HHsearch alignment for GI: 255764513 and conserved domain: PRK11893
>PRK11893 methionyl-tRNA synthetase; Reviewed.
Probab=99.24 E-value=3.8e-10 Score=89.21 Aligned_cols=266 Identities=17% Similarity=0.199 Sum_probs=136.4
Q ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCCCC----------------CCCCHHHHHHHHHHHHHCCC
Q ss_conf 63484338878501599999999999971--8849999704866----------------63886799999999886589
Q gi|255764513|r 9 VRIAPSPTGEPHIGTAYTALFNYLIAKRT--GGKFILRIEDTDS----------------KRSTLESENAVMQSLKWCGL 70 (492)
Q Consensus 9 ~RfaPsPtG~lH~G~~rtal~n~l~a~~~--~g~f~lRieDtd~----------------~R~~~~~~~~i~~~l~wlgl 70 (492)
T Consensus 6 t~p~Py~nG~lHlGHa~~~~~~Dv~~Ry~R~~G~~v~~~~GtD~hg~~i~~~A~~~g~~p~e~~~~~~~~~~~~~~~l~i 85 (512)
T PRK11893 6 TTPIYYPNGKPHIGHAYTTLAADVLARFKRLRGYDVFFLTGTDEHGQKIERKAEEAGISPQELADRNSASFKRLWEALNI 85 (512)
T ss_pred ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 68999889973446358799999999999955997074687177519999999985999999999999999999998099
Q ss_pred CCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCEEE-----CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf 888676558876763232628999999999998898245-----148899977668876643100023665557883330
Q gi|255764513|r 71 NWDEGPDIGGAYGPYRQSERKNIYQPYVQNLLEKKLAFR-----CFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSSQEI 145 (492)
Q Consensus 71 ~~De~~~~~g~~~p~~QS~r~~~y~~~~~~L~~~g~aY~-----c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~~e~ 145 (492)
T Consensus 86 ~~D~f~r---T----~~~~~~~~v~~~f~~L~~~G~iy~~~~~~~yc~~c~~~~~-~~~~~-~~~-~~~~~~~------- 148 (512)
T PRK11893 86 SYDDFIR---T----TDERHKEAVQEIFQRLLANGDIYLGKYSGWYCVRCEEFKT-ESEAR-LGE-DGCPRCP------- 148 (512)
T ss_pred CCCCCCC---C----CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCC-HHHHC-CCC-CCCCCCC-------
T ss_conf 8887877---9----9879999999999999767977432444322688644457-77723-665-7886555-------
Q ss_pred HHHHHCCCCCEEE------EEECCCCEEECCCCCCCCE-------------ECCCCCCCCCCEECCC---CCH-------
Q ss_conf 0112025774078------8622431143047513402-------------1364323564100045---324-------
Q gi|255764513|r 146 ERLSQEQKKHVVR------LTVPNQGSCVFQDKVYGEM-------------EIPWNAVDMQVLLKSD---GMP------- 196 (492)
Q Consensus 146 ~~~~~~g~~~~iR------~k~p~~~~~~~~D~i~G~~-------------~~~~~~~~D~vi~r~d---g~p------- 196 (492)
T Consensus 149 ----~~g~~~e~~~~~~~flkl~~~~~-~l~~~~~~~~~~~~p~~~~~~~~~~l~~~l~d~~ISR~~~~WGi~vP~~~~~ 223 (512)
T PRK11893 149 ----IHGKPVEWVEEESYFFRLSKYQD-KLLELYEANPDFIQPESRRNEVINFVKSGLKDLSISRTNFDWGIPVPGDPKH 223 (512)
T ss_pred ----CCCCCCEEEECCCCEECCHHHHH-HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCC
T ss_conf ----57997768724761120505467-7999972498651869999999999857787661525678789988888886
Q ss_pred ----------HHHHHH----HHHHHHH-----HHHHHHCCCCCCCHHHHHHH----HHHHHHHCCCH--HHHHHHHHHHH
Q ss_conf ----------898678----8764444-----44431122354302478899----99985100000--10145553110
Q gi|255764513|r 197 ----------TYHLAN----VIDDHLM-----KITHVARGEEWISSVPKHIL----LYQYFNFPIPE--FIHLPLIKNPD 251 (492)
Q Consensus 197 ----------tY~~a~----vvDD~~m-----~ithviRg~d~~~~t~~q~~----l~~al~~~~p~--f~H~pli~~~~ 251 (492)
T Consensus 224 ~~yvWfda~~~y~s~~~~~~~~~~~~~~~~w~~~vh~-~G~Dii~---fH~~~~~a~l~~~~~~~p~~~~~h-g~l~-~~ 297 (512)
T PRK11893 224 VIYVWFDALLNYLTALGYDEPDLEELFRKYWPADVHL-IGKDILR---FHAVYWPAFLMAAGLPLPKRVFAH-GFLT-ND 297 (512)
T ss_pred CEEEHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEE-CCCCCCC---HHHHHHHHHHHHCCCCCCCCCCCC-EEEE-EC
T ss_conf 2011253135567764588765647898448750432-3665120---138889999986699988634311-1488-75
Q ss_pred CCCCCCCCC-CCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHH
Q ss_conf 132212234-3302456662977377998998506766655301101467776520
Q gi|255764513|r 252 KSKLSKRRN-PTSISYYSAMGYLPEALINFLALLFVHKSEDDDELMDMQQLIHHFD 306 (492)
Q Consensus 252 g~klSKR~~-~~~i~~~~~~GylPeAilNyLalLGws~~~~d~Eifsl~eli~~Fd 306 (492)
T Consensus 298 G~KmSKS~Gn~I~~~d~l~~-yg~D~lR~~L~~~~--p~-~~D~~Fs~~~f~~~~N 349 (512)
T PRK11893 298 GQKMSKSLGNVIDPFDLVDK-FGVDAVRYFLLREI--PF-GQDGDFSEEAFINRIN 349 (512)
T ss_pred CCEECCCCCCCCCHHHHHHH-CCCCHHHHHHHHCC--CC-CCCCCCCHHHHHHHHH
T ss_conf 71501347875899999998-59504028776328--87-7787878999998975