HHsearch alignment for GI: 255764514 and conserved domain: COG0497
>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair].
Probab=100.00 E-value=0 Score=1052.04 Aligned_cols=548 Identities=41% Similarity=0.647 Sum_probs=524.5
Q ss_pred CCEEEEECCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHH
Q ss_conf 92599942278999988738981899889997888999999987147325331128972589999997289737888887
Q gi|255764514|r 1 MTRLSIYNIVLIESLDIDFSAGLSILSGDTGSGKSILLDALILVTGGRGDGGLVRRHAEKGQVVAVFEISHLPALEILFA 80 (554)
Q Consensus 1 L~~L~i~Nf~~i~~~~i~f~~Gl~vItGetGaGKS~ildAl~~~lG~r~~~~~Ir~g~~~a~Ve~~F~~~~~~~~~~~~~ 80 (554)
T Consensus 2 L~~LsIknfaiIe~L~leF~~GltVlTGETGAGKSIiidAl~lllG~ra~~~~VR~G~~~a~v~a~F~~~-~~~~~~~L~ 80 (557)
T COG0497 2 LLELSIKNFAIIEELELEFEKGLTVLTGETGAGKSIIIDALGLLLGGRADASLVRHGAKRAEVEAIFDLD-NPPARAWLE 80 (557)
T ss_pred CCEEEEEHEEEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEEEECCC-CHHHHHHHH
T ss_conf 7377450100102122410689568656888756679989999727877811211788606899985479-668899999
Q ss_pred HCCCCCCCCEEEEEEEECCCCEEEEECCEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH-HHH
Q ss_conf 4789888838999999438977999999884101122211100000122000000003678777766300001389-999
Q gi|255764514|r 81 EANLTLEKHVILRRVQFPDGRTKAYVNDQVVSVNFMRAVGSLLIEIHSQHADRSLLDVQGHRKILDSYADIDLSLC-ELG 159 (554)
Q Consensus 81 ~~~~~~~~~~iirR~i~~~GkS~~~INg~~v~~~~L~~l~~~lidi~gQ~e~~~Ll~~~~q~~lLD~~~~~~~~~~-~~~ 159 (554)
T Consensus 81 e~gie~~~~iilrR~i~~~GrSr~~INg~~Vs~~~L~~l~~~Li~IHGQh~~q~Ll~~~~~r~lLD~f~~~~~~~~~~~~ 160 (557)
T COG0497 81 ENGIEDDEEVILRRVISADGRSRAFINGQPVSLAQLKELGQLLIDIHGQHEHQSLLKPELQRQLLDAFAGLEELAQEAYQ 160 (557)
T ss_pred HCCCCCCCCEEEEEEECCCCCEEEEECCEEEEHHHHHHHHHHHEEEECCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 75999767579998872778616889999830999999997660122663177761948899999874575578999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC--
Q ss_conf 9999999999888776655-5543344443321100000234433467778889862000123210234555320010--
Q gi|255764514|r 160 TLYRHWCCTADALKKYQEQ-KSSSQDVEFLRFSIDELQALAVQPGEENELVVMRSKILKQERIAVELSSIMDDFHKSS-- 236 (554)
Q Consensus 160 ~~~~~~~~~~~~l~~l~~~-~~~~~e~e~l~~ql~El~~~~l~~~E~e~L~~~~~~l~~~e~l~~~l~~~~~~l~~~~-- 236 (554)
T Consensus 161 ~~y~~w~~~~~~l~~~~~~~~e~~~~~d~L~fq~~Ele~~~l~~gE~e~L~~e~~rLsn~ekl~~~~~~a~~~L~ge~~~ 240 (557)
T COG0497 161 EAYQAWKQARRELEDLQEKERERAQRADLLQFQLEELEELNLQPGEDEELEEERKRLSNSEKLAEAIQNALELLSGEDDT 240 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999879999999999999999997369999659999999999755899999999999997178874
Q ss_pred -CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf -0179999999865431001100136676422210010799999998753000148764012356667888878762011
Q gi|255764514|r 237 -SPISVISSMLRRLERKSTEVPDLLQKSISFLNEAQENLSDAQHEIERSFSEIQYDAQELANIEERLFALRAMSRKYSVS 315 (554)
Q Consensus 237 -~~l~~l~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~e~~~el~~~~~~le~~~~~L~~ie~Rl~~l~~L~rK~~~~ 315 (554)
T Consensus 241 ~~~~~~l~~a~~~l~~-~~~~d~~l~~~~~~l~ea~~~l~ea~~el~~~~~~le~Dp~~L~~ve~Rl~~L~~l~RKY~~~ 319 (557)
T COG0497 241 VSALSLLGRALEALED-LSEYDGKLSELAELLEEALYELEEASEELRAYLDELEFDPNRLEEVEERLFALKSLARKYGVT 319 (557)
T ss_pred HHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 3589999999999987-630576689999999999999999999999987437889899999999999999999870999
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
Q ss_conf 15688875200002666443345777778888876765211136678999999988899999766652025633786520
Q gi|255764514|r 316 IDQLPELAKKMEEDLADISEGNEKVVSLERVLYEARQAYDRVAQDISTKRYQFAKMLEKNVMAEMPALKLENVCFTVNIT 395 (554)
Q Consensus 316 ~eel~~~~~~l~~~l~~l~~~~~~l~~l~~~~~~~~~~l~~~a~~Ls~~R~~~a~~L~~~i~~~L~~L~m~~a~f~i~~~ 395 (554)
T Consensus 320 ~~~l~~~~~~~~~el~~L~~~~~~~~~Le~~~~~l~~~~~~~A~~Ls~~R~~~A~~L~~~v~~eL~~L~Me~a~F~ve~~ 399 (557)
T COG0497 320 IEDLLEYLDKIKEELAQLDNSEESLEALEKEVKKLKAELLEAAEALSAIRKKAAKELEKEVTAELKALAMEKARFTVELK 399 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 88999999999999998553066899999999999999999999998999999999999999998860688865899962
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 25322344654320011012789983113544062157999999999843668997699803446888799999999999
Q gi|255764514|r 396 SDKEDISPDGIDRVEFYVQTNRGENPGPLMKLASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLK 475 (554)
Q Consensus 396 ~~~~~~~~~G~d~v~f~~s~n~g~~~~pl~kiaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~ 475 (554)
T Consensus 400 ~~~~~~t~~G~d~VeF~istNpG~~~~pL~KvASGGELSRimLAlk~i~~~~~~~ptlIFDEVD~GIsG~~A~aVg~~L~ 479 (557)
T COG0497 400 PLEESPTADGADKVEFLISTNPGEPLKPLAKVASGGELSRIMLALKVILSRKDDTPTLIFDEVDTGISGRVAQAVGKKLR 479 (557)
T ss_pred CCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 48877776775218999737999998407765353179999999999971668998599746457997599999999999
Q ss_pred HHHHCCCEEEEECHHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
Q ss_conf 973059399980837986501761799996216875258999997598899999999866880028999999988735
Q gi|255764514|r 476 QLSKKIQLLAVTHAPQVAARADRHFLVYKTNKPDDTQRIETYVAVLTPQERREEIARMLAGSHITEEARAAAEILLEF 553 (554)
Q Consensus 476 ~ls~~~Qvi~ITH~pqvAa~a~~h~~v~K~~~~~~~~~~~~~i~~l~~~~r~~Eiarml~g~~~~~~~~~~A~~ll~~ 553 (554)
T Consensus 480 ~Ls~~~QVl~VTHlPQVAa~ad~H~~V~K~~~~~---~T~s~V~~L~~eeRveEiARMl~G~~iT~~a~a~AkeLL~~ 554 (557)
T COG0497 480 RLSEHHQVLCVTHLPQVAAMADTHFLVEKESEDG---RTESRVRPLDKEERVEEIARMLGGSEVTDEALAHAKELLAA 554 (557)
T ss_pred HHHCCCEEEEEECHHHHHHHHCCEEEEEEECCCC---CEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 9836964999935787875202558999724788---26776353887678999999856843149999999999975