HHsearch results for GI: 255764511 and protein with PDBid: 2jjq_A

>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*

Probab=95.28  E-value=0.16  Score=29.18  Aligned_cols=56  Identities=30%  Similarity=0.429  Sum_probs=45.2

Q ss_pred             CCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             40098688660838888899837688288999997489099980998999999998521
Q gi|255764511|r   22 PVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRD   80 (341)
Q Consensus        22 PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~   80 (341)
                      ..|++++++.   .++..++|.=-|-|--|..+.+...+|+|+|.++.|+..|++..+.
T Consensus       279 ~~L~~~v~~~---~~~~~vlDLycG~G~fsl~LA~~~~~V~gvE~~~~av~~A~~na~~  334 (425)
T 2jjq_A          279 VNLVRKVSEL---VEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEI  334 (425)
T ss_dssp             HHHHHHHHHH---CCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCC---CCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             5421222203---6877787626786688899874285545750468889999998987