HHsearch alignment for GI: 255764513 and conserved domain: COG0018
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=98.98 E-value=3.2e-09 Score=82.92 Aligned_cols=291 Identities=17% Similarity=0.162 Sum_probs=137.4
Q ss_pred CCEEEEC-CCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEE---EECCCCCCCCCHHHHHHHHHHHHHCCCCCC-CCCC
Q ss_conf 7705634-843388785015999999999999718--84999---970486663886799999999886589888-6765
Q gi|255764513|r 5 SKVRVRI-APSPTGEPHIGTAYTALFNYLIAKRTG--GKFIL---RIEDTDSKRSTLESENAVMQSLKWCGLNWD-EGPD 77 (492)
Q Consensus 5 ~~v~~Rf-aPsPtG~lH~G~~rtal~n~l~a~~~~--g~f~l---RieDtd~~R~~~~~~~~i~~~l~wlgl~~D-e~~~ 77 (492)
T Consensus 117 ~kV~iE~sSaNptkplHiGHlR~aiiGDsLaril~~~Gy~V~r~~yvnD~G~Q------~~~l~~~~~~~~~e~~~~~~~ 190 (577)
T COG0018 117 KKVVIEYSSANPTGPLHIGHLRNAIIGDSLARILEFLGYDVTRENYVNDWGTQ------IGMLALSYEKRGREALGLTPE 190 (577)
T ss_pred CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHH------HHHHHHHHHHHCCCCCCCCCC
T ss_conf 87999874799999852332353688999999999839976678667857999------999999999955410137777
Q ss_pred CCCCCCCEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC---CCCHHHHHHHHH-CCC
Q ss_conf 5887676323262899999999999889824514889997766887664310002366555---788333001120-257
Q gi|255764513|r 78 IGGAYGPYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCL---KLSSQEIERLSQ-EQK 153 (492)
Q Consensus 78 ~~g~~~p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r---~l~~~e~~~~~~-~g~ 153 (492)
T Consensus 191 --------~~~~lg~~y~~i~~~~~~~~~~~~-~~~~~~---~~k~e--~~d~~~--~lw~~~v~~~l~~~k~~l~~l~V 254 (577)
T COG0018 191 --------PDGYLGEYYVKIAKDLEEDPGNDE-EEAREE---VEKLE--SGDEEA--ELWRKFVDLSLEGIKETLDRLGV 254 (577)
T ss_pred --------CHHHHHHHHHHHHHHHHHCCCCCH-HHHHHH---HHHHH--CCCHHH--HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf --------206889999999999974846126-788999---99886--477578--99999999999999999999295
Q ss_pred CCEEEEEECCCCEEECCC--------C--------CCCCEECCCC---CC---CCCCEECCCCCHHHH---HHHHHHHHH
Q ss_conf 740788622431143047--------5--------1340213643---23---564100045324898---678876444
Q gi|255764513|r 154 KHVVRLTVPNQGSCVFQD--------K--------VYGEMEIPWN---AV---DMQVLLKSDGMPTYH---LANVIDDHL 208 (492)
Q Consensus 154 ~~~iR~k~p~~~~~~~~D--------~--------i~G~~~~~~~---~~---~D~vi~r~dg~ptY~---~a~vvDD~~ 208 (492)
T Consensus 255 ~fD~~~-~--E~e~~~~~~~~~vv~~L~~~~~~~e~~GA~~vdl~~~~~~gd~~~~vl~KSDGt~lY~t~DIAy~~~K~~ 331 (577)
T COG0018 255 KFDVYD-S--EGESFYNGKVEKVVEDLEEKGLLYEDDGALVVDLLKFKKFGDDKDRVLQKSDGTYLYFTRDIAYHLYKFE 331 (577)
T ss_pred CCEEEE-C--CCHHHHCCCHHHHHHHHHHCCCEEEECCEEEEEHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHHHH
T ss_conf 300132-3--4265526649999999986697760099589864321111687772899769970542538999999973
Q ss_pred HHHHHHH--CCCCCCCHHHHHHHHHHHHHHCCCH--HHHHH--HHHHHHCCCCCCCCCC-CCHHHHHHC-CCCHHHHHHH
Q ss_conf 4444311--2235430247889999985100000--10145--5531101322122343-302456662-9773779989
Q gi|255764513|r 209 MKITHVA--RGEEWISSVPKHILLYQYFNFPIPE--FIHLP--LIKNPDKSKLSKRRNP-TSISYYSAM-GYLPEALINF 280 (492)
Q Consensus 209 m~ithvi--Rg~d~~~~t~~q~~l~~al~~~~p~--f~H~p--li~~~~g~klSKR~~~-~~i~~~~~~-GylPeAilNy 280 (492)
T Consensus 332 ~~~d~~IyV~gadq~~~~~ql~~~l~~~g~~~~~~~~~h~~~~l~~~~~g~kmStR~G~~vtl~dllde~~era---~~~ 408 (577)
T COG0018 332 RGFDKLIYVLGADQHGHFKQLKAVLELLGYGPDKEVLLHQGVGLVRGGEGVKMSTRAGNVVTLDDLLDEAGERA---PEE 408 (577)
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHH---HHH
T ss_conf 69988999967862449999999999846998656189997752577877634224886578999999998876---667
Q ss_pred HHHCCCCCCCCCHHHCCH--HHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 985067666553011014--67776520211375544201565566435
Q gi|255764513|r 281 LALLFVHKSEDDDELMDM--QQLIHHFDLHHLSKAGAVFDKQKLDWLNG 327 (492)
Q Consensus 281 LalLGws~~~~d~Eifsl--~eli~~FdL~~I~Ks~A~FD~eKL~wlN~ 327 (492)
T Consensus 409 ~~~~---~~~-~~~iA~~vgi~Avry~~l~~~~~~~~~Fd~d~~lsfeg 453 (577)
T COG0018 409 MEEK---EEK-NEEIAEVVGIDAVRYADLSRSRDKDYVFDWDKALSFEG 453 (577)
T ss_pred HHHH---HHH-HHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCC
T ss_conf 6543---211-57777775240678998862899994753999974459