RPSBLAST alignment for GI: 255764511 and conserved domain: PRK00050
>gnl|CDD|178824 PRK00050, PRK00050, 16S rRNA m(4)C1402 methyltranserfase; Provisional. Length = 296
Score = 397 bits (1023), Expect = e-111
Identities = 133/304 (43%), Positives = 192/304 (63%), Gaps = 17/304 (5%)
Query: 20 HVPVLLEKVIALLNPAPGKVILDATFGAGGYSRSFCKMGSN---VIALDRDPFAVSCGQE 76
H+PVLL++V+ L P + +D TFG GG+SR+ + +IA+DRDP A++ ++
Sbjct: 3 HIPVLLDEVVDALAIKPDGIYVDGTFGGGGHSRAILERLGPKGRLIAIDRDPDAIAAAKD 62
Query: 77 TMRDYKEQFSLFQATFSQLQDYVPD--KGVDGVVFDLGVSSMQIDCGDRGFSFQKSGPLD 134
++ + +F+L FS L++ + + VDG++ DLGVSS Q+D +RGFSF+K GPLD
Sbjct: 63 RLKPFG-RFTLVHGNFSNLKEVLAEGLGKVDGILLDLGVSSPQLDDAERGFSFRKDGPLD 121
Query: 135 MRMSCS-GISASDVVNQANVKDLTRILGILGEEKQASRIAHAIVKRRQSAPFQTTQDLSS 193
MRM S G++A++VVN + ++L RI GEE+ A RIA AIV+ R P TT +L+
Sbjct: 122 MRMDQSQGLTAAEVVNTYSEEELARIFKEYGEERFARRIARAIVEARPKKPITTTGELAE 181
Query: 194 LIQKTVYFSKNNRIHPATRSFQALRIFVNNEIEELAQGLRSAEKALKAGGLLIVVSFHSL 253
+I K+ + IHPATR+FQALRI VN+E+EEL + L +A LK GG L V+SFHSL
Sbjct: 182 II-KSAVPPRRKGIHPATRTFQALRIEVNDELEELERALEAALDLLKPGGRLAVISFHSL 240
Query: 254 EDRLVKKFFASRSGKVMAVRHMIPSNAHPAVFQSITKKVVVPTQEDVAFNRRSRSAKLRA 313
EDR+VK+FF S P + +TKK + P++E++A N R+RSAKLR
Sbjct: 241 EDRIVKRFFRELSKG--------CCGNKP-KLKLLTKKPIKPSEEEIAANPRARSAKLRV 291
Query: 314 GMRT 317
R
Sbjct: 292 AERL 295