HHsearch alignment for GI: 255764511 and conserved domain: COG0144

>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].

Probab=97.02  E-value=0.0055  Score=39.94  Aligned_cols=87  Identities=21%  Similarity=0.380  Sum_probs=68.7

Q ss_pred             HHHCCCCCCEEEECCCCCCHHHHHHHHHC----CEEEEECCCHHHHHHHHHHHHHCCC-CEEEECCCHHHHHHHHHHC-C
Q ss_conf             66083888889983768828899999748----9099980998999999998521488-5277113278898765312-3
Q gi|255764511|r   30 ALLNPAPGKVILDATFGAGGYSRSFCKMG----SNVIALDRDPFAVSCGQETMRDYKE-QFSLFQATFSQLQDYVPDK-G  103 (341)
Q Consensus        30 ~~l~~~~~g~~iD~TlG~GGHS~~iL~~~----~~liaiDrD~~ai~~a~~~l~~~~~-r~~~~~~~F~~i~~~l~~~-~  103 (341)
T Consensus       150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~~~~~~~  229 (355)
T COG0144         150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLPGGEK  229 (355)
T ss_pred             HHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf             97199997968880799976999999966899876997449878999999999971998348995133014311345577


Q ss_pred             CCEEEEECCCHHH
Q ss_conf             3247862252078
Q gi|255764511|r  104 VDGVVFDLGVSSM  116 (341)
Q Consensus       104 vdgIl~DLGvSS~  116 (341)
T Consensus       230 fD~iLlDaPCSg~  242 (355)
T COG0144         230 FDRILLDAPCSGT  242 (355)
T ss_pred             CCEEEECCCCCCC
T ss_conf             7859987999877