HHsearch alignment for GI: 255764514 and conserved domain: PRK10869
>PRK10869 recombination and repair protein; Provisional.
Probab=100.00 E-value=0 Score=1078.96 Aligned_cols=549 Identities=31% Similarity=0.506 Sum_probs=523.7
Q ss_pred CCEEEEECCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHH
Q ss_conf 92599942278999988738981899889997888999999987147325331128972589999997289737888887
Q gi|255764514|r 1 MTRLSIYNIVLIESLDIDFSAGLSILSGDTGSGKSILLDALILVTGGRGDGGLVRRHAEKGQVVAVFEISHLPALEILFA 80 (554)
Q Consensus 1 L~~L~i~Nf~~i~~~~i~f~~Gl~vItGetGaGKS~ildAl~~~lG~r~~~~~Ir~g~~~a~Ve~~F~~~~~~~~~~~~~ 80 (554)
T Consensus 2 L~~L~I~n~alI~~~~l~f~~Gl~viTGETGAGKSill~al~lllG~ra~~~~ir~g~~~a~vea~F~~~~~~~~~~~l~ 81 (553)
T PRK10869 2 LAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEASMVRPGATRADLCARFSLKDTPAALRWLE 81 (553)
T ss_pred CCEEEEEEEEEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHH
T ss_conf 87399830587898999769998687789998799999999998488988464669997599999997288757899998
Q ss_pred HCCCCCCCCEEEEEEEECCCCEEEEECCEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 47898888389999994389779999998841011222111000001220000000036787777663000013899999
Q gi|255764514|r 81 EANLTLEKHVILRRVQFPDGRTKAYVNDQVVSVNFMRAVGSLLIEIHSQHADRSLLDVQGHRKILDSYADIDLSLCELGT 160 (554)
Q Consensus 81 ~~~~~~~~~~iirR~i~~~GkS~~~INg~~v~~~~L~~l~~~lidi~gQ~e~~~Ll~~~~q~~lLD~~~~~~~~~~~~~~ 160 (554)
T Consensus 82 ~~~~~~~~eliirR~i~~~GrSr~~INg~~vt~~~Lk~l~~~LidIHgQhe~q~Ll~~~~q~~lLD~f~~~~~l~~~~~~ 161 (553)
T PRK10869 82 DNQLEDGNECLLRRVISSDGRSRGFINGTPVPLSQLRELGQLLIQIHGQHAHQLLLKPEHQKTLLDSYANHTSLLQEMAA 161 (553)
T ss_pred HCCCCCCCCEEEEEEECCCCCEEEEECCEECCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 56999888579999986899658999999856999999999999985236678770832589999863486999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC--CCC
Q ss_conf 999999999888776655-55433444433211000002344334677788898620001232102345553200--100
Q gi|255764514|r 161 LYRHWCCTADALKKYQEQ-KSSSQDVEFLRFSIDELQALAVQPGEENELVVMRSKILKQERIAVELSSIMDDFHK--SSS 237 (554)
Q Consensus 161 ~~~~~~~~~~~l~~l~~~-~~~~~e~e~l~~ql~El~~~~l~~~E~e~L~~~~~~l~~~e~l~~~l~~~~~~l~~--~~~ 237 (554)
T Consensus 162 ~y~~~~~~~~~l~~l~~~~~~~~~~~d~L~~ql~Ei~~~~l~~gE~eeL~~e~~~L~n~e~i~~~~~~~~~~L~~~e~~~ 241 (553)
T PRK10869 162 AYQLWHQSCRDLAQLQQQSQERAARKQLLQYQLKELNEFAPQPGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEEVN 241 (553)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 99999999999999999899999999999999999985699997099999999998669999999999998751787202
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 17999999986543100110013667642221001079999999875300014876401235666788887876201115
Q gi|255764514|r 238 PISVISSMLRRLERKSTEVPDLLQKSISFLNEAQENLSDAQHEIERSFSEIQYDAQELANIEERLFALRAMSRKYSVSID 317 (554)
Q Consensus 238 ~l~~l~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~e~~~el~~~~~~le~~~~~L~~ie~Rl~~l~~L~rK~~~~~e 317 (554)
T Consensus 242 ~~~~L~~~~~~l~~-l~~~d~~l~~~~e~l~~a~~~l~e~~~~L~~~~~~le~Dp~~Le~ie~RL~~i~~L~RKyg~~~e 320 (553)
T PRK10869 242 ILSQLYTAKQLVSE-LVGMDSKLSGVLDMLEEALIQIQEASDELRHYLDRLDLDPNRLFELEQRLSKQISLARKHHVSPE 320 (553)
T ss_pred HHHHHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999-87458668999999999999999999999999873568847689999999999999988399999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
Q ss_conf 68887520000266644334577777888887676521113667899999998889999976665202563378652025
Q gi|255764514|r 318 QLPELAKKMEEDLADISEGNEKVVSLERVLYEARQAYDRVAQDISTKRYQFAKMLEKNVMAEMPALKLENVCFTVNITSD 397 (554)
Q Consensus 318 el~~~~~~l~~~l~~l~~~~~~l~~l~~~~~~~~~~l~~~a~~Ls~~R~~~a~~L~~~i~~~L~~L~m~~a~f~i~~~~~ 397 (554)
T Consensus 321 eLl~~~~~l~~eL~~l~~~~~~l~~L~~~~~~~~~~~~~~A~~Ls~~R~~aA~~L~~~I~~~L~~L~M~~a~F~i~i~~~ 400 (553)
T PRK10869 321 ELPQHHQSLLEEQQQLDDQEDKLETLALAVEKHHQQALETARKLHQSRQRYAKELAKLITQSMHELSMPHGKFTIDVKFD 400 (553)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
T ss_conf 99999999999998630879999999999999999999999999999999999999999999860299974899999617
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 32234465432001101278998311354406215799999999984366899769980344688879999999999997
Q gi|255764514|r 398 KEDISPDGIDRVEFYVQTNRGENPGPLMKLASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQL 477 (554)
Q Consensus 398 ~~~~~~~G~d~v~f~~s~n~g~~~~pl~kiaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~l 477 (554)
T Consensus 401 ~~~~~~~G~d~vefl~s~N~G~~~~pL~kiASGGElSRimLAlk~v~a~~~~~~tlIFDEID~GigG~~a~~vg~~L~~l 480 (553)
T PRK10869 401 EHHLSADGADRIEFRVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL 480 (553)
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 66789998638999995289999761777636608999999999997057999828985788899879999999999998
Q ss_pred HHCCCEEEEECHHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
Q ss_conf 3059399980837986501761799996216875258999997598899999999866880028999999988735
Q gi|255764514|r 478 SKKIQLLAVTHAPQVAARADRHFLVYKTNKPDDTQRIETYVAVLTPQERREEIARMLAGSHITEEARAAAEILLEF 553 (554)
Q Consensus 478 s~~~Qvi~ITH~pqvAa~a~~h~~v~K~~~~~~~~~~~~~i~~l~~~~r~~Eiarml~g~~~~~~~~~~A~~ll~~ 553 (554)
T Consensus 481 s~~~QVi~ITHlpQvAa~ad~H~~V~K~~~~~---~t~t~i~~L~~~eRv~EiARMlsG~~it~~al~~A~eLL~a 553 (553)
T PRK10869 481 GESTQVMCVTHLPQVAGCGHQHMFVSKETDGG---MTETHMQPLDKKARLQELARLLGGSEVTRNTLANAKELLAA 553 (553)
T ss_pred HCCCEEEEECCHHHHHHCCCCEEEEEEECCCC---EEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
T ss_conf 52987999803699985448778999973798---26898788984079999999847998769999999998659