HHsearch alignment for GI: 255764514 and conserved domain: COG4618
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].
Probab=97.69 E-value=0.00047 Score=45.67 Aligned_cols=93 Identities=24% Similarity=0.344 Sum_probs=66.6
Q ss_pred HCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH-HHCCCEEEEECHHHHHHHCCCEEEEEEEE
Q ss_conf 06215799999999984366899769980344688879999999999997-30593999808379865017617999962
Q gi|255764514|r 428 ASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQL-SKKIQLLAVTHAPQVAARADRHFLVYKTN 506 (554)
Q Consensus 428 aSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~l-s~~~Qvi~ITH~pqvAa~a~~h~~v~K~~ 506 (554)
T Consensus 473 LSgGQRQRIaLARAl----YG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~--- 545 (580)
T COG4618 473 LSGGQRQRIALARAL----YGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQ--- 545 (580)
T ss_pred CCCHHHHHHHHHHHH----CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEC---
T ss_conf 772378999999997----0897089955898776526799999999999976987999926777885155344223---
Q ss_pred CCCCCCEEEEEEEECCHHHHHHHHHHHHCCC
Q ss_conf 1687525899999759889999999986688
Q gi|255764514|r 507 KPDDTQRIETYVAVLTPQERREEIARMLAGS 537 (554)
Q Consensus 507 ~~~~~~~~~~~i~~l~~~~r~~Eiarml~g~ 537 (554)
T Consensus 546 -~G---~----~~--~FG~r~eVLa~~~~~~ 566 (580)
T COG4618 546 -DG---R----IA--AFGPREEVLAKVLRPP 566 (580)
T ss_pred -CC---H----HH--HCCCHHHHHHHHCCCC
T ss_conf -88---4----77--4197789999852788