HHsearch results for GI: 255764511 and protein with PDBid: 3frh_A
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.28 E-value=0.023 Score=34.52 Aligned_cols=88 Identities=11% Similarity=0.003 Sum_probs=59.8
Q ss_pred HHCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 60838888899837688288999997489099980998999999998521488527711327889876531233247862
Q gi|255764511|r 31 LLNPAPGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYKEQFSLFQATFSQLQDYVPDKGVDGVVFD 110 (341)
Q Consensus 31 ~l~~~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~~r~~~~~~~F~~i~~~l~~~~vdgIl~D 110 (341)
.+...+++.++|.=.|.|..+..+ ..+.+|+|+|.++.++..|++++...+-.+.+.+.... .......+|.|+.-
T Consensus 100 ~~~~~~~~~VLDlGCG~G~l~~~~-~~~~~v~gvD~s~~~l~~ar~~~~~~~~~~~~~~~d~~---~~~~~~~~D~v~~~ 175 (253)
T 3frh_A 100 IFSAETPRRVLDIACGLNPLALYE-RGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVL---CAPPAEAGDLALIF 175 (253)
T ss_dssp HTSSCCCSEEEEETCTTTHHHHHH-TTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTT---TSCCCCBCSEEEEE
T ss_pred HHCCCCCCEEEEECCCCCHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCHH---HCCCCCCCCHHHHH
T ss_conf 845899985999678888999997-68983899979799999999999982997048855622---24577674410542
Q ss_pred CCCHHHHHHHHHHC
Q ss_conf 25207888765407
Q gi|255764511|r 111 LGVSSMQIDCGDRG 124 (341)
Q Consensus 111 LGvSS~Qld~~~RG 124 (341)
+ .-+++++++++
T Consensus 176 -~-vl~~l~~~~~~ 187 (253)
T 3frh_A 176 -K-LLPLLEREQAG 187 (253)
T ss_dssp -S-CHHHHHHHSTT
T ss_pred -C-HHHHCCHHHHH
T ss_conf -4-48648987899