HHsearch alignment for GI: 255764513 and conserved domain: pfam01921
>pfam01921 tRNA-synt_1f tRNA synthetases class I (K). This family includes only lysyl tRNA synthetases from prokaryotes.
Probab=98.39 E-value=5.8e-06 Score=60.82 Aligned_cols=257 Identities=18% Similarity=0.199 Sum_probs=127.0
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHHHH-----HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 705634843388785015999999999999-----718849999704866638867999999998865898886765588
Q gi|255764513|r 6 KVRVRIAPSPTGEPHIGTAYTALFNYLIAK-----RTGGKFILRIEDTDSKRSTLESENAVMQSLKWCGLNWDEGPDIGG 80 (492)
Q Consensus 6 ~v~~RfaPsPtG~lH~G~~rtal~n~l~a~-----~~~g~f~lRieDtd~~R~~~~~~~~i~~~l~wlgl~~De~~~~~g 80 (492)
T Consensus 20 ~~v~~tG~~PSG~~HIGnfrEv~~~~~V~~al~~~g~~~~~i~~~DD~D~lRKVP~nlp~~e~~~~ylg~Pl~~IPdP~g 99 (355)
T pfam01921 20 EILVETGIGPSGLPHIGNFREVLRTDAVRRALRKRGFETRLIYFSDDMDGLRKVPDNVPNSEMLEKYLGKPLTRIPDPFG 99 (355)
T ss_pred CEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCC
T ss_conf 58995266899886421560179999999999974987699998215651013788999989998736975213479888
Q ss_pred CCCCEECCCCHHHHHHHHHHHHHCCCEEECCCCHHH-----------------HHHHHHHHH-HHHCC--C---CCCCCC
Q ss_conf 767632326289999999999988982451488999-----------------776688766-43100--0---236655
Q gi|255764513|r 81 AYGPYRQSERKNIYQPYVQNLLEKKLAFRCFCSTER-----------------LEEMRRAQR-KRNIP--S---RYDGHC 137 (492)
Q Consensus 81 ~~~p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~ee-----------------l~~~r~~~~-~~~~~--~---~Y~~~~ 137 (492)
T Consensus 100 ~~~Sya-~h~~~~~---~~~L~~~gi~~e-f~s~te~Y~sG~~~~~i~~~l~~~~~I~~Il~~~~g~e~~~~y~Pf~piC 174 (355)
T pfam01921 100 CHESYA-EHFNAPF---LEFLDRFGIEYE-FISATELYKSGLYDEAILIALENRDEIMEILLPYRGEERQETYSPFLPIC 174 (355)
T ss_pred CCCCHH-HHHHHHH---HHHHHHCCCEEE-EEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
T ss_conf 745599-9999999---999998398289-98678855246559999999985899999999852866688736898885
Q ss_pred CCCCHHHHHHHHHCCCCCEEEEEECCCCEEECCCC--CCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57883330011202577407886224311430475--1340213643235641000453248986788764444444311
Q gi|255764513|r 138 LKLSSQEIERLSQEQKKHVVRLTVPNQGSCVFQDK--VYGEMEIPWNAVDMQVLLKSDGMPTYHLANVIDDHLMKITHVA 215 (492)
Q Consensus 138 r~l~~~e~~~~~~~g~~~~iR~k~p~~~~~~~~D~--i~G~~~~~~~~~~D~vi~r~dg~ptY~~a~vvDD~~m~ithvi 215 (492)
T Consensus 175 ~~cGrv--------~~t~v~~~d~-~~~~v~Y~c~cG~~~~~~~~~g~--~KL~WkvD-W~mR-------W~~lgVdfEp 235 (355)
T pfam01921 175 PKCGRV--------LTTPVVEYDA-EGGTITYRCECGHEGEVDITGGN--GKLQWKVD-WAMR-------WAALGVDFEP 235 (355)
T ss_pred CCCCCE--------EEEEEEEEEC-CCCEEEEECCCCCEEEEEECCCC--CCCCCCCC-CHHE-------EEEECCEEEC
T ss_conf 888937--------2568999967-89879998699988998411576--66787566-3330-------5785634862
Q ss_pred CCCCCCC---HHHHHHHHH-HHHHHCCCHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHCCCCHHHHHHHHHHCCCCCC
Q ss_conf 2235430---247889999-985100000101455531101322122343-3024566629773779989985067666
Q gi|255764513|r 216 RGEEWIS---SVPKHILLY-QYFNFPIPEFIHLPLIKNPDKSKLSKRRNP-TSISYYSAMGYLPEALINFLALLFVHKS 289 (492)
Q Consensus 216 Rg~d~~~---~t~~q~~l~-~al~~~~p~f~H~pli~~~~g~klSKR~~~-~~i~~~~~~GylPeAilNyLalLGws~~ 289 (492)
T Consensus 236 ~GKDh~~~GGS~~~~~~I~~~i~g~~pP~~~~YE~~~~kgg~KmSsSkGn~is~~e~L~~~-~pE-~Lr~l~~-~~~P~ 311 (355)
T pfam01921 236 FGKDHAAPGGSYDTSSRIAREILGGEPPEPFPYELILLKGGGKMSSSKGNGITIEEWLEYA-PPE-SLRFLMF-RVKPK 311 (355)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHC-CHH-HHHHHHC-CCCCC
T ss_conf 5743246787622289999997099999988657899669971046889876999999866-999-9999980-42888