HHsearch alignment for GI: 255764513 and conserved domain: COG0018

>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=98.98  E-value=3.2e-09  Score=82.92  Aligned_cols=291  Identities=17%  Similarity=0.162  Sum_probs=137.4

Q ss_pred             CCEEEEC-CCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEE---EECCCCCCCCCHHHHHHHHHHHHHCCCCCC-CCCC
Q ss_conf             7705634-843388785015999999999999718--84999---970486663886799999999886589888-6765
Q gi|255764513|r    5 SKVRVRI-APSPTGEPHIGTAYTALFNYLIAKRTG--GKFIL---RIEDTDSKRSTLESENAVMQSLKWCGLNWD-EGPD   77 (492)
Q Consensus         5 ~~v~~Rf-aPsPtG~lH~G~~rtal~n~l~a~~~~--g~f~l---RieDtd~~R~~~~~~~~i~~~l~wlgl~~D-e~~~   77 (492)
T Consensus       117 ~kV~iE~sSaNptkplHiGHlR~aiiGDsLaril~~~Gy~V~r~~yvnD~G~Q------~~~l~~~~~~~~~e~~~~~~~  190 (577)
T COG0018         117 KKVVIEYSSANPTGPLHIGHLRNAIIGDSLARILEFLGYDVTRENYVNDWGTQ------IGMLALSYEKRGREALGLTPE  190 (577)
T ss_pred             CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHH------HHHHHHHHHHHCCCCCCCCCC
T ss_conf             87999874799999852332353688999999999839976678667857999------999999999955410137777


Q ss_pred             CCCCCCCEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC---CCCHHHHHHHHH-CCC
Q ss_conf             5887676323262899999999999889824514889997766887664310002366555---788333001120-257
Q gi|255764513|r   78 IGGAYGPYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCL---KLSSQEIERLSQ-EQK  153 (492)
Q Consensus        78 ~~g~~~p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r---~l~~~e~~~~~~-~g~  153 (492)
T Consensus       191 --------~~~~lg~~y~~i~~~~~~~~~~~~-~~~~~~---~~k~e--~~d~~~--~lw~~~v~~~l~~~k~~l~~l~V  254 (577)
T COG0018         191 --------PDGYLGEYYVKIAKDLEEDPGNDE-EEAREE---VEKLE--SGDEEA--ELWRKFVDLSLEGIKETLDRLGV  254 (577)
T ss_pred             --------CHHHHHHHHHHHHHHHHHCCCCCH-HHHHHH---HHHHH--CCCHHH--HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             --------206889999999999974846126-788999---99886--477578--99999999999999999999295


Q ss_pred             CCEEEEEECCCCEEECCC--------C--------CCCCEECCCC---CC---CCCCEECCCCCHHHH---HHHHHHHHH
Q ss_conf             740788622431143047--------5--------1340213643---23---564100045324898---678876444
Q gi|255764513|r  154 KHVVRLTVPNQGSCVFQD--------K--------VYGEMEIPWN---AV---DMQVLLKSDGMPTYH---LANVIDDHL  208 (492)
Q Consensus       154 ~~~iR~k~p~~~~~~~~D--------~--------i~G~~~~~~~---~~---~D~vi~r~dg~ptY~---~a~vvDD~~  208 (492)
T Consensus       255 ~fD~~~-~--E~e~~~~~~~~~vv~~L~~~~~~~e~~GA~~vdl~~~~~~gd~~~~vl~KSDGt~lY~t~DIAy~~~K~~  331 (577)
T COG0018         255 KFDVYD-S--EGESFYNGKVEKVVEDLEEKGLLYEDDGALVVDLLKFKKFGDDKDRVLQKSDGTYLYFTRDIAYHLYKFE  331 (577)
T ss_pred             CCEEEE-C--CCHHHHCCCHHHHHHHHHHCCCEEEECCEEEEEHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHHHH
T ss_conf             300132-3--4265526649999999986697760099589864321111687772899769970542538999999973


Q ss_pred             HHHHHHH--CCCCCCCHHHHHHHHHHHHHHCCCH--HHHHH--HHHHHHCCCCCCCCCC-CCHHHHHHC-CCCHHHHHHH
Q ss_conf             4444311--2235430247889999985100000--10145--5531101322122343-302456662-9773779989
Q gi|255764513|r  209 MKITHVA--RGEEWISSVPKHILLYQYFNFPIPE--FIHLP--LIKNPDKSKLSKRRNP-TSISYYSAM-GYLPEALINF  280 (492)
Q Consensus       209 m~ithvi--Rg~d~~~~t~~q~~l~~al~~~~p~--f~H~p--li~~~~g~klSKR~~~-~~i~~~~~~-GylPeAilNy  280 (492)
T Consensus       332 ~~~d~~IyV~gadq~~~~~ql~~~l~~~g~~~~~~~~~h~~~~l~~~~~g~kmStR~G~~vtl~dllde~~era---~~~  408 (577)
T COG0018         332 RGFDKLIYVLGADQHGHFKQLKAVLELLGYGPDKEVLLHQGVGLVRGGEGVKMSTRAGNVVTLDDLLDEAGERA---PEE  408 (577)
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHH---HHH
T ss_conf             69988999967862449999999999846998656189997752577877634224886578999999998876---667


Q ss_pred             HHHCCCCCCCCCHHHCCH--HHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf             985067666553011014--67776520211375544201565566435
Q gi|255764513|r  281 LALLFVHKSEDDDELMDM--QQLIHHFDLHHLSKAGAVFDKQKLDWLNG  327 (492)
Q Consensus       281 LalLGws~~~~d~Eifsl--~eli~~FdL~~I~Ks~A~FD~eKL~wlN~  327 (492)
T Consensus       409 ~~~~---~~~-~~~iA~~vgi~Avry~~l~~~~~~~~~Fd~d~~lsfeg  453 (577)
T COG0018         409 MEEK---EEK-NEEIAEVVGIDAVRYADLSRSRDKDYVFDWDKALSFEG  453 (577)
T ss_pred             HHHH---HHH-HHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCC
T ss_conf             6543---211-57777775240678998862899994753999974459