPV+ PL ++ E +++ + T+ L TL
Sbjct: 19 EEISTIIEKQGGIPVIRPLQGTVYLAEKQVEPDLRTFAEEKADWVIFTTGIGLETLVDMA 78
Query: 68 CRHTPIFAIGEASACLARQKGFT----------QIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ +A D +I + K
Sbjct: 79 EKIGLKDEFLQAIRQAKAACRGYKTLSALKKLGITPEASDEDGTTRGLIRSLEPHDFSGK 138
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET---TMKNLLQNADAILFYA 174
++ + +L E + I Y + + DA+ F
Sbjct: 139 TVMVQLHGEKAPALMAFLEEKGASVLPILPYQHIPPEEETVERLCRELMNDEVDAVCFTT 198
Query: 175 RSSVLYFFSLPLP----------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V F + A + A A+ + P+ +
Sbjct: 199 AIQVRSLFDFAKGRGYINEVKKVFEERAIAAAVGKVTAEALREEGITRLL---APEIERM 255
>gi|157692570|ref|YP_001487032.1| uroporphyrinogen-III synthase [Bacillus pumilus SAFR-032]
gi|157681328|gb|ABV62472.1| uroporphyrinogen-III synthetase [Bacillus pumilus SAFR-032]
Length = 273
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 58/247 (23%), Gaps = 34/247 (13%)
Query: 6 TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIA------- 53
TR K + ++K G V+ L + + +++ +
Sbjct: 15 TR---KTEEMRTLVEKQGGQAVIRSLQGTVFLAKEELKPGIETFVKKGADWVVLTTGIGT 71
Query: 54 ---ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
I S+E L + A K D + +I + +
Sbjct: 72 DTLIESAEELDLGEEFMHILSNAQIASRGYKTYAALKKRGIQPDVSDEDGTVRDLIAKLE 131
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ---NA 167
K ++ +L E + + Y N
Sbjct: 132 GKEFQGKRVMVQLHGENAPALIQFLHEKGADVLPLLPYQHTPPEPKAAETLLQEMKDGNV 191
Query: 168 DAILFYARSSVLYFFSLPLPAKIS----------AAFLCLSNNIASAIPASYKNVVTVAC 217
A+ F V FF+L + + A A+ + +
Sbjct: 192 HAVCFTTAVQVHAFFTLAAKWGRKEELQALFEQHVLAVAVGKVTAEALKEEGIDRILT-- 249
Query: 218 FPKETSL 224
P +
Sbjct: 250 -PSLERM 255
>gi|330835949|ref|XP_003292024.1| hypothetical protein DICPUDRAFT_156706 [Dictyostelium purpureum]
gi|325077763|gb|EGC31455.1| hypothetical protein DICPUDRAFT_156706 [Dictyostelium purpureum]
Length = 532
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 25/137 (18%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN-------LLQNADAI 170
+Y G R +YL E+ I I Y S+ ++K +
Sbjct: 391 QFLYFCGNNRRDELPNYLKENSIQCNEIIVYNSETFDDSLNSIKELYRRIKINKEQNCWC 450
Query: 171 LFYARSSVLYFFSLPLP------------------AKISAAFLCLSNNIASAIPASYKNV 212
+F++ S V Y + + + + +++ + V
Sbjct: 451 VFFSPSGVEYILDIIGQLSNNIENKKLDYNKETASFWDNIKIVAIGKTTETSLKKNNIRV 510
Query: 213 VTVACFPKETSLLKLLP 229
V+ P SL +
Sbjct: 511 DIVSPLPNAQSLFNSIK 527
>gi|118616899|ref|YP_905231.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium ulcerans Agy99]
gi|118569009|gb|ABL03760.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
Length = 383
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/266 (10%), Positives = 58/266 (21%), Gaps = 43/266 (16%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAIT 55
I +T ++A +++ G P I E L + +
Sbjct: 13 RIAVT-SSRRAEELCALLRRHGADVCSAPAINMIALPEDDELQGNTEALIANPPDILVAH 71
Query: 56 SSESLSTLPANFCRH-------------TPIFAIGEASACLARQKGFTQIFHGKDNSINL 102
+ A I +A+ L + ++S +
Sbjct: 72 TGIGFRGWVAAAEGWGLAGELVDALSVGRTISRGPKATGELRAAGLREEWSPESESSQEV 131
Query: 103 AKIIVEQKVLFTPQK-PLIYLGGKP-RNFHFEDYLIEHKIPLRVIDCYYSQDIA----YP 156
+ ++E V L F L + I + +
Sbjct: 132 LEYLLESGVAGQRIAIQLHGAADGWDPFPEFVGGLRAAGAEVVPIRVSRWKPTPLGGAFD 191
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIP 206
+ + + DA+ F + + I +C+ + +
Sbjct: 192 QLVTEIARRQFDAVSFTSAPAAAAVLERGRELDIEEELLEALRNDVHAMCVGPVTSRPLI 251
Query: 207 ASYKNVVTVACFPKETSL-LKLLPLR 231
L L L
Sbjct: 252 RKGV------PTSSPERLRLGALARH 271
>gi|256395309|ref|YP_003116873.1| uroporphyrinogen III synthase HEM4 [Catenulispora acidiphila DSM
44928]
gi|256361535|gb|ACU75032.1| Uroporphyrinogen III synthase HEM4 [Catenulispora acidiphila DSM
44928]
Length = 391
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/231 (6%), Positives = 44/231 (19%), Gaps = 30/231 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPAN 66
+++ G +M P I + L + T+ +
Sbjct: 40 EELGAILRRRGAEVMMAPTMRIIPLSDDRVLRAATEECLREPLDYAVATTGIGWRAWIST 99
Query: 67 FCRHTPIFAIG----------EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + S + +++
Sbjct: 100 AEGWGLAEPLTAVLGSATLAARGPKATGAIRQCGMRETYSPPSESSTELLAWLLAQDLAG 159
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN----LLQNADAILF 172
+ + F D L + + Y + + + A+ F
Sbjct: 160 TRIAVQLHGSADTAFLDALRGAGAEVVPVPVYQWGAPQDTAAVGRLVEAVVRRQVHAVAF 219
Query: 173 YARSSVL----------YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV 213
+ + + C+ A+ + V
Sbjct: 220 TSAPGAAAFLAAAENDGNLPRVIDAMQADVLAACIGPVCAAPLEPHGITPV 270
>gi|217034073|ref|ZP_03439494.1| hypothetical protein HP9810_893g20 [Helicobacter pylori 98-10]
gi|216943468|gb|EEC22922.1| hypothetical protein HP9810_893g20 [Helicobacter pylori 98-10]
Length = 226
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 44 AMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA 103
+ A+ TS ++ +L + + A + + +
Sbjct: 30 LDPTPFNALIFTSKNAVFSLLETLKNSPKLQILQNIPAYALSEPTAKTLQDHHFKVAFIG 89
Query: 104 K-----IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ V++ + +K ++YL K + L+EH I + Y ++ +
Sbjct: 90 EKAHGKEFVQEILPLLEKKSVLYLRAKEIASPLDAILLEHGIDFKQAVVYENKLKHLTLS 149
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
L +IL + S F + + + N A + A
Sbjct: 150 EQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEKGIQS-YTAQK 208
Query: 219 PKETSLLK-LLPLR 231
P + L+ L LR
Sbjct: 209 PFLEACLELALSLR 222
>gi|293402362|ref|ZP_06646499.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304209|gb|EFE45461.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 486
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/229 (10%), Positives = 61/229 (26%), Gaps = 22/229 (9%)
Query: 9 IKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC 68
+A + +++ G + Y + QS+ + TS++ + L
Sbjct: 262 EHQAAKL---LREQGAWCEEVQCGYCKAIAHTWTKEAFQSFTHVVFTSAQVVHILMKQLQ 318
Query: 69 R---------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ +G+ + Q G + ++ V
Sbjct: 319 EAGFDSRILYQCKLCVMGKGTKKALAQYGLCADLMPNIHDSKHMAELLTASVQKQDH--- 375
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
I L + +E + + + Y +++ + ++ D +L SV
Sbjct: 376 ILLPKAVNGNTYLQKTLETQCKVSYVPLYTIEELPHSIQD-----EDYDGVLMTCPFSVQ 430
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + A+ +T + +K +
Sbjct: 431 QYAKQTKQ--RKQMVYAMGERTKQALIKEGFTSITTLKHAEMEEFVKAI 477
>gi|327473578|gb|EGF18998.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK408]
Length = 479
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/230 (8%), Positives = 56/230 (24%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+I +++ R ++ G P + + + L + + +S
Sbjct: 253 KILI----QQSETGRLPRLLKDAGAALTTFPARDLV-EELDLQLPDLEQVDGLLFADMQS 307
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A + + + Q+ L
Sbjct: 308 WPLFLKALRKAGKDLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAAL 364
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
GG E L + S +A+ + + + ++ +
Sbjct: 365 EKEGGNWYILTAEHKKASL-AELYSLPIIPSHRLAFDSQISSDNWSEMEVVCLPNSAAAM 423
Query: 180 YFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S+L
Sbjct: 424 NFVAASQEAGFDWTDVPIVVMGASTRAVLEEAGFSEIVETDEATIASILD 473
>gi|288931298|ref|YP_003435358.1| uroporphyrinogen III synthase HEM4 [Ferroglobus placidus DSM 10642]
gi|288893546|gb|ADC65083.1| Uroporphyrinogen III synthase HEM4 [Ferroglobus placidus DSM 10642]
Length = 228
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 74/244 (30%), Gaps = 28/244 (11%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M + P A E+I+K G+ P+ +P+ + + + +TS +
Sbjct: 1 MKVAFFSPKNSAEEVIEEIKKFGFTPIHVPMVEIV----EREVNEVRDADYTIVTSKTAA 56
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ + AIGE +A + + F+ S +K + E+ F + +
Sbjct: 57 KMAVSKNFVKGDVIAIGEKTAEILKD------FNPITPSKYDSKTLYEEFRDFLKGRKVN 110
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM---KNLLQNADAILFYARSS 177
L + L+ Y + I E + + DA++F +R
Sbjct: 111 LLRSDKGDEILLKLSEI--CDLKEYVLYEIKPIVGEEQKKIVRRIVEGEIDAVIFSSRLI 168
Query: 178 VLYFFSLPLPAKI---------SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
V FF I + L + + + + L
Sbjct: 169 VRSFFENAKACGIYDKAAKRLNEIKTIALGKPSWEELKKFGVS-AAFPKKYTFS---EAL 224
Query: 229 PLRR 232
L R
Sbjct: 225 KLIR 228
>gi|261749423|ref|YP_003257109.1| uroporphyrinogen-III synthase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497516|gb|ACX83966.1| uroporphyrinogen-III synthase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 260
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 44/193 (22%), Gaps = 10/193 (5%)
Query: 44 AMQQSYGAIAITSSESLST---LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI 100
+ + S +S+ L + PI I + K
Sbjct: 51 INFSDFTVVLFISKKSIDHYFRLAESMRFKVPISMKYVCQTAAIAYYLQKYIVYRKRKIH 110
Query: 101 NLAKIIVEQKVLFTPQ--KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
K + + + L + I + Y + +
Sbjct: 111 IGKKSFQDILPYIKKHSKEKFLLPSSDILKPEIPKMLKKLNIFWKRAILYKTTSSDLSD- 169
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKIS-AAFLCLSNNIASAIPASYKNVVTVAC 217
D ++F++ + + F + N A + +
Sbjct: 170 ---LKNAYYDILVFFSPACIKSLFENFPNFDQNNIKIATFGKNTLDAAYKAGLKIEIKVP 226
Query: 218 FPKETSLLKLLPL 230
PK S+ K L
Sbjct: 227 TPKYPSMAKALEK 239
>gi|46445905|ref|YP_007270.1| uroporphyrinogen-III synthase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399546|emb|CAF22995.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 217
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 46/193 (23%), Gaps = 15/193 (7%)
Query: 28 MMPLSYFIHDRESV-----FLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASAC 82
PL I + + + TS S+ L + ++
Sbjct: 22 HCPLIKIIPRPLTDPCIQKAFRDFHLFTHLIFTSKTSIHLLHDHLSHFGLSLDDWKSKTS 81
Query: 83 LARQKGFTQIFHGKDNSINLAK-------IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYL 135
+A + L +I+E L + + D+
Sbjct: 82 IAVGQVSGSHLRALGIQPALIAKEETAEGLIIELHPLSLQKASFFWPHSAQARSVLVDFF 141
Query: 136 IEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL 195
+ + Y +Q I+F + S+V F + I ++
Sbjct: 142 TDRHLNYYACPFYDTQFRQPEYIPSLEQFDE---IVFTSPSTVHAFAKIFGYFPIDKKYV 198
Query: 196 CLSNNIASAIPAS 208
+ +
Sbjct: 199 TIGPITLQCLQTY 211
>gi|212695968|ref|ZP_03304096.1| hypothetical protein ANHYDRO_00501 [Anaerococcus hydrogenalis DSM
7454]
gi|212677091|gb|EEB36698.1| hypothetical protein ANHYDRO_00501 [Anaerococcus hydrogenalis DSM
7454]
Length = 142
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/137 (10%), Positives = 38/137 (27%), Gaps = 7/137 (5%)
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
H + ++ + + + + L + L I+ Y +
Sbjct: 1 MKVHIVPRNFVGENLLDQMAKYVKKGDKIFFPHSNLSRKKIIEGLGKMG-DLDEIEIYDN 59
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASY 209
+ + + D ++F + S V F + + + + + I
Sbjct: 60 IRAEKEDIDL-----DFDGVVFTSSSCVNNFVEIYGKEPLKNTKIYSIGQITSQTIKNYG 114
Query: 210 KNVVTVACFPKETSLLK 226
V + SL++
Sbjct: 115 LEVYKESKKQSVDSLIE 131
>gi|154331661|ref|XP_001561648.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134058967|emb|CAM36794.1| hypothetical protein LBRM_03_0580 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 285
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 66/277 (23%), Gaps = 48/277 (17%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-----LAMQQSYGAIAITSS 57
I++ P + R + ++ IP+ +P+ I ++ IA S
Sbjct: 5 ILVAAPEVYSKRFAQALEVHHLIPIAVPVIKTIATPDTADMRTLLENDLDDIDYIAFCSR 64
Query: 58 ESLSTLPANFCRHTPIF-------------------------AIGEASACLARQ------ 86
++ +L A F + + + +
Sbjct: 65 CAVDSLSAALKHRYGCFEELVSGRASSAPAEDEGKRATIVATVLAKCTLIAIGKDADYVL 124
Query: 87 ---KGFTQIFHGKDNSINLAKIIVEQKVLFTPQ-----KPLIYLGGKPRNFHFEDYLIEH 138
+ I + + +A + E + F + L
Sbjct: 125 ERLRILPGICPDEPSPAGIAAKLAESGRAEGRTIAVLAPCVGGFAEPDVVPRFVNQLKGM 184
Query: 139 KIPLRVIDCYYSQDIAY---PETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL 195
+ + +D Y ++ ++ + + F + S + S +
Sbjct: 185 GMRVVRVDAYVTRPVSEEAVSAAVTALTSGSVHCVAFTSASEIAVLLSRSPRCLANIDVA 244
Query: 196 CLSNNIASAIPASYKNVVTVACF-PKETSLLKLLPLR 231
C A V VA +
Sbjct: 245 CFGPYTAGFAAEHGVTVSCVAKDFSSFDGFAAAIAQH 281
>gi|167585806|ref|ZP_02378194.1| hypothetical protein BuboB_10748 [Burkholderia ubonensis Bu]
Length = 108
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSES 59
V+TRP ++ ++ G + PL + A Y + S +
Sbjct: 11 VLTRPDGQSAGLAAQLADAGCDVLDFPLIDIAPLDDPAPLAAAFAALADYALVIFVSPNA 70
Query: 60 LSTLPANFCRHTP 72
+ A + P
Sbjct: 71 IDRALAQYGAIWP 83
>gi|331694957|ref|YP_004331196.1| uroporphyrinogen III synthase HEM4 [Pseudonocardia dioxanivorans
CB1190]
gi|326949646|gb|AEA23343.1| Uroporphyrinogen III synthase HEM4 [Pseudonocardia dioxanivorans
CB1190]
Length = 396
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/233 (6%), Positives = 48/233 (20%), Gaps = 31/233 (13%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAITSSE 58
+T ++A +++ G + P + + L + T+
Sbjct: 25 VT-AARRADELATMLERRGAVVQHGPALRIVPLADDAQLLESTRALIARPPDVTVATTGI 83
Query: 59 SLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + S + A+++
Sbjct: 84 GFRGWIEAAEGWGLGDDLITVLGKGTVLARGPKARGAIRASGLVDAWSPESESSAEVLDH 143
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI----AYPETTMKNLL 164
+ + + L + + Y T L
Sbjct: 144 LLASGVDGQRIAVQLHGEPLPDMVEALAMAGAEVVQVPVYRWLPPADVGPLDRLTDAVLT 203
Query: 165 QNADAILFYARSSVLYFFSLPLPAKIS----------AAFLCLSNNIASAIPA 207
D + F + + + + +C+ A+ +
Sbjct: 204 GGVDVLTFTSAPAAASLLARAGKRGLRDALLAALRGPVLAMCVGPVTAAPLQD 256
>gi|167949215|ref|ZP_02536289.1| hypothetical protein Epers_23036 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 81
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH----DRESVFLAMQQSYGAIAITSSE 58
+++TR +A I+ G V P LA+ Q + S
Sbjct: 16 VLVTRAAHQAAPLCRAIEAHGGRVVRFPALAVEPAGGTAELRASLAVLQQGALLVFVSPN 75
Query: 59 SLSTL 63
++
Sbjct: 76 AVGVW 80
>gi|328945753|gb|EGG39904.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK1087]
Length = 484
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/230 (8%), Positives = 55/230 (23%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+I +++ R ++ G P + + + L + + +S
Sbjct: 258 KILI----QQSETGRLPRLLKDAGAALTTFPARDLV-EELDLQLPDLEQVDGLLFADMQS 312
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A + + + Q+ L
Sbjct: 313 WPLFLKALRKAGKDLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAAL 369
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
GG E L + S +A+ + + ++ +
Sbjct: 370 EKEGGNWYILTAEHKKASL-AELYSLPIIASHRLAFDSQINSANWSEIEVVCLPNSAAAM 428
Query: 180 YFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S+L
Sbjct: 429 NFVAASQEAGFDWTDVPIVVMGASTRAVLEEAGFSEIVETDEATIASILD 478
>gi|332363277|gb|EGJ41062.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK49]
Length = 479
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 57/230 (24%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+I +++ R ++ G P + + + L + + + +S
Sbjct: 253 KILI----QQSETGRLPRLLKDAGAALTTFPARDLV-EELELPLPDLEQVDGLLFSDMQS 307
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A + + + Q+ L
Sbjct: 308 WPLFLKALRKAGKDLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAAL 364
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
GG E L + S +A+ + + + ++ +
Sbjct: 365 EKEGGNWYILTAEHKKASL-AELYSLPIIASHRLAFDSQISSDNWSEIEVVCLPNSAAAM 423
Query: 180 YFFSLPLPAKISAA---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S++
Sbjct: 424 NFVAASQEAGFDWKDAPIVVMGASTRAVLEEAGFSKIVETDEATIASIID 473
>gi|115526214|ref|YP_783125.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
BisA53]
gi|115520161|gb|ABJ08145.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
BisA53]
Length = 276
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/265 (8%), Positives = 58/265 (21%), Gaps = 43/265 (16%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIA 53
I+I TR + + + G + P+ + ++ + + +
Sbjct: 9 RILILETREEAQ---FSRLLTEQGAKVLQCPMFSIQDAPDPGPVDGWIRRSIARPFDDLV 65
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+T+ E L L R + A R + A E
Sbjct: 66 LTTGEGLRRLVKAAARIDMAEPLIAAVGRSRRFARGPKPGRALREIGLQADHTTEFPTSE 125
Query: 114 TPQKPLIYL-----------GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
L + + + + Y A +
Sbjct: 126 GIAAMLAGYDLTGRRVGLQLYPDKDHSALIAAIEARGASVDPVLPYVYDARAAESNVVTA 185
Query: 163 L----LQNADAILFYARSSVLYFFSLPLPAKIS---------AAFLCLSNNIASAIPASY 209
+ DA+ + + F + + + ++ + +
Sbjct: 186 IEAMAKGEVDALALTSSGQLRRLFDVARAHRCEEKLRAALDATLIASVGPVVSEELTSYG 245
Query: 210 KNVVTVACFPKETS-----LLKLLP 229
P + L+ +
Sbjct: 246 LRTDIT---PDNNAYFMKPLISAIA 267
>gi|57167963|ref|ZP_00367102.1| uroporphyrinogen-III synthase [Campylobacter coli RM2228]
gi|305431886|ref|ZP_07401053.1| uroporphyrinogen-III synthase [Campylobacter coli JV20]
gi|57020337|gb|EAL57006.1| uroporphyrinogen-III synthase [Campylobacter coli RM2228]
gi|304444970|gb|EFM37616.1| uroporphyrinogen-III synthase [Campylobacter coli JV20]
Length = 209
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 14/186 (7%)
Query: 45 MQQSYGAIAITSSESLSTLPAN---FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSIN 101
+ A+ TS +L L ++A+G+ +A A+ GF ++ +
Sbjct: 30 NLDEFDALLCTSKNALKALKKTKNSLNLDINVYAVGQNTAQFAKDMGFKKVQFAPKSY-- 87
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
+ + +YL + L + + L+ I Y + K
Sbjct: 88 -GSELFNHFKEELKNQKCLYLRAENIASTLNLDLRTYGVDLQDIIVYKNVFKKS-----K 141
Query: 162 NLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ + +F + SV FF K + + + A + + + ++
Sbjct: 142 QTILHPAIFIFTSPLSVENFFKQYDLKKED-KVIAIGQSTAKKLTHL--DNLFISSKQDL 198
Query: 222 TSLLKL 227
+KL
Sbjct: 199 KECVKL 204
>gi|325696910|gb|EGD38797.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK160]
Length = 479
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/217 (7%), Positives = 50/217 (23%), Gaps = 8/217 (3%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTP 72
R ++ G P + + + L + + +S +
Sbjct: 262 GRLPRLLRDAGAALTTFPARDLV-EELDLQLPDLEQVDGLLFADMQSWPLFLKALRKAGK 320
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
A + + + Q+ L GG E
Sbjct: 321 DLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAALEKEGGNWYILTAE 377
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA 192
L + S +A+ + + + ++ + F + A
Sbjct: 378 HKKASL-AELYSLPIIASHRLAFDSQISSDNWSEIEVVCLPNSAAAMNFVAASQEAGFDW 436
Query: 193 A---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + + + + + + + S++
Sbjct: 437 KEVPIVVMGASTRAVLEEAGFSKIVETDEATIASIID 473
>gi|295094642|emb|CBK83733.1| uroporphyrin-III C-methyltransferase [Coprococcus sp. ART55/1]
Length = 530
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 58/262 (22%), Gaps = 52/262 (19%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSESLSTLPANFC 68
+ + I +G + E + L + Y +A TS +++
Sbjct: 265 EKMRVAIDALGGQSYSIVDMSVEQTEEKNRLRMALEHIEDYSWLAFTSQNTITLFFKWLR 324
Query: 69 RHTPIFAIGEASA----------CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
L + + + LA + +
Sbjct: 325 EWNIDVRKLAHLKLAVVGAGTRDALKVEGYIADYVPDEYTTSALAMGLANVMN---DGEK 381
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
L+ + D L + + I Y L++ D I F + S V
Sbjct: 382 LLLPRAVQGSETMLDILDQGGVVYEEIPVYDVVGRRMES---IQYLKDLDVITFVSASGV 438
Query: 179 LYFFSLPLPAK--------------------------------ISAAFLCLSNNIASAIP 206
F + + + L N A+
Sbjct: 439 RGFLDVLDAEEKNCGVAHMLNDIDSCGDHTDNTDGSFKIHDIMKNIRIAALGNVTEKALE 498
Query: 207 ASYKNVVTVACFPKETSLLKLL 228
+ + V L+ +
Sbjct: 499 KAGYHADIVPEVGDIEHLISAI 520
Score = 39.0 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 10/120 (8%), Positives = 27/120 (22%), Gaps = 8/120 (6%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET--TMKNLLQNADAILFYAR 175
+ +G + I + +++ + F ++
Sbjct: 254 HVGLVGTPKLREKMRVAIDALGGQSYSIVDMSVEQTEEKNRLRMALEHIEDYSWLAFTSQ 313
Query: 176 SSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+++ FF I + A+ V ++L L
Sbjct: 314 NTITLFFKWLREWNIDVRKLAHLKLAVVGAGTRDALKVEGYIADYVPDEYTTSALAMGLA 373
>gi|294085041|ref|YP_003551801.1| uroporphyrinogen III synthase HEM4 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664616|gb|ADE39717.1| uroporphyrinogen III synthase HEM4 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 266
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 14/198 (7%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
+ TRP A+R +Q+ + MP+ + L ++ A+ TS +++
Sbjct: 10 LSTRPHTDAMRDVASLQRRAVAAMAMPVMRLVPHAH-YELPDSKTISAVIFTSRNAVACF 68
Query: 64 PANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
P+F +G A+ AR GF + G L I+
Sbjct: 69 AKTPRLETPRLAAWLDKPVFVVGTATGIAARLVGFKDVTVGHGGGSGLVPKIL--TAKLA 126
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN--ADAILF 172
+ +++ + ++F + L H I + + Y + + L++ +++
Sbjct: 127 SGRAVLWPSAQQKSFDMQTALAAHDISVIDMPVYDMVPVEIVNPAVAQHLEDGGMVSVIL 186
Query: 173 YARSSVLYFFSLPLPAKI 190
+ + F L +
Sbjct: 187 MSVRTAALFVELLKAGNL 204
>gi|86739241|ref|YP_479641.1| uroporphyrinogen-III C-methyltransferase [Frankia sp. CcI3]
gi|86566103|gb|ABD09912.1| uroporphyrinogen-III C-methyltransferase [Frankia sp. CcI3]
Length = 508
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/238 (12%), Positives = 70/238 (29%), Gaps = 12/238 (5%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL---AMQQSYGAIAITS 56
+++ TRP +++++G V ++ ++ A+ + G + +
Sbjct: 259 RVLVARTRPRPGL--LARRLRQLGADAVETVVARPAPVEDAGAALVAALPGAGGLLLADA 316
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI----IVEQKVL 112
E + + T + A+ + AR+ + S+ +A++ +
Sbjct: 317 DEVAAVVTLLRRAGTDVRALAGLTLVAAREDAAEALDGLGLASVPVAELSTDPLSADPSS 376
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-NADAIL 171
P P G + LR + + L + D +
Sbjct: 377 TGPAGPAGPTGSSRVLIAGAADPPDAVCSLRRVPLLTDVTAEPDPRIAEELRHGDFDVAV 436
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
F + ++ + P + A A A+ V V P L +
Sbjct: 437 FASSTAARGTAEIYGPLPPDLLIAAMGRRSALACAAAGMRVDIVPTEPGVHPLAAAVA 494
>gi|262203383|ref|YP_003274591.1| uroporphyrinogen III synthase HEM4 [Gordonia bronchialis DSM 43247]
gi|262086730|gb|ACY22698.1| Uroporphyrinogen III synthase HEM4 [Gordonia bronchialis DSM 43247]
Length = 377
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 59/249 (23%), Gaps = 40/249 (16%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
I +T ++A + + G + P + + L + + E +
Sbjct: 9 IGVT-AARRADEFAALLVRRGAQVMHAPTIRILPLLDDTELERVTT--ELIADPPEIMVA 65
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA------------------- 103
R A G +A + A
Sbjct: 66 TTGIGFRGWVEAADGWGNAEDVLAALGKSRLIARGPKAKGAIRAAGLREEWSPESESSSE 125
Query: 104 ---KIIVEQKVLFTPQKPLIYLGGKPRN-FHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
+++ E L + F L + I Y ++
Sbjct: 126 VLDRLLAEGVDGVRIAVQLHGATSEWEPLPDFCTVLRAAGAQVVPIPVYRWNMHPDVDSI 185
Query: 160 MKNLLQ----NADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAI 205
K ++ + DA+ F + + + + +C+ + AS +
Sbjct: 186 DKMIMAVVRGDLDALTFTSAPAAAAILTRAKQLGKLQQFIHALRTAVPVMCVGSVTASPL 245
Query: 206 PASYKNVVT 214
A +
Sbjct: 246 EALQIPTIY 254
>gi|299131862|ref|ZP_07025057.1| Uroporphyrinogen III synthase HEM4 [Afipia sp. 1NLS2]
gi|298591999|gb|EFI52199.1| Uroporphyrinogen III synthase HEM4 [Afipia sp. 1NLS2]
Length = 278
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/267 (10%), Positives = 65/267 (24%), Gaps = 43/267 (16%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE------SVFLAMQQSYGAIA 53
I+I TR + ++ G + P+ + + + + +
Sbjct: 9 RILILETREEAQ---FSRLLRDQGADVLQCPMFTIEDTPDQDAVGGWIKNTIHEPLDDLV 65
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK--- 110
+ + E + L A R A A + + + A+++VE
Sbjct: 66 LMTGEGVRRLVAAAKRIGLENEFIAALARPRKYARGPKPVNALRQIGLTAEMVVEPPTTE 125
Query: 111 --------VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET---- 158
+ + L + + + E ++ Y A
Sbjct: 126 GIIATLSKAELKGHRVGLQLYPEKDHSPLLAAVREAGATPVPVEPYVYDARAAQPNIAAA 185
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAK---------ISAAFLCLSNNIASAIPASY 209
+ DAI + V + +++ + A
Sbjct: 186 IGEIAAGRVDAIALTSSGQVRRLVEAARAEGSEEQLRLGLAQTPVASIGPVVSNELKAYG 245
Query: 210 KNVVTVACFPKETS-----LLKLLPLR 231
P + L++ + R
Sbjct: 246 LQTDI---SPANGAYFMKPLIQAITAR 269
>gi|328951376|ref|YP_004368711.1| Uroporphyrinogen III synthase HEM4 [Marinithermus hydrothermalis
DSM 14884]
gi|328451700|gb|AEB12601.1| Uroporphyrinogen III synthase HEM4 [Marinithermus hydrothermalis
DSM 14884]
Length = 275
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/257 (9%), Positives = 61/257 (23%), Gaps = 29/257 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPL-----SYFIHDRESVFLAMQQSYGAIAITS 56
+ +T P +A ++K+G P++ P + +++ + +T+
Sbjct: 8 RVALTGPR-RAAELARIVEKLGGTPLVRPTQGTAFLDPARLEPLLARLVREGVDWVLLTT 66
Query: 57 SESLSTLP----------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
L A + K A +
Sbjct: 67 GMGTEALARAAAAVGLGEAFLDLLARARLAARGYKTVKALKALGLWPAVVAADGTTAGLR 126
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPL-RVIDCYYSQDIAYPETTMKNLLQ 165
+ + +L+ + V + T+ +
Sbjct: 127 RALAAQAFEGRRVALQLFGVPAPGLAGWLVARGARVVEVWPYRHLPPDPAVVETLAREVL 186
Query: 166 N--ADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVV 213
DA+ F + V +FF + + A+ + V
Sbjct: 187 EGAVDAVAFTSAVQVHHFFEGVRALGRLGPVLEAFSGPVVAVSVGRVTREALTEAGVTRV 246
Query: 214 TVACFPKETSLLKLLPL 230
+ + +++ L
Sbjct: 247 VMPEEERMGAMIMALAR 263
>gi|291300211|ref|YP_003511489.1| Uroporphyrinogen III synthase HEM4 [Stackebrandtia nassauensis DSM
44728]
gi|290569431|gb|ADD42396.1| Uroporphyrinogen III synthase HEM4 [Stackebrandtia nassauensis DSM
44728]
Length = 368
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/246 (8%), Positives = 55/246 (22%), Gaps = 38/246 (15%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITS 56
+ +T ++ + + G V+ P+ + + L T+
Sbjct: 10 VAVT-AQRRGEELAALLGRRGAKTVLAPVLRMVSLPDDQALRAATVELINDPPDVTIATT 68
Query: 57 SESLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
A ++ G + R G + + +
Sbjct: 69 GIGFRGWLAAAEGWGLGEALHAALGSGRVWCRGPKALGAVRAAGLREEWSAPSECGW--E 126
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN-- 162
+ + + + + F D + I Y +
Sbjct: 127 VSERLRGEPLSGQRVAVQLHGDPSDDFTDTIRSGGGHAVPIPVYRWMLPTDITPVRRLVD 186
Query: 163 --LLQNADAILFYARSSVLYFFSLPLPAKISAA-------------FLCLSNNIASAIPA 207
L+ DA+ F + +V + + + A+ +
Sbjct: 187 QVCLRRIDAVTFTSAPAVNALLRIAGDQRTELLAALRAPADDGGVMAAVVGPVTAAPLTR 246
Query: 208 SYKNVV 213
VV
Sbjct: 247 DEVPVV 252
>gi|163814460|ref|ZP_02205849.1| hypothetical protein COPEUT_00611 [Coprococcus eutactus ATCC 27759]
gi|158450095|gb|EDP27090.1| hypothetical protein COPEUT_00611 [Coprococcus eutactus ATCC 27759]
Length = 527
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 65/261 (24%), Gaps = 50/261 (19%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRES----VFLAMQQSYGAIAITSSESLSTLPANFC 68
+ + I +G + E V L + Y +A TS +++
Sbjct: 265 EKMRVAIDALGGQSYSIVDMSVEQTEEKDRLRVALEHIEDYSWLAFTSQNTITLFFKWLR 324
Query: 69 RHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+G + R +G+ + + + + + + + + L
Sbjct: 325 EWNIDVRKLVHLKFAVVGAGTRDALRSEGYIADYVPDEYTTSALAMGLANVMNDG--EKL 382
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + D L + + I Y L++ D I F + S V
Sbjct: 383 LLPRAVQGSETMLDILDKGGVTYEEIPVYDVVGRRMES---IQYLKDLDVITFVSASGVR 439
Query: 180 YFFSLPLPAK--------------------------------ISAAFLCLSNNIASAIPA 207
F + K + L N A+
Sbjct: 440 GFLKVLDAEKNGSGMDHMPNDVDSCREHTNNTESTLKIHDIMKNIRIAALGNVTEKALEK 499
Query: 208 SYKNVVTVACFPKETSLLKLL 228
+ + V L+ +
Sbjct: 500 AGYHADIVPEVGDIEHLISSI 520
Score = 40.6 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 11/120 (9%), Positives = 30/120 (25%), Gaps = 8/120 (6%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET--TMKNLLQNADAILFYAR 175
+ +G + I + + +++ + F ++
Sbjct: 254 HVGLVGTPKLREKMRVAIDALGGQSYSIVDMSVEQTEEKDRLRVALEHIEDYSWLAFTSQ 313
Query: 176 SSVLYFFSLPLPAKISA------AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+++ FF I F + A+ + V ++L L
Sbjct: 314 NTITLFFKWLREWNIDVRKLVHLKFAVVGAGTRDALRSEGYIADYVPDEYTTSALAMGLA 373
>gi|154148396|ref|YP_001407018.1| uroporphyrinogen-III synthase [Campylobacter hominis ATCC BAA-381]
gi|153804405|gb|ABS51412.1| uroporphyrinogen-III synthase [Campylobacter hominis ATCC BAA-381]
Length = 211
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 49/168 (29%), Gaps = 5/168 (2%)
Query: 42 FLAMQQSYGAIAITSSESLSTL-PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI 100
++++Y AI TS ++ L K F +
Sbjct: 27 IFNIEKNYDAIIFTSKNAVKALEYNQIMPSLKTDIYTIGIPTFKAAKNFGFENIYIGRAG 86
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
E L +K ++YL K L + L I+ Y ++ + +
Sbjct: 87 TGNAFACEISHLLVRKKRVLYLKAKKTVSKLNLILERDGVRLDCIEAYENKFVKVD---V 143
Query: 161 KNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
++ ++F + +V F S + + A ++
Sbjct: 144 SLKPPSSAVLIFTSPFNVECFVKNFG-WDESWRAVAIGKTTAQSLEKY 190
>gi|15920399|ref|NP_376068.1| hypothetical protein ST0218 [Sulfolobus tokodaii str. 7]
gi|15621181|dbj|BAB65177.1| 211aa long hypothetical protein [Sulfolobus tokodaii str. 7]
Length = 211
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 58/231 (25%), Gaps = 29/231 (12%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ RP + + + + + +V + TS ++
Sbjct: 1 MKVLFLRPEGSNIPYNKNF-------IEISILKPECINYTV---NLHEIDGLGFTSINAV 50
Query: 61 STLPANFCRHTPIF--AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
S L ++ I + NL K+I + +
Sbjct: 51 RCFKDFDKIEGKAIFAVGPSTSEELIKRNIKNVIIPEEYTVENLVKLIKQNTKNPLLVRS 110
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
LI + DY ++ + E + I+ +
Sbjct: 111 LIAIDNSLDIKQIADYNLKADLQ------------KLEEARELIEKCKVNIIVLTSSYIA 158
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+I + + + + I K + A +LKLL
Sbjct: 159 SLVKDFIKECEI---IVSIGPSTSKVIKD--KKNIYEAKEHDMKGILKLLK 204
>gi|258593765|emb|CBE70106.1| Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase [NC10
bacterium 'Dutch sediment']
Length = 646
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 52/252 (20%), Gaps = 32/252 (12%)
Query: 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY------GAIAITSSESLSTL-- 63
A + I + G IPV P I E + + L
Sbjct: 25 AAPMADLISRQGGIPVSAPALREIPCTEHAEANEFAKALLAGRIDMVVWLTGVGARALLT 84
Query: 64 ----------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
P A+G + R+ G + + +
Sbjct: 85 AVEGTVSRAECLAALSRIPTIALGPKPQAVLRELGIPITLAVPEPNTWREILTAIDSAAI 144
Query: 114 TP-QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL----QNAD 168
+ + N L + + Y + + Q D
Sbjct: 145 PLLGRRVAVQEYGRSNPELIAGLQTRGASVLRVPVYQWALPEDCGPLRQAIKAIANQQVD 204
Query: 169 AILFYARSSVLYFFSLPLPAKI---------SAAFLCLSNNIASAIPASYKNVVTVACFP 219
+LF + + + + + A+ V P
Sbjct: 205 LVLFTTAVQADHLLQVAAADGLEEPLRTGLRDTVVASIGPTCSKALREHGLTVDLEPEHP 264
Query: 220 KETSLLKLLPLR 231
K L++
Sbjct: 265 KMGHLVQTAARH 276
>gi|332363827|gb|EGJ41606.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK355]
Length = 479
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 56/230 (24%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+I +++ R ++ G P + + + L + + +S
Sbjct: 253 KILI----QQSETGRLPRLLRDAGAALTTFPARDLV-EELDLQLPDLEQVEGLLFADMQS 307
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A + + + Q+ L
Sbjct: 308 WPLFLKALRKAGKDLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAAL 364
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
GG E L + S +A+ + + + ++ +
Sbjct: 365 EKEGGNWYILTAEHKKASL-AELYSLPIIASHRLAFDSQISSDNWSEIEVVCLPNSAAAM 423
Query: 180 YFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S++
Sbjct: 424 NFVAASQEAGFDWTDVPIVVMGASTRAVLEEAGFSNIVETDEATIASIID 473
>gi|313887224|ref|ZP_07820919.1| uroporphyrinogen-III synthase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923315|gb|EFR34129.1| uroporphyrinogen-III synthase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 251
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 46/194 (23%), Gaps = 16/194 (8%)
Query: 32 SYFIHDRESVFL---AMQQSYGAIAITSSESLSTLPANFCRH-------TPIFAIGEASA 81
F Y AI TS ++ + E SA
Sbjct: 39 IRVETVATKEFRQQRINPLDYTAIIFTSRTAILHFFTLMKEMRITMPDTMKYYCSSEKSA 98
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
++ + + + +V+ V +K L+ + + + L E I
Sbjct: 99 PYLQKFVNYRKRKVFFSPTGRTEDLVKVIVKHKGEKYLLPVAEEHNAKLSDL-LTEAGID 157
Query: 142 LRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLC-LSNN 200
Y + D I+F++ + F K + +
Sbjct: 158 YTKSVMYRTIPRELE----LEKPLPYDMIIFFSPVGITSLFENVPDFKQEEMIIATVGPK 213
Query: 201 IASAIPASYKNVVT 214
A V
Sbjct: 214 TAQRAEELGLRVDI 227
>gi|332299746|ref|YP_004441667.1| Uroporphyrinogen III synthase HEM4 [Porphyromonas asaccharolytica
DSM 20707]
gi|332176809|gb|AEE12499.1| Uroporphyrinogen III synthase HEM4 [Porphyromonas asaccharolytica
DSM 20707]
Length = 249
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 46/194 (23%), Gaps = 16/194 (8%)
Query: 32 SYFIHDRESVFL---AMQQSYGAIAITSSESLSTLPANFCRH-------TPIFAIGEASA 81
F Y AI TS ++ + E SA
Sbjct: 37 IRVETVATKEFRQQRINPLDYTAIIFTSRTAILHFFTLMKEMRITMPDTMKYYCSSEKSA 96
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
++ + + + +V+ V +K L+ + + + L E +
Sbjct: 97 PYLQKFVNYRKRKVFFSPTGRTEDLVKVIVKHKGEKYLLPVAEEHSAKLSDL-LTEAGVD 155
Query: 142 LRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLC-LSNN 200
Y + D I+F++ + F K + +
Sbjct: 156 YTKSVMYRTIPRELE----LEKPLPYDMIIFFSPVGITSLFENVPDFKQEEMIIATVGPK 211
Query: 201 IASAIPASYKNVVT 214
A V
Sbjct: 212 TAQRAEELGLRVDI 225
>gi|303257760|ref|ZP_07343772.1| uroporphyrinogen-III synthase [Burkholderiales bacterium 1_1_47]
gi|331001197|ref|ZP_08324824.1| uroporphyrinogen-III synthase [Parasutterella excrementihominis YIT
11859]
gi|302859730|gb|EFL82809.1| uroporphyrinogen-III synthase [Burkholderiales bacterium 1_1_47]
gi|329569129|gb|EGG50921.1| uroporphyrinogen-III synthase [Parasutterella excrementihominis YIT
11859]
Length = 249
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/230 (12%), Positives = 64/230 (27%), Gaps = 17/230 (7%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE-----SVFLAMQQSYGAIAI 54
M I+ +P R QE+++ V P F + L + + +
Sbjct: 1 MRTILNMKPGPGGQRLQEELEAKTAGSVYWPAFTFDRSEDYEESVKEILEGAERGALLIL 60
Query: 55 TSSESLSTL---PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA---KIIVE 108
S ++S + +GE +A + +L +++ E
Sbjct: 61 VSPTTVSFMKDIFPQLPESARFACVGEPTAKALTAAFPAAHEILFPHGSSLESGSELLFE 120
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL-LQNA 167
+ ++ + G D L + +P+ V Y + + + A
Sbjct: 121 LLLEEGLPPEVVLIRGDTGRQFLIDVLRDKGVPVTVAPIYKRIPLKASGDQKRWIGRGEA 180
Query: 168 DAILFYARSSVLYFFSLPLP----AKISAAFLCLSNNIASAIPASYKNVV 213
+ + ++ SA L + I + V
Sbjct: 181 PVVYLTSTDAIRTLEENVGGDNAGWLKSALVLTIHPRIQEHLFEEGFKNV 230
>gi|326430551|gb|EGD76121.1| hypothetical protein PTSG_00828 [Salpingoeca sp. ATCC 50818]
Length = 284
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 71/216 (32%), Gaps = 17/216 (7%)
Query: 29 MPLSYFIHDRESV------FLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASAC 82
+P+ H + L I ITSS +++ + +
Sbjct: 63 VPVLQVEHTKGEAVDRQLLELLHTLPNAGIIITSSNAITAATSALSPAARQLIKDKPGFF 122
Query: 83 LARQKGFTQIFHGKDNSINLA---KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHK 139
+ + + +A K + E+ V P I+L G P L H
Sbjct: 123 VGDKTATAAAHALQLKVAIVANKAKELGERLVSEVPCSSYIFLCGDPHRPELPTLLQAHS 182
Query: 140 IPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSVLYFFSLPLPAKISAAF--- 194
IPL + CY S T ++ LLQ+ ++ ++ S +L ++A
Sbjct: 183 IPLHEVVCYSSVIKDEAITHVQQLLQDCPSPILVIFSPSVARRVNALLSTDAANSALARM 242
Query: 195 LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ + A+ I + V VA P + L L
Sbjct: 243 VTIGPTTAAEITRA---PVFVAEKPTPAHVAHALEL 275
>gi|323353356|ref|ZP_08087889.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis VMC66]
gi|322121302|gb|EFX93065.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis VMC66]
Length = 479
Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/230 (7%), Positives = 55/230 (23%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+I +++ R ++ G P + + + L + + +S
Sbjct: 253 KILI----QQSETGRLPRLLKDAGAALTTFPARDLV-EELELPLPDLEQVDGLLFADMQS 307
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A + + + Q+ L
Sbjct: 308 WPLFLKALRKAGKDLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDRDFAAAL 364
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
GG E L + S + + + + + ++ +
Sbjct: 365 EKEGGNWYILTAEHKKASL-AELYSLPIIASHRLTFDSQINSDNWSEIEVVCLPNSAAAM 423
Query: 180 YFFSLPLPAKISAA---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S++
Sbjct: 424 NFVAASQEAGYDWKDVPIVVMGASTRAVLAEAGFSKIVETDEATIASIVD 473
>gi|167462016|ref|ZP_02327105.1| uroporphyrinogen III synthase/methyltransferase [Paenibacillus
larvae subsp. larvae BRL-230010]
Length = 105
Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 6/93 (6%)
Query: 140 IPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLP----LPAKISAAFL 195
+ Y+ + + + + + D + F + S+V S+ S L
Sbjct: 5 PEYKENIVYFCGNCTFFHSAIAGSRNSYDFVCFSSSSTVDNLLSVLSREEKALLRSLKLL 64
Query: 196 CLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + I V A P +L+ LL
Sbjct: 65 SIGPMTSRTIREKGFEVYREAALP--EALIDLL 95
>gi|149278622|ref|ZP_01884758.1| porphobilinogen deaminase [Pedobacter sp. BAL39]
gi|149230617|gb|EDM36000.1| porphobilinogen deaminase [Pedobacter sp. BAL39]
Length = 526
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 54/227 (23%), Gaps = 11/227 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+ I+R I + ++ ++K L + + I +S S+
Sbjct: 303 KVFISREIGEHSYFRKALEKNNIEIEGRSLIRTFPIVNVLDPFYLKHIDWIFFSSRNSVE 362
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
G A + E K +++
Sbjct: 363 YFFNLKPVLPKNVKFGVAGRGSEDSLRKAGHLADYVGEGGDIDEVAEVFADLVAGKTVLF 422
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY- 180
+ ++ + + Y + + T +L +F + S+V
Sbjct: 423 PRAQDSL-LSIQKALKPDTKVVDLPIYETVIEEDVDQTYAEVL------IFTSPSNVDAY 475
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
F L + + N+ P E L +
Sbjct: 476 FVENLLEPGQQ--VIAIGNSTGKKFEEMGVK-FIQPYSPDEIGLAEA 519
>gi|149240115|ref|XP_001525933.1| hypothetical protein LELG_02491 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450056|gb|EDK44312.1| hypothetical protein LELG_02491 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 283
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 23/95 (24%), Gaps = 7/95 (7%)
Query: 141 PLRVIDCYYSQDIAYPETTMKN---LLQNADAILFYARSS----VLYFFSLPLPAKISAA 193
Y + + + + ++FY+ V + K
Sbjct: 180 QFEEFVMYKTMERDDIIDKFQELHAEMNGQGWVIFYSPQGTRDIVKHLKQNIREGKKYWK 239
Query: 194 FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ + A+ VA P SL +
Sbjct: 240 LGVIGPTTEEYLIANDLKPDVVAQRPDAESLCSAM 274
>gi|148256984|ref|YP_001241569.1| putative uroporphyrinogen-III synthase [Bradyrhizobium sp. BTAi1]
gi|146409157|gb|ABQ37663.1| Putative uroporphyrinogen-III synthase [Bradyrhizobium sp. BTAi1]
Length = 277
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/270 (9%), Positives = 66/270 (24%), Gaps = 45/270 (16%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIA 53
I+I TR + + + G + P+ + +++ +
Sbjct: 9 RILILETREEAQ---FSRLLAEQGADVLQCPMFTIQDAPDPAPVEAWIHRCIERPLDDLV 65
Query: 54 ITSSESLS-------------TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI 100
+ + E L A + + L +Q+ K S
Sbjct: 66 LMTGEGLRRLMTVVRRIGVEPAFIAALGKARKFTRGPKPGRALRELGLESQVTTEKPTSE 125
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+A+++ + + + L + + + + Y A +
Sbjct: 126 GVAELLARYDL--KGHRLGLQLYPDKDHSALIGAIQAEGADVDPVLPYVYDAKAADANIL 183
Query: 161 KNL----LQNADAILFYARSSVLYFFSLPLPAKI---------SAAFLCLSNNIASAIPA 207
+ DAI + F + + + + + A
Sbjct: 184 TAIDEMTAGKVDAIALTSSGQPRRLFDVAKAHGVEDRLRQGLARTQIASVGPVVTEELAA 243
Query: 208 SYKNVVTVAC------FPKETSLLKLLPLR 231
V P +++ L ++
Sbjct: 244 HGLAPSIVPAGEAYFMKPLISAMATALGVK 273
>gi|296416727|ref|XP_002838026.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633921|emb|CAZ82217.1| unnamed protein product [Tuber melanosporum]
Length = 292
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 57/233 (24%), Gaps = 34/233 (14%)
Query: 24 YIPVMMPLSYFIHDRES---------VFLAMQQSYGAIAITSSESLSTLP---------- 64
+ PV +P+ H SYG + ITS ++ L
Sbjct: 35 FKPVFIPVLKHHHINLDNLKTHLISKSDPTDPNSYGGLVITSQRTVEALSSIIPALPPTT 94
Query: 65 -ANFCRHTPIFAIGEASACLARQKGFTQIF---HGKDNSINLAKIIVEQKVLFTPQKPLI 120
+T ++ +G A+ GF N LAK+I+E +
Sbjct: 95 LQTLFANTKVWVVGPATGSALIGLGFRASNVLGQDSGNGEALAKLILESYGSRPKPLLFL 154
Query: 121 Y--LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA----DAILFYA 174
E I + + Y + + + + I+ ++
Sbjct: 155 AGETRRDIIPKTLSTAPGEKNIAVETLTVYETIVDEEFDAKFEKAIDETGGTTRWIVLFS 214
Query: 175 RSSVLYFFSLPLPAKISAA----FLCLSNNIASAI-PASYKNVVTVACFPKET 222
+ + + + + VA P
Sbjct: 215 PAGADIAVGVLTKHLTPLSHGSYLAAIGPTTEKHLVDKLSWKPDVVAEKPTPQ 267
>gi|254462462|ref|ZP_05075878.1| uroporphyrinogen-III synthase [Rhodobacterales bacterium HTCC2083]
gi|206679051|gb|EDZ43538.1| uroporphyrinogen-III synthase [Rhodobacteraceae bacterium HTCC2083]
Length = 227
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 72/237 (30%), Gaps = 37/237 (15%)
Query: 3 IVITRPIKKALRTQEKIQ-KMG-YIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+++TRP + R ++ ++G + PL + + L + + I TS +
Sbjct: 7 LLLTRPHAASQRFARQVVDQLGEIRIEISPLIDI----DLLDLNEEPNAQTIVFTSRNGV 62
Query: 61 STL-PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
A F + +GEA+A AR GF G + +V P +
Sbjct: 63 DAWSRACFTTRASCYCVGEATADAARAIGFDPKVSGGT-----VEHLVSDVQNAKPSGEI 117
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL-FYARSSV 178
+++ G+ D L + + Y + L A I+ ++ S
Sbjct: 118 LHVHGRHTRGGLVDRLRAKGFKSQSLIAYEQSLKELSTSARDLLQGGASVIVPLFSPRSA 177
Query: 179 LYFFSLPLPAKISAAF---------LCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
L F S P C IA P ++
Sbjct: 178 LQFAS-YGPFGPQVKTIAISKSAAAACPGATIA--------------PHPDAKGVIA 219
>gi|325690367|gb|EGD32371.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK115]
Length = 479
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 56/230 (24%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+I +++ R ++ G P + + + L + + +S
Sbjct: 253 KILI----QQSETGRLPRLLKDAGAALTTFPARDLV-EELELQLPDLEQVDGLLFADMQS 307
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A + + + Q+ L
Sbjct: 308 WPLFLKALRKAGKDLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAAL 364
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
GG E L + S +A+ + + + ++ +
Sbjct: 365 EKEGGNWYILTAEHKKASL-AELYSLPIIASHRLAFDSQISSDNWSEIEVVCLPNSAAAM 423
Query: 180 YFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S++
Sbjct: 424 NFVAASQEAGFDWTDVPIVVMGASTRAVLEEAGFSKIVETDEATIASIID 473
>gi|332360595|gb|EGJ38405.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK1056]
Length = 479
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 56/230 (24%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+I +++ R ++ G P + + + L + + +S
Sbjct: 253 KILI----QQSETGRLPRLLKDAGAALTTFPARDLV-EELELPLPDLEQVDGLLFADMQS 307
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A + + + Q+ L
Sbjct: 308 WPLFLKALRKAGKDLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAAL 364
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
GG E L + S +A+ + + + ++ +
Sbjct: 365 EKEGGNWYILTAEHKKASL-AELYSLPIIASHRLAFDSQISSDNWSEIEVVCLPNSAAAM 423
Query: 180 YFFSLPLPAKISA---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S++
Sbjct: 424 NFVAASQEAGFDWTDVPIVVMGASTRAVLEEAGFSKIVETDEATIASIID 473
>gi|23099113|ref|NP_692579.1| uroporphyrinogen-III synthase [Oceanobacillus iheyensis HTE831]
gi|22777341|dbj|BAC13614.1| uroporphyrinogen-III synthase [Oceanobacillus iheyensis HTE831]
Length = 268
Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/241 (10%), Positives = 70/241 (29%), Gaps = 26/241 (10%)
Query: 11 KALRTQEKIQKMGYIPVMMPL-----SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPA 65
++ ++K+G P++ + VF + ++ + +T+ STL
Sbjct: 16 RSDEIAALVKKIGGTPIVFSIQGEQILNNETSEHDVFELIDNAFDFVVLTTGIGASTLEE 75
Query: 66 NFCRHTPIF-----------AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
R + AI + ++ + + Q V+
Sbjct: 76 ASLRVSRFPEFISKLSSIPLAIRGSKTEKWLKRHSLDAKVVSTDGTMQNLLYSLQSVIGG 135
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNADAIL 171
K + + ++ L + + Y ++ QN +A++
Sbjct: 136 NSKTVFLQTYNEDDIVLKEKLENLGCNVYMSKPYRYRNPDKETIAKLESNIVEQNLEAVI 195
Query: 172 FYARSSVLYFFSLPLP-------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
F +++ V F + + + A+ + + V K ++
Sbjct: 196 FTSKTQVKNLFQMASDTALLTEAFNKHVTAVAVGKVTANQLNQYGVSRVVQPANQKMGAM 255
Query: 225 L 225
+
Sbjct: 256 V 256
>gi|218202384|gb|EEC84811.1| hypothetical protein OsI_31881 [Oryza sativa Indica Group]
Length = 301
Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 60/286 (20%), Gaps = 55/286 (19%)
Query: 2 YIVITRPIKKAL------RTQEKIQKMGYIPVMMPLSYFIHDRESVFLA-----MQQSYG 50
+ T P A R +++ G PV +P + ++
Sbjct: 13 RVAFTTPQTDAGGGGYGGRLHAILRQRGARPVPVPTIAIRAHDPDILRPFVAPGGLDAFA 72
Query: 51 AIAITSSESLSTL-------------PANFCRHTPIFAIGEASACLARQK---------- 87
A+A TS +S + +
Sbjct: 73 ALAFTSRSGISAFSRALLPSSSSSPARRPRHPVSDAATALPFTVAALGSDADLLDAAFLS 132
Query: 88 --------GFTQIFHGKDNSINLAKIIVEQKVL--FTPQKPLIYLGGKPRNFHFEDYLIE 137
+ + L + + P ++ L P F L
Sbjct: 133 RLCGDAGGRVSVLVPDVPTPAGLVEALGSGSGRRVLCPVPDVVGLREPPVVPGFLSGLEA 192
Query: 138 HKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA---- 193
Y + DA++F + + V A S
Sbjct: 193 AGWVAVRAPAYVTCWAGPRCAEALVDAAAPDAVVFTSTAEVEGLLKGLDAAGWSWPRLRA 252
Query: 194 ------FLCLSNNIASAIPASYKNVVTV-ACFPKETSLLKLLPLRR 232
A + V V A F +L L +R
Sbjct: 253 RWPRMVVAAHGPVTADGVRRLGIEVDVVGARFSSFHGVLDALAAKR 298
>gi|297627044|ref|YP_003688807.1| Uroporphyrinogen decarboxylase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922809|emb|CBL57387.1| Uroporphyrinogen decarboxylase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 632
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/238 (10%), Positives = 57/238 (23%), Gaps = 26/238 (10%)
Query: 7 RPIKKAL---RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
R + R +Q G +++ + + A + + +
Sbjct: 37 RAADDSAPAHRMTGFLQSSGAQVILL-----------ITSPRTWQHWAQQVGVAALENAA 85
Query: 64 PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI-------NLAKIIVEQKVLFTPQ 116
R +F G A+ K + + I
Sbjct: 86 VGAVDRGMRVFCTGPATRDSLPAKLAGVAQMAPNAAELARLVNGRELPRITGDPDNAGLP 145
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN-ADAILFYAR 175
+ G + L + Y + +A + + L A++ +
Sbjct: 146 PVALIPGSTIARKELPEALERAGWHVLRSAIYQTHPVARRPESAELLASGAFSAVVLRSP 205
Query: 176 SSVLYFFSLPLPAKISAAFLCL--SNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
S+V I A+ + ++A + V + + L R
Sbjct: 206 SAVQALAEFTGGTPIPASTAVITAGPTTSAAAREAGFTVQACPSAHPQE--VAALAAR 261
>gi|302524404|ref|ZP_07276746.1| uroporphyrinogen-III synthase [Streptomyces sp. AA4]
gi|302433299|gb|EFL05115.1| uroporphyrinogen-III synthase [Streptomyces sp. AA4]
Length = 375
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 53/239 (22%), Gaps = 31/239 (12%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSE 58
IT ++A + + G P + + L ++ + T+
Sbjct: 14 IT-AARRAEELGALLVRQGAAVRYGPAIRIVPLADDTELHAATMRLLESPVDIVVATTGI 72
Query: 59 SLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + S + A+++
Sbjct: 73 GFRGWIEAADGWGLGEKVLDHLSNASLLARGPKAAGAVRTAGLAEDYSPASESSAELLQY 132
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ + +F + L + + I Y A P + L +
Sbjct: 133 LSESGVDGRRIALQLHGEPLPYFAETLRQAGAEVIEIPVYRWVAPADPGPLDRLLDAVLE 192
Query: 169 AIL----FYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVV 213
+ F + + ++ C+ A + + V
Sbjct: 193 GTIDALPFTSAPAAASTVAMARRTGRLGALIEALSNRVIVACVGPIAAGPLASLGVPTV 251
>gi|213584016|ref|ZP_03365842.1| uroporphyrinogen-III synthase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 62
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 5/62 (8%)
Query: 173 YARSSVLYFFSLPLPA-----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + +SL + L +S +A + VA +LL+
Sbjct: 1 TSGEMLQRLWSLTPQWYREHWLLRCRLLVVSERLAHLARELGWQDIKVADNADNDALLRA 60
Query: 228 LP 229
L
Sbjct: 61 LQ 62
>gi|154304772|ref|XP_001552790.1| hypothetical protein BC1G_08125 [Botryotinia fuckeliana B05.10]
gi|150854025|gb|EDN29217.1| hypothetical protein BC1G_08125 [Botryotinia fuckeliana B05.10]
Length = 317
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/272 (10%), Positives = 70/272 (25%), Gaps = 62/272 (22%)
Query: 21 KMGYIPVMMPLSYFIHDRESVFLAMQ------------QSYGAIAITSSESLSTL----- 63
+ G+ P +P+ E V + + YG + TS ++
Sbjct: 41 ERGFEPTFVPVLEHRFVDEGVDEVKRLLKERGIGREEGKEYGGLIFTSQRAVELFAKLVE 100
Query: 64 ---------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKD----NSINLAKIIVEQK 110
+ ++ PI+ +G A++ R T + N LA ++E
Sbjct: 101 EGRSEDDSDEWPYLQNIPIYTVGPATSRALRSIPQTPALNIFGAESGNGEALAHYMLEHY 160
Query: 111 VLFTPQKPLIYLGGKPRNF----------HFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+ + + + +I + + Y + + E
Sbjct: 161 GNWYKNRCVKPSLLFMVGEQRRDIIPRTLMDPELSDGKRIQVDELVVYGTGVMESFEEDF 220
Query: 161 KNLL-----QNADAILFYARSSVLYFFSLPL----------------PAKISAAFLCLSN 199
K LL ++ ++ ++ + K +
Sbjct: 221 KALLKETEHRDTRWVVVFSPTGCDAMLRSLGMLDCQTGRIKRANEQEDGKRKTFIATIGP 280
Query: 200 NIASAIPA-SYKNVVTVACFPKETSLLKLLPL 230
+ + A P +++ +
Sbjct: 281 TTRDYLKSTFGYEPDVCAEKPSPEGVIEGIRK 312
>gi|324990210|gb|EGC22148.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK353]
Length = 479
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/230 (7%), Positives = 55/230 (23%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+I +++ R ++ G P + + + L + +S
Sbjct: 253 KILI----QQSETGRLPRLLKDAGAALTTFPARDLV-EELELQLPDLEQVDGFLFADMQS 307
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ + A + + + Q+ L
Sbjct: 308 WPLFLKSLRKAGRDLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAAL 364
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
GG E L + S + + + + + ++ +
Sbjct: 365 EKEGGNWYILTAEHKKASL-AELYSLPIIASHRLTFDSQINSDNWSEIEVVCLPNSAAAM 423
Query: 180 YFFSLPLPAKISAA---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S++
Sbjct: 424 NFVAASQEAGYDWKDVPIVVMGASTRAVLAEAGFSKIVETDEATIASIVD 473
>gi|332365724|gb|EGJ43482.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK1059]
Length = 479
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/217 (7%), Positives = 50/217 (23%), Gaps = 8/217 (3%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTP 72
R ++ G P + + + L + + +S +
Sbjct: 262 GRLPRLLKDAGAALTTFPARDLV-EELELPLPDLEQVDGLLFADMQSWPLFLKALRKAGK 320
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
A + + + Q+ L GG E
Sbjct: 321 DLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAATLEKEGGNWYILTAE 377
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA 192
L + S +A+ + + + ++ + F + A
Sbjct: 378 HKKASL-AELYSLPIIASHRLAFDSQISSDNWSEIEVVCLPNSAAAMNFVAASQEAGYDW 436
Query: 193 A---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + + + + + + + S++
Sbjct: 437 KDVPIVVMGASTRAVLEEAGFSKIVETDEATIASIID 473
>gi|311067718|ref|YP_003972641.1| uroporphyrinogen-III synthase [Bacillus atrophaeus 1942]
gi|310868235|gb|ADP31710.1| uroporphyrinogen-III synthase [Bacillus atrophaeus 1942]
Length = 272
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 57/242 (23%), Gaps = 35/242 (14%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTLPANF 67
I+K G +PV+ L + + + + + T+ TL
Sbjct: 19 EEISTLIKKQGGVPVVRSLQGTVFLADKQVEPDLRRFVEEQADWVIFTTGIGTETLVDLA 78
Query: 68 CRHT------------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ I G + ++ I D +I +
Sbjct: 79 EKIGVKEPFLTTLRGAKIACRGYKTFATLKKMD--MIPAAVDEDGTTGGLIRSLEAYGFS 136
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY---PETTMKNLLQNADAILF 172
K ++ + +L E + I Y + + + DA+ F
Sbjct: 137 GKRVMVQLHGEKAPSLMTFLKEKGASVLPILPYRHIPPEPETVDLLCRELMDRKLDAVCF 196
Query: 173 YARSSVLYFFSLPLP----------AKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
V F K + A A+ + + P
Sbjct: 197 TTAVQVRSLFDFAREKGCINQIKDAFKEDVLASAVGKVTAEALREEGISRLL---APDIE 253
Query: 223 SL 224
+
Sbjct: 254 RM 255
>gi|327540526|gb|EGF27106.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Rhodopirellula baltica WH47]
Length = 673
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/247 (8%), Positives = 51/247 (20%), Gaps = 31/247 (12%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ------SYGAIAITSSESLSTLP 64
+A I K G + P + + G + + + L
Sbjct: 20 RADDMTRLICKFGGEAFVSPSMREVPIEPNRAAIDFAYRIITGDIGIVIVMTGVGFRYLL 79
Query: 65 ANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+H G + R+ G + + + +
Sbjct: 80 KATEKHVDQQRLIDALSDITTICRGPKPVAVMREFGLKPTHRVPEPNTWRELLQTIDAGI 139
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----PETTMKNLLQNAD 168
+ + N L + Y + T+ D
Sbjct: 140 PIANQTIGIQEYGVSNKQLIAGLEARGAIAESVKVYGWEFPEDTQPLKANTLALAEGERD 199
Query: 169 AILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+L + V+ + A + + + + + P
Sbjct: 200 ILLVTSAHQVVNLLRMAEDLGVSDSLRDGLSKTAIVSIGPTTSDMLREHDLAIAMEPSHP 259
Query: 220 KETSLLK 226
K L+
Sbjct: 260 KMGHLVS 266
>gi|32475041|ref|NP_868035.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Rhodopirellula baltica SH 1]
gi|32445581|emb|CAD75582.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Rhodopirellula baltica SH 1]
Length = 673
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/247 (8%), Positives = 51/247 (20%), Gaps = 31/247 (12%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ------SYGAIAITSSESLSTLP 64
+A I K G + P + + G + + + L
Sbjct: 20 RADDMTRLICKFGGEAFVSPSMREVPIEPNRAAIDFAYRIITGDIGIVIVMTGVGFRYLL 79
Query: 65 ANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+H G + R+ G + + + +
Sbjct: 80 KATEKHVDQQRLIDALSDITTICRGPKPVAVMREFGLKPTHRVPEPNTWRELLQTIDAGI 139
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----PETTMKNLLQNAD 168
+ + N L + Y + T+ D
Sbjct: 140 PIANQTIGIQEYGVSNKQLIAGLEARGAIAESVKVYGWEFPEDTQPLKANTLALAEGERD 199
Query: 169 AILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+L + V+ + A + + + + + P
Sbjct: 200 ILLVTSAHQVVNLLRMAEDLGVSDSLRDGLSKTAIVSIGPTTSDMLREHDLAIAMEPSHP 259
Query: 220 KETSLLK 226
K L+
Sbjct: 260 KMGHLVS 266
>gi|255565081|ref|XP_002523533.1| conserved hypothetical protein [Ricinus communis]
gi|223537240|gb|EEF38872.1| conserved hypothetical protein [Ricinus communis]
Length = 295
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/269 (11%), Positives = 57/269 (21%), Gaps = 40/269 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV-------FLAMQQSYGAIAIT 55
+ T P A R + P+ P +++ AI
Sbjct: 18 VAFTTPQNYASRLSHLLTLKSLTPLWCPTIITQPTPQTLSSLALHLAPHSISPISAILFP 77
Query: 56 SSESLSTLPANFC----------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
S +++ C I A L I + L
Sbjct: 78 SRTAITAFSKAICSLATPLLHPSHDAMIIGALGKDAELIDSAFLLNICSSINRIRALVPQ 137
Query: 106 IVEQKVLFTPQK------------PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
L ++ L P F L +D Y ++ +
Sbjct: 138 TATPSGLVQSLGAGGGRRVLCLVPKIVGLKEPPVVPDFLRELEAAGWVPIRVDAYETRWL 197
Query: 154 AYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAA----------FLCLSNNIAS 203
+ D ++F + + V + A+
Sbjct: 198 GPTCAEGIVKEEGLDGVVFTSSAEVEGLLKSLSEYRWDWKMVKQRWPELVVAAHGPVTAA 257
Query: 204 AIPASYKNVVTVACF-PKETSLLKLLPLR 231
+V V+ ++ L R
Sbjct: 258 GAERLGVDVDVVSDRFSSFEGVVDALYSR 286
>gi|228470802|ref|ZP_04055650.1| uroporphyrinogen-III synthase [Porphyromonas uenonis 60-3]
gi|228307475|gb|EEK16480.1| uroporphyrinogen-III synthase [Porphyromonas uenonis 60-3]
Length = 251
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/194 (10%), Positives = 42/194 (21%), Gaps = 16/194 (8%)
Query: 32 SYFIHDRESVFL---AMQQSYGAIAITSSESLSTLPANFCRH-------TPIFAIGEASA 81
F Y AI TS ++ + E SA
Sbjct: 39 IRVETVAAKEFRQQRINPLDYTAIIFTSRTAILHFFTLMKEMRISVPDTMKYYCSSEMSA 98
Query: 82 CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIP 141
++ + + + +V+ + + + + D L E I
Sbjct: 99 PYLQKFVNYRKRKVFFSPTGRTEDLVKVITKHKS-EKYLLPVAEEHSDKLSDLLTEAGID 157
Query: 142 LRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA-KISAAFLCLSNN 200
Y + D I+F++ + F + +
Sbjct: 158 YTKSVMYRTIPRELE----LEKPLPYDMIIFFSPIGITSLFENVPDFKQEDMIIATVGPK 213
Query: 201 IASAIPASYKNVVT 214
A V
Sbjct: 214 TALRAEELGLRVDI 227
>gi|53711355|ref|YP_097347.1| hypothetical protein BF0064 [Bacteroides fragilis YCH46]
gi|52214220|dbj|BAD46813.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 165
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 47/161 (29%), Gaps = 6/161 (3%)
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
F + EA A ++ + + + ++ V + + N
Sbjct: 1 MKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLIPSIVK-HKTEKYLVPMSDVHNDD 59
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLP-AK 189
D L ++ I Y + M+ + D ++F++ + V +
Sbjct: 60 VRDLLDKNNIQHTECVMYRTV----SNDFMEGEEFDYDMLVFFSPAGVSSLKKNFPDFDQ 115
Query: 190 ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ A A+ + + A K S+ L L
Sbjct: 116 KDIKIGTFGSTTAQAVRDAGLRLDLEAPNVKAPSMTAALDL 156
>gi|297180546|gb|ADI16758.1| hypothetical protein [uncultured gamma proteobacterium
HF0010_11B23]
Length = 217
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 60/208 (28%), Gaps = 14/208 (6%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M ++ T+P A V +PL ++ + +Y I S ++
Sbjct: 1 MKVIDTKPFITAHE-CN-------EIVNVPLYKICKVKQ---IVNLSNYQNIIFQSPSAV 49
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ +K + + + ++ +
Sbjct: 50 LNFDQIALLESKRIIAMGPGTSKQLRKHSYVAEIPDKDFSS--EGVINLLNKSELTGKTL 107
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ G+ + +YL ++ Y Q +K D ++F + +V
Sbjct: 108 VIKGEGGLSNISNYLNSASFKTDELNTYNRQKFE-NYIGIKKQFSGIDFVIFSSALAVEI 166
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPAS 208
+F + + FL +S I I +
Sbjct: 167 YFEHIHNNQDTLKFLAVSKRIQDVIGSY 194
>gi|297538416|ref|YP_003674185.1| Uroporphyrinogen III synthase HEM4 [Methylotenera sp. 301]
gi|297257763|gb|ADI29608.1| Uroporphyrinogen III synthase HEM4 [Methylotenera sp. 301]
Length = 276
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 54/238 (22%), Gaps = 30/238 (12%)
Query: 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITSSESLSTLPA 65
+ + ++K G P+ P I D + + + + + L A
Sbjct: 25 GEQLADLVRKYGGTPLSAPALAEIPDIDPALITSLINDWQINAPDIFIFQTGVGVKALFA 84
Query: 66 NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA-----------KIIVEQKVLFT 114
+ + + + +++ E
Sbjct: 85 TTDTLGITEQLKQILESSIVIVRGIKPSSALRSYKVRIDATAGDPFTTTEVLTELDKYKI 144
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL----LQNADAI 170
K + N + L + I Y A + + + D +
Sbjct: 145 KGKRVAVQRYGDVNLELQQALDTRGAIVTEIATYRWSLPADTQPLVDLMDALDAGKVDMV 204
Query: 171 LFYARSSVLYFF---------SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
F + S V FF L A + + A+ V P
Sbjct: 205 CFTSASQVYNFFTVAEALGRHQALLAALNKSMVASIGPVCTVALNKFGIKVDVEPQPP 262
>gi|254468011|ref|ZP_05081417.1| uroporphyrinogen-III synthase [beta proteobacterium KB13]
gi|207086821|gb|EDZ64104.1| uroporphyrinogen-III synthase [beta proteobacterium KB13]
Length = 247
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/217 (8%), Positives = 50/217 (23%), Gaps = 17/217 (7%)
Query: 6 TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD----RESVFLAMQQSYGAIAITSSESLS 61
TR + + + P + + I SS +
Sbjct: 7 TRSSLQNQSIINFFKGSSLNVIDYPFIEIEPIFSTPEIKKIIDDMHLFSKIIFISSNAAQ 66
Query: 62 TL-----PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ + + + + ++ ++
Sbjct: 67 CFKIISEHHSIKFSDNVQIFAIGPTTKKELSFLKKNIFSPIDQFDSKTLLELPEIQNVKD 126
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD-AILFYAR 175
+ ++ + G ++ L + + + ++CY + N Q IL +
Sbjct: 127 ESILIVRGVGGKELLKNELEKKQANIAYLECYQRIFKLIDFNIITNYSQKETLYILITSS 186
Query: 176 SSVLYFFSLPLPAKI-------SAAFLCLSNNIASAI 205
+F F+ NIA +
Sbjct: 187 QIAQHFIDQLGLFGNPDQIHFDHICFIVNHENIAKEL 223
>gi|153807141|ref|ZP_01959809.1| hypothetical protein BACCAC_01418 [Bacteroides caccae ATCC 43185]
gi|149130261|gb|EDM21471.1| hypothetical protein BACCAC_01418 [Bacteroides caccae ATCC 43185]
Length = 163
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 44/159 (27%), Gaps = 6/159 (3%)
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
F + EA A ++ + + + +V V + + N
Sbjct: 1 MKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLVPSIVK-HKTEKYLVPMSDVHNDD 59
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI 190
+ L ++ I Y + + + D ++F++ + V
Sbjct: 60 VKTLLDKNGIQHTEAVMYRTVSNDFTPDE----EFDYDMLVFFSPAGVTSLKKNFPDFDQ 115
Query: 191 S-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ A A+ + + A + S+ L
Sbjct: 116 KEIKIGTFGSTTAQAVRDAGLRLDLEAPTVQAPSMTAAL 154
>gi|257471643|ref|ZP_05635642.1| uroporphyrinogen-III synthase, putative [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
Length = 137
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/122 (10%), Positives = 33/122 (27%), Gaps = 7/122 (5%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
+I L G+ + L + + +I+CY ++ ++
Sbjct: 10 KNNRIILLQGENGRKLIKRRLEKEGFKICLIECYKRVFKILDTNMEVKKWRSYKIDTLVV 69
Query: 173 YARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S+ ++ + + N V V+ + S +K
Sbjct: 70 TNSESLHQLKNIISSTNQIQWLFGCRIFVVGKRLFRIAKKLGWNDVIVSKYANNDSFIKR 129
Query: 228 LP 229
+
Sbjct: 130 IK 131
>gi|311086315|gb|ADP66397.1| uroporphyrinogen-III synthase, putative [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086889|gb|ADP66970.1| uroporphyrinogen-III synthase, putative [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087479|gb|ADP67559.1| uroporphyrinogen-III synthase, putative [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087961|gb|ADP68040.1| uroporphyrinogen-III synthase, putative [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 137
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 32/119 (26%), Gaps = 7/119 (5%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA--ILF 172
+I L G+ + L + + +I+CY ++ ++
Sbjct: 10 KNNRIILLQGENGRKLIKRRLEKEGFKICLIECYKRVFKILDTNMEVKKWRSYKIDTLVV 69
Query: 173 YARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
S+ ++ + + N V V+ + S +K
Sbjct: 70 TNSESLHQLKNIISSTNQIQWLFGCRIFVVGKRLFRIAKKLGWNDVIVSKYANNDSFIK 128
>gi|192292927|ref|YP_001993532.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
TIE-1]
gi|192286676|gb|ACF03057.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
TIE-1]
Length = 281
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/265 (9%), Positives = 58/265 (21%), Gaps = 41/265 (15%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIA 53
I+I TR + + + G + P+ + + + +
Sbjct: 9 RILILETREEAQ---FARLLTEQGADVLQCPMFEIRDAPDPAPVSAWIDRLIAAPFDDLV 65
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNS---------INLAK 104
+ + E L L A + ++
Sbjct: 66 LLTGEGLRRLTKLARATDRERPFVAAVGRTRTFIRGPKPGRALREIGLEPQVTAEAPTSE 125
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFE--DYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
I + I + P H D + + + Y A +T +
Sbjct: 126 GIAATLKRYDLAGRRIGVQLYPERDHAALLDSITAQDATVDAVLPYSYDARAAEQTVVTA 185
Query: 163 L----LQNADAILFYARSSVLYFFSLPLPAKI---------SAAFLCLSNNIASAIPASY 209
+ DA+ + V F + + + + A
Sbjct: 186 VEEMAQGRVDALALTSSGQVRRLFDVARAHNREDRLRDGLSRTPIASVGPVVTEELAAHG 245
Query: 210 KNVVTVAC------FPKETSLLKLL 228
P ++++ L
Sbjct: 246 FAPTITPANEAFFMKPLISAMIVAL 270
>gi|325693640|gb|EGD35559.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK150]
Length = 479
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/217 (7%), Positives = 50/217 (23%), Gaps = 8/217 (3%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTP 72
R ++ G P + + + L + + +S +
Sbjct: 262 GRLPRLLRDAGAALTTFPARDLV-EELDLQLPDLEQVDGLLFADMQSWPLFLKALRKAGK 320
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
A + + + Q+ L GG E
Sbjct: 321 DLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAALEKEGGNWYILTAE 377
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA 192
L + S +A+ + + + ++ + F + A
Sbjct: 378 HKKASL-AELYSLPIIASHRLAFDSQISSDNWSEIEVVCLPNSAAAMNFVAASQEAGFDW 436
Query: 193 ---AFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + + + + + + + S++
Sbjct: 437 TDVPIVVMGASTRAVLEEAGFSGIVETDEATIASIID 473
>gi|313159149|gb|EFR58524.1| putative uroporphyrinogen-III synthase HemD [Alistipes sp. HGB5]
Length = 286
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 62/240 (25%), Gaps = 20/240 (8%)
Query: 2 YIVITRPIKKA---LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAIT 55
+++++P E +K P + F A ++ A+ T
Sbjct: 5 KVLVSQPRPAIIEKSPFYELSEKYKVEIAYKPFIRVVGVSLKEFRAQRVEILTHTAVIFT 64
Query: 56 SSESLSTLPANF-------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
S ++ + EA A ++ + + I
Sbjct: 65 SRTTVDSFFHICEEARITVPETMKYICQTEAVALYLQKYIVYRKRKISFADGSFTSFIEL 124
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ + +P + L + K+ + + L +
Sbjct: 125 IIKH--KDEKFLLALSEPHKPELPETLAKLKMSFDPAILARTVAADMDD----IALTDYG 178
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ Y+ S V + A A + V+ A P+ S++K +
Sbjct: 179 LLALYSPSDVKTLVEKFGTENLPA-VAVFGEGTLRAALDAGITVLANAPTPEAPSMVKAI 237
>gi|125717339|ref|YP_001034472.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK36]
gi|125497256|gb|ABN43922.1| Uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase,
putative [Streptococcus sanguinis SK36]
Length = 479
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/230 (6%), Positives = 55/230 (23%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+I +++ R ++ G P + + + L + + +S
Sbjct: 253 KILI----QQSETGRLPRLLKDAGAALTTFPARDLV-EELELQLPDLEQVDGLLFADMQS 307
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A + ++ + T
Sbjct: 308 WPLFLKALRKAGKDLRSLPHIRFAAIGHHTAKSIEASGIVLDRMT----PQQSDTDFATA 363
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ G ++ L + S +A+ + + ++ +
Sbjct: 364 LEKEGGNWYILTAEHKKASLAELYSMPIIASHRLAFGSQINSTNWLEIEVVCLPNSAAAM 423
Query: 180 YFFSLPLPAKISAA---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S++
Sbjct: 424 NFVAASQEAGFDWKDVPIVVMGASTRAVLAEAGFSKIVETDEATIASIVD 473
>gi|328856205|gb|EGG05327.1| hypothetical protein MELLADRAFT_75003 [Melampsora larici-populina
98AG31]
Length = 293
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLP----LPAKISAAFLCLSNN 200
Y + I P + ILF S+ L F L P S F + +
Sbjct: 183 WQVYTAHPIPKPAIQPLLPSFPSWVILFSPNSASLAFPQLKSLLENPHATSLRFAAIGPS 242
Query: 201 IASAIPA-SYKNVVTVACFPKETSLLKLL 228
++ + ++ VA P+ +LL+ +
Sbjct: 243 TRDSLKSILGRSPDAVAPRPQPDALLEAI 271
>gi|126460069|ref|YP_001056347.1| uroporphyrinogen-III synthase (HemD) [Pyrobaculum calidifontis JCM
11548]
gi|126249790|gb|ABO08881.1| uroporphyrinogen-III synthase (HemD) [Pyrobaculum calidifontis JCM
11548]
Length = 235
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/223 (11%), Positives = 53/223 (23%), Gaps = 16/223 (7%)
Query: 1 MYIVITRPIKKALRTQEKI-QKMGYI-PVMMPLSYFIH--DRESVFLAMQQSYGAIAITS 56
M +V+T P E + +G V P+ + + S
Sbjct: 1 MRVVVTSPRA-----VELFVRVLGRERVVAAPVVKLVPRSISAEEVAKALAGATHVVFVS 55
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
L +FA A KG + + + E
Sbjct: 56 GAVAYRLAEVLHGAGALFAGRAV-ATAEGAKGAVMVKNKFGVEAYPGQTWEEVAAWARGC 114
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARS 176
+ + + L + Y + + + D +F++
Sbjct: 115 GAAVVFHHGEFHRELAEALEALCGSVAHFQLYDAVP-EDLDKMRLLVEPGGDVYVFFSGV 173
Query: 177 SVLYFFSLPLPAKISAAF-----LCLSNNIASAIPASYKNVVT 214
+V Y P ++ + +A A+ V
Sbjct: 174 AVEYAVENPYGLPVAERLRRAVNVAAGPAVAKALAKYGIEAVV 216
>gi|146342113|ref|YP_001207161.1| putative uroporphyrinogen-III synthase [Bradyrhizobium sp. ORS278]
gi|146194919|emb|CAL78944.1| Putative uroporphyrinogen-III synthase [Bradyrhizobium sp. ORS278]
Length = 274
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/270 (9%), Positives = 66/270 (24%), Gaps = 45/270 (16%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIA 53
I+I TR + + + G + P+ + + + +
Sbjct: 9 RILILETREEAQ---FSRLLAEQGADVLQCPMFTIQDAPDPAPIEAWIRRCTDRPFDDLV 65
Query: 54 ITSSESLSTLP-------------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI 100
+ + E L L A + + L +Q+ K S
Sbjct: 66 LMTGEGLRRLMTVVRRIGVETEFVAALGKARKFTRGPKPGRALRELGLESQVTTEKPTSE 125
Query: 101 NLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM 160
+A+++ + + + L + + + + Y A +
Sbjct: 126 GVAELLGRYDL--KGHRLGLQLYPDKDHSALIGAIEATGAEVDAVLPYVYDAKAADANIL 183
Query: 161 KNL----LQNADAILFYARSSVLYFFSLPLPAKI---------SAAFLCLSNNIASAIPA 207
+ DAI + F + + + + + A
Sbjct: 184 TAIDEMTAGKVDAIALTSSGQPRRLFDVAKAHGVEDRLRHGLARTQIASVGPVVTEELAA 243
Query: 208 SYKNVVTVAC------FPKETSLLKLLPLR 231
+ P +++ L ++
Sbjct: 244 HGLSPSITPVGEAYFMKPLISAMATALGVK 273
>gi|52081193|ref|YP_079984.1| uroporphyrinogen-III synthase [Bacillus licheniformis ATCC 14580]
gi|52786576|ref|YP_092405.1| uroporphyrinogen-III synthase [Bacillus licheniformis ATCC 14580]
gi|319644839|ref|ZP_07999072.1| YjjA protein [Bacillus sp. BT1B_CT2]
gi|52004404|gb|AAU24346.1| Putative Uroporphyrinogen III synthase YjjA [Bacillus licheniformis
ATCC 14580]
gi|52349078|gb|AAU41712.1| YjjA [Bacillus licheniformis ATCC 14580]
gi|317392648|gb|EFV73442.1| YjjA protein [Bacillus sp. BT1B_CT2]
Length = 275
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 57/249 (22%), Gaps = 34/249 (13%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTL---- 63
I+K G +P++ L + E +++ + T+ TL
Sbjct: 19 DEMSTLIKKQGGVPLIRSLQGTVFLAEKEVGPDLRAFVETGADWVIFTTGIGTETLVSLA 78
Query: 64 ------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
A +A K D +I + K
Sbjct: 79 EKLGIGERYLQAIRRAKAASRGYKTIAALKKLGITPVAADEDGTTKGLIDSLQSHDFSGK 138
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---LLQNADAILFYA 174
++ +L E + + Y + + + DA+ F
Sbjct: 139 RVMVQLHGENAPSLLQFLEEKGADVVPLLPYRHVAPDRETVALLCSEIINREVDAVCFTT 198
Query: 175 RSSVLYFFSLPLPAKISAAFL----------CLSNNIASAIPASYKNVVTVACFPKET-- 222
V F + + + A A+ + P
Sbjct: 199 AVQVRSLFHFAKENGYAEKIVQSFQDSVLAAAVGKVTAEALREEGVERLL---APDLERM 255
Query: 223 -SLLKLLPL 230
+++ L
Sbjct: 256 GAMIVELAR 264
>gi|308178513|ref|YP_003917919.1| uroporphyrinogen-III synthase [Arthrobacter arilaitensis Re117]
gi|307745976|emb|CBT76948.1| putative uroporphyrinogen-III synthase [Arthrobacter arilaitensis
Re117]
Length = 366
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/254 (9%), Positives = 60/254 (23%), Gaps = 32/254 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAIT 55
+ +T +++ E ++ G PL + L Q + IT
Sbjct: 11 RLAVT-SDRRSAELIEAFERRGAEVTHTPLLQLAPLDDEQQLISQTQKLIEARPQIVVIT 69
Query: 56 SSESLSTLP---------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
++ L + A + + +
Sbjct: 70 TAYGLRRWVDTAEAAGLGDQLLGTLGQAQLYVRGAKAHGTVKALGLEPAAVAKDGRSASM 129
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHK-IPLRVIDCYYSQDIAYPETTMK---- 161
+ + + L E + ++ Y QD +
Sbjct: 130 LTLLEGKLQGLTVALQLHADSDHGMPHSLRELGASRVLKVEPYRWQDTSSDSGISALVEG 189
Query: 162 NLLQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKN 211
+ DA+ F + SV F +L + A+ + + +
Sbjct: 190 LCAAHFDAVTFTSAPSVHALFAAAKARNRLPALLRSLAERVVVATVGPVTAAPLIEAGIS 249
Query: 212 VVTVACFPKETSLL 225
V + +++
Sbjct: 250 P-LVPERHRMGAMI 262
>gi|300783052|ref|YP_003763343.1| uroporphyrinogen-III synthase [Amycolatopsis mediterranei U32]
gi|299792566|gb|ADJ42941.1| uroporphyrinogen-III synthase [Amycolatopsis mediterranei U32]
Length = 367
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/241 (10%), Positives = 57/241 (23%), Gaps = 31/241 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
I IT ++A + + G P + + L ++ A+ T+
Sbjct: 12 IGIT-AARRADELGALLVRKGASVRYGPAIRIVPLTDDTELHAATSRLLEAPVDAVVATT 70
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHG----------KDNSINLAKII 106
++ E + + ++ S + A+++
Sbjct: 71 GIGFRGWLEAAEGWGLGDSLLERLSSASLLARGPKVTGALRAAGLSESYSPASESNAELL 130
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---- 162
+ +F D L + I Y P +
Sbjct: 131 QHLLSSGVDGLRIAVQLHGEPLPYFVDTLRASGAEVIEIPVYRWVGPVDPGPVDRLLDGV 190
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNV 212
L + A+ F + + +L C+ A + A
Sbjct: 191 LDGSIHALPFTSAPAAASLIALARRTGRLPGLVSALSGPVVAACVGPITAGPLAALGVPT 250
Query: 213 V 213
V
Sbjct: 251 V 251
>gi|159042456|ref|YP_001541708.1| uroporphyrinogen III synthase HEM4 [Caldivirga maquilingensis
IC-167]
gi|157921291|gb|ABW02718.1| Uroporphyrinogen III synthase HEM4 [Caldivirga maquilingensis
IC-167]
Length = 234
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/233 (9%), Positives = 59/233 (25%), Gaps = 31/233 (13%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS-----YGAIAITSS 57
I++ R + E I+ G + +P+ + L + + + S+
Sbjct: 5 IIVIRAKGE-----EGIRGEG--VIEVPVLK--PIPDQNALRRLEELCSRRWDVVVFMST 55
Query: 58 ESLSTLPANF--CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
++ + A+G ++A R+ + + S ++ +
Sbjct: 56 VAVEYTYSVVKDPCWVRCMAVGPSTAAAVRRLYNNECLIPSEYSSM--GLLRMLRGFNGS 113
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-----TMKNLLQNADAI 170
+ + E + S + + + A+
Sbjct: 114 ILVIRSMEYSNSL------FNELGGVTEIGLYRLSVNEDELSKLKALINEREAAGSPYAL 167
Query: 171 LFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + S L A + + A + ++A
Sbjct: 168 IITSPRVARE-VSGILLNLRRALIVAIGPTTAKELSMLNIPH-SIAKVYTIDG 218
>gi|307717038|gb|ADN88572.1| uroporphyrinogen-III synthase [Listeria welshimeri]
Length = 165
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 50/160 (31%), Gaps = 6/160 (3%)
Query: 36 HDRESVFLAMQQSYGAIAITSSESLSTLP--ANFCRHTPIFAIGEASACLARQKGFTQIF 93
+ + +F Q+ + +TS ++ H IGE + + G+ F
Sbjct: 4 YPKHIIFDLAQKEADWVFLTSVNAVEYFFATQIDKAHYKYAVIGERTKEKLAEYGYKPAF 63
Query: 94 HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
+ + E Q ++ ED LI + I Y +
Sbjct: 64 VPSIYQSEV--FLSEWLNENQQQTRILLPRSNLSRSIMEDTLIAKGHLVSPIVLYETIFP 121
Query: 154 AYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKIS 191
+ +K LQ I+F + S+ F+S+
Sbjct: 122 NDSKALLKKQLQLNEKKIIVFASPSAWKNFYSIAGSFSNQ 161
>gi|56420364|ref|YP_147682.1| uroporphyrinogen-III synthase [Geobacillus kaustophilus HTA426]
gi|47076789|dbj|BAD18331.1| unknown conserved protein [Geobacillus kaustophilus]
gi|56380206|dbj|BAD76114.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 264
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 51/246 (20%), Gaps = 28/246 (11%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITSSESLSTLPANF 67
I+K G ++ P + E + + I T+ L
Sbjct: 15 DEMTTLIEKQGGTAIIRPAQGTVFSKGSELGEEMRTVIAMRPDWIVFTTGIGFEALLEAA 74
Query: 68 CRHTPIFAIGEASACLARQ----------KGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
R K +IV K
Sbjct: 75 DREGMAAEWHRTIKEANVAARGYKTVTALKQIGVTPVAASEDGTTKGLIVALDGHDFADK 134
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNADAILFYA 174
++ + +E + Y + DA+ F +
Sbjct: 135 NVVVQLYGDTAPALRQFFLERGASYTELLPYRHVAPDEKTLETLYNEVVGREVDAVCFTS 194
Query: 175 RSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V +FFS L + + A+ + V + ++
Sbjct: 195 AMQVRFFFSFAREKKEIAPLLDAFRTDVVACAVGKVTKEALEEEGVDRVIAPEHERMGAM 254
Query: 225 LKLLPL 230
+ L
Sbjct: 255 IVTLAR 260
>gi|171184766|ref|YP_001793685.1| uroporphyrinogen III synthase HEM4 [Thermoproteus neutrophilus
V24Sta]
gi|170933978|gb|ACB39239.1| Uroporphyrinogen III synthase HEM4 [Thermoproteus neutrophilus
V24Sta]
Length = 236
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/222 (9%), Positives = 53/222 (23%), Gaps = 19/222 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPL--SYFIHDRESVFLAMQQSYGAIAITSSE 58
M + +T P + + G V P+ + + + S
Sbjct: 1 MRLAVTSPRA-LEAFRALAARAGVEVVEAPMAVLKPAPLDAEAVVRALEEADLVVFASGH 59
Query: 59 ----SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ L + + A + R+ ++ + +
Sbjct: 60 AAYRAAEALGPLRDAASRLLAKAVVATAEGRKGAVMVKNAFGVEPQVVSDTVE--GLSLP 117
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
+ R+ + + P + +ADA++F +
Sbjct: 118 GCRRAAVFHYGWRDPELLAKVACPAAEFQPYV------AEPPPREAVERVLSADAVVFTS 171
Query: 175 RSSVLYFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNV 212
+V YF + + + ++ A+
Sbjct: 172 ALAVRYFAEVGGAEAVERLKGLIVVAAGPGVSKALAELGVPH 213
>gi|223040259|ref|ZP_03610537.1| uroporphyrinogen-III synthase [Campylobacter rectus RM3267]
gi|222878512|gb|EEF13615.1| uroporphyrinogen-III synthase [Campylobacter rectus RM3267]
Length = 243
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 64/199 (32%), Gaps = 11/199 (5%)
Query: 31 LSYFIHDRESVFLAMQQSYGAIAITSSESLST--LPANFCRHTPIFAIGEASACLARQKG 88
+ + F + A+ +TS S++ I++IGE ++ AR+ G
Sbjct: 49 TLVLNEIKFNKFSVNLAEFDALVLTSKNSVNALKFNQISPAGLQIYSIGEGTSRAAREFG 108
Query: 89 FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCY 148
F QI+ K+ + K ++L + + L E + L I Y
Sbjct: 109 FAQIYTAKNAH---GNDFAAEIASLLNGKKTLFLRARETASSVGEILRESGVNLTQIIAY 165
Query: 149 YSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
+ + AI+F A S+V F S + + A +
Sbjct: 166 ENVFKPLEKE---QKPPKNSAIIFTAPSAVRNFTRNFG-WDESYKAVAIGLTTAKELGN- 220
Query: 209 YKNVVTVACFPKETSLLKL 227
V+ S + L
Sbjct: 221 -FTAPAVSSEQNINSCVSL 238
>gi|307717078|gb|ADN88592.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
gi|307717080|gb|ADN88593.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
gi|307717096|gb|ADN88601.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/162 (11%), Positives = 42/162 (25%), Gaps = 3/162 (1%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
+ + QQ + +TS+ ++ N + F
Sbjct: 1 IKTRPIKMDLS-REQQQTDWLFLTSANAVEYFFTNQHERFNYKIAVIGEKTKEKLAEFGH 59
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ + + E + ++ +D LIE + + Y +
Sbjct: 60 EPNFVPSIYQSEVFLEEWLNENPEKTSILIPQSNLSRTIIKDRLIEKGYIVVSFELYETI 119
Query: 152 DIAYPETTMKNL--LQNADAILFYARSSVLYFFSLPLPAKIS 191
+ + L I+F + S+ F+S
Sbjct: 120 FPENSKIRLIEQLKLNETQIIVFASPSAWKNFYSTAKSFPAQ 161
Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+ Q D + + ++V YFF+ + + + + V
Sbjct: 10 LSREQQQTDWLFLTSANAVEYFFTN-QHERFNYKIAVIGEKTKEKLAEFGHEPNFVPSIY 68
Query: 220 KETSLLK 226
+ L+
Sbjct: 69 QSEVFLE 75
>gi|212695967|ref|ZP_03304095.1| hypothetical protein ANHYDRO_00500 [Anaerococcus hydrogenalis DSM
7454]
gi|212677090|gb|EEB36697.1| hypothetical protein ANHYDRO_00500 [Anaerococcus hydrogenalis DSM
7454]
Length = 291
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS--YGAIAITSSES 59
I +TR + ++ +EK++ +G+ ++P + + + Y + TS +
Sbjct: 197 KIALTRDYESTIKDKEKLEDLGFDVKIVPTIKILEKNTDLLEEKFKDFSYDYLVFTSKNA 256
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
+ + I IG+ +K
Sbjct: 257 VKIFFDKLIENHDIRDIGKVKIAAIGEKPKRN 288
>gi|67459223|ref|YP_246847.1| hypothetical protein RF_0831 [Rickettsia felis URRWXCal2]
gi|67004756|gb|AAY61682.1| unknown [Rickettsia felis URRWXCal2]
Length = 284
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 83/275 (30%), Gaps = 53/275 (19%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYI--PVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ T ++I K + PL + ++ + +Y I ITS
Sbjct: 11 MKSVLLTRNIEENNETIKEISKYNLDLRYIHCPLIKYETLDFNIDI--LDNYSNIIITSK 68
Query: 58 ES--------------------------------------LSTLPANFCRHTPIFAIGEA 79
+ + P + T + E
Sbjct: 69 YAANILAGYNLKQDIWVVGSKSKRLLGKKVIYTAKNVEDLIKHFPPDLYEQTIYLSSNEI 128
Query: 80 SACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHK 139
+ L + I++ + + II E K Y + E
Sbjct: 129 TKDLPNKIARHIIYNVEYLNELPVSIIKEFKSNIRHLSKPAY--REKVKGDTEVLATAAY 186
Query: 140 IPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYF-----FSLPLPAKISAAF 194
I +R S E + + + D IL Y+++S F + L +
Sbjct: 187 IEVREDASTGSTYKLPLEAKFRKM--SIDFILLYSQNSAKTFLRLLLQNNLLEYLQDSLV 244
Query: 195 LCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ +S +A+ + + V ++KLL
Sbjct: 245 VAISLKVANIVR-PFIKNVVYCDDQNPNDIIKLLS 278
>gi|332669781|ref|YP_004452789.1| Uroporphyrinogen III synthase HEM4 [Cellulomonas fimi ATCC 484]
gi|332338819|gb|AEE45402.1| Uroporphyrinogen III synthase HEM4 [Cellulomonas fimi ATCC 484]
Length = 372
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/259 (9%), Positives = 63/259 (24%), Gaps = 37/259 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
++IT +++ + + G P + + L + + +T+
Sbjct: 14 VLIT-ADRRSAELAAALGRRGATVRHAPALGMVPHIDDAALLSGTRSLLADPPDTVVVTT 72
Query: 57 SESLSTLPA------------NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
R T I A G + + G T + + +
Sbjct: 73 GIGFRGWIEAADAAGLAEPLVEMLRGTRIVARGPKARGAIQAAGLTADWVAESETSAEIA 132
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ + + + ++ +R + Y P ++
Sbjct: 133 QVLLDEGVAGHD--IAVQHHGAGADGLDEAFAAAGARVRSLVVYRWGPPPDPAVVTSSVR 190
Query: 165 Q----NADAILFYARSSVLYFFSLPLPAK-----------ISAAFLCLSNNIASAIPASY 209
DA++F + ++ + A +
Sbjct: 191 AVAGGEVDAVVFTSAPGAAAWWEAADAEGVADDIVHHCRAERVVMAAVGPVTARPLLDRG 250
Query: 210 KNVVTVACFPKETSLLKLL 228
V + SL++ L
Sbjct: 251 VEP-LVPDRGRLGSLVRTL 268
>gi|189211255|ref|XP_001941958.1| uroporphyrinogen-III synthase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978051|gb|EDU44677.1| uroporphyrinogen-III synthase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 322
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/269 (8%), Positives = 59/269 (21%), Gaps = 67/269 (24%)
Query: 24 YIPVMMPLSYFIHDRE---------------SVFLAMQQSYGAIAITSSESLSTL----- 63
Y PV +P+ R+ +YGA+ TS ++
Sbjct: 50 YAPVFVPVLEHRFKRDALSEVRRHVTSRGFVPQAQQGLATYGALIFTSQRAVEAFSAVVE 109
Query: 64 ----------PANFCRHTPIFAIGEASACLARQKGFTQI--------------FHGKDNS 99
P++ +G A+A R G F + +
Sbjct: 110 EIRNEGALDIDDLLPESLPLYVVGPATARGLRSLGLKCPILGEETGNGEALAGFILRHYN 169
Query: 100 INLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
+ + K + + E + + + Y + ++ +
Sbjct: 170 AMHPDTLNPPVLFMVGDKRRDIIPKTLQAPELEPNMRAR---VDELVIYETGEMQSFKQD 226
Query: 160 MKNLLQN-------ADAILFYARSSVLYFFSLPL------------PAKISAAFLCLSNN 200
+ +N ++ ++ S +
Sbjct: 227 FTAIWRNNAEQGSNHQWVVVFSPSGCKAMLESLGLLDPETGRTKSVTDPRDILIATIGPT 286
Query: 201 IASAI-PASYKNVVTVACFPKETSLLKLL 228
+ A P + + +
Sbjct: 287 TRDYLIQEFGFTPDVCAEKPSPEGIAEGI 315
>gi|39937093|ref|NP_949369.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
CGA009]
gi|39650951|emb|CAE29474.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
CGA009]
Length = 281
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/265 (8%), Positives = 55/265 (20%), Gaps = 41/265 (15%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIA 53
I+I TR + + + G + P+ + + + +
Sbjct: 9 RILILETREEAQ---FARLLTEQGADVLQCPMFEIRDAPDPAPVSAWIDRLIAAPFDDLV 65
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ + E L L A + ++ E
Sbjct: 66 LLTGEGLRRLTKLARATGRERPFVAAVGRTRTFIRGPKPGRALREIGLEPQVTAEAPTSE 125
Query: 114 TPQKPLIYL-----------GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
L + + D + + + Y A +T +
Sbjct: 126 GVAATLKRYDLAGRRIGVQLYPERDHAALLDSITAQDATVDAVLPYSYDARAAEQTVVTA 185
Query: 163 L----LQNADAILFYARSSVLYFFSLPLPA---------KISAAFLCLSNNIASAIPASY 209
+ DA+ + V F + + + + A
Sbjct: 186 VEEMAQGRVDALALTSSGQVRRLFDVARAHDCEDRLRDGLSRTPIASVGPVVTEELAAHG 245
Query: 210 KNVVTVAC------FPKETSLLKLL 228
P +++ L
Sbjct: 246 FAPTITPANEAFFMKPLINAMIVAL 270
>gi|118396581|ref|XP_001030629.1| uroporphyrinogen-III synthase family protein [Tetrahymena
thermophila]
gi|89284939|gb|EAR82966.1| uroporphyrinogen-III synthase family protein [Tetrahymena
thermophila SB210]
Length = 292
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 83/254 (32%), Gaps = 27/254 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSS 57
I++ + + + ++I ++G+ PV++ L F ++ ++ Y IA S
Sbjct: 37 NILLLKSEELDDQQLKQINEIGFNPVILQLLNFEYNEYQQNVEQAISHLAQYDGIAFNSV 96
Query: 58 ESLSTLPANF-CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
S+ L + + ++ ++ + + E+
Sbjct: 97 NSVKALALALKHKKIELKVRIFCVGKKTKELIASEFGIEPQIVAKSQEELSEKMKEQNIN 156
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE------TTMKNLLQNADAI 170
L+Y + ++ K+ ++ CY +Q I+ + +N AI
Sbjct: 157 GNLLYF-IGNLSNLKANFNYTDKLQIQECLCYSTQSISKEQLLSQLLNKKSIYQENLHAI 215
Query: 171 LFYARSSVLYFFSLPLPAKIS---------AAFLCLSNNIASAIPASYK------NVVTV 215
++Y+ S+ + K + + + + + + + V V
Sbjct: 216 VYYSPSNTQFLLENIQFLKENNVDFNISSVSKHIAFGKKTLNELQKFKEIHSISDSRVFV 275
Query: 216 ACFPKETSLLKLLP 229
+LK+L
Sbjct: 276 CENSTFDDILKILS 289
>gi|194014239|ref|ZP_03052856.1| uroporphyrinogen-III synthase [Bacillus pumilus ATCC 7061]
gi|194013265|gb|EDW22830.1| uroporphyrinogen-III synthase [Bacillus pumilus ATCC 7061]
Length = 273
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 59/247 (23%), Gaps = 34/247 (13%)
Query: 6 TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIA------- 53
TR K + ++K G V+ L + + +++ +
Sbjct: 15 TR---KTEEMRTLVEKQGGQAVIRSLQGTVFLAKEELKPGIETFVKKGADWVILTTGIGT 71
Query: 54 ---ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
I S+E L A + A K D + +I + +
Sbjct: 72 DTLIESAEELHLGEAFMHILSNAQIASRGYKTYAALKKRGIQPDVSDEDGTVRDLISKLE 131
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--- 167
K ++ +L + + + Y
Sbjct: 132 GKEFQDKRVMVQLHGENAPALMKFLHDKGADVLQLLPYQHTPPEPEAAETLLQEMKDGKV 191
Query: 168 DAILFYARSSVLYFFSLPLPAKIS----------AAFLCLSNNIASAIPASYKNVVTVAC 217
A+ F V FF+L + + + A A+ + +
Sbjct: 192 HAVCFTTAVQVHAFFTLAAKWERKEELQALFEHHVLAVAVGKVTAEALKEEGIDRLL--- 248
Query: 218 FPKETSL 224
P +
Sbjct: 249 APSLERM 255
>gi|255322456|ref|ZP_05363601.1| uroporphyrinogen-III synthase [Campylobacter showae RM3277]
gi|255300364|gb|EET79636.1| uroporphyrinogen-III synthase [Campylobacter showae RM3277]
Length = 210
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 51/197 (25%), Gaps = 7/197 (3%)
Query: 31 LSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFT 90
+ + F + A+ +TS S++ L N + F
Sbjct: 16 TLVLNKIKFNKFSVNLAEFDALVLTSKNSVNALKFNQILPASLQIYSIGDGTSCAAMEFG 75
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
+ + E +K L + + E L E + L I Y +
Sbjct: 76 FAQIYTAKNAHGNDFAAEIAPFLKGKKTLFLRARETASSVGEI-LRESGVNLTQIIAYEN 134
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYK 210
+ I+F A S+V F S + + A +
Sbjct: 135 VFKPLEKE---QKPPKNSVIIFTAPSAVRNFTRNFG-WDESYKAVAIGFTTAKELGN--F 188
Query: 211 NVVTVACFPKETSLLKL 227
V+ S + L
Sbjct: 189 TAPAVSAQQNINSCVNL 205
>gi|327469204|gb|EGF14676.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK330]
Length = 479
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/217 (5%), Positives = 50/217 (23%), Gaps = 8/217 (3%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTP 72
R ++ G P + + + L + + +S + +
Sbjct: 262 GRLPRLLKDAGAALSTFPARDLV-EELELNLPDLEQVDGLLFADMQSWPLFLKSLRKAGK 320
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
A + ++ + + G
Sbjct: 321 DLRSLPHIRFAAIGHHTAKSIEASGIVLDR----RTPQQSDADFAAALEKEGGNWYILTA 376
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA 192
++ L + S +A+ + + + ++ + F + A
Sbjct: 377 EHKKASLAELYSLPIIASHRLAFDSQISSDNWSEIEVVCLPNSAAAMNFVAASQEAGYDW 436
Query: 193 A---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + + + + + + + S++
Sbjct: 437 KDVPIVVMGASTRAVLEEAGFSKIVETDEATIASIID 473
>gi|307717094|gb|ADN88600.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 45/162 (27%), Gaps = 3/162 (1%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
+ ++ QQ + +TS+ ++ N + + F
Sbjct: 1 IKTQPIKINLS-REQQETDWLFLTSANAVEYFFTNQYERSNYKIAVIGEKTKEKLAEFGH 59
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ + E + ++ +D LIE + I+ Y +
Sbjct: 60 EPSFVPSIYQSEVFLEEWLNENPEKTSILLPQSNLSRTIIKDTLIEKGYIVFSIELYKTI 119
Query: 152 DIAYPETTMKNL--LQNADAILFYARSSVLYFFSLPLPAKIS 191
+ + L I+F + S+ F+S+
Sbjct: 120 FPEASKKLLTEQLKLNETQIIVFASPSAWKNFYSIAKSFPAQ 161
>gi|307717030|gb|ADN88568.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 44/162 (27%), Gaps = 3/162 (1%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
+ ++ QQ + +TS+ ++ N + F
Sbjct: 1 IKTQPIKINLS-REQQETDWLFLTSANAVEYFFTNQYGDPXYKIAVIGEKTKEKLAEFGH 59
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ + E + ++ +D LIE + I+ Y +
Sbjct: 60 EPSFVPSIYQSEVFLEEWLNENPEKTSILLPQSNLSRTIIKDTLIEKGYIVFSIELYETI 119
Query: 152 DIAYPETTMKNL--LQNADAILFYARSSVLYFFSLPLPAKIS 191
+ + L I+F + S+ F+S+
Sbjct: 120 FPEASKKLLTEQLKLNETQIIVFASPSAWKNFYSIAKSFPAQ 161
>gi|295085905|emb|CBK67428.1| Uroporphyrinogen-III synthase [Bacteroides xylanisolvens XB1A]
Length = 163
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/159 (10%), Positives = 45/159 (28%), Gaps = 6/159 (3%)
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
F + EA A ++ + + + ++ V + + N
Sbjct: 1 MKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLIPSIVK-HKTEKYLVPMSDVHNDD 59
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI 190
++ L ++ I Y + + + D ++F++ + V
Sbjct: 60 VKNLLDKNNIQHTEAVMYRTVSNDFTPDE----EFDYDMLVFFSPAGVTSLKKNFPDFNQ 115
Query: 191 S-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ A A+ + + A + S+ L
Sbjct: 116 REIKIGTFGSTTAQAVRDAGLRLDLEAPTVQAPSMTAAL 154
>gi|312795371|ref|YP_004028293.1| Porphobilinogen deaminase [Burkholderia rhizoxinica HKI 454]
gi|312167146|emb|CBW74149.1| Porphobilinogen deaminase (EC 2.5.1.61) [Burkholderia rhizoxinica
HKI 454]
Length = 898
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/226 (10%), Positives = 58/226 (25%), Gaps = 23/226 (10%)
Query: 15 TQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIF 74
T + + G P I ++V +A+ A +S R
Sbjct: 280 TVRALARHGVQPH---THRIIAPGDAVRVAL----QAPVYDGGAGVSYAGEPPRRDDTPA 332
Query: 75 AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDY 134
+ + + + + LA + + ++ + G +
Sbjct: 333 VQVSSDSYASGD---APRYDSEALIDALATAFAPHGLTALQGRHVLLVRGDGGRELLAET 389
Query: 135 LIEHKIPLRVIDCYYSQDIAYPETTMKNL----LQNADAILFYARSSVLYFFSLPLPAK- 189
L H ++ + Y + + + A + + V L
Sbjct: 390 LRAHGAIVQALGAYQRRLPEPSFDAWQRVHALLAGQPHAWVLTSSEGVRNLEELAREHLN 449
Query: 190 -------ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
A + I + + +TV+ + +++ L
Sbjct: 450 RDEIVALKRAPIVTPHPRIGDTARKAGFDTITVS-GAGDQAIVGAL 494
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITSSE 58
+VITRP ++ + G PL ++ L + Y S
Sbjct: 150 VVITRPAGQSAELLTALAATGLDGFEFPLIDITDATDNAPLVDGLLDLERYALAVFVSPN 209
Query: 59 SL 60
++
Sbjct: 210 AV 211
>gi|330817975|ref|YP_004361680.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia gladioli BSR3]
gi|327370368|gb|AEA61724.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia gladioli BSR3]
Length = 733
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 32/123 (26%), Gaps = 13/123 (10%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL----LQNADAILF 172
K ++ + G + L E + ++ Y + + A L
Sbjct: 215 KRVLIVRGDGGRDWLSNRLREAGAEVELVAAYRRIVPEPSIGAWERVHALLAGEPHAWLV 274
Query: 173 YARSSVLYFFSLP--------LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ V L A A + IA A + +T + + +
Sbjct: 275 TSSEGVRNLRELADEHLTGAERDALRHAPLVAPHPRIADTARAMGFDTITQS-GAGDERI 333
Query: 225 LKL 227
+
Sbjct: 334 VHA 336
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSES 59
V+T+P ++ ++ G PL + A +Y + S +
Sbjct: 10 VLTKPEGQSAALAAQLAAAGIEAFDFPLIDIAPVADPAPLDAAFARLDAYALVVFVSPNA 69
Query: 60 LSTLPANFCRHTPI 73
+ A F P
Sbjct: 70 IDRALARFNAIWPH 83
>gi|301107057|ref|XP_002902611.1| uroporphyrinogen-III synthase, putative [Phytophthora infestans
T30-4]
gi|262098485|gb|EEY56537.1| uroporphyrinogen-III synthase, putative [Phytophthora infestans
T30-4]
Length = 268
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 70/247 (28%), Gaps = 36/247 (14%)
Query: 8 PIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIAITSSESLSTLP 64
P R ++ F + + L + Y I ITS S +
Sbjct: 23 PEPGCSR--RLLEAYFTDV-----LTFEYLNAELLLDVLTHLDRYCGIMITSPRSAIAVC 75
Query: 65 A---NFCRHTPIFAIGEASAC-------LARQKGFTQIFHGKDNSINLAKIIVEQK---- 110
+ + + A ++ K + A ++
Sbjct: 76 NVVNTLDAELKLQILDKLRAKPVFSVGEATSRELLPLGVVCKGDDAGSADLLSAYLHQDG 135
Query: 111 --VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+KP+++L G R D +P+ + Y + + E +
Sbjct: 136 ILPADCKEKPMLFLCGDKRRDVLPDSFRSRGLPMEELVVYQTCAVQTLE--LPAECMVPS 193
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIP-------ASYKNVVTVACFPKE 221
I+F++ S + L LP S + A+A+ ++ A PK
Sbjct: 194 WIVFFSPSGLKVIKELALPW-ESIRKAAIGKTTAAALHEHALATGQTFWEADVTAPKPKP 252
Query: 222 TSLLKLL 228
SL +
Sbjct: 253 DSLAGAI 259
>gi|325688042|gb|EGD30061.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK72]
Length = 479
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/229 (8%), Positives = 55/229 (24%), Gaps = 14/229 (6%)
Query: 3 IVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
I+I +++ R ++ G P + + + L + +S
Sbjct: 254 ILI----QQSETGRLPRLLRDAGAALTTFPARDLV-EELELQLPDLEQVDGFLFADMQSW 308
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ + A + + + Q+ L
Sbjct: 309 PLFLKSLRKAGRDLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAALE 365
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
GG E L + S +A+ + + ++ +
Sbjct: 366 KEGGNWYILTAEHKKASL-AELYSLPIIASHRLAFDSQISSANWSEIEVVCLPNSAAAMN 424
Query: 181 FFSLPLPAKISAA---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S++
Sbjct: 425 FVAASQEAGYDWKDVPIVVMGASTRAVLAEAGFSKIVETDEATIASIVD 473
>gi|307717062|gb|ADN88584.1| uroporphyrinogen-III synthase [Listeria welshimeri]
gi|307717068|gb|ADN88587.1| uroporphyrinogen-III synthase [Listeria welshimeri]
Length = 165
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 50/160 (31%), Gaps = 6/160 (3%)
Query: 36 HDRESVFLAMQQSYGAIAITSSESLSTLP--ANFCRHTPIFAIGEASACLARQKGFTQIF 93
+ + +F Q+ + +TS ++ H IGE + + G+ F
Sbjct: 4 YPKHIIFDLAQKEADWVFLTSVNAVEYFFATQIDKAHYKYAVIGERTKEKLAEYGYKPAF 63
Query: 94 HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
+ + E Q ++ ED LI + I Y +
Sbjct: 64 VPSIYQSEV--FLSEWLNENQQQTRILLPQSNLSRSIMEDTLIAKGHLVSPIVLYETIFP 121
Query: 154 AYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKIS 191
+ +K LQ I+F + S+ F+S+
Sbjct: 122 NDSKALLKKQLQLNEKKIIVFASPSAWKNFYSIAGSFSNQ 161
>gi|169600515|ref|XP_001793680.1| hypothetical protein SNOG_03095 [Phaeosphaeria nodorum SN15]
gi|160705454|gb|EAT89826.2| hypothetical protein SNOG_03095 [Phaeosphaeria nodorum SN15]
Length = 709
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/278 (11%), Positives = 66/278 (23%), Gaps = 59/278 (21%)
Query: 8 PIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM---------------QQSYGAI 52
P + Y PV +P+ R+++ +YGA+
Sbjct: 20 PRDTYEELFRNLDDHRYTPVFVPVLEHRFRRDALDEVRKHVTGRGFVPKAKGGLATYGAL 79
Query: 53 AITSSESLSTLPAN--------------FCRHTPIFAIGEASACLARQKGFTQIFHGKD- 97
TS ++ P++ +G A+A R G +
Sbjct: 80 IFTSQRAVEAFADIVEELRKAGNHVDDLLPDSLPLYVVGPATARGLRSLDLKCPILGDET 139
Query: 98 -NSINLAKIIVEQKVLFTPQK---PLIYLGGKPRNFHFEDYLI------EHKIPLRVIDC 147
N LA ++E P L++L G R L E + + +
Sbjct: 140 GNGEALATYMLEHYNNLYPGAGKPSLLFLVGDKRRDIIPKTLQAEELGDERRCRVDELVI 199
Query: 148 YYSQDIAYPETTMKNLL-------QNADAILFYARSSVLYFFSLPLPAKISA-------- 192
Y + ++ + L ++ ++ +
Sbjct: 200 YETGEMQSFKEEFSTLWRKNADAGCERQWVVVFSPTGCKAMLESLDLLDKQTGRAKSSAR 259
Query: 193 ---AFLCLSNNIASAIP-ASYKNVVTVACFPKETSLLK 226
+ + A P +
Sbjct: 260 NGLNIATIGPTTRDYLQHEFGFQPDVCAERPSPEGIAD 297
>gi|307717020|gb|ADN88563.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/162 (10%), Positives = 41/162 (25%), Gaps = 3/162 (1%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
+ + QQ + +TS+ ++ + F
Sbjct: 1 IKTRPIKMDLS-REQQQTDWLFLTSANAVEYFFTIQHERFNYKIAVIGEKTKEKLAEFGH 59
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ + + E + ++ +D LIE + + Y +
Sbjct: 60 EPNFVPSIYQSEVFLEEWLNENPEKTSILIPQSNLSRTIIKDRLIEKGYIVVSFELYETI 119
Query: 152 DIAYPETTMKNL--LQNADAILFYARSSVLYFFSLPLPAKIS 191
+ + L I+F + S+ F+S
Sbjct: 120 FPENSKIRLIEQLKLNETQIIVFASPSAWKNFYSTAKSFPAQ 161
Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+ Q D + + ++V YFF+ + + + + V
Sbjct: 10 LSREQQQTDWLFLTSANAVEYFFT-IQHERFNYKIAVIGEKTKEKLAEFGHEPNFVPSIY 68
Query: 220 KETSLLK 226
+ L+
Sbjct: 69 QSEVFLE 75
>gi|262370150|ref|ZP_06063477.1| uroporphyrinogen-III synthase [Acinetobacter johnsonii SH046]
gi|262315189|gb|EEY96229.1| uroporphyrinogen-III synthase [Acinetobacter johnsonii SH046]
Length = 259
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 23/229 (10%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----YGAIAITS 56
M + TRP+ +A +++ +PL + S L I + S
Sbjct: 1 MLFINTRPVDRAASLTMALEQQAVEVYPLPLLELLPRAWSHDLERLYQQLVYTQVIVVVS 60
Query: 57 SESLSTLPANF---------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ A+ +H +G+ +A + G + + S + ++ V
Sbjct: 61 PSAVQFGMAHLLQSGLTVSDLQHIQWITVGQKTAQALAEYGLDSVVPKVETSEGMLQLPV 120
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--- 164
Q + + + G+ D L++H + Y + L+
Sbjct: 121 LQNLASD--ASIAFWRGEGGRQFMMDTLMQHGCLILNFVLYERRCPNETMQQQAELIQCL 178
Query: 165 --QNADAILFYARSSVLYFFSLPLPA---KISAAFLCLSNNIASAIPAS 208
N L + +S L + +L FL L +A +
Sbjct: 179 SEHNDYVALISSEASWLNWLALLDTNIQLLQKGHFLVLGERLAQILKQY 227
>gi|307717040|gb|ADN88573.1| uroporphyrinogen-III synthase [Listeria welshimeri]
Length = 165
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 6/160 (3%)
Query: 36 HDRESVFLAMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACLARQKGFTQIF 93
+ + +F Q+ + +TS ++ A H IGE + + G+ F
Sbjct: 4 YPKHIIFDLAQKEADWVFLTSVNAVEYFFATRIDKAHYKYAVIGERTKEKLAEYGYKPAF 63
Query: 94 HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
+ + E Q ++ ED LI + I Y +
Sbjct: 64 VPSIYQSEV--FLSEWLNENQQQTRILLPQSNLSRSIMEDTLIAKGHLVSPIVLYETIFP 121
Query: 154 AYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKIS 191
+ +K LQ I+F + S+ F+S+
Sbjct: 122 NDSKALLKKQLQLNEKKIIVFASPSAWKNFYSIAGSFSNQ 161
>gi|327489126|gb|EGF20921.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK1058]
Length = 479
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/230 (6%), Positives = 55/230 (23%), Gaps = 14/230 (6%)
Query: 2 YIVITRPIKKAL--RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
I+I +++ R ++ G P + + + L + + +S
Sbjct: 253 KILI----QQSETGRLPRLLKDAGAALTTFPARDLV-EELELQLPDLEQVDGLLFADMQS 307
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ A + ++ + T
Sbjct: 308 WPLFLKALRKAGKDLRSLPHIRFAAIGHHTAKSIEASGIVLDRMT----PQQSDTDFATA 363
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ G ++ L + S +A+ + + ++ +
Sbjct: 364 LEKEGGNWYILTAEHKKASLAELYSLPIIASHRLAFGSQINSTNWLEIEVVCLPNSAAAM 423
Query: 180 YFFSLPLPAKISAA---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
F + A + + + + + + + + S++
Sbjct: 424 NFVAASQEAGFDWKDVPIVVMGASTRAVLAEAGFSKIVETDEATIASIVD 473
>gi|29348635|ref|NP_812138.1| hypothetical protein BT_3226 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29340540|gb|AAO78332.1| uroporphyrinogen-III synthase HemD, putative [Bacteroides
thetaiotaomicron VPI-5482]
Length = 163
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 45/159 (28%), Gaps = 6/159 (3%)
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
F + EA A ++ + + + +V V + + N
Sbjct: 1 MKYFCVTEAVALYIQKYVQYRKRKIFFGATGKIEDLVPSIVK-HKTEKYLVPMSDVHNDD 59
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI 190
++ L ++ I Y + + + D ++F++ + V
Sbjct: 60 VKNLLDKNNIQHTEAVMYRTV----SNDFTSDEEFDYDMLVFFSPAGVTSLKKNFPDFDQ 115
Query: 191 S-AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ A A+ + + A + S+ L
Sbjct: 116 KEIRIGTFGSTTAQAVRDAGLRLDLEAPTVQAPSMTAAL 154
>gi|114320860|ref|YP_742543.1| uroporphyrinogen III synthase HEM4 [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227254|gb|ABI57053.1| Uroporphyrinogen III synthase HEM4 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 281
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/256 (10%), Positives = 58/256 (22%), Gaps = 39/256 (15%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYF------IHDRESVFLAMQQSYGAIAITSSESLSTLP 64
+ +++ G PL + + + + + + E L L
Sbjct: 26 QLEVLAGLLERRGARVWRCPLVGIHDVANPAPVDDWLRDFVADPPDLLILLTGEGLRRLL 85
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV-----------EQKVLF 113
+ A A + + + +
Sbjct: 86 SRCEAIGLRDAFLNALSGTSVLCRGPKPARVLQELALTPDRMAVEATTEGVIRTLNGDEL 145
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT----MKNLLQNADA 169
++ + L G N DYL + + Y D A + + DA
Sbjct: 146 QGRRVAVQLYGTNPNQRLMDYLKKAGAHTTTVAPYVYADEAEDDEVRQLVVALGEGRLDA 205
Query: 170 ILFYARSSVLYFF---------SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVAC--- 217
++ + V L + +A A+ V +
Sbjct: 206 LILTSSPQVQRLLQVAKAGNLEELLRDGLRQCTVAAIGPVVARALRERALPVDLMPEHRW 265
Query: 218 --FPKETSLLKLLPLR 231
P L++ L
Sbjct: 266 FMKP----LVQALAKH 277
>gi|299117134|emb|CBN75098.1| uroporphyrinogen synthase, putative chloroplast precursor
[Ectocarpus siliculosus]
Length = 380
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 69/280 (24%), Gaps = 60/280 (21%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY---GAIAITSSES 59
+ +TR K + + + G V +P + L + + +TS E+
Sbjct: 75 VALTREAGKNGKLAKLLTDAGISSVEVPCIAHQDGPDLPLLPAALADPGLAYVVVTSPEA 134
Query: 60 LSTLPANFCR------HTPIFAIGEASACLARQKGFTQIFHGKD-NSINLAKIIVEQKVL 112
A + + P+ +G+A+ R G + +F LA I
Sbjct: 135 AKVFLAGWAKAGVPGVPVPVACVGKATGDALRAGGVSPVFTPSKATGETLAAEIPLPPSA 194
Query: 113 FTPQK-----------------------------PLIYLGGKPRNFHFEDYLIEHKIPLR 143
++Y E L +R
Sbjct: 195 PADDTAAAAAAPSEAEETTGAGGEGGSSSPGGGPRVLYPASAKAQNTLESGLRARGFEVR 254
Query: 144 VIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFL-------- 195
++ Y + + E+ + A F + S+V + +
Sbjct: 255 RLNTYDTVPATWDESAEAAAAGASVAA-FGSPSAVKTWAARMGVVAAGVGGAGAEGSGGG 313
Query: 196 ----------CLSNNIASAIPASYKNVVTV--ACFPKETS 223
C+ A A + + P
Sbjct: 314 ESGGGGALAACIGETSARACREAGWAESAIFYPEKPGMEG 353
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 8/88 (9%), Positives = 20/88 (22%), Gaps = 3/88 (3%)
Query: 142 LRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFS---LPLPAKISAAFLCLS 198
+ V + P ++ + + F + + C+
Sbjct: 99 VEVPCIAHQDGPDLPLLPAALADPGLAYVVVTSPEAAKVFLAGWAKAGVPGVPVPVACVG 158
Query: 199 NNIASAIPASYKNVVTVACFPKETSLLK 226
A+ A + V +L
Sbjct: 159 KATGDALRAGGVSPVFTPSKATGETLAA 186
>gi|283457697|ref|YP_003362283.1| uroporphyrinogen-III synthase [Rothia mucilaginosa DY-18]
gi|283133698|dbj|BAI64463.1| uroporphyrinogen-III synthase [Rothia mucilaginosa DY-18]
Length = 312
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 60/291 (20%), Gaps = 67/291 (23%)
Query: 3 IVITRPIKKALRTQEKIQ----KMGY---IPVMMPL---SYFIHDRESVFLAMQ---QSY 49
+++TR + + + G + PL + Y
Sbjct: 17 VLLTRSATQGAAFARALAEECTQNGLGEPRVLFAPLQQARTVKPGADHAAALEALASGHY 76
Query: 50 GAIAITSSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSI 100
++ TS+ ++ + I +G A+A +
Sbjct: 77 AWVSFTSANTVRACAELWGAEFARACASGGVHIACVGAATARAVHAQLGLGTDFQPQVQS 136
Query: 101 NLAKIIV---------EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
++ T ++ L G + L R Y
Sbjct: 137 AAGMLVEFESPAPVDPTADSAATDSAAVLVLEGSNARPTLREGLKNLGWDSRRCVLYDMV 196
Query: 152 DIA---------------------------------YPETTMKNLLQNADAILFYARSSV 178
T D ++ A S +
Sbjct: 197 PAEQVAPGELSLAAARALVQGTAADAPAPETLAPETPAPETPAPETPAPDVLVVTAPSRL 256
Query: 179 LYFFSLPLPAKISA--AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + + + ASA A V A P L +
Sbjct: 257 HALLDGAPALGPESMPPVVAIGASTASACRALNLRHVQ-ADSPSPQDLARA 306
>gi|218679768|ref|ZP_03527665.1| uroporphyrinogen-III synthase [Rhizobium etli CIAT 894]
Length = 87
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 149 YSQDIAYPETTMKNLLQN--ADAILFYARSSVLYFFSL-----PLPAKISAAFLCLSNNI 201
Q +A ++ + +A+LFY+R + FF++ L + LCLS +
Sbjct: 1 RMQPVAPGPAEIEAIFAGGLPEAVLFYSRQTAEDFFNVTELRSALSEESGIRLLCLSEAV 60
Query: 202 ASAIPASYKNVVTVACFPKETSLLKLL 228
A A+PA+ K +A P E SLL LL
Sbjct: 61 AQAVPAALKKNAAIAPMPDEISLLSLL 87
>gi|289677628|ref|ZP_06498518.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. syringae
FF5]
Length = 114
Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 25/81 (30%), Gaps = 4/81 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA----MQQSYGAIAITSS 57
+++TRP +++ + + G +PL + +Y A+ + S
Sbjct: 5 RLLLTRPAEESTALARVLAEDGIFSSSLPLLETEPLPLTPAQRSIIFELLNYCAVIVVSK 64
Query: 58 ESLSTLPANFCRHTPIFAIGE 78
+ P +
Sbjct: 65 PAARLAIELIDEVWPQPPLQP 85
>gi|307717090|gb|ADN88598.1| uroporphyrinogen-III synthase [Listeria welshimeri]
Length = 165
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 50/160 (31%), Gaps = 6/160 (3%)
Query: 36 HDRESVFLAMQQSYGAIAITSSESLSTLP--ANFCRHTPIFAIGEASACLARQKGFTQIF 93
+ + +F Q+ I +TS ++ H IGE + + G+ F
Sbjct: 4 YPKHIIFDVAQKEADWIFLTSVNAVEYFFATQIDKAHYKYAVIGERTKEKLAEYGYKPAF 63
Query: 94 HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
+ + E Q ++ ED LI + I Y +
Sbjct: 64 VPSIYQSEV--FLSEWLNENQQQTRILLPQSNLSRSIMEDTLIAKGHLVSPIVLYETIFP 121
Query: 154 AYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKIS 191
+ +K LQ I+F + S+ F+S+
Sbjct: 122 NDSKALLKKQLQLNEKKIIVFASPSAWKNFYSIAGSFSNQ 161
>gi|326802537|ref|YP_004320356.1| porphobilinogen deaminase [Sphingobacterium sp. 21]
gi|326553301|gb|ADZ81686.1| Porphobilinogen deaminase [Sphingobacterium sp. 21]
Length = 546
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/227 (10%), Positives = 65/227 (28%), Gaps = 11/227 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+ ITR + + +++ L ++ + + + +S +
Sbjct: 305 VFITRELADTSFLKRSLEQHHIKVEGRSLIKIFSIINTLDPYILKYVRWVFFSSKNGIEN 364
Query: 63 LPANFCRHTPI--FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
R + +A+ + A + + + + + ++
Sbjct: 365 FFKLKPRLSKHVQYAVVGRGSEEALRSHGIIPAFTGEAEGIEMEKVGDAFAQVAAGSTVL 424
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ K + L + + Y ++ E AD ++F + ++V
Sbjct: 425 FPRAKGSLQTIQSRLTAD-TKVIDLPVYETRIDEQVEG------SGADVLIFTSPTNVEA 477
Query: 181 FFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+F L + + N+ + T+ P E L +
Sbjct: 478 YFKDNLVEPGQ-KVISIGNSTGKKLEEIGVQ-YTLPFSPDELGLAEA 522
>gi|307717092|gb|ADN88599.1| uroporphyrinogen-III synthase [Listeria welshimeri]
Length = 165
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 50/160 (31%), Gaps = 6/160 (3%)
Query: 36 HDRESVFLAMQQSYGAIAITSSESLSTLP--ANFCRHTPIFAIGEASACLARQKGFTQIF 93
+ + +F Q+ + +TS ++ H IGE + + G+ F
Sbjct: 4 YPKHIIFDVAQKEADWVFLTSVNAVEYFFATQIDKAHYKYAVIGERTKEKLAEYGYKPAF 63
Query: 94 HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
+ + E Q ++ ED LI + I Y +
Sbjct: 64 VPSIYQSEV--FLSEWLNENQQQTRILLPQSNLSRSIMEDTLIAKGHLVSPIVLYETIFP 121
Query: 154 AYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKIS 191
+ +K LQ I+F + S+ F+S+
Sbjct: 122 NDSKALLKKQLQLNEKKIIVFASPSAWKNFYSIAGSFSNQ 161
>gi|324995119|gb|EGC27031.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK678]
gi|327461842|gb|EGF08173.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK1]
Length = 479
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/217 (7%), Positives = 50/217 (23%), Gaps = 8/217 (3%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTP 72
R ++ G P + + + L + + +S + +
Sbjct: 262 GRLPRLLKDAGAALTTFPARDLV-EELELQLPDLEQVDGLLFADMQSWPLFLKSLRKAGK 320
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
A + + + Q+ L GG E
Sbjct: 321 DLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAALEKEGGNWYILTAE 377
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA 192
L + S +A+ + + + ++ + F + A
Sbjct: 378 HKKASL-AELYSLPIIASHRLAFDSQISSDNWSEIEVVCLPNSAAAMNFVAASQEAGYDW 436
Query: 193 A---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + + + + + + S++
Sbjct: 437 KDVPIVVMGASTRAVLEEAGFRKIVETDETTIASIID 473
>gi|324993569|gb|EGC25489.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Streptococcus sanguinis SK405]
Length = 479
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/217 (7%), Positives = 50/217 (23%), Gaps = 8/217 (3%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTP 72
R ++ G P + + + L + + +S + +
Sbjct: 262 GRLPRLLKDAGAALTTFPARDLV-EELELQLPDLEQVDGLLFADMQSWPLFLKSLRKAGK 320
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
A + + + Q+ L GG E
Sbjct: 321 DLRSLPHIRFAAIGHHTAKSIEASG---IVLDRMTPQQSDADFAAALEKEGGNWYILTAE 377
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA 192
L + S +A+ + + + ++ + F + A
Sbjct: 378 HKKASL-AELYSLPIIASHRLAFDSQISSDNWSEIEVVCLPNSAAAMNFVAASQEAGYDW 436
Query: 193 A---FLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + + + + + + S++
Sbjct: 437 KDVPIVVMGASTRAVLEEAGFRKIVETDETTIASIID 473
>gi|307717074|gb|ADN88590.1| uroporphyrinogen-III synthase [Listeria innocua]
Length = 165
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 54/164 (32%), Gaps = 7/164 (4%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACLARQKGF 89
+ S+ L Q + +TS+ ++ + I IGE + + G+
Sbjct: 1 IETHPKKISLSLNQ-QEADWLFLTSANAVEYFFNEQAGKLNYKIAVIGEKTKEKLAEYGY 59
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
F + + E T Q ++ ED L ++ + I+ Y
Sbjct: 60 KPNFVPSVYQSEV--FLSEWLSENTSQTSILLPQSNLSRTIIEDTLTQNGHLVFPIELYE 117
Query: 150 SQDIAYPETTMKNL--LQNADAILFYARSSVLYFFSLPLPAKIS 191
+ +T + L I+F + S+ F+++ I
Sbjct: 118 TSFPENSQTILIEQLKLDEKRIIIFASPSAWKNFYTIAKQFSIK 161
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ + ++V YFF+ K++ + + V
Sbjct: 19 WLFLTSANAVEYFFNE-QAGKLNYKIAVIGEKTKEKLAEYGYKPNFVP 65
>gi|307717088|gb|ADN88597.1| uroporphyrinogen-III synthase [Listeria innocua]
Length = 165
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 7/163 (4%)
Query: 34 FIHDRESVFL-AMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACLARQKGFT 90
D + + L Q+ + +TS+ ++ + I IGE + + G+
Sbjct: 1 IETDPKKISLSLNQKEADWLFLTSANAVEYFFNEQAGKLNYKIAVIGEKTKEKLAEYGYK 60
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
F + + E T Q ++ ED L ++ + I+ Y +
Sbjct: 61 PNFVPSVYQSEV--FLSEWLSENTSQTSILLPQSNLSRTIIEDTLTQNGHLVFPIELYET 118
Query: 151 QDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKIS 191
+T + LQ I+F + S+ F+++ I
Sbjct: 119 SFPENSQTILIEQLQLDEKRIIIFASPSAWKNFYTIAKQFSIK 161
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ + ++V YFF+ K++ + + V
Sbjct: 19 WLFLTSANAVEYFFNE-QAGKLNYKIAVIGEKTKEKLAEYGYKPNFVP 65
>gi|145591433|ref|YP_001153435.1| uroporphyrinogen-III synthase (HemD), conjectural [Pyrobaculum
arsenaticum DSM 13514]
gi|145283201|gb|ABP50783.1| uroporphyrinogen-III synthase (HemD), conjectural [Pyrobaculum
arsenaticum DSM 13514]
Length = 242
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 50/210 (23%), Gaps = 12/210 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM--QQSYGAIAITSSES 59
IV+T ++ ++ G ++P+ V + S
Sbjct: 17 KIVVT-SGWAGEAFRKALR--GAEVYVVPVLRLTPVEVDVKAVEEAVAQSDLVVFVSG-- 71
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ G+ A KG + + L E P
Sbjct: 72 -RAAYRLKELGAKLELTGKVVATAEGAKGAVMVKNAYGVEPQLVYDTSEDLAKALPGCRR 130
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ ++E K P+ Y + + + AD +F++ +
Sbjct: 131 GVVFHHGERAAELVEVLEVKCPVAEFYTYRAVP----DEETIKSIPPADVYVFFSALAAE 186
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASY 209
A + + A+
Sbjct: 187 AVGERRPELIKGALAVAAGPAVERALLRYG 216
>gi|329119575|ref|ZP_08248257.1| uroporphyrinogen-III synthase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464313|gb|EGF10616.1| uroporphyrinogen-III synthase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 257
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 64/222 (28%), Gaps = 11/222 (4%)
Query: 3 IVITRPIKKALRTQEKIQKMGYI-PVMMP-LSYFIHDRESVFLAMQQSYGAIAITSSESL 60
++I RP ++A + G+ P + Q+ A+ S ++
Sbjct: 21 LLIVRPPEQAAADLRICAEAGWRGVAAAPFAVEADPAALAALPPRFQTADAVFWVSPSAV 80
Query: 61 STLPANFCRHTPIFAIG---EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ + A + S + + S + A + +
Sbjct: 81 AVAAPHLDFSDGRKAQITVGQGSRQALQTYCPHPVLSPDTGSDSEAVLRMAVWDSLPRGA 140
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ + GK D L + + Y+ + + + DA + +
Sbjct: 141 NVLIVRGKGGRGFLADNLRRRGFAVGFAEVYFRRPQSINWQAVAE--AEPDAAWVASAEA 198
Query: 178 VLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTV 215
V F+ PA S + +A A+ A+ V
Sbjct: 199 VRGLFTQAGPAFTQILQSLLYFTNHQRVADALYAAGAKRAAV 240
>gi|307717050|gb|ADN88578.1| uroporphyrinogen-III synthase [Listeria innocua]
gi|307717052|gb|ADN88579.1| uroporphyrinogen-III synthase [Listeria innocua]
Length = 165
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 7/164 (4%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACLARQKGF 89
+ S+ L + + +TS+ ++ + I IGE + + G+
Sbjct: 1 IETHPKKISLSLNQ-KEADWLFLTSANAVEYFFNEQAGKLNYKIAVIGEKTKEKLAEYGY 59
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
F + + E T Q ++ ED L ++ + I+ Y
Sbjct: 60 KPNFVPSVYQSEV--FLSEWLSENTSQTSILLPQSNLSRTIIEDTLTQNGHLVFPIELYE 117
Query: 150 SQDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKIS 191
+ +T + LQ I+F + S+ F+++ I
Sbjct: 118 TSFPENSQTILIEQLQLDEKRIIIFASPSAWKNFYTIAKQFSIK 161
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ + ++V YFF+ K++ + + V
Sbjct: 19 WLFLTSANAVEYFFNE-QAGKLNYKIAVIGEKTKEKLAEYGYKPNFVP 65
>gi|103488354|ref|YP_617915.1| uroporphyrinogen-III synthase [Sphingopyxis alaskensis RB2256]
gi|98978431|gb|ABF54582.1| uroporphyrinogen-III synthase [Sphingopyxis alaskensis RB2256]
Length = 229
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 57/193 (29%), Gaps = 11/193 (5%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST 62
+++TRP T + + +G+ MPL + + A+ +TS+ +
Sbjct: 7 LIVTRPEPGNAATVARARALGFDVHAMPLFAARPLDWT--PPDAADFDALLLTSAFAARL 64
Query: 63 LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYL 122
+ A A + A+ +++ + L
Sbjct: 65 AGPGLGALASLPAYAVGPATAEAARAAG--LTVAMAGAAGAERLLDDMTSSEIARILWLC 122
Query: 123 GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFF 182
G D ++ + CY + P L+ +L ++ +
Sbjct: 123 GRDRTALRVGDAMLA------PLPCYAVDPVDPPPAW-SALIAAPAILLAHSARAAERVA 175
Query: 183 SLPLPAKISAAFL 195
+L A+ + +
Sbjct: 176 ALAGTARGHLSLV 188
>gi|312878896|ref|ZP_07738696.1| uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III
synthase [Aminomonas paucivorans DSM 12260]
gi|310782187|gb|EFQ22585.1| uroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III
synthase [Aminomonas paucivorans DSM 12260]
Length = 504
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/235 (10%), Positives = 60/235 (25%), Gaps = 8/235 (3%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHD---RESVFLAMQQSYGAIAITSSES 59
+ + RP+ +A RT ++ G +PL + + +TS
Sbjct: 249 VAVCRPMPEAARTARFLEGRGADAFSLPLLDLEPLEFREREEAVRALEEADWTVLTSPRG 308
Query: 60 LSTLPANFCRHTPIFAIGEASA--CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
L + A + + + + + P
Sbjct: 309 PGALRRLLRDLRRLRGRLAALGPGTAGACEALGLVPDLVADPPDSEGLASALGRTLRPGD 368
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE-TTMKNLLQ--NADAILFYA 174
+++L + + + + + + Y P ++ A F +
Sbjct: 369 RVVFLRNERASSLPVEAARKAGASVTCLSAYRMVPREIPWMDLIREHWDAAPPHAAAFGS 428
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
++ + + + A+A ++ V P L L
Sbjct: 429 AATAEAWKAALGDLPPGTVPVAWGRVCAAACEDLFRRPVRTLPSPDLEGLAATLE 483
>gi|261409751|ref|YP_003245992.1| uroporphyrinogen-III synthase [Paenibacillus sp. Y412MC10]
gi|261286214|gb|ACX68185.1| Uroporphyrinogen III synthase HEM4 [Paenibacillus sp. Y412MC10]
Length = 269
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/247 (9%), Positives = 59/247 (23%), Gaps = 28/247 (11%)
Query: 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTLPAN 66
A + ++KMG V+ P + + V +++ T+ L +
Sbjct: 18 AADMAKLVEKMGGTAVLRPAQGTVFLDDEVLRRSIEAWLEAPAPWAIFTTGIGLEAIYDT 77
Query: 67 FCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ K +D+ + + +I
Sbjct: 78 AEQMGLLDTLNETLERTSIAARGYKTANALKKRGLAPVVRDDDGSTSGLIRSLAPHDLSG 137
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI-AYPETTMKNLLQ--NADAILFY 173
+ +I D+L + ++ I Y + + + + A+ F
Sbjct: 138 QRVILQLHGESAPKLVDWLQQRGAEVQQILPYKHIPPLEEDISLLVDEIVGGKVHAVAFT 197
Query: 174 ARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + + A + + V + S
Sbjct: 198 SAPQFRFLADYARAHGKLEAVLEAFRGPVVAAAVGKVTAQGLREEGIERMVVPEEERMGS 257
Query: 224 LLKLLPL 230
++ L
Sbjct: 258 MMVTLGR 264
>gi|307717056|gb|ADN88581.1| uroporphyrinogen-III synthase [Listeria innocua]
Length = 165
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 7/163 (4%)
Query: 34 FIHDRESVFL-AMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACLARQKGFT 90
+ + L Q+ + +TS+ ++ + I IGE + + G+
Sbjct: 1 IETHPKKISLSLNQKEADWLFLTSANAVEYFFNEQADKLNYKIAVIGEKTKEKLAEYGYK 60
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
F + + E T Q ++ ED L ++ + I+ Y +
Sbjct: 61 PNFVPSVYQSEV--FLSEWLSENTSQTSILIPQSNLSRTIIEDTLTQNGHLVFPIELYET 118
Query: 151 QDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKIS 191
+T + LQ I+F + S+ F+ + I
Sbjct: 119 SFPENSQTILIEQLQLEEKRIIIFASPSAWKNFYMIAKQFSIK 161
Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ + ++V YFF+ K++ + + V
Sbjct: 19 WLFLTSANAVEYFFNE-QADKLNYKIAVIGEKTKEKLAEYGYKPNFVP 65
>gi|307717044|gb|ADN88575.1| uroporphyrinogen-III synthase [Listeria innocua]
gi|307717058|gb|ADN88582.1| uroporphyrinogen-III synthase [Listeria innocua]
Length = 165
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 54/164 (32%), Gaps = 7/164 (4%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACLARQKGF 89
+ S+ L + + +TS+ ++ + I IGE + + G+
Sbjct: 1 IETHPKKISLSLNQ-KEADWLFLTSANAVEYFFNEQAGKLNYKIAVIGEKTKEKLAEYGY 59
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
F + + E T Q ++ ED L ++ + I+ Y
Sbjct: 60 KPNFVPSVYQSEV--FLSEWLSENTSQTSILLPQSNLSRTIIEDTLTQNGHLVFPIELYE 117
Query: 150 SQDIAYPETTMKNL--LQNADAILFYARSSVLYFFSLPLPAKIS 191
+ +T + L I+F + S+ F+++ I
Sbjct: 118 TSFPENSQTILIEQLKLDEKRIIIFASPSAWKNFYTIAKQFSIK 161
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ + ++V YFF+ K++ + + V
Sbjct: 19 WLFLTSANAVEYFFNE-QAGKLNYKIAVIGEKTKEKLAEYGYKPNFVP 65
>gi|116619889|ref|YP_822045.1| uroporphyrinogen III synthase HEM4 [Candidatus Solibacter usitatus
Ellin6076]
gi|116223051|gb|ABJ81760.1| Uroporphyrinogen III synthase HEM4 [Candidatus Solibacter usitatus
Ellin6076]
Length = 250
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/236 (9%), Positives = 54/236 (22%), Gaps = 34/236 (14%)
Query: 15 TQEKIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAITSSESLSTLPANFC 68
++ I+K G P + P I ++ + + +
Sbjct: 1 MEQLIRKQGGEPFVAPSMREIPLTDNEEAFAFAERLFAGEFDMAIFLTGVGTRLMDRVLA 60
Query: 69 RHT------------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ A G A R+ G + + + + +
Sbjct: 61 TRYDQGALAAALRRIAVVARGPKPAAALREMGVAPAVIAPEPNTWRELLAA---IEGRME 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP----ETTMKNLLQNADAILF 172
+ + + D L + + Y + E + D +LF
Sbjct: 118 RRIAVQEYGRPSQELLDGLRARGAEVTRVRIYQWELPEDTQPLREAVRRLSAGAIDIVLF 177
Query: 173 YARSSVLYFFSLPLPAKISAAFL---------CLSNNIASAIPASYKNVVTVACFP 219
+ + + + AA L + A+ + P
Sbjct: 178 TTAIQMAHLARIAREEGLEAALLENLRKCRVCSIGPTTTEALEEFGVHPAMEPSHP 233
>gi|329923399|ref|ZP_08278881.1| uroporphyrinogen-III synthase [Paenibacillus sp. HGF5]
gi|328941291|gb|EGG37585.1| uroporphyrinogen-III synthase [Paenibacillus sp. HGF5]
Length = 271
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/247 (9%), Positives = 59/247 (23%), Gaps = 28/247 (11%)
Query: 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY-----GAIAITSSESLSTLPAN 66
A + ++KMG V+ P + + V +++ T+ L +
Sbjct: 18 AADMAKLVEKMGGTAVLRPAQGTVFLDDEVLRRSIEAWLEAPAPWAIFTTGIGLEAIYDT 77
Query: 67 FCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ K +D+ + + +I
Sbjct: 78 AEQMGLLDTLNETLERTSIAARGYKTANALKKRGLAPVVRDDDGSTSGLIRSLAPHDLSG 137
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI-AYPETTMKNLLQ--NADAILFY 173
+ +I D+L + ++ I Y + + + + A+ F
Sbjct: 138 QRVILQLHGESAPKLVDWLKQRGAEVQQILPYQHIPPLEEDISLLVDEIVGGKVHAVAFT 197
Query: 174 ARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + + A + + V + S
Sbjct: 198 SAPQFRFLADYARAHGKLEAVLEAFRGPVVAAAVGKVTAQGLREEGIERMVVPEEERMGS 257
Query: 224 LLKLLPL 230
++ L
Sbjct: 258 MMVTLGR 264
>gi|188996004|ref|YP_001930255.1| Uroporphyrinogen III synthase HEM4 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931071|gb|ACD65701.1| Uroporphyrinogen III synthase HEM4 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 261
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/243 (13%), Positives = 63/243 (25%), Gaps = 29/243 (11%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-----LAMQQSYGAIAI 54
+ I TR KA K+ ++G+ P + + E + +A+ +
Sbjct: 5 KVAIYATR---KADEIANKVFELGFEPFIEDVIKIQKLPEDIIVENIKMALDKKPEVFYF 61
Query: 55 TSSESL-----STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLA---KII 106
T+ E + +N F + + G + INL + I
Sbjct: 62 TTGEGVNITFQKAKESNLYEKLKDFMESGKVFVRGYKARMVLLKEGFKDFINLESTDEFI 121
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
+ K + +L+ + + Y Q L
Sbjct: 122 EKLKNADLTNLNFFVQMYGEKLPDLNAFLLSKGASMIEVSVYKYQIDTNKMDAFIEKLIE 181
Query: 167 --ADAILFYARSSVLYFFSLPL---------PAKISAAFLCLSNNIASAIPASYKNVVTV 215
A+LF + V Y F A + + + A + V
Sbjct: 182 GFYGAVLFTSAYQVDYLFKRAEEIFKKAKLVEALNQIVVITVGHITAKKLTKYGVYKVFY 241
Query: 216 ACF 218
Sbjct: 242 PER 244
>gi|320588307|gb|EFX00776.1| uroporphyrinogen-iii synthase [Grosmannia clavigera kw1407]
Length = 320
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/272 (9%), Positives = 66/272 (24%), Gaps = 64/272 (23%)
Query: 23 GYIPVMMPLSYFIHDRESVFLAMQ------------QSYGAIAITSSESLSTL------- 63
G+ P+ +P+ D + V +YG + TS ++
Sbjct: 40 GFDPIFVPVLEHRFDDDGVAQLRDVLVRRRIASTGEVAYGGLIFTSQRAVEAFARVVAEG 99
Query: 64 -------------PANFCRHTPIFAIGEASACL----ARQKGFTQIFHGKDNSINLAKII 106
+ P +++G A+ +Q + N +LA I
Sbjct: 100 EGEGESESRSEKGAWPHLQDVPTYSVGPATTRALRAVPQQPPLQVVGDHTGNGEDLAYFI 159
Query: 107 VEQKVLFTPQKP-------LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
E + P P + D + + + Y + ++
Sbjct: 160 REHYAIAQPVTPPPPLLFLVGEKRRDVIPRVLMDPTSSRPVRVDEVVVYGTGEMPSFAAD 219
Query: 160 MKNLL-----QNADAILFYARSSVLYFFSLP---------------LPAKISAAFLCLSN 199
+ +L + ++ ++ + + S +
Sbjct: 220 LDRVLTATRDRPCRWVVVFSPTGCDRLLAGLGLLDPATGRVHGDGSPVTARSTYVATIGP 279
Query: 200 NIASAIPA-SYKNVVTVACFPKETSLLKLLPL 230
+ + A P + + +
Sbjct: 280 TTRAFLRDSFGFEPDVCADEPTPAGVSRGITR 311
>gi|261420029|ref|YP_003253711.1| uroporphyrinogen-III synthase [Geobacillus sp. Y412MC61]
gi|319766843|ref|YP_004132344.1| uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y412MC52]
gi|261376486|gb|ACX79229.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y412MC61]
gi|317111709|gb|ADU94201.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y412MC52]
Length = 264
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/246 (10%), Positives = 51/246 (20%), Gaps = 28/246 (11%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITSSESLSTLPANF 67
I+K G ++ P + E + + I T+ L
Sbjct: 15 DEMTTLIEKQGGTAIIRPAQGTVFSKGSELGEEMRTVIAMRPDWIVFTTGIGFEALLEAA 74
Query: 68 CRHTPIFAIGEASACLARQ----------KGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
R K +I K
Sbjct: 75 DREGMAAQWHRTIKEANVAARGYKTVTALKQIGVTPVAVSEDGTTKGLIAALYGHDFADK 134
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNADAILFYA 174
++ + + +E + Y + DA+ F +
Sbjct: 135 NVVVQLYGDTAPALKQFFLEQGALYTELLPYRHIAPDEETLATLYKEIVGREVDAVCFTS 194
Query: 175 RSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V +FFS L + + A+ + V + ++
Sbjct: 195 AMQVRFFFSFAREKKEIAPLLDAFRTDVVACAVGKVTKEALEEEGVDRVIAPEHERMGAM 254
Query: 225 LKLLPL 230
+ L
Sbjct: 255 IVTLAR 260
>gi|126460317|ref|YP_001056595.1| uroporphyrinogen III synthase HEM4 [Pyrobaculum calidifontis JCM
11548]
gi|126250038|gb|ABO09129.1| Uroporphyrinogen III synthase HEM4 [Pyrobaculum calidifontis JCM
11548]
Length = 204
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/230 (10%), Positives = 56/230 (24%), Gaps = 33/230 (14%)
Query: 1 MYIVITRPIK-KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M IV+ R + K G + + + + + S
Sbjct: 1 MSIVVVRIKEGKCPE--------GATCISI--GRVAPRPDVYIP----EGDYLVVMSPAV 46
Query: 60 LST--LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
L R + +G A+A + + + L ++
Sbjct: 47 AQFVDLEKIRARFKCVICVGPATAEAVGNCITPREYSSYGVAKLLKEL---------APG 97
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
++ L N L + + Y + + A A++ + +
Sbjct: 98 VVVVLRSGMGNDV----LKSLVPNVVEVPVYDIVIEPDKLESATAAIAAARAVVLTSATV 153
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
S + + ++ + + VA + +K
Sbjct: 154 AEVVASRV--DLRGKRVVAIGPVTSAKLAELGIPHI-VAPEATIEAAVKA 200
>gi|307717060|gb|ADN88583.1| uroporphyrinogen-III synthase [Listeria innocua]
Length = 165
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 53/163 (32%), Gaps = 7/163 (4%)
Query: 34 FIHDRESVFL-AMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACLARQKGFT 90
+ L Q+ + +TS+ ++ + I IGE + + G+
Sbjct: 1 IETHPNKISLSLKQKEADWLFLTSANAVEYFFNEQAGKLNYKIAVIGEKTKEKLAEYGYK 60
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
F + + E T Q ++ ED L ++ + I+ Y +
Sbjct: 61 PNFVPSVYQSEV--FLSEWLSENTSQTSILLPQSNLSRTIIEDTLTQNGHLVFPIELYET 118
Query: 151 QDIAYPETTMKNL--LQNADAILFYARSSVLYFFSLPLPAKIS 191
+T + L I+F + S+ F+++ I
Sbjct: 119 SFPENSQTILIEQLKLDEKRIIIFASPSAWKNFYTIAKQFSIK 161
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ + ++V YFF+ K++ + + V
Sbjct: 19 WLFLTSANAVEYFFNE-QAGKLNYKIAVIGEKTKEKLAEYGYKPNFVP 65
>gi|257453641|ref|ZP_05618931.1| uroporphyrinogen-III synthase [Enhydrobacter aerosaccus SK60]
gi|257449099|gb|EEV24052.1| uroporphyrinogen-III synthase [Enhydrobacter aerosaccus SK60]
Length = 262
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 76/261 (29%), Gaps = 36/261 (13%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF----LAMQQSYGAIAITS 56
M + TRP ++A + + G + +PL + +V L Y + + S
Sbjct: 1 MQFINTRPDQRAKTLSLFLHQHGVAVIDLPLLTLVEKPLTVAERAVLQSIDRYQVVVLVS 60
Query: 57 SESLSTLPAN---------FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
++ A + A+G+ +A Q +
Sbjct: 61 EAAVKYGLARLATLVKLTELSKKITWVAVGDKTANYFNQTWQQLTELPAPTVTFPGEKRA 120
Query: 108 EQKV---------LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET 158
+ L G D L + + +++ Y +
Sbjct: 121 QNNEGLLNLPVIQSLGKGDYLQVWRGIGGRELLADTLAAKGVQVHLLNLYQRVLPSATTQ 180
Query: 159 TMKNLLQ-----NADAILFYARSSVLYFFSLPLPAKISAAF--LCLSNNIASA--IPASY 209
Q +L + ++ + L +++A+ L L + IA + +
Sbjct: 181 AFAVWQQTQSHNQPIVVLISSLTAWQNWQQLTANTEMAASCYYLVLQSRIAEQMLLQPAN 240
Query: 210 KNVVTVACFPK--ETSLLKLL 228
N+ + P ++L+ L
Sbjct: 241 LNITII---PDLMPATILQAL 258
>gi|282878627|ref|ZP_06287401.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
gi|281299262|gb|EFA91657.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
Length = 264
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 66/248 (26%), Gaps = 30/248 (12%)
Query: 1 MY--IVITRPIKKALRTQEKIQKMGYIP------VMMPLSYFIHDRESVFLAMQQSYGAI 52
M I+IT P R +K ++ +D A + +
Sbjct: 1 MKKNILITAPRHYTQRLLTAFEKYKEEVEVTNIAMVESTFDTANDEMQKLCADLDMFDFV 60
Query: 53 AITSSESLSTLPANFCR-----HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
S +++ + R T AIG+ + L G T F K+ S +
Sbjct: 61 VCLSRKAIDAMHNCCDRAEQLGKTQFLAIGKDNEYLHDVLGVTPPFISKEPSPIGIAHAL 120
Query: 108 EQKVLFTPQK------PLIYLGGKPRNFHFEDYLIEHK---IPLRVIDCYYSQDIAYPET 158
++ L + + + F L E + ++ A +
Sbjct: 121 KEHGLNEGCRLAALAPAFVGIEEPRTVPDFMAKLSELGVQAHRVDAYVNMATELSARKQA 180
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPA--------KISAAFLCLSNNIASAIPASYK 210
+ + D + F + S V+ F A C+ A
Sbjct: 181 YDLIIDKRIDCVAFTSGSEVMAFNDGLREVYGTDACCILNDVAIACMGPYTAMQAKRIGL 240
Query: 211 NVVTVACF 218
V V
Sbjct: 241 KVDWVPSE 248
>gi|297530010|ref|YP_003671285.1| uroporphyrinogen III synthase HEM4 [Geobacillus sp. C56-T3]
gi|297253262|gb|ADI26708.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. C56-T3]
Length = 267
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/246 (10%), Positives = 51/246 (20%), Gaps = 28/246 (11%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITSSESLSTLPANF 67
I+K G ++ P + E + + I T+ L
Sbjct: 15 DEMTTLIEKQGGTAIIRPAQGTVFSKGSELGEEMRTVIAMRPDWIVFTTGIGFEALLEAA 74
Query: 68 CRHTPIFAIGEASACLARQ----------KGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
R K +I K
Sbjct: 75 DREGMAAQWHRTIKEANVAARGYKTVTALKQIGVTPVAVSEDGTTKGLIAALYGHDFADK 134
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL---QNADAILFYA 174
++ + + +E + Y + DA+ F +
Sbjct: 135 NVVVQLYGDTAPALKQFFLEQGALYTELLPYRHIAPDEETLATLYKEIVGREVDAVCFTS 194
Query: 175 RSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V +FFS L + + A+ + V + ++
Sbjct: 195 AMQVRFFFSFAREKKEIAPLLDAFRTDVVACAVGKVTKEALEEEGVDRVIAPEHERMGAM 254
Query: 225 LKLLPL 230
+ L
Sbjct: 255 IVTLAR 260
>gi|238028331|ref|YP_002912562.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia glumae BGR1]
gi|237877525|gb|ACR29858.1| Uncharacterized enzyme of heme biosynthesis [Burkholderia glumae
BGR1]
Length = 757
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----NADAILF 172
K ++ + G L E + ++ Y + + A L
Sbjct: 238 KRVLIVRGDGGREWLATRLREAGAEVELVAAYRRIVPEPSIGAWERVHALLGGAPHAWLV 297
Query: 173 YARSSVLYFFSLPLPAK--------ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ V L + + A + + IA A + +T + + +
Sbjct: 298 TSSEGVRNLHELAVDHLTAAEIEALLHAPLVAPHSRIADTARALGFDRITQS-GAGDERI 356
Query: 225 LKL 227
++
Sbjct: 357 VRA 359
Score = 42.1 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRE----SVFLAMQQSYGAIAITSSES 59
V+T+P ++ ++ G PL + A +Y + S +
Sbjct: 10 VLTKPEGQSAALAAQLAAAGIESFDFPLIDIAPATDFGPLDAAFARLDAYALVVFVSPNA 69
Query: 60 LSTLPANFCRHTPI 73
+ A F P
Sbjct: 70 IDRALARFGAIWPH 83
>gi|255946886|ref|XP_002564210.1| Pc22g01660 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591227|emb|CAP97454.1| Pc22g01660 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 294
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/267 (10%), Positives = 61/267 (22%), Gaps = 55/267 (20%)
Query: 19 IQKMGYIPVMMPLSYFIHDRES-----------VFLAMQQSYGAIAITSSESLSTLPANF 67
Y P +P+ + + F + YG + TS ++
Sbjct: 23 FSAHNYTPTFIPVLEHRFLKNNLTQVRDLFSTGAFNNATRKYGGLIFTSQRAVEGFAQMI 82
Query: 68 CRHT------------------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
P A + T NLA I+
Sbjct: 83 EEEKDVQFNTPTSPPLLLYTVGPATARTLTTLRDKHLPNATIHGADTGTGENLAHFILSH 142
Query: 110 KVLFTPQKP--LIYLGGKPRNFHFEDYLIEHKIPLRVID------CYYSQDIAYPETTMK 161
L++L G+ R L++ +P+ Y + + E
Sbjct: 143 YDSIYTTHKPSLLFLVGEVRRDIIPKTLMDKALPVDKRVGVEELVVYETGVMESFEGDFA 202
Query: 162 NLLQNAD---AILFYARSSVLYFFSLPL--------------PAKISAAFLCLSNNIASA 204
+++ +D ++ ++ + + +
Sbjct: 203 DVVGRSDGAVWVVVFSPTGCEAMLRVLGLGPFAGSGCGDGAAAGTRQVFVATIGPTTRDH 262
Query: 205 IPA-SYKNVVTVACFPKETSLLKLLPL 230
+ A P +L+ +
Sbjct: 263 LREKFGFEAHVCAPKPSPEGVLEGIAK 289
>gi|255589065|ref|XP_002534820.1| methylcobalamin:com methyltransferase, putative [Ricinus communis]
gi|223524521|gb|EEF27563.1| methylcobalamin:com methyltransferase, putative [Ricinus communis]
Length = 79
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLP-AKISAAFLCLSNNIASAIPASYKNVVTVAC 217
+ + + S+V + + + + + C+ ASA +
Sbjct: 1 MVLKEALICPVVAVASPSAVRAWVNFISESEQWNNSIACIGETTASAAKLLGLKNIYFPT 60
Query: 218 FPKET----SLLKLLP 229
P S+++ L
Sbjct: 61 HPGLEGWVGSIIEALK 76
>gi|111022903|ref|YP_705875.1| hypothetical protein RHA1_ro05940 [Rhodococcus jostii RHA1]
gi|110822433|gb|ABG97717.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 293
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 58/242 (23%), Gaps = 36/242 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
I +T ++A +++ G V P + + + L + + +++
Sbjct: 24 IAVT-AERRAAEFITLLERHGAAIVHTPAIHVLPVVDDTDLRSRTADIIASPPDLLVVST 82
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ A+ A + + E +
Sbjct: 83 AVGFRGWLDAARAWDEEDALLAALQSARIITRGPKAKGAVRGVGLREEWSPETESSEEVH 142
Query: 117 KPLIY---------------LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM- 160
+ L+ + L + Y + +
Sbjct: 143 EHLVAEGVRGLRVAVQLHGTITEWEPMTDLSVSLAGAGAETAAVSVYRWIRPENQQPLLT 202
Query: 161 ---KNLLQNADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPA 207
+ + DA+ F + +V S L A +C+ + AS + A
Sbjct: 203 LLDQIIRAEVDAVTFTSAPAVSSLLSTAKDTDRVEALLHAFAGPVAPVCVGSVTASPLTA 262
Query: 208 SY 209
Sbjct: 263 LG 264
>gi|85714668|ref|ZP_01045655.1| hypothetical protein NB311A_20836 [Nitrobacter sp. Nb-311A]
gi|85698553|gb|EAQ36423.1| hypothetical protein NB311A_20836 [Nitrobacter sp. Nb-311A]
Length = 278
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/249 (8%), Positives = 59/249 (23%), Gaps = 35/249 (14%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFI------HDRESVFLAMQQSYGAIAIT 55
I+I ++A + + G + P+ + + +Q + + +T
Sbjct: 11 RILILEAREEAQ-FARLLAEQGAEVLQCPMFTIRDAPDPAPVEDWIRRCIQTPHDDLVLT 69
Query: 56 SSESLS-------------TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINL 102
+ E L L A + + + L I K S +
Sbjct: 70 TGEGLRRLITAARRIGLDQALIAAIGKSRTLARGPKPGKALREIGLEAAITTDKPTSEGI 129
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
++ + + + L + + + + + Y A +
Sbjct: 130 SETLARFDLQDHRVG--LQLYPDRDHTALLEKIKRQGASVDPVLPYVYDAGAAEANIIGA 187
Query: 163 LLQ----NADAILFYARSSVLYFFSLPLPA---------KISAAFLCLSNNIASAIPASY 209
+ + DAI + V + + ++ +
Sbjct: 188 IDEMADGRVDAIALTSSGQVRRLMEVARIHRCEERLRAGLDRTKIASVGPVVSDELKTYG 247
Query: 210 KNVVTVACF 218
Sbjct: 248 LRTDITPAN 256
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 25/108 (23%), Gaps = 13/108 (12%)
Query: 136 IEHKIPLRVIDCYYSQDIAYP---ETTMKNLLQ-NADAILFYARSSVLYFFSLPLPAKIS 191
E + + +D P E ++ +Q D ++ + + +
Sbjct: 28 AEQGAEVLQCPMFTIRDAPDPAPVEDWIRRCIQTPHDDLVLTTGEGLRRLITAARRIGLD 87
Query: 192 AAFLCL---------SNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
A + A+ P + + L
Sbjct: 88 QALIAAIGKSRTLARGPKPGKALREIGLEAAITTDKPTSEGISETLAR 135
>gi|310644474|ref|YP_003949233.1| uroporphyrinogen iii synthase hem4 [Paenibacillus polymyxa SC2]
gi|309249425|gb|ADO58992.1| Uroporphyrinogen III synthase HEM4 [Paenibacillus polymyxa SC2]
Length = 285
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 53/242 (21%), Gaps = 33/242 (13%)
Query: 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPA 65
A + KMG PV P + + + L T+ L L
Sbjct: 18 AEEMALLVMKMGGEPVERPAQGTVFL-DDIELRNAVVSWVKNPPDWYIFTTGMGLDALFD 76
Query: 66 NFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ K +D +L +
Sbjct: 77 MAEDMGVAEQIIELLQSSNIAARGYKTVNGLKKRGFTPAVRDEDGSLIGLTRAFAPYDLK 136
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL---LQNADAILF 172
K ++ ++L E R + Y + + DA+ F
Sbjct: 137 GKEVLLQLHGDPAPRLVEWLDEQGAVTRQVLPYKHIPPEEAKLQALLDDVINRTIDAVTF 196
Query: 173 YARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ + + L + + + A +I + P E
Sbjct: 197 TSGPQIRFLAQYAREQNRFEDLLEAFREDVIAVSVGKVTAQSILEEGIERIVF---PTEE 253
Query: 223 SL 224
+
Sbjct: 254 RM 255
>gi|47076743|dbj|BAD18288.1| unknown conserved protein [Geobacillus stearothermophilus]
Length = 264
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/246 (10%), Positives = 54/246 (21%), Gaps = 28/246 (11%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITSSESLSTLPANF 67
I+K G ++ P + E + + I T+ L
Sbjct: 15 DEMTTLIEKQGGTAIIRPAQGTVFSKGSELGEEMRTVIAMRPDWIVFTTGIGFEALLEAA 74
Query: 68 CRHTPIFAIGEASACLARQ----------KGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
R K +I +K
Sbjct: 75 DREGMAAQWHRTIKEANVAARGYKTVTALKQIGVTPVAASEDGTTKGLIAALYGHDFAEK 134
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET---TMKNLLQNADAILFYA 174
++ + + +E + Y + + + DA+ F +
Sbjct: 135 NVVVQLYGDTAPALKQFFLEQGALYTELLPYRHIAPDEETLATLYKEIVGREVDAVCFTS 194
Query: 175 RSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V +FFS L + + A+ + V + ++
Sbjct: 195 AMQVRFFFSFAREKKEIAPLLDAFRTDVVACAVGKVTKEALEEEGVDRVIAPEHERMGAM 254
Query: 225 LKLLPL 230
+ L
Sbjct: 255 IVTLAR 260
>gi|167753933|ref|ZP_02426060.1| hypothetical protein ALIPUT_02218 [Alistipes putredinis DSM 17216]
gi|167658558|gb|EDS02688.1| hypothetical protein ALIPUT_02218 [Alistipes putredinis DSM 17216]
Length = 273
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 56/218 (25%), Gaps = 17/218 (7%)
Query: 20 QKMGYIPVMMPLSYFIHDRESVFLAM---QQSYGAIAITSSESLSTLPANF-------CR 69
QK MP + F + ++ A+ TS ++ +
Sbjct: 12 QKHKAEIEYMPFIRVVGVSLKEFRSQRVEILAHTAVIFTSRTTVDSFFHICEEARITVPE 71
Query: 70 HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNF 129
EA A ++ + + I ++ + +P
Sbjct: 72 TMKYICQTEAVALYLQKYIVYRKRKISFADGSFTNFIELIIKH--KEEKFMLALSEPHKP 129
Query: 130 HFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAK 189
+ L + K+ + + + +K D + Y+ S V +
Sbjct: 130 ELPETLAKLKLQFSPVILARTVAADLNDLDIK----KFDLLALYSPSDVKAILERFPAEE 185
Query: 190 ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ A A V +A P S+ K
Sbjct: 186 LPA-VATFGEGTLRAAVDVGIKVKAMAPTPTVPSMAKA 222
>gi|307717046|gb|ADN88576.1| uroporphyrinogen-III synthase [Listeria innocua]
Length = 165
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 54/164 (32%), Gaps = 7/164 (4%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACLARQKGF 89
+ S+ L + + +TS+ ++ + I IGE + + G+
Sbjct: 1 IETHPKKISLSLNQ-KEADWLFLTSANAVEYFFNEQAGKLNYKIAVIGEKTKEKLAEYGY 59
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
F + + E T Q ++ ED L ++ + I+ Y
Sbjct: 60 KPNFVPSVYQSEVI--LSEWLSENTSQTSILLPQSNLSRTIIEDTLTQNGHLVFPIELYE 117
Query: 150 SQDIAYPETTMKNL--LQNADAILFYARSSVLYFFSLPLPAKIS 191
+ +T + L I+F + S+ F+++ I
Sbjct: 118 TSFPENSQTILIEQLKLDEKRIIIFASPSAWKNFYTIAKQFSIK 161
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + ++V YFF+ K++ + + V + +L
Sbjct: 19 WLFLTSANAVEYFFNE-QAGKLNYKIAVIGEKTKEKLAEYGYKPNFVPSVYQSEVILS 75
>gi|226326701|ref|ZP_03802219.1| hypothetical protein PROPEN_00554 [Proteus penneri ATCC 35198]
gi|225204922|gb|EEG87276.1| hypothetical protein PROPEN_00554 [Proteus penneri ATCC 35198]
Length = 48
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 17/47 (36%)
Query: 182 FSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+L ++ + +S +A+ +TVA +L L
Sbjct: 1 MNLKKAWLLNCHLIVVSERLATIAKTLGWETITVAESANNDALFHAL 47
>gi|325067209|ref|ZP_08125882.1| Uroporphyrinogen III synthase HEM4 [Actinomyces oris K20]
Length = 97
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 24/73 (32%)
Query: 155 YPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVT 214
P+ + DA++ A S+ L P + + A+A V
Sbjct: 6 PPDLEHRWATGGVDAVVLTAPSTTRAVLELLGPPPQGTGLVAIGATTAAATRELGLTVAA 65
Query: 215 VACFPKETSLLKL 227
VA P +L+
Sbjct: 66 VAPSPTPEGVLQA 78
>gi|289677627|ref|ZP_06498517.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. syringae
FF5]
Length = 140
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 11/116 (9%), Positives = 34/116 (29%), Gaps = 5/116 (4%)
Query: 104 KIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL 163
++ ++ + P ++ + G + L + + + Y + +
Sbjct: 1 ELPRLKQAIAVPGSRVLIMRGDEGRELLAEQLRGLGVGVDYLPLYRRYLPQHAPGALAQR 60
Query: 164 L--QNADAILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
+ + + ++ + + L P S +AS A+ V
Sbjct: 61 VAVERLNGLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIARAAGARTVI 116
>gi|327398183|ref|YP_004339052.1| Uroporphyrinogen III synthase HEM4 [Hippea maritima DSM 10411]
gi|327180812|gb|AEA32993.1| Uroporphyrinogen III synthase HEM4 [Hippea maritima DSM 10411]
Length = 286
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKI-SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ ++ ++F ++ +V +FF P + + + + A A+ + V
Sbjct: 107 MDNSSKWVVFTSKRAVEFFFKRINPRCLCNKSIAAIGEKTALALKDKGFQLDYVPEEYYS 166
Query: 222 TSLLKLLPLR 231
+SL++ L +
Sbjct: 167 SSLIEFLKDK 176
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 51/193 (26%), Gaps = 21/193 (10%)
Query: 41 VFLAMQQSYGAIAITSSESLSTLPANFCRHTPIF----AIGEASACLARQKGFTQIFHGK 96
+ M S + TS ++ AIGE +A + KGF + +
Sbjct: 103 IDFIMDNSSKWVVFTSKRAVEFFFKRINPRCLCNKSIAAIGEKTALALKDKGFQLDYVPE 162
Query: 97 DNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP 156
+ + ++ K L Y + + ++V+ Y +
Sbjct: 163 EYYSSSLIEFLKDKEDVLVITALKY-----------NKAYDELKNVKVLPVYENYIPDEI 211
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS---AAFLCLSNNIASAIPASYKNVV 213
+ D LF + S+ + + + + S I +
Sbjct: 212 KYF--KPEGEFDFGLFSSPSAFWHIKEAFGSYDFAKRIKRIIAIGKTTKSYINSCGFEA- 268
Query: 214 TVACFPKETSLLK 226
+ K
Sbjct: 269 ETPNKATIGEMFK 281
>gi|296122535|ref|YP_003630313.1| uroporphyrinogen III synthase HEM4 [Planctomyces limnophilus DSM
3776]
gi|296014875|gb|ADG68114.1| Uroporphyrinogen III synthase HEM4 [Planctomyces limnophilus DSM
3776]
Length = 291
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 18/240 (7%), Positives = 47/240 (19%), Gaps = 31/240 (12%)
Query: 11 KALRTQEKIQKMGYIPVMMP-LSYFIHDRESVFL-----AMQQSYGAIAITSSESLSTLP 64
+ I++MG + + P + + + + + L
Sbjct: 31 RGEEMASLIERMGGLATIAPSMREISLGENPEAFRFGERLLNHEFRLMVFLTGVGARALL 90
Query: 65 ANF------------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
G + R+ G + + +
Sbjct: 91 EVLETRFPRDEILAAWDRCVTIVRGPKPHAVLREWGVHVDARAPEPNTWRELLSTLDDWG 150
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN----AD 168
+ N + L + + + Y + D
Sbjct: 151 ALQSVSMAVQEYGQPNELLYEELQQRGAIVTRVPVYRWALPEDLNPLENAIRTCVRGEFD 210
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFL---------CLSNNIASAIPASYKNVVTVACFP 219
A+L+ + V + + + FL + + P
Sbjct: 211 ALLWTSAQQVHHVLEVADRMGLKIQFLQAANRCVIGSIGPTATETLIEQGLAPDLEPEHP 270
>gi|296332685|ref|ZP_06875145.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305673029|ref|YP_003864701.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149965|gb|EFG90854.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305411273|gb|ADM36392.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 481
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/224 (10%), Positives = 54/224 (24%), Gaps = 14/224 (6%)
Query: 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESLSTLPANFC 68
+ +K++ G + P + + L ++ I TS ++
Sbjct: 263 EDEDPLADKLRASGADVIEWPKWRTENMPVNEEILRKIGTFEDIFFTSHHAVCEFFQALT 322
Query: 69 RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
L I + ++
Sbjct: 323 SKKIDIRQL----TARLSATSEHAETELKKRGFLISAIQPDSEKRLVVGSRHAVENIQKH 378
Query: 129 FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA 188
Y+ + + E+ + ++ + S+ P P+
Sbjct: 379 ESCSFYITHE--NVIDDRFTHMIQRTISESPLHMIICPSKPSTQQLISAGEQIGISPEPS 436
Query: 189 KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+C+S+N SA A V + L L+ ++
Sbjct: 437 ASRPPIVCISDN--SAAGAYGFTAVQE-----QDELFALIQNQQ 473
>gi|307717086|gb|ADN88596.1| uroporphyrinogen-III synthase [Listeria innocua]
Length = 165
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 7/163 (4%)
Query: 34 FIHDRESVFL-AMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACLARQKGFT 90
+ + L Q+ + +TS+ ++ + I IGE + + G+
Sbjct: 1 IETHPKKISLSLKQKEADWLFLTSANAVEYFFNEQADKLNYKIAVIGEKTKEKLAEYGYK 60
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
F + E T Q ++ ED L ++ + I+ Y +
Sbjct: 61 PNFVPSVYQS--EIFLSEWLSENTSQTSILLPQSNLSRTIIEDTLTQNGHLVFPIELYET 118
Query: 151 QDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPLPAKIS 191
+T + LQ I+F + S+ F+ + I
Sbjct: 119 SFPENSQTILIEQLQLEEKRIIIFASPSAWKNFYMIAKQFSIK 161
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ + ++V YFF+ K++ + + V
Sbjct: 19 WLFLTSANAVEYFFNE-QADKLNYKIAVIGEKTKEKLAEYGYKPNFVP 65
>gi|302695803|ref|XP_003037580.1| hypothetical protein SCHCODRAFT_47169 [Schizophyllum commune H4-8]
gi|300111277|gb|EFJ02678.1| hypothetical protein SCHCODRAFT_47169 [Schizophyllum commune H4-8]
Length = 286
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 69/231 (29%), Gaps = 41/231 (17%)
Query: 39 ESVFLAMQQSYGAIAITSSESLSTLPANFCRH-----------TPIFAIGEASA------ 81
++ + + +TSS + + +H TP +A+G A+A
Sbjct: 48 DAAIRERASEFDGVIVTSSRACEAWKRSLTKHADSSHIDGWATTPFYAVGRATAVALRTI 107
Query: 82 ----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIE 137
R + G+ + + + I + L+YL G L E
Sbjct: 108 ADSPAAPRDIRGEESGTGEQLARFIVEDIRKDDAERGHPARLLYLTGDKNRDTVPSILTE 167
Query: 138 HKIPLRVIDCYYSQDIAYPETTMKNLLQN------ADAILFYARSSVLYFFSLPLP---- 187
I + Y + E + L + ++F+A SS +
Sbjct: 168 AGISFEPLQVYGTCGAPDFEQRLDEALADLPSDTTEQWVVFFAPSSTDFALPYLHERFEL 227
Query: 188 ---------AKISAAFLCLSNNIASAI-PASYKNVVTVACFPKETSLLKLL 228
+ +A + + I + +V VA P L++ +
Sbjct: 228 RREVASLSGTQKAARIAAIGPMSSEHISRERHLHVDAVASKPSPAQLVEAI 278
>gi|90425639|ref|YP_534009.1| uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
BisB18]
gi|90107653|gb|ABD89690.1| Uroporphyrinogen III synthase HEM4 [Rhodopseudomonas palustris
BisB18]
Length = 280
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/269 (8%), Positives = 60/269 (22%), Gaps = 41/269 (15%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYF------IHDRESVFLAMQQSYGAIA 53
I+I TR + + + G + P+ + + Q + +
Sbjct: 9 RILILETREEAQ---FARLLTEQGAAVLQCPMFAIHDAPDPAPVEAWIRRCIAQPFDDLV 65
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+T+ E L L R + A + A I+ E
Sbjct: 66 LTTGEGLRRLVKAARRIELGEPLIAAIGQSRSFARGPKPGRALREIGLEASIVTEVPTSE 125
Query: 114 TPQKPLIYL-----------GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
L + + + + + Y A +
Sbjct: 126 GIAATLKAVDLRGRRLGLQLYPDKDHSVLIAAITAGGASVDPVLPYVYDARAAESNVLAA 185
Query: 163 LLQNADAIL----FYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASY 209
+ A + + + + A + + ++ + +
Sbjct: 186 IDAMAAGSIDALALTSSGQIRRLIDVARAHHCEPRLREALAATPIASVGPVVSEELKSYG 245
Query: 210 KNVVTVAC------FPKETSLLKLLPLRR 232
P +++ L R+
Sbjct: 246 LRTDIYPANDAFFMKPLISAMATALNARK 274
>gi|288554136|ref|YP_003426071.1| methyltransferase/uroporphyrinogen-III synthase [Bacillus
pseudofirmus OF4]
gi|288545296|gb|ADC49179.1| methyltransferase/uroporphyrinogen-III synthase [Bacillus
pseudofirmus OF4]
Length = 488
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/224 (10%), Positives = 59/224 (26%), Gaps = 17/224 (7%)
Query: 13 LRTQEKIQKMGYIPVMMP-LSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
+ ++K+G P L+ + ++ + Y I S +++ T
Sbjct: 266 KEAAQHLRKLGADVYEHPKLTEYSTCLDNEVFEDIEHYEEIVFYSPKAVQTFLKEVGERE 325
Query: 72 PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHF 131
A + + T + H ++ E + ++ L+ +
Sbjct: 326 MDLRTLNACFYASNDETKTALRHAGH-------LVQEWVGIHEWKRALVIGSEIELDQSS 378
Query: 132 EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS-VLYFFSLPLP--- 187
+ + C + ++ M+ N I + ++ FF L
Sbjct: 379 PLQATKW---VIAEKCVTNGEVTALSRLMEEGHVNTLIITSENEAQKLIAFFKLTGQSTA 435
Query: 188 -AKISAAFLCLSNNIASAIPASYKNVVTV-ACFPKETSLLKLLP 229
+C+ + + V + L
Sbjct: 436 EWSNKLRVICMGPAASKRLAEIGLIADHVLDEESTTEEIALALA 479
>gi|310817091|ref|YP_003965055.1| uroporphyrinogen-III synthase, putative [Ketogulonicigenium vulgare
Y25]
gi|308755826|gb|ADO43755.1| uroporphyrinogen-III synthase, putative [Ketogulonicigenium vulgare
Y25]
Length = 227
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 82/230 (35%), Gaps = 17/230 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMM--PLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+++TRP+ A R + +G + P+ + + + A+ +TS
Sbjct: 5 LLLTRPLGAAQRF---LDGLGVETPHLISPIMRIVPL----TPQVLRVPKALVLTSENGA 57
Query: 61 STLPA-NFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ L + P + +G +A +AR G I G D A ++ + + P
Sbjct: 58 AALARLDLPPGLPAWCVGLRTAEVARANGADAIVAGPD-----AAHLLPRILAEGGNGPF 112
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
++L G L + Y QD + L N A + S
Sbjct: 113 LHLRGAHVAADVAVALQSAGRVCDALVVYDQQDCPLSPAALA--LLNGTAPVVLPLFSPR 170
Query: 180 YFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ +A + ++ + A+A A V VA P+ +++ +L+
Sbjct: 171 SAALVAKAGPFAAPLIIVAISPAAAALAPSAAKVYVAPTPELSAMQRLVA 220
>gi|307717026|gb|ADN88566.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 7/159 (4%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC--RHTPIFAIGEASACLARQKGF 89
+ S+ + + +TS+ ++ N H I IGE + + G+
Sbjct: 1 IKTRPKKISLSREQLE-AEWLFLTSANAVEYFFMNQPGEAHYKIAVIGEKTREKLAEYGY 59
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
F + E + ++ +D L E + ++ Y
Sbjct: 60 NPSFVPSIYQS--EMFLEEWLNENPEKTSVLLPQSNLSRSIIKDTLTEKGYLVHSVELYE 117
Query: 150 SQDIAYPETTMKNLLQNA--DAILFYARSSVLYFFSLPL 186
+ + + LL + I+F + S+ F+S+
Sbjct: 118 TVFPENSKIKLAELLNSNDTHIIIFASPSAWKNFYSIAK 156
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + ++V YFF + P + + + N V + L+
Sbjct: 19 WLFLTSANAVEYFF-MNQPGEAHYKIAVIGEKTREKLAEYGYNPSFVPSIYQSEMFLE 75
>gi|218661688|ref|ZP_03517618.1| uroporphyrinogen-III synthase [Rhizobium etli IE4771]
Length = 65
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 169 AILFYARSSVLYFFSLPL-----PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
A+LFY+R + FF L + LCLS +A AIPAS K V ++ P E S
Sbjct: 1 AVLFYSRQTAEDFFQLAELRSALSEQGGIRLLCLSEAVAQAIPASLKETVAISSMPDEIS 60
Query: 224 LLKLL 228
LL LL
Sbjct: 61 LLSLL 65
>gi|320533618|ref|ZP_08034252.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320134166|gb|EFW26480.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 129
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 4/104 (3%)
Query: 128 NFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT----MKNLLQNADAILFYARSSVLYFFS 183
+ D L + + + Y + + D ++ A SS
Sbjct: 7 DPALADRLRQAGWEVEQVAAYTTITADAHDLPPGLERAWAAGGVDMVVLTAPSSTRAVLD 66
Query: 184 LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
L P + + A+A V VA P +L+
Sbjct: 67 LLGPPPRGTGLVAIGATTAAATRGLGLPVAAVASSPTPEGVLQA 110
>gi|167561972|ref|ZP_02354888.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia oklahomensis EO147]
Length = 529
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 33/129 (25%), Gaps = 13/129 (10%)
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----N 166
K ++ + G + L + + ++ Y + +
Sbjct: 11 AADLAGKRVLIVRGDGGREWLAERLRDAGAEVELVAAYRRVTPEPSIGAWERVHALLSGA 70
Query: 167 ADAILFYARSSVLYFFSLPLPAK--------ISAAFLCLSNNIASAIPASYKNVVTVACF 218
A L + V L A F+ I A + +T++
Sbjct: 71 PHAWLVTSSEGVRNLQELAHEHLNEAEIDALKHAQFVAPHPRIVETARALGFDRITLS-G 129
Query: 219 PKETSLLKL 227
+ +++
Sbjct: 130 AGDERIVRA 138
>gi|288962888|ref|YP_003453182.1| uroporphyrinogen-III synthase [Azospirillum sp. B510]
gi|288915154|dbj|BAI76638.1| uroporphyrinogen-III synthase [Azospirillum sp. B510]
Length = 281
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/262 (11%), Positives = 70/262 (26%), Gaps = 36/262 (13%)
Query: 2 YIVITRPIK-KALRTQEKIQKMGYIPVMMPLSYFIHDRESV------FLAMQQSYGAIAI 54
I++ P +++ G + P+ + + + + + I +
Sbjct: 12 RILV--PESRDLDLFAGMMEQHGAETIRCPMVKILDLDDPAPARAWLERLLAEGFDDIVL 69
Query: 55 TSSESLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINL 102
+ E L L A +F G R+ G + +
Sbjct: 70 LTGEGLRRLMAAARAMGREAEVIAAIGRARVFVRGPKPVKALREIGCAPYKSAPAPTSDG 129
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT--M 160
++ ++ L + + P + E P+ V Y+ D +
Sbjct: 130 VIAMLAEEELVGRRVGVQLYPDNPNDGLLEAVRARGGDPVAVTPYRYANDSETGAVQTAI 189
Query: 161 KNLLQNADAIL-FYARSSVLYFFSLPLPAKI---------SAAFLCLSNNIASAIPASYK 210
+++ + F A V + + + +A A+ A+
Sbjct: 190 RDMADGRIDFVAFTASPQVRRLREVAEAHGLGDAFRQGLARTRIAAVGPVVAEAVEAAGG 249
Query: 211 NVVTVACFPK--ETSLLKLLPL 230
V V+ L+ +
Sbjct: 250 T-VAVSPNSTFHMKPLVNAIRR 270
>gi|302915369|ref|XP_003051495.1| hypothetical protein NECHADRAFT_37766 [Nectria haematococca mpVI
77-13-4]
gi|256732434|gb|EEU45782.1| hypothetical protein NECHADRAFT_37766 [Nectria haematococca mpVI
77-13-4]
Length = 313
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/235 (10%), Positives = 57/235 (24%), Gaps = 52/235 (22%)
Query: 47 QSYGAIAITSSESLSTLP--------------------ANFCRHTPIFAIGEASACL--- 83
YG + TS ++ +H P++++G A+
Sbjct: 71 HEYGGLIFTSQRAVEAFVKLVQDGKDENDSIKNDPPTSWPHLQHIPVYSVGPATTRALAA 130
Query: 84 -ARQKGFTQIFHGKDNSINLAKIIV----EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEH 138
+ + N LA I+ E P+++L G+ R L +
Sbjct: 131 VPQDPPLSVFGSHTGNGATLAPYILSHYREWHAGRPSLPPVLFLVGETRRDIIPKTLQDP 190
Query: 139 KIP------LRVIDCYYS-----QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLP 187
+P + Y + I + A ++ ++ + +
Sbjct: 191 GLPDGERIAVDETVVYGTGVMESFPIDLDRVLSETQDAPARWVVVFSPTGCDSLLQVMGV 250
Query: 188 AKI-------------SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + + A P +L +
Sbjct: 251 LDPETGKVREGSVRDGKTYVATIGPTTRDHLKSFGFEPDVCAESPTPQGVLDGIQ 305
>gi|226365410|ref|YP_002783193.1| hypothetical protein ROP_60010 [Rhodococcus opacus B4]
gi|226243900|dbj|BAH54248.1| hypothetical protein [Rhodococcus opacus B4]
Length = 277
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/269 (11%), Positives = 68/269 (25%), Gaps = 41/269 (15%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
I +T ++A +++ G V P + + + L + + +++
Sbjct: 11 IAVT-AERRAAEFITLLERHGAAIVHTPAIHVLPLVDDSDLRARTADLIASPPDLLVVST 69
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ A+ A + + + + +
Sbjct: 70 AVGFRGWLDAARAWDEEDALLTALQSARIITRGPKAKGAVRGAGLREEWSPDTESSEEVH 129
Query: 117 KPLIYL---------------GGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM- 160
+ L+ L + Y +
Sbjct: 130 EHLVAQGVRGLRVAVQLHGTITEWEPMTDLSVSLAGAGADTTAVSVYRWIRPENQQPLST 189
Query: 161 ---KNLLQNADAILFYARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPA 207
+ + DA+ F + +V S L A +C+ AS +
Sbjct: 190 LLDRIIRAEVDAVTFTSAPAVSSLLSTAKDTDRVDALLHAFHGPVAPVCVGAVTASPLTV 249
Query: 208 SYKNVVTVACFPKETSL----LKLLPLRR 232
+ + A P+ SL ++ LP RR
Sbjct: 250 LGVDTMQPA-RPRLGSLAKYIIEELPKRR 277
>gi|189183415|ref|YP_001937200.1| hypothetical protein OTT_0508 [Orientia tsutsugamushi str. Ikeda]
gi|189180186|dbj|BAG39966.1| hypothetical protein OTT_0508 [Orientia tsutsugamushi str. Ikeda]
Length = 227
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 78/237 (32%), Gaps = 25/237 (10%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R I++ Q ++ + PL + + + I ITS +
Sbjct: 5 KLLLIRTIEENKLLQSRLVGK-FTICNCPLINYEVIKSDY--SKISQGQNIVITSKFAAK 61
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
+ N + F +G+ S+ + +Q F ++ + L I E K +IY
Sbjct: 62 IIAENMNSNVNCFVVGQVSSQILQQNKFIRVVGVYNTVEKLLLNISEV-------KNIIY 114
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLLQNADAILFYARSS-- 177
G ++ + Y + E + L L Y+ ++
Sbjct: 115 YCGNYITHDPPNHWTKK-------IVYLVKYAQDLTDEAKINLSLSQISHSLIYSYNAGL 167
Query: 178 ---VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
L + L + +C+S+ + S V+ P +++K+L
Sbjct: 168 NLIKLLKKNKLLWTLQNVRIICISSKVGSLFTKI-AKKVSFPTTPTSKNMIKILLNH 223
>gi|307717032|gb|ADN88569.1| uroporphyrinogen-III synthase [Listeria seeligeri]
Length = 165
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 45/162 (27%), Gaps = 3/162 (1%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
+ VF + QQ+ I TS ++ P + + +
Sbjct: 1 IETKPQKV-VFTSEQQNVEWIFFTSVNAVEYFFKQHKVTKPYKYAVIGEKTKEKLADYGR 59
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ E + + ++ ED L E + ++ Y +
Sbjct: 60 SPSFIPTLYQTEPFLSEWLEKYPEKTSILLPKSNLSRTVMEDTLKEKGYVIFPVELYETI 119
Query: 152 DIAYPETTMKNLLQNA--DAILFYARSSVLYFFSLPLPAKIS 191
++ +K I+F + S+ F+S+
Sbjct: 120 FPNKSKSLLKQFFAQNEKQIIIFASPSAWKNFYSVAKNFPSQ 161
>gi|300713088|ref|YP_003738900.1| uroporphyrinogen-III synthase [Halalkalicoccus jeotgali B3]
gi|299126772|gb|ADJ17109.1| uroporphyrinogen-III synthase [Halalkalicoccus jeotgali B3]
Length = 156
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 32/129 (24%), Gaps = 10/129 (7%)
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+VE + + L + Y + ++ +
Sbjct: 13 LVEALADKISGSTVEIARSANGSNVLPQGLESAGADVHETQLYQLEKPETAGQSVSLAID 72
Query: 166 NA-DAILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVVTV 215
D +LF + +V +FF + A + A AI + V +
Sbjct: 73 GQLDGVLFTSSRTVDHFFEIATEQADVTELKRGLEEAVVGAIGAPTARAIRDNGLEVDII 132
Query: 216 ACFPKETSL 224
L
Sbjct: 133 PESVDFEQL 141
>gi|226533580|ref|NP_001145235.1| hypothetical protein LOC100278507 [Zea mays]
gi|195653353|gb|ACG46144.1| hypothetical protein [Zea mays]
Length = 297
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 51/254 (20%), Gaps = 41/254 (16%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRES-----VFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
+++ G PV +P + + + A+A TS +S
Sbjct: 35 ALLRQRGAHPVAVPTIAVHPHDPDRLRPYLLPSALDPFAALAFTSRSGISAFARALSSSH 94
Query: 72 PIFAIG---EASACL--------ARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP-- 118
+ + L + L
Sbjct: 95 RPLSHASALPFTVAALGSDADLLDHAFLSRLCGDAGTRVSVLVPDVPTPAGLVEALGRGS 154
Query: 119 ----------LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD--IAYPETTMKNLLQN 166
++ L P F L Y + E +
Sbjct: 155 GRRVLCPVPDVVGLREPPVVPDFLAGLEAAGWVAVRAPAYTTCWAGPRCAEALVDPDAAP 214
Query: 167 ADAILFYARSSVLYFFSLPLPAKISAA----------FLCLSNNIASAIPASYKNVVTVA 216
DA++F + + V + A A + V V+
Sbjct: 215 LDAVVFTSTAEVEGLLKGLEAVGWTWARLAARWPGMVVAAHGPVTAGGARSLGVEVDIVS 274
Query: 217 CF-PKETSLLKLLP 229
++ L
Sbjct: 275 TRFSSFHGVVDALA 288
>gi|327493889|gb|AEA86531.1| uroporphyrinogen-III synthase [Euglena gracilis]
Length = 228
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 8/181 (4%)
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI-NLAKIIVEQKVLFTP 115
+E ++ R P+F +G + R+ GF + L ++++
Sbjct: 41 AEGVAASREQLLRDFPVFGVGPRTCGALRKLGFRNVTGDDTGEATQLGPMVIDFWRSHLQ 100
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL----LQNADAIL 171
+ L+ L G + IP I Y + + A E + L +D +
Sbjct: 101 PRKLLLLRGDKALETLPLLFTQAAIPFDGIVTYNTLEGASEEAIQQLRAIPGLGTSDWVG 160
Query: 172 FYARSSVLYFFSLPL--PAKISAAFLCLSNNIASAIPASYKNVV-TVACFPKETSLLKLL 228
++ S V +L P + ++AI V VA P LL +
Sbjct: 161 LFSPSGVRAVAALRRGVPGFDHVRKASIGKTTSAAIEKELGEVAEAVAEKPNPEKLLDAI 220
Query: 229 P 229
Sbjct: 221 Q 221
>gi|307717036|gb|ADN88571.1| uroporphyrinogen-III synthase [Listeria seeligeri]
gi|307717066|gb|ADN88586.1| uroporphyrinogen-III synthase [Listeria seeligeri]
gi|307717102|gb|ADN88604.1| uroporphyrinogen-III synthase [Listeria seeligeri]
gi|307717106|gb|ADN88606.1| uroporphyrinogen-III synthase [Listeria seeligeri]
Length = 165
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 45/162 (27%), Gaps = 3/162 (1%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
VF + QQ+ I TS ++ P + +
Sbjct: 1 IETKPQNV-VFTSEQQNVEWIFFTSVNAVEYFFKQHKVTKPYKYAVIGEKTKEKLADYGH 59
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ + E + + ++ ED L E + ++ Y +
Sbjct: 60 LPSFIPTLYQTEPFLSEWLEKYPEKTSILLPKSNLSRTVMEDTLKEKGYVIFPVELYETI 119
Query: 152 DIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPAKIS 191
++ +K L I+F + S+ F+S+
Sbjct: 120 FPTKSKSLLKQLFTQNENQIIIFASPSAWKNFYSVAKNFPSQ 161
>gi|300741886|ref|ZP_07071907.1| uroporphyrinogen-III synthase [Rothia dentocariosa M567]
gi|300381071|gb|EFJ77633.1| uroporphyrinogen-III synthase [Rothia dentocariosa M567]
Length = 299
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 68/292 (23%), Gaps = 67/292 (22%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYI-------PVMMPLS--YFIHDRESVF----LAMQQS 48
+++TR + + + + P+ + S+F LA + +
Sbjct: 3 RVLLTRTAAQGAPFERALNDLAAERGIPKIQVDFAPMQLPRTVAPEYSLFSLVSLAAEGA 62
Query: 49 YGAIAITSSESLS---------TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNS 99
+ TS+ ++ A T I +G A+A R+ G F +
Sbjct: 63 FLWATFTSANAVRSCAELFGTSFAWALRDGGTRIACVGSATARALREIGLEPHFMPEKQD 122
Query: 100 I--NLAKIIVE-------------------------QKVLFTPQKPLIYLGGKPRNFHFE 132
LA+ E + + Q ++ G
Sbjct: 123 ALGMLAEFPTEGANPELGIPESLRKPQNTPESAALGWDDMLSAQANVLVFEGANARPTLR 182
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPE---------------TTMKNLLQNADAILFYARSS 177
+ L+ Y + + D I+ A S
Sbjct: 183 EGLVGLGFRAVRAVVYEMVSATASALEAGELSCVNARELIAGIGSNSAAVDVIVATAPSR 242
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + + A A P +L L
Sbjct: 243 LKELVGENPNPERIPPVAAIGRTTARMCEDLGLRH-RTADSPTPEAL--ALA 291
>gi|330929735|ref|XP_003302756.1| hypothetical protein PTT_14692 [Pyrenophora teres f. teres 0-1]
gi|311321687|gb|EFQ89151.1| hypothetical protein PTT_14692 [Pyrenophora teres f. teres 0-1]
Length = 308
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/270 (11%), Positives = 67/270 (24%), Gaps = 62/270 (22%)
Query: 21 KMGY-IPVMMPLSYFIHDRE---------------SVFLAMQQSYGAIAITSSESLSTL- 63
G+ PV +P+ ++ YGA+ TS ++
Sbjct: 32 DNGHYAPVFVPVLEHRFKQDALSEVRHHVTSRGFVPQSQQGLAIYGALVFTSQRAVEAFS 91
Query: 64 --------------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIV 107
P++ +G A+A R G G++ N LA I+
Sbjct: 92 AVVEEIRKQGAVDIDDLLPESLPLYVVGPATARGLRSLGLKCPILGEETGNGEALAGFIL 151
Query: 108 EQKVL---FTPQKPLIYLGGKPRNFHFEDYLIE------HKIPLRVIDCYYSQDIAYPET 158
TP P++++ G R L + + + Y + ++ +
Sbjct: 152 RHYNAMHPDTPNPPVLFMVGDKRRDIIPKTLQAPELEPNTRARVDELVIYETGEMQSFKQ 211
Query: 159 TMKNLLQN-------ADAILFYARSSVLYFFSLPL------------PAKISAAFLCLSN 199
+N ++ ++ S +
Sbjct: 212 DFTATWRNNAEQGSNHQWVVVFSPSGCKAMLESLGLLDPETGRTKSATDPRDILIATIGP 271
Query: 200 NIASAI-PASYKNVVTVACFPKETSLLKLL 228
+ A P + + +
Sbjct: 272 TTRDYLVQEFGFTPDVCAEKPSPEGIAEGI 301
>gi|119871635|ref|YP_929642.1| uroporphyrinogen III synthase HEM4 [Pyrobaculum islandicum DSM
4184]
gi|119673043|gb|ABL87299.1| Uroporphyrinogen III synthase HEM4 [Pyrobaculum islandicum DSM
4184]
Length = 215
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 44/190 (23%), Gaps = 18/190 (9%)
Query: 33 YFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQI 92
I + V Y I S L + + +G ++A +
Sbjct: 28 RIIPRPDVVI--PDGDYLVIMSPSVAYSINLSNVVKKFKCVICVGPSTAEAVGNCIVPRE 85
Query: 93 FHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD 152
+ + L ++ ++ L N L + + Y
Sbjct: 86 YTSYGVARLLKEL---------APGRVVVLRSSAGNEV----LKTLVPNVIEVPVYDIVL 132
Query: 153 IAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNV 212
+ A A++F + ++V + + + +
Sbjct: 133 DRDRIEEAAKAIVMAKAVVFTSSTAVEAVAKAV--DLTGKTVVAIGAVTSQKLTQLGIPH 190
Query: 213 VTVACFPKET 222
+ A
Sbjct: 191 I-TAGEATIE 199
>gi|215448547|ref|ZP_03435299.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Mycobacterium tuberculosis T85]
Length = 247
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/215 (8%), Positives = 43/215 (20%), Gaps = 26/215 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM------QQSYGAIAIT 55
I +T ++A +++ G P I + L +
Sbjct: 13 RIAVT-SARRAEELCALLRRQGAEVCSAPAIKMIALPDDDELQNNTEALIADPPDILVAH 71
Query: 56 SSESLSTLPANFCRHTPIF----------AIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+ A I + +S + ++
Sbjct: 72 TGIGFRGWLAAAEGWGLANELLESLSSARIISRGPKATGALRAAGLREEWSPDSESSHEV 131
Query: 106 IVEQKVLFTPQKPLIYLGG-----KPRNFHFEDYLIEHKIPLRVIDCYYSQDIA----YP 156
+ + + F L + I Y + +
Sbjct: 132 LEYLLESGVSRTRIAVQLHGAADSWDPFPEFLGGLRFAGAQVVPIRVYRWKPAPLGGVFD 191
Query: 157 ETTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS 191
+ DA+ F + + IS
Sbjct: 192 HLVTGIARRQFDAVTFTSAPAAAAVLERSRELDIS 226
>gi|307717034|gb|ADN88570.1| uroporphyrinogen-III synthase [Listeria seeligeri]
Length = 165
Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 45/162 (27%), Gaps = 3/162 (1%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
VF + QQ+ I TS ++ P + +
Sbjct: 1 IETKPQNV-VFTSEQQNVEWIFFTSVNAVEYFFKQHKVTKPYKYAVIGEKTKEKLADYGY 59
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
+ + E + + ++ ED L E + ++ Y +
Sbjct: 60 LPSFIPTLYQTEPFLSEWLEKYPEKTSILLPKSNLSRTVMEDTLKEKGYVIFPVELYETI 119
Query: 152 DIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPAKIS 191
++ +K L I+F + S+ F+S+
Sbjct: 120 FPTKSKSLLKQLFTQNENQIIIFASPSAWKNFYSVAKNFPSQ 161
>gi|226307674|ref|YP_002767634.1| hypothetical protein RER_41870 [Rhodococcus erythropolis PR4]
gi|226186791|dbj|BAH34895.1| hypothetical protein RER_41870 [Rhodococcus erythropolis PR4]
Length = 281
Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/246 (7%), Positives = 51/246 (20%), Gaps = 36/246 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
I +T ++ +++ G V P+ + + + L + + I++
Sbjct: 11 IALT-AERRVEEFATLLERRGAEIVRTPVIHVLPLVDDRDLRTQTSALIADPPELVVIST 69
Query: 57 SESLSTL----------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
I +G + + +++
Sbjct: 70 GIGFRGWLDAVASWGLTDEFLGALARTRIIARGPKATGAIRGAGLREEWSPSGESSEEVL 129
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEH-----KIPLRVIDCYYSQDIAYPETTMK 161
+ + + + Y
Sbjct: 130 EHLGSEGVAGLRVAVQLHGTITEWEPLTDLSASLADIGAVVTPVSVYRWIRPPDQSPVRA 189
Query: 162 NLLQ----NADAILFYARSSVLYFFSLPLPAKISAAFL----------CLSNNIASAIPA 207
+ DA+ F + +V S F+ C+ A+ +
Sbjct: 190 LVAAVRSGAIDALTFTSAPAVSSMLSTAKEMGELERFVAAMRGPVPTYCVGPVTAAPLEL 249
Query: 208 SYKNVV 213
+
Sbjct: 250 LGVPTI 255
>gi|307717028|gb|ADN88567.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 7/159 (4%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC--RHTPIFAIGEASACLARQKGF 89
+ S+ + + +TS+ ++ N H I IGE + + G+
Sbjct: 1 IKTRPKKISLSREQLE-AEWLFLTSANAVEYFFMNQPGEAHYKIAVIGEKTREKLAEFGY 59
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
F + E + ++ +D L E + ++ Y
Sbjct: 60 KPSFVPSIYQS--EIFLEEWLNENPEKTSVLLPQSNLSRSIIKDTLTEKGYLVHSVELYE 117
Query: 150 SQDIAYPETTMKNLLQNA--DAILFYARSSVLYFFSLPL 186
+ + + LL + I+F + S+ F+S+
Sbjct: 118 TVFPENSKIKLAELLNSNDTHIIIFASPSAWKNFYSIAK 156
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + ++V YFF + P + + + V + L+
Sbjct: 19 WLFLTSANAVEYFF-MNQPGEAHYKIAVIGEKTREKLAEFGYKPSFVPSIYQSEIFLE 75
>gi|282880047|ref|ZP_06288769.1| uroporphyrinogen-III synthase [Prevotella timonensis CRIS 5C-B1]
gi|281306161|gb|EFA98199.1| uroporphyrinogen-III synthase [Prevotella timonensis CRIS 5C-B1]
Length = 264
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 74/248 (29%), Gaps = 30/248 (12%)
Query: 1 MY--IVITRPIKKALRTQEKIQKMG--YIPVMMPLSYFIHDRESVFLAMQ----QSYGAI 52
M I+IT P + R + ++ V +P+ + + Y +
Sbjct: 1 MKPTILITAPQHYSSRLEASFKRYQDQVSVVHIPMVQSTFATNNKQMQELCTHLHEYDFV 60
Query: 53 AITSSESLSTLPANFCRHT-----PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
S +++ + H AIG+ + L + G T F +++S +
Sbjct: 61 VCLSRKAIDAMHYYGHNHDDLTQTQFLAIGKDNDYLQDKLGVTPPFIAEESSPLGIAQAL 120
Query: 108 EQKVLFTPQKP------LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
E + + + L F L E I ++ ID Y + E
Sbjct: 121 EARGFTKGCRIAALSPAFVDLEEPQTVPVFIKRLKELNIDVQRIDAYVNMASELSERKKA 180
Query: 162 NLL---QNADAILFYARSSVLYFFSLPL-------PAKISAA-FLCLSNNIASAIPASYK 210
L Q ++F + S V+ F + + C+ A+
Sbjct: 181 YDLIIDQQISTVVFTSGSEVVAFKEGLEEVYGTDADSVLELIDVACMGPYTAAQARLIGL 240
Query: 211 NVVTVACF 218
V +
Sbjct: 241 KVDKIPTK 248
>gi|242049698|ref|XP_002462593.1| hypothetical protein SORBIDRAFT_02g028710 [Sorghum bicolor]
gi|241925970|gb|EER99114.1| hypothetical protein SORBIDRAFT_02g028710 [Sorghum bicolor]
Length = 299
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/256 (11%), Positives = 54/256 (21%), Gaps = 43/256 (16%)
Query: 17 EKIQKMGYIPVMMPLSYFIHDRESVFLA-----MQQSYGAIAITSSESLSTLPANFCRHT 71
+++ G PV +P + A+A TS +S +
Sbjct: 35 ALLRQRGAHPVPVPTIAVHPHDPDRLRPFLLPGALDPFAALAFTSRSGISAFARALSSSS 94
Query: 72 PI-----------------------FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
A A + + L + +
Sbjct: 95 HHPLADASALPFTVAALGSDADLLDHAFLSRLCGAAAGTRVSVLVPDVPTPAGLVEALGR 154
Query: 109 QKVL--FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD--IAYPETTMKNLL 164
P ++ L P F L Y + E +
Sbjct: 155 GSGRRVLCPVPDVVGLREPPVVPDFLAGLEAAGWVAVRAPAYTTCWAGPRCAEALVDPDA 214
Query: 165 QNADAILFYARSSVLYFFSLPLPAKISAA----------FLCLSNNIASAIPASYKNVVT 214
DA++F + + V A + A A + V
Sbjct: 215 APLDAVVFTSTAEVEGLLKRLESAGWTWARLTARCPGMVVAAHGPVTAGGARSLGVEVDV 274
Query: 215 VACF-PKETSLLKLLP 229
V+ ++ L
Sbjct: 275 VSARFSSFHGVVDALA 290
>gi|308071243|ref|YP_003872848.1| Uroporphyrinogen-III synthase [Paenibacillus polymyxa E681]
gi|305860522|gb|ADM72310.1| Uroporphyrinogen-III synthase [Paenibacillus polymyxa E681]
Length = 283
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 55/242 (22%), Gaps = 33/242 (13%)
Query: 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSESLSTLPA 65
A + KMG PV P + + + L T+ L L
Sbjct: 18 AEEMALLVVKMGGEPVQRPAQGTVFL-DDIELRNAVVAWVKHPPDWYIFTTGMGLDALFD 76
Query: 66 NFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ K +D +L +
Sbjct: 77 MAEDMGVAEQIMELLQSSNIAARGYKTVNGLKKRGFTPAVRDEDGSLIGLTGAFAPYDLK 136
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN---LLQNADAILF 172
K ++ +L E R + Y + + +N DA+ F
Sbjct: 137 GKEVLLQLHGDPAPRLVKWLDEQGAVTRQVLPYKHIPPEEAKLQALLEDVIHRNVDAVTF 196
Query: 173 YARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ + + L + + + A +I + V P E
Sbjct: 197 TSGPQIRFLAQYAREQNRIEDLLEAFREDVIAVSVGKVTAQSIVEEGIDRVVF---PTEE 253
Query: 223 SL 224
+
Sbjct: 254 RM 255
>gi|307717098|gb|ADN88602.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 7/159 (4%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANF--CRHTPIFAIGEASACLARQKGF 89
+ S+ + + +TS+ ++ N H I IGE + + G+
Sbjct: 1 IKTRPKKISLSREQLE-AEWLFLTSANAVEYFFMNQSGEAHYKIAVIGEKTREKLAEFGY 59
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
F + E + ++ +D L E + ++ Y
Sbjct: 60 KPSFVPSIYQS--EMFLEEWLNENPEKTSVLLPQSNLSRSIIKDTLTEKGYLVHSVELYE 117
Query: 150 SQDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPL 186
+ + + LL + I+F + S+ F+S+
Sbjct: 118 TVSPENSKIKLTELLNSNDIHIIIFASPSAWKNFYSIAK 156
Score = 35.9 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 6/58 (10%), Positives = 16/58 (27%), Gaps = 1/58 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + ++V YFF + + + + V + L+
Sbjct: 19 WLFLTSANAVEYFF-MNQSGEAHYKIAVIGEKTREKLAEFGYKPSFVPSIYQSEMFLE 75
>gi|313901124|ref|ZP_07834612.1| uroporphyrinogen-III C-methyltransferase [Clostridium sp. HGF2]
gi|312954082|gb|EFR35762.1| uroporphyrinogen-III C-methyltransferase [Clostridium sp. HGF2]
Length = 486
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/216 (8%), Positives = 50/216 (23%), Gaps = 15/216 (6%)
Query: 14 RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPI 73
Q ++Q +G + + + Q + +S ++ +
Sbjct: 262 ELQLELQDLGAAVDCITTGRICANPALLDDVNLQETDILVFSSRNAIEIFFTQLVQRRQD 321
Query: 74 FAIGEASACL-------ARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKP 126
+ + + + +E + + L+ +
Sbjct: 322 VRQLSTVKIAVVGEKSRQVLARYGIQADIQPQQEDSEHLALELQKHISKNDRLVLVKADN 381
Query: 127 RNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPL 186
N + L EH + + Y Q++ + D LF V +
Sbjct: 382 DNRVLFEQLQEH-AHVSLCKAYTVQELPFD-----LPQHVYDGALFTCSFHVHACLGRLM 435
Query: 187 --PAKISAAFLCLSNNIASAIPASYKNVVTVACFPK 220
+ + A+ + +
Sbjct: 436 ECQDVTELKVYSMGAHTTRALRSYGCQHIIELPKAD 471
>gi|111220487|ref|YP_711281.1| uroporphyrin-III C-methyltransferase [Frankia alni ACN14a]
gi|111148019|emb|CAJ59685.1| Uroporphyrin-III C-methyltransferase [Frankia alni ACN14a]
Length = 521
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 63/250 (25%), Gaps = 24/250 (9%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAI--AITSS 57
+++ TRP +++++G V +++ ++ + GA +
Sbjct: 262 RVLVARTRPRPGL--LARRLRQLGADAVETVVAHPAPPDDAGAALLAALPGAAGLVLADP 319
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ ++ + A R +A + T + + +
Sbjct: 320 DEVAAVVALLRRAGTDVRALAGLTLVAARPDVTDALDALGLAATTLDQLGQADRTDAGAG 379
Query: 118 PLIYLGGKPRNFHFEDYLIE---------------HKIPLRVI-DCYYSQDIAYPETTMK 161
+ P + A P+ +
Sbjct: 380 DAGRVARAAGAGPAAAGRRPAPGPAVLVVGAADLPAGGPWTPRRVPLLTDVTADPDPRIA 439
Query: 162 NLLQN--ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+ L++ D F + ++ L P + A A A+ V V P
Sbjct: 440 DELRHGDFDVAAFASSTAARSTAQLYGPLPPDLLVAAMGRRSAEACEAAGIRVDIVPTEP 499
Query: 220 KETSLLKLLP 229
L +
Sbjct: 500 GVRPLAAAVA 509
>gi|16611930|gb|AAL27413.1|AF429957_4 uroporphyrinogen synthase [uncultured bacterium]
Length = 143
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M I +T+ + QE ++ MG +PL L Q TS ++
Sbjct: 1 MRIALTQSEGRLAGLQEALEAMGLEVWRVPLVQTRFLPAD--LTPIQDCRWWLFTSVAAV 58
Query: 61 STLPA 65
+ A
Sbjct: 59 RAVQA 63
Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 34/115 (29%), Gaps = 6/115 (5%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + R ++ L + + + ++ + +Q+ LF + ++
Sbjct: 2 RIALTQSEGRLAGLQEALEAMGLEVWRVPLVQTRFLPAD----LTPIQDCRWWLFTSVAA 57
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL-LPLR 231
V + + A+ + V VA SL K L R
Sbjct: 58 VRA-VQALGASLEGRRLGAVGPATQRALEEAGGVVELVAPEGNALSLAKAFLARR 111
>gi|307717054|gb|ADN88580.1| uroporphyrinogen-III synthase [Listeria innocua]
Length = 165
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 7/163 (4%)
Query: 34 FIHDRESVFL-AMQQSYGAIAITSSESLSTLPANFCR--HTPIFAIGEASACLARQKGFT 90
+++ L Q+ + +TS+ ++ + I IGE + + G+
Sbjct: 1 IETHPKNISLSLKQKEANWLFLTSANAVEYFFNEQAGKLNYKIAVIGEKTKEKLAEYGYK 60
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
F + + E T Q ++ ED L ++ + I+ Y +
Sbjct: 61 PNFVPSVYQSEV--FLSEWLSENTSQTSILLPQSNLSRTIIEDTLTQNGHLVFPIELYET 118
Query: 151 QDIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPAKIS 191
+T + L I+F + S+ F+++ I
Sbjct: 119 SFPENSQTILIEQLKLDEKRIIIFASPSAWKNFYTIAKQFSIK 161
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 6/49 (12%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 168 DAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVA 216
+ + + ++V YFF+ K++ + + V
Sbjct: 18 NWLFLTSANAVEYFFNE-QAGKLNYKIAVIGEKTKEKLAEYGYKPNFVP 65
>gi|307717082|gb|ADN88594.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
gi|307717104|gb|ADN88605.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 7/159 (4%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC--RHTPIFAIGEASACLARQKGF 89
+ S+ + + +TS+ ++ N H I IGE + + G+
Sbjct: 1 IKTRPKKISLSREQLE-AEWLFLTSANAVEYFFMNQPGEAHYKIAVIGEKTREKLAEFGY 59
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
F + E + ++ +D L E + ++ Y
Sbjct: 60 KPSFIPSIYQS--EMFLEEWLNENPEKTSVLLPQSNLSRSIIKDTLTEKGYLVHSVELYE 117
Query: 150 SQDIAYPETTMKNLLQ--NADAILFYARSSVLYFFSLPL 186
+ + + LL + I+F + S+ F+S+
Sbjct: 118 TVSPENSKIKLTELLNSNDIHIIIFASPSAWKNFYSIAK 156
Score = 36.3 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 6/58 (10%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + ++V YFF + P + + + + + L+
Sbjct: 19 WLFLTSANAVEYFF-MNQPGEAHYKIAVIGEKTREKLAEFGYKPSFIPSIYQSEMFLE 75
>gi|212639304|ref|YP_002315824.1| uroporphyrinogen-III synthase [Anoxybacillus flavithermus WK1]
gi|212560784|gb|ACJ33839.1| Uroporphyrinogen-III synthase [Anoxybacillus flavithermus WK1]
Length = 296
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/239 (10%), Positives = 57/239 (23%), Gaps = 30/239 (12%)
Query: 13 LRTQEKIQKMGYIPVMMP----LSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC 68
I K G IP+ P + + + + + T+ TL
Sbjct: 47 EEMSMLIAKQGGIPLSRPAQGTMFCNEELEQQLHQMINEPVDWFIFTTGIGAETLIKKAD 106
Query: 69 RHTPIFAIGEASACLARQKGFTQI----------FHGKDNSINLAKIIVEQKVLFTPQKP 118
A+ + + H N +I + K
Sbjct: 107 EWGMKDALLQVIRRAHIAVRGYKTVNVLRAYGISPHITANDGTTRGLIRALGDVEWKNKH 166
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPL-RVIDCYYSQDIAYPETTMKNLLQNA--DAILFYAR 175
++ + +L++ V ++ + + + + A+ F +
Sbjct: 167 VVVQLYGDSVPSLQQFLVKQGALYKEVWPYLHTPPTPSVMKQLIDEIISRSVQAVCFTSA 226
Query: 176 SSVLYFFSLPLPAK----------ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
V +FFS+ + + A+ V P +
Sbjct: 227 IQVRFFFSVVNEWGYIREMKRALADDVVAVAVGKVTKEALHEEGVARVI---APDHERM 282
>gi|51473661|ref|YP_067418.1| hypothetical protein RT0461 [Rickettsia typhi str. Wilmington]
gi|51459973|gb|AAU03936.1| rickettsial conserved hypothetical protein [Rickettsia typhi str.
Wilmington]
Length = 271
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 69/267 (25%), Gaps = 42/267 (15%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYI--PVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ T ++I K + L + ++ + +Y I ITS
Sbjct: 1 MKSVLLTRNIQENKETIQEISKYNLDLRYIHCALIKYQTLDFNI--NILNNYSNIIITSK 58
Query: 58 ESLSTLPANFCRHTPIFAIGE---------ASACLARQKGFTQIFHGKDNSINLA--KII 106
+ S L + + I
Sbjct: 59 YAASILADYNLQQDIWVVGSKTKQLLGKKVMYTAKNIADLIQHFPTDLYKHTIYLSSNEI 118
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP---------- 156
+ + + + E I Y ++
Sbjct: 119 TKDLPHKIARHIIYNVEYLNELPISIIQEFEKNIRFFSKVAYRNEFKENITRDTTSYKKV 178
Query: 157 ----------ETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNI 201
+ + D IL Y+++S L L + + + +S +
Sbjct: 179 DDDHSLGPTYPLEEQLGKMSIDFILLYSQNSAKTLVRLLLQNNLLQYLQDSLVIAISLKV 238
Query: 202 ASAIPASYKNVVTVACFPKETSLLKLL 228
A+ + + V ++KLL
Sbjct: 239 ANIVR-PFIKNVVYCDNQNSNDIIKLL 264
>gi|319948966|ref|ZP_08023070.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Dietzia cinnamea P4]
gi|319437371|gb|EFV92387.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Dietzia cinnamea P4]
Length = 542
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/243 (9%), Positives = 63/243 (25%), Gaps = 40/243 (16%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAITS 56
+ +T ++A + +++ G + P + I E + + +T+
Sbjct: 20 VAVT-AARRASEQRTLLERRGATVLHAPAMHMIPIAEDTVVREATERLLATPADLMVLTT 78
Query: 57 SESLSTLPANFCRH------------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
+ + P+++ G + R G + + +
Sbjct: 79 AAGVRWWMQVCEEWGLAGQLLELMGRIPLYSRGPKTTGAIRAAGLREHASAVSEASP--E 136
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFED-----YLIEHKIPLRVIDCYYSQDIAYPETT 159
++ + + L + + + Y +
Sbjct: 137 LLEMLVERGVDGLTIGVQVQGAGSGWNPMAPLLDGLRDAGADVIEVPVYRWELPEDLAAL 196
Query: 160 MKNL----LQNADAILFYARSSVL----------YFFSLPLPAKISAAFLCLSNNIASAI 205
+ + D + F A +V+ F L + A LC+ A+ +
Sbjct: 197 DELVTTIARHGVDGVTFTAAPAVVAVLARADAIGLFDDLLDALRGPVAALCVGPVTAAPL 256
Query: 206 PAS 208
Sbjct: 257 ADL 259
>gi|319943886|ref|ZP_08018167.1| hypothetical protein HMPREF0551_1013 [Lautropia mirabilis ATCC
51599]
gi|319743119|gb|EFV95525.1| hypothetical protein HMPREF0551_1013 [Lautropia mirabilis ATCC
51599]
Length = 299
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 52/203 (25%), Gaps = 10/203 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS-YGAIAITSSESL 60
+++T+ A + ++ G + P ++ LA S + + S ++
Sbjct: 19 NLILTQDDASAAEWRALLEPAGLVSCHWPAFQIEALSDADILAAFDSGAEGVVLPSPAAV 78
Query: 61 STLPANFCRHTPIFAIG---------EASACLARQKGFTQIFHGKDNSINLAKIIVEQKV 111
+ R + A A ++ + A +
Sbjct: 79 RVVAQALQRGGRRWPSAVWAGLPGAGSAHAFTRHFGTGPRLLVPPPPYQDAAHLARLVLC 138
Query: 112 LFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAIL 171
L + ++ L + L + + + Y ++ Q A
Sbjct: 139 LQPLPQRIVVLNRPDGRREWAGVLQDAGVQVDWQPAYQARWCTAAPAGFMEAWQGWQAAA 198
Query: 172 FYARSSVLYFFSLPLPAKISAAF 194
A S P A A
Sbjct: 199 PDAEVSEPLAMQDPDEADEDTAL 221
>gi|307717072|gb|ADN88589.1| uroporphyrinogen-III synthase [Listeria marthii]
Length = 165
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 7/160 (4%)
Query: 34 FIHDRESVFLAM-QQSYGAIAITSSESLSTLP--ANFCRHTPIFAIGEASACLARQKGFT 90
+ L QQ+ + +TS ++ + IGE + + G+T
Sbjct: 1 IETHPKKFNLNQEQQAADWLFLTSVNAVEYFFANQCVETNYKFAVIGEKTQEKLAEFGYT 60
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
F + + E + Q ++ +D LIE + I+ Y +
Sbjct: 61 PSFVPSAYQSEV--FLSEWLNEYPNQTSILLPQSNLSRSIIKDTLIEKGHLVFSIELYET 118
Query: 151 QDIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPA 188
+ +T + N L I+F + S+ F+S+
Sbjct: 119 SFPEHSKTMLANQLKLNEKQIIIFASPSAWKNFYSIAKTF 158
>gi|307717042|gb|ADN88574.1| uroporphyrinogen-III synthase [Listeria marthii]
gi|307717070|gb|ADN88588.1| uroporphyrinogen-III synthase [Listeria marthii]
Length = 165
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 7/160 (4%)
Query: 34 FIHDRESVFLAM-QQSYGAIAITSSESLSTLP--ANFCRHTPIFAIGEASACLARQKGFT 90
+ L QQ+ + +TS ++ + IGE + + G+T
Sbjct: 1 IETHPKKFNLNQEQQAADWLFLTSVNAVEYFFANQCVETNYKFAVIGEKTQEKLAEFGYT 60
Query: 91 QIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS 150
F + + E + Q ++ +D LIE + I+ Y +
Sbjct: 61 PSFVPSAYQSEV--FLSEWLNEYPNQTSILLPQSNLSRSIIKDTLIEKGHLVFSIELYET 118
Query: 151 QDIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPA 188
+ +T + N L I+F + S+ F+S+
Sbjct: 119 SFPEHSKTMLANQLKLNEKQIIIFASPSAWKNFYSIAKTF 158
>gi|47779351|gb|AAT38580.1| putative protein [uncultured gamma proteobacterium eBACHOT4E07]
Length = 217
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 53/187 (28%), Gaps = 7/187 (3%)
Query: 29 MPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKG 88
+PL + + + I S+ S + S K
Sbjct: 23 IPLFRTKGIQYQID---IHKFENIIFQSTSSAAFFIEYESLKNKNVFSMGKSTKDYLSKQ 79
Query: 89 FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCY 148
+ + + + + G+ +YL + I+CY
Sbjct: 80 GVKSVCPSIPGST---ELKKLLSKNKKGGNYLIVKGENGLNEILNYLNSSNEYVEEINCY 136
Query: 149 YSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
+ ++N +ADAI+F + + FF K+ A +S I I +
Sbjct: 137 KRFKLE-SYENVRNEFYDADAIIFPSTYAFKIFFEEIYSTKVKAKLFGISKRIIDYISSY 195
Query: 209 YKNVVTV 215
+ +
Sbjct: 196 DLDSDFI 202
>gi|299138038|ref|ZP_07031218.1| ANTAR domain protein with unknown sensor [Acidobacterium sp.
MP5ACTX8]
gi|298599968|gb|EFI56126.1| ANTAR domain protein with unknown sensor [Acidobacterium sp.
MP5ACTX8]
Length = 547
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/263 (9%), Positives = 59/263 (22%), Gaps = 41/263 (15%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAITSSESLSTLP 64
+A ++ I G P+++P + + ++ + + + + +
Sbjct: 18 RAKEVEKLILTYGGEPIVVPAMREVGLESNQHVLDFAAHLLEGRFDLLIFMTGVGVRAML 77
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDN--------------SINLAKIIVEQK 110
A + + L + I
Sbjct: 78 EIVQTRYDREDFLAALRKIKIAVRGAKPNSALRELKINADVVSEEPSTWHELLQAIDAAY 137
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----N 166
+ N L L + Y + + +L +
Sbjct: 138 GDALGDMRVAVQEYGASNPELLAELSSRTRELTKVPVYQWALPEDLQPLRECVLGILSGS 197
Query: 167 ADAILFYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
D +LF ++ F + A A + + + +
Sbjct: 198 VDVVLFMTAVQAIHLFRVAEQMGVRNELREALGKAVVVSIGPTTSEELTHYGLEPDFEPS 257
Query: 218 FPKETSLLK--------LLPLRR 232
PK ++ LL +R
Sbjct: 258 RPKMGFMVNEAAQYSSGLLVKKR 280
>gi|297172434|gb|ADI23408.1| uroporphyrinogen-III synthase [uncultured gamma proteobacterium
HF0770_28K04]
Length = 173
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/167 (11%), Positives = 45/167 (26%), Gaps = 19/167 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ-----SYGAIAITSS 57
I ITR + + I + + +P + E + SS
Sbjct: 7 IAITRSKDDSQEFIDLITREKGNVLPLPTIELVGRGEKIVDEFLSALTEGDPDYSVFMSS 66
Query: 58 ESLSTLPANFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKI 105
+++S L + + A+G + ++ + + S
Sbjct: 67 KAVSLLFETAKKAGKFEELRLAVANTIVLAVGPRTKDALEKENVKVAYMPQRYSSVGIGE 126
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD 152
+ L K +I ++ L + + + + Y
Sbjct: 127 V--FTKLNAVGKKVIIPRSGASTPFLKELLEKIGLDVTELYLYDVCA 171
>gi|184200500|ref|YP_001854707.1| hypothetical protein KRH_08540 [Kocuria rhizophila DC2201]
gi|183580730|dbj|BAG29201.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 381
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
A++ A S + PA A++ + A A+ V A P +L
Sbjct: 308 AVVVTAPSRAGQLLDVNRPA-EGTAWIAIGEPTARALREQGLTPV-TAAHPTPEALADA 364
>gi|311896286|dbj|BAJ28694.1| putative transcriptional regulator [Kitasatospora setae KM-6054]
Length = 386
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 18/239 (7%), Positives = 51/239 (21%), Gaps = 31/239 (12%)
Query: 20 QKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITSSESLSTLPANFCRHT-- 71
Q+ G + P + + L + T+
Sbjct: 46 QRRGAGVLRAPALRIVPLADDTDLHGATRALIADPPDLAVATTGIGFRGWLEAADGWDLG 105
Query: 72 --------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLG 123
+ + + + A+++ +
Sbjct: 106 DGLRAALGRASVLARGPKAKGAIRAAGLRESYSAATESSAEVLSHLLEEGVDGLRIAVQL 165
Query: 124 GKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN----LLQNADAILFYARSSVL 179
F + L + + Y A + DA+ F + + +
Sbjct: 166 HGAPLPGFVESLRTAGADVVEVPVYRWLPPADLGPLDRLLDATCAGALDAVTFTSAPAAI 225
Query: 180 YFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
L + +C+ ++ + A V + ++++ L
Sbjct: 226 SLLDRAARRGRTGELLHALRRDVLAVCVGPVTSAPLDALDVPTVW-PERMRLGAMVQTL 283
>gi|325191348|emb|CCA26129.1| uroporphyrinogenIII synthase putative [Albugo laibachii Nc14]
Length = 283
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 63/241 (26%), Gaps = 35/241 (14%)
Query: 15 TQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ----QSYGAIAITSSESLSTLPANFCR- 69
Q K+ F + + I ITS + +
Sbjct: 34 LQRKLIARFAQV-----LTFEYVNRPQLCDTLIHLEARHAGIIITSPRASMAIAEAIKDI 88
Query: 70 ----HTPIFAIGEASA-----CLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT------ 114
+ + +A A + +
Sbjct: 89 PEPSYCDVIRQLRGTALFSVGAATSSNLHQLGISCNGEGSGSADALADHLFHDGILPLSH 148
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
KPL++L G R + +PL + Y S I + + I F++
Sbjct: 149 TTKPLLFLCGDKRRDSIPSAFQQRNLPLIELKVYESCPIEDF--RFPDGVGVPAWIAFFS 206
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAI-------PASYKNVVTVACFPKETSLLKL 227
S + ++PLP + + N ASA+ + +A P +L +
Sbjct: 207 PSGLKAVQNVPLPWPL-IRKAAIGNTTASALQKYADTTRQMHWKAQAIAVAPNSDALARA 265
Query: 228 L 228
+
Sbjct: 266 I 266
>gi|296112248|ref|YP_003626186.1| putative uroporphyrinogen-III synthase [Moraxella catarrhalis RH4]
gi|295919942|gb|ADG60293.1| putative uroporphyrinogen-III synthase [Moraxella catarrhalis RH4]
gi|326563078|gb|EGE13351.1| uroporphyrinogen-III synthase [Moraxella catarrhalis 12P80B1]
Length = 252
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 62/242 (25%), Gaps = 27/242 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITS 56
++ TRP + ++ G + +PL + A + Y + +TS
Sbjct: 6 LINTRPKHRGQAIRQM---TGMPVIDLPLLDIQTLPMTETKASMMRAWLDHDYDVLVVTS 62
Query: 57 SESLSTLPANFCRHTPIFAIGEA----------SACLARQKGFTQIFHGKDNSINLAKII 106
ES + A + N +
Sbjct: 63 VESARRALEYLDKLHGGHHWQSKLPNAPIVAVGLATAKVLTDRGLPVVLPRVTNNEGMLA 122
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-- 164
+ + ++ G + L + + VI Y + L
Sbjct: 123 MTEIRSLISGSRVLIWRGAGGRKLLHETLKARGVQIDVIRWYERFIPMDLMDNFQKNLKI 182
Query: 165 --QNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVT---VACFP 219
+ AD + + + P +L L + + I A +V+ V P
Sbjct: 183 INEKADVFVIISSEMAYQAWRRL-PHHRQYHYLALGERLKNIIHAYEPDVMVDELVTLEP 241
Query: 220 KE 221
E
Sbjct: 242 TE 243
>gi|312111153|ref|YP_003989469.1| uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y4.1MC1]
gi|311216254|gb|ADP74858.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. Y4.1MC1]
Length = 268
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 26/234 (11%), Positives = 55/234 (23%), Gaps = 29/234 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITSSESLSTLPANF 67
I+K G I ++ P + + + + + T+ + L
Sbjct: 15 EEMTTLIEKQGGIALVRPAQGTVFSREGELEDEIRGVIAMRPDWLIFTTGIGVEALLQAA 74
Query: 68 CRHTPIFAIGEASACLARQKGFTQI----------FHGKDNSINLAKIIVEQKVLFTPQK 117
R + + + +I K +K
Sbjct: 75 ERGGIKEEWVKTIQQANVAARGYKTVAALKKIGISPIAVSDDGTTKGLIRSLKEHSFAEK 134
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA---YPETTMKNLLQNADAILFYA 174
++ + +L E+ + Y + + + + DA+ F A
Sbjct: 135 KVVVQLYGDTAPTLKQFLAENGAAYIELLPYRHVAPDREVLEKLYEEVIQREVDAVCFTA 194
Query: 175 RSSVLYFFSLPLPA----------KISAAFLCLSNNIASAIPASYKNVVTVACF 218
V + FS + A A+ V VA
Sbjct: 195 AIQVRFLFSFVKEHKDIELFRRAFNEEVIACAVGKVTAEALQEEGITRV-VAPE 247
>gi|295400321|ref|ZP_06810300.1| Uroporphyrinogen III synthase HEM4 [Geobacillus thermoglucosidasius
C56-YS93]
gi|294977596|gb|EFG53195.1| Uroporphyrinogen III synthase HEM4 [Geobacillus thermoglucosidasius
C56-YS93]
Length = 268
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 26/234 (11%), Positives = 55/234 (23%), Gaps = 29/234 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITSSESLSTLPANF 67
I+K G I ++ P + + + + + T+ + L
Sbjct: 15 EEMTTLIEKQGGIALVRPAQGTVFSREGELEDEIRGVIAMRPDWLIFTTGIGVEALLQAA 74
Query: 68 CRHTPIFAIGEASACLARQKGFTQI----------FHGKDNSINLAKIIVEQKVLFTPQK 117
R + + + +I K +K
Sbjct: 75 ERGGIKEEWVKTIQQANVAARGYKTVAALKKIGISPIAVSDDGTTKGLIRSLKEHSFAEK 134
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIA---YPETTMKNLLQNADAILFYA 174
++ + +L E+ + Y + + + + DA+ F A
Sbjct: 135 KVVVQLYGDTAPTLKQFLAENGAAYIELLPYRHVAPDREVLEKLYEEVIQREVDAVCFTA 194
Query: 175 RSSVLYFFSLPLPA----------KISAAFLCLSNNIASAIPASYKNVVTVACF 218
V + FS + A A+ V VA
Sbjct: 195 AIQVRFLFSFVKEHKDIELFRQAFNEEVIACAVGKVTAEALQEEGITRV-VAPE 247
>gi|326575505|gb|EGE25430.1| uroporphyrinogen-III synthase [Moraxella catarrhalis 101P30B1]
Length = 252
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 62/242 (25%), Gaps = 27/242 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITS 56
++ TRP + ++ G + +PL + A + Y + +TS
Sbjct: 6 LINTRPKHRGQAIRQM---TGMPVIDLPLLDIQTLPMTETKASMMRAWLDHDYDVLVVTS 62
Query: 57 SESLSTLPANFCRHTPIFAIGEA----------SACLARQKGFTQIFHGKDNSINLAKII 106
ES + A + N +
Sbjct: 63 VESARRALEYLDKLHGGHHWQSKLPNAPIVAVGLATAKVLTDRGLSVVLPRVTNNEGMLA 122
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-- 164
+ + ++ G + L + + VI Y + L
Sbjct: 123 MTEIRSLISGSRVLIWRGAGGRKLLHETLKARGVQIDVIRWYERFIPMDLMDNFQKNLTI 182
Query: 165 --QNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVT---VACFP 219
+ AD + + + P +L L + + I A +V+ V P
Sbjct: 183 INEKADVFVIISSEMAYQAWRRL-PHHRQYHYLALGERLKNIIHAYEPDVMVDELVTLEP 241
Query: 220 KE 221
E
Sbjct: 242 TE 243
>gi|326560716|gb|EGE11084.1| uroporphyrinogen-III synthase [Moraxella catarrhalis 46P47B1]
gi|326574376|gb|EGE24319.1| uroporphyrinogen-III synthase [Moraxella catarrhalis CO72]
Length = 252
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 62/242 (25%), Gaps = 27/242 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITS 56
++ TRP + ++ G + +PL + A + Y + +TS
Sbjct: 6 LINTRPKHRGQAIRQM---TGMPVIDLPLLDIQTLPMTETKASMMRAWLDHDYDVLVVTS 62
Query: 57 SESLSTLPANFCRHTPIFAIGEA----------SACLARQKGFTQIFHGKDNSINLAKII 106
ES + A + N +
Sbjct: 63 VESARRALEYLDKLHGGHHWQSKLPNAPIVAVGLATAKVLTDRGLSVVLPRVTNNEGMLA 122
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-- 164
+ + ++ G + L + + VI Y + L
Sbjct: 123 MTEIRSLISGSRVLIWRGAGGRKLLHETLKARGVQIDVIRWYERFIPMDLMDNFQKNLKI 182
Query: 165 --QNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVT---VACFP 219
+ AD + + + P +L L + + I A +V+ V P
Sbjct: 183 INEKADVFVIISSEMAYQAWRRL-PHHRQYHYLALGERLKNIIHAYEPDVMVDELVTLEP 241
Query: 220 KE 221
E
Sbjct: 242 TE 243
>gi|229493924|ref|ZP_04387696.1| uroporphyrinogen-III synthase [Rhodococcus erythropolis SK121]
gi|229319201|gb|EEN85050.1| uroporphyrinogen-III synthase [Rhodococcus erythropolis SK121]
Length = 281
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/246 (7%), Positives = 51/246 (20%), Gaps = 36/246 (14%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
I +T ++ +++ G V P+ + + + L + + I++
Sbjct: 11 IALT-AERRVEEFATLLERRGAEIVRTPVIHVLPLVDDRDLRTQTSALIADPPELVVIST 69
Query: 57 SESLSTL----------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
I +G + + +++
Sbjct: 70 GIGFRGWLDAVASWGLTEEFLGALAHTRIIARGPKATGAIRGAGLREEWSPSGESSEEVL 129
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEH-----KIPLRVIDCYYSQDIAYPETTMK 161
+ + + + Y
Sbjct: 130 AHLGSEGVAGLRIAVQLHGTITEWEPLTDLSASLADIGAVVTPVSVYRWIRPPDQSPVRA 189
Query: 162 NLLQ----NADAILFYARSSVLYFFSLPLPAKISAAFL----------CLSNNIASAIPA 207
+ DA+ F + +V S F+ C+ A+ +
Sbjct: 190 LVAAVRSGAIDALTFTSAPAVSSMLSTAKEMGELERFVAAMRGPVPTYCVGPVTAAPLEL 249
Query: 208 SYKNVV 213
+
Sbjct: 250 LGVPTI 255
>gi|167754989|ref|ZP_02427116.1| hypothetical protein CLORAM_00493 [Clostridium ramosum DSM 1402]
gi|237735284|ref|ZP_04565765.1| porphyrin biosynthesis protein [Mollicutes bacterium D7]
gi|167705039|gb|EDS19618.1| hypothetical protein CLORAM_00493 [Clostridium ramosum DSM 1402]
gi|229381029|gb|EEO31120.1| porphyrin biosynthesis protein [Coprobacillus sp. D7]
Length = 478
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/221 (9%), Positives = 56/221 (25%), Gaps = 11/221 (4%)
Query: 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR 69
+ L + ++ G + L + L + ++ I TS +
Sbjct: 262 DQELPISKYFKEQGAAVKQVQLGKVNYLNSQQKLDL--NHKLIVFTSQNGIRGFFNYLKM 319
Query: 70 HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNF 129
+ + + + + +I + L +
Sbjct: 320 QR---VDHRSLTTVRFACIGEKTANLLQLYGYYSDLISPKANSEDFNNYLKNKR--MDSE 374
Query: 130 HFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAK 189
+ ++ + + + + ++ F SSV P K
Sbjct: 375 EMIIVRAKEHSKIKKRAEDHELIVYENKELIIVEEESYHLACFTCASSVERLAKYPSTFK 434
Query: 190 ISAAFLCLSNNIASAIPASYKNV-VTVACFPKETSLLKLLP 229
I L + A+ Y +V + A ++ ++
Sbjct: 435 I---ALSIGPMTTQALKKYYPHVKIIEAKDNSYEGMIAIIK 472
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 40/137 (29%), Gaps = 10/137 (7%)
Query: 102 LAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK 161
L + + K ++ + Y E ++ + Y + K
Sbjct: 238 LHHELDFFQRKILLNKKILVACVSDQELPISKYFKEQGAAVKQ---VQLGKVNYLNSQQK 294
Query: 162 NLLQNADAILFYARSSVLYFFSLPL------PAKISAAFLCLSNNIASAIPASYKNVVTV 215
L N I+F +++ + FF+ + + F C+ A+ + +
Sbjct: 295 LDL-NHKLIVFTSQNGIRGFFNYLKMQRVDHRSLTTVRFACIGEKTANLLQLYGYYSDLI 353
Query: 216 ACFPKETSLLKLLPLRR 232
+ L +R
Sbjct: 354 SPKANSEDFNNYLKNKR 370
>gi|326561757|gb|EGE12092.1| uroporphyrinogen-III synthase [Moraxella catarrhalis 7169]
gi|326569019|gb|EGE19088.1| uroporphyrinogen-III synthase [Moraxella catarrhalis BC1]
gi|326571710|gb|EGE21723.1| uroporphyrinogen-III synthase [Moraxella catarrhalis BC8]
gi|326578076|gb|EGE27936.1| uroporphyrinogen-III synthase [Moraxella catarrhalis O35E]
Length = 252
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 62/242 (25%), Gaps = 27/242 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITS 56
++ TRP + ++ G + +PL + A + Y + +TS
Sbjct: 6 LINTRPKHRGQAIRQM---TGMPVIDLPLLDIQTLPMTETKASMMRAWLDYDYDVLVVTS 62
Query: 57 SESLSTLPANFCRHTPIFAIGEA----------SACLARQKGFTQIFHGKDNSINLAKII 106
ES + A + N +
Sbjct: 63 VESARRALEYLDKLHGGHHWQSKLPNAPIVAVGLATAKVLTDRGLPVVLPRVTNNEGMLA 122
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-- 164
+ + ++ G + L + + VI Y + L
Sbjct: 123 MTEIRSLISGSRVLIWRGAGGRKLLHETLKARGVQIDVIRWYERFIPMDLMDNFQKNLKI 182
Query: 165 --QNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVT---VACFP 219
+ AD + + + P +L L + + I A +V+ V P
Sbjct: 183 INEKADVFVIISSEMAYQAWRRL-PHHRQYHYLALGERLKNIIHAYEPDVMVDELVTLEP 241
Query: 220 KE 221
E
Sbjct: 242 TE 243
>gi|224457333|ref|ZP_03665806.1| uroporphyrinogen-III synthase [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 46
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH 36
M I++ RP A+ EK+ G + V +P +
Sbjct: 1 MKILVCRPQNDAVNLTEKLCANGLLAVSLPTIKICY 36
>gi|326562301|gb|EGE12627.1| uroporphyrinogen-III synthase [Moraxella catarrhalis 103P14B1]
Length = 252
Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/226 (11%), Positives = 56/226 (24%), Gaps = 24/226 (10%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITS 56
++ TRP + ++ G + +PL + A + Y + +TS
Sbjct: 6 LINTRPKHRGQAIRQM---TGMPVIDLPLLDIQTLPMTETKASMMRAWLDHDYDVLVVTS 62
Query: 57 SESLSTLPANFCRHTPIFAIGEA----------SACLARQKGFTQIFHGKDNSINLAKII 106
ES + A + N +
Sbjct: 63 VESARQALEYLDKLHGGHHWQSKLPNAPIVAVGLATAKVLTDRGLSVVLPRVTNNEGMLA 122
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-- 164
+ + ++ G + L + + VI Y + L
Sbjct: 123 MTEIRSLISGSRVLIWRGAGGRKLLHETLKARGVQIDVIRWYERFIPMDLMDNFQKNLKI 182
Query: 165 --QNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
+ AD + + + P +L L + + I A
Sbjct: 183 INEKADVFVIISSEMAYQAWRRL-PHHRQYHYLALGERLKNIIHAY 227
>gi|315637148|ref|ZP_07892370.1| uroporphyrinogen III cosynthase HemD [Arcobacter butzleri JV22]
gi|315478515|gb|EFU69226.1| uroporphyrinogen III cosynthase HemD [Arcobacter butzleri JV22]
Length = 137
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 8/113 (7%)
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYA 174
K ++Y+ + + L E+ I L I Y + +L+ +F +
Sbjct: 28 KDKKVLYVKALKTVSNLPNILKENGIFLDEIIAYKTSCKKSNI-----ILEENSIFIFTS 82
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
SSV FF K S + + A +P++ ++ +KL
Sbjct: 83 PSSVECFFKQY-SWKNSYKAIVIGKTTAEFLPSN--INYEISSQTSVEECIKL 132
>gi|88797647|ref|ZP_01113236.1| uroporphyrinogen-III synthetase [Reinekea sp. MED297]
gi|88779819|gb|EAR11005.1| uroporphyrinogen-III synthetase [Reinekea sp. MED297]
Length = 246
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 58/240 (24%), Gaps = 12/240 (5%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSS 57
I+I + ++ R Q+ + P+ + ++ + + S
Sbjct: 3 RILIPKASREQARWQQALAGESIEPLWIDPWQMSGLPQTAEHRNQWLNLDLFSGVVCVSP 62
Query: 58 ESLSTLPANFCRHTPIFAIGEAS-----ACLARQKGFTQIFHGKDNSINLAKIIVEQKVL 112
+ L A P+ G +++ +
Sbjct: 63 TAAEVLVAALDEFWPMPPSGVHWLCNGPRTAEVLSEAGLTPVFPQQGHTAEQVLALPEAQ 122
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILF 172
+ + G+ L E + Y M ++ +ADA+
Sbjct: 123 CAQGDKWLIVKGEGGRVTLAQTLTERGAIATELPVYRRAVDNDALQYMTSIRADADALWL 182
Query: 173 YARSSVLYFFSLPLPAKISAA--FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ + S + S + A V VA +L + +
Sbjct: 183 SSEFLGESLLNQGRDLWQSWTGEWWVSSPRLKDWCQAQGCRRVRVASGATVQAL-QAMIR 241
>gi|255029150|ref|ZP_05301101.1| hypothetical protein LmonL_08551 [Listeria monocytogenes LO28]
Length = 376
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 21/68 (30%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMLAEQIRDLGGEVTMYPNIQVLDVAPTKTKEQLSEVSELLFTSKEAVE 311
Query: 62 TLPANFCR 69
+
Sbjct: 312 RFFDYLAK 319
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 31/121 (25%), Gaps = 8/121 (6%)
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + + + + + + Q + T K L +LF ++
Sbjct: 250 HTKVLLPRARAGKSMLAEQIRDLGGEVTMYP--NIQVLDVAPTKTKEQLSEVSELLFTSK 307
Query: 176 SSVLYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+V FF + + A + +L+ LP
Sbjct: 308 EAVERFFDYLAKLDLDIRSLKNSHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLP 367
Query: 230 L 230
Sbjct: 368 R 368
>gi|134097670|ref|YP_001103331.1| uroporphyrinogen-III synthetase [Saccharopolyspora erythraea NRRL
2338]
gi|133910293|emb|CAM00406.1| uroporphyrinogen-III synthetase [Saccharopolyspora erythraea NRRL
2338]
Length = 281
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/255 (9%), Positives = 59/255 (23%), Gaps = 32/255 (12%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSE 58
+T +KA + + G + + + E LA +
Sbjct: 21 VT-AERKAEEIGGLLSRRGARVLYGAAMHTVPLPEDGELASATSEVLSAPVDIAIAITGV 79
Query: 59 SLSTL---------PANFCRHTPIFAIGEASACLARQKGFTQI-FHGKDNSINLAKIIVE 108
H + A + + A+++
Sbjct: 80 GFRGWLEAAEANGVRDRLVEHLRSATLLARGAKAKGAIRGAGLLEEWTSPAEESAEVLDH 139
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI---AYPETTMKNLLQ 165
++ F+ L + + + Y D + + +L
Sbjct: 140 LLARGVSGARIVLQVHGDPMLRFQSELRDAGAEVVPVTVYRWTDPLDLPALDDLIDAVLA 199
Query: 166 NADAIL-FYARSSVLYFFSLPLPAK----------ISAAFLCLSNNIASAIPASYKNVVT 214
L F + + + C+ A+ I A+ V
Sbjct: 200 GEVDALPFTSAPAATNLLNRADRTGRGGRFRELLREKVLIACVGPVTAAPIAAAGLPYV- 258
Query: 215 VACFPKETSLLKLLP 229
+ + +L++L+
Sbjct: 259 MPDRARTGALVRLVA 273
>gi|325916197|ref|ZP_08178481.1| uroporphyrinogen-III synthase [Xanthomonas vesicatoria ATCC 35937]
gi|325537617|gb|EGD09329.1| uroporphyrinogen-III synthase [Xanthomonas vesicatoria ATCC 35937]
Length = 258
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 20/185 (10%), Positives = 45/185 (24%), Gaps = 13/185 (7%)
Query: 53 AITSSESLSTLPANFCRHTPIFAIG----EASACLARQKGFTQIFHGKDNSINLAKIIVE 108
TS ++ P A E +A + G + + ++
Sbjct: 66 VFTSPAAVRAAHQLQPLQRPSQAQWVSVGEGTARALQACGIDAVVRPARMDS---EGLLA 122
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD 168
+ P + + + L + D Y+ + + + L
Sbjct: 123 LPLFAAPLQSVGLITAPGGRGMLAPALEHRGARILRADVYHRVPLRLRPSALHALTDALP 182
Query: 169 AILFYARSS------VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ S+ + + A + S + A + V A P
Sbjct: 183 RSVLAMSSAEALTLVLQQLPAALGEAVRQRPLVASSERLCDAAQEAGFCHVVRAAGPLPD 242
Query: 223 SLLKL 227
L+
Sbjct: 243 QLVAA 247
>gi|302039447|ref|YP_003799769.1| putative uroporphyrinogen III synthase HemD [Candidatus Nitrospira
defluvii]
gi|300607511|emb|CBK43844.1| putative Uroporphyrinogen III synthase HemD [Candidatus Nitrospira
defluvii]
Length = 280
Score = 44.8 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/238 (8%), Positives = 58/238 (24%), Gaps = 31/238 (13%)
Query: 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY------GAIAITSSESLSTLPA 65
A I++ G P++ P I ++ + + + +TL
Sbjct: 19 AAEMTRLIERHGGKPLVAPALREIPLEDNSVALRFGEQLLTEGLDVLVLLTGAGTTTLFE 78
Query: 66 NFCRHTP------------IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ A G + GF + + + +
Sbjct: 79 ILHSRHAKDTIKSALKETVLIARGPKPVAALKALGFQPTLTVPEPNTWVDVVSTLDAHRP 138
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYS---QDIAYPETTMKNLLQNA-DA 169
+ + N + L + + + Y ++ A + +++ +L
Sbjct: 139 VNRLRVAVQEYGLPNRDLVEALKQRGATVVSVPVYRWALPENTAPLKQSIRQILDGQVQV 198
Query: 170 ILFYARSSVLYFFSLPLPAK---------ISAAFLCLSNNIASAIPASYKNVVTVACF 218
+L + + + + + + I + +V
Sbjct: 199 MLVTNAAQIDHVMLVVEQEGKTEEFKTICRKLVIASIGPTASERIRSHGLSVDFEPSH 256
>gi|326804045|ref|YP_004321863.1| hypothetical protein HMPREF9243_1725 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650954|gb|AEA01137.1| conserved domain protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 244
Score = 44.8 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 23/233 (9%), Positives = 53/233 (22%), Gaps = 23/233 (9%)
Query: 18 KIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCR----HTPI 73
++++ GY +P+ + V Q A S + + +
Sbjct: 8 RLEQAGYQVDWLPVIQLESLSQ-VNPLKLQRGDAFFFVSRMAGQAVFKHLPPSDALSQLY 66
Query: 74 FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFED 133
F + ++ + + + +P I P + +
Sbjct: 67 FFSSSQQTGRYLSQNYSIDCQALTQGGTSQEAFRHFQKIKDHYQPRIDRLIVPISPQSQG 126
Query: 134 YLIEHKIP------LRVIDCYYSQD-----IAYPETTMKNLLQNADAILFYARSSVLYFF 182
++ Y Q + + + AI + S+
Sbjct: 127 KYQALGQTYLSDISIQEWIVYQKQVNWKVGQSLQAAIDQASFKEPLAITIASASAWQGLV 186
Query: 183 SLPLPAKISAA-----FLCLSNNIASAIPASY--KNVVTVACFPKETSLLKLL 228
L + + + AI S A L+ L
Sbjct: 187 DLVSLPVLDQKRSAIQLWTIGPLASQAILKSSSQVKPYHEANQSNFAGLVDSL 239
>gi|302544958|ref|ZP_07297300.1| uroporphyrinogen-III synthase domain protein [Streptomyces
hygroscopicus ATCC 53653]
gi|302462576|gb|EFL25669.1| uroporphyrinogen-III synthase domain protein [Streptomyces
himastatinicus ATCC 53653]
Length = 185
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 12/165 (7%), Positives = 37/165 (22%), Gaps = 17/165 (10%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSE 58
+T ++A + + G + P + + L + + T++
Sbjct: 22 VT-AARRADELGALLLRRGAAVLHAPALRIVPLSDDSELLTATKQLIDHAPDVVIATTAI 80
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAKIIVE 108
A+ + + S ++A+++
Sbjct: 81 GFRGWVEAADGWGLGDALLNRLRDIELLARGPKVKGAVRAAGLTEKWSPASESMAEVLDR 140
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
+ + F + L + + Y
Sbjct: 141 LLEEGVDGRRIAVQLHGEPLPGFVESLRAGGAEVVGVPVYRWMPP 185
>gi|253574211|ref|ZP_04851553.1| uroporphyrinogen-III synthase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846688|gb|EES74694.1| uroporphyrinogen-III synthase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 285
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 69/259 (26%), Gaps = 33/259 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMP-----LSYFIHDRESVFLAMQQSYGAIAITS 56
+ +T P +A + ++ MG IP+ P L R + ++ T+
Sbjct: 9 RVALTGPR-RAEELGKLVENMGGIPLYRPAQGTVLLDDQALRSGIVDWVEHPPDWSIFTT 67
Query: 57 SESLSTLPANFC------------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
L L R I A G + +++G T I +D+ +
Sbjct: 68 GMGLDALFDMAQDMGVADQLLERLREENIAARGYKTVNALKKRGLTPI--VRDDDGSTEG 125
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL- 163
+I ++ +L E R + Y E
Sbjct: 126 LIRGLAQHELRGASVLLQLHGDPAPRLVAWLEEQGASCRQLLPYKHIAPPEAELEKLLSD 185
Query: 164 --LQNADAILFYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKN 211
DA+ F + V + + + A+ + +
Sbjct: 186 ILAGEIDAVTFTSGPQVRFLMEHAERQGQLDALLEVLKGPVLAVAVGKVTAAGLYEAGVP 245
Query: 212 VVTVACFPKETSLLKLLPL 230
V + S++ L
Sbjct: 246 RVLAPKEERMGSMMVELAR 264
>gi|92118458|ref|YP_578187.1| uroporphyrinogen III synthase HEM4 [Nitrobacter hamburgensis X14]
gi|91801352|gb|ABE63727.1| Uroporphyrinogen III synthase HEM4 [Nitrobacter hamburgensis X14]
Length = 269
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 23/264 (8%), Positives = 60/264 (22%), Gaps = 36/264 (13%)
Query: 1 MYIVITRPIKKALRT-QEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIA 53
M I++ P + L ++ G + PL + ++ A++ + +
Sbjct: 7 MRIMV--PESRELDLFAAMLEAEGATALRCPLVKILPLHDTAEPDAWIDSAIRGEFDELI 64
Query: 54 ITSSESLST-----------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINL 102
+ + E L A R + + L + S +
Sbjct: 65 LLTGEGLRHLLTISGARRDGFIAALKRMRLTVRGPKPTRALREIGLSPDVTAPVPTSEGV 124
Query: 103 AKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY----SQDIAYPET 158
+ + L L + + Y ++ +
Sbjct: 125 LETFAGADLSGRLIG--AQLYPGGGAEKMVSALRRQGAKVFPVTPYRYASETEMAQVADF 182
Query: 159 TMKNLLQNADAILFYARSSVLYFFSLPLPAKI---------SAAFLCLSNNIASAIPASY 209
+ + F A + + A + + + A+
Sbjct: 183 IHELAAGRMTMVAFTASLQIERLMWVAKEAGLEAQLKLGLSRTPIASVGPVMQKALQKYG 242
Query: 210 KNVVTVAC-FPKETSLLKLLPLRR 232
L++ + R
Sbjct: 243 YEAAVQPENSYHLKPLVRAIARWR 266
>gi|167835848|ref|ZP_02462731.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia thailandensis MSMB43]
Length = 558
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 32/123 (26%), Gaps = 13/123 (10%)
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----NADAILF 172
K + + G + L E + ++ Y + + A L
Sbjct: 43 KRALIVRGDGGREWLAERLREAGADVELVAAYRRVSPEPSIGAWERVHALLSGAPHAWLV 102
Query: 173 YARSSVLYFFSLPLPAK--------ISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ V L A F+ I A + +T++ + +
Sbjct: 103 TSSEGVRNLQELAHEHLNEAEIDALKRAQFVAPHPRIVETARALGFDRITLS-GAGDERI 161
Query: 225 LKL 227
++
Sbjct: 162 VRA 164
>gi|146303003|ref|YP_001190319.1| uroporphyrinogen III synthase HEM4 [Metallosphaera sedula DSM 5348]
gi|145701253|gb|ABP94395.1| Uroporphyrinogen III synthase HEM4 [Metallosphaera sedula DSM 5348]
Length = 224
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 15/211 (7%), Positives = 54/211 (25%), Gaps = 21/211 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKM-GYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M ++ RP + + ++ G+ + + + +A TS +
Sbjct: 1 MRVLYLRPEGSS------LPELPGFSILNVSIFSVKCLEYDNSYL---KSDGVAFTSVNA 51
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ +K + + + + +++ + + + +
Sbjct: 52 VRCFKDFDSIRGKSIFSIGPGTAEELRKHGFESIYPERYTSKDLALLILR----SGVREV 107
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYARSS 177
+ L+ I + Y +K LL D ++ +
Sbjct: 108 SAFRSLKASDDMRRILVS--ILYHEVYDYDLILDEEKLNQVKELLATCSVDVVVLTSSLI 165
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
+ + + ++++
Sbjct: 166 AKSVANFIRDCH---KVVTIGPMTSASLKTL 193
>gi|311111779|ref|YP_003983001.1| uroporphyrinogen-III synthase [Rothia dentocariosa ATCC 17931]
gi|310943273|gb|ADP39567.1| uroporphyrinogen-III synthase [Rothia dentocariosa ATCC 17931]
Length = 299
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 66/284 (23%), Gaps = 65/284 (22%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYI-------PVMMPLS--YFIHDRESVF----LAMQQS 48
+++TR + + + + P+ + S+F LA + +
Sbjct: 3 RVLLTRTAAQGAPFERALNDLAAERGIPKIQVDFAPMQLPRTVAPEYSLFSLVSLAAEGA 62
Query: 49 YGAIAITSSESLS---------TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNS 99
+ TS+ ++ A T I +G A+A R+ G F +
Sbjct: 63 FLWATFTSANAVRSCAELFGTSFAWALRDGGTRIACVGSATARALREIGLEPHFMPEKQD 122
Query: 100 I--NLAKIIVE-------------------------QKVLFTPQKPLIYLGGKPRNFHFE 132
LA+ E + + Q ++ G
Sbjct: 123 ALGMLAEFPTEGANPELGIPESLRKPQNTPESAALGWDDMLSAQANVLVFEGANARPTLR 182
Query: 133 DYLIEHKIPLRVIDCYYSQDIA---------------YPETTMKNLLQNADAILFYARSS 177
+ L+ Y + D I+ A S
Sbjct: 183 EGLVGLGFRAVRAVVYEMVPATASVLEAGEISCVNARELTAGTGSNSAAVDVIIATAPSR 242
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
+ + + + + A A P
Sbjct: 243 LKELVGENPNPERIPPAVAIGSTTARTCEELGLRH-RTADSPTP 285
Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 16/64 (25%), Gaps = 6/64 (9%)
Query: 169 AILFYARSSVLYFFSLPLPA------KISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
F + ++V L + C+ + A A+ +
Sbjct: 65 WATFTSANAVRSCAELFGTSFAWALRDGGTRIACVGSATARALREIGLEPHFMPEKQDAL 124
Query: 223 SLLK 226
+L
Sbjct: 125 GMLA 128
>gi|291006371|ref|ZP_06564344.1| uroporphyrinogen-III synthetase [Saccharopolyspora erythraea NRRL
2338]
Length = 275
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 27/255 (10%), Positives = 65/255 (25%), Gaps = 32/255 (12%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ------QSYGAIAITSSE 58
+T +KA + + G + + + E LA +
Sbjct: 15 VT-AERKAEEIGGLLSRRGARVLYGAAMHTVPLPEDGELASATSEVLSAPVDIAIAITGV 73
Query: 59 SLS----TLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVE 108
AN R + + A+ +G + + A+++
Sbjct: 74 GFRGWLEAAEANGVRDRLVEHLRSATLLARGAKAKGAIRGAGLLEEWTSPAEESAEVLDH 133
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI---AYPETTMKNLLQ 165
++ F+ L + + + Y D + + +L
Sbjct: 134 LLARGVSGARIVLQVHGDPMLRFQSELRDAGAEVVPVTVYRWTDPLDLPALDDLIDAVLA 193
Query: 166 NADAIL-FYARSSVLYFFSLPLPAK----------ISAAFLCLSNNIASAIPASYKNVVT 214
L F + + + C+ A+ I A+ V
Sbjct: 194 GEVDALPFTSAPAATNLLNRADRTGRGGRFRELLREKVLIACVGPVTAAPIAAAGLPYV- 252
Query: 215 VACFPKETSLLKLLP 229
+ + +L++L+
Sbjct: 253 MPDRARTGALVRLVA 267
>gi|255025990|ref|ZP_05297976.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Listeria monocytogenes FSL J2-003]
Length = 419
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 14/162 (8%), Positives = 41/162 (25%), Gaps = 7/162 (4%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLS 61
+++ R E+I+ +G M P + + + TS E++
Sbjct: 252 KVLLPRARAGKSMIAEQIRDLGGEVTMYPNIQVVDVAPTKTREALIEINELLFTSKEAVE 311
Query: 62 TLPANFCRHTPIFAIGEAS------ACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
+ + + I ++I+E
Sbjct: 312 RFFDYLTKLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQK 371
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ G + + ++ + ++ Y + +
Sbjct: 372 NAS-NLIIGSIVDTAEVNAILAEVEAMEMMPLYDMRPVTERP 412
Score = 39.0 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 12/121 (9%), Positives = 33/121 (27%), Gaps = 8/121 (6%)
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
++ + + + + + + Q + T + L + +LF ++
Sbjct: 250 HTKVLLPRARAGKSMIAEQIRDLGGEVTMYP--NIQVVDVAPTKTREALIEINELLFTSK 307
Query: 176 SSVLYFFSLPLPAKI------SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+V FF + + + A + +L+ LP
Sbjct: 308 EAVERFFDYLTKLDLDIRSLKNTHLTAIGKQTKEAFSEKGIIPDSFIKRRSTELILEHLP 367
Query: 230 L 230
Sbjct: 368 R 368
>gi|15604337|ref|NP_220853.1| hypothetical protein RP474 [Rickettsia prowazekii str. Madrid E]
gi|6647954|sp|Q9ZD70|Y474_RICPR RecName: Full=Uncharacterized protein RP474
gi|3861029|emb|CAA14929.1| unknown [Rickettsia prowazekii]
gi|292572090|gb|ADE30005.1| hypothetical protein rpr22_CDS463 [Rickettsia prowazekii Rp22]
Length = 269
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 72/266 (27%), Gaps = 41/266 (15%)
Query: 1 MY-IVITRPIKKALRTQEKIQKMGYI--PVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M +++TR I++ T ++I K + L + ++ + +Y I ITS
Sbjct: 1 MKSVLLTRNIQENNETIQEINKYNLDLRYIHCSLIKYKTLDFNI--NILNNYSNIIITSK 58
Query: 58 ESLSTLPANFCRHTPIFA-----------------------IGEASACLARQKGFTQIFH 94
+ L + + +
Sbjct: 59 YAAHILADYNLKQDIWVVGNKTKQLLGKKVIYTANNIADLIQHFPTDLYKHTIYLSSNEI 118
Query: 95 GKDNSINLAKIIVEQ--KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD 152
+D +A+ I+ + P + +R Y
Sbjct: 119 TQDLPNKIARHIIYNVEYLNELPISIIQEFENIRYFSKPAYRNAFKANTIRATTAYKKVF 178
Query: 153 IAYP-----ETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIA 202
+ + D IL Y+++S L L + + + +S +A
Sbjct: 179 NDPSLGSTYPLEVPLGKMSIDFILLYSQNSAKTLVRLLLQNNLLQYLQDSLVIAISLKVA 238
Query: 203 SAIPASYKNVVTVACFPKETSLLKLL 228
+ + + V ++KLL
Sbjct: 239 NIVR-PFIKNVVYCDNQSPHDIIKLL 263
>gi|307717100|gb|ADN88603.1| uroporphyrinogen-III synthase [Listeria seeligeri]
Length = 165
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 7/164 (4%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC--RHTPIFAIGEASACLARQKGF 89
VF + QQ+ I TS ++ + IGE + G
Sbjct: 1 IETKPQNV-VFTSEQQNVEWIFFTSVNAVEYFFKQHKVTKSYKYAVIGEKTKEKLADYGH 59
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
+ F + E + + ++ ED L E + ++ Y
Sbjct: 60 SPSFIPTLY--QTEPFLSEWLEKYPEKTSILLPKSNLSRTVMEDTLKEKGYVIFPVELYE 117
Query: 150 SQDIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPAKIS 191
+ ++ +K L I+F + S+ F+S+
Sbjct: 118 TIFPTKSKSLLKQLFTQNENQIIIFASPSAWKNFYSVAENFPSQ 161
>gi|195927526|pdb|3D8R|A Chain A, Thermus Thermophilus Uroporphyrinogen Iii Synthase
gi|195927527|pdb|3D8S|A Chain A, Thermus Thermophilus Uroporphyrinogen Iii Synthase
gi|196049808|pdb|3D8N|A Chain A, Uroporphyrinogen Iii Synthase-Uroporphyringen Iii Complex
gi|196049809|pdb|3D8T|A Chain A, Thermus Thermophilus Uroporphyrinogen Iii Synthase
gi|196049810|pdb|3D8T|B Chain B, Thermus Thermophilus Uroporphyrinogen Iii Synthase
Length = 286
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 54/242 (22%), Gaps = 27/242 (11%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSESLS------- 61
+ +K+G+ P++ P+ + Q T+ +
Sbjct: 45 EEFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRELAQGVDLFLATTGVGVRDLLEAGK 104
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
L + A AR + ++ +
Sbjct: 105 ALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGDGTSKSLLPLLP---QGRGVAAL 161
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
E+ L E + + Y ++ DA+ F A V
Sbjct: 162 QLYGKPLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEAVLRGEVDALAFVAAIQVE 221
Query: 180 YFFSLPLPA-------KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK----LL 228
+ F L + A A+ V + SLL+ L
Sbjct: 222 FLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQGFKRAL 281
Query: 229 PL 230
Sbjct: 282 QK 283
>gi|77462048|ref|YP_351552.1| hypothetical protein RSP_6208 [Rhodobacter sphaeroides 2.4.1]
gi|77386466|gb|ABA77651.1| hypothetical protein RSP_6208 [Rhodobacter sphaeroides 2.4.1]
Length = 247
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 61/234 (26%), Gaps = 18/234 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIP--VMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+++TRP + R + V PL ++ L A+ TS +
Sbjct: 12 VLLTRPEAQGARFAAAPAEALGPVRLVTSPLMVPAFLVPAIPLRP----DALIFTSETGV 67
Query: 61 ----STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ +G +A + ++ A+ ++ +
Sbjct: 68 EGYRRLAAPELSDVRRAWCVGNRTA-----RAAEAAGLAAHSAEGDAERLIAAILAADEP 122
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-TMKNLLQNADAILFYAR 175
PL++L G L + Y + ++
Sbjct: 123 GPLLHLRGAESRGEVAPRLAAAGLTAAEAVVYDQRPQPLSSEARALLTDGAPVIAPLFSP 182
Query: 176 SSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ +S +A A A ++VA P +LL+
Sbjct: 183 RTARLLAQELARIGGTGPLWVAAMSPAVAEAAAALPVARLSVAARPDAEALLQA 236
>gi|332186978|ref|ZP_08388719.1| hypothetical protein SUS17_2035 [Sphingomonas sp. S17]
gi|332012988|gb|EGI55052.1| hypothetical protein SUS17_2035 [Sphingomonas sp. S17]
Length = 227
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 27/229 (11%), Positives = 65/229 (28%), Gaps = 19/229 (8%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
M IV+ RP T ++ G +P F+ ++ A+ TS++ +
Sbjct: 1 MAIVVIRPEPGHAATIAALEDAGLAARSLPF--FVARALDWTPPDPKTIDALLFTSAQGV 58
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ L+ ++
Sbjct: 59 RLAGPGLAGL-----------AARPVIAVGPATAAAARAAGLSVVLTGDTDAAAVVATAH 107
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
G + + +R Y ++ +A P T+++L +L ++ +
Sbjct: 108 ARGFERLLHLAGRDRVATGAMVR--IVYAAEAVAIPLETVRSLAGE--IVLLHSARAAAR 163
Query: 181 FFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
A + L + +A + V +A P++ +++
Sbjct: 164 LAERVDAAGLARDTIALVAISAKTAAAAGNGWRAVALAEAPRDDAMIAA 212
>gi|289641435|ref|ZP_06473599.1| uroporphyrin-III C-methyltransferase [Frankia symbiont of Datisca
glomerata]
gi|289508771|gb|EFD29706.1| uroporphyrin-III C-methyltransferase [Frankia symbiont of Datisca
glomerata]
Length = 676
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 28/108 (25%), Gaps = 6/108 (5%)
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA--DAILFYARSSVLYFFSLPLPA 188
+ A P+ + +++ A+ F + ++V +L
Sbjct: 550 CASASPPAGAETVRRISLLTDVDAEPDPRIVEEIRHGDLHAVAFASSTAVRATVALYGSL 609
Query: 189 KISAAFLCLSNNIASAIPASYKNVVTVACFPKE----TSLLKLLPLRR 232
+ A + V VA P ++ + R
Sbjct: 610 PDGIMVAAIGRRTVEACRHAGVRVDAVATEPGIHPLAAAVADAVTRAR 657
Score = 39.8 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV-FLAMQQSYGAI 52
+++ R + +++ +G V +S + LA A+
Sbjct: 362 RVLVPRTRPRPGLLATRLRALGADAVESTVSRPGPVADPAPLLAALTDADAL 413
>gi|55980640|ref|YP_143937.1| uroporphyrinogen-III synthase [Thermus thermophilus HB8]
gi|55772053|dbj|BAD70494.1| probable uroporphyrinogen-III synthase [Thermus thermophilus HB8]
Length = 253
Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 55/234 (23%), Gaps = 23/234 (9%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSESLS------- 61
+ +K+G+ P++ P+ A+ Q T+ +
Sbjct: 12 EAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTGVGVRDLLEAGK 71
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
L + A AR + ++ +
Sbjct: 72 ALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGDGTSKSLLPLLP---QGRGVAAL 128
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSSVL 179
E+ L E + + Y ++ L DA+ F A V
Sbjct: 129 QLYGKPLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEALLRGEVDALAFVAAIQVE 188
Query: 180 YFFSLPLPA-------KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F L + A A+ V + SLL+
Sbjct: 189 FLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQ 242
>gi|56966760|pdb|1WD7|A Chain A, Crystal Structure Of Uroporphyrinogen Iii Synthase From An
Extremely Thermophilic Bacterium Thermus Thermophilus
Hb8 (Wild Type, Native, Form-2 Crystal)
gi|56966761|pdb|1WD7|B Chain B, Crystal Structure Of Uroporphyrinogen Iii Synthase From An
Extremely Thermophilic Bacterium Thermus Thermophilus
Hb8 (Wild Type, Native, Form-2 Crystal)
gi|67464623|pdb|1WCW|A Chain A, Crystal Structure Of Uroporphyrinogen Iii Synthase From An
Extremely Thermophilic Bacterium Thermus Thermophilus
Hb8 (Wild Type, Native, Form-1 Crystal)
Length = 261
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 55/234 (23%), Gaps = 23/234 (9%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSESLS------- 61
+ +K+G+ P++ P+ A+ Q T+ +
Sbjct: 20 EAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTGVGVRDLLEAGK 79
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
L + A AR + ++ +
Sbjct: 80 ALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGDGTSKSLLPLLP---QGRGVAAL 136
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSSVL 179
E+ L E + + Y ++ L DA+ F A V
Sbjct: 137 QLYGKPLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEALLRGEVDALAFVAAIQVE 196
Query: 180 YFFSLPLPA-------KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F L + A A+ V + SLL+
Sbjct: 197 FLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQ 250
>gi|326571837|gb|EGE21843.1| uroporphyrinogen-III synthase [Moraxella catarrhalis BC7]
Length = 252
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 62/242 (25%), Gaps = 27/242 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLA------MQQSYGAIAITS 56
++ TRP + ++ G + +PL + A + Y + +TS
Sbjct: 6 LINTRPKHRGQAIRQM---TGMPVIDLPLLDIQTLPMTETKASMMRAWLDYDYDVLVVTS 62
Query: 57 SESLSTLPANFCRHTPIFAIGEA----------SACLARQKGFTQIFHGKDNSINLAKII 106
ES + A + N +
Sbjct: 63 VESARRALEYLDKLHGGHHWQSKLPNAPIVAVGLATAKVLTDRGLSVVLPRVTNNEGMLA 122
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL-- 164
+ + ++ G + L + + VI Y + L
Sbjct: 123 MTEIRSLISGSRVLIWRGAGGRKLLHETLKARGVQIDVIRWYERFIPMDLMDNFQKNLKI 182
Query: 165 --QNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVT---VACFP 219
+ AD + + + L +L L + + I A +V+ V P
Sbjct: 183 INEKADVFVIISSEMAYQAWRRLL-HHRQYHYLALGERLKNIIHAYEPDVMVDELVTLEP 241
Query: 220 KE 221
E
Sbjct: 242 TE 243
>gi|126460937|ref|YP_001042051.1| uroporphyrinogen III synthase HEM4 [Rhodobacter sphaeroides ATCC
17029]
gi|126102601|gb|ABN75279.1| Uroporphyrinogen III synthase HEM4 [Rhodobacter sphaeroides ATCC
17029]
Length = 247
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 61/234 (26%), Gaps = 18/234 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIP--VMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+++TRP + R + + V PL ++ L A+ TS +
Sbjct: 12 VLLTRPEAQGARFAAALAEALGPVRLVTSPLMAPAFLVPAIPLRP----DALIFTSETGV 67
Query: 61 ----STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ +G +A + ++ A+ ++ +
Sbjct: 68 EGYRRLAAPELSDVRRAWCVGNRTA-----RAAEAAGLAAHSAEGDAERLIAAILAADEP 122
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-TMKNLLQNADAILFYAR 175
PL++L G L + Y + ++
Sbjct: 123 GPLLHLRGAESRGEVAPRLAAAGLTAAEAVVYDQRPQPLSSEARALLTDGAPVIAPLFSP 182
Query: 176 SSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ +S +A A A ++VA P +LL
Sbjct: 183 RTARLLAQELARIGGTGPLWVAAMSPAVAEAAAALPVARLSVAARPDAEALLHA 236
>gi|121608026|ref|YP_995833.1| uroporphyrinogen III synthase [Verminephrobacter eiseniae EF01-2]
gi|121552666|gb|ABM56815.1| uroporphyrinogen III synthase [Verminephrobacter eiseniae EF01-2]
Length = 282
Score = 44.0 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 71/276 (25%), Gaps = 49/276 (17%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ-----------SYG 50
+++TRP ++A ++ G +PL + + Y
Sbjct: 5 RVIVTRPAREAAHWVAQLGAHGISAAALPLIAIAPCTDPAAQQALRAARAQLAHQRPPYR 64
Query: 51 AIAITSSESLSTLPANFC------------RHTPIFAIGEASA----CLARQKGFTQIFH 94
A+ SS +++ A+ T +A G +A +
Sbjct: 65 ALMFVSSNAVAHFFASDEGPLAPAAQALGATKTRAWAPGPGTACALLQAGIARQCIDRPA 124
Query: 95 GKDNSINLAKIIVEQKVLFTPQKPL-----------------IYLGGKPRNFHFEDYLIE 137
+ + + + P + G +
Sbjct: 125 PEAAQFDSRALWQQVAAQVRPGDRVLIVHGRSRGAPASAQDHQGRQGHQGRDWLARQIGA 184
Query: 138 HKIPLRVIDCYYSQDIAYPETTM---KNLLQNADAILFYARSSVLYFF-SLPLPAKISAA 193
++ + Y + + Q+ L + ++ + +LP +A
Sbjct: 185 AGGQVQWLPAYERSAPRLSAAELTLARQAAQDGSVWLLSSAEALAHLATALPAQRWTAAQ 244
Query: 194 FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
L IA A A+ V P +L +
Sbjct: 245 ALATHPRIAQAARAAGFGRVREC-RPALREVLASIE 279
>gi|311087478|gb|ADP67558.1| uroporphyrinogen-III synthase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 105
Score = 43.7 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 28/104 (26%), Gaps = 4/104 (3%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLS----YFIHDRESVFLAMQQSYGAIAITS 56
M I++ RP + K+G L F S + I + S
Sbjct: 1 MKILVIRPSPTGEELVYNLNKIGISSWHFSLFDFYPSFSPISLSKKINELYQSKVILVFS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSI 100
+++ + + + + + + K N
Sbjct: 61 KKAIYYTNLYLKSNNLQWPLHAKYYAIGKSTALFLFNYIKKNYF 104
>gi|46198620|ref|YP_004287.1| uroporphyrinogen-III synthase [Thermus thermophilus HB27]
gi|46196243|gb|AAS80660.1| uroporphyrinogen-III synthase [Thermus thermophilus HB27]
Length = 253
Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 53/234 (22%), Gaps = 23/234 (9%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSESLS------- 61
+ +K+G+ P++ P+ + Q T+ +
Sbjct: 12 EEFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRELAQGVDLFLATTGVGVRDLLEAGK 71
Query: 62 TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIY 121
L + A AR + ++ +
Sbjct: 72 ALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGDGTSKSLLPLLP---QGRGVAAL 128
Query: 122 LGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSSVL 179
E+ L E + + Y ++ DA+ F A V
Sbjct: 129 QLYGKPLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEAVLRGEVDALAFVAAIQVE 188
Query: 180 YFFSLPLPA-------KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F L + A A+ V + SLL+
Sbjct: 189 FLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQ 242
>gi|46124019|ref|XP_386563.1| hypothetical protein FG06387.1 [Gibberella zeae PH-1]
Length = 332
Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 20/233 (8%), Positives = 50/233 (21%), Gaps = 34/233 (14%)
Query: 34 FIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF 93
+ + + + A S + N ++ A A A +
Sbjct: 98 VEDGKAAKTNIVSHATDATTGPSETTSWPHLQNVPVYSVGPATTRALAAAPQDPPLQVFG 157
Query: 94 HGKDNSINLAKIIVEQKVLFTPQK-----PLIYLGGKPRNFHFEDYLIEHK-------IP 141
N LA I+ + + P + ++ I
Sbjct: 158 SHTGNGAALAPYILAHYYEWYRDQARLTLPPLLFLVGETRRDIIPKTLQDGALPDTERIR 217
Query: 142 LRVIDCYYSQDIAYPETTMKNLL-----QNADAILFYARSSVLYFFSLPLPAKISAA--- 193
+ Y + + ++ +L I+ ++ + +
Sbjct: 218 VNETVVYGTGVMESFPVDLRRVLGETRDDPVRWIVVFSPTGCDSMLRVMGILDAETNKVY 277
Query: 194 ----------FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP----LRR 232
+ + + A P +L + RR
Sbjct: 278 KGYKRDGKTFIATIGPTTRDHLQSFGFEPDVCAESPTPRGVLDGIQEFMSKRR 330
>gi|169837031|ref|ZP_02870219.1| UROPORPHYRINOGEN-III SYNTHASE [candidate division TM7 single-cell
isolate TM7a]
Length = 89
Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 7/78 (8%), Positives = 20/78 (25%), Gaps = 8/78 (10%)
Query: 157 ETTMKNLLQNADAILFYARSSVLYFF--------SLPLPAKISAAFLCLSNNIASAIPAS 208
+ + ++ +D + F + S+ F + + + I
Sbjct: 3 KEKAEKYIKESDILTFLSSSTFKAFADSIKLSENEEIKEILKNKVIASIGPVTSKTIEKY 62
Query: 209 YKNVVTVACFPKETSLLK 226
+ E L +
Sbjct: 63 GLKIGIEGKKYTEEGLFQ 80
>gi|229366494|gb|ACQ58227.1| Uroporphyrinogen-III synthase [Anoplopoma fimbria]
Length = 148
Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 49/132 (37%), Gaps = 16/132 (12%)
Query: 1 MYIVITRPIKKAL----RTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIA 53
M++++ + + ++++ G+ ++P+ F + L + +G +
Sbjct: 1 MHVLLLKEPRDGESGPDPYIKELESHGHKATLIPVLSFKFVSLNTLSDKLFQPEKHGGLI 60
Query: 54 ITSSESLST---------LPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
TS L + I+ +G+A+A R G + + L+
Sbjct: 61 FTSPMCLEADERREEWNSSVKDKWNSKSIYVVGKATAAAVRNLGLNPLGEDTGTADVLSS 120
Query: 105 IIVEQKVLFTPQ 116
+I+E++ P
Sbjct: 121 LIIEREDTNIPP 132
>gi|67464624|pdb|1WCX|A Chain A, Crystal Structure Of Mutant Uroporphyrinogen Iii Synthase
From An Extremely Thermophilic Bacterium Thermus
Thermophilus Hb8 (L75mI193ML248M, SEMET DERIVATIVE,
FORM- 1 Crystal)
Length = 261
Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 57/226 (25%), Gaps = 29/226 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDR----ESVFLAMQQSYGAIAITSSESLSTLPANFC 68
+ +K+G+ P++ P+ A+ Q T+ + L
Sbjct: 20 EAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTGVGVRDLXEAGK 79
Query: 69 R----------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
A G +A ++ G G S +L ++ + +
Sbjct: 80 ALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGDGTSKSLLPLLPQ------GRGV 133
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARS 176
E+ L E + + Y ++ L DA+ F A
Sbjct: 134 AALQLYGKPLPLLENALAERGYRVLPLXPYRHLPDPEGILRLEEALLRGEVDALAFVAAX 193
Query: 177 SVLYFFSLPLPA-------KISAAFLCLSNNIASAIPASYKNVVTV 215
V + F L + A A+ V
Sbjct: 194 QVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYV 239
>gi|311086888|gb|ADP66969.1| uroporphyrinogen-III synthase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 111
Score = 43.3 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 24/87 (27%), Gaps = 4/87 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLS----YFIHDRESVFLAMQQSYGAIAITS 56
M I++ RP + K+G L F S + I + S
Sbjct: 1 MKILVIRPSPTGEELVYNLNKIGISSWHFSLFDFYPSFSPISLSKKINELYQSKVILVFS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACL 83
+++ + + + +
Sbjct: 61 KKAIYYTNLYLKSNNLQWPLHAKYYAI 87
>gi|257471642|ref|ZP_05635641.1| uroporphyrinogen-III synthase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|311086314|gb|ADP66396.1| uroporphyrinogen-III synthase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311087960|gb|ADP68039.1| uroporphyrinogen-III synthase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 115
Score = 43.3 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 24/87 (27%), Gaps = 4/87 (4%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLS----YFIHDRESVFLAMQQSYGAIAITS 56
M I++ RP + K+G L F S + I + S
Sbjct: 1 MKILVIRPSPTGEELVYNLNKIGISSWHFSLFDFYPSFSPISLSKKINELYQSKVILVFS 60
Query: 57 SESLSTLPANFCRHTPIFAIGEASACL 83
+++ + + + +
Sbjct: 61 KKAIYYTNLYLKSNNLQWPLHAKYYAI 87
>gi|255030811|ref|ZP_05302762.1| hypothetical protein LmonL_19936 [Listeria monocytogenes LO28]
Length = 67
Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Query: 176 SSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
SV + + + L + ++ + + N A SL++L+
Sbjct: 1 RSVQNLLDVLTIEEKAILQTKTILSIGRFTSATLASFGMNNFIEAESATPESLIELIQKT 60
Query: 232 R 232
+
Sbjct: 61 K 61
>gi|288556740|ref|YP_003428675.1| uroporphyrinogen-III synthase [Bacillus pseudofirmus OF4]
gi|288547900|gb|ADC51783.1| uroporphyrinogen-III synthase [Bacillus pseudofirmus OF4]
Length = 270
Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 28/248 (11%), Positives = 65/248 (26%), Gaps = 32/248 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS-----YGAIAITSSESLSTLPANF 67
I+K G ++ P+ ++ + ++ + +T+ L
Sbjct: 19 EEMSTLIEKQGGNVIVRPMQGTVYVAKEEIVSELKEMIDQGVDWFVLTTGIGTEKLVELA 78
Query: 68 C------------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
RH I A G + ++ G T +D + N +I +
Sbjct: 79 EEIGLKDELIERLRHAKIAARGYKTKNALKKLGLTADISDEDGTTN--GLIRAMESNSFK 136
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ---NADAILF 172
+ + + + + + + Y + DA+ F
Sbjct: 137 GSKVAVQLHGIPSPNLRTFFESEEAEVVEVLPYRHIAPDEEKVKTLYEEVVEGKVDAVCF 196
Query: 173 YARSSVLYFFS----------LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
V F L + + + A A+ + V V +
Sbjct: 197 TTFLQVRALFQYAESIKKEETLLNQFNKNVLAVAVGKVTAEALTDAQVTRVIVPERERMG 256
Query: 223 SLLKLLPL 230
+++ L
Sbjct: 257 AMIIELAK 264
>gi|303244839|ref|ZP_07331167.1| Uroporphyrinogen III synthase HEM4 [Methanothermococcus okinawensis
IH1]
gi|302484789|gb|EFL47725.1| Uroporphyrinogen III synthase HEM4 [Methanothermococcus okinawensis
IH1]
Length = 147
Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 8/111 (7%), Positives = 30/111 (27%), Gaps = 14/111 (12%)
Query: 135 LIEHKIPLRVIDCYYSQDIAYPETTMKNLL---------QNADAILFYARSSVLYFFSLP 185
++ + +I Y S++ + +K L + F + + FF
Sbjct: 35 ILHKNLNADIIYVYSSEEPNNLKDKLKELKDIIIEEEKNNKKIILTFTSGLTAKNFFKNS 94
Query: 186 LPAKISAA----FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+ + + + + +++++ +
Sbjct: 95 DDELFNLLKNHYIVSIGPITNRIVEHYGFKG-YIPNEYTVEGMIEVIKSLK 144
>gi|259481737|tpe|CBF75539.1| TPA: uroporphyrinogen-III synthase (UroS), putative
(AFU_orthologue; AFUA_6G12800) [Aspergillus nidulans
FGSC A4]
Length = 310
Score = 42.9 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 67/244 (27%), Gaps = 51/244 (20%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC-----------RHTPIFAIGEAS 80
+ + S+ + YG + TS ++ R+ P++ +G A+
Sbjct: 53 IKHLFENGSLAPGRDRQYGGLIFTSQRAVEAFGETLSGVEESYLISSSRNLPLYTVGPAT 112
Query: 81 AC--------------LARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKP 126
A + + + + + +Q+ +KPL++L G+
Sbjct: 113 ARSLTTLRDRYLPHATIHGAETGNGENLAQFMLEHYNALFFQQEGQQAQKKPLLFLVGET 172
Query: 127 RNFHFEDYLIEHKIP------LRVIDCYYSQDIAYPETTMKNLLQNAD--------AILF 172
R L+ + + + Y + + E + +LQ+ ++
Sbjct: 173 RRDIIPKTLMGASVNPERRIGVEEVVVYETGVVEGFEGDFERVLQDCYNDIEDGMIWVVV 232
Query: 173 YARSSVLYFFSLPLPAKISAA-----------FLCLSNNIASAI-PASYKNVVTVACFPK 220
++ + + + A + + A P
Sbjct: 233 FSPTGCDAMVRVLRQKEARIAGENGKGARKLFVATIGPTTRDHLVKEYGFEPDVCAAKPS 292
Query: 221 ETSL 224
+
Sbjct: 293 PEGV 296
>gi|257460286|ref|ZP_05625389.1| uroporphyrinogen-III synthase [Campylobacter gracilis RM3268]
gi|257442351|gb|EEV17491.1| uroporphyrinogen-III synthase [Campylobacter gracilis RM3268]
Length = 214
Score = 42.9 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 10/169 (5%)
Query: 43 LAMQQSYGAIAITSSESLSTLPANFCRHT---PIFAIGEASACLARQKGFTQIFHGKDNS 99
++ A+ TS +++ + N P++AIGE A AR+ GF I+ +
Sbjct: 32 FSLPAQASALIFTSKNAVAAIKFNEISPDLDTPVYAIGEPCAAAAREFGFRDIYTARHGH 91
Query: 100 INLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETT 159
+ F +YL + E L + L+ + Y + ++ P
Sbjct: 92 ---GNEFAAEIAPFLQGAYALYLRARETVSKLEQILSSAGVRLQSMIAYENSILSLPAA- 147
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
++F + +V F + S +C+ AS +
Sbjct: 148 --AKPPQGSTLIFTSPKNVRGFTANFGWDG-SYKAICIGKTTASFLSEF 193
Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 17/50 (34%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
A++F ++++V + + + A+A + A
Sbjct: 40 ALIFTSKNAVAAIKFNEISPDLDTPVYAIGEPCAAAAREFGFRDIYTARH 89
>gi|67526521|ref|XP_661322.1| hypothetical protein AN3718.2 [Aspergillus nidulans FGSC A4]
gi|40740736|gb|EAA59926.1| hypothetical protein AN3718.2 [Aspergillus nidulans FGSC A4]
Length = 779
Score = 42.9 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 67/244 (27%), Gaps = 51/244 (20%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC-----------RHTPIFAIGEAS 80
+ + S+ + YG + TS ++ R+ P++ +G A+
Sbjct: 522 IKHLFENGSLAPGRDRQYGGLIFTSQRAVEAFGETLSGVEESYLISSSRNLPLYTVGPAT 581
Query: 81 AC--------------LARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKP 126
A + + + + + +Q+ +KPL++L G+
Sbjct: 582 ARSLTTLRDRYLPHATIHGAETGNGENLAQFMLEHYNALFFQQEGQQAQKKPLLFLVGET 641
Query: 127 RNFHFEDYLIEHKIP------LRVIDCYYSQDIAYPETTMKNLLQNAD--------AILF 172
R L+ + + + Y + + E + +LQ+ ++
Sbjct: 642 RRDIIPKTLMGASVNPERRIGVEEVVVYETGVVEGFEGDFERVLQDCYNDIEDGMIWVVV 701
Query: 173 YARSSVLYFFSLPLPAKISAA-----------FLCLSNNIASAI-PASYKNVVTVACFPK 220
++ + + + A + + A P
Sbjct: 702 FSPTGCDAMVRVLRQKEARIAGENGKGARKLFVATIGPTTRDHLVKEYGFEPDVCAAKPS 761
Query: 221 ETSL 224
+
Sbjct: 762 PEGV 765
>gi|116619331|ref|YP_821487.1| uroporphyrinogen III synthase HEM4 [Candidatus Solibacter usitatus
Ellin6076]
gi|116222493|gb|ABJ81202.1| Uroporphyrinogen III synthase HEM4 [Candidatus Solibacter usitatus
Ellin6076]
Length = 279
Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 65/246 (26%), Gaps = 29/246 (11%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAITSSESLSTLP 64
+A + I + G IP + P + V + + +S L+ L
Sbjct: 15 RAREMETLILREGGIPFVAPSVKERAVDDDSAAIHFVEQLEAGEFEMLICMTSVGLTLLR 74
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT---------P 115
+ P + A + + +++ + +
Sbjct: 75 DTVTKQMPSERLSAALRRVTIVSRGPKPVGVLKALEVPIHLVIPEPNTWKEIVEAVASRH 134
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY----PETTMKNLLQNADAIL 171
++ + N L + + Y + E + + D +L
Sbjct: 135 ERRIAVQEYGRPNLEMNQALERLGCRVTPVALYRWELPDDVRPLREAAARLAAREFDVVL 194
Query: 172 FYARSSVLYFFSLPLPAKI----------SAAFLCLSNNIASAIPASYKNVVTVACFPKE 221
F + + + + + + + SA+ A + + PK
Sbjct: 195 FTSSIQLDHLLQIARTLGLEQEVCRAMRHDVVVASIGAVMTSALIAHGRPPDVIPKHPKM 254
Query: 222 TSLLKL 227
SL+K
Sbjct: 255 WSLVKA 260
>gi|225708462|gb|ACO10077.1| Uroporphyrinogen-III synthase [Osmerus mordax]
Length = 145
Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 7/93 (7%)
Query: 1 MYIVITR-PIKKAL---RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQ---QSYGAIA 53
M +++ + P + +++ G+ ++P+S F + L YG +
Sbjct: 1 MRVLLLKEPREGDSGPDPYIQELASYGHTAKLIPVSSFKLMSLNTLLDKLFQPDKYGGLI 60
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQ 86
TS ++ +
Sbjct: 61 FTSPRAVEAVNMCLKVEERKQEWNSHVKDKWNA 93
>gi|319785719|ref|YP_004145194.1| uroporphyrinogen III synthase HEM4 [Pseudoxanthomonas suwonensis
11-1]
gi|317464231|gb|ADV25963.1| Uroporphyrinogen III synthase HEM4 [Pseudoxanthomonas suwonensis
11-1]
Length = 258
Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 52/237 (21%), Gaps = 16/237 (6%)
Query: 7 RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSY---GAIAITSSESLS-- 61
RP + + G + + R+ LA A+ TS ++
Sbjct: 22 RPAGGHDGMRRAAARHGGRLLALSPWALRPVRDDAALATLDQALACEAVLFTSPAAVQLA 81
Query: 62 -TLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
L R + + A ++ + V +
Sbjct: 82 ARLRPLRPRPGQAWLAVGSGGAAALRRAGVARVQAPQRMDSEG---VLALPALAAPASVG 138
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ--NADAILFYARSSV 178
+ L + D Y + + + L I + ++
Sbjct: 139 LVTAPGGRGVIAPTLEARGARVVRADVYRREPLPPAARALAALRALRQPACIALSSGEAL 198
Query: 179 LYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ S +A V A P+ +L L +
Sbjct: 199 ELVLDTWPADATAALSGCSVAAASERLAGLARERGFRRVGSAGSPRPGAL-AALAQQ 254
>gi|94971862|ref|YP_593902.1| uroporphyrinogen III synthase HEM4 [Deinococcus geothermalis DSM
11300]
gi|94553913|gb|ABF43828.1| Uroporphyrinogen III synthase HEM4 [Deinococcus geothermalis DSM
11300]
Length = 277
Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 24/235 (10%), Positives = 54/235 (22%), Gaps = 28/235 (11%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ------SYGAIAITSSESLSTLP 64
+A I+K G + + P S LA + A+A +
Sbjct: 16 RAEEMATLIRKYGGVATVAPSLREQKLDLSAHLARFEAGLAAADIHAVACMTGVGTQLFL 75
Query: 65 ANFCRHTPIFAIGEASAC--------LARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ P + K F ++ P
Sbjct: 76 RDLAARDPRRLEQLKTVSLLARGNKPAQVLKTFGLTGTLVPRPHTWHELQHHLLTQLKPG 135
Query: 117 KPLIYLGGKPRNF-HFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL----LQNADAIL 171
+ ++ L L + + + Y + + L D +L
Sbjct: 136 QHVVILEYGDTAPAVMLRTLSAAGLRVTSVPVYRCVFPHDTAPLSRAVRDTALGGQDILL 195
Query: 172 FYARSSVLYFFSL---------PLPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
+ + +L+F A + + + + ++ A
Sbjct: 196 LSSGTQLLHFLKFAERLRLEAEVRAALARMVVVSIGPACSESAAELQVHIDLEAN 250
>gi|324999544|ref|ZP_08120656.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Pseudonocardia sp. P1]
Length = 278
Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 19/241 (7%), Positives = 49/241 (20%), Gaps = 31/241 (12%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL------AMQQSYGAIAITS 56
I IT ++A +++ G + + L + T+
Sbjct: 24 IGIT-AARRAEELATMLERRGACIQHGAALRIVALADDHDLETRTRELVAAPPDITVATT 82
Query: 57 SESLSTLPANFCRH----------TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ + + S + A+++
Sbjct: 83 GIGYRGWIEAADGWGLGEDLLTALGRSEMLARGPKARGAIRASGLVDAWSPESESTAEVL 142
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--- 163
+ + + L + + Y + +
Sbjct: 143 EHLLERGVEGRRIAVQLHGEPLPDVVEALELAGAEVVTVPVYRWAPPVDIAPLDRLIDAT 202
Query: 164 -LQNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYKNV 212
D + F + + L + LC+ A+ + A
Sbjct: 203 LAGGIDVLSFTSAPAAAGILARAAERGVRDELLTALRGPVLTLCVGPVTAAPLEALDVPT 262
Query: 213 V 213
V
Sbjct: 263 V 263
>gi|66811628|ref|XP_639993.1| hypothetical protein DDB_G0285009 [Dictyostelium discoideum AX4]
gi|60466924|gb|EAL64968.1| hypothetical protein DDB_G0285009 [Dictyostelium discoideum AX4]
Length = 383
Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 19/158 (12%), Positives = 35/158 (22%), Gaps = 49/158 (31%)
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM--------KNLLQNADAILF 172
Y G R YL + I L+ + Y SQ + ++ ++F
Sbjct: 220 YFCGNQRREELPLYLKNNNIQLKELVTYQSQTSDDSINDILNLIKRVLQSNKMEIYWLVF 279
Query: 173 YARSSVLYFFSLPLPAK-----------------------------------------IS 191
++ S V +
Sbjct: 280 FSPSGVDFVLETIDNQLSALSLPRTSIFNNNNNNNNDNNNNNNNNNNNNNNNNNNNNNNK 339
Query: 192 AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+ + + V V+ FP SL +
Sbjct: 340 IKVAAIGKTTENCLKTHNIKVDIVSPFPNAESLFSAIS 377
>gi|237752596|ref|ZP_04583076.1| uroporphyrinogen-III synthase [Helicobacter winghamensis ATCC
BAA-430]
gi|229376085|gb|EEO26176.1| uroporphyrinogen-III synthase [Helicobacter winghamensis ATCC
BAA-430]
Length = 234
Score = 42.5 bits (98), Expect = 0.042, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 61/203 (30%), Gaps = 16/203 (7%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPA--------NFCRHTPIFAI 76
+++PL Q+ ++ TS ++ L N P F I
Sbjct: 20 RVLILPLITLQTQFIENLQEKLQACDSLIFTSKNAIIALNENLQSKGLKNLWESLPNFVI 79
Query: 77 GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLI 136
G+ SA G F + ++ + K +++ + + L
Sbjct: 80 GQGSANALIALGLKADFIAS---SAYGDVFAQELIPLLKGKKPLFVRAEKIASKIPEILR 136
Query: 137 EHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLC 196
E+ I L+ I Y + LQ I+F A S + F L + S LC
Sbjct: 137 ENGIALQEIIVYKNILKILENPP---ELQKDSIIVFSAPSHIRAFL-LNFTWRDSFCALC 192
Query: 197 LSNNIASAIPASYKNVVTVACFP 219
L + + P
Sbjct: 193 LGASTKKVAEQL-LKNAKILQSP 214
>gi|332559975|ref|ZP_08414297.1| uroporphyrinogen-III synthase [Rhodobacter sphaeroides WS8N]
gi|332277687|gb|EGJ23002.1| uroporphyrinogen-III synthase [Rhodobacter sphaeroides WS8N]
Length = 247
Score = 42.5 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 60/234 (25%), Gaps = 18/234 (7%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIP--VMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
+++TRP + R + + V PL ++ L A+ TS +
Sbjct: 12 VLLTRPEAQGARFAAALAEALGAVRLVTSPLMVPAFLVPAIPLRP----DALIFTSETGV 67
Query: 61 ----STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ +G +A ++ A+ ++ +
Sbjct: 68 EGYRRLAAPELSDVRRAWCVGNRTA-----CAAEAAGLAAHSAEGDAERLIAAILAADEP 122
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET-TMKNLLQNADAILFYAR 175
PL++L G L + Y + ++
Sbjct: 123 GPLLHLRGAESRGEVAPRLAAAGLTAAEAVVYDQRPQPLSSEARALLTDGAPVIAPLFSP 182
Query: 176 SSVLYFFSLPLPAKI--SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ +S +A A A ++VA P +LL
Sbjct: 183 RTARLLAQELARIGGTGPLWVAAMSPAVAEAAAALPVARLSVAARPDAEALLHA 236
>gi|71064671|ref|YP_263398.1| uroporphyrinogen-III synthase [Psychrobacter arcticus 273-4]
gi|71037656|gb|AAZ17964.1| possible uroporphyrinogen-III synthase [Psychrobacter arcticus
273-4]
Length = 327
Score = 42.5 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV------FLAMQQSYGAIAITS 56
++ TRP+++A +Q G + MP+ + + Y A+ I S
Sbjct: 27 VINTRPVERAAPLTRHLQAAGMSVIDMPMLTLQPRSTTDNDMILMRQWLAGEYQALVIVS 86
Query: 57 SESLSTLPANFCRHTPIFAIGEASACL 83
+ ++ A + A+
Sbjct: 87 PTAAASGLAIWQLLERERQANGATDKA 113
>gi|224142443|ref|XP_002324567.1| predicted protein [Populus trichocarpa]
gi|222866001|gb|EEF03132.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 31/273 (11%), Positives = 59/273 (21%), Gaps = 44/273 (16%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH-------DRESVFLAMQQSYGAIAIT 55
+ T P A R + + P+ P + AIA
Sbjct: 21 VAFTTPPNYATRLSHLLTLKSFTPLWCPTITTEPTQQTLSSLALHLSPHSLSLLSAIAFP 80
Query: 56 SSESLSTLP-----------ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
S +++ I A+G+ + T L
Sbjct: 81 SRTAITAFSTAALSLTTPLLPPREDTFIIAALGKDVELIDSTFLLTFCGDDISWVNVLVP 140
Query: 105 IIV------------EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQD 152
I + + P ++ L P F L +D Y ++
Sbjct: 141 TIATPSGLVQLLGTGRGRKVLCPVPRVVGLEEPPVVPDFLRELEGAGWVPIRVDAYETRW 200
Query: 153 IAYPETTMKNLLQNA---DAILFYARSSVLYFFSLPLPAKISA----------AFLCLSN 199
+ L DA++F + V
Sbjct: 201 LGPACGKGVVELSEGGLLDAMVFTSSGEVEGLLKSLREFGWDWEMVRRRWPHLVVAAHGP 260
Query: 200 NIASAIPASYKNVVTVACFPKE-TSLLKLLPLR 231
A+ V V+ ++ + +
Sbjct: 261 VTAAGAERLGVTVDVVSGRFDSFQGVVDAVEAK 293
>gi|56965173|ref|YP_176905.1| uroporphyrinogen-III synthase [Bacillus clausii KSM-K16]
gi|56911417|dbj|BAD65944.1| uroporphyrinogen-III synthase [Bacillus clausii KSM-K16]
Length = 268
Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 26/253 (10%), Positives = 60/253 (23%), Gaps = 30/253 (11%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPL--SYF---IHDRESVFLAMQQSYGAIAITS 56
++ +T +K + + K G + L + E++ + T+
Sbjct: 8 HVALT-ASRKTEEMEALLHKQGATSAVRSLQGTVIQDQETVTEAIISGLATQPDWFIFTT 66
Query: 57 SESLSTL----------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ TL A + A+++
Sbjct: 67 GIGVQTLLAFAEEAGVKEAFIKQVRSARIAVRGYKAKNALLKENITMDVVSEDGTTAQLV 126
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM----KN 162
+ K + + +I + E +L E K + Y +
Sbjct: 127 EQLKEIDWNGQKVIVQQYGLPSPTLEQFLKEGKAMVSAWLPYIHYAPKGETIDLFLEELL 186
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKISAAFL----------CLSNNIASAIPASYKNV 212
+ DA+ F F+ L + A A+
Sbjct: 187 EKKEYDAVCFTTALQAKALFARASETGRHEQLLHMFAGPTVACAVGKVTAEALSEEGVRR 246
Query: 213 VTVACFPKETSLL 225
V + +++
Sbjct: 247 VIYPKKERMGAMI 259
>gi|330948213|gb|EGH48473.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 98
Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 22/83 (26%), Gaps = 5/83 (6%)
Query: 137 EHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPL---PAKIS 191
+ + + Y + + + + + ++ + + L P
Sbjct: 1 ALGVGVDYLPLYRRYLPQHAPGALAQRVAVERLNGLVVSSGQGFEHLLQLAGDSWPDLAD 60
Query: 192 AAFLCLSNNIASAIPASYKNVVT 214
S +AS A+ V
Sbjct: 61 LPLFVPSPRVASIARAAGARTVI 83
>gi|218296883|ref|ZP_03497578.1| Uroporphyrinogen III synthase HEM4 [Thermus aquaticus Y51MC23]
gi|218242763|gb|EED09298.1| Uroporphyrinogen III synthase HEM4 [Thermus aquaticus Y51MC23]
Length = 253
Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 61/237 (25%), Gaps = 29/237 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----YGAIAITSSESLSTLPANFC 68
+ +++G+IP++ P+ + + T+ + L
Sbjct: 12 EEFKALAERLGFIPLLFPVQATEKVPVPEYEDRLRELDRGVDLFLATTGVGIKDLLRAAQ 71
Query: 69 ----------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
A G +A R+ G T G S +L ++ +
Sbjct: 72 DLGLDLKKPLEKAFRLARGAKAARALREIGLTPHAVGDGTSQSLLPLLPQ------GSGV 125
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARS 176
E L + + Y ++ + DA+ F A
Sbjct: 126 AALQLYGKPLPLLEGALRARGYRVLPLLPYRHLPDPEGILRLEEAVLGGEVDALAFVAAI 185
Query: 177 SVLYFFS-------LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
V + F L L + A A+ V + SLL+
Sbjct: 186 QVEFLFEGAKDPKALAEALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQ 242
>gi|167585807|ref|ZP_02378195.1| hypothetical protein BuboB_10753 [Burkholderia ubonensis Bu]
Length = 509
Score = 42.5 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 12/120 (10%), Positives = 29/120 (24%), Gaps = 13/120 (10%)
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ----NADAILFYAR 175
+ + G D L + + ++ Y + + A L +
Sbjct: 1 MIVRGDGGREWLADRLRDAGADVHLVAAYRRVVPEPRIGAWERVHALLGGEPHAWLVTSS 60
Query: 176 SSVLYFFSLPLPAKISA--------AFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
V L A + I A + +T+ + +++
Sbjct: 61 EGVRNLHELAQAHLTEAEIDALKHAPLVTPHPRIEQTARALGFDRITLT-GAGDERIVRA 119
>gi|148544902|ref|YP_001272272.1| hypothetical protein Lreu_1696 [Lactobacillus reuteri DSM 20016]
gi|184154239|ref|YP_001842580.1| putative type I site-specific deoxyribonuclease [Lactobacillus
reuteri JCM 1112]
gi|227364042|ref|ZP_03848142.1| conserved hypothetical protein [Lactobacillus reuteri MM2-3]
gi|325683247|ref|ZP_08162763.1| hypothetical protein HMPREF0536_11685 [Lactobacillus reuteri
MM4-1A]
gi|60172709|gb|AAX14543.1| hypothetical protein [Lactobacillus reuteri]
gi|148531936|gb|ABQ83935.1| hypothetical protein Lreu_1696 [Lactobacillus reuteri DSM 20016]
gi|183225583|dbj|BAG26100.1| putative type I site-specific deoxyribonuclease [Lactobacillus
reuteri JCM 1112]
gi|227070964|gb|EEI09287.1| conserved hypothetical protein [Lactobacillus reuteri MM2-3]
gi|324977597|gb|EGC14548.1| hypothetical protein HMPREF0536_11685 [Lactobacillus reuteri
MM4-1A]
Length = 236
Score = 42.1 bits (97), Expect = 0.055, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 1/113 (0%)
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ K + + +E K + + + + K +LQN+ A+ +
Sbjct: 3 ILITYPKNKVPVYWRIKLEQKDDVIYFPFRILKAVNLTQED-KEILQNSKALTITSLFGA 61
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
F + +A LS I + N + VA SLL+ L +
Sbjct: 62 QVFCNQLKKLNSTATIYVLSKKIQQNLENKVSNPIQVAPSENRKSLLEELKNK 114
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 59/222 (26%), Gaps = 16/222 (7%)
Query: 1 MYIVITRPIKKAL-RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAM-QQSYGAIAITSSE 58
M I+IT P K + K+++ + P + Q+ A+ ITS
Sbjct: 1 MAILITYPKNKVPVYWRIKLEQKD-DVIYFPFRILKAVNLTQEDKEILQNSKALTITSLF 59
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
+ I S + + + K ++E+
Sbjct: 60 GAQVFCNQLKKLNSTATIYVLSKKIQQNLENKVSNPIQVAPSENRKSLLEELKNKHVTDV 119
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAI--LFYARS 176
+G K ++ + Y + I Y + E + L + S
Sbjct: 120 CWLIGDKAEKYYSDFYGRK-------IVIYKNTWDKQHEGKALKIFMKQHITSALVTSIS 172
Query: 177 SVLYFFSLP----LPAKISAAFLCLSNNIASAIPASYKNVVT 214
+ F + + L N + I V+
Sbjct: 173 NFNRMFGVMTRVDSNEYRDINYYVLGENTGNYIQEKGLKVIY 214
>gi|311070983|ref|YP_003975906.1| uroporphyrin-III C-methyltransferase [Bacillus atrophaeus 1942]
gi|310871500|gb|ADP34975.1| uroporphyrin-III C-methyltransferase [Bacillus atrophaeus 1942]
Length = 493
Score = 42.1 bits (97), Expect = 0.055, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 54/219 (24%), Gaps = 6/219 (2%)
Query: 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDR-ESVFLAMQQSYGAIAITSSESLSTLPANFC 68
++ +++++ G + P + L +S+ I TS ++
Sbjct: 263 EEESPIAKELRENGADVIEWPKWNVQKTPIDENILNRLESFEDILFTSRRAVCEFFRMLA 322
Query: 69 RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
++ + + + +L +K + +
Sbjct: 323 SKKMDIRQLRGRLSADSLSAKAELEKRGFDIASNIQY--NGALLIIGEKQTVQERFHHLD 380
Query: 129 FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA 188
+ + ET ++ +L + LP +
Sbjct: 381 LCSSYDVFITHENVIDDRFTSIFKRTIDETPLQLILCENKKCMEQLIREKGRIGVLPEQS 440
Query: 189 KISAAFLCLSNNIASAIPASYKNVV-TVACFPKETSLLK 226
K +CLS V V TSL+
Sbjct: 441 KEPILVVCLSEEAEETARQYGFPDVHRV--KADGTSLID 477
>gi|285019843|ref|YP_003377554.1| uroporphyrinogen-III synthase [Xanthomonas albilineans GPE PC73]
gi|283475061|emb|CBA17560.1| putative uroporphyrinogen-III synthase protein [Xanthomonas
albilineans]
Length = 266
Score = 42.1 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 22/187 (11%), Positives = 51/187 (27%), Gaps = 12/187 (6%)
Query: 42 FLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIG----EASACLARQKGFTQIFHGKD 97
LA + + +S ++ A + +A + G ++
Sbjct: 64 ALAQALAAPRVIFSSPAAVRAAAALQPLVSRADQCWLAVGTGTARALNRHGIAEVTVPTR 123
Query: 98 NSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ + + + P + GG+ L PL D Y +
Sbjct: 124 MDSDGLLALPQLAAVAAPVGWVTAPGGRGMI---AAQLQARGTPLLRADVYERVPLPLRP 180
Query: 158 TTMKNLLQNADAIL-FYARSSVLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNV 212
+ L A +L + ++ + ++A + S +A+
Sbjct: 181 QRIAQLRTVAPGVLALSSGEALQLIVAQLPDDLLAAWRAQPLVAASPRLAALATELGFTD 240
Query: 213 VTVACFP 219
+ A P
Sbjct: 241 IAHAAGP 247
>gi|327403450|ref|YP_004344288.1| Uroporphyrinogen III synthase HEM4 [Fluviicola taffensis DSM 16823]
gi|327318958|gb|AEA43450.1| Uroporphyrinogen III synthase HEM4 [Fluviicola taffensis DSM 16823]
Length = 221
Score = 42.1 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 57/202 (28%), Gaps = 19/202 (9%)
Query: 31 LSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPA---NFCRHTPIFAIGEASACLARQK 87
L F ++ + + +S S + + I IG + +
Sbjct: 32 LISFKAID----FSLPSEWDVVFFSSPRSFDFFCKRGLHLEENQQIACIGNETKNQIEKA 87
Query: 88 GFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDC 147
GF+ F G++ I K + ++ + I + + +
Sbjct: 88 GFSVSFVGQEAGKPSEVGIA---FKEWLGKRIALFPQSNKSNKSVEKSISESLRI-PLLV 143
Query: 148 YYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPA 207
Y + + + +F + S++ F L +A + + +
Sbjct: 144 YETVNSSSKIDW-------CSVYIFTSPSNLTSFL-LENKIPKNAIIIAWGETTNELMLS 195
Query: 208 SYKNVVTVACFPKETSLLKLLP 229
V L+++LP
Sbjct: 196 LGYQSTLVLNTSSYHELIEILP 217
>gi|320450251|ref|YP_004202347.1| uroporphyrinogen-III synthase [Thermus scotoductus SA-01]
gi|320150420|gb|ADW21798.1| uroporphyrinogen-III synthase [Thermus scotoductus SA-01]
Length = 254
Score = 42.1 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 25/235 (10%), Positives = 58/235 (24%), Gaps = 25/235 (10%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----YGAIAITSSESLSTLPANFC 68
+ K+G IP+++P+ + + T+ + L
Sbjct: 14 EEFKSLATKLGLIPLLLPVQATEKVPVPEYQDHLRRLGEGVDLFVATTGIGVRELMEGGR 73
Query: 69 --------RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
+ + + HG + + + + +
Sbjct: 74 VLELDLKGSLEKALRLARGTKAARVLRDLGLAPHGVGDGTTPSLLPLLPQG----PGVAA 129
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL--QNADAILFYARSSV 178
E L E + + Y ++ + + +A+ F A V
Sbjct: 130 LQLYGKPLPLLEQALEERGYAVLPLMPYRHLPDPEGIRLLEETILAKEVEAVAFVAAIQV 189
Query: 179 LYFFS-------LPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ F L + L + A A+ V + S+L+
Sbjct: 190 EFLFEGARNPSDLRKTFQHEVKALAVGRVTADALREWGVQPFYVDEQERLGSMLQ 244
>gi|297180019|gb|ADI16244.1| hypothetical protein [uncultured bacterium HF0010_16H03]
Length = 239
Score = 41.7 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 82/246 (33%), Gaps = 33/246 (13%)
Query: 1 MYIVITRPIKKALRTQEK--IQKMGYIPVMMPLSYFIHDR-------ESVFLAMQQSYGA 51
M +V TRP + + E ++K+ + + I + +Y
Sbjct: 1 MILVNTRPKDLSEKINELCSLEKIELKNIHLS--EIIPIKIDTDNGIHKKIFENFNTYTN 58
Query: 52 IAITSSESLSTLPANF-------CRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
TS ++ ++ FA+G+++ KGF I +S L +
Sbjct: 59 FIFTSRAAVENGTEFIKIKSELLNKNHRFFAVGDSTKEALAMKGFKAIMPIIKSSDGLVE 118
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
+I + + + G+ N + ++ L E +R ++ Y + ++
Sbjct: 119 MI-----KNSFPGQNLIICGENTNMNLQNKLAESADEIRCY------NLNYSMEFISDIS 167
Query: 165 QNADAILFYARSSVLYFFSLPL-PAKISAAFLCLSNNIASAIPAS--YKN-VVTVACFPK 220
IL Y + + + + F+ S I S I + + V+
Sbjct: 168 SLEAIILIYNYLTFEFIYKNLNVNMLRNKIFIVASERIKSKIFNLVPGLDLKILVSKSSL 227
Query: 221 ETSLLK 226
+ +L+
Sbjct: 228 DEDMLE 233
>gi|323331583|gb|EGA72998.1| Hem4p [Saccharomyces cerevisiae AWRI796]
Length = 246
Score = 41.7 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 33/220 (15%)
Query: 18 KIQKMGYIPVMMPLSYFIHDRES------VFLAMQQSYGAIAITSSESLSTLPANFCRH- 70
+ + + P+ +PL H + + I ITS ++ +L
Sbjct: 25 ECRSKAFEPIFVPLIKHTHVIQDFRNVLNTIPNYLNTINYIIITSQRTVESLNEAIIPTL 84
Query: 71 ----------TPIFAIGEASACLARQKGFTQIFHGKD--NSINLAKIIVEQ---KVLFTP 115
++ +G A+A R+ GF + G+D N LA II++ + P
Sbjct: 85 TSEQKAALLSKTVYTVGPATANFIRRSGFINVKGGEDAGNGSILADIIIDDLCTDIKACP 144
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNA-------D 168
L++L G+ R L I +R + Y +++++ + ++ D
Sbjct: 145 PSELLFLVGEIRRDIIPKKLHSKGIKVREVVTYKTEELSDGFKRFIHAMKECDEDEVFSD 204
Query: 169 AILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASA 204
++ ++ + +
Sbjct: 205 WVVVFSPQGTKEITQYLGDSNRLPGSHLRVASIGPTTKKI 244
>gi|317126985|ref|YP_004093267.1| uroporphyrin-III C-methyltransferase [Bacillus cellulosilyticus DSM
2522]
gi|315471933|gb|ADU28536.1| uroporphyrin-III C-methyltransferase [Bacillus cellulosilyticus DSM
2522]
Length = 474
Score = 41.7 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 21/216 (9%), Positives = 55/216 (25%), Gaps = 17/216 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDR-ESVFLAMQQSYGAIAITSSESL 60
+++ + + ++ G P + L I T+ ES+
Sbjct: 257 RVLVAKSSGTSFDLEDYFTGHGAEAYSFPTVKMEEAAFTNGELTKALQSDRIIFTAPESV 316
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
T ++ H+ F + L + + +K
Sbjct: 317 DTFLSSMLNHSFDIRDLPR----------DIQFLSEKTRKKLMEKGIIATKAEFSEKTTA 366
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
+ + ++ H + + E + N ++F ++S+
Sbjct: 367 VISPSGKKIDQSLFVDSHVFRSHAWE-RDHRFDELNERILTE--DNWQTVIFPNKASIDS 423
Query: 181 FFSLPLPAKISAAFLC---LSNNIASAIPASYKNVV 213
F + +I L + ++ V
Sbjct: 424 FIAEIERLRIELKALSFAYIGESVKKYAIQCGFTHV 459
>gi|325919940|ref|ZP_08181925.1| uroporphyrinogen-III synthase [Xanthomonas gardneri ATCC 19865]
gi|325549556|gb|EGD20425.1| uroporphyrinogen-III synthase [Xanthomonas gardneri ATCC 19865]
Length = 258
Score = 41.7 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 23/231 (9%), Positives = 54/231 (23%), Gaps = 16/231 (6%)
Query: 7 RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSESLSTL 63
RP + + + G + + + L TS ++
Sbjct: 17 RPSGEHAPLRRAAARHGGRLLALSPWRLQTNDTPQARAALEQALQAPIAVFTSPAAVHAA 76
Query: 64 PANFCRHTPIFAIG----EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
P A E +A + G + + ++ + P + +
Sbjct: 77 QRLSPLRRPAQAQWVSVGEGTARALQAYGIDAVVRPARMDS---EGLLALPLFEPPLQTV 133
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAY--PETTMKNLLQNADAILFYARSS 177
+ L + + D Y + + + +
Sbjct: 134 ALITAPGGRGMLAPALEQRGAHVLRADVYQRVALRLRASAVHALASALPRSVLALSSAEA 193
Query: 178 VLYFFSLPLPAKISA----AFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ A + A + S + ++ A+ V A P L
Sbjct: 194 LSLVLEQLPAALVDAWQLHPVVASSERMRASAHAAGFTHVVRAAGPLPEQL 244
Score = 34.8 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 26/123 (21%), Gaps = 1/123 (0%)
Query: 106 IVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ 165
+ + L + +
Sbjct: 1 MTRPTSSTDAWTLISLRPSGEHAPLRRAAARHGGRLLALSPWRLQTNDTPQARAALEQAL 60
Query: 166 NADAILFYARSSVLYFFSLPL-PAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
A +F + ++V L A ++ + A A+ A + V L
Sbjct: 61 QAPIAVFTSPAAVHAAQRLSPLRRPAQAQWVSVGEGTARALQAYGIDAVVRPARMDSEGL 120
Query: 225 LKL 227
L L
Sbjct: 121 LAL 123
>gi|39961839|ref|XP_364722.1| hypothetical protein MGG_09567 [Magnaporthe oryzae 70-15]
gi|145011071|gb|EDJ95727.1| hypothetical protein MGG_09567 [Magnaporthe oryzae 70-15]
Length = 308
Score = 41.7 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 22/263 (8%), Positives = 61/263 (23%), Gaps = 62/263 (23%)
Query: 24 YIPVMMPLSYFIHDRESVFLAMQ------------QSYGAIAITSSESLSTL-------- 63
+ P+ +P+ + YG + TS ++
Sbjct: 34 FEPIFIPVLEHRFLDNGMKQVRAVLKEHKIGNGADCQYGGMIFTSQRAVEAFAHLVTEGA 93
Query: 64 -----PANFCRHTPIFAIGEASACL----ARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ PI+++G A+ ++ N LA I++ +
Sbjct: 94 GNGGAQWPNLQDIPIYSVGPATTRALKAIPQEPALNVYGEHAGNGETLAPFILDHYGEWY 153
Query: 115 PQKPLIYLGGKPRNFHFEDYLIE----------HKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ D + + +I + + Y + + E M+ L
Sbjct: 154 KERDTKPPLLFLTGEVRRDIIPKVLMDSRLAATRRIQVDEVVVYGTGVMHSFEDEMRQTL 213
Query: 165 -----QNADAILFYARSSVLYFFSLP-----------------LPAKISAAFLCLSNNIA 202
+ ++ + + +
Sbjct: 214 DRVRGYRMLWAVVFSPTGCDSMLRALGFLKGDGKLETEVVGRRKDSDHRTLVATIGPTTR 273
Query: 203 SAIPASY-KNVVTVACFPKETSL 224
+ + S+ + P +
Sbjct: 274 AHLADSFQFEPDVCSEHPSPDGV 296
>gi|93004930|ref|YP_579367.1| putative uroporphyrinogen-III synthase [Psychrobacter
cryohalolentis K5]
gi|92392608|gb|ABE73883.1| putative uroporphyrinogen-III synthase [Psychrobacter
cryohalolentis K5]
Length = 325
Score = 41.7 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH---DRESVFLAM---QQSYGAIAITS 56
++ TRP+++A +Q G V MP+ + L Y A+ I S
Sbjct: 25 VINTRPVERAAPLTRHLQAAGMSVVDMPMLTLQPRLTTDSDMILMRQWLAGEYQALVIVS 84
Query: 57 SESLSTLPANFCRHTPIFAIGEASACL 83
+ ++ A + A+
Sbjct: 85 PTAAASGLAIWQLLEREHQANGATDKA 111
>gi|327311854|ref|YP_004338751.1| Uroporphyrinogen III synthase HEM4 [Thermoproteus uzoniensis
768-20]
gi|326948333|gb|AEA13439.1| Uroporphyrinogen III synthase HEM4 [Thermoproteus uzoniensis
768-20]
Length = 208
Score = 41.7 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 13/177 (7%), Positives = 36/177 (20%), Gaps = 16/177 (9%)
Query: 48 SYGAIAITSSESLSTLPANFCR-HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ + S + R + A + L K +
Sbjct: 35 DGDYLVVMSPAVARAVDIKAVRERFKCVICVGPTTASAVGGCLVPREYSSYGVARLIKEM 94
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
++ L N L + + Y ++
Sbjct: 95 AP--------GRVVVLRSSAGNDILRRLLPDA----VEVPVYDISIDKDKLREAAEMVAR 142
Query: 167 ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ ++ + + L + + ++ + + V VA
Sbjct: 143 SSVVVLTSATVADKIAPLV--DLRGKKVVAIGPVTSARLASLGIPHV-VAAESTIEG 196
>gi|227545404|ref|ZP_03975453.1| uroporphyrinogen-III synthase [Lactobacillus reuteri CF48-3A]
gi|300908516|ref|ZP_07125979.1| uroporphyrinogen-III synthase [Lactobacillus reuteri SD2112]
gi|112944522|gb|ABI26356.1| uroporphyrinogen-III synthase [Lactobacillus reuteri]
gi|227184686|gb|EEI64757.1| uroporphyrinogen-III synthase [Lactobacillus reuteri CF48-3A]
gi|300893923|gb|EFK87281.1| uroporphyrinogen-III synthase [Lactobacillus reuteri SD2112]
Length = 236
Score = 41.7 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 1/113 (0%)
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
++ K + + +E + + + + ++ + + ++ +
Sbjct: 3 ILITYPKHKIPIYWRMRLEQQEDVIYFPFRVLKPVKLSREEIQQVK-KSATLVITSLYGA 61
Query: 179 LYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
F +A LS+ I + KN + VA +LLK L +
Sbjct: 62 KVFIEELSKLNKAATIYVLSDKIKKVLQEKIKNPIKVAESENRNALLKDLEQQ 114
>gi|255320959|ref|ZP_05362132.1| uroporphyrinogen-III synthase [Acinetobacter radioresistens SK82]
gi|262379949|ref|ZP_06073104.1| uroporphyrinogen-III synthase [Acinetobacter radioresistens SH164]
gi|255301923|gb|EET81167.1| uroporphyrinogen-III synthase [Acinetobacter radioresistens SK82]
gi|262298143|gb|EEY86057.1| uroporphyrinogen-III synthase [Acinetobacter radioresistens SH164]
Length = 260
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 21/221 (9%), Positives = 50/221 (22%), Gaps = 22/221 (9%)
Query: 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQS----YGAIAITS 56
M + TRP +++ + + G+ + +PL S+ L I + S
Sbjct: 1 MLFINTRPQERSQALSLALLQAGHQVLELPLLELTPTAYSLQLQQLYQNLPFCQVIVVVS 60
Query: 57 SESLSTLPANFCR--------HTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVE 108
+ + + + + K + +
Sbjct: 61 PAAADVGMQYLQQSGISLNDLRQLQWIAVGQTTAEHLKHYSISSQVPKLETSEGMLELDV 120
Query: 109 QKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN------ 162
+ + + G+ L + I + Y
Sbjct: 121 FRQFNDLH-SVAFWRGEGGRQFMMQNLHQQGIKVLNFILYERSCPTQSIHDFSKVAAQII 179
Query: 163 LLQNADAILFYARSSVLYFFSLPLPA---KISAAFLCLSNN 200
N + + +S + L +L L
Sbjct: 180 QYGNQVLVPITSEASWSNWLDLCQNQQSVLQLCHYLVLGER 220
>gi|298674484|ref|YP_003726234.1| oxaloacetate decarboxylase alpha subunit [Methanohalobium
evestigatum Z-7303]
gi|298287472|gb|ADI73438.1| oxaloacetate decarboxylase alpha subunit [Methanohalobium
evestigatum Z-7303]
Length = 579
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 24/259 (9%), Positives = 60/259 (23%), Gaps = 40/259 (15%)
Query: 1 MYIVIT----RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITS 56
M + +T R ++L +++ + + + V + +G S
Sbjct: 1 MRVKLTDTILRDAHQSL-LATRMRTRN-------MLPIVDKLDEVGYHSLEMWGGATFDS 52
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV--EQKVLFT 114
+ L + + + + ++ + V +
Sbjct: 53 --CIRYLNEDPWERLRELKKHMHNTQAQMLLRGQNLVGYRHYPDDVVEKFVTKAYENGID 110
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI----------AYPETTMKNLL 164
+ + + + ++ CY + E + L
Sbjct: 111 IFRIFDAVNDVRNMETAINTANKLGAHVQGTICYTISPVHTTEKYVELAKELEQRECDSL 170
Query: 165 QNADAILFYARSSVLYFFSLPLPA---KISAAFLCLS---NNIASAIPASYKNVVTVA-- 216
D + + IS C S A + +V+ A
Sbjct: 171 CIKDMAGLLSPHAAEELIKSIKKKVSLPISLHCHCTSGMAPMTYMAACEAGVDVLDTALS 230
Query: 217 ------CFPKETSLLKLLP 229
P S++ L
Sbjct: 231 PFSGGSSQPPTESMVAALQ 249
>gi|254447107|ref|ZP_05060574.1| uroporphyrinogen-III synthase [gamma proteobacterium HTCC5015]
gi|198263246|gb|EDY87524.1| uroporphyrinogen-III synthase [gamma proteobacterium HTCC5015]
Length = 273
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 65/249 (26%), Gaps = 35/249 (14%)
Query: 2 YIVI--TRPIKKALRTQEKIQKMGYIPVMMPLSYF------IHDRESVFLAMQQSYGAIA 53
+ + TR + ++ G PL + ++Q +
Sbjct: 9 RVALPETR---QLDALARLLEHRGADVQRCPLVSIHDSPEREKVEAWLDRFIEQPPSVLV 65
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
I + E + L R + A +A + + + ++ ++
Sbjct: 66 ILTGEGIRRLTGFAERSGRLAAWQQALGQTLKLARGPKPGKALRELGLRSDVLADRPTTE 125
Query: 114 TPQKPLI-----------YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKN 162
+ L L G N YL E + + + Y E +
Sbjct: 126 GVIETLKQHSLKGQRVGVQLYGTNPNTPLMAYLAEREAEVDTVAPYVYASELESEAVEQL 185
Query: 163 LLQ----NADAILFYARSSVLYFFSLPLPAKI---------SAAFLCLSNNIASAIPASY 209
+L D + F ++ + + + + A + +A + A
Sbjct: 186 ILDLASGEYDLLCFTSQPQLKRLHQVAHKSGLEAELAAGLKETALAAIGPVMAGVLNAEG 245
Query: 210 KNVVTVACF 218
+V
Sbjct: 246 YSVAVQPQK 254
>gi|307108264|gb|EFN56504.1| hypothetical protein CHLNCDRAFT_144105 [Chlorella variabilis]
Length = 172
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 7/45 (15%), Positives = 16/45 (35%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ 47
+V+TR K + + ++ G +P+ + L
Sbjct: 47 VVLTRAQGKNGKLRRVLEGRGIACFELPMLETAAGPDRDRLPKAN 91
>gi|1033197|gb|AAC43974.1| uroporphyrinogen III synthase [Chlorobium vibrioforme f.
thiosulfatophilum]
Length = 60
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Query: 176 SSVLYFFSLPLPAKIS--AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
S+ FF ++S + + A+ V + + S K +
Sbjct: 1 STAKNFFEAIGSKELSDSVQIAAIGTTTSGALEKMGIKVDIIPEYFDGPSFAKAIA 56
>gi|94266662|ref|ZP_01290339.1| probable uroporphyrinogen III synthase/methyltransferase
(HemD+CobA) [delta proteobacterium MLMS-1]
gi|93452709|gb|EAT03260.1| probable uroporphyrinogen III synthase/methyltransferase
(HemD+CobA) [delta proteobacterium MLMS-1]
Length = 48
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 3/37 (8%), Positives = 10/37 (27%)
Query: 192 AAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLL 228
+ A+ + V +L++ +
Sbjct: 3 VKIAAIGPITAATAHEAGLVVDIQPTEHTIAALVEAI 39
>gi|296537110|ref|ZP_06899070.1| possible uroporphyrinogen III synthase HEM4 [Roseomonas cervicalis
ATCC 49957]
gi|296262563|gb|EFH09228.1| possible uroporphyrinogen III synthase HEM4 [Roseomonas cervicalis
ATCC 49957]
Length = 153
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 31/115 (26%), Gaps = 7/115 (6%)
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE--TTMKNLLQNADAI 170
PL G+ + + L H +R Y ++ A
Sbjct: 8 DPKGAPLCLAAGEGYSMALAEALRGHGFAVRRRVVYAARPATALPVAAMRALERGEIRAA 67
Query: 171 LFYARSSVLYFFSLPLPAKI-----SAAFLCLSNNIASAIPASYKNVVTVACFPK 220
LF + S L + + A L LS IA A+ + P
Sbjct: 68 LFLSPRSAHVTQRLLRGSGLAETVRRVAALALSPRIAGALAGMPWQAIRATPVPD 122
>gi|167949217|ref|ZP_02536291.1| hypothetical protein Epers_23046 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 83
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 167 ADAILFYARSSVLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKET 222
+ + + + + PA ++ L +S + + +A E
Sbjct: 1 MQLVTATSNAVLENLLQMLGPAAQPMLLATPLLVISRRMRERAQQLGFRRILLAQGADEQ 60
Query: 223 SLLKLL 228
S+++ L
Sbjct: 61 SIMERL 66
>gi|296242206|ref|YP_003649693.1| dual specificity protein phosphatase [Thermosphaera aggregans DSM
11486]
gi|296094790|gb|ADG90741.1| dual specificity protein phosphatase [Thermosphaera aggregans DSM
11486]
Length = 301
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Query: 3 IVITRPIKK--ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESL 60
IV+T P ++ + E ++ G+ + +P F L S L
Sbjct: 32 IVLTMPHEQPLNEKYIEILESHGFQVLHVPTLDFHPLELFDLLKTSIFIDENLERSHRVL 91
Query: 61 STLPANFCRHTPIFAIG 77
R + A
Sbjct: 92 VHCMGGIGRSGLVTAAY 108
>gi|255027968|ref|ZP_05299954.1| uroporphyrinogen-III methyltransferase/uroporphyrinogen-III
synthase [Listeria monocytogenes FSL J2-003]
Length = 53
Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 6/39 (15%), Positives = 15/39 (38%)
Query: 194 FLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
L + ++ + + N A SL++L+ +
Sbjct: 9 ILSIGRFTSATLASFGINHFIEAESATPESLIELIQKTK 47
>gi|307717022|gb|ADN88564.1| uroporphyrinogen-III synthase [Listeria ivanovii subsp. ivanovii]
gi|307717024|gb|ADN88565.1| uroporphyrinogen-III synthase [Listeria ivanovii subsp. ivanovii]
gi|307717108|gb|ADN88607.1| uroporphyrinogen-III synthase [Listeria ivanovii subsp. ivanovii]
gi|307717112|gb|ADN88609.1| uroporphyrinogen-III synthase [Listeria ivanovii subsp. ivanovii]
gi|307717118|gb|ADN88612.1| uroporphyrinogen-III synthase [Listeria ivanovii subsp. ivanovii]
Length = 165
Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 46/161 (28%), Gaps = 7/161 (4%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLP--ANFCRHTPIFAIGEASACLARQKGF 89
S + I TS+ +++ N + IGE + + GF
Sbjct: 1 IETRPKNVSFTSIQLE-AEWIFFTSANAVTYFFARQNVIQPYKYAVIGEQTREKLAEYGF 59
Query: 90 TQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYY 149
+ F + E + + ++ E+ L E + ++ Y
Sbjct: 60 SPSFIPSVY--QTEIFLTEWLNQYPEKTSILLPKSNLSRTVIEETLNEKGYFVFPVELYE 117
Query: 150 SQDIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPA 188
+ + + I+F + S+ F ++
Sbjct: 118 TIVPTASRLELITIFARDEKQIIIFASPSAWKSFNAVAKNF 158
>gi|317498180|ref|ZP_07956481.1| hypothetical protein HMPREF0996_01462 [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894535|gb|EFV16716.1| hypothetical protein HMPREF0996_01462 [Lachnospiraceae bacterium
5_1_63FAA]
Length = 88
Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 7/66 (10%), Positives = 19/66 (28%), Gaps = 4/66 (6%)
Query: 164 LQNADAILFYARSSVLYFFSLPLPAK----ISAAFLCLSNNIASAIPASYKNVVTVACFP 219
+++ ++ F SS FF K + + + + + +
Sbjct: 15 MKDIRSVSFTCASSARRFFDQIGEEKQQWIENIPCISIGEKTTKQLREIGVRHILESKDT 74
Query: 220 KETSLL 225
S+
Sbjct: 75 TYVSMF 80
>gi|325127892|gb|EGC50796.1| uroporphyrinogen-III synthase [Neisseria meningitidis N1568]
Length = 184
Score = 40.2 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 44/155 (28%), Gaps = 8/155 (5%)
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
A+G+ S + + D + + A + + ++++ G R
Sbjct: 14 HIAVGQGSRRALERCLGRTVIAPDDGNDSEAVLRLPVWNSLPEGARVLFVRGHGRRDFLM 73
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLP----A 188
+ L E V + Y+ + + +N A + V F P
Sbjct: 74 NALQEKGFRTEVAEVYFRRHKPLNFQNFQT--ENIAAAYITSTELVRLLFGQLPPQFSRF 131
Query: 189 KISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
S + IA A+ V P +
Sbjct: 132 FKSLLYFTHHPRIAEALKREGVCSVET--VPTLEA 164
>gi|188989615|ref|YP_001901625.1| uroporphyrinogen-III synthase [Xanthomonas campestris pv.
campestris str. B100]
gi|167731375|emb|CAP49550.1| hemD [Xanthomonas campestris pv. campestris]
Length = 266
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 22/233 (9%), Positives = 56/233 (24%), Gaps = 26/233 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH--------DRESVFLAMQQSYGAIAI 54
++ RP + + + + G L + L +
Sbjct: 21 LLSLRPSGEHAPLRRAVARHGGQ-----LLAVSPWRLQINDTLQARDALRHALGAPIVVF 75
Query: 55 TSSESLSTLPANFCRHTPIFAIG----EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
TS ++ P A E +A + G + + ++
Sbjct: 76 TSPAAVHAAHRLLPLQRPGPAQWASVGEGTARALQACGIDAVVRPARMDS---EGLLALP 132
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPET--TMKNLLQNAD 168
P + + L + + D Y + + +
Sbjct: 133 AFNPPLHAVGLVTAPGGRGMLAPALEQRGARILRADVYQRVALRLRASTVHVLETALPRS 192
Query: 169 AILFYARSSVLYFFSLPLPAK---ISAA-FLCLSNNIASAIPASYKNVVTVAC 217
+ + +++ P+ + + S+ + A A+ V A
Sbjct: 193 VMALSSSEALMLIVQQLPPSLATALKTRPVVASSDRMLEAARAAGFMQVHRAE 245
>gi|291482719|dbj|BAI83794.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
natto BEST195]
Length = 481
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 18/206 (8%), Positives = 47/206 (22%), Gaps = 11/206 (5%)
Query: 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESLSTLPANFC 68
+ +K++ G + P + + L + + TS + C
Sbjct: 263 EDEDPLADKLRDSGADVIEWPKWRTENMPVNEEILRKIGIFEDVFFTSRRVV-------C 315
Query: 69 RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
A + K K ++ + +
Sbjct: 316 EFFRALASQKIDIRQLTAKLSAASEQAKTELEKRGFLVTATQPDSEKCLVVGSRHAVEFM 375
Query: 129 FHFEDY-LIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLP 187
E + + E+ + ++ + + P P
Sbjct: 376 QKHESCSFYITHENVIDDRFTHMIQRTISESPLHMVICPNKLSVQQLINGGEQIGISPEP 435
Query: 188 AKISAAFLCLSNNIASAIPASYKNVV 213
+ +C+ ++ SA A +
Sbjct: 436 SASRPPIVCIGDD--SAAGAYGFTAI 459
>gi|317498181|ref|ZP_07956482.1| uroporphyrin-III C-methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894536|gb|EFV16717.1| uroporphyrin-III C-methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 296
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 5/64 (7%), Positives = 19/64 (29%)
Query: 4 VITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTL 63
++T+ + + + ++ GY + + + + + TS +
Sbjct: 216 LVTKIGDQPSKLAQILKDHGYKVKELQTGEISYRYDWISKEELAKVTYLIFTSRYGVHGF 275
Query: 64 PANF 67
Sbjct: 276 MKQM 279
>gi|297180919|gb|ADI17123.1| hypothetical protein [uncultured gamma proteobacterium
HF0070_03O15]
gi|297181505|gb|ADI17692.1| hypothetical protein [uncultured gamma proteobacterium
HF0130_23I23]
Length = 221
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 165 QNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
N I+F + +V +F L + ++ + + + P L
Sbjct: 38 NNFSEIIFQSSPAVDFFKDL--SFLTDKQIYSMGKATSATLESKGLSS-LNPQSPSSEGL 94
Query: 225 LKLLPLRR 232
++LL R
Sbjct: 95 IELLEKSR 102
>gi|224373010|ref|YP_002607382.1| uroporphyrinogen-III synthase [Nautilia profundicola AmH]
gi|223589318|gb|ACM93054.1| uroporphyrinogen-III synthase [Nautilia profundicola AmH]
Length = 212
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Query: 140 IPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSN 199
+ ++ Y I + + +N D ++F +++ V + + L +
Sbjct: 13 QKIDGVENYPVIKINFLSPSF--SFENIDYLIFTSKNGVRA-VNNLTDEWKNYPSLAIGK 69
Query: 200 NIASAIPASYKNVVTVACFP 219
A+ I V +A
Sbjct: 70 ATANEIEKLGGKVEYIAKSA 89
>gi|330835712|ref|YP_004410440.1| uroporphyrinogen III synthase HEM4 [Metallosphaera cuprina Ar-4]
gi|329567851|gb|AEB95956.1| uroporphyrinogen III synthase HEM4 [Metallosphaera cuprina Ar-4]
Length = 219
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 60/212 (28%), Gaps = 26/212 (12%)
Query: 1 MYIVITRPI----KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITS 56
M ++ RP + + +PL S A+ TS
Sbjct: 1 MRVLYLRPEGSEVPQLD---------NVDVLNVPLFSPKCIDYSFK----SETEAVGFTS 47
Query: 57 SESLSTLPAN-FCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
S+ +F+IG +A + G + K S +LA++++E++V
Sbjct: 48 VNSVRCFKDFDKISDLKVFSIGPVTAEELLKHGIRSEYPSKYTSKDLARLVLERQVRHFT 107
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ K + + + D ++ + + ++ +
Sbjct: 108 ----SFRSAKASSEMKGILNLISYQEIFNYDLVLNEAKVQDAKKILEE-CSVQMVVLTSS 162
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPA 207
+ + + ++ + +
Sbjct: 163 LIAKTVANFLRDC---YKVISIGPMTSTTLRS 191
>gi|307717114|gb|ADN88610.1| uroporphyrinogen-III synthase [Listeria ivanovii subsp.
londoniensis]
gi|307717116|gb|ADN88611.1| uroporphyrinogen-III synthase [Listeria ivanovii subsp.
londoniensis]
Length = 165
Score = 39.8 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 15/159 (9%), Positives = 42/159 (26%), Gaps = 3/159 (1%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
S + I TS+ +++ A P + +
Sbjct: 1 IETRPRNISFTSMQLE-AEWIFFTSANAVTYFFARQNVIQPYKYAVIGEQTSEKLAEYGF 59
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
++ + E + + ++ E+ L E + ++ Y +
Sbjct: 60 SPSFIPSAYQTEIFLAEWLNRYPEKTSVLLPKSNLSRTIIEETLNEKGYFVFPVELYETI 119
Query: 152 DIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPA 188
+ + I+F + S+ F+++
Sbjct: 120 VPTASRLELITIFARDEKQIIIFASPSAWKSFYAVAKNF 158
>gi|226356819|ref|YP_002786559.1| uroporphyrinogen III synthase HEM4 [Deinococcus deserti VCD115]
gi|226318809|gb|ACO46805.1| putative uroporphyrinogen III synthase HEM4 [Deinococcus deserti
VCD115]
Length = 277
Score = 39.8 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 25/236 (10%), Positives = 59/236 (25%), Gaps = 30/236 (12%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ------SYGAIAITSSESLSTLP 64
++ IQK G IP + P + L+ + A+ +
Sbjct: 16 RSEEMTTLIQKYGGIPTVAPSMREQKLDLTAALSRFEADLRAGEVHAVVCMTGVGTRMFL 75
Query: 65 ANFCRHT----------PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFT 114
+ P G A + G + I + ++ + + + Q +
Sbjct: 76 QDLLARDAETLARLQGVPFVVRGSKPAQALKTFGLSGISVPRPHTWHEVQDHLLQTLQAG 135
Query: 115 PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI----AYPETTMKNLLQNADAI 170
++ G L + I + + Y +L D +
Sbjct: 136 QHA-VMLEYGDAPPAAMLRTLAQAGIRVTSVPVYRCAFPADTLPLAHAIRDTVLFGQDVL 194
Query: 171 LFYARSSVLYFFSLPLPAKIS---------AAFLCLSNNIASAIPASYKNVVTVAC 217
L + + VL+ K+ + + + + +
Sbjct: 195 LLSSGTQVLHLLKFAERLKLQDELRVALNRMVVVSIGPACSESAGELGIRIDLECN 250
>gi|239826971|ref|YP_002949595.1| uroporphyrinogen-III synthase [Geobacillus sp. WCH70]
gi|239807264|gb|ACS24329.1| Uroporphyrinogen III synthase HEM4 [Geobacillus sp. WCH70]
Length = 266
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 53/234 (22%), Gaps = 29/234 (12%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIH-----DRESVFLAMQQSYGAIAITSSESLSTL---- 63
I+K G I ++ P + + + + T+ + TL
Sbjct: 15 EEMTTLIEKQGGIAIVRPAQGILFSKEGELEDEIRAVIAMRPDWFIFTTGIGVETLLEAA 74
Query: 64 ------PANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
A K + +I K
Sbjct: 75 ERGKVKEEWVKTIQHANVAVRGYKTAAALKKIGVAPVAASDDGTTKGLIRSLNEYSFAGK 134
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP---ETTMKNLLQNADAILFYA 174
+I + +++L E+ + Y + + + + DA+ F
Sbjct: 135 KVIVQLHGTTSPTLKEFLEENHAIYTELLPYRHVAPDPEVLEKLYEEVIHRKVDAVCFTT 194
Query: 175 RSSVLYFFSLPLP----------AKISAAFLCLSNNIASAIPASYKNVVTVACF 218
V + FS + A A+ V VA
Sbjct: 195 EVQVRFLFSFVKEQKDIEWFRQSFNEHVIACAVGKVTAEALYEEGIVRV-VAPE 247
>gi|307717110|gb|ADN88608.1| uroporphyrinogen-III synthase [Listeria ivanovii subsp.
londoniensis]
Length = 165
Score = 39.4 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 15/159 (9%), Positives = 42/159 (26%), Gaps = 3/159 (1%)
Query: 32 SYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ 91
S + I TS+ +++ A P + +
Sbjct: 1 IETRPRNISFTSMQLE-VEWIFFTSANAVTYFFARQNVIQPYKYAVIGEQTSEKLAEYGF 59
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
++ + E + + ++ E+ L E + ++ Y +
Sbjct: 60 SPSFIPSAYQTEIFLAEWLNRYPEKTSVLLPKSNLSRTIIEETLNEKGYFVFPVELYETI 119
Query: 152 DIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPA 188
+ + I+F + S+ F+++
Sbjct: 120 VPTASRLELITIFARDEKQIIIFASPSAWKSFYAVAKNF 158
>gi|164662845|ref|XP_001732544.1| hypothetical protein MGL_0319 [Malassezia globosa CBS 7966]
gi|159106447|gb|EDP45330.1| hypothetical protein MGL_0319 [Malassezia globosa CBS 7966]
Length = 435
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 24/88 (27%), Gaps = 9/88 (10%)
Query: 150 SQDIAYPETTMKNLLQNADAILFYARSSVLYFF-SLPLPAKI-------SAAFLCLSNNI 201
I E+ + I+F++ S Y L I + C+
Sbjct: 344 RPPIQSMESFQPPQPAQPNWIVFFSPSGGNYALPELTQRRWIVPFERETGSKVACIGATT 403
Query: 202 ASAIPA-SYKNVVTVACFPKETSLLKLL 228
A + +A P +L +
Sbjct: 404 AQWVRQNLGFEPHAIAARPTPDALRSCI 431
>gi|212534344|ref|XP_002147328.1| uroporphyrinogen-III synthase (UroS), putative [Penicillium
marneffei ATCC 18224]
gi|210069727|gb|EEA23817.1| uroporphyrinogen-III synthase (UroS), putative [Penicillium
marneffei ATCC 18224]
Length = 361
Score = 39.0 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 9/105 (8%), Positives = 23/105 (21%), Gaps = 21/105 (20%)
Query: 141 PLRVIDCYYSQDIAYPE----------TTMKNLLQNADAILFYAR---SSVLYFFSLPLP 187
+ + Y + + E + Q + ++ +VL +L
Sbjct: 244 NVDELVVYETTQMEGFETQFQDVVRKGEELLKNEQTPLWTVIFSPTGCDAVLRTLNLLDS 303
Query: 188 AKISA-------AFLCLSNNIASAI-PASYKNVVTVACFPKETSL 224
+ + + VA P +
Sbjct: 304 NNKDTNSSKRRCRIVTIGPTTKDHLITKYGFEPDVVARRPTPEGI 348
>gi|221308140|ref|ZP_03589987.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312464|ref|ZP_03594269.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317398|ref|ZP_03598692.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321661|ref|ZP_03602955.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 481
Score = 39.0 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 18/205 (8%), Positives = 48/205 (23%), Gaps = 9/205 (4%)
Query: 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESLSTLPANFC 68
+ +K++ G + P + + L ++ + TS ++
Sbjct: 263 EDEDPLADKLRDSGADLIEWPKWRTENMPVNEEILRKIGTFEDVFFTSRRAVCEFFRALA 322
Query: 69 RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
Q + L I + ++
Sbjct: 323 SQKIDIRQL----TAKLSAASEQAKTELEKRGFLVTAIQPDSEKRLVVGSRHAVENMQKH 378
Query: 129 FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA 188
Y+ + + E+ + ++ + + LP P+
Sbjct: 379 ESCSFYITHE--NVIDDRFTHMIQRTISESPLHMVICPNKLSVQQLINGGEQIGILPEPS 436
Query: 189 KISAAFLCLSNNIASAIPASYKNVV 213
+C+ ++ SA V
Sbjct: 437 ASRPPIVCIGDD--SAAGIYGFTAV 459
>gi|50955595|ref|YP_062883.1| ATP-dependent RNA helicase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50952077|gb|AAT89778.1| ATP-dependent RNA helicase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 531
Score = 39.0 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM 29
I+ TR +A R +++ G V +
Sbjct: 251 RILFTRTKHQAKRLAKQLTSAGVPAVDL 278
>gi|16077397|ref|NP_388210.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
subtilis str. 168]
gi|1171663|sp|P42437|NASF_BACSU RecName: Full=Uroporphyrinogen-III C-methyltransferase;
Short=Urogen III methylase; AltName: Full=SUMT; AltName:
Full=Uroporphyrinogen III methylase; Short=UROM
gi|710022|dbj|BAA06356.1| S-adenosyl-L-methionine:uroporphyrinogen III [Bacillus subtilis]
gi|1805400|dbj|BAA08962.1| S-adenosyl-L-methionine:uroporphyrinogen III methyltransferase
[Bacillus subtilis]
gi|2632614|emb|CAB12122.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis subsp.
subtilis str. 168]
Length = 483
Score = 39.0 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 18/205 (8%), Positives = 48/205 (23%), Gaps = 9/205 (4%)
Query: 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESLSTLPANFC 68
+ +K++ G + P + + L ++ + TS ++
Sbjct: 265 EDEDPLADKLRDSGADLIEWPKWRTENMPVNEEILRKIGTFEDVFFTSRRAVCEFFRALA 324
Query: 69 RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
Q + L I + ++
Sbjct: 325 SQKIDIRQL----TAKLSAASEQAKTELEKRGFLVTAIQPDSEKRLVVGSRHAVENMQKH 380
Query: 129 FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA 188
Y+ + + E+ + ++ + + LP P+
Sbjct: 381 ESCSFYITHE--NVIDDRFTHMIQRTISESPLHMVICPNKLSVQQLINGGEQIGILPEPS 438
Query: 189 KISAAFLCLSNNIASAIPASYKNVV 213
+C+ ++ SA V
Sbjct: 439 ASRPPIVCIGDD--SAAGIYGFTAV 461
>gi|184201353|ref|YP_001855560.1| putative uroporphyrinogen III synthase [Kocuria rhizophila DC2201]
gi|183581583|dbj|BAG30054.1| putative uroporphyrinogen-III synthase [Kocuria rhizophila DC2201]
Length = 279
Score = 39.0 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 28/260 (10%), Positives = 67/260 (25%), Gaps = 40/260 (15%)
Query: 3 IVIT---RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESV------FLAMQQSYGAIA 53
+ +T R ++ ++ G P E + + G +
Sbjct: 14 VAVTAHRRATEQGG----AFERHGARVRYAPALKLTPADEDDGVLAATRELLASAPGTVL 69
Query: 54 ITSSESLSTLPANFCRHT---------PIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
+T+ L A H ++ A Q + I S
Sbjct: 70 VTTGYGLKRWLAVAREHGLDEELLAALRASSVLSRGAKATGQLRASGIPCAYTGSSGRTA 129
Query: 105 IIVEQKVLFT--PQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTM-- 160
+V++ + P+ + + D L +P+R + Y + +
Sbjct: 130 ELVDRLLAGDPAPRGTVTVQVHGTPDEEQLDRLRTAGLPVRTVAPYRWESADEGSSLATL 189
Query: 161 --KNLLQNADAILFYARSSVLYFFSLPLPAKI-----------SAAFLCLSNNIASAIPA 207
+ + D + F A +V F + + +
Sbjct: 190 VRDAVAGHVDYVTFTAAPAVDAVFDAARTLGALEDFQRALRDGRCTPVAIGPVCVQPLEE 249
Query: 208 SYKNVVTVACFPKETSLLKL 227
+ V V + ++++
Sbjct: 250 AGIPAV-VPERFRLGAMVRA 268
>gi|326384286|ref|ZP_08205967.1| DEAD/DEAH box helicase domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
gi|326196884|gb|EGD54077.1| DEAD/DEAH box helicase domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
Length = 499
Score = 39.0 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM 29
I+ TR +A + +K+ G V +
Sbjct: 247 RILFTRTKHQAKKLAKKLTAEGIPAVDL 274
>gi|126741093|ref|ZP_01756775.1| dTDP-glucose 4,6-dehydratase [Roseobacter sp. SK209-2-6]
gi|126717857|gb|EBA14577.1| dTDP-glucose 4,6-dehydratase [Roseobacter sp. SK209-2-6]
Length = 350
Score = 39.0 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 22/201 (10%), Positives = 49/201 (24%), Gaps = 9/201 (4%)
Query: 1 MYIVITRPIKKA----LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITS 56
M I++T A G+ V + + E+V A Q A
Sbjct: 1 MKILVT---GGAGFIGSAVVRLAIARGHQVVNLDALTYAACLENVAQAAQSPNYAFVEAD 57
Query: 57 SESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQ 116
+ L F H P + A+ + + N ++ + +
Sbjct: 58 IRDRAALDRVFSDHKPDVVMHLAAESHVDRSIDGPGDFIETNITGTFNMLEAARKHWIEA 117
Query: 117 KPLIYLGGKPRNFHFEDYLIEHKIPLRVID--CYYSQDIAYPETTMKNLLQNADAILFYA 174
+ + + ++ + Y + + L A A +
Sbjct: 118 GRPEAFRFHHISTDEVYGSLPNDPEVQFTEETSYDPRSPYSASKAASDHLVRAWAETYGL 177
Query: 175 RSSVLYFFSLPLPAKISAAFL 195
+ + P +
Sbjct: 178 PVLLTNCSNNYGPYHFPEKLI 198
>gi|20093735|ref|NP_613582.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19886632|gb|AAM01512.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 449
Score = 38.6 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 37/168 (22%), Gaps = 11/168 (6%)
Query: 58 ESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQK 117
+ + R P I + F + F + L +++ E
Sbjct: 116 HGVVADLEEYERPEPEDEIDRLCLEYHHPRWFVEKFGALLDEDELKELM-EVHNEPPEYY 174
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDC--YYSQDIAYPETTMKNLLQNADAILFYAR 175
EH + + Y + ++ L + +
Sbjct: 175 TFRVNTTAADVEDVLREFEEHGFEVERGEYVDYCIRVKKGQPLRLEELECWREGHIVPQD 234
Query: 176 SSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+ + P IA A +A ++ +
Sbjct: 235 EAAALVTEILNPQ--------PGERIADLCAAPGGKTTHIAQLTEDEA 274
>gi|328870953|gb|EGG19325.1| hypothetical protein DFA_02112 [Dictyostelium fasciculatum]
Length = 623
Score = 38.6 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 20/78 (25%), Gaps = 9/78 (11%)
Query: 160 MKNLLQNADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPA-SYK 210
+ + I+F++ S V Y + + + +
Sbjct: 538 LNMIKDRIQWIVFFSPSGVDYIINNHKSLIHSESNTGCANIRIASIGPTTTKHLKEQYEI 597
Query: 211 NVVTVACFPKETSLLKLL 228
+ P SLL +
Sbjct: 598 TPNITSSSPNAQSLLNSI 615
>gi|145300288|ref|YP_001143129.1| glycosyl transferase family protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853060|gb|ABO91381.1| glycosyltransferase, family 1 [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 348
Score = 38.6 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 55/222 (24%), Gaps = 26/222 (11%)
Query: 1 MYIV----------ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYG 50
M I+ I+R ++ G L + Y
Sbjct: 1 MRILFGVQGTGNGHISRSR----TLARALRAQGLEVDY--LFSGRPADGYFEMDEFGDYR 54
Query: 51 ---AIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
I S E + +P+ L + I + S + A
Sbjct: 55 TFAGITFVSHEGAISGWRTLKGLSPLR-FWRDMRALDCRDYDLVISDFEPLSAHAAHRWG 113
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLR-----VIDCYYSQDIAYPETTMKN 162
+ + + Q + + F L+ H P+R + + +
Sbjct: 114 KPSLTISHQASFDWPIPRWGESGFNRQLMRHFAPVRQSLGLHWFHFGQPLLPPIIDPIVA 173
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
L N +++ +L F+C I SA
Sbjct: 174 LPDNQQILVYLPFEQTEAIAALLSRFNQQ-RFVCFHPAIRSA 214
>gi|296168086|ref|ZP_06850152.1| serine 3-dehydrogenase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896893|gb|EFG76521.1| serine 3-dehydrogenase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 249
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 11/34 (32%), Gaps = 3/34 (8%)
Query: 197 LSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ A + A +VV VA + L
Sbjct: 20 IGEATAQTLAAQGFHVVAVARRADR---INALAR 50
>gi|320094514|ref|ZP_08026286.1| hypothetical protein HMPREF9005_0898 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319978556|gb|EFW10127.1| hypothetical protein HMPREF9005_0898 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 885
Score = 38.3 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 175 RSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+++ F + ++ A + +A A V+ VA E SLL L
Sbjct: 597 SATIEEFADFASRSGLTPALYSVHEPVAGAARELGWTVMQVA----EESLLDL 645
>gi|121700138|ref|XP_001268334.1| uroporphyrinogen-III synthase (UroS), putative [Aspergillus
clavatus NRRL 1]
gi|119396476|gb|EAW06908.1| uroporphyrinogen-III synthase (UroS), putative [Aspergillus
clavatus NRRL 1]
Length = 329
Score = 38.3 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 3/77 (3%), Positives = 13/77 (16%), Gaps = 13/77 (16%)
Query: 168 DAILFYARSSVLYFFS---------LPLPAKISAAFLCLSNNIASAIPA-SYKNVVTVAC 217
++ ++ + + + A
Sbjct: 249 MWVVVFSPTGCDAMLRVLEAGEGVGALRGDGRRIFVATIGPTTRDHLREVYGFEPDVCAE 308
Query: 218 FPKETSL---LKLLPLR 231
P + ++ R
Sbjct: 309 RPSPEGVAAGIEAFMRR 325
>gi|320526778|ref|ZP_08027968.1| 5'-nucleotidase protein [Solobacterium moorei F0204]
gi|320132746|gb|EFW25286.1| 5'-nucleotidase protein [Solobacterium moorei F0204]
Length = 634
Score = 38.3 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 17/169 (10%), Positives = 46/169 (27%), Gaps = 12/169 (7%)
Query: 10 KKALRTQEKIQKMGYIPVMMPLSYF----IHDRESVFLAMQQSYGAI-AITSSESLSTLP 64
+ A +T +K+++ G ++ +S + + I I S + + L
Sbjct: 210 EAAKKTVQKLKEEGAQVIVC--LSHSGTNKDPSKSEDEILAEKVDGIDVIVSGHTHTVLT 267
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGG 124
++ K + ++ + +
Sbjct: 268 EPIHKNKTWIVSAGCFGKYLGLLDINAETKEKIDYQ-----LIPITAESPVDQTINAKIQ 322
Query: 125 KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ + E+YL ++ + Y + + N+ A L
Sbjct: 323 EYKTDINENYLKQYGYTMDQSIGYTNFPLTDVYEDYSAFTGNSMADLIT 371
>gi|52078932|ref|YP_077723.1| uroporphyrin-III C-methyltransferase [Bacillus licheniformis ATCC
14580]
gi|52784306|ref|YP_090135.1| NasF [Bacillus licheniformis ATCC 14580]
gi|52002143|gb|AAU22085.1| uroporphyrin-III C-methyltransferase [Bacillus licheniformis ATCC
14580]
gi|52346808|gb|AAU39442.1| NasF [Bacillus licheniformis ATCC 14580]
Length = 486
Score = 38.3 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 41/200 (20%), Gaps = 6/200 (3%)
Query: 16 QEKIQKMGYIPVMMPLSY-FIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIF 74
E +++ G V P + L + ++ TSS SL +
Sbjct: 267 VEALREQGAEVVEWPKWKSAETVPDDALLGRIACFDSLLFTSSASLRRFFSRLAALKIDV 326
Query: 75 AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDY 134
+ Q + + + + H
Sbjct: 327 REMRGRLYASDQ-----HVKAALEERGFEAFLQTEMPVSGSCLLIGSREAVQNYPHSGCE 381
Query: 135 LIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAF 194
++ + E + +L + + + P
Sbjct: 382 VLITHDRVIDSRFTSIIKREIDEFPIDIVLFSNRTCVELFVNEAETVGLHPEKTAARLQA 441
Query: 195 LCLSNNIASAIPASYKNVVT 214
CL+ A V
Sbjct: 442 FCLTEEAGERAAAVGFQRVH 461
>gi|297162147|gb|ADI11859.1| DNA polymerase IV [Streptomyces bingchenggensis BCW-1]
Length = 508
Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 197 LSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ A A+ + V E L++LL
Sbjct: 177 VGPATAEALRRAGITTVAETREAGEEELVRLLGK 210
>gi|149928341|ref|ZP_01916582.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Limnobacter sp. MED105]
gi|149822926|gb|EDM82171.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Limnobacter sp. MED105]
Length = 659
Score = 38.3 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 61/220 (27%), Gaps = 31/220 (14%)
Query: 24 YIPVMMPLSYFIH-------DRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT---PI 73
+ P+ + R + + I S L N +
Sbjct: 33 GHVMYFPVFELVPDLASLLTIRPWLETTTDKPNHLIVFVSPSVLEIAVTNLGQWPANVYC 92
Query: 74 FAIGEASACLARQ---------KGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGG 124
+G SA LA + H ++S LA+++ + ++ G
Sbjct: 93 GVMGRQSAKLAIDLGIPKDNIIAPTGENDHETEDSDGLARLLATHFEAGSC--RVMVCKG 150
Query: 125 KPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNAD--AILFYARSSVLYFF 182
F L+E + + V++CY + I +T + L + + ++
Sbjct: 151 PRGRVEFPKKLVEMQHDVTVLECYDRKVIEQSDTQCEALFARTSEAVLWITSSETIEALD 210
Query: 183 SLP--------LPAKISAAFLCLSNNIASAIPASYKNVVT 214
S K +A L I + V
Sbjct: 211 SQLARKSESRLKTLKETATVLTTHPRITAKCRELGYAHVV 250
>gi|325925712|ref|ZP_08187088.1| uroporphyrinogen-III synthase [Xanthomonas perforans 91-118]
gi|325926866|ref|ZP_08188148.1| uroporphyrinogen-III synthase [Xanthomonas perforans 91-118]
gi|325542767|gb|EGD14227.1| uroporphyrinogen-III synthase [Xanthomonas perforans 91-118]
gi|325543881|gb|EGD15288.1| uroporphyrinogen-III synthase [Xanthomonas perforans 91-118]
Length = 259
Score = 37.9 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 22/231 (9%), Positives = 57/231 (24%), Gaps = 16/231 (6%)
Query: 7 RPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRES---VFLAMQQSYGAIAITSSESLSTL 63
RP + + + + G + + + L + TS ++
Sbjct: 17 RPSGEHAPLRRAVARHGGRVLALSPWRLQTHDTAQARDALRQALAAPIAIFTSPAAVQAA 76
Query: 64 PANFCRHTPIFAIG----EASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
P A + +A G + + ++ +L P + +
Sbjct: 77 HRLAPLQRPAQAHWVSVGDGTARALHACGIDSVVRPARMDS---EGLLALPLLQAPLQAV 133
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNL--LQNADAILFYARSS 177
+ L + + D Y + ++++ L + + +
Sbjct: 134 GLITAPGGRGMLAPTLQQRGARIVRADVYRRVPLRLRASSIQALSLALPRSVLALSSAEA 193
Query: 178 VLYFFSLPLPA----KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSL 224
+ + S+ + A A+ A P L
Sbjct: 194 LTLVLQQLPAELVAAWQQRPVVASSDRMLDAARAAGFVHGMRAAGPLPQQL 244
>gi|205374356|ref|ZP_03227154.1| hypothetical protein Bcoam_14639 [Bacillus coahuilensis m4-4]
Length = 60
Score = 37.9 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 1/44 (2%), Positives = 9/44 (20%)
Query: 183 SLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + + + V ++++
Sbjct: 4 RNLTEYVRACKYAVIGSKTKQTAHNMGLEVHICPDTYTIEAMVE 47
>gi|228958437|ref|ZP_04120160.1| Uroporphyrinogen-III C-methyltransferase [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801295|gb|EEM48189.1| Uroporphyrinogen-III C-methyltransferase [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 474
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + S + + + S++S+
Sbjct: 253 KVLFTSATNKTSVMKQRLQEAGAEIYQIPTFKKEEYTVTSEQINKIFNVDRLVFCSADSV 312
Query: 61 STLPANFCRHTP 72
L + ++
Sbjct: 313 DILMQSCSKYHK 324
>gi|321313998|ref|YP_004206285.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis BSn5]
gi|320020272|gb|ADV95258.1| uroporphyrin-III C-methyltransferase [Bacillus subtilis BSn5]
Length = 481
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/224 (8%), Positives = 53/224 (23%), Gaps = 14/224 (6%)
Query: 10 KKALRTQEKIQKMGYIPVMMPLSYFIHDRES-VFLAMQQSYGAIAITSSESLSTLPANFC 68
+ +K++ G + P + + L ++ + TS ++
Sbjct: 263 EDEDPLADKLRDSGADLIEWPKWRTENMPVNEDILRKIGTFEDVFFTSRRAVCEFFRALA 322
Query: 69 RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
Q + L I + ++
Sbjct: 323 SQKIDIRQL----TAKLSTASEQAKTELEKRGFLVTAIQPDSEKCLVVGSRHAVEFMQKH 378
Query: 129 FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA 188
Y+ + + E+ + ++ + + P +
Sbjct: 379 ESCSFYITHE--NVIDDRFTHMIQRTISESPLHMVICPNKLSVQQLINGGEQIGISPELS 436
Query: 189 KISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLRR 232
+C+ ++ SA A V + LL + ++
Sbjct: 437 ASRPPIVCIGDD--SAAGAYGFTAVQE-----QDELLAFIQNQQ 473
>gi|302798058|ref|XP_002980789.1| hypothetical protein SELMODRAFT_420371 [Selaginella moellendorffii]
gi|300151328|gb|EFJ17974.1| hypothetical protein SELMODRAFT_420371 [Selaginella moellendorffii]
Length = 231
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 26/103 (25%), Gaps = 7/103 (6%)
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
L +F L H + +D Y + + L DA++F + + V
Sbjct: 107 CGGLSEPDVVPNFVAALQRHGWDVERLDAYATSW-TGSASVTPLLAGAVDALVFTSTAEV 165
Query: 179 LYFFSLPLPAKI------SAAFLCLSNNIASAIPASYKNVVTV 215
+ + A +V +
Sbjct: 166 EGLLMALQAHHLTLASLWPCVLVAFGPVTARGAKQLGVDVDVI 208
>gi|227508200|ref|ZP_03938249.1| conserved hypothetical protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227192429|gb|EEI72496.1| conserved hypothetical protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 225
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 164 LQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETS 223
+Q AD + ++ ++ + + SA + LS +A + A K V VA + S
Sbjct: 36 IQEADYFVITSQFALSIYLKKLITFNRSAGLIVLSKKMAQRVRAIGKQAVIVAPEENQRS 95
Query: 224 LL 225
L+
Sbjct: 96 LV 97
>gi|21229676|ref|NP_635593.1| uroporphyrinogen-III synthase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66766553|ref|YP_241315.1| uroporphyrinogen-III synthase [Xanthomonas campestris pv.
campestris str. 8004]
gi|21111159|gb|AAM39517.1| uroporphyrinogen-III synthase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66571885|gb|AAY47295.1| uroporphyrinogen-III synthase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 266
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/233 (9%), Positives = 57/233 (24%), Gaps = 26/233 (11%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIH--------DRESVFLAMQQSYGAIAI 54
++ RP + + + + G L + L +
Sbjct: 21 LLSLRPSGEHAPLRRAVARHGGQ-----LLAVSPWRLQINDTLQARDALRQALGAPIVVF 75
Query: 55 TSSESLSTLPANFCRHTPIFAIG----EASACLARQKGFTQIFHGKDNSINLAKIIVEQK 110
TS ++ P A E +A + G + + ++
Sbjct: 76 TSPAAVHAAHRLLPLQRPGPAQWASVGEGTARALQACGIDAVVRPARMDS---EGLLALP 132
Query: 111 VLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMK--NLLQNAD 168
V P + + L + + D Y + +T+
Sbjct: 133 VFDAPLHAVGLITAPGGRGTLSPALEQRGAQILRADVYQRVALRLRASTLHALESALPRS 192
Query: 169 AILFYARSSVLYFFSLPLPAK---ISAA-FLCLSNNIASAIPASYKNVVTVAC 217
+ + ++ P+ + + S+ + A A+ V +
Sbjct: 193 VMALSSSEALTLIVQQLPPSLATALKTRPVVASSDRMLEAARAAGFVQVHRSE 245
>gi|330944701|gb|EGH46634.1| uroporphyrinogen-III synthase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 79
Score = 37.5 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 14/50 (28%), Gaps = 3/50 (6%)
Query: 168 DAILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIPASYKNVVT 214
+ ++ + + L P S +AS A+ V
Sbjct: 6 NGLVVSSGQGFEHLLQLAGDSWPDLADLPLFVPSPRVASIARAAGARTVI 55
>gi|331222110|ref|XP_003323729.1| hypothetical protein PGTG_05631 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302719|gb|EFP79310.1| hypothetical protein PGTG_05631 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 442
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 193 AFLCLSNNIASAIPASYKN--VVTVACFPKETSLLKLL 228
+ A+ + + Y + + V P SLL+ +
Sbjct: 390 KVAAIGATTATFLASHYYHSFPIVVPDKPNPASLLQAI 427
>gi|119714620|ref|YP_921585.1| bifunctional uroporphyrinogen-III synthetase/response regulator
domain protein [Nocardioides sp. JS614]
gi|119535281|gb|ABL79898.1| Uroporphyrinogen III synthase HEM4 [Nocardioides sp. JS614]
Length = 372
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 25/259 (9%), Positives = 57/259 (22%), Gaps = 33/259 (12%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQ-------SYGAIAI 54
I +T +K +++ G P +R I
Sbjct: 11 RIGVT-AARKVDEQVTLLERRGATVEWAPALSLDPNRVDDAALRAATEEVLAAPVDMILA 69
Query: 55 TSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQ----------IFHGKDNSINLAK 104
T+ + T R + + A + S
Sbjct: 70 TTGIGMRTWFDAAERWGLLPRLLRALGSAEILARGPKSVGALRARGLRELWAPESECFED 129
Query: 105 IIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLL 164
++ + ++ L + + Y P +
Sbjct: 130 VLEHLRGRSLAGLRIVVQEHGQSLSMVAHALRRQGAEVTTVTVYRVVSAEDPGPMFALVD 189
Query: 165 ----QNADAILFYARSSVLYFF----------SLPLPAKISAAFLCLSNNIASAIPASYK 210
++ DA+ F + +V L + C+ A+A +
Sbjct: 190 LVADRSLDAVTFTSAPAVAALMDAAGSTGRRDELVSAFQADVVAACVGPVTAAAF-EMWG 248
Query: 211 NVVTVACFPKETSLLKLLP 229
+ +++K L
Sbjct: 249 VPTIFPERSRLGAMVKQLE 267
>gi|229109625|ref|ZP_04239214.1| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus Rock1-15]
gi|228673873|gb|EEL29128.1| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus Rock1-15]
Length = 474
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + S + + + S++S+
Sbjct: 253 KVLFTSSTNKTSVMKQRLQEAGAEIYQIPTFKKEEYTVTSEQINKIFNVDRLVFCSADSV 312
Query: 61 STLPANFCRHTP 72
L + ++
Sbjct: 313 DILMQSCSKYHK 324
>gi|28379144|ref|NP_786036.1| hypothetical protein lp_2623 [Lactobacillus plantarum WCFS1]
gi|254557273|ref|YP_003063690.1| hypothetical protein JDM1_2106 [Lactobacillus plantarum JDM1]
gi|28271982|emb|CAD64887.1| unknown [Lactobacillus plantarum WCFS1]
gi|254046200|gb|ACT62993.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
Length = 283
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 18/222 (8%), Positives = 54/222 (24%), Gaps = 14/222 (6%)
Query: 16 QEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLST-------LPANFC 68
+++ G P +P+ D + A+ + ++
Sbjct: 48 SDRLLAAGLAPQQLPVLEIPDDFQDHLFERINQQYAMGDPAGDAAWNQLSAALPKVDQLL 107
Query: 69 RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
R+ + + F + S + +++ + K L G
Sbjct: 108 RNFRDYIEDQYGMWAYISAPFLKDLADFTGSAPVLEVMAGNGYISKGLKRLH-PGQPIYT 166
Query: 129 FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY---FFSLP 185
+D+ E + + K I+ ++ +
Sbjct: 167 TDSKDWTHETGNQTGRHPVTTIEALDAVSAFNKYAATIKYVIMAWSPDKLTIDWDLLQAM 226
Query: 186 LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ + + + + + A + ++ KL
Sbjct: 227 RQSPYDIPLIVIGEKYGATGSKQFWDH---ANYQDNEAVTKL 265
>gi|319648762|ref|ZP_08002973.1| NasF protein [Bacillus sp. BT1B_CT2]
gi|317389181|gb|EFV69997.1| NasF protein [Bacillus sp. BT1B_CT2]
Length = 486
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 41/200 (20%), Gaps = 6/200 (3%)
Query: 16 QEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIF 74
E +++ G V P + L + ++ TSS SL +
Sbjct: 267 VEALREQGAEVVEWPKWNSAETVPDDALLGRIACFDSLLFTSSASLRRFFSRLAALKIDV 326
Query: 75 AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDY 134
+ Q + + + + H
Sbjct: 327 REMRGRLYASDQ-----HVKAALEERGFEAFLQTEMPVSGSCLLIGSREAVQNYPHSGCE 381
Query: 135 LIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAF 194
++ + E + +L + + + P
Sbjct: 382 VLITHDRVIDSRFTSIIKREIDEFPIDIVLFSNRTCVELFVNEAETVGLHPEKTAARLQA 441
Query: 195 LCLSNNIASAIPASYKNVVT 214
CL+ A V
Sbjct: 442 FCLTEEAGERAAAVGFQRVH 461
>gi|271964832|ref|YP_003339028.1| non-ribosomal peptide synthetase-like protein [Streptosporangium
roseum DSM 43021]
gi|270508007|gb|ACZ86285.1| Non-ribosomal peptide synthetase modules and related protein-like
protein [Streptosporangium roseum DSM 43021]
Length = 1864
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 7/61 (11%), Positives = 20/61 (32%)
Query: 11 KALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRH 70
+A ++ + G P+ P+ + +R+ + Y S + + +
Sbjct: 1301 QAEEYFTRLVEEGAEPLSAPIISVVGERDPNTEFHAERYTEWDFLSPRTALAVLDEGGHY 1360
Query: 71 T 71
Sbjct: 1361 F 1361
>gi|111223560|ref|YP_714354.1| 2,3-dihydroxybenzoate-AMP ligase [Frankia alni ACN14a]
gi|111151092|emb|CAJ62801.1| 2,3-dihydroxybenzoate-AMP ligase [Frankia alni ACN14a]
Length = 578
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 22/84 (26%), Gaps = 6/84 (7%)
Query: 150 SQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASY 209
+ T + NA A + LPA + C + A
Sbjct: 241 TGKPKLIPRTHWDYAYNAAASAGLCGLTAEDVCLAALPAAHNFPLACPG-----ILGALG 295
Query: 210 KNVVTV-ACFPKETSLLKLLPLRR 232
V A P + +LL R
Sbjct: 296 VGATVVLAPSPSPEIVFELLARER 319
>gi|307717064|gb|ADN88585.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + ++V +FF + P ++ + + N V + LK
Sbjct: 19 WLFLTSANAVEHFF-MNQPGEVHYKIAVIGEKTREKLAEYGYNPSFVPSIYQSEMFLK 75
>gi|169770231|ref|XP_001819585.1| uroporphyrinogen-III synthase (UroS) [Aspergillus oryzae RIB40]
gi|238487380|ref|XP_002374928.1| uroporphyrinogen-III synthase (UroS), putative [Aspergillus flavus
NRRL3357]
gi|83767444|dbj|BAE57583.1| unnamed protein product [Aspergillus oryzae]
gi|220699807|gb|EED56146.1| uroporphyrinogen-III synthase (UroS), putative [Aspergillus flavus
NRRL3357]
Length = 309
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 6/90 (6%), Positives = 25/90 (27%), Gaps = 8/90 (8%)
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPL---PAKISAAFLCLSNNIASAIP- 206
+ + E + ++ A ++ ++ + + + + +
Sbjct: 214 EAVRASEEFLGGGVERAVWVVVFSPTGCDAMVRVLKGLGDGERRVFVATIGPTTRDHLKN 273
Query: 207 ASYKNVVTVACFPKET----SLLKLLPLRR 232
A P + +++ + RR
Sbjct: 274 KYGFEADVCAEKPSQEGVGMGIVEFMENRR 303
>gi|315053841|ref|XP_003176295.1| hypothetical protein MGYG_00382 [Arthroderma gypseum CBS 118893]
gi|311338141|gb|EFQ97343.1| hypothetical protein MGYG_00382 [Arthroderma gypseum CBS 118893]
Length = 347
Score = 37.1 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 3/45 (6%), Positives = 9/45 (20%), Gaps = 1/45 (2%)
Query: 186 LPAKISAAFLCLSNNIASAI-PASYKNVVTVACFPKETSLLKLLP 229
++ + + A P L + +
Sbjct: 289 RWSRFDCRIATIGPTTRDHLVSNFGVQPDVCAEKPSPEGLAEGIE 333
>gi|307325690|ref|ZP_07604891.1| DNA-directed DNA polymerase [Streptomyces violaceusniger Tu 4113]
gi|306888818|gb|EFN19803.1| DNA-directed DNA polymerase [Streptomyces violaceusniger Tu 4113]
Length = 747
Score = 37.1 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 12/34 (35%)
Query: 197 LSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ A + + + V E L++LL
Sbjct: 177 VGPATAETLRRAGIHTVAETREAGEAELVRLLGR 210
>gi|18312031|ref|NP_558698.1| hypothetical protein PAE0589 [Pyrobaculum aerophilum str. IM2]
gi|18159456|gb|AAL62880.1| hypothetical protein PAE0589 [Pyrobaculum aerophilum str. IM2]
Length = 212
Score = 37.1 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 17/188 (9%), Positives = 40/188 (21%), Gaps = 18/188 (9%)
Query: 48 SYGAIAITSSESLSTLP-ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKII 106
+ + S + A + S L K +
Sbjct: 37 DGDYLVVMSPVVADVVNLAELKKRFKCIICVGPSTAERVGGCVVPREFTSFGIARLLKEM 96
Query: 107 VEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQN 166
++ L N L + + Y L+++
Sbjct: 97 AP--------GRVVVLRSSAGNEV----LRSLMPEVIEVPVYDIYIDEGKLKEATRLIES 144
Query: 167 ADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKE-TSLL 225
A ++ + + + + + + + VA ++
Sbjct: 145 AKTVVLTSSTVAEAVAR--RADLGGKVVVAIGRVTSEKLKELGVRHI-VAEESTIKNAVW 201
Query: 226 KLL-PLRR 232
L LRR
Sbjct: 202 TALNALRR 209
>gi|332158459|ref|YP_004423738.1| hypothetical protein PNA2_0818 [Pyrococcus sp. NA2]
gi|331033922|gb|AEC51734.1| hypothetical protein PNA2_0818 [Pyrococcus sp. NA2]
Length = 220
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAI 52
+TRP+ A E+++ G++ + FI + L Y
Sbjct: 84 LTRPLDGAREVLEELKDRGHVVISFSAEDFIPGIKEYRLKKSGLYDLF 131
>gi|148544918|ref|YP_001272288.1| uroporphyrinogen-III C-methyltransferase [Lactobacillus reuteri DSM
20016]
gi|184154255|ref|YP_001842596.1| uroporphyrinogen-III C-methyltransferase CobA [Lactobacillus
reuteri JCM 1112]
gi|227364058|ref|ZP_03848158.1| uroporphyrinogen-III C-methyltransferase [Lactobacillus reuteri
MM2-3]
gi|325683263|ref|ZP_08162779.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Lactobacillus reuteri MM4-1A]
gi|60172693|gb|AAX14527.1| uroporphyrinogen-III methyltransferase/uroporphyrinogen-III
synthase hemd+coba [Lactobacillus reuteri]
gi|148531952|gb|ABQ83951.1| uroporphyrinogen-III C-methyltransferase [Lactobacillus reuteri DSM
20016]
gi|183225599|dbj|BAG26116.1| uroporphyrinogen-III C-methyltransferase CobA [Lactobacillus
reuteri JCM 1112]
gi|227070980|gb|EEI09303.1| uroporphyrinogen-III C-methyltransferase [Lactobacillus reuteri
MM2-3]
gi|324977613|gb|EGC14564.1| uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
[Lactobacillus reuteri MM4-1A]
Length = 464
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 60/222 (27%), Gaps = 31/222 (13%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM--PLSYFIHDRESVFLAMQQSYGAIAITSSES 59
+++I + R ++ +G L V L Y AI +
Sbjct: 251 HLLIPFSEHQ--RLFNSLEDLGATADFYQRALIE----PLEVTLPSIDEYDAIIVD---D 301
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ L +K + ++ P K
Sbjct: 302 VLAYHQFITLLIKNGIDVR---QLIDKKIIASNHRVVQALQKTGILAIKGMPQDIPVKRT 358
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
I +GG ++ +L ++ R + + L+ A++F + +S+
Sbjct: 359 IEIGGSKPTYNIGTFLSLYEKKKRSLV-------------LPFDLKEFSAVIFPSTASIN 405
Query: 180 YFFSLPLPAKIS----AAFLCLSNNIASAIPASYKNVVTVAC 217
F + ++S + + A + V +
Sbjct: 406 DFLASLSEKQLSQVSMLKAFAMGKKVQQAAIQAGFGHVVICP 447
>gi|228989379|ref|ZP_04149368.1| Uroporphyrinogen-III C-methyltransferase [Bacillus pseudomycoides
DSM 12442]
gi|228770326|gb|EEM18901.1| Uroporphyrinogen-III C-methyltransferase [Bacillus pseudomycoides
DSM 12442]
Length = 474
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 16/204 (7%), Positives = 53/204 (25%), Gaps = 16/204 (7%)
Query: 15 TQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPI 73
+K+Q G +P + ++ + + S+ES++ L + +H
Sbjct: 266 LAQKLQAAGAEIYQIPTFKKQKYVLTPEQISEIFNAERLVFCSAESVAILFQSCAQHQKD 325
Query: 74 FAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFED 133
+A+ + ++ + + + R ++
Sbjct: 326 IRSLKATLQYMNATTQKALMQYG---------LLSLPATLSNETTVYLGRNINRIAAIQE 376
Query: 134 YLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFF----SLPLPAK 189
+ + + + +F R+++ F L
Sbjct: 377 KI-GAGSYIMTHEYTIDHRFDEVHSRTLTEFTWDSI-VFEGRAAIDTFITEVNRLGFTDI 434
Query: 190 ISAAFLCLSNNIASAIPASYKNVV 213
++ F + + + +
Sbjct: 435 LNLPFSYIDEPTLQYANKAGLHHI 458
>gi|224368679|ref|YP_002602841.1| signal transduction family protein (GGDEF domain protein)
[Desulfobacterium autotrophicum HRM2]
gi|223691395|gb|ACN14678.1| signal transduction family protein (GGDEF domain protein)
[Desulfobacterium autotrophicum HRM2]
Length = 629
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 16/201 (7%), Positives = 52/201 (25%), Gaps = 11/201 (5%)
Query: 5 ITRPIKK---ALRTQEKIQK---MG-YIPVMMPLSYFI--HDRESVFLAMQQSYGAIAIT 55
+TR ALR +++ + +G + ++ P + ++
Sbjct: 275 VTRAEHAGVVALRIAKQLAEPLHLGNHQVIVTPSIGISLFPQDGEDIETLLKNADIAMYF 334
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
S + + + + A+ + ++ + + E
Sbjct: 335 SKRMGPNMFSFYEQSMNADALKRMTIENHLRQALGRGEFALHYQPQFDLVTGEVCGAEAL 394
Query: 116 QKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYAR 175
+ + G F E+ + + + + T + L + +
Sbjct: 395 LRWHNWELGNVPPIEFISIAEENGMIVAIGEWVMRTACRQTRTWLDQGLPLQRIAVNVSV 454
Query: 176 SSVLY--FFSLPLPAKISAAF 194
+ + F ++
Sbjct: 455 NQFTHTDFLNMVKSILEETTL 475
>gi|120598029|ref|YP_962603.1| peptidase U32 [Shewanella sp. W3-18-1]
gi|120558122|gb|ABM24049.1| peptidase U32 [Shewanella sp. W3-18-1]
Length = 291
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 62/221 (28%), Gaps = 19/221 (8%)
Query: 14 RTQEKIQKMGYIPVMMPLSYFIHDRESVFL-AMQQSYGAIAITSSESLSTLPANFCRHTP 72
+ +++ G V+ L+ E L + + + + L
Sbjct: 52 ELAQMLKQAGKEVVISTLALIEASSEYTELKRQVDNGELMIEANDMAAVYLAKEHKLPFV 111
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
A + + L+K ++Q + P + G
Sbjct: 112 CGASINNYNRASLDILHGFGMQRFVMPVELSKAWLQQVIQNKPTFEVEVFGHGYLPLAHS 171
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA 192
C+ ++ + + + + + L + L SA
Sbjct: 172 AR------------CFTARHKQLTKDSCETICRQYSKGLLAQTQEMQPLLRLNGIQTQSA 219
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKE-----TSLLKLL 228
A L LS+ IA A+ +V V+ E SL++ L
Sbjct: 220 ACLDLSSEIA-AMNTMGVDVFRVSPSGTESIVRAESLIEAL 259
>gi|258652397|ref|YP_003201553.1| ribose 5-phosphate isomerase [Nakamurella multipartita DSM 44233]
gi|258555622|gb|ACV78564.1| ribose 5-phosphate isomerase [Nakamurella multipartita DSM 44233]
Length = 213
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 7/46 (15%), Positives = 13/46 (28%)
Query: 172 FYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVAC 217
S+V Y + + S A+A +V +
Sbjct: 26 LGTGSTVAYLLPALAARGLDIRCVATSPRTATAAGELGLRIVDFSE 71
>gi|320166883|gb|EFW43782.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 304
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 43/140 (30%), Gaps = 25/140 (17%)
Query: 118 PLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ-DIAYPETTMKNLLQNAD------AI 170
PL++ G+ R+ L IPL I Y + + +T ++ L
Sbjct: 162 PLLFPCGEKRHDAIPKALAAAGIPLSEIVVYQTSGNQDLFQTGLRATLDQRIDQADGVWF 221
Query: 171 LFYARSSVLYFFSLPLPAKIS------AAFLCLSNNIASAIPASY------------KNV 212
+F++ S V S L S F + AS + V
Sbjct: 222 VFFSPSGVDTALSSSLSLVQSLGVLHLLRFAAIGPTTASHLARQLQTFPDPSHPGACFAV 281
Query: 213 VTVACFPKETSLLKLLPLRR 232
A P SLL + R
Sbjct: 282 SATAPAPNADSLLVAMSQWR 301
>gi|238602044|ref|XP_002395573.1| hypothetical protein MPER_04353 [Moniliophthora perniciosa FA553]
gi|215466543|gb|EEB96503.1| hypothetical protein MPER_04353 [Moniliophthora perniciosa FA553]
Length = 111
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 21/77 (27%), Gaps = 16/77 (20%)
Query: 168 DAILFYARSSVLYFFSLPLPA---------------KISAAFLCLSNNIASAIPA-SYKN 211
I+F+A S+ + K A + + + +
Sbjct: 26 WWIIFFAPSAAQFVLPFIQEHFELPEETSNKSSNGSKPVARVAAIGPTTDTYLRETLHLR 85
Query: 212 VVTVACFPKETSLLKLL 228
V +A P L+ +
Sbjct: 86 VDAMAAKPTPEDLVSAI 102
>gi|207110647|ref|ZP_03244809.1| uroporphyrinogen-III synthase [Helicobacter pylori HPKX_438_CA4C1]
Length = 91
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 1/88 (1%)
Query: 132 EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKIS 191
+ L+EH I + Y ++ + L ++L + S F +
Sbjct: 5 DTILLEHGIDFKQAVVYENKLKHLTLSEQNALKPKEKSVLIFTAISHAKAFLHYFEFLEN 64
Query: 192 AAFLCLSNNIASAIPASYKNVVTVACFP 219
+ + N A + +A P
Sbjct: 65 YTAISIGNTTALYLQEQGIPS-YIAKKP 91
>gi|114645336|ref|XP_001168494.1| PREDICTED: leucine-rich repeat serine/threonine-protein kinase 2 [Pan
troglodytes]
Length = 2527
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 48/190 (25%), Gaps = 12/190 (6%)
Query: 50 GAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
I +P N + + G L +Q T+ S + + +
Sbjct: 1317 DIIRFLQQRLKKAVPYNRMKLMIVGNTGSGKTTLLQQLMKTKKSDPGMQSATVGIDVKDW 1376
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
+ ++ + E++ H + Y + Y + + +
Sbjct: 1377 PIQIRDKRKRDLVLNVWDFAGREEFYSTHPHFMTQRALYLAV---YDLSKGQAEVDAMKP 1433
Query: 170 ILF-----YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV--TVACFPKET 222
LF + S V+ + + C+S + + E
Sbjct: 1434 WLFNIKARASSSPVILIGTHLDVSDEKQRKACISKITKELLNKRGFPAIRDYHFVNATEE 1493
Query: 223 SLLKLLPLRR 232
S L R
Sbjct: 1494 S--DALAKLR 1501
>gi|227496959|ref|ZP_03927211.1| ATP-dependent RNA helicase [Actinomyces urogenitalis DSM 15434]
gi|226833567|gb|EEH65950.1| ATP-dependent RNA helicase [Actinomyces urogenitalis DSM 15434]
Length = 468
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM 29
I+ TR A R K+ G V +
Sbjct: 277 RILFTRTKHLARRLARKLVAAGIPAVEL 304
>gi|300782732|ref|YP_003763023.1| hypothetical protein AMED_0801 [Amycolatopsis mediterranei U32]
gi|299792246|gb|ADJ42621.1| hypothetical protein AMED_0801 [Amycolatopsis mediterranei U32]
Length = 110
Score = 36.7 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Query: 2 YIVI---TRPIKKALRTQEKIQKMGYIPVMM-PLSYFIHDRESVFLAMQQSYGAIAITSS 57
+++ TRP A+ ++ G V P+ + + G +
Sbjct: 10 RVLLVEFTRPDPAAVALGRLLRDDGVEVVHAGPVVTVEQIVRTAEQEDPDAVGVLGAAPP 69
Query: 58 ESLS 61
E L
Sbjct: 70 EDLE 73
>gi|146293900|ref|YP_001184324.1| peptidase U32 [Shewanella putrefaciens CN-32]
gi|145565590|gb|ABP76525.1| peptidase U32 [Shewanella putrefaciens CN-32]
Length = 291
Score = 36.7 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 60/221 (27%), Gaps = 19/221 (8%)
Query: 14 RTQEKIQKMGYIPVMMPLSYFIHDRESVFL-AMQQSYGAIAITSSESLSTLPANFCRHTP 72
+++ G V+ L+ E L + + + + L
Sbjct: 52 ELARMLKQAGKEVVISTLALIEASSEYTELKRQVDNGEFMIEANDMAAVYLAKEHKLPFV 111
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFE 132
A + + L+K ++ + P + G
Sbjct: 112 CGASINNYNRASLDILHGFGMQRFVMPVELSKAWLQHVIQNKPAFEVEVFGHGYLPLAHS 171
Query: 133 DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISA 192
C+ ++ + + + + + L + L SA
Sbjct: 172 AR------------CFTARHKQLTKDSCETICRQYSKGLLAQTQEMQPLLRLNGIQTQSA 219
Query: 193 AFLCLSNNIASAIPASYKNVVTVACFPKE-----TSLLKLL 228
A L LS+ IA A+ +V V+ E SL++ L
Sbjct: 220 ACLDLSSEIA-AMNTMGVDVFRVSPSGTESIVRAESLIEAL 259
>gi|163743493|ref|ZP_02150871.1| dTDP-glucose 4,6-dehydratase [Phaeobacter gallaeciensis 2.10]
gi|161383196|gb|EDQ07587.1| dTDP-glucose 4,6-dehydratase [Phaeobacter gallaeciensis 2.10]
Length = 350
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 18/198 (9%), Positives = 46/198 (23%), Gaps = 3/198 (1%)
Query: 1 MYIVITRPIKKALRTQEKIQ-KMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I++T ++ G+ V + + ++V A
Sbjct: 1 MKILVTGGAGFIGSAVVRLAVARGHQVVNLDALTYAACLDNVADVADSPNYAFEQVDIRD 60
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ L F RH P + A+ + + N +++ + +
Sbjct: 61 RAALDTVFARHRPDVVMHLAAESHVDRSIDGPGDFIETNITGTYQMLEAARKYWAEAGRP 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPL--RVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + + Y + + L A +
Sbjct: 121 EAFRFHHISTDEVYGSLSADPSVMFTEETGYDPRSPYSASKAASDHLVRAWGETYGLPVV 180
Query: 178 VLYFFSLPLPAKISAAFL 195
+ + P +
Sbjct: 181 LTNCSNNYGPYHFPEKLI 198
>gi|302540668|ref|ZP_07293010.1| DNA polymerase IV (Pol IV) [Streptomyces hygroscopicus ATCC 53653]
gi|302458286|gb|EFL21379.1| DNA polymerase IV (Pol IV) [Streptomyces himastatinicus ATCC 53653]
Length = 508
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 197 LSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230
+ A A+ + V E L++LL
Sbjct: 198 VGPATAEALRRVGIHTVAETREAGEAELVRLLGR 231
>gi|70938293|ref|XP_739840.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56517132|emb|CAH75249.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 249
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 6/139 (4%)
Query: 92 IFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQ 151
F + N+ A I + P ++ K + + I+CY ++
Sbjct: 38 YFQKQKNNSIDAVWIASAISRANFEDPEMWGAEKEEEKDSNYGNKANHANVTRINCYDTK 97
Query: 152 DIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKN 211
I Y + + I + S+VL F+ +C+ + + +
Sbjct: 98 AINYSKKKINE----NSIICLMSNSAVLSFYQNFGNKFN--YVICMGKSCYTLLKKLNFI 151
Query: 212 VVTVACFPKETSLLKLLPL 230
V K LL +L
Sbjct: 152 NVYYPANSKLELLLNMLVK 170
>gi|47566913|ref|ZP_00237631.1| siroheme synthase [Bacillus cereus G9241]
gi|47556542|gb|EAL14875.1| siroheme synthase [Bacillus cereus G9241]
Length = 474
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++K+Q+ G +P + + + + S+ES+
Sbjct: 253 KVLFTSATNKTSVIKQKLQEAGAEIYQIPTFKKVEYTLTFEQINEIFNIDRLVFCSAESV 312
Query: 61 STLPANFCRHTP 72
L + +H
Sbjct: 313 EILMRSCSKHQK 324
>gi|296141104|ref|YP_003648347.1| DEAD/DEAH box helicase [Tsukamurella paurometabola DSM 20162]
gi|296029238|gb|ADG80008.1| DEAD/DEAH box helicase domain protein [Tsukamurella paurometabola
DSM 20162]
Length = 476
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 5/25 (20%), Positives = 11/25 (44%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIP 26
I+ TR +A + +++ G
Sbjct: 250 RILFTRTKHQAKKLAKQLTAQGIPA 274
>gi|298368754|ref|ZP_06980072.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Neisseria sp. oral
taxon 014 str. F0314]
gi|298282757|gb|EFI24244.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Neisseria sp. oral
taxon 014 str. F0314]
Length = 431
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 22/76 (28%), Gaps = 7/76 (9%)
Query: 14 RTQEKIQKMGYIPVMMP-LSYFIHDRESVFLAMQQSYG------AIAITSSESLSTLPAN 66
+++K+G + V P + A+ +Y ++ S + + +
Sbjct: 351 AMAAELRKLGAVVVEEPEAIRITPPEQLRTDAIIDTYDDHRIAMCFSLVSLMGVPVVIND 410
Query: 67 FCRHTPIFAIGEASAC 82
F +
Sbjct: 411 PKCTHKTFPTYFDTFA 426
>gi|302756877|ref|XP_002961862.1| hypothetical protein SELMODRAFT_403240 [Selaginella moellendorffii]
gi|300170521|gb|EFJ37122.1| hypothetical protein SELMODRAFT_403240 [Selaginella moellendorffii]
Length = 262
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 7/103 (6%)
Query: 119 LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSV 178
L +F L H + +D Y + + L DA++F + + V
Sbjct: 138 CGGLSEPDVVPNFVAALQRHGWDVERLDAYATSW-TGSASVTPLLAGAVDALVFTSTAEV 196
Query: 179 LYFFSLPLPAKISAA------FLCLSNNIASAIPASYKNVVTV 215
++ A + A +V V
Sbjct: 197 EGLLMALHAHHLTIASLWPCVLVAFGPVTARGAKRLGVDVDVV 239
>gi|320531823|ref|ZP_08032743.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135962|gb|EFW27990.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 449
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM 29
I+ TR A R K+ + G V +
Sbjct: 254 RILFTRTKHLARRLARKLVQAGIPAVEL 281
>gi|307717048|gb|ADN88577.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 36.3 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + ++V YFF + P ++ + + N V + LK
Sbjct: 19 WLFLTSANAVEYFF-MNQPGEVHYKIAVIGEKTREKLAEYGYNPSFVPSIYQSEMFLK 75
>gi|170701257|ref|ZP_02892225.1| protein of unknown function DUF513 hemX [Burkholderia ambifaria
IOP40-10]
gi|170133850|gb|EDT02210.1| protein of unknown function DUF513 hemX [Burkholderia ambifaria
IOP40-10]
Length = 474
Score = 36.3 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 18/69 (26%), Gaps = 9/69 (13%)
Query: 167 ADAILFYARSSVLYFFSLPL--------PAKISAAFLCLSNNIASAIPASYKNVVTVACF 218
A L + V L A A + I A + +T+
Sbjct: 20 PHAWLVTSSEGVRNLHELARTHLNDAEIEALKHAPLVTPHPRIEQTARALGFDRITLT-G 78
Query: 219 PKETSLLKL 227
+ +++
Sbjct: 79 AGDERIVRA 87
>gi|269796644|ref|YP_003316099.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542]
gi|269098829|gb|ACZ23265.1| DNA/RNA helicase, superfamily II [Sanguibacter keddieii DSM 10542]
Length = 512
Score = 36.3 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 5/28 (17%), Positives = 13/28 (46%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM 29
++ TR +A + +++ G V +
Sbjct: 256 RVLFTRTKHQAKKLAKQLTADGIPAVDL 283
>gi|159897845|ref|YP_001544092.1| anti-sigma-factor antagonist [Herpetosiphon aurantiacus ATCC 23779]
gi|159890884|gb|ABX03964.1| anti-sigma-factor antagonist [Herpetosiphon aurantiacus ATCC 23779]
Length = 284
Score = 36.3 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Query: 156 PETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTV 215
T+ L + + +L + + +SN IA I + T+
Sbjct: 201 NADTVILDLTGVPVVDTAVANYILQAINALKLLGTETIVVGISNEIAQTIVQLGIRLDTI 260
Query: 216 ACFPKETS-LLKLLPLR 231
A S L+ L +
Sbjct: 261 ATRADLQSGLMAALERQ 277
>gi|329948141|ref|ZP_08295013.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328522874|gb|EGF49979.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 525
Score = 36.3 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM 29
I+ TR A R K+ + G V +
Sbjct: 277 RILFTRTKHLARRLARKLVQAGIPAVEL 304
>gi|326772300|ref|ZP_08231585.1| ATP-dependent RNA helicase [Actinomyces viscosus C505]
gi|326638433|gb|EGE39334.1| ATP-dependent RNA helicase [Actinomyces viscosus C505]
Length = 540
Score = 36.3 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM 29
I+ TR A R K+ + G V +
Sbjct: 267 RILFTRTKHLARRLARKLVQAGIPAVEL 294
>gi|307717076|gb|ADN88591.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
gi|307717084|gb|ADN88595.1| uroporphyrinogen-III synthase [Listeria monocytogenes]
Length = 165
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 169 AILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
+ + ++V YFF + P + + + N V + LK
Sbjct: 19 WLFLTSANAVEYFF-MNQPGAVHYKIAVIGEKTREKLAEYGYNPSFVPSIYQSEMFLK 75
>gi|300118144|ref|ZP_07055892.1| bifunctional uroporphyrinogen-III
methyltransferase/uroporphyrinogen-III synthase
[Bacillus cereus SJ1]
gi|298724455|gb|EFI65149.1| bifunctional uroporphyrinogen-III
methyltransferase/uroporphyrinogen-III synthase
[Bacillus cereus SJ1]
Length = 474
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + + + + S+ES+
Sbjct: 253 KVLFTSATNKTSVMKQRLQEAGAEIYQIPTFKKEEYTLTLEQINEIFNVDRLVFCSAESV 312
Query: 61 STLPANFCRHTP 72
L + ++
Sbjct: 313 EILMQSCSKYQK 324
>gi|228985261|ref|ZP_04145425.1| Uroporphyrinogen-III C-methyltransferase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774461|gb|EEM22863.1| Uroporphyrinogen-III C-methyltransferase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 474
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + + + + S+ES+
Sbjct: 253 KVLFTSATNKTSVMKQRLQEAGAEIYQIPTFKKEEYTLTLEQINEIFNVDRLVFCSAESV 312
Query: 61 STLPANFCRHTP 72
L + ++
Sbjct: 313 EILMQSCSKYQK 324
>gi|229196397|ref|ZP_04323145.1| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus m1293]
gi|228587251|gb|EEK45321.1| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus m1293]
Length = 474
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + + + + S+ES+
Sbjct: 253 KVLFTSATNKTSVMKQRLQEAGAEIYQIPTFKKEEYTLTLEQINEIFNVDRLVFCSAESV 312
Query: 61 STLPANFCRHTP 72
L + ++
Sbjct: 313 EILMQSCSKYQK 324
>gi|222095779|ref|YP_002529836.1| bifunctional uroporphyrinogen-iii
methyltransferase/uroporphyrinogen-iii synthase
[Bacillus cereus Q1]
gi|221239837|gb|ACM12547.1| uroporphiryn-III C-methyltransferase [Bacillus cereus Q1]
Length = 474
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + + + + S+ES+
Sbjct: 253 KVLFTSATNKTSVMKQRLQEAGAEIYQIPTFKKEEYTLTLEQINEIFNVDRLVFCSAESV 312
Query: 61 STLPANFCRHTP 72
L + ++
Sbjct: 313 EILMQSCSKYQK 324
>gi|196046015|ref|ZP_03113243.1| putative uroporphyrin-III C-methyltransferase [Bacillus cereus
03BB108]
gi|196023070|gb|EDX61749.1| putative uroporphyrin-III C-methyltransferase [Bacillus cereus
03BB108]
Length = 474
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + + + + S+ES+
Sbjct: 253 KVLFTSATNKTSVMKQRLQEAGAEIYQIPTFKKEEYTLTLEQINEIFNVDRLVFCSAESV 312
Query: 61 STLPANFCRHTP 72
L + ++
Sbjct: 313 EILMQSCSKYQK 324
>gi|206975090|ref|ZP_03236004.1| putative uroporphyrin-III C-methyltransferase [Bacillus cereus
H3081.97]
gi|217959692|ref|YP_002338244.1| bifunctional uroporphyrinogen-III
methyltransferase/uroporphyrinogen-III synthase
[Bacillus cereus AH187]
gi|229138885|ref|ZP_04267465.1| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus
BDRD-ST26]
gi|206746511|gb|EDZ57904.1| putative uroporphyrin-III C-methyltransferase [Bacillus cereus
H3081.97]
gi|217067570|gb|ACJ81820.1| putative uroporphyrin-III C-methyltransferase [Bacillus cereus
AH187]
gi|228644616|gb|EEL00868.1| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus
BDRD-ST26]
Length = 474
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + + + + S+ES+
Sbjct: 253 KVLFTSATNKTSVMKQRLQEAGAEIYQIPTFKKEEYTLTLEQINEIFNVDRLVFCSAESV 312
Query: 61 STLPANFCRHTP 72
L + ++
Sbjct: 313 EILMQSCSKYQK 324
>gi|117620279|ref|YP_855426.1| glycosyl transferase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117561686|gb|ABK38634.1| glycosyl transferase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 369
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 57/222 (25%), Gaps = 26/222 (11%)
Query: 1 MYIV----------ITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYG 50
M I+ I+R ++ G L +A Y
Sbjct: 1 MRILFGVQGTGNGHISRSR----TLARALRARGLEVDY--LFSGRPADGYFEMAEFGDYR 54
Query: 51 A---IAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIV 107
A I S E + +P+ L + I + S + A+
Sbjct: 55 AFPGITFVSHEGAISGWRTLKGLSPLR-FWRDMRALDCRDYDLVISDFEPISAHAARRWG 113
Query: 108 EQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLR-----VIDCYYSQDIAYPETTMKN 162
+ + + Q + + F L+ H P+R + + +
Sbjct: 114 KPSLTISHQASFDWPIPRWGESGFNRQLMHHFAPVRQALGLHWFHFGQPLLPPIIDAIPP 173
Query: 163 LLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASA 204
N +++ +L F+C I +A
Sbjct: 174 APDNQQILVYLPFEQTEAIAALLSRFNQQ-RFVCFHPAIRNA 214
>gi|58198717|gb|AAW65998.1| uroporphyrinogen III methyltransferase [Bacillus thuringiensis]
Length = 474
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + + + + S+ES+
Sbjct: 253 KVLFTSATNKTSVMKQRLQEAGAEIYQIPTFKKEEYTLTLEQINEIFNVDRLVFCSAESV 312
Query: 61 STLPANFCRHTP 72
L + ++
Sbjct: 313 EILMQSCSKYQK 324
>gi|52143291|ref|YP_083539.1| bifunctional uroporphyrinogen-III
methyltransferase/uroporphyrinogen-III synthase
[Bacillus cereus E33L]
gi|51976760|gb|AAU18310.1| uroporphiryn-III C-methyltransferase [Bacillus cereus E33L]
Length = 474
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + + + + S+ES+
Sbjct: 253 KVLFTSATNKTSVMKQRLQEAGAEIYQIPTFKKEEYTLTLEQINEIFNVDRLVFCSAESV 312
Query: 61 STLPANFCRHTP 72
L + ++
Sbjct: 313 EILMQSCSKYQK 324
>gi|228914761|ref|ZP_04078370.1| Uroporphyrinogen-III C-methyltransferase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228845080|gb|EEM90122.1| Uroporphyrinogen-III C-methyltransferase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 474
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 20/217 (9%), Positives = 59/217 (27%), Gaps = 16/217 (7%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESL 60
++ T K ++++Q+ G +P + + + + S+ES+
Sbjct: 253 KVLFTSATNKTSVMKQRLQEAGAEIYQIPTFKKEEYTLTLEQINEIFNVDRLVFCSAESV 312
Query: 61 STLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLI 120
L + ++ Q + + ++ ++ + +
Sbjct: 313 EILMQSCSKYKKDIRSL--------QAELQHMNVATQEKLMQYGLLSKEAKFSSDT-TVY 363
Query: 121 YLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLY 180
R ++ + + + + L D+I+F R+S+
Sbjct: 364 LGRNINRIAFIQEKIGAGSYMMTHKYTIDHRFDEVHSRMLSEFL--WDSIVFEGRASIDT 421
Query: 181 FFSLPLPAK-ISAAFLCLSNN---IASAIPASYKNVV 213
F + + L S + +
Sbjct: 422 FLAEVKRLGFLDIVTLPFSYTDVPTLRYANKVGFHNI 458
>gi|14601439|ref|NP_147977.1| putative uroporphyrinogen-III synthase [Aeropyrum pernix K1]
gi|5105177|dbj|BAA80491.1| putative uroporphyrinogen-III synthase [Aeropyrum pernix K1]
Length = 240
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 7/77 (9%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Query: 151 QDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPA-SY 209
+++ ++ L+ + + P + + + A + +
Sbjct: 39 REVEGWRNSLLRALRRCPVLGITSPRGAELLARAPEVLEAAERVYAVGPQTARVLVEMAG 98
Query: 210 KNVVTVACFPKETSLLK 226
V + +S+LK
Sbjct: 99 VKPVVPSSGYSVSSMLK 115
>gi|325067377|ref|ZP_08126050.1| ATP-dependent RNA helicase [Actinomyces oris K20]
Length = 370
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM 29
I+ TR A R K+ + G V +
Sbjct: 197 RILFTRTKHLARRLARKLVQAGIPAVEL 224
>gi|88855281|ref|ZP_01129945.1| oxidoreductase [marine actinobacterium PHSC20C1]
gi|88815188|gb|EAR25046.1| oxidoreductase [marine actinobacterium PHSC20C1]
Length = 257
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 6/31 (19%), Positives = 10/31 (32%)
Query: 197 LSNNIASAIPASYKNVVTVACFPKETSLLKL 227
+ A +VV VA ++L
Sbjct: 15 IGEATARRFAKHGWSVVAVARRADRLAVLAA 45
>gi|89898590|ref|YP_515700.1| uroporphyrinogen-III synthase [Chlamydophila felis Fe/C-56]
gi|89331962|dbj|BAE81555.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
Length = 214
Score = 35.9 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 16/199 (8%), Positives = 45/199 (22%), Gaps = 18/199 (9%)
Query: 21 KMGYIPVMMPLSYFIHDRESVFLAM-----QQSYGAIAITSSESLSTLPANFCRHT---- 71
Y + P+ + S + I +TS S S + +
Sbjct: 12 ARKYRALFAPILEIVPFARSSPQLRHAYLYLEKTSHILLTSPSSTSLFFSRMKKKFSRKT 71
Query: 72 ---PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN 128
+ + + + + ++ + ++Y
Sbjct: 72 LRNKHYLCLGKITAHRLARCLPKAPYSLAATETGEGVL-PMISSLPKEARILYPHSALSR 130
Query: 129 FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPA 188
+++L + Y ++ + + ++ + S V + L
Sbjct: 131 PIIKNFLTQENRYFFAYPHYSIRERRLSPQ----IFDHCTRVILTSPSGVRAYAKLFPVL 186
Query: 189 KISAAFLCLSNNIASAIPA 207
F C
Sbjct: 187 PDRQHF-CQGPITLKEFQK 204
>gi|119472806|ref|XP_001258422.1| uroporphyrinogen-III synthase (UroS), putative [Neosartorya
fischeri NRRL 181]
gi|119406574|gb|EAW16525.1| uroporphyrinogen-III synthase (UroS), putative [Neosartorya
fischeri NRRL 181]
Length = 344
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 4/43 (9%), Positives = 9/43 (20%), Gaps = 4/43 (9%)
Query: 194 FLCLSNNIASAI-PASYKNVVTVACFPKETSL---LKLLPLRR 232
+ + A P + ++ RR
Sbjct: 299 IATIGPTTRDHLVKNYGFQPDVSAEKPSPEGVGAGIEAFMRRR 341
>gi|70992619|ref|XP_751158.1| uroporphyrinogen-III synthase (UroS) [Aspergillus fumigatus Af293]
gi|66848791|gb|EAL89120.1| uroporphyrinogen-III synthase (UroS), putative [Aspergillus
fumigatus Af293]
gi|159124729|gb|EDP49847.1| uroporphyrinogen-III synthase (UroS), putative [Aspergillus
fumigatus A1163]
Length = 341
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 3/42 (7%), Positives = 8/42 (19%), Gaps = 4/42 (9%)
Query: 194 FLCLSNNIASAI-PASYKNVVTVACFPKETSL---LKLLPLR 231
+ + A P + ++ R
Sbjct: 296 IATIGPTTRDHLVKNYGFQPDVCAEKPSPEGVGAGIEAFLRR 337
>gi|260881370|ref|ZP_05404229.2| glycosyl hydrolase domain protein [Mitsuokella multacida DSM 20544]
gi|260849219|gb|EEX69226.1| glycosyl hydrolase domain protein [Mitsuokella multacida DSM 20544]
Length = 381
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 5 ITRPIKKALRTQEKIQKMGYIPVMMPL 31
+TR + A +T EK++K+G+ P+
Sbjct: 154 VTRAEESARQTAEKLKKLGFNVNFAPV 180
>gi|92109616|ref|YP_571903.1| hypothetical protein Nham_4489 [Nitrobacter hamburgensis X14]
gi|91802698|gb|ABE65071.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 307
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 19/229 (8%), Positives = 46/229 (20%), Gaps = 18/229 (7%)
Query: 13 LRTQEKIQKMGYIPVMMPLS---YFIHDRESVFLAMQQ-----SYGAIAITSSESLSTLP 64
T +++ G ++ P Q + + +
Sbjct: 57 SETISRLKVAGLQVLLRPTLLKEAVRSLSLKALYLPDQKRILIDKDLPKLKHRWNEAHEV 116
Query: 65 ANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGG 124
+ + + + + + + E+
Sbjct: 117 GHDIIPWHEGMMLGDTEQTLTPTCHAIMEAEANYAAGQLLFLAERFRSDACDSEPSLGHI 176
Query: 125 KPRNFHFEDYLI-------EHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ + F + + E R + + + N + +
Sbjct: 177 RQLSERFGNTMTSTLWRFIEQGHRGRPMVALVTGHPHQIKRKADFDPANPCRYCVQSPAF 236
Query: 178 VLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLK 226
V F L + S A V +A E L K
Sbjct: 237 VQRFGGLGEVDLFR---VVTSYAGAQRGGGLGAKEVILADASDERHLFK 282
>gi|269795054|ref|YP_003314509.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542]
gi|269097239|gb|ACZ21675.1| DNA/RNA helicase, superfamily II [Sanguibacter keddieii DSM 10542]
Length = 456
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 5/28 (17%), Positives = 12/28 (42%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM 29
++ TR +A + + + G V +
Sbjct: 247 RVLFTRTRLQAKKLAKILTAQGIPAVEL 274
>gi|218245204|ref|YP_002370575.1| ferrochelatase [Cyanothece sp. PCC 8801]
gi|257058235|ref|YP_003136123.1| ferrochelatase [Cyanothece sp. PCC 8802]
gi|226740919|sp|B7K399|HEMH_CYAP8 RecName: Full=Ferrochelatase; AltName: Full=Heme synthase; AltName:
Full=Protoheme ferro-lyase
gi|218165682|gb|ACK64419.1| Ferrochelatase [Cyanothece sp. PCC 8801]
gi|256588401|gb|ACU99287.1| ferrochelatase [Cyanothece sp. PCC 8802]
Length = 387
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 18/232 (7%), Positives = 51/232 (21%), Gaps = 26/232 (11%)
Query: 8 PIKKALRTQEKIQKMGYIP-------VMMPLSY-----FIHDRESVFLAMQQSYGAIAIT 55
+A ++++ ++G+ P + DR + + T
Sbjct: 74 TEAQAEALEQRLAEIGHTAQIYIGMRYWHPFTEEAIARIKRDRLKNLVILPLYPQFSIST 133
Query: 56 SSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTP 115
S S L + + + +A +I ++
Sbjct: 134 SGSSFRVLEEMWNADPQL--------KAINYTLIPSWYDDPRYLAAMADLIAQELDKCEE 185
Query: 116 QKPLIYLGGKPRNF--HFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ + ++ ++ + Q + P + +
Sbjct: 186 PNRVHIFFSAHGVPQSYVDEAGDPYQAEIEACTRLIMQTLNRPNDYTLAYQSRVGPVEWL 245
Query: 174 ARSSVLYFFSLPLPAKISAAFLCL---SNNIASAIPASYKNVVTVACFPKET 222
+ L + + S +I + VA
Sbjct: 246 KPYTEDALKELGEQGVQDLLVVPISFVSEHI-ETLQEIDIEYREVAEEAGIE 296
>gi|329848962|ref|ZP_08263990.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis biprosthecum C19]
gi|328844025|gb|EGF93594.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis biprosthecum C19]
Length = 293
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Query: 1 MYIVITRPIKKALRTQEKI-QKMGYIPVM--MPLSYFIHDRESVFLAMQQSYGAIAITSS 57
M ++IT + + + + +++G + +P S I +++
Sbjct: 1 MRVLITGTEGQVDTSVKALGEQLGIEVIRIGLPDIDLSRPDSLEAPVRAASPDVIISSAA 60
Query: 58 ESL 60
+
Sbjct: 61 YTA 63
>gi|167957270|ref|ZP_02544344.1| glycosyl transferase, group 1 [candidate division TM7 single-cell
isolate TM7c]
Length = 380
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 13/196 (6%), Positives = 33/196 (16%), Gaps = 13/196 (6%)
Query: 29 MPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKG 88
+PL + Y I +S + +
Sbjct: 68 LPLLR----QWWFARLDLSQYDIILSSSGNGEAKFAHKSRPEQLHICYCHTPTHFYWRHY 123
Query: 89 FTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCY 148
I LA++ ++ V ++ +
Sbjct: 124 DEYIKRPSFRPRWLARLGLKVLVRPLKKRDFAAAQQVDVFIANSTGIQADIAEFYQKKST 183
Query: 149 YSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPAS 208
+ + + + ++ A A
Sbjct: 184 VIFPPIDLSNFSPLAKTRQKKSIPKKPRCL-VWGRIVPMKRLDVAI--------EACQKL 234
Query: 209 YKNVVTVACFPKETSL 224
+ + P L
Sbjct: 235 GWQLDIIGKGPDMDRL 250
>gi|212636620|ref|YP_002313145.1| 4Fe-4S cluster binding protein [Shewanella piezotolerans WP3]
gi|212558104|gb|ACJ30558.1| 4Fe-4S cluster binding [Shewanella piezotolerans WP3]
Length = 394
Score = 35.9 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 20/224 (8%), Positives = 50/224 (22%), Gaps = 24/224 (10%)
Query: 18 KIQKMGYI-------PVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRH 70
+++ +G+ P+ + L + + S
Sbjct: 140 ELKTLGFSQPNSRPFVDSAPILE-RPLADKAGLGWTGKHSLLL-NSDAGSWFFLGELFID 197
Query: 71 TPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFH 130
P+ A IVE ++ ++ + YL + +
Sbjct: 198 LPLPVDVPVKA--------DCNTCVACIKSCPTNAIVEPYIVDG-RRCISYLTIELQGAI 248
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI 190
++ + D + + N + F
Sbjct: 249 PTEFRQAIGNRIYGCDDCQLVCPVNSQAPITNEQDFHTRGPLQQPELLTLFAWSEAEFLK 308
Query: 191 SAAFLCLSNNIASAIPASYKNVVTVA--CFPKETSLLKLLPLRR 232
+ I + + +A P S++ L R+
Sbjct: 309 LTE----GSAIRRIGHKRWLRNIAIALGNAPTNASIIAALESRK 348
>gi|296129952|ref|YP_003637202.1| flavodoxin-like protein [Cellulomonas flavigena DSM 20109]
gi|296021767|gb|ADG75003.1| flavodoxin-like protein [Cellulomonas flavigena DSM 20109]
Length = 167
Score = 35.9 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 20/63 (31%), Gaps = 15/63 (23%)
Query: 1 MYIVIT---R---PIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAI 54
M +++T R + ++ G+ + E + Y A+ +
Sbjct: 1 MRVLVTVASRHGATREMGQEVAATLRAAGHEVDEV---------EPDEVEHVDPYDAVVM 51
Query: 55 TSS 57
S+
Sbjct: 52 GSA 54
>gi|206971980|ref|ZP_03232928.1| putative uroporphyrin-III C-methyltransferase [Bacillus cereus
AH1134]
gi|206732903|gb|EDZ50077.1| putative uroporphyrin-III C-methyltransferase [Bacillus cereus
AH1134]
Length = 474
Score = 35.6 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 50/175 (28%), Gaps = 12/175 (6%)
Query: 13 LRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
++K+Q+ G +P + + + + S+ES+ L + +H
Sbjct: 264 SSMKQKLQEAGAEIYQIPTFKKVEYTLTLEQINEIFNVNRLVFCSAESVEILMQSCSKHQ 323
Query: 72 PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHF 131
Q + + ++ +Q + +YLG F
Sbjct: 324 KDIRSL--------QAQLQHMNVATQEKLMQYGLLSKQAEFSSN--TTVYLGRNINRIAF 373
Query: 132 EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPL 186
I + + + M + + +F R+S+ F +
Sbjct: 374 IQEKIGAGSYMMTHEYTIDHRFDEIHSRMLSEFSWDNI-VFEGRASIDTFLAEIK 427
>gi|308172189|ref|YP_003918894.1| uroporphyrin-III C-methyltransferase [Bacillus amyloliquefaciens
DSM 7]
gi|307605053|emb|CBI41424.1| uroporphyrin-III C-methyltransferase [Bacillus amyloliquefaciens
DSM 7]
gi|328551996|gb|AEB22488.1| uroporphyrin-III C-methyltransferase [Bacillus amyloliquefaciens
TA208]
gi|328910261|gb|AEB61857.1| uroporphyrin-III C-methyltransferase [Bacillus amyloliquefaciens
LL3]
Length = 479
Score = 35.6 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 20/204 (9%), Positives = 52/204 (25%), Gaps = 13/204 (6%)
Query: 2 YI-VITRPIKKAL-RTQEKIQKMGYIPVMMPLSYFIHDRESV-FLAMQQSYGAIAITSSE 58
+I V+T A +K+++ G + P + L ++ I TS
Sbjct: 255 HIMVVT--HGDAEHTLTDKLREYGADVIEWPKRIIKKMPVNETILKQIGTFEHIFFTSRL 312
Query: 59 SLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKP 118
++ C A + + ++ E +
Sbjct: 313 AV-------CEFFDTLAFNQIDIRRVTANLNAATEAAQKELEKRGFLLSEYQSDSPHSLI 365
Query: 119 LIYLGGKPRNFHFE-DYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSS 177
+ E + + E+ ++ ++ + S+
Sbjct: 366 VGSRQAAVNMPDSESCPFYVTHEHIADERFTSMIERTISESPLQMIICPDKEAAQHLISA 425
Query: 178 VLYFFSLPLPAKISAAFLCLSNNI 201
P P+ +C+ ++
Sbjct: 426 GKEIGISPNPSANRPPVVCMGEDV 449
>gi|149177575|ref|ZP_01856177.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Planctomyces maris DSM 8797]
gi|148843555|gb|EDL57916.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Planctomyces maris DSM 8797]
Length = 276
Score = 35.6 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 20/240 (8%), Positives = 54/240 (22%), Gaps = 32/240 (13%)
Query: 12 ALRTQEKIQKMGYIPVMMPLSYFIHDRESV------FLAMQQSYGAIAITSSESLSTLPA 65
+ I++ P ++ I ++ + I + + L
Sbjct: 16 SDAMTSLIERNQGNPTLVHSMDEIPLEDNAQVKSFCEKLFRGEIDVIVFMTGVGATALLN 75
Query: 66 NFCRHTPIFAIGEASACLAR-----------QKGFTQIFHGKDNSINLAKII--VEQKVL 112
+ P + A + + I + +II ++ K
Sbjct: 76 AAELYFPREQVLAAFRKIIVVVRGPKPTVVLRNWEVPIHYSAPEPNTWHEIISVLDDKKF 135
Query: 113 FTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE----TTMKNLLQNAD 168
K + F L + I Y + + +
Sbjct: 136 SVTGKHIAVQEYGKPVEEFYKALRNRGAQVLPIAVYRWALPDDTSGLRNAIHATIRGDYN 195
Query: 169 AILFYARSSVLYFFSLPLPAKIS---------AAFLCLSNNIASAIPASYKNVVTVACFP 219
++F + + + + ++ + A+ V + P
Sbjct: 196 VLMFTSAQQITHVLQIAEEEQVKEDWLLAASKTMIASVGPACTEALQEVGLPVDFESSPP 255
>gi|229178554|ref|ZP_04305919.1| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus 172560W]
gi|228604958|gb|EEK62414.1| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus 172560W]
Length = 474
Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 49/175 (28%), Gaps = 12/175 (6%)
Query: 13 LRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
++K+Q+ G +P + + + + S+ES+ L + +H
Sbjct: 264 SSMKQKLQEAGAEIYQIPTFKKVEYTLTLEQINEIFNVNRLVFCSAESVEILMQSCSKHQ 323
Query: 72 PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHF 131
Q + + ++ +Q + +YLG F
Sbjct: 324 KDIRSL--------QAQLQHMNVATQEKLMQYGLLSKQAEFSSN--TTVYLGRNINRIAF 373
Query: 132 EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPL 186
I + + + M + +F R+S+ F +
Sbjct: 374 IQEKIGAGSYMMTHEYTIDHRFDEIHSRMLSEFSWDSI-VFEGRASIDTFLAEIK 427
>gi|170720218|ref|YP_001747906.1| beta-lactamase domain-containing protein [Pseudomonas putida W619]
gi|169758221|gb|ACA71537.1| beta-lactamase domain protein [Pseudomonas putida W619]
Length = 291
Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 59/226 (26%), Gaps = 22/226 (9%)
Query: 9 IKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFC 68
+A + ++++ G + Y H + + A S + + A+
Sbjct: 62 KAQAEQLVQRLRA-GGK--HLTTIYISHGDPDYYFGLDTLTQAFPEASVVASAATVAHIR 118
Query: 69 RHTPIF-AIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPR 127
+ A + N + L +E L PQ+ ++
Sbjct: 119 QTMDAKLAYWGPQMGSDKPARLVVPQVLDGNRLMLEGQPLEVMGLDGPQRERSFV----- 173
Query: 128 NFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL--YFFSLP 185
+ + + + + L I + +V+ ++
Sbjct: 174 --WIPSIKAVVGGVVVSENIHVWMADTQSAKSHADWLGTLKHIEQLSPRTVVPGHYLGQS 231
Query: 186 LPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ + F AS I A V A L+ + R
Sbjct: 232 DHSLDAVHF------TASYIQAF---DVEAAKAKDADGLIAAMKKR 268
>gi|225691080|gb|ACO06225.1| leucine-rich repeat kinase 2 (predicted) [Dasypus novemcinctus]
Length = 2527
Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 52/215 (24%), Gaps = 13/215 (6%)
Query: 25 IPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLA 84
+PL H ++ I +P N + + G L
Sbjct: 1294 KIWDLPLDEL-HLNFDFKHIGYKAKDIIRFLQQRLKKAVPYNRMKLMIVGNTGSGKTTLL 1352
Query: 85 RQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRV 144
+Q T+ + + + + + + E++ H L
Sbjct: 1353 QQLMKTKKSDFGMQDATVGIDVKDWPIHIRGKGKKDLILNVWDFAGREEFYSTHPHFLTQ 1412
Query: 145 IDCYYSQDIAYPETTMKNLLQNADAILF-----YARSSVLYFFSLPLPAKISAAFLCLSN 199
Y + Y + + + LF + S V+ + + C+S
Sbjct: 1413 RALYLAV---YDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHLDASDEKQRKACISK 1469
Query: 200 NIASAIPASYKNVV--TVACFPKETSLLKLLPLRR 232
+ + E S L R
Sbjct: 1470 ITKELLNKRGFPAIRDYHFVNATEES--DALAKLR 1502
>gi|291520020|emb|CBK75241.1| O-acetylhomoserine sulfhydrolase [Butyrivibrio fibrisolvens 16/4]
Length = 341
Score = 35.6 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 23/88 (26%), Gaps = 7/88 (7%)
Query: 144 VIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKISAAFLCLSNN--- 200
L+ A + + FF+L + + + S+
Sbjct: 51 YFYTRLQNPTNDYVAAKIAALEGGTAAMLTSSGQAANFFALFNICEAGSHIVASSSIYGG 110
Query: 201 ----IASAIPASYKNVVTVACFPKETSL 224
IA + +V V+ E L
Sbjct: 111 TFNLIAVTMKKMGVDVTFVSPKATEEEL 138
>gi|170730367|ref|YP_001775800.1| uroporphyrinogen-III synthase [Xylella fastidiosa M12]
gi|167965160|gb|ACA12170.1| uroporphyrinogen-III synthase [Xylella fastidiosa M12]
Length = 260
Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Query: 171 LFYARSSVLYFFSL-PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+F + +V +L L +LC+ + A + V LL LL
Sbjct: 69 VFTSPEAVRAAHALQTLRTSPRQVWLCVGASTARVLQQCGITRVLHPTQMNSEGLLTLLA 128
Query: 230 LR 231
+
Sbjct: 129 QQ 130
>gi|220903416|ref|YP_002478728.1| stationary-phase survival protein SurE [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|254765151|sp|B8J2G2|SURE_DESDA RecName: Full=5'-nucleotidase surE; AltName: Full=Nucleoside
5'-monophosphate phosphohydrolase
gi|219867715|gb|ACL48050.1| stationary-phase survival protein SurE [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 257
Score = 35.2 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 19/181 (10%), Positives = 44/181 (24%), Gaps = 24/181 (13%)
Query: 1 MYIVIT-----RPIKKALRTQEKIQKMGYIP-VMMP----------LSYFIHDRESVFLA 44
M +++T R +++ G+ V+ P L+ F R +V
Sbjct: 1 MNVLLTNDDGIRAKG-LRALYAALREAGHTVYVVAPMSQQSGVGHSLTVFEPVRATVIEE 59
Query: 45 MQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAK 104
+ + T ++ + H P + +A + +
Sbjct: 60 PDFTGTGVYGTPTDCVKLALGRLLPHKPDLVMSGINAGANVGPDILYSGTVGAATEAAHE 119
Query: 105 IIVEQKVLFTPQKP-------LIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPE 157
+ V F L+ N + Y + + +
Sbjct: 120 ELPSMAVSFDSFSHNTAPDMDLMPQARHAVNLAERMNWSAVGRRRVININYPACPLDEAQ 179
Query: 158 T 158
Sbjct: 180 D 180
>gi|28198963|ref|NP_779277.1| uroporphyrinogen-III synthase [Xylella fastidiosa Temecula1]
gi|28057061|gb|AAO28926.1| uroporphyrinogen-III synthase [Xylella fastidiosa Temecula1]
gi|307580112|gb|ADN64081.1| uroporphyrinogen-III synthase [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 257
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Query: 171 LFYARSSVLYFFSL-PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+F + +V +L L +LC+ + A + V LL LL
Sbjct: 66 VFTSPEAVRAAHALQTLRTSPGQVWLCVGASTARVLQQCGITRVLHPTQMNSEGLLTLLA 125
Query: 230 LR 231
+
Sbjct: 126 QQ 127
>gi|320096271|ref|ZP_08027850.1| hypothetical protein HMPREF9005_2462 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319976792|gb|EFW08556.1| hypothetical protein HMPREF9005_2462 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 162
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 8/77 (10%), Positives = 21/77 (27%), Gaps = 15/77 (19%)
Query: 1 MYIVITRP------IKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAI 54
M+I++T + A ++ + G+ + Y A+ +
Sbjct: 1 MHILVTAASKHGATDEVADAIARRLTEAGFEVD-----RIAPGDVD----SVEEYDAVVV 51
Query: 55 TSSESLSTLPANFCRHT 71
S+ +
Sbjct: 52 GSAVYILQWMPAAHDFM 68
>gi|182681675|ref|YP_001829835.1| uroporphyrinogen-III synthase [Xylella fastidiosa M23]
gi|182631785|gb|ACB92561.1| Uroporphyrinogen III synthase HEM4 [Xylella fastidiosa M23]
Length = 260
Score = 35.2 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Query: 171 LFYARSSVLYFFSL-PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+F + +V +L L +LC+ + A + V LL LL
Sbjct: 69 VFTSPEAVRAAHALQTLRTSPGQVWLCVGASTARVLQQCGITRVLHPTQMNSEGLLTLLA 128
Query: 230 LR 231
+
Sbjct: 129 QQ 130
>gi|228952528|ref|ZP_04114605.1| Uroporphyrinogen-III C-methyltransferase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228807139|gb|EEM53681.1| Uroporphyrinogen-III C-methyltransferase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 474
Score = 35.2 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 20/175 (11%), Positives = 48/175 (27%), Gaps = 12/175 (6%)
Query: 13 LRTQEKIQKMGYIPVMMPLS-YFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHT 71
++K+Q+ G +P + + + + S+ES+ L + +H
Sbjct: 264 SSMKQKLQEAGAEIYQIPTFKKVEYTLTLEQINEIFNVNRLVFCSAESVEILMQSCSKHQ 323
Query: 72 PIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHF 131
Q + + ++ +Q + +YLG
Sbjct: 324 KDIRSL--------QAQLQHMNVATQEKLMQYGLLSKQAEFSSN--TTVYLGRNINRIAV 373
Query: 132 EDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPL 186
I + + + M + +F R+S+ F +
Sbjct: 374 IQEKIGAGSYMMTHEYTIDHRFDEIHSRMLSEFSWDSI-VFEGRASIDTFLAEIK 427
>gi|196229904|ref|ZP_03128768.1| Haloacid dehalogenase domain protein hydrolase [Chthoniobacter
flavus Ellin428]
gi|196226230|gb|EDY20736.1| Haloacid dehalogenase domain protein hydrolase [Chthoniobacter
flavus Ellin428]
Length = 283
Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 10 KKALRTQEKIQKMGYIPVMM-PLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPAN 66
A E+++++G P+++ E+ L + Q +G S ++
Sbjct: 141 HAARALLERLRELGIKPIVLSSTIEHRVREEAEALDLAQYFGEHIYGSPADPTSFSKM 198
>gi|190348573|gb|EDK41045.2| hypothetical protein PGUG_05143 [Meyerozyma guilliermondii ATCC
6260]
Length = 612
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 19/186 (10%), Positives = 47/186 (25%), Gaps = 5/186 (2%)
Query: 13 LRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTP 72
R + + G ++P + L+ + S +++ +
Sbjct: 397 SRFMSLLVRFGTTSTLVPTLDIDLVWHTHQLSPYFYFSWCLDNSKDNMVVDHDDKVEEGN 456
Query: 73 IFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVL--FTPQKPLIYLGGKPRNFH 130
+ E +A L R + + K+ F K H
Sbjct: 457 LNDWFERTAKLYRAEFKYDYCACFCWYCVCIRNHANSKLQTIFNSGKHKDETKAHTNLSH 516
Query: 131 FEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVLYFFSLPLPAKI 190
+ + + + + + L N + F + V P +
Sbjct: 517 ISTHNAIALPFSKAEERRRQVQQKFKDRYLPWTLDNHQKMFFESNLFV---VPPLNPIAL 573
Query: 191 SAAFLC 196
+ ++C
Sbjct: 574 TTKYVC 579
>gi|332670894|ref|YP_004453902.1| DEAD/DEAH box helicase domain-containing protein [Cellulomonas fimi
ATCC 484]
gi|332339932|gb|AEE46515.1| DEAD/DEAH box helicase domain protein [Cellulomonas fimi ATCC 484]
Length = 529
Score = 34.8 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 5/28 (17%), Positives = 13/28 (46%)
Query: 2 YIVITRPIKKALRTQEKIQKMGYIPVMM 29
++ TR +A + +++ G V +
Sbjct: 247 RVLFTRTKHQAKKLAKQLTADGIPSVDL 274
>gi|284992234|ref|YP_003410788.1| DEAD/DEAH box helicase domain-containing protein [Geodermatophilus
obscurus DSM 43160]
gi|284065479|gb|ADB76417.1| DEAD/DEAH box helicase domain protein [Geodermatophilus obscurus
DSM 43160]
Length = 474
Score = 34.8 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 5/27 (18%), Positives = 13/27 (48%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMM 29
++ TR +A + +++ G V +
Sbjct: 251 VLFTRTKHQAKKLAKQLTASGIPAVDL 277
>gi|311746633|ref|ZP_07720418.1| glycosyl transferase, group 1 family [Algoriphagus sp. PR1]
gi|126578296|gb|EAZ82460.1| glycosyl transferase, group 1 family [Algoriphagus sp. PR1]
Length = 360
Score = 34.8 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 7/40 (17%)
Query: 1 MYI--VITRPIKKALR-----TQEKIQKMGYIPVMMPLSY 33
M I +ITRP ++ E ++ G+ ++ L
Sbjct: 1 MRIIQLITRPQRRGAEIFAVQLAECLKIRGHELWVISLLE 40
>gi|15838399|ref|NP_299087.1| uroporphyrinogen-III synthase [Xylella fastidiosa 9a5c]
gi|9106876|gb|AAF84607.1|AE004001_12 uroporphyrinogen-III synthase [Xylella fastidiosa 9a5c]
Length = 305
Score = 34.8 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 171 LFYARSSVLYFFSL-PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+F + +V +L L A +LC+ + A + V LL LL
Sbjct: 114 VFTSPEAVRAAHALQTLRASPGQVWLCVGASTARMLQQCGITRVLHPTQMNSEGLLTLLA 173
Query: 230 LR 231
+
Sbjct: 174 QQ 175
>gi|87312163|ref|ZP_01094267.1| hypothetical protein DSM3645_25136 [Blastopirellula marina DSM
3645]
gi|87285137|gb|EAQ77067.1| hypothetical protein DSM3645_25136 [Blastopirellula marina DSM
3645]
Length = 585
Score = 34.8 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 8/55 (14%), Positives = 18/55 (32%), Gaps = 5/55 (9%)
Query: 3 IVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSS 57
++ TRP K + + + + + + +Q AI I +
Sbjct: 7 VLYTRPEKDSSQLAKAFEAADFDV-----LAIHDSESLYRIVNRQQIDAIVIENK 56
>gi|71898564|ref|ZP_00680735.1| Uroporphyrinogen III synthase HEM4 [Xylella fastidiosa Ann-1]
gi|71731688|gb|EAO33748.1| Uroporphyrinogen III synthase HEM4 [Xylella fastidiosa Ann-1]
Length = 305
Score = 34.8 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Query: 171 LFYARSSVLYFFSL-PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+F + +V +L L +LC+ + A + V LL LL
Sbjct: 114 VFTSPEAVRAAHALQTLRTSPGQVWLCVGASTARVLQQCGITRVLHPTQMNSEGLLTLLA 173
Query: 230 LR 231
+
Sbjct: 174 QQ 175
>gi|21224512|ref|NP_630291.1| transferase [Streptomyces coelicolor A3(2)]
gi|4455733|emb|CAB36596.1| putative transferase [Streptomyces coelicolor A3(2)]
Length = 566
Score = 34.8 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 21/238 (8%), Positives = 55/238 (23%), Gaps = 40/238 (16%)
Query: 2 YIVITRPIKKALRTQE--KIQKM-----GYI-PVMMPLSYFIHDRESVFLAMQQSYGAIA 53
+++ R + ++ + G+ + P + +
Sbjct: 246 RVLVLRALGLGDLLAAVPALRALRRAYPGHELVLAAPA-ELAPVAAATGAVDR------V 298
Query: 54 ITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLF 113
+ ++ +P P + G H + + +++
Sbjct: 299 LPAAAPGRAVPHALDWTGPPPDV------AVDLHGNGPPSHRLLSRLGPRRLLAFAHPGT 352
Query: 114 TPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFY 173
+ + + L + I D + A A++ +
Sbjct: 353 PEVDGPPWYAEEHERERWCRLLRGYGIDADARDLRLPRPDAPSPAP--------GAVVLH 404
Query: 174 ARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPLR 231
+ + +A A+ A V V E L+ L R
Sbjct: 405 PGAGAPARCWPVERYAV----------VAEALRARG-RRVVVTGGADEADLVARLAKR 451
>gi|83950201|ref|ZP_00958934.1| dTDP-glucose 4,6-dehydratase [Roseovarius nubinhibens ISM]
gi|83838100|gb|EAP77396.1| dTDP-glucose 4,6-dehydratase [Roseovarius nubinhibens ISM]
Length = 349
Score = 34.8 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 17/196 (8%), Positives = 44/196 (22%), Gaps = 1/196 (0%)
Query: 1 MYIVITRPIKK-ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M I++T + G+ + + + ++V Q
Sbjct: 1 MRILVTGGAGFIGSAVVRRAVAQGHEVINLDALTYAACLDNVAEVAQSPNYRFEHVDIRD 60
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
+ L F H P + A+ + + N ++ + + Q
Sbjct: 61 RAALERVFRDHKPEAVMHLAAESHVDRSIDGPAEFVETNVTGTCNMLEAARGHWERQGRP 120
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADAILFYARSSVL 179
+ + + Y + + L A + +
Sbjct: 121 EGFRFHHISTDEVFGSLGDEGLFTEDTPYDPRSPYSASKAASDHLVRAWHETYGLPIVMT 180
Query: 180 YFFSLPLPAKISAAFL 195
+ P +
Sbjct: 181 NCSNNYGPYHFPEKLV 196
>gi|71275392|ref|ZP_00651678.1| Uroporphyrinogen III synthase HEM4 [Xylella fastidiosa Dixon]
gi|71163692|gb|EAO13408.1| Uroporphyrinogen III synthase HEM4 [Xylella fastidiosa Dixon]
Length = 305
Score = 34.8 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Query: 171 LFYARSSVLYFFSL-PLPAKISAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLP 229
+F + +V +L L +LC+ + A + V LL LL
Sbjct: 114 VFTSPEAVRAAHALQTLRTSPGQVWLCVGASTARVLQQCGITRVLHPTQMNSEGLLTLLA 173
Query: 230 LR 231
+
Sbjct: 174 QQ 175
>gi|291392427|ref|XP_002712738.1| PREDICTED: leucine-rich repeat kinase 2-like [Oryctolagus cuniculus]
Length = 2508
Score = 34.8 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 44/190 (23%), Gaps = 12/190 (6%)
Query: 50 GAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQ 109
I +P N + + G L +Q + + + +
Sbjct: 1295 DIIRFLQQRLRKAVPYNRMKLMIVGNTGSGKTTLLQQLMRAKKADVGMQGATVGIDVRDW 1354
Query: 110 KVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQNADA 169
V + + E++ H + Y + Y + + +
Sbjct: 1355 PVQIRSKGKRDLVLNVWDFAGREEFYSTHPHFMTQRALYLAV---YDLSKGQAEVDAMKP 1411
Query: 170 ILF-----YARSSVLYFFSLPLPAKISAAFLCLSNNIASAIPASYKNVV--TVACFPKET 222
LF + S V+ + + C+ + + E
Sbjct: 1412 WLFNIKARASSSPVILVGTHLDVSDEKQRKACIGKITRELLNKRGFPAIRDYHFVNATEE 1471
Query: 223 SLLKLLPLRR 232
S L R
Sbjct: 1472 S--DALAKLR 1479
>gi|119718380|ref|YP_925345.1| UDP-galactose 4-epimerase [Nocardioides sp. JS614]
gi|119539041|gb|ABL83658.1| UDP-galactose 4-epimerase [Nocardioides sp. JS614]
Length = 334
Score = 34.8 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 13/154 (8%), Positives = 39/154 (25%), Gaps = 9/154 (5%)
Query: 1 MYIVITRPIKK-ALRTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSES 59
M +++T T + +++ G+ PV++ + + I +
Sbjct: 1 MKVLVTGGAGYIGSTTAKALEEAGHTPVIL--------DSLLTGPLAFVRDRIFYEGDIA 52
Query: 60 LSTLPANFCRHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPL 119
L P A + + + + ++ + +
Sbjct: 53 DRALVRRVFDEHPDIDATIHMAARIVVPESVEKPYEYYRDNVAKSLELFDELNTLGKGRV 112
Query: 120 IYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDI 153
++ +D+ + L Y
Sbjct: 113 LFSSSASIYALKDDFEVSEGDRLEPASPYARTKR 146
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.122 0.315
Lambda K H
0.267 0.0375 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,507,725,072
Number of Sequences: 14124377
Number of extensions: 60614218
Number of successful extensions: 436882
Number of sequences better than 10.0: 2548
Number of HSP's better than 10.0 without gapping: 1963
Number of HSP's successfully gapped in prelim test: 585
Number of HSP's that attempted gapping in prelim test: 429233
Number of HSP's gapped (non-prelim): 3402
length of query: 232
length of database: 4,842,793,630
effective HSP length: 134
effective length of query: 98
effective length of database: 2,950,127,112
effective search space: 289112456976
effective search space used: 289112456976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 78 (34.8 bits)