HHsearch results for GI: 255764511 and protein with PDBid: 2yvl_A
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural genomics, NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus VF5}
Probab=98.21 E-value=1.2e-05 Score=55.76 Aligned_cols=90 Identities=16% Similarity=0.230 Sum_probs=76.1
Q ss_pred CCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC--CCEEEECCCHHHHHHH
Q ss_conf 34009868866083888889983768828899999748909998099899999999852148--8527711327889876
Q gi|255764511|r 21 VPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK--EQFSLFQATFSQLQDY 98 (341)
Q Consensus 21 ~PVll~Evl~~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~--~r~~~~~~~F~~i~~~ 98 (341)
+|--..-++..+++.||..++|+=.|.|+.|..+.+..++|+++|.+++.++.|+++++.++ +++.+++.++.+. .
T Consensus 76 ypkD~~~Ii~~l~i~pG~rVLEiGtGsG~lt~~La~~~g~v~t~e~~e~~~~~A~~n~~~~g~~~nv~~~~~D~~~~--~ 153 (248)
T 2yvl_A 76 YPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDA--E 153 (248)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTS--C
T ss_pred CHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHC--C
T ss_conf 78999999998289999979973743119999998607879998288999999999899700577059999122214--3
Q ss_pred HHHCCCCEEEEECC
Q ss_conf 53123324786225
Q gi|255764511|r 99 VPDKGVDGVVFDLG 112 (341)
Q Consensus 99 l~~~~vdgIl~DLG 112 (341)
.++..+|.|++|+.
T Consensus 154 ~~~~~fD~V~ld~p 167 (248)
T 2yvl_A 154 VPEGIFHAAFVDVR 167 (248)
T ss_dssp CCTTCBSEEEECSS
T ss_pred CCCCCCCEEEEECC
T ss_conf 24587899999178