HHsearch alignment for GI: 255764513 and conserved domain: PRK12267
>PRK12267 methionyl-tRNA synthetase; Reviewed.
Probab=98.84 E-value=6.7e-09 Score=80.76 Aligned_cols=284 Identities=14% Similarity=0.166 Sum_probs=144.3
Q ss_pred CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCCC----------------CCCCCHHHHHHHH
Q ss_conf 9888770563484338878501599999999999971--884999970486----------------6638867999999
Q gi|255764513|r 1 MISSSKVRVRIAPSPTGEPHIGTAYTALFNYLIAKRT--GGKFILRIEDTD----------------SKRSTLESENAVM 62 (492)
Q Consensus 1 ~~~~~~v~~RfaPsPtG~lH~G~~rtal~n~l~a~~~--~g~f~lRieDtd----------------~~R~~~~~~~~i~ 62 (492)
T Consensus 1 mm~k~~~iTt~ipY~Ng~~HiGHa~~~i~aDv~aRy~R~~G~~v~f~~GtDehG~kI~~~A~~~g~tP~e~~d~~~~~~~ 80 (644)
T PRK12267 1 MMKKTFYITTPIYYPSGKLHIGHAYTTIAADVLARYKRLQGYDVFFLTGTDEHGQKIQQKAEEAGITPQEYVDEISAGFK 80 (644)
T ss_pred CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 99999899689988899855453487899999999998469975984876875299999999859999999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCEEEC-----CCCHHHHHHHHHHHHH-HHCCCCCCCC
Q ss_conf 998865898886765588767632326289999999999988982451-----4889997766887664-3100023665
Q gi|255764513|r 63 QSLKWCGLNWDEGPDIGGAYGPYRQSERKNIYQPYVQNLLEKKLAFRC-----FCSTERLEEMRRAQRK-RNIPSRYDGH 136 (492)
Q Consensus 63 ~~l~wlgl~~De~~~~~g~~~p~~QS~r~~~y~~~~~~L~~~g~aY~c-----~~t~eel~~~r~~~~~-~~~~~~Y~~~ 136 (492)
T Consensus 81 ~~~~~l~Is~D~f~r-------Tt~~~h~~~vq~if~~L~~kG~Iy~~~~~~~Yc~~ce~f~-~~~~l~d~g~cp~cg~~ 152 (644)
T PRK12267 81 DLWDKLDISYDKFIR-------TTDERHKKVVQKVFEKLYDQGDIYLGEYEGWYCVSCETFF-TESQLVDGGKCPDSGHE 152 (644)
T ss_pred HHHHHCCCCCCCCCC-------CCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC-CHHHCCCCCCCCCCCCC
T ss_conf 999986996787854-------8988999999999999998899786655123258754333-62440457868778997
Q ss_pred CC---------CCCHH----------------------HH-HHHHHCCC--------CCEEEEEECCCC---EEECCCCC
Q ss_conf 55---------78833----------------------30-01120257--------740788622431---14304751
Q gi|255764513|r 137 CL---------KLSSQ----------------------EI-ERLSQEQK--------KHVVRLTVPNQG---SCVFQDKV 173 (492)
Q Consensus 137 ~r---------~l~~~----------------------e~-~~~~~~g~--------~~~iR~k~p~~~---~~~~~D~i 173 (492)
T Consensus 153 ~e~~~ee~yffkL~~~~~~L~~~~~~~p~~i~p~~~~ne~~~~~l~~gL~D~~ISR~~~~WGipvP~d~~~v~YVWfDA~ 232 (644)
T PRK12267 153 VELVKEESYFFRMSKYADRLLEFYEENPDFIQPESRKNEMLNNFIKPGLEDLAVSRTSFDWGIPVPSDPKHVVYVWIDAL 232 (644)
T ss_pred CEEECCCCEEEEHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 64640565144346678999999960997467625887999999857785543024778888857898760799842243
Q ss_pred CCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH-HHHHHHHHHHCCCH--HHHHHHHHHH
Q ss_conf 34021364323564100045324898678876444444431122354302478-89999985100000--1014555311
Q gi|255764513|r 174 YGEMEIPWNAVDMQVLLKSDGMPTYHLANVIDDHLMKITHVARGEEWISSVPK-HILLYQYFNFPIPE--FIHLPLIKNP 250 (492)
Q Consensus 174 ~G~~~~~~~~~~D~vi~r~dg~ptY~~a~vvDD~~m~ithviRg~d~~~~t~~-q~~l~~al~~~~p~--f~H~pli~~~ 250 (492)
T Consensus 233 i~Yisa~-------------g~~~~~-~~~~~~~Wp~~~h~i-GkDii~FH~i~wpamL~~~~~~~p~~v~~h-g~~-~~ 295 (644)
T PRK12267 233 LNYITAL-------------GYGSDD-DELFMKFWPADVHLV-GKDILRFHAIYWPIMLMALDLPLPKHLFAH-GWW-LM 295 (644)
T ss_pred CCHHHHH-------------CCCCCC-CHHHHHHCCHHHCCC-CCCHHHHHHHHHHHHHHHCCCCCCCEEECC-CEE-EC
T ss_conf 0034341-------------386212-266776373133026-855323668899999997699986445104-418-71
Q ss_pred HCCCCCCCCCC-CCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCC
Q ss_conf 01322122343-3024566629773779989985067666553011014677765202113755
Q gi|255764513|r 251 DKSKLSKRRNP-TSISYYSAMGYLPEALINFLALLFVHKSEDDDELMDMQQLIHHFDLHHLSKA 313 (492)
Q Consensus 251 ~g~klSKR~~~-~~i~~~~~~GylPeAilNyLalLGws~~~~d~Eifsl~eli~~FdL~~I~Ks 313 (492)
T Consensus 296 ~g~KmSKS~Gn~i~~~~~~~~-~g~D~lRyyl~~~~-~~~-~D~-dfs~~~f~~r~NsdL~n~l 355 (644)
T PRK12267 296 KDGKMSKSKGNVVDPEELVDR-YGLDALRYYLLREV-PFG-SDG-DFSPEAFVERINSDLANDL 355 (644)
T ss_pred CCCEECCCCCCEECHHHHHHH-CCCCCEEEEEEECC-CCC-CCC-CCCHHHHHHHHHHHHHHHH
T ss_conf 786005536842237999875-59404364644448-878-777-7899999999889988777