HHsearch alignment for GI: 255764513 and conserved domain: PRK12418
>PRK12418 cysteinyl-tRNA synthetase; Provisional.
Probab=98.93 E-value=7e-08 Score=73.81 Aligned_cols=224 Identities=17% Similarity=0.140 Sum_probs=135.9
Q ss_pred CCCCCCCCCCHHHHHHHHH-----HHHHHHHCCCEEEEEECCCCC---CCC----------CHHHHHHHHHHHHHCCCCC
Q ss_conf 4843388785015999999-----999999718849999704866---638----------8679999999988658988
Q gi|255764513|r 11 IAPSPTGEPHIGTAYTALF-----NYLIAKRTGGKFILRIEDTDS---KRS----------TLESENAVMQSLKWCGLNW 72 (492)
Q Consensus 11 faPsPtG~lH~G~~rtal~-----n~l~a~~~~g~f~lRieDtd~---~R~----------~~~~~~~i~~~l~wlgl~~ 72 (492)
T Consensus 15 CGPTVYd~~HiGhaRt~v~fD~l~R~L~~~gy~V~~v~NiTDVDDKii~~A~~~g~~~~ela~~~~~~f~~d~~~Lnv~~ 94 (384)
T PRK12418 15 CGITPYDATHLGHAATYLAFDLVQRVWLDAGHDVHYVQNVTDVDDPLLERAARDGVDWRDLAAREIALFREDMAALRVLP 94 (384)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 68868888542335168999999999998099649998105063899999998593999999999999999999829999
Q ss_pred -CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCEEE---------CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf -8676558876763232628999999999998898245---------148899977668876643100023665557883
Q gi|255764513|r 73 -DEGPDIGGAYGPYRQSERKNIYQPYVQNLLEKKLAFR---------CFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSS 142 (492)
Q Consensus 73 -De~~~~~g~~~p~~QS~r~~~y~~~~~~L~~~g~aY~---------c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~ 142 (492)
T Consensus 95 p~~~p---------raTe~I~~ii~~I~~Li~~G~AY~~~~~~~G~VYFdv~--------------~~~~Y-G~ls~~~~ 150 (384)
T PRK12418 95 PRDYV---------GAVESIPEVVELVEKLLASGAAYVVDDPEYGDVYFSVD--------------ATPQF-GYESGYDR 150 (384)
T ss_pred CCEEC---------CCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEC--------------CHHHH-CCCCCCCH
T ss_conf 95003---------21137999999999999679557756888886899952--------------42211-45015998
Q ss_pred HHHHHHHHC-CCCCEEEEEECCCCEEECCCCCCCCEECCCCCCCCCCEECC-------------CCCHHHHHHHHH----
Q ss_conf 330011202-57740788622431143047513402136432356410004-------------532489867887----
Q gi|255764513|r 143 QEIERLSQE-QKKHVVRLTVPNQGSCVFQDKVYGEMEIPWNAVDMQVLLKS-------------DGMPTYHLANVI---- 204 (492)
Q Consensus 143 ~e~~~~~~~-g~~~~iR~k~p~~~~~~~~D~i~G~~~~~~~~~~D~vi~r~-------------dg~ptY~~a~vv---- 204 (492)
T Consensus 151 ~~~~~~~~e~~~~~~-~---------------~~-----Kr~p~DFaLWK~~~~gEp~W~SPWG~GRPGWHIECSaMs~~ 209 (384)
T PRK12418 151 ETMLELFAERGGDPD-R---------------PG-----KRDPLDALLWRAARPGEPSWPSPFGPGRPGWHIECSAIALN 209 (384)
T ss_pred HHHHHHHHHCCCCCC-C---------------CC-----CCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 999877533157754-3---------------35-----78866603557577778887699888088430565899998
Q ss_pred ------HHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-HHC--CCHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHCCCCH
Q ss_conf ------644444443112235430247889999985-100--000101455531101322122343-3024566629773
Q gi|255764513|r 205 ------DDHLMKITHVARGEEWISSVPKHILLYQYF-NFP--IPEFIHLPLIKNPDKSKLSKRRNP-TSISYYSAMGYLP 274 (492)
Q Consensus 205 ------DD~~m~ithviRg~d~~~~t~~q~~l~~al-~~~--~p~f~H~pli~~~~g~klSKR~~~-~~i~~~~~~GylP 274 (492)
T Consensus 210 ~LG~~~DIHgGG~DL~FP---HHENEiAQs---ea~~g~~~~a~yW~H~g~l-~~~geKMSKSlGN~i~i~dl~~~g~~p 282 (384)
T PRK12418 210 RLGSGFDIQGGGSDLIFP---HHEFSAAHA---EAATGERRFARHYVHAGMI-GLDGEKMSKSRGNLVFVSRLRAAGVDP 282 (384)
T ss_pred HCCCCEEEECCCCCCCCC---CCHHHHHHH---HHHHCCCHHHHHHHHHCEE-EECCEECCCCCCCEEEHHHHHHCCCCH
T ss_conf 759976784686256588---835499999---9865897487888600426-688867456688714699998638987
Q ss_pred HHHHHHHHHCCC
Q ss_conf 779989985067
Q gi|255764513|r 275 EALINFLALLFV 286 (492)
Q Consensus 275 eAilNyLalLGw 286 (492)
T Consensus 283 ~~~R~~lL~~hY 294 (384)
T PRK12418 283 AAIRLALLAGHY 294 (384)
T ss_pred HHHHHHHHCCCC
T ss_conf 999999970567