HHsearch results for GI: 255764513 and protein with PDBid: 2cyb_A
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus}
Probab=98.31 E-value=8.5e-06 Score=58.20 Aligned_cols=196 Identities=18% Similarity=0.198 Sum_probs=115.1
Q ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-----CCCC--CCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 5634843388785015999999999999718849999704-----8666--38867999999998865898886765588
Q gi|255764513|r 8 RVRIAPSPTGEPHIGTAYTALFNYLIAKRTGGKFILRIED-----TDSK--RSTLESENAVMQSLKWCGLNWDEGPDIGG 80 (492)
Q Consensus 8 ~~RfaPsPtG~lH~G~~rtal~n~l~a~~~~g~f~lRieD-----td~~--R~~~~~~~~i~~~l~wlgl~~De~~~~~g 80 (492)
-+=|. |||.|||||.- ++.+|....+.|...++=|-| +|.. .......+....++.-+|++.+..
T Consensus 36 y~G~~--PTg~lHLGh~v-~~~~~~~lq~~G~~~~~~i~D~~a~~~~~~~~~~~~~~~~~~~~~~~A~G~d~~k~----- 107 (323)
T 2cyb_A 36 YVGYE--PSGEIHLGHMM-TVQKLMDLQEAGFEIIVLLADIHAYLNEKGTFEEIAEVADYNKKVFIALGLDESRA----- 107 (323)
T ss_dssp EEEEC--CCSCCBHHHHH-HHHHHHHHHHTTCEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTCCTTTC-----
T ss_pred EEEEC--CCCCCHHHHHH-HHHHHHHHHHCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC-----
T ss_conf 98269--99846799999-99999999977990899934388763475759999989999999998538995555-----
Q ss_pred CCCCEECCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE
Q ss_conf 76763232628999999999998898245148899977668876643100023665557883330011202577407886
Q gi|255764513|r 81 AYGPYRQSERKNIYQPYVQNLLEKKLAFRCFCSTERLEEMRRAQRKRNIPSRYDGHCLKLSSQEIERLSQEQKKHVVRLT 160 (492)
Q Consensus 81 ~~~p~~QS~r~~~y~~~~~~L~~~g~aY~c~~t~eel~~~r~~~~~~~~~~~Y~~~~r~l~~~e~~~~~~~g~~~~iR~k 160 (492)
..|.||+-... .+++..|. |.++.-++...+.
T Consensus 108 --~i~~~S~~~~~-~~~~~~l~-------~~~~~~~l~~~~~-------------------------------------- 139 (323)
T 2cyb_A 108 --KFVLGSEYQLS-RDYVLDVL-------KMARITTLNRARR-------------------------------------- 139 (323)
T ss_dssp --EEEEGGGTTTS-HHHHHHHH-------HHHHHSBHHHHHH--------------------------------------
T ss_pred --EEEECCHHHHH-HHHHHHHH-------HHCCCCHHHHHHH--------------------------------------
T ss_conf --56876466667-89999998-------6534543888888--------------------------------------
Q ss_pred ECCCCEEECCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCH
Q ss_conf 22431143047513402136432356410004532489867887644444443112235430247889999985100000
Q gi|255764513|r 161 VPNQGSCVFQDKVYGEMEIPWNAVDMQVLLKSDGMPTYHLANVIDDHLMKITHVARGEEWISSVPKHILLYQYFNFPIPE 240 (492)
Q Consensus 161 ~p~~~~~~~~D~i~G~~~~~~~~~~D~vi~r~dg~ptY~~a~vvDD~~m~ithviRg~d~~~~t~~q~~l~~al~~~~p~ 240 (492)
+.|.+... . ++.. =|..+|-+--+.|=..++.++|+-|.|-..+--.-..+..-+|++.|.
T Consensus 140 --------~~~~~~~~-~------~~~~----~~~~~YP~lQa~D~~~~~~~~~~~G~DQ~~~~~l~r~~~~r~~~~~~~ 200 (323)
T 2cyb_A 140 --------SMDEVSRR-K------EDPM----VSQMIYPLMQALDIAHLGVDLAVGGIDQRKIHMLARENLPRLGYSSPV 200 (323)
T ss_dssp --------HTTTTCSC-S------SSCB----THHHHHHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHHHGGGGTCCCCE
T ss_pred --------HHHHHHCC-C------CCCC----CCEECCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEE
T ss_conf --------75332102-4------6777----320025632245676325544650320567889999999970787504
Q ss_pred HHHHHHHHHHHCCCCCCCCCCC-CHHHHHHCCCCHHHHHHHHHHC
Q ss_conf 1014555311013221223433-0245666297737799899850
Q gi|255764513|r 241 FIHLPLIKNPDKSKLSKRRNPT-SISYYSAMGYLPEALINFLALL 284 (492)
Q Consensus 241 f~H~pli~~~~g~klSKR~~~~-~i~~~~~~GylPeAilNyLalL 284 (492)
..|.|+|.+.+|+|+||-.+.. .+.+ .|+.|.+-+...
T Consensus 201 ~l~~p~l~~ldG~KmskS~~n~I~L~D------~pe~i~kKI~~a 239 (323)
T 2cyb_A 201 CLHTPILVGLDGQKMSSSKGNYISVRD------PPEEVERKIRKA 239 (323)
T ss_dssp EEEECCCBCTTSSBCCTTTTCSCBTTC------CHHHHHHHHHTS
T ss_pred EEECCCCCCCCCCCCCCCCCCEEECCC------CHHHHHHHHEEE
T ss_conf 761685237788635789988644237------858998866152