HHsearch alignment for GI: 255764513 and conserved domain: pfam00749
>pfam00749 tRNA-synt_1c tRNA synthetases class I (E and Q), catalytic domain. Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only glutamyl and glutaminyl tRNA synthetases. In some organisms, a single glutamyl-tRNA synthetase aminoacylates both tRNA(Glu) and tRNA(Gln).
Probab=100.00 E-value=0 Score=868.43 Aligned_cols=310 Identities=46% Similarity=0.743 Sum_probs=300.7
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf 70563484338878501599999999999971884999970486663886799999999886589888676558876763
Q gi|255764513|r 6 KVRVRIAPSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIEDTDSKRSTLESENAVMQSLKWCGLNWDEGPDIGGAYGPY 85 (492)
Q Consensus 6 ~v~~RfaPsPtG~lH~G~~rtal~n~l~a~~~~g~f~lRieDtd~~R~~~~~~~~i~~~l~wlgl~~De~~~~~g~~~p~ 85 (492)
T Consensus 1 ~v~tRFAPSPTG~lHiG~~rtAl~n~l~Ar~~~G~fiLRIEDtD~~R~~~e~~~~I~~dL~wLGl~wDe--------~~~ 72 (314)
T pfam00749 1 KVRTRFAPSPTGYLHIGHARTALFNYLFAKNYNGKFILRFDDTDPEREKPEYEESILEDLKWLGIKWDE--------KPY 72 (314)
T ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC--------CCE
T ss_conf 924972889898644899999999999999809989999687898868768999999999995378998--------835
Q ss_pred ECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCC--CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 232628999999999998898245148899977668876643100--023665557883330011202577407886224
Q gi|255764513|r 86 RQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIP--SRYDGHCLKLSSQEIERLSQEQKKHVVRLTVPN 163 (492)
Q Consensus 86 ~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~--~~Y~~~~r~l~~~e~~~~~~~g~~~~iR~k~p~ 163 (492)
T Consensus 73 ~QS~r~~~Y~~~~~~L~~~g~aY~C~cs~~el~~~r~~~~~~~~~~~~~y~~~~~~l~~~~~~~~~~~~~~~~~R~k~~~ 152 (314)
T pfam00749 73 YQSDRFDIYYKYAEELIEKGLAYVCFCTPEELEEEREEQEALGSPERPRYDEECLRLFEEEMRKGEAEGGKATLRFKIPM 152 (314)
T ss_pred EHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHCCCCCCCCCEEEEECCC
T ss_conf 52020999999999999749952258999999999987763599989988322022799998615025887227885068
Q ss_pred CCEEECCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHH
Q ss_conf 31143047513402136432356410004532489867887644444443112235430247889999985100000101
Q gi|255764513|r 164 QGSCVFQDKVYGEMEIPWNAVDMQVLLKSDGMPTYHLANVIDDHLMKITHVARGEEWISSVPKHILLYQYFNFPIPEFIH 243 (492)
Q Consensus 164 ~~~~~~~D~i~G~~~~~~~~~~D~vi~r~dg~ptY~~a~vvDD~~m~ithviRg~d~~~~t~~q~~l~~al~~~~p~f~H 243 (492)
T Consensus 153 ~~~~~~~D~v~G~i~~~~~~~~D~vi~R~dg~ptY~lA~vVDD~~~~IThViRG~D~l~~T~~Q~~l~~aLg~~~P~y~H 232 (314)
T pfam00749 153 ESPYVMRDLVRGRIKFEPSALHDRTGLKWDGYPTYDFAVVIDDAIMGITHVLRGEEHLDNTPKQIWIYQALGWEVPPFIH 232 (314)
T ss_pred CCCEEEECCCCCEEEECHHHCCCCEEECCEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCEEE
T ss_conf 88626765766538844453886176446054565230587255688883756601001889999999963999985698
Q ss_pred HHHHHHHHCCCCCCCCCCCCH--HHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 455531101322122343302--456662977377998998506766655301101467776520211375544201565
Q gi|255764513|r 244 LPLIKNPDKSKLSKRRNPTSI--SYYSAMGYLPEALINFLALLFVHKSEDDDELMDMQQLIHHFDLHHLSKAGAVFDKQK 321 (492)
Q Consensus 244 ~pli~~~~g~klSKR~~~~~i--~~~~~~GylPeAilNyLalLGws~~~~d~Eifsl~eli~~FdL~~I~Ks~A~FD~eK 321 (492)
T Consensus 233 ~pli~~~~G~kLSKR~~~~~v~~~~~r~~g~~p~a~ln~L~~lG~s~~-~~~e~~~~~~l~~~F~l~~i~ks~~~fd~~k 311 (314)
T pfam00749 233 EYLRLNLDGTKLSKRKLSLSVFISQVKGWGDPPEALLNFLRRRGWTPE-GIREFFTREELIKSFDLNRVSKSLEAFDRKK 311 (314)
T ss_pred EEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHH-HHHHHCCHHHHHHHCCHHHCCCCCCCCCHHH
T ss_conf 870898999853372762103526334799961999999998699912-4214448999988579723258866478877
Q ss_pred HHH
Q ss_conf 566
Q gi|255764513|r 322 LDW 324 (492)
Q Consensus 322 L~w 324 (492)
T Consensus 312 L~~ 314 (314)
T pfam00749 312 LDW 314 (314)
T ss_pred CCC
T ss_conf 689