RPSBLAST alignment for GI: 255764511 and conserved domain: PRK00050

>gnl|CDD|178824 PRK00050, PRK00050, 16S rRNA m(4)C1402 methyltranserfase; Provisional. Length = 296
 Score =  397 bits (1023), Expect = e-111
 Identities = 133/304 (43%), Positives = 192/304 (63%), Gaps = 17/304 (5%)

Query: 20  HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSN---VIALDRDPFAVSCGQE 76
           H+PVLL++V+  L   P  + +D TFG GG+SR+  +       +IA+DRDP A++  ++
Sbjct: 3   HIPVLLDEVVDALAIKPDGIYVDGTFGGGGHSRAILERLGPKGRLIAIDRDPDAIAAAKD 62

Query: 77  TMRDYKEQFSLFQATFSQLQDYVPD--KGVDGVVFDLGVSSMQIDCGDRGFSFQKSGPLD 134
            ++ +  +F+L    FS L++ + +    VDG++ DLGVSS Q+D  +RGFSF+K GPLD
Sbjct: 63  RLKPFG-RFTLVHGNFSNLKEVLAEGLGKVDGILLDLGVSSPQLDDAERGFSFRKDGPLD 121

Query: 135 MRMSCS-GISASDVVNQANVKDLTRILGILGEEKQASRIAHAIVKRRQSAPFQTTQDLSS 193
           MRM  S G++A++VVN  + ++L RI    GEE+ A RIA AIV+ R   P  TT +L+ 
Sbjct: 122 MRMDQSQGLTAAEVVNTYSEEELARIFKEYGEERFARRIARAIVEARPKKPITTTGELAE 181

Query: 194 LIQKTVYFSKNNRIHPATRSFQALRIFVNNEIEELAQGLRSAEKALKAGGLLIVVSFHSL 253
           +I K+    +   IHPATR+FQALRI VN+E+EEL + L +A   LK GG L V+SFHSL
Sbjct: 182 II-KSAVPPRRKGIHPATRTFQALRIEVNDELEELERALEAALDLLKPGGRLAVISFHSL 240

Query: 254 EDRLVKKFFASRSGKVMAVRHMIPSNAHPAVFQSITKKVVVPTQEDVAFNRRSRSAKLRA 313
           EDR+VK+FF   S               P   + +TKK + P++E++A N R+RSAKLR 
Sbjct: 241 EDRIVKRFFRELSKG--------CCGNKP-KLKLLTKKPIKPSEEEIAANPRARSAKLRV 291

Query: 314 GMRT 317
             R 
Sbjct: 292 AERL 295