HHsearch results for GI: 255764511 and protein with PDBid: 3mti_A
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus}
Probab=98.65 E-value=1.4e-07 Score=68.14 Aligned_cols=89 Identities=21% Similarity=0.355 Sum_probs=71.6
Q ss_pred HHHHHHHHHCC--CCCCEEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHH
Q ss_conf 09868866083--888889983768828899999748909998099899999999852148-852771132788987653
Q gi|255764511|r 24 LLEKVIALLNP--APGKVILDATFGAGGYSRSFCKMGSNVIALDRDPFAVSCGQETMRDYK-EQFSLFQATFSQLQDYVP 100 (341)
Q Consensus 24 ll~Evl~~l~~--~~~g~~iD~TlG~GGHS~~iL~~~~~liaiDrD~~ai~~a~~~l~~~~-~r~~~~~~~F~~i~~~l~ 100 (341)
+++..-+++.. .+|.+++|+..|.|+.|..+-+..++|+|+|.+++|++.|+++.+..+ +++.++++++.++..++.
T Consensus 8 ~~~~~~~~l~~~l~~~~~VLD~gcG~G~~t~~LA~~~~~V~aiDis~~al~~a~~n~~~~~l~nv~~~~~~~~~l~~~~~ 87 (185)
T 3mti_A 8 PIHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVR 87 (185)
T ss_dssp HHHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCC
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCC
T ss_conf 79999999996589999999996388899999982699899758987888789999998299848999936777555135
Q ss_pred HCCCCEEEEECCC
Q ss_conf 1233247862252
Q gi|255764511|r 101 DKGVDGVVFDLGV 113 (341)
Q Consensus 101 ~~~vdgIl~DLGv 113 (341)
..++.+++|+.+
T Consensus 88 -~~~~~v~~~~~~ 99 (185)
T 3mti_A 88 -EPIRAAIFNLGY 99 (185)
T ss_dssp -SCEEEEEEEEC-
T ss_pred -CCCCEEEEECCC
T ss_conf -666569995265