HHsearch alignment for GI: 255764511 and conserved domain: PRK11088
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional.
Probab=92.75 E-value=0.78 Score=26.06 Aligned_cols=73 Identities=23% Similarity=0.294 Sum_probs=52.4
Q ss_pred CCCCHHHCCC-CCCCCCCHHHHHHHHHC---CCCCCEEEECCCCCCHHHHHHHHH-----CCEEEEECCCHHHHHHHHHH
Q ss_conf 4320110116-07833400986886608---388888998376882889999974-----89099980998999999998
Q gi|255764511|r 7 KTMSSAIHHT-IGDHVPVLLEKVIALLN---PAPGKVILDATFGAGGYSRSFCKM-----GSNVIALDRDPFAVSCGQET 77 (341)
Q Consensus 7 ~~m~~~~~~~-~~~H~PVll~Evl~~l~---~~~~g~~iD~TlG~GGHS~~iL~~-----~~~liaiDrD~~ai~~a~~~ 77 (341)
T Consensus 52 ~~mv~AR~~fL~~G~y~pl~~~i~~~~~~~~~~~~~~ilD~GCGEGyYl~~l~~~l~~~~~~~~~G~DiSK~ai~~Aak~ 131 (272)
T PRK11088 52 KEMMQARRAFLDAGHYQPLRDAVANLLAERLDEKATAILDIGCGEGYYTHALADALPEVTTCQLFGLDISKVAIKYAAKR 131 (272)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCC
T ss_conf 99999999999768847999999999997567778648881587778999999974115787379981179999999626
Q ss_pred HH
Q ss_conf 52
Q gi|255764511|r 78 MR 79 (341)
Q Consensus 78 l~ 79 (341)
T Consensus 132 ~~ 133 (272)
T PRK11088 132 YP 133 (272)
T ss_pred CC
T ss_conf 88