HHsearch alignment for GI: 255764511 and conserved domain: smart00650
>smart00650 rADc Ribosomal RNA adenine dimethylases.
Probab=96.94 E-value=0.0063 Score=39.58 Aligned_cols=71 Identities=17% Similarity=0.349 Sum_probs=63.2
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHH
Q ss_conf 986886608388888998376882889999974890999809989999999985214885277113278898
Q gi|255764511|r 25 LEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQ 96 (341)
Q Consensus 25 l~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~ 96 (341)
T Consensus 2 i~kIv~~a~~~~~d~VlEIGPG~G~LT~~Ll~~~~~v~aiE~D~~l~~~L~~~~~~~-~n~~ii~~D~L~~~ 72 (169)
T smart00650 2 IDKIVRAANLRPGDTVLEIGPGKGALTEELLERAARVTAIEIDPRLAPRLREKFAAA-DNLTVIHGDALKFD 72 (169)
T ss_pred HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCC-CCEEEEECCHHCCC
T ss_conf 889988638999497999689702999999973163531637889999999864107-97799957111255