HHsearch alignment for GI: 255764511 and conserved domain: COG2264
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis].
Probab=95.38 E-value=0.1 Score=31.68 Aligned_cols=93 Identities=28% Similarity=0.344 Sum_probs=54.9
Q ss_pred CCCCCC-CCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCC-EEEEECCCHHHHHHHHHHHHHCCCCEEE-ECCCH
Q ss_conf 607833-40098688660838888899837688288999997489-0999809989999999985214885277-11327
Q gi|255764511|r 16 TIGDHV-PVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGS-NVIALDRDPFAVSCGQETMRDYKEQFSL-FQATF 92 (341)
Q Consensus 16 ~~~~H~-PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~-~liaiDrD~~ai~~a~~~l~~~~~r~~~-~~~~F 92 (341)
T Consensus 142 GTG~HpTT~lcL~~Le~~-~~~g~~vlDvGcGSGILaIAa~kLGA~~v~g~DiDp~AV~aa~eNa~~N--~v~~~~~~~~ 218 (300)
T COG2264 142 GTGTHPTTSLCLEALEKL-LKKGKTVLDVGCGSGILAIAAAKLGAKKVVGVDIDPQAVEAARENARLN--GVELLVQAKG 218 (300)
T ss_pred CCCCCHHHHHHHHHHHHH-HCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHC--CCCHHHHCCC
T ss_conf 788780179999999986-0589879982678159999999819866899718889999999999976--9960220034
Q ss_pred HHHHHHHHHCCCCEEEEEC
Q ss_conf 8898765312332478622
Q gi|255764511|r 93 SQLQDYVPDKGVDGVVFDL 111 (341)
Q Consensus 93 ~~i~~~l~~~~vdgIl~DL 111 (341)
T Consensus 219 ~~~~~~~~~~~~DvIVANI 237 (300)
T COG2264 219 FLLLEVPENGPFDVIVANI 237 (300)
T ss_pred CCCHHHCCCCCCCEEEEHH
T ss_conf 5630001368656898605