HHsearch results for GI: 255764511 and protein with PDBid: 2ipx_A
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.44 E-value=0.00069 Score=44.36 Aligned_cols=84 Identities=12% Similarity=0.036 Sum_probs=65.6
Q ss_pred HHHHHCCCCCCEEEECCCCCCHHHHHHHHH---CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH-HCC
Q ss_conf 886608388888998376882889999974---8909998099899999999852148852771132788987653-123
Q gi|255764511|r 28 VIALLNPAPGKVILDATFGAGGYSRSFCKM---GSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVP-DKG 103 (341)
Q Consensus 28 vl~~l~~~~~g~~iD~TlG~GGHS~~iL~~---~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~-~~~ 103 (341)
-++.+.++||..++|.-.|.|..+..+.+. +++|||+|.+|.++..++++..+. .++.++.........+.. ...
T Consensus 69 ~l~~l~lkpG~~VLDlG~G~G~~~~~la~~vg~~G~V~aVD~s~~~l~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 69 GVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp TCSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCC
T ss_pred CHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC-CCCCEEEEECCCCHHCCCCCCE
T ss_conf 555259999999999657689899999998599967999979999999999975514-6664289753670111566526
Q ss_pred CCEEEEECC
Q ss_conf 324786225
Q gi|255764511|r 104 VDGVVFDLG 112 (341)
Q Consensus 104 vdgIl~DLG 112 (341)
||.|+.|+.
T Consensus 148 vd~i~~~~~ 156 (233)
T 2ipx_A 148 VDVIFADVA 156 (233)
T ss_dssp EEEEEECCC
T ss_pred EEEEECCCC
T ss_conf 888531422