HHsearch alignment for GI: 255764514 and conserved domain: COG0178
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair].
Probab=97.09 E-value=0.012 Score=36.38 Aligned_cols=97 Identities=22% Similarity=0.190 Sum_probs=65.3
Q ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEECHHHHHHHCCCEEEEEEE
Q ss_conf 40621579999999998436689976998034468887999999999999730-59399980837986501761799996
Q gi|255764514|r 427 LASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSK-KIQLLAVTHAPQVAARADRHFLVYKT 505 (554)
Q Consensus 427 iaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~-~~Qvi~ITH~pqvAa~a~~h~~v~K~ 505 (554)
T Consensus 822 TLSGGEaQRvKLA~EL~k~~-tg~TlYiLDEPTTGLH~~Di~kLl~VL~rLvd~GnTViVIEHNLdVIk~AD~IIDLGPe 900 (935)
T COG0178 822 TLSGGEAQRVKLAKELSKRS-TGKTLYILDEPTTGLHFDDIKKLLEVLHRLVDKGNTVIVIEHNLDVIKTADWIIDLGPE 900 (935)
T ss_pred CCCCHHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCEEEECCCC
T ss_conf 66626999999999986346-89748996789878899999999999999984898799996366457526888972887
Q ss_pred ECCCCCCEEEEEEEECCHHHHHHHHHH
Q ss_conf 216875258999997598899999999
Q gi|255764514|r 506 NKPDDTQRIETYVAVLTPQERREEIAR 532 (554)
Q Consensus 506 ~~~~~~~~~~~~i~~l~~~~r~~Eiar 532 (554)
T Consensus 901 GG~~-GG---~iva~----GTPeeva~ 919 (935)
T COG0178 901 GGDG-GG---EIVAS----GTPEEVAK 919 (935)
T ss_pred CCCC-CC---EEEEE----CCHHHHHH
T ss_conf 7777-75---59995----18999973