HHsearch results for GI: 255764513 and protein with PDBid: 1qtq_A
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A
Probab=100.00 E-value=0 Score=766.29 Aligned_cols=315 Identities=23% Similarity=0.263 Sum_probs=286.6
Q ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 87705634843388785015999999999999718849999704866638867999999998865898886765588767
Q gi|255764513|r 4 SSKVRVRIAPSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIEDTDSKRSTLESENAVMQSLKWCGLNWDEGPDIGGAYG 83 (492)
Q Consensus 4 ~~~v~~RfaPsPtG~lH~G~~rtal~n~l~a~~~~g~f~lRieDtd~~R~~~~~~~~i~~~l~wlgl~~De~~~~~g~~~ 83 (492)
.++|||||||||||+|||||||||||||+|||++||+|||||||||++|++++|++.|+++|+||||+||| +
T Consensus 24 ~~~v~tRFAPsPtG~LHiG~artAl~n~~~Ak~~~G~fiLRiEDTD~~R~~~e~~~~I~edL~WLGl~wDe--------~ 95 (553)
T 1qtq_A 24 HTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSG--------N 95 (553)
T ss_dssp CSSCEEEECCCTTSCCBHHHHHHHHHHHHHHHHTTCEEEEEECCCCGGGCCHHHHHHHHHHHHHTTCCCSS--------S
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC--------C
T ss_conf 88189965979897530899999999999999819989999788997647879999999999977998998--------8
Q ss_pred CEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC---CCCCEEEEE
Q ss_conf 63232628999999999998898245148899977668876643100023665557883330011202---577407886
Q gi|255764513|r 84 PYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSSQEIERLSQE---QKKHVVRLT 160 (492)
Q Consensus 84 p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~~e~~~~~~~---g~~~~iR~k 160 (492)
||+||+|+++|++++++|+++|+||+||||+|||++.|+.+.+.|.++.|++.|+..+.++.+..... ....++|++
T Consensus 96 ~~~QSer~~~Y~~~a~~Li~~G~AY~C~cs~eel~~~r~~~~~~g~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (553)
T 1qtq_A 96 VRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAK 175 (553)
T ss_dssp CEEGGGGHHHHHHHHHHHHHTTSEEEECCCHHHHHHHHCCSSSCCCCCTTTTCCHHHHHHHHHHHHTTCSCTTSCEEEEC
T ss_pred CEEHHHCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECC
T ss_conf 50221159999999999998699575578999999988778727999997764313677777887635777532675124
Q ss_pred ECC-CCEEECCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 224-3114304751340213643235641000453248986788764444444311223543024788999998510000
Q gi|255764513|r 161 VPN-QGSCVFQDKVYGEMEIPWNAVDMQVLLKSDGMPTYHLANVIDDHLMKITHVARGEEWISSVPKHILLYQYFNFPIP 239 (492)
Q Consensus 161 ~p~-~~~~~~~D~i~G~~~~~~~~~~D~vi~r~dg~ptY~~a~vvDD~~m~ithviRg~d~~~~t~~q~~l~~al~~~~p 239 (492)
++. .....+.|.+.+.+. ...+|+|+.|+||+||||||||||||+|||||||||+||++|||+|++||++|||+.|
T Consensus 176 ~d~~~~~~~~~d~~~~~~~---~~~~d~v~~k~dg~PtY~fA~vVDD~l~gITHViRG~D~l~st~~q~~l~~aLg~~~p 252 (553)
T 1qtq_A 176 IDMASPFIVMRDPVLYRIK---FAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVH 252 (553)
T ss_dssp SCTTCSSGGGSSCEEEEEC---CCCBTTTBTSCSEEECHHHHHHHHHHHTTCSEEEEEGGGTTTHHHHHHHHHTSCCSCC
T ss_pred CCCCCCCEEEECCEEEEEC---CCCCCCEEECCCCCCCCCHHCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCC
T ss_conf 4665464178888898850---4456525433545400000021557764797898510033466799999972478888
Q ss_pred HHHHHHHHHHHHCCCCCCCC----------------CCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 01014555311013221223----------------43302456662977377998998506766655301101467776
Q gi|255764513|r 240 EFIHLPLIKNPDKSKLSKRR----------------NPTSISYYSAMGYLPEALINFLALLFVHKSEDDDELMDMQQLIH 303 (492)
Q Consensus 240 ~f~H~pli~~~~g~klSKR~----------------~~~~i~~~~~~GylPeAilNyLalLGws~~~~d~Eifsl~eli~ 303 (492)
.|+|+|++++.+|++||||| +..+|.+||++||+||||+|||++||||++.++.|+++++++++
T Consensus 253 ~~~h~~l~l~~~~~~lskrhl~~~v~~~~~~~~d~~~~~ti~~~r~~G~~peAi~nfl~~lG~s~~~~~~e~~~l~~~~~ 332 (553)
T 1qtq_A 253 PRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIR 332 (553)
T ss_dssp CEEEEECCCCBTTSCCCHHHHHHHHHTTSSSCTTCTTSCBHHHHHHHTCCHHHHHHHHHHHCCCSSCCCBCHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 53776657535554320022420135777776668875028899886998699999999838788877304675999998
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 52021137554420156556643555
Q gi|255764513|r 304 HFDLHHLSKAGAVFDKQKLDWLNGRW 329 (492)
Q Consensus 304 ~FdL~~I~Ks~A~FD~eKL~wlN~qy 329 (492)
.|++++++|++|+||++||.|+|.+.
T Consensus 333 ~f~~~~~~r~~avfd~~kl~~~N~~~ 358 (553)
T 1qtq_A 333 EDLNENAPRAMAVIDPVKLVIENYQG 358 (553)
T ss_dssp HHHHHHSCEECEESSEEEEEBTTCCS
T ss_pred HHHHHCCCCHHEECCCCCCEEECCCC
T ss_conf 63341077100102654435772689