HHsearch alignment for GI: 255764514 and conserved domain: COG0178

>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair].
Probab=97.09  E-value=0.012  Score=36.38  Aligned_cols=97  Identities=22%  Similarity=0.190  Sum_probs=65.3

Q ss_pred             HHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEECHHHHHHHCCCEEEEEEE
Q ss_conf             40621579999999998436689976998034468887999999999999730-59399980837986501761799996
Q gi|255764514|r  427 LASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSK-KIQLLAVTHAPQVAARADRHFLVYKT  505 (554)
Q Consensus       427 iaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~-~~Qvi~ITH~pqvAa~a~~h~~v~K~  505 (554)
T Consensus       822 TLSGGEaQRvKLA~EL~k~~-tg~TlYiLDEPTTGLH~~Di~kLl~VL~rLvd~GnTViVIEHNLdVIk~AD~IIDLGPe  900 (935)
T COG0178         822 TLSGGEAQRVKLAKELSKRS-TGKTLYILDEPTTGLHFDDIKKLLEVLHRLVDKGNTVIVIEHNLDVIKTADWIIDLGPE  900 (935)
T ss_pred             CCCCHHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCEEEECCCC
T ss_conf             66626999999999986346-89748996789878899999999999999984898799996366457526888972887


Q ss_pred             ECCCCCCEEEEEEEECCHHHHHHHHHH
Q ss_conf             216875258999997598899999999
Q gi|255764514|r  506 NKPDDTQRIETYVAVLTPQERREEIAR  532 (554)
Q Consensus       506 ~~~~~~~~~~~~i~~l~~~~r~~Eiar  532 (554)
T Consensus       901 GG~~-GG---~iva~----GTPeeva~  919 (935)
T COG0178         901 GGDG-GG---EIVAS----GTPEEVAK  919 (935)
T ss_pred             CCCC-CC---EEEEE----CCHHHHHH
T ss_conf             7777-75---59995----18999973