HHsearch results for GI: 255764511 and protein with PDBid: 1vlm_A
>1vlm_A SAM-dependent methyltransferase; possible histamine N-methyltransferase, structural genomics, JCSG, protein structure initiative, PSI; 2.20A {Thermotoga maritima MSB8} SCOP: c.66.1.41
Probab=93.79 E-value=0.057 Score=31.99 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=51.6
Q ss_pred CCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf 33400986886608388888998376882889999974890999809989999999985214885277113278898765
Q gi|255764511|r 20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYV 99 (341)
Q Consensus 20 H~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l 99 (341)
|......++...-...|++.++|.=.|.|..+..+ .+++|+|..+.++..|+++ .+.+++++..++. .
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l----~~~~giD~s~~~i~~a~~~------~i~~~~~d~~~l~--~ 98 (219)
T 1vlm_A 31 HRFAYLSELQAVKCLLPEGRGVEIGVGTGRFAVPL----KIKIGVEPSERMAEIARKR------GVFVLKGTAENLP--L 98 (219)
T ss_dssp THHHHHHHHHHHHHHCCSSCEEEETCTTSTTHHHH----TCCEEEESCHHHHHHHHHT------TCEEEECBTTBCC--S
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH----HHEEEEECCHHHHHHHHHC------CCEEEECCHHHCC--C
T ss_conf 58999999999972389990999858677999977----5869994999999999986------9989987778789--9
Q ss_pred HHCCCCEEEEE
Q ss_conf 31233247862
Q gi|255764511|r 100 PDKGVDGVVFD 110 (341)
Q Consensus 100 ~~~~vdgIl~D 110 (341)
+...+|.|+.-
T Consensus 99 ~~~sfD~V~~~ 109 (219)
T 1vlm_A 99 KDESFDFALMV 109 (219)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCCCEECCC
T ss_conf 87873320313